BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 047992
         (868 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Vitis vinifera]
          Length = 1545

 Score = 1132 bits (2928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/848 (65%), Positives = 672/848 (79%)

Query: 8   TFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQAC 67
           +F ++H  LT K  P+  D HL+ LC NGRL +AI  LD+IA  G+ V+ NTY+ LLQ+C
Sbjct: 36  SFTKIHQPLTPKLKPKVTDAHLNHLCKNGRLADAIACLDAIAQGGSNVKPNTYMQLLQSC 95

Query: 68  IDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSA 127
           ID  S  L RKLHA + L+ E++ FV+TKL+S+YAKCG L +AR+VF +MRERNLY WSA
Sbjct: 96  IDQGSAELGRKLHARIGLLEEMNPFVETKLVSMYAKCGSLGEARKVFGEMRERNLYAWSA 155

Query: 128 MIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
           MIGAYSR+Q WREVV+ FF M++DG+ PD+FL PKILQACGNCGD E GKL+HSLVI+ G
Sbjct: 156 MIGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCG 215

Query: 188 MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
           M+   RV NS+LAVY KCG+L  ARRFFE+MD +D V+WNS+I+GY Q GE +++H+LF+
Sbjct: 216 MNFNIRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFE 275

Query: 248 KMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
           KM  E I+ G+VT+NILI SY+Q G+CD AME++K+MES  I PDVFTWT MISGFAQN 
Sbjct: 276 KMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKMESFRIVPDVFTWTSMISGFAQNN 335

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
           R SQAL+LF+EM   G+ PNGVT+TS ISAC  LKAL  GME+HS+AVK+G  +D+LVGN
Sbjct: 336 RRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGN 395

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           SLI+MYSK  ELE A RVFDMI  KDVY+WNSMI GYCQAGYCGKAY+LFIKM ESDVPP
Sbjct: 396 SLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPP 455

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           NV+TWN +ISGYIQNG+ED+A+DLF RM K+  +KR+TASWNSLIAGY Q G KN ALG+
Sbjct: 456 NVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGI 515

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           FR+MQS C  PN VT+LS+LPACA LVA+ KVKEIHGC+LRR+L S L V N LIDTYAK
Sbjct: 516 FRQMQSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAK 575

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
           SGNIVY++TIF G+SSKDII+WNSLI GYVLHG   +ALDLFDQM   G+KP+RGTFLSI
Sbjct: 576 SGNIVYAQTIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSI 635

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           I A SL+GMVD GK+VF S+ E YQI+P +EH+SAMIDL GRSGKL EA+EFIEDM IEP
Sbjct: 636 IYAFSLSGMVDKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEP 695

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           DS IW ALLTA +IHGNI LA+ A E L +LEP +  I + ILQ+YA+ GK ED  K+RK
Sbjct: 696 DSCIWAALLTASKIHGNIGLAIRAGECLLELEPSNFSIHQQILQMYALSGKFEDVSKLRK 755

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCI 787
            E+ +  +   G  WIE KN+V+TFV    S  Y D L+SW++NV   V A   H  L I
Sbjct: 756 SEKRSETKQPLGCSWIEAKNIVHTFVADDRSRPYFDFLHSWIENVARKVKAPDQHDRLFI 815

Query: 788 EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIF 847
           EEEEKEEI G+HSEKLALAFALI  S AP ++RIVKN+RMC  CH TAK++SM++ CEI+
Sbjct: 816 EEEEKEEIGGVHSEKLALAFALIDPSCAPRSVRIVKNLRMCGDCHGTAKFLSMLYSCEIY 875

Query: 848 LADSKCLH 855
           L+DSKCLH
Sbjct: 876 LSDSKCLH 883


>gi|449470126|ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Cucumis sativus]
          Length = 1463

 Score = 1073 bits (2774), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/831 (62%), Positives = 646/831 (77%), Gaps = 3/831 (0%)

Query: 15  LLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIH 74
             T K   +F D HL +LC NG L EAIT +DSI+ +G+K+  NTYINLLQ CID  SI 
Sbjct: 38  FFTYKLTSKFNDDHLSYLCSNGLLREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIE 97

Query: 75  LARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
           L R+LH  + LV  ++ FV+TKL+S+YAKCGCL DAR+VF+ M+ERNLYTWSAMIGAYSR
Sbjct: 98  LGRELHVRMGLVHRVNPFVETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSR 157

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
           +QRW+EVVELFFLM+ DG+ PD FLFPKILQACGNC D E  KL+HSLVI+ G+SC  R+
Sbjct: 158 EQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRL 217

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
            NS+L  +VKCGKL  AR+FF +MDE+DGV+WN MI+GY Q G  DEA RL D M  +  
Sbjct: 218 SNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGF 277

Query: 255 KLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
           K G+VT+NI+I SY+QLG CD+ +++ K+MES+G+ PDV+TWT MISGF+Q+ R SQALD
Sbjct: 278 KPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALD 337

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
            FK+M   GV PN +TI SA SAC  LK+L  G+EIH  A+KMG   + LVGNSLI+MYS
Sbjct: 338 FFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYS 397

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           KC +LEAA  VFD I +KDVY+WNSMI GYCQAGY GKAYELF++++ES V PNV+TWN 
Sbjct: 398 KCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNA 457

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           +ISG IQNG+ED+A+DLFQ M K+  VKRNTASWNSLIAGY QLG+KN AL +FR+MQS 
Sbjct: 458 MISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSL 517

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
            F PN VTILS+LPACA ++A  K+KEIHGCVLRR+LES L V NSL+DTYAKSGNI YS
Sbjct: 518 NFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYS 577

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           RT+F+GMSSKDIITWNS+I GY+LHG   +A  LFDQM++ G++PNRGT  SII A+ +A
Sbjct: 578 RTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIA 637

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           GMVD G+ VF SITE +QI+P ++HY AM+DLYGRSG+L +A+EFIEDMPIEPD SIW +
Sbjct: 638 GMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTS 697

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           LLTACR HGN++LAVLA +RL +LEP + +I RL++Q YA+ GK E  LKVRKL +E+  
Sbjct: 698 LLTACRFHGNLNLAVLAAKRLHELEPDNHVIYRLLVQAYALYGKFEQTLKVRKLGKESAM 757

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-IEEEEKE 793
           +    QCW+EV+N V+ FVTG   +S  D+L +W++++   V   ++H  L   EEE++E
Sbjct: 758 KKCTAQCWVEVRNKVHLFVTG--DQSKLDVLNTWIKSIEGKVKKFNNHHQLSIEEEEKEE 815

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
           +I G H EK A AF LIGSS    +I+IVKN+RMCV CH+ AKY+S  + C
Sbjct: 816 KIGGFHCEKFAFAFGLIGSSHTRKSIKIVKNLRMCVDCHQMAKYISAAYEC 866


>gi|30686506|ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g19720; AltName: Full=Protein DYW7
 gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein [Arabidopsis thaliana]
 gi|332191770|gb|AEE29891.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 894

 Score = 1070 bits (2768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 517/856 (60%), Positives = 652/856 (76%), Gaps = 3/856 (0%)

Query: 16  LTKKSNPRF-RDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIH 74
            TKK  P    D   D+LC NG L EA   LDS+  QG+KV+R+TY+ LL++CIDS SIH
Sbjct: 39  FTKKKEPNIIPDEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIH 98

Query: 75  LARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
           L R LHA   L TE DVFV+TKLLS+YAKCGC+ DAR+VF+ MRERNL+TWSAMIGAYSR
Sbjct: 99  LGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSR 158

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
           + RWREV +LF LM++DG+ PDDFLFPKILQ C NCGD EAGK++HS+VIKLGMS   RV
Sbjct: 159 ENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRV 218

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
            NS+LAVY KCG+L +A +FF  M E+D +AWNS++  Y Q G+++EA  L  +M +E I
Sbjct: 219 SNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGI 278

Query: 255 KLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
             G+VT+NILI  YNQLG+CD AM+++++ME+ GIT DVFTWT MISG   NG   QALD
Sbjct: 279 SPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALD 338

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
           +F++M   GV+PN VTI SA+SAC+ LK +  G E+HS+AVKMGF DDVLVGNSL++MYS
Sbjct: 339 MFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYS 398

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           KC +LE A +VFD +K+KDVY+WNSMI GYCQAGYCGKAYELF +MQ++++ PN+ITWN 
Sbjct: 399 KCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNT 458

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           +ISGYI+NG+E EA+DLFQRM K+ KV+RNTA+WN +IAGY Q G+K+ AL +FRKMQ S
Sbjct: 459 MISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFS 518

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
            F PN VTILS+LPACA L+ +  V+EIHGCVLRR+L++   V N+L DTYAKSG+I YS
Sbjct: 519 RFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYS 578

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           RTIF GM +KDIITWNSLI GYVLHG +  AL LF+QMK+ G+ PNRGT  SIILAH L 
Sbjct: 579 RTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLM 638

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G VD GKKVF SI   Y IIP +EH SAM+ LYGR+ +LEEA++FI++M I+ ++ IWE+
Sbjct: 639 GNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWES 698

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
            LT CRIHG+ID+A+ A E LF LEP +   + ++ QIYA+  K   +L+  K  R+N  
Sbjct: 699 FLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLL 758

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSG-LCIEEEEKE 793
           +   GQ WIEV+NL++TF TG  S+  +D+LY  ++ +         ++G L IEEE +E
Sbjct: 759 KKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGELWIEEEGRE 818

Query: 794 EISGIHSEKLALAFALIGSSQAPH-TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
           E  GIHSEK A+AF LI SS A   TIRI+KN+RMC  CH+TAKYVS  + C+I L D++
Sbjct: 819 ETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTR 878

Query: 853 CLHHFKNGQCSCGDYW 868
           CLHHFKNG CSC DYW
Sbjct: 879 CLHHFKNGDCSCKDYW 894


>gi|449523327|ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score = 1038 bits (2685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 502/808 (62%), Positives = 628/808 (77%), Gaps = 3/808 (0%)

Query: 15  LLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIH 74
             T K   +F D HL +LC NG L EAIT +DSI+ +G+K+  NTYINLLQ CID  SI 
Sbjct: 38  FFTYKLTSKFNDDHLSYLCSNGLLREAITAIDSISKRGSKLSTNTYINLLQTCIDVGSIE 97

Query: 75  LARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
           L R+LH  + LV  ++ FV+TKL+S+YAKCGCL DAR+VF+ M+ERNLYTWSAMIGAYSR
Sbjct: 98  LGRELHVRMGLVHRVNPFVETKLVSMYAKCGCLKDARKVFDGMQERNLYTWSAMIGAYSR 157

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
           +QRW+EVVELFFLM+ DG+ PD FLFPKILQACGNC D E  KL+HSLVI+ G+SC  R+
Sbjct: 158 EQRWKEVVELFFLMMGDGVLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRL 217

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
            NS+L  +VKCGKL  AR+FF +MDE+DGV+WN MI+GY Q G  DEA RL D M  +  
Sbjct: 218 SNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGF 277

Query: 255 KLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
           K G+VT+NI+I SY+QLG CD+ +++ K+MES+G+ PDV+TWT MISGF+Q+ R SQALD
Sbjct: 278 KPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALD 337

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
            FK+M   GV PN +TI SA SAC  LK+L  G+EIH  A+KMG   + LVGNSLI+MYS
Sbjct: 338 FFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDMYS 397

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           KC +LEAA  VFD I +KDVY+WNSMI GYCQAGY GKAYELF++++ES V PNV+TWN 
Sbjct: 398 KCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTWNA 457

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           +ISG IQNG+ED+A+DLFQ M K+  VKRNTASWNSLIAGY QLG+KN AL +FR+MQS 
Sbjct: 458 MISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAGYHQLGEKNKALAIFRQMQSL 517

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
            F PN VTILS+LPACA ++A  K+KEIHGCVLRR+LES L V NSL+DTYAKSGNI YS
Sbjct: 518 NFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESELAVANSLVDTYAKSGNIKYS 577

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           RT+F+GMSSKDIITWNS+I GY+LHG   +A  LFDQM++ G++PNRGT  SII A+ +A
Sbjct: 578 RTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRNLGIRPNRGTLASIIHAYGIA 637

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           GMVD G+ VF SITE +QI+P ++HY AM+DLYGRSG+L +A+EFIEDMPIEPD SIW +
Sbjct: 638 GMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLADAIEFIEDMPIEPDVSIWTS 697

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           LLTACR HGN++LAVLA +RL +LEP + +I RL++Q YA+ GK E  LKVRKL +E+  
Sbjct: 698 LLTACRFHGNLNLAVLAAKRLHELEPDNHVIYRLLVQAYALYGKFEQTLKVRKLGKESAM 757

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-IEEEEKE 793
           +    QCW+EV+N V+ FVTG   +S  D+L +W++++   V   ++H  L   EEE++E
Sbjct: 758 KKCTAQCWVEVRNKVHLFVTG--DQSKLDVLNTWIKSIEGKVKKFNNHHQLSIEEEEKEE 815

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRI 821
           +I G H EK A AF LIGSS    +I+I
Sbjct: 816 KIGGFHCEKFAFAFGLIGSSHTRKSIKI 843


>gi|297850366|ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338906|gb|EFH69323.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1490

 Score = 1038 bits (2684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/824 (61%), Positives = 635/824 (77%), Gaps = 3/824 (0%)

Query: 16  LTKKSNPRF-RDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIH 74
            TKK  P    D  LD+LC NG L EA   LDS+  QG+KV+R+TY+NLL++CIDS SIH
Sbjct: 39  FTKKKEPNIIPDEQLDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLNLLESCIDSGSIH 98

Query: 75  LARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
           L R LHA   L  E DVFV+TKLLS+YAKCGCL DAR+VF+ MRERNLYTWSAMIGAYSR
Sbjct: 99  LGRILHARFGLFPEPDVFVETKLLSMYAKCGCLVDARKVFDSMRERNLYTWSAMIGAYSR 158

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
           + RWREV +LF LM+++G+ PDDFLFPKILQ C NCGD E GKL+HS+VIKLGMS   RV
Sbjct: 159 ENRWREVSKLFRLMMEEGVLPDDFLFPKILQGCANCGDVETGKLIHSVVIKLGMSSCLRV 218

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
            NS+LAVY KCG+  +A +FF  M E+D VAWNS++  Y Q G+++EA  L ++M +E I
Sbjct: 219 SNSILAVYAKCGEWDFATKFFRRMKERDVVAWNSVLLAYCQNGKHEEAVELVEEMEKEGI 278

Query: 255 KLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
             G+VT+NILI  YNQLG+CD AM+++++ME+ GIT DVFTWT MISG   NG   QALD
Sbjct: 279 SPGLVTWNILIGGYNQLGKCDAAMDLMQKMENFGITADVFTWTAMISGLIHNGMRYQALD 338

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
           +F++M   GV+PN VTI SA+SAC+ LK + +G E+HS+AVKMGF DDVLVGNSL++MYS
Sbjct: 339 MFRKMFLAGVVPNAVTIMSAVSACSYLKVINLGSEVHSIAVKMGFIDDVLVGNSLVDMYS 398

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           KC +LE A +VFD +K+KDVY+WNSMI GYCQAGYCGKAYELF +MQ+++V PN+ITWN 
Sbjct: 399 KCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANVRPNIITWNT 458

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           +ISGYI+NG+E EA+DLFQRM K+ KV+RNTA+WN +IAGY Q G+K++AL +FRKMQ S
Sbjct: 459 MISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDDALEIFRKMQFS 518

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
            F PN VTILS+LPACA L+ +  V+EIHGCVLRR+L++   V N+L DTYAKSG+I YS
Sbjct: 519 RFMPNSVTILSLLPACANLLGTKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIGYS 578

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           +TIF GM +KDIITWNSLI GYVLHG +  AL+LF+QMK+ G+KPNRGT  SIILAH L 
Sbjct: 579 KTIFMGMETKDIITWNSLIGGYVLHGSYGPALELFNQMKTQGIKPNRGTLSSIILAHGLM 638

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G VD GKKVF SI   Y IIP +EH SAM+ LYGRS +LEEA++FI++M I+ ++ IWE+
Sbjct: 639 GNVDEGKKVFYSIANDYHIIPALEHCSAMVSLYGRSNRLEEALQFIQEMNIQSETPIWES 698

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
            LT CRIHG+ID+A+ A E LF LEP + + + ++ QIYA+  K   +L+ +K  R+N  
Sbjct: 699 FLTGCRIHGDIDMAIHAAENLFSLEPENTVTENIVSQIYALGAKLGRSLEGKKPRRDNLL 758

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSG-LCIEEEEKE 793
           +   GQ WIEV+NL++TF TG  S+  +DLLY W++ +         ++G L IEEE +E
Sbjct: 759 KKPLGQSWIEVRNLIHTFTTGDQSKLCTDLLYPWVEKMCRVDNRSDQYNGELLIEEEGRE 818

Query: 794 EISGIHSEKLALAFALIGSSQAPH-TIRIVKNIRMCVHCHETAK 836
           E  GIHSEK A+AF LI SS+AP  TIRI+KN+RMC  CH TAK
Sbjct: 819 ETCGIHSEKFAMAFGLISSSRAPKATIRILKNLRMCRDCHNTAK 862


>gi|357490817|ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517031|gb|AES98654.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  986 bits (2549), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/852 (56%), Positives = 632/852 (74%), Gaps = 7/852 (0%)

Query: 17  TKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA 76
           TK S  +  D+ L+ LC NG L+EA+T+LDS+A QG +V+  TY+NLLQ+CID + I + 
Sbjct: 43  TKPSIRKLIDSQLNQLCINGSLSEAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIG 102

Query: 77  RKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQ 136
           ++LH+ + LV  ++ FV+TKL+S+YAKCG L  AR+VF +M  RNL+TWSAMIG  SR++
Sbjct: 103 KELHSRIGLVENVNPFVETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNK 162

Query: 137 RWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRN 196
            W EVV LF+ M++DG+ PD+FL PK+LQACG C D E G+L+HS+VI+ GM   + +RN
Sbjct: 163 SWGEVVGLFYAMMRDGVLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRN 222

Query: 197 SVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL 256
           S++AVY KCG++  A++ F+ MDE+D VAWN+MISG+ Q GE  +A + FD M ++ ++ 
Sbjct: 223 SIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEP 282

Query: 257 GVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 316
            +VT+NILI  YNQLG CD+A++++++ME  GI PDV+TWT MISGF Q GR S ALDL 
Sbjct: 283 SLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLL 342

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
           KEM   GV  N +TI SA SAC  LK+L+MG+EIHS+AVKM   D+VLVGNSLI+MY KC
Sbjct: 343 KEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKC 402

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
            +L+AA+ +FDM+ ++DVYSWNS+I GY QAG+CGKA+ELF+KMQESD PPN+ITWN++I
Sbjct: 403 GDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMI 462

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
           +GY+Q+G ED+A+DLF+ + K+ K KRN ASWNSLI+G+ Q GQK+ AL +FR MQ    
Sbjct: 463 TGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHI 522

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            PN VTILS+LP CA LVAS KVKEIH   +RR L S L V N LID+YAKSGN++YS+ 
Sbjct: 523 LPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKN 582

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           IF+ +S KD ++WNS++  YVLHG   +ALDLF QM+  GL+PNRGTF SI+LA+  AGM
Sbjct: 583 IFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAGM 642

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           VD GK VF  IT+ Y +   +EHYSAM+ L GRSGKL EA++FI+ MPIEP+SS+W ALL
Sbjct: 643 VDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPIEPNSSVWGALL 702

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
           TACRIH N  +AVLA +R+ + EPG+ + + L+ Q Y++CGK E        E E     
Sbjct: 703 TACRIHRNFGVAVLAGKRMLEFEPGNNITRHLLSQAYSLCGKFEP-------EGEKAVNK 755

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEIS 796
             GQ WIE  N+V+TFV G  S  Y D L+SWL+ V  NV    S + L IEEEEKE  S
Sbjct: 756 PIGQSWIERNNVVHTFVVGDQSNPYLDKLHSWLKRVAVNVKTHVSDNELYIEEEEKENTS 815

Query: 797 GIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHH 856
            +HSEKLA AFALI     P  +RIVK +RMC  CH+TAKY+SM + CEI+L+DS CLHH
Sbjct: 816 SVHSEKLAFAFALIDPHNKPQILRIVKKLRMCRDCHDTAKYISMAYGCEIYLSDSNCLHH 875

Query: 857 FKNGQCSCGDYW 868
           FK G CSC DYW
Sbjct: 876 FKGGHCSCRDYW 887


>gi|356551872|ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Glycine max]
          Length = 945

 Score =  939 bits (2428), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/781 (57%), Positives = 602/781 (77%), Gaps = 1/781 (0%)

Query: 16  LTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHL 75
           +T++S+P+  DT L+ LC NG L+EA+ +LDS+A QG+KVR  T++NLLQACID + I +
Sbjct: 43  MTQRSHPKLVDTQLNQLCANGSLSEAVAILDSLAQQGSKVRPITFMNLLQACIDKDCILV 102

Query: 76  ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
            R+LH  + LV +++ FV+TKL+S+YAKCG LD+AR+VF++MRERNL+TWSAMIGA SRD
Sbjct: 103 GRELHTRIGLVRKVNPFVETKLVSMYAKCGHLDEARKVFDEMRERNLFTWSAMIGACSRD 162

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
            +W EVVELF+ M+Q G+ PDDFL PK+L+ACG   D E G+L+HSLVI+ GM     V 
Sbjct: 163 LKWEEVVELFYDMMQHGVLPDDFLLPKVLKACGKFRDIETGRLIHSLVIRGGMCSSLHVN 222

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           NS+LAVY KCG++  A + F  MDE++ V+WN +I+GY Q GE ++A + FD M  E ++
Sbjct: 223 NSILAVYAKCGEMSCAEKIFRRMDERNCVSWNVIITGYCQRGEIEQAQKYFDAMQEEGME 282

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
            G+VT+NILI SY+QLG CD+AM+++++MES GITPDV+TWT MISGF Q GR ++A DL
Sbjct: 283 PGLVTWNILIASYSQLGHCDIAMDLMRKMESFGITPDVYTWTSMISGFTQKGRINEAFDL 342

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
            ++M  VGV PN +TI SA SAC  +K+L+MG EIHS+AVK    DD+L+GNSLI+MY+K
Sbjct: 343 LRDMLIVGVEPNSITIASAASACASVKSLSMGSEIHSIAVKTSMVDDILIGNSLIDMYAK 402

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
             +LEAA+ +FD++ ++DVYSWNS+I GYCQAG+CGKA+ELF+KMQESD PPNV+TWNV+
Sbjct: 403 GGDLEAAQSIFDVMLERDVYSWNSIIGGYCQAGFCGKAHELFMKMQESDSPPNVVTWNVM 462

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           I+G++QNG+EDEA++LF R+ K+ K+K N ASWNSLI+G+ Q  QK+ AL +FR+MQ S 
Sbjct: 463 ITGFMQNGDEDEALNLFLRIEKDGKIKPNVASWNSLISGFLQNRQKDKALQIFRQMQFSN 522

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
             PN VT+L++LPAC  LVA+ KVKEIH C  RR+L S L V N+ ID+YAKSGNI+YSR
Sbjct: 523 MAPNLVTVLTILPACTNLVAAKKVKEIHCCATRRNLVSELSVSNTFIDSYAKSGNIMYSR 582

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            +FDG+S KDII+WNSL+ GYVLHG   +ALDLFDQM+  GL P+R T  SII A+S A 
Sbjct: 583 KVFDGLSPKDIISWNSLLSGYVLHGCSESALDLFDQMRKDGLHPSRVTLTSIISAYSHAE 642

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
           MVD GK  F +I+E YQI   +EHYSAM+ L GRSGKL +A+EFI++MP+EP+SS+W AL
Sbjct: 643 MVDEGKHAFSNISEEYQIRLDLEHYSAMVYLLGRSGKLAKALEFIQNMPVEPNSSVWAAL 702

Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
           LTACRIH N  +A+ A E + +L+P +++ Q L+ Q Y++CGK  +A K+ KLE+E   +
Sbjct: 703 LTACRIHKNFGMAIFAGEHMLELDPENIITQHLLSQAYSVCGKSWEAQKMTKLEKEKFVK 762

Query: 736 NSFGQCWIEVKNLVYTFVTG-GWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEE 794
              GQ WIE+ N+V+TFV G   S  Y D ++SWL+ V ENV A  S +GL IEEEEKE 
Sbjct: 763 MPVGQSWIEMNNMVHTFVVGDDQSIPYLDKIHSWLKRVGENVKAHISDNGLRIEEEEKEN 822

Query: 795 I 795
           I
Sbjct: 823 I 823


>gi|255538774|ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551153|gb|EEF52639.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1218

 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/600 (61%), Positives = 461/600 (76%), Gaps = 3/600 (0%)

Query: 8   TFQQLHSLLTKKSNP---RFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLL 64
           T     +  TK S P   +  D+HL++LC  GRLNEA++ L+ IA  G+KV   T+I+LL
Sbjct: 22  TLSAFSTKPTKSSVPFTKKITDSHLNYLCKKGRLNEAVSALELIAQHGSKVSPKTFISLL 81

Query: 65  QACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYT 124
           Q+CID NS+ L RK+HA  +LV E + F++TKL+S+YAKCG L DAR++F +MRE+NLYT
Sbjct: 82  QSCIDCNSVTLGRKVHAHFHLVQEKNPFLETKLVSMYAKCGSLSDARKLFGEMREKNLYT 141

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           WSAMIGA+SR+ RW+EVVELF++M+++   PD FL PKILQACGN  D ++G+++HSL I
Sbjct: 142 WSAMIGAFSREHRWKEVVELFYMMMEENCLPDAFLLPKILQACGNSRDIKSGEMVHSLAI 201

Query: 185 KLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHR 244
           K G+     V NS+LAVY KCGKL  A + FE MD+ +  AWN++ISGY Q G+ +EA R
Sbjct: 202 KCGVDGYPFVNNSILAVYAKCGKLSLASKCFEMMDKSETAAWNALISGYCQHGQIEEAQR 261

Query: 245 LFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFA 304
           LFD M  E I+ G+V++NILI  YNQLG  D+AME++K+ME LG +PDV TWT MISG A
Sbjct: 262 LFDAMREEGIEPGLVSWNILIAGYNQLGYFDIAMELMKKMEVLGTSPDVVTWTSMISGLA 321

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           QN + S+AL LF +M    V PNGVTI+SA+SAC  LK L  G+EIH+LAVK+GF +DVL
Sbjct: 322 QNDKASKALHLFNDMILARVEPNGVTISSAVSACASLKVLNEGLEIHALAVKLGFVEDVL 381

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
           VGNSLI+MYSKC +LE A +VFDM+ +KDVY+WNSMI GYCQ GYCGKA+ LF+KMQ+S+
Sbjct: 382 VGNSLIDMYSKCGKLENAWKVFDMMPEKDVYTWNSMIGGYCQVGYCGKAHMLFMKMQKSE 441

Query: 425 VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
             PN ITWN +I GYI NG+ED+A+DLF+RM ++ K+KR+TASWNSLI+GY Q+GQK+ A
Sbjct: 442 TQPNAITWNNMIWGYIHNGDEDQAMDLFRRMEEDGKIKRDTASWNSLISGYLQIGQKDKA 501

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           L +FR+MQS     N VTILSVLPACA L+A   VKEIHGCV+RR+L+S LP+ NSLIDT
Sbjct: 502 LSIFRQMQSFSININSVTILSVLPACANLIALKMVKEIHGCVIRRNLDSLLPITNSLIDT 561

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           YAKSGNI YSRTIFD    KD ITWNSLI GYVL G   AAL L DQMK  G+KPNR TF
Sbjct: 562 YAKSGNIGYSRTIFDRALFKDFITWNSLIAGYVLFGCSDAALGLVDQMKKLGIKPNRSTF 621



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 218/419 (52%), Gaps = 8/419 (1%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+  Y + G    A ++   M       +++TW+ MI  F++  R  + ++LF  M    
Sbjct: 114 LVSMYAKCGSLSDARKLFGEMRE----KNLYTWSAMIGAFSREHRWKEVVELFYMMMEEN 169

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
            +P+   +   + AC + + +  G  +HSLA+K G      V NS++ +Y+KC +L  A 
Sbjct: 170 CLPDAFLLPKILQACGNSRDIKSGEMVHSLAIKCGVDGYPFVNNSILAVYAKCGKLSLAS 229

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
           + F+M+   +  +WN++I+GYCQ G   +A  LF  M+E  + P +++WN+LI+GY Q G
Sbjct: 230 KCFEMMDKSETAAWNALISGYCQHGQIEEAQRLFDAMREEGIEPGLVSWNILIAGYNQLG 289

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
             D A++L ++M +      +  +W S+I+G  Q  + + AL +F  M  +   PN VTI
Sbjct: 290 YFDIAMELMKKM-EVLGTSPDVVTWTSMISGLAQNDKASKALHLFNDMILARVEPNGVTI 348

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
            S + ACA L   N+  EIH   ++      + V NSLID Y+K G +  +  +FD M  
Sbjct: 349 SSAVSACASLKVLNEGLEIHALAVKLGFVEDVLVGNSLIDMYSKCGKLENAWKVFDMMPE 408

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           KD+ TWNS+I GY   G+   A  LF +M+    +PN  T+ ++I  +   G  D    +
Sbjct: 409 KDVYTWNSMIGGYCQVGYCGKAHMLFMKMQKSETQPNAITWNNMIWGYIHNGDEDQAMDL 468

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLTAC 679
           F  + E  +I      ++++I  Y + G+ ++A+     M    I  +S    ++L AC
Sbjct: 469 FRRMEEDGKIKRDTASWNSLISGYLQIGQKDKALSIFRQMQSFSININSVTILSVLPAC 527



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/343 (33%), Positives = 183/343 (53%), Gaps = 5/343 (1%)

Query: 97  LLSVYAKCGCLDDAREVFEDMR----ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           L++ Y + G  D A E+ + M       ++ TW++MI   +++ +  + + LF  M+   
Sbjct: 281 LIAGYNQLGYFDIAMELMKKMEVLGTSPDVVTWTSMISGLAQNDKASKALHLFNDMILAR 340

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P+       + AC +      G  +H+L +KLG      V NS++ +Y KCGKL  A 
Sbjct: 341 VEPNGVTISSAVSACASLKVLNEGLEIHALAVKLGFVEDVLVGNSLIDMYSKCGKLENAW 400

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + F+ M EKD   WNSMI GY Q+G   +AH LF KM + E +   +T+N +I  Y   G
Sbjct: 401 KVFDMMPEKDVYTWNSMIGGYCQVGYCGKAHMLFMKMQKSETQPNAITWNNMIWGYIHNG 460

Query: 273 QCDVAMEMVKRMESLG-ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
             D AM++ +RME  G I  D  +W  +ISG+ Q G+  +AL +F++M    +  N VTI
Sbjct: 461 DEDQAMDLFRRMEEDGKIKRDTASWNSLISGYLQIGQKDKALSIFRQMQSFSININSVTI 520

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
            S + AC +L AL M  EIH   ++      + + NSLI+ Y+K   +  +  +FD    
Sbjct: 521 LSVLPACANLIALKMVKEIHGCVIRRNLDSLLPITNSLIDTYAKSGNIGYSRTIFDRALF 580

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           KD  +WNS+IAGY   G    A  L  +M++  + PN  T+++
Sbjct: 581 KDFITWNSLIAGYVLFGCSDAALGLVDQMKKLGIKPNRSTFSL 623



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/428 (20%), Positives = 181/428 (42%), Gaps = 83/428 (19%)

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           + GR ++A+   + ++  G   +  T  S + +C D  ++ +G ++H+            
Sbjct: 51  KKGRLNEAVSALELIAQHGSKVSPKTFISLLQSCIDCNSVTLGRKVHAH----------- 99

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
                                F ++++K+ +    +++ Y + G    A +LF +M+E  
Sbjct: 100 ---------------------FHLVQEKNPFLETKLVSMYAKCGSLSDARKLFGEMREK- 137

Query: 425 VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
              N+ TW+ +I  + +     E V+LF  M                             
Sbjct: 138 ---NLYTWSAMIGAFSREHRWKEVVELFYMM----------------------------- 165

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
                 M+ +C  P+   +  +L AC         + +H   ++  ++    V NS++  
Sbjct: 166 ------MEENCL-PDAFLLPKILQACGNSRDIKSGEMVHSLAIKCGVDGYPFVNNSILAV 218

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           YAK G +  +   F+ M   +   WN+LI GY  HG    A  LFD M+  G++P   ++
Sbjct: 219 YAKCGKLSLASKCFEMMDKSETAAWNALISGYCQHGQIEEAQRLFDAMREEGIEPGLVSW 278

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM- 663
             +I  ++  G  D+  ++   + E     P +  +++MI    ++ K  +A+    DM 
Sbjct: 279 NILIAGYNQLGYFDIAMELMKKM-EVLGTSPDVVTWTSMISGLAQNDKASKALHLFNDMI 337

Query: 664 --PIEPDSSIWEALLTACR----IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICG 717
              +EP+     + ++AC     ++  +++  LA++  F +E  DVL+   ++ +Y+ CG
Sbjct: 338 LARVEPNGVTISSAVSACASLKVLNEGLEIHALAVKLGF-VE--DVLVGNSLIDMYSKCG 394

Query: 718 KPEDALKV 725
           K E+A KV
Sbjct: 395 KLENAWKV 402


>gi|242077973|ref|XP_002443755.1| hypothetical protein SORBIDRAFT_07g001380 [Sorghum bicolor]
 gi|241940105|gb|EES13250.1| hypothetical protein SORBIDRAFT_07g001380 [Sorghum bicolor]
          Length = 871

 Score =  706 bits (1821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/792 (47%), Positives = 519/792 (65%), Gaps = 22/792 (2%)

Query: 87  TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
           +E  +  +TKL+++++  G L DAR+VFE M  R+L  WSAMIGAY+    +++VV L  
Sbjct: 92  SEPLIVTETKLITMHSCAGRLGDARKVFEGMACRDLLAWSAMIGAYAIRGLYKDVVSLAV 151

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRR---VRNSVLAVY 202
            MV++G+ PD FL  +ILQAC    D E G  MHSL I+ G M+   R   V NSVLA+Y
Sbjct: 152 TMVREGVTPDRFLITRILQACAYTEDLELGVAMHSLAIRSGFMAETARDVPVGNSVLAMY 211

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
           VKC +L  AR  FE M ++D   WNSMI G  Q  E +EA  L D M RE    GVVT+N
Sbjct: 212 VKCRELGRARVVFEKMGQRDLGTWNSMIFGCCQSNEWEEARMLLDDMRREGTLPGVVTWN 271

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            LI SY + G+ DVAMEM+++ME  G+ PDV TWT ++SGF  + R+ +AL  F  M   
Sbjct: 272 TLISSYARSGELDVAMEMLEQMEESGVAPDVVTWTSLVSGFVHSDRSGEALRCFMRMRLA 331

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           GV PNG+TI SAISAC  L+ L+ GME+H  A+K+G  ++VL GNSL++MY+KC E+ AA
Sbjct: 332 GVEPNGMTIASAISACASLRLLSQGMELHCHAIKVGSVNNVLSGNSLVDMYAKCGEIVAA 391

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
           +R+F+ I +KD++SWNSM+AGY QAGYCGKAYELF KM+   V  NVITWN++ISGYI+N
Sbjct: 392 KRIFNEIPEKDIFSWNSMVAGYAQAGYCGKAYELFCKMESLGVRRNVITWNIMISGYIRN 451

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G+++ A +LFQ M ++  VKR+TASWN+LIAG    G  + AL +FR+MQS    P+ +T
Sbjct: 452 GDDERAFELFQMM-ESYGVKRDTASWNALIAGSVHNGHSDRALRIFRQMQSLLVRPDYIT 510

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
           ILS++PA A LVA +KV+EIH C+   +LE    + N+LI+ Y+KSG++  +  +FD  S
Sbjct: 511 ILSIIPAFANLVAFSKVREIHACIFHNNLEMDGKIANALINAYSKSGDLAGACAVFDRHS 570

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
           S++II+WN +I  ++LHG    ALD F +MK  G++P+  T  ++I A+ L G V   K+
Sbjct: 571 SRNIISWNCIILAHLLHGSPCEALDRFCEMKQEGVRPDHTTLTAVIKAYGLQGKVSEAKQ 630

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
           +F ++T  Y I P ++HY+A++DL GRSG L+EA EFI++MP+ P+ ++WEALLTA  IH
Sbjct: 631 IFYNMTHDYNIHPDLDHYAAIVDLLGRSGSLQEAYEFIDNMPLIPNLAVWEALLTAASIH 690

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
           GN  LA LA   L  L+P D  IQRL+   + + GK  D + +  +  +         C 
Sbjct: 691 GNARLANLAARELSLLDPSDPRIQRLVFNYWDLTGKSAD-VPLMTVYNKGRELEDVDSCS 749

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN---VTARSSHSGLC---IEEEEKEEIS 796
           +E+KN VY F T       SD L   L+N       +  +   S LC     EEEKEE+S
Sbjct: 750 VEIKNKVYLFST-------SDNLA--LENTIAELKLIMIQIRMSLLCNGTDAEEEKEELS 800

Query: 797 GIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHH 856
           GIH EKLA+AFA + +S     IRI+K +RMC  CH  AK VS  +  +I + DS CLH 
Sbjct: 801 GIHCEKLAIAFA-VSNSPPFRNIRIIKTLRMCSLCHVFAKLVSEKYERQILIKDSNCLHK 859

Query: 857 FKNGQCSCGDYW 868
           FKNG+CSC DYW
Sbjct: 860 FKNGKCSCEDYW 871



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/555 (23%), Positives = 230/555 (41%), Gaps = 86/555 (15%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-----LNLVTEID 90
           G   + +++  ++  +G    R     +LQAC  +  + L   +H+          T  D
Sbjct: 141 GLYKDVVSLAVTMVREGVTPDRFLITRILQACAYTEDLELGVAMHSLAIRSGFMAETARD 200

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           V V   +L++Y KC  L  AR VFE M +R+L TW++MI    +   W E   L   M +
Sbjct: 201 VPVGNSVLAMYVKCRELGRARVVFEKMGQRDLGTWNSMIFGCCQSNEWEEARMLLDDMRR 260

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           +G  P    +  ++ +    G+ +    M   + + G++       S+++ +V   +   
Sbjct: 261 EGTLPGVVTWNTLISSYARSGELDVAMEMLEQMEESGVAPDVVTWTSLVSGFVHSDRSGE 320

Query: 211 ARRFFESMD----EKDG-----------------------------------VAWNSMIS 231
           A R F  M     E +G                                   ++ NS++ 
Sbjct: 321 ALRCFMRMRLAGVEPNGMTIASAISACASLRLLSQGMELHCHAIKVGSVNNVLSGNSLVD 380

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
            Y + GE   A R+F+++  ++I     ++N ++  Y Q G C  A E+  +MESLG+  
Sbjct: 381 MYAKCGEIVAAKRIFNEIPEKDI----FSWNSMVAGYAQAGYCGKAYELFCKMESLGVRR 436

Query: 292 DVFTWTCMISGF-----------------------------------AQNGRTSQALDLF 316
           +V TW  MISG+                                     NG + +AL +F
Sbjct: 437 NVITWNIMISGYIRNGDDERAFELFQMMESYGVKRDTASWNALIAGSVHNGHSDRALRIF 496

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
           ++M  + V P+ +TI S I A  +L A +   EIH+         D  + N+LIN YSK 
Sbjct: 497 RQMQSLLVRPDYITILSIIPAFANLVAFSKVREIHACIFHNNLEMDGKIANALINAYSKS 556

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
            +L  A  VFD    +++ SWN +I  +   G   +A + F +M++  V P+  T   +I
Sbjct: 557 GDLAGACAVFDRHSSRNIISWNCIILAHLLHGSPCEALDRFCEMKQEGVRPDHTTLTAVI 616

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
             Y   G   EA  +F  M  +  +  +   + +++     LG+  +    +  + +   
Sbjct: 617 KAYGLQGKVSEAKQIFYNMTHDYNIHPDLDHYAAIV---DLLGRSGSLQEAYEFIDNMPL 673

Query: 497 YPNCVTILSVLPACA 511
            PN     ++L A +
Sbjct: 674 IPNLAVWEALLTAAS 688



 Score = 49.7 bits (117), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 40/206 (19%)

Query: 530 SLESSLPVM---NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           S  SS P++     LI  ++ +G +  +R +F+GM+ +D++ W+++I  Y + G +   +
Sbjct: 88  SSASSEPLIVTETKLITMHSCAGRLGDARKVFEGMACRDLLAWSAMIGAYAIRGLYKDVV 147

Query: 587 DLFDQMKSFGLKPNRGTFLSIILA-------------HSLA---GM-------VDLGKKV 623
            L   M   G+ P+R     I+ A             HSLA   G        V +G  V
Sbjct: 148 SLAVTMVREGVTPDRFLITRILQACAYTEDLELGVAMHSLAIRSGFMAETARDVPVGNSV 207

Query: 624 FCSITECYQIIPM-----------IEHYSAMIDLYGRSGKLEEAMEFIEDMPIE---PDS 669
                +C ++              +  +++MI    +S + EEA   ++DM  E   P  
Sbjct: 208 LAMYVKCRELGRARVVFEKMGQRDLGTWNSMIFGCCQSNEWEEARMLLDDMRREGTLPGV 267

Query: 670 SIWEALLTACRIHGNIDLAVLAIERL 695
             W  L+++    G +D+A+  +E++
Sbjct: 268 VTWNTLISSYARSGELDVAMEMLEQM 293


>gi|357147690|ref|XP_003574443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Brachypodium distachyon]
          Length = 859

 Score =  686 bits (1769), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/840 (43%), Positives = 526/840 (62%), Gaps = 14/840 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFV- 93
           +GRL E I  L         ++    +++      +  +    + H   ++ +E   FV 
Sbjct: 28  HGRLQEPIMALAQAPPLPLSLQEARSVHVPH---RARPVEEPARAHPSSSIASEEPRFVS 84

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           +TKL++ ++  G LDDAR+VF+ M  ++L  WS+MIGAY+    + EV+ L   MV +G+
Sbjct: 85  ETKLIAFHSSAGRLDDARKVFDGMSHKDLLAWSSMIGAYATRGMFDEVLVLAVKMVSEGV 144

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR---VRNSVLAVYVKCGKLIW 210
            PD FL  +ILQAC    D E G ++HS+ I+ G     +   V NSVL +YVKCG+L +
Sbjct: 145 LPDRFLITRILQACAYAEDLELGTVLHSMAIRRGFMGREKDVPVSNSVLVMYVKCGELGF 204

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           AR  FE M  +D   WNSMI G  +  + +EA RL D M +E I+ GVVT+N LI SY +
Sbjct: 205 ARVVFEKMGRRDLGTWNSMIFGCCRSCKWEEARRLLDDMRKEGIEPGVVTWNTLISSYAR 264

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G  +VA+E++++ME  G+ PDV TWT ++SGF  + R  +AL  F  M   GV PNG+T
Sbjct: 265 SGDLNVAVELLEQMEESGVEPDVVTWTSLVSGFVHSDRGVEALQCFIRMRLAGVEPNGMT 324

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
           I  AISAC  LK L  G  +H  A+K+G   +VL GNSL++MY+KC E  AA R+F+ I 
Sbjct: 325 IACAISACASLKLLNQGSMLHCHAIKVGSVKNVLSGNSLVDMYAKCGETVAASRIFNQIP 384

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
           +KD++SWNSM+AGY QAGYCGKAYELF KM+   +  N ITWN +ISGYI+NG+++ A +
Sbjct: 385 EKDIFSWNSMVAGYAQAGYCGKAYELFCKMENYGIRRNAITWNTMISGYIRNGDDERAFE 444

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           LFQ M ++  VKR+TASWN LIAG    G  + AL +FR+MQ+    P+ +T+LS++PA 
Sbjct: 445 LFQTM-ESYGVKRDTASWNILIAGSVHNGYFDRALRIFRQMQAVLIKPDYITVLSIIPAF 503

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
           A LVA+ KV+EIH C+   +LE    + N+LI+ Y+KSG++  +  +FD  SS++II+WN
Sbjct: 504 ANLVAAWKVREIHACIFHHNLEIDGKIANALINAYSKSGDLAGACAVFDRHSSRNIISWN 563

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC 630
            +I  ++LHG     L+ F +MK  G+ P+  T  ++I A+ +  MV  G+++F ++ + 
Sbjct: 564 CIIVAHLLHGSPTEVLNHFYKMKQQGVLPDHTTLTAVIKAYGMEAMVSEGREIFLNMEKN 623

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
           Y + P ++HY+AM+DL GRSG+L+EA E I++MP+ P+ ++WEALLT+  +HGN+ LA L
Sbjct: 624 YNVTPDLDHYTAMVDLLGRSGRLQEAYELIDEMPLTPNLTVWEALLTSAIMHGNVRLAHL 683

Query: 691 AIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR--NSFGQCWIEVKNL 748
           A   + D+EP D+ IQ ++  +  + GK  D   V KL   N  R  +    C  E+KN+
Sbjct: 684 AATEMSDIEPSDLRIQMVVSGLQDLAGKSFD---VPKLTVHNKGRMLDGIECCSTEIKNI 740

Query: 749 VYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFA 808
           VY F TG    S   +    L  +   ++     SG    EEEKEE++GIH EKLA+A  
Sbjct: 741 VYLFSTGDNVASEHIVAELELIMMQIGLSMLDISSGTLDVEEEKEEVAGIHCEKLAIALG 800

Query: 809 LIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +  S Q   +IRI+K  RMC HCH  AK VS  +  +I + D KCLH F+NG+CSC DYW
Sbjct: 801 ISNSPQF-RSIRIIKTTRMCNHCHTFAKLVSEKYGRQILIKDPKCLHKFENGKCSCEDYW 859


>gi|413941674|gb|AFW74323.1| hypothetical protein ZEAMMB73_642674 [Zea mays]
          Length = 876

 Score =  685 bits (1767), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/793 (46%), Positives = 508/793 (64%), Gaps = 30/793 (3%)

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +  +TKL++V++  G L DAR+VFE M  R+L  WSAMIGAY+    + EVV L   MV+
Sbjct: 99  IVSETKLITVHSCAGRLGDARKVFEGMACRDLLAWSAMIGAYAIRGLYEEVVALAVAMVR 158

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRR---VRNSVLAVYVKCG 206
           +G+ PD FL  +ILQAC    D E G  MHSL I+ G M+   R   V NSVLA+YVKCG
Sbjct: 159 EGVIPDRFLITRILQACAYTEDLELGTAMHSLAIRRGFMAEGARDVPVGNSVLAMYVKCG 218

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           +L  AR  F+ M ++D   WNSMI G  +  E +EA RL D M R+  + G+VT+N L+ 
Sbjct: 219 ELGRARAAFDMMGQRDLCTWNSMIFGCCRSNEWEEARRLLDDMRRQGTEPGLVTWNTLVS 278

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
           SY + G+ DVAMEM+++ME  G+ PDV TWT ++SGF    R  +AL  F  M   GV P
Sbjct: 279 SYARSGELDVAMEMLEQMEESGVAPDVVTWTSLVSGFVHGDRGGEALWCFARMRLAGVEP 338

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           NG+TI SAISAC  L+ L+ GME+H  A+K+G  ++VL GNSL++MY+KC E+ AA+RVF
Sbjct: 339 NGMTIASAISACASLRLLSQGMELHCHAIKVGSVNNVLSGNSLVDMYAKCGEIIAAKRVF 398

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
           D I +KD++SWNSM+AGY QAGYCGKAYELF +M+   V  NVITWN++ISGYI+NG+++
Sbjct: 399 DEIPEKDIFSWNSMVAGYAQAGYCGKAYELFCEMESLGVRRNVITWNIMISGYIRNGDDE 458

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
            A +LFQ M ++  VKR+TASWN+LIAG    G  + AL +F +MQS    P+ +TILS+
Sbjct: 459 RAFELFQMM-ESCGVKRDTASWNALIAGSVHNGHSDRALRIFWQMQSLLVRPDFITILSI 517

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
           +PA A L    KV+EIH C+   +LE    + N+LI+ Y+KSG++  +  +FD  SS++I
Sbjct: 518 IPAFANLAGFWKVREIHACIYHNNLEMDGKIANALINAYSKSGDLAGACAVFDRHSSRNI 577

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
           I+WN +I  ++LHG    ALD F +MK  G++P+  T  ++I A+ L G V   K++F +
Sbjct: 578 ISWNCIILAHLLHGSPSEALDRFCEMKQEGVRPDHTTLTAVIKAYGLQGKVSEAKRIFHN 637

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
           +T  Y IIP ++HY+A++DL GRSG L+EA EFI +MP+ P+ ++WEALLTA  IHGN  
Sbjct: 638 MTHDYNIIPDLDHYTAIVDLLGRSGSLQEAYEFIGNMPLIPNLAVWEALLTAATIHGNAR 697

Query: 687 LAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDA--LKVRKLERENTRRNSFGQCWIE 744
           LA L    L  L+P D  IQRL+   + + GK  D   + V    RE    +S   C +E
Sbjct: 698 LANLTARELSSLDPSDPRIQRLVFNYWGLTGKSVDVPLMTVYNGGRELEDVDS---CSVE 754

Query: 745 VKNLVYTFVTG---GWSESYSDLLYSWLQ------NVPENVTARSSHSGLCIEEEEKEEI 795
           +KN VY F TG       + ++L    +Q      N+     A      L          
Sbjct: 755 IKNNVYLFSTGDNLALESTVAELKLIMIQIRMSLLNISNETNAEEEKEEL---------- 804

Query: 796 SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
           SGIH EKLA+AFA I +S    +IRI+K +RMC HCH  AK VS  +  +I + DS CLH
Sbjct: 805 SGIHCEKLAIAFA-ISNSPPFRSIRIIKTLRMCSHCHIFAKLVSEKYERQILIKDSNCLH 863

Query: 856 HFKNGQCSCGDYW 868
            F++G+CSC  YW
Sbjct: 864 KFEDGKCSCEGYW 876



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 234/517 (45%), Gaps = 43/517 (8%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF 92
           C +    EA  +LD +  QG                                  TE  + 
Sbjct: 246 CRSNEWEEARRLLDDMRRQG----------------------------------TEPGLV 271

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRER----NLYTWSAMIGAYSRDQRWREVVELFFLM 148
               L+S YA+ G LD A E+ E M E     ++ TW++++  +    R  E +  F  M
Sbjct: 272 TWNTLVSSYARSGELDVAMEMLEQMEESGVAPDVVTWTSLVSGFVHGDRGGEALWCFARM 331

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
              G+ P+       + AC +      G  +H   IK+G        NS++ +Y KCG++
Sbjct: 332 RLAGVEPNGMTIASAISACASLRLLSQGMELHCHAIKVGSVNNVLSGNSLVDMYAKCGEI 391

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
           I A+R F+ + EKD  +WNSM++GY Q G   +A+ LF +M    ++  V+T+NI+I  Y
Sbjct: 392 IAAKRVFDEIPEKDIFSWNSMVAGYAQAGYCGKAYELFCEMESLGVRRNVITWNIMISGY 451

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
            + G  + A E+ + MES G+  D  +W  +I+G   NG + +AL +F +M  + V P+ 
Sbjct: 452 IRNGDDERAFELFQMMESCGVKRDTASWNALIAGSVHNGHSDRALRIFWQMQSLLVRPDF 511

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
           +TI S I A  +L       EIH+         D  + N+LIN YSK  +L  A  VFD 
Sbjct: 512 ITILSIIPAFANLAGFWKVREIHACIYHNNLEMDGKIANALINAYSKSGDLAGACAVFDR 571

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
              +++ SWN +I  +   G   +A + F +M++  V P+  T   +I  Y   G   EA
Sbjct: 572 HSSRNIISWNCIILAHLLHGSPSEALDRFCEMKQEGVRPDHTTLTAVIKAYGLQGKVSEA 631

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
             +F  M  +  +  +   + +++     LG+  +    +  + +    PN + +   L 
Sbjct: 632 KRIFHNMTHDYNIIPDLDHYTAIV---DLLGRSGSLQEAYEFIGNMPLIPN-LAVWEALL 687

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
             A +  + ++  +    L  SL+ S P +  L+  Y
Sbjct: 688 TAATIHGNARLANLTAREL-SSLDPSDPRIQRLVFNY 723


>gi|413941673|gb|AFW74322.1| hypothetical protein ZEAMMB73_642674 [Zea mays]
          Length = 1028

 Score =  681 bits (1757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/789 (46%), Positives = 506/789 (64%), Gaps = 30/789 (3%)

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +  +TKL++V++  G L DAR+VFE M  R+L  WSAMIGAY+    + EVV L   MV+
Sbjct: 99  IVSETKLITVHSCAGRLGDARKVFEGMACRDLLAWSAMIGAYAIRGLYEEVVALAVAMVR 158

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRR---VRNSVLAVYVKCG 206
           +G+ PD FL  +ILQAC    D E G  MHSL I+ G M+   R   V NSVLA+YVKCG
Sbjct: 159 EGVIPDRFLITRILQACAYTEDLELGTAMHSLAIRRGFMAEGARDVPVGNSVLAMYVKCG 218

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           +L  AR  F+ M ++D   WNSMI G  +  E +EA RL D M R+  + G+VT+N L+ 
Sbjct: 219 ELGRARAAFDMMGQRDLCTWNSMIFGCCRSNEWEEARRLLDDMRRQGTEPGLVTWNTLVS 278

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
           SY + G+ DVAMEM+++ME  G+ PDV TWT ++SGF    R  +AL  F  M   GV P
Sbjct: 279 SYARSGELDVAMEMLEQMEESGVAPDVVTWTSLVSGFVHGDRGGEALWCFARMRLAGVEP 338

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           NG+TI SAISAC  L+ L+ GME+H  A+K+G  ++VL GNSL++MY+KC E+ AA+RVF
Sbjct: 339 NGMTIASAISACASLRLLSQGMELHCHAIKVGSVNNVLSGNSLVDMYAKCGEIIAAKRVF 398

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
           D I +KD++SWNSM+AGY QAGYCGKAYELF +M+   V  NVITWN++ISGYI+NG+++
Sbjct: 399 DEIPEKDIFSWNSMVAGYAQAGYCGKAYELFCEMESLGVRRNVITWNIMISGYIRNGDDE 458

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
            A +LFQ M ++  VKR+TASWN+LIAG    G  + AL +F +MQS    P+ +TILS+
Sbjct: 459 RAFELFQMM-ESCGVKRDTASWNALIAGSVHNGHSDRALRIFWQMQSLLVRPDFITILSI 517

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
           +PA A L    KV+EIH C+   +LE    + N+LI+ Y+KSG++  +  +FD  SS++I
Sbjct: 518 IPAFANLAGFWKVREIHACIYHNNLEMDGKIANALINAYSKSGDLAGACAVFDRHSSRNI 577

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
           I+WN +I  ++LHG    ALD F +MK  G++P+  T  ++I A+ L G V   K++F +
Sbjct: 578 ISWNCIILAHLLHGSPSEALDRFCEMKQEGVRPDHTTLTAVIKAYGLQGKVSEAKRIFHN 637

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
           +T  Y IIP ++HY+A++DL GRSG L+EA EFI +MP+ P+ ++WEALLTA  IHGN  
Sbjct: 638 MTHDYNIIPDLDHYTAIVDLLGRSGSLQEAYEFIGNMPLIPNLAVWEALLTAATIHGNAR 697

Query: 687 LAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDA--LKVRKLERENTRRNSFGQCWIE 744
           LA L    L  L+P D  IQRL+   + + GK  D   + V    RE    +S   C +E
Sbjct: 698 LANLTARELSSLDPSDPRIQRLVFNYWGLTGKSVDVPLMTVYNGGRELEDVDS---CSVE 754

Query: 745 VKNLVYTFVTG---GWSESYSDLLYSWLQ------NVPENVTARSSHSGLCIEEEEKEEI 795
           +KN VY F TG       + ++L    +Q      N+     A      L          
Sbjct: 755 IKNNVYLFSTGDNLALESTVAELKLIMIQIRMSLLNISNETNAEEEKEEL---------- 804

Query: 796 SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
           SGIH EKLA+AFA I +S    +IRI+K +RMC HCH  AK VS  +  +I + DS CLH
Sbjct: 805 SGIHCEKLAIAFA-ISNSPPFRSIRIIKTLRMCSHCHIFAKLVSEKYERQILIKDSNCLH 863

Query: 856 HFKNGQCSC 864
            F++G+CSC
Sbjct: 864 KFEDGKCSC 872



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 234/517 (45%), Gaps = 43/517 (8%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF 92
           C +    EA  +LD +  QG                                  TE  + 
Sbjct: 246 CRSNEWEEARRLLDDMRRQG----------------------------------TEPGLV 271

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRER----NLYTWSAMIGAYSRDQRWREVVELFFLM 148
               L+S YA+ G LD A E+ E M E     ++ TW++++  +    R  E +  F  M
Sbjct: 272 TWNTLVSSYARSGELDVAMEMLEQMEESGVAPDVVTWTSLVSGFVHGDRGGEALWCFARM 331

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
              G+ P+       + AC +      G  +H   IK+G        NS++ +Y KCG++
Sbjct: 332 RLAGVEPNGMTIASAISACASLRLLSQGMELHCHAIKVGSVNNVLSGNSLVDMYAKCGEI 391

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
           I A+R F+ + EKD  +WNSM++GY Q G   +A+ LF +M    ++  V+T+NI+I  Y
Sbjct: 392 IAAKRVFDEIPEKDIFSWNSMVAGYAQAGYCGKAYELFCEMESLGVRRNVITWNIMISGY 451

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
            + G  + A E+ + MES G+  D  +W  +I+G   NG + +AL +F +M  + V P+ 
Sbjct: 452 IRNGDDERAFELFQMMESCGVKRDTASWNALIAGSVHNGHSDRALRIFWQMQSLLVRPDF 511

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
           +TI S I A  +L       EIH+         D  + N+LIN YSK  +L  A  VFD 
Sbjct: 512 ITILSIIPAFANLAGFWKVREIHACIYHNNLEMDGKIANALINAYSKSGDLAGACAVFDR 571

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
              +++ SWN +I  +   G   +A + F +M++  V P+  T   +I  Y   G   EA
Sbjct: 572 HSSRNIISWNCIILAHLLHGSPSEALDRFCEMKQEGVRPDHTTLTAVIKAYGLQGKVSEA 631

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
             +F  M  +  +  +   + +++     LG+  +    +  + +    PN + +   L 
Sbjct: 632 KRIFHNMTHDYNIIPDLDHYTAIV---DLLGRSGSLQEAYEFIGNMPLIPN-LAVWEALL 687

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
             A +  + ++  +    L  SL+ S P +  L+  Y
Sbjct: 688 TAATIHGNARLANLTAREL-SSLDPSDPRIQRLVFNY 723


>gi|218193953|gb|EEC76380.1| hypothetical protein OsI_13992 [Oryza sativa Indica Group]
          Length = 822

 Score =  676 bits (1745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/795 (46%), Positives = 509/795 (64%), Gaps = 28/795 (3%)

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           E     +TKL++V++  G L DAREVF+ M  R+L  WSAMIGAY+    + +V+ L   
Sbjct: 42  EPRFVAETKLITVHSCAGRLGDAREVFDGMGRRDLLAWSAMIGAYAIRGMYSDVLALAVT 101

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRRVR--NSVLAVYVK 204
           MV++G+ PD FL  +ILQAC    D E G+ +HS+ I+ G M  V+ V   NSVL +Y K
Sbjct: 102 MVEEGVLPDRFLITRILQACAYAEDLELGRALHSMAIRRGFMGRVKDVPVGNSVLVMYAK 161

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
           CG L WAR+ F+ M  +D   WNSMI GY +  E +EA  L D M +E  + GVVT+N L
Sbjct: 162 CGDLGWARKVFDKMVCRDLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTL 221

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
           I SY + G  DVAME++ +ME  G+ PDV TWT ++SGF    R+ +AL  F  M   GV
Sbjct: 222 ISSYARFGDLDVAMELLGQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGV 281

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            PNG++I  AISAC  LK L    E+HS A+K+G  ++VL GNSL++MY+KC E+ AA R
Sbjct: 282 EPNGMSIACAISACASLKLLNQAKELHSHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAWR 341

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           +F  I DKD++SWNSMI+GY QAGYCGKAYELF KM+   V  NVITWN +ISGYI+NG+
Sbjct: 342 IFSGIPDKDIFSWNSMISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGD 401

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
           ++ A +LFQ M ++  VKR+TA+WN LIAG    G  + A+ +FR+MQ+    P+ +TIL
Sbjct: 402 DERAFELFQMM-ESHGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPDYITIL 460

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           S++PA   LVAS KV+EIH C+   +LE    + N+LI+ Y+KSGN+  +  +FD  SS+
Sbjct: 461 SIIPAFTNLVASWKVREIHACIFHHNLELDGKIANALINAYSKSGNLASACAVFDMHSSR 520

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           +II+WN +I  +VLHG  + ALDLF QMK  G+ P+  T +++I A+ L G V  G + F
Sbjct: 521 NIISWNCIILAHVLHGSPNEALDLFCQMKQEGVVPDHTTLVTVIKAYGLTGKVSEGSQTF 580

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
            ++   Y I P ++HY+AM+DL GRSG+L+EA E I++MP+ P+S++W+  LTA  +HGN
Sbjct: 581 FNMANDYNITPELDHYAAMVDLLGRSGRLKEAYELIDEMPLIPNSTVWDTFLTAAVMHGN 640

Query: 685 IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN--SFGQCW 742
           + LA LA   L  ++PGD  +QRL   +  + GK  D   V +    N  RN      C 
Sbjct: 641 VRLAHLAARELSAIDPGDPRVQRLGSSLQDLTGKTVD---VPEEMTPNKGRNLDEVESCS 697

Query: 743 IEVKNLVYTFVTG---GWSESYSDLLYSWLQNVPENVTARSSHSGLCI------EEEEKE 793
           IE++N VY F  G   G  ++ ++L         +++  +  HS L I       EEEKE
Sbjct: 698 IEIRNKVYVFSNGDNVGLEDTVAEL---------KSMMFKMGHSMLDIGIGTLDVEEEKE 748

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
           E+ G+H EKLA+AF L  S Q  + IRI+K  RMC HCH  AK VS  +   I + D KC
Sbjct: 749 EVVGVHCEKLAIAFGLSNSPQFKN-IRIIKTARMCNHCHTFAKLVSEKYGRHILIKDPKC 807

Query: 854 LHHFKNGQCSCGDYW 868
           LH F++G+CSC DYW
Sbjct: 808 LHKFEDGKCSCEDYW 822



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 224/536 (41%), Gaps = 86/536 (16%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA------FLNLVTEI 89
           G  ++ + +  ++  +G    R     +LQAC  +  + L R LH+      F+  V   
Sbjct: 90  GMYSDVLALAVTMVEEGVLPDRFLITRILQACAYAEDLELGRALHSMAIRRGFMGRVK-- 147

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DV V   +L +YAKCG L  AR+VF+ M  R+L TW++MI  Y R   W E   L   M 
Sbjct: 148 DVPVGNSVLVMYAKCGDLGWARKVFDKMVCRDLGTWNSMIFGYCRSAEWEEARHLLDSMR 207

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEA-----GKLMHSLV--------------------- 183
           Q+G  P    +  ++ +    GD +      G++  S V                     
Sbjct: 208 QEGTQPGVVTWNTLISSYARFGDLDVAMELLGQMEESGVAPDVVTWTSLVSGFVHMDRSD 267

Query: 184 ------IKLGMSCVRRVRNSVLAVYVKCG--KLIWARRFFESMDEKDG-----VAWNSMI 230
                 I++ ++ V     S+      C   KL+   +   S   K G     ++ NS++
Sbjct: 268 EALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAKELHSHAIKVGSVNNVLSGNSLV 327

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT 290
             Y + GE   A R+F  +  ++I     ++N +I  Y Q G C  A E+  +ME+ G+ 
Sbjct: 328 DMYAKCGEIVAAWRIFSGIPDKDI----FSWNSMISGYAQAGYCGKAYELFCKMENYGVR 383

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV-------------------------- 324
            +V TW  MISG+ +NG   +A +LF+ M   GV                          
Sbjct: 384 RNVITWNTMISGYIRNGDDERAFELFQMMESHGVKRDTATWNILIAGSVHNGYYDRAIRI 443

Query: 325 ---------MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
                     P+ +TI S I A T+L A     EIH+         D  + N+LIN YSK
Sbjct: 444 FRQMQALLRRPDYITILSIIPAFTNLVASWKVREIHACIFHHNLELDGKIANALINAYSK 503

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
              L +A  VFDM   +++ SWN +I  +   G   +A +LF +M++  V P+  T   +
Sbjct: 504 SGNLASACAVFDMHSSRNIISWNCIILAHVLHGSPNEALDLFCQMKQEGVVPDHTTLVTV 563

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           I  Y   G   E    F  M  +  +      + +++    + G+   A  +  +M
Sbjct: 564 IKAYGLTGKVSEGSQTFFNMANDYNITPELDHYAAMVDLLGRSGRLKEAYELIDEM 619


>gi|30103011|gb|AAP21424.1| putative pentatricopeptide repeat containing protein [Oryza sativa
           Japonica Group]
 gi|222626012|gb|EEE60144.1| hypothetical protein OsJ_13038 [Oryza sativa Japonica Group]
 gi|374087691|gb|AEY82646.1| chloroplast ALBL [Oryza sativa Japonica Group]
          Length = 859

 Score =  676 bits (1743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/795 (46%), Positives = 508/795 (63%), Gaps = 28/795 (3%)

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           E     +TKL++V++  G L DAREVF+ M  R+L  WSAMIGAY+    + +V+ L   
Sbjct: 79  EPRFVAETKLITVHSCAGRLGDAREVFDGMGRRDLLAWSAMIGAYAIRGMYSDVLALAVT 138

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRRVR--NSVLAVYVK 204
           MV++G+ PD FL  +ILQAC    D E G+ +HS+ I+ G M  V+ V   NSVL +Y K
Sbjct: 139 MVEEGVLPDRFLITRILQACAYAEDLELGRALHSMAIRRGFMGRVKDVPVGNSVLVMYAK 198

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
           CG L WAR+ F+ M  +D   WNSMI GY +  E +EA  L D M +E  + GVVT+N L
Sbjct: 199 CGDLGWARKVFDKMVCRDLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTL 258

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
           I SY + G  DVAME++ +ME  G+ PDV TWT ++SGF    R+ +AL  F  M   GV
Sbjct: 259 ISSYARFGDLDVAMELLGQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGV 318

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            PNG++I  AISAC  LK L    E+HS A+K+G  ++VL GNSL++MY+KC E+ AA R
Sbjct: 319 EPNGMSIACAISACASLKLLNQAKELHSHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAWR 378

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           +F  I DKD++SWNSMI+GY QAGYCGKAYELF KM+   V  NVITWN +ISGYI+NG+
Sbjct: 379 IFSGIPDKDIFSWNSMISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGD 438

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
           ++ A +LFQ M ++  VKR+TA+WN LIAG    G  + A+ +FR+MQ+    P+ +TIL
Sbjct: 439 DERAFELFQMM-ESHGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPDYITIL 497

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           S++PA   LVAS KV+EIH C+   +LE    + N+LI+ Y+KSGN+  +  +FD  SS+
Sbjct: 498 SIIPAFTNLVASWKVREIHACIFHHNLELDGKIANALINAYSKSGNLASACAVFDMHSSR 557

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           +II+WN +I  +VLHG  + ALDLF QMK  G+ P+  T +++I A+ L G V  G + F
Sbjct: 558 NIISWNCIILAHVLHGSPNEALDLFCQMKQEGVVPDHTTLVTVIKAYGLTGKVSEGSQTF 617

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
            ++   Y I P ++HY+AM+DL GRSG+L+EA E I++MP+ P+S++W+  LTA  +HGN
Sbjct: 618 FNMANDYNITPELDHYAAMVDLLGRSGRLKEAYELIDEMPLIPNSTVWDTFLTAAVMHGN 677

Query: 685 IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN--SFGQCW 742
           + LA LA   L  ++PGD  +QRL   +  + GK  D   V +    N  RN      C 
Sbjct: 678 VRLAHLAARELSAIDPGDPRVQRLGSSLQDLTGKTVD---VPEEMTPNKGRNLDEVESCS 734

Query: 743 IEVKNLVYTFVTG---GWSESYSDLLYSWLQNVPENVTARSSHSGLCI------EEEEKE 793
           IE++N VY F  G   G  ++ ++L         +++  +  HS L I       EEEKE
Sbjct: 735 IEIRNKVYVFSNGDNVGLEDTVAEL---------KSMMFKMGHSMLDIGIGTLDVEEEKE 785

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
           E+ G+H EKLA+AF L  S Q    IRI+K  RMC HCH  AK VS  +   I + D KC
Sbjct: 786 EVVGVHCEKLAIAFGLSNSPQF-KNIRIIKTARMCNHCHTFAKLVSEKYGRHILIKDPKC 844

Query: 854 LHHFKNGQCSCGDYW 868
           LH F++G+CSC DYW
Sbjct: 845 LHKFEDGKCSCEDYW 859



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 224/536 (41%), Gaps = 86/536 (16%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA------FLNLVTEI 89
           G  ++ + +  ++  +G    R     +LQAC  +  + L R LH+      F+  V   
Sbjct: 127 GMYSDVLALAVTMVEEGVLPDRFLITRILQACAYAEDLELGRALHSMAIRRGFMGRVK-- 184

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DV V   +L +YAKCG L  AR+VF+ M  R+L TW++MI  Y R   W E   L   M 
Sbjct: 185 DVPVGNSVLVMYAKCGDLGWARKVFDKMVCRDLGTWNSMIFGYCRSAEWEEARHLLDSMR 244

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEA-----GKLMHSLV--------------------- 183
           Q+G  P    +  ++ +    GD +      G++  S V                     
Sbjct: 245 QEGTQPGVVTWNTLISSYARFGDLDVAMELLGQMEESGVAPDVVTWTSLVSGFVHMDRSD 304

Query: 184 ------IKLGMSCVRRVRNSVLAVYVKCG--KLIWARRFFESMDEKDG-----VAWNSMI 230
                 I++ ++ V     S+      C   KL+   +   S   K G     ++ NS++
Sbjct: 305 EALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAKELHSHAIKVGSVNNVLSGNSLV 364

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT 290
             Y + GE   A R+F  +  ++I     ++N +I  Y Q G C  A E+  +ME+ G+ 
Sbjct: 365 DMYAKCGEIVAAWRIFSGIPDKDI----FSWNSMISGYAQAGYCGKAYELFCKMENYGVR 420

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV-------------------------- 324
            +V TW  MISG+ +NG   +A +LF+ M   GV                          
Sbjct: 421 RNVITWNTMISGYIRNGDDERAFELFQMMESHGVKRDTATWNILIAGSVHNGYYDRAIRI 480

Query: 325 ---------MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
                     P+ +TI S I A T+L A     EIH+         D  + N+LIN YSK
Sbjct: 481 FRQMQALLRRPDYITILSIIPAFTNLVASWKVREIHACIFHHNLELDGKIANALINAYSK 540

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
              L +A  VFDM   +++ SWN +I  +   G   +A +LF +M++  V P+  T   +
Sbjct: 541 SGNLASACAVFDMHSSRNIISWNCIILAHVLHGSPNEALDLFCQMKQEGVVPDHTTLVTV 600

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           I  Y   G   E    F  M  +  +      + +++    + G+   A  +  +M
Sbjct: 601 IKAYGLTGKVSEGSQTFFNMANDYNITPELDHYAAMVDLLGRSGRLKEAYELIDEM 656


>gi|302142563|emb|CBI19766.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/550 (62%), Positives = 403/550 (73%), Gaps = 56/550 (10%)

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   G+ PNGVT+TS ISAC  LKAL  GME+HS+AVK+G  +D+LVGNSLI+MYSK  E
Sbjct: 1   MLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGE 60

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           LE A RVFDMI  KDVY+WNSMI GYCQAGYCGKAY+LFIKM ESDVPPNV+TWN +ISG
Sbjct: 61  LEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISG 120

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
           YIQNG+ED+A+DLF RM K+  +KR+TASWNSLIAGY Q G KN ALG+FR+MQS C  P
Sbjct: 121 YIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRP 180

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           N VT+LS+LPACA LVA+ KVKEIHGC+LRR+L S L V N LIDTYAKSGNIVY++TIF
Sbjct: 181 NSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIF 240

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
            G+SSKDII+WNSLI GYVLHG   +ALDLFDQM   G+KP+RGTFLSII A SL+GMVD
Sbjct: 241 QGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVD 300

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            GK+VF S+ E YQI+P +EH+SAMIDL GRSGKL EA+EFIEDM IEPDS IW ALLTA
Sbjct: 301 KGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAALLTA 360

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
            +IHGNI LA         +  G+ L++                     LE  N    S 
Sbjct: 361 SKIHGNIGLA---------IRAGECLLE---------------------LEPSNF---SI 387

Query: 739 GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGI 798
            Q  +++  L   F                 ++ P+       H  L IEEEEKEEI G+
Sbjct: 388 HQQILQMYALSGKF-----------------EDAPDQ------HDRLFIEEEEKEEIGGV 424

Query: 799 HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
           HSEKLALAFALI  S AP ++RIVKN+RMC  CH TAK++SM++ CEI+L+DSKCLH FK
Sbjct: 425 HSEKLALAFALIDPSCAPRSVRIVKNLRMCGDCHGTAKFLSMLYSCEIYLSDSKCLHWFK 484

Query: 859 NGQCSCGDYW 868
           NG+CSCGDYW
Sbjct: 485 NGRCSCGDYW 494



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 188/361 (52%), Gaps = 8/361 (2%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR--VRNSVLAVYVKC 205
           M+  G+ P+       + AC +    + G  +HS+ +K+G  CV    V NS++ +Y K 
Sbjct: 1   MLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIG--CVEDLLVGNSLIDMYSKS 58

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G+L  ARR F+ + +KD   WNSMI GY Q G   +A+ LF KM   ++   VVT+N +I
Sbjct: 59  GELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMI 118

Query: 266 RSYNQLGQCDVAMEMVKRMESLG-ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
             Y Q G  D AM++  RME  G I  D  +W  +I+G+ QNG  ++AL +F++M    +
Sbjct: 119 SGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCI 178

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            PN VT+ S + AC +L A     EIH   ++     ++ V N LI+ Y+K   +  A+ 
Sbjct: 179 RPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQT 238

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           +F  I  KD+ SWNS+IAGY   G    A +LF +M +  V P+  T+  +I  +  +G 
Sbjct: 239 IFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGM 298

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM---QSSCFYPNCV 501
            D+   +F  M ++ ++       +++I    + G+   A+     M     SC +   +
Sbjct: 299 VDKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAIEPDSCIWAALL 358

Query: 502 T 502
           T
Sbjct: 359 T 359



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 142/336 (42%), Gaps = 73/336 (21%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T  + + AC    ++    +LH+    +  + D+ V   L+ +Y+K G L+DAR VF+ +
Sbjct: 12  TVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMI 71

Query: 118 RERNLYTWSAMIGAYSRDQ----------------------RWR-------------EVV 142
            ++++YTW++MIG Y +                         W              + +
Sbjct: 72  LKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAM 131

Query: 143 ELFFLMVQDGLF------------------------------------PDDFLFPKILQA 166
           +LF  M +DGL                                     P+      IL A
Sbjct: 132 DLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPA 191

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C N    +  K +H  +++  +     V N ++  Y K G +++A+  F+ +  KD ++W
Sbjct: 192 CANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQGISSKDIISW 251

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKR-ME 285
           NS+I+GY   G +D A  LFD+M +  +K    TF  +I +++  G  D   ++    ME
Sbjct: 252 NSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMME 311

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
              I P +   + MI    ++G+  +A++  ++M+ 
Sbjct: 312 DYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDMAI 347


>gi|108711657|gb|ABF99452.1| Calreticulin family protein, expressed [Oryza sativa Japonica
           Group]
          Length = 1111

 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 318/668 (47%), Positives = 439/668 (65%), Gaps = 9/668 (1%)

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
            +TKL++V++  G L DAREVF+ M  R+L  WSAMIGAY+    + +V+ L   MV++G
Sbjct: 84  AETKLITVHSCAGRLGDAREVFDGMGRRDLLAWSAMIGAYAIRGMYSDVLALAVTMVEEG 143

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRRVR--NSVLAVYVKCGKLI 209
           + PD FL  +ILQAC    D E G+ +HS+ I+ G M  V+ V   NSVL +Y KCG L 
Sbjct: 144 VLPDRFLITRILQACAYAEDLELGRALHSMAIRRGFMGRVKDVPVGNSVLVMYAKCGDLG 203

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
           WAR+ F+ M  +D   WNSMI GY +  E +EA  L D M +E  + GVVT+N LI SY 
Sbjct: 204 WARKVFDKMVCRDLGTWNSMIFGYCRSAEWEEARHLLDSMRQEGTQPGVVTWNTLISSYA 263

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           + G  DVAME++ +ME  G+ PDV TWT ++SGF    R+ +AL  F  M   GV PNG+
Sbjct: 264 RFGDLDVAMELLGQMEESGVAPDVVTWTSLVSGFVHMDRSDEALRCFIRMRLAGVEPNGM 323

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           +I  AISAC  LK L    E+HS A+K+G  ++VL GNSL++MY+KC E+ AA R+F  I
Sbjct: 324 SIACAISACASLKLLNQAKELHSHAIKVGSVNNVLSGNSLVDMYAKCGEIVAAWRIFSGI 383

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
            DKD++SWNSMI+GY QAGYCGKAYELF KM+   V  NVITWN +ISGYI+NG+++ A 
Sbjct: 384 PDKDIFSWNSMISGYAQAGYCGKAYELFCKMENYGVRRNVITWNTMISGYIRNGDDERAF 443

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           +LFQ M ++  VKR+TA+WN LIAG    G  + A+ +FR+MQ+    P+ +TILS++PA
Sbjct: 444 ELFQMM-ESHGVKRDTATWNILIAGSVHNGYYDRAIRIFRQMQALLRRPDYITILSIIPA 502

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
              LVAS KV+EIH C+   +LE    + N+LI+ Y+KSGN+  +  +FD  SS++II+W
Sbjct: 503 FTNLVASWKVREIHACIFHHNLELDGKIANALINAYSKSGNLASACAVFDMHSSRNIISW 562

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
           N +I  +VLHG  + ALDLF QMK  G+ P+  T +++I A+ L G V  G + F ++  
Sbjct: 563 NCIILAHVLHGSPNEALDLFCQMKQEGVVPDHTTLVTVIKAYGLTGKVSEGSQTFFNMAN 622

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            Y I P ++HY+AM+DL GRSG+L+EA E I++MP+ P+S++W+  LTA  +HGN+ LA 
Sbjct: 623 DYNITPELDHYAAMVDLLGRSGRLKEAYELIDEMPLIPNSTVWDTFLTAAVMHGNVRLAH 682

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN--SFGQCWIEVKN 747
           LA   L  ++PGD  +QRL   +  + GK  D   V +    N  RN      C IE++N
Sbjct: 683 LAARELSAIDPGDPRVQRLGSSLQDLTGKTVD---VPEEMTPNKGRNLDEVESCSIEIRN 739

Query: 748 LVYTFVTG 755
            VY F  G
Sbjct: 740 KVYVFSNG 747



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 144/555 (25%), Positives = 226/555 (40%), Gaps = 89/555 (16%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA------FLNLVTEI 89
           G  ++ + +  ++  +G    R     +LQAC  +  + L R LH+      F+  V   
Sbjct: 127 GMYSDVLALAVTMVEEGVLPDRFLITRILQACAYAEDLELGRALHSMAIRRGFMGRVK-- 184

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DV V   +L +YAKCG L  AR+VF+ M  R+L TW++MI  Y R   W E   L   M 
Sbjct: 185 DVPVGNSVLVMYAKCGDLGWARKVFDKMVCRDLGTWNSMIFGYCRSAEWEEARHLLDSMR 244

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEA-----GKLMHSLV--------------------- 183
           Q+G  P    +  ++ +    GD +      G++  S V                     
Sbjct: 245 QEGTQPGVVTWNTLISSYARFGDLDVAMELLGQMEESGVAPDVVTWTSLVSGFVHMDRSD 304

Query: 184 ------IKLGMSCVRRVRNSVLAVYVKCG--KLIWARRFFESMDEKDG-----VAWNSMI 230
                 I++ ++ V     S+      C   KL+   +   S   K G     ++ NS++
Sbjct: 305 EALRCFIRMRLAGVEPNGMSIACAISACASLKLLNQAKELHSHAIKVGSVNNVLSGNSLV 364

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT 290
             Y + GE   A R+F  +  ++I     ++N +I  Y Q G C  A E+  +ME+ G+ 
Sbjct: 365 DMYAKCGEIVAAWRIFSGIPDKDI----FSWNSMISGYAQAGYCGKAYELFCKMENYGVR 420

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV-------------------------- 324
            +V TW  MISG+ +NG   +A +LF+ M   GV                          
Sbjct: 421 RNVITWNTMISGYIRNGDDERAFELFQMMESHGVKRDTATWNILIAGSVHNGYYDRAIRI 480

Query: 325 ---------MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
                     P+ +TI S I A T+L A     EIH+         D  + N+LIN YSK
Sbjct: 481 FRQMQALLRRPDYITILSIIPAFTNLVASWKVREIHACIFHHNLELDGKIANALINAYSK 540

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
              L +A  VFDM   +++ SWN +I  +   G   +A +LF +M++  V P+  T   +
Sbjct: 541 SGNLASACAVFDMHSSRNIISWNCIILAHVLHGSPNEALDLFCQMKQEGVVPDHTTLVTV 600

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           I  Y   G   E    F  M  +  +   T   +   A    LG+       +  +    
Sbjct: 601 IKAYGLTGKVSEGSQTFFNMANDYNI---TPELDHYAAMVDLLGRSGRLKEAYELIDEMP 657

Query: 496 FYPNCVTILSVLPAC 510
             PN     + L A 
Sbjct: 658 LIPNSTVWDTFLTAA 672


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 329/912 (36%), Positives = 501/912 (54%), Gaps = 84/912 (9%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV--F 92
           NG LN A  +L S+           Y ++LQ C    ++ L  ++HA L +V  +DV  F
Sbjct: 67  NGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQL-VVNGVDVCEF 125

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           + ++LL VY + GC++DAR +F+ M ERN+++W+A++  Y     + E ++LF+LMV +G
Sbjct: 126 LGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEG 185

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + PD F+FPK+ +AC    ++  GK ++  ++ +G      V+ S+L +++KCG++  AR
Sbjct: 186 VRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIAR 245

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           RFFE ++ KD   WN M+SGY   GE  +A +    M    +K   VT+N +I  Y Q G
Sbjct: 246 RFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSG 305

Query: 273 QCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           Q + A +    M  L    P+V +WT +I+G  QNG   +AL +F++M   GV PN +TI
Sbjct: 306 QFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITI 365

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTD-DVLVGNSLINMYSKCEELEAAERVFDMIK 390
            SA+SACT+L  L  G EIH   +K+   D D+LVGNSL++ Y+KC  +E A R F MIK
Sbjct: 366 ASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIK 425

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
             D+ SWN+M+AGY   G   +A EL  +M+   + P++ITWN L++G+ Q G+   A++
Sbjct: 426 QTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALE 485

Query: 451 LFQRM---------------------------GKN-------DKVKRNTASWNSLIAGYQ 476
            FQRM                           GK        + ++ +T   ++LI+ Y 
Sbjct: 486 FFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYS 545

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY------------------------ 512
                  A  VF ++ +     + V   S++ ACA                         
Sbjct: 546 GCDSLEVACSVFSELSTR----DVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTV 601

Query: 513 -----------LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
                      L A  + KEIH  ++R  L++   ++NSLID Y + G+I  SR IFD M
Sbjct: 602 TMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLM 661

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
             +D+++WN +I  Y +HGF   A++LF Q ++ GLKPN  TF +++ A S +G+++ G 
Sbjct: 662 PQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGW 721

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
           K F  +   Y + P +E Y+ M+DL  R+G+  E +EFIE MP EP++++W +LL ACRI
Sbjct: 722 KYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRI 781

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H N DLA  A   LF+LEP       L+  IY+  G+ EDA K+R L +E       G  
Sbjct: 782 HCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCS 841

Query: 742 WIEVKNLVYTFVTGGWS----ESYSDLLYSWLQNVPENVTARSSHSGLC-IEEEEKEEIS 796
           WIEVK  +++FV G  S    E  S  + S   ++ E      ++  L  ++E+EKE   
Sbjct: 842 WIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSL 901

Query: 797 GIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHH 856
             HSEK+ALAF LI S+ A   +RI+KN+R+C  CH   K++S +   +I + D+   HH
Sbjct: 902 CGHSEKIALAFGLI-STTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHH 960

Query: 857 FKNGQCSCGDYW 868
           F +G CSCGDYW
Sbjct: 961 FVDGVCSCGDYW 972



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 151/676 (22%), Positives = 298/676 (44%), Gaps = 81/676 (11%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVT 87
           ++  CG G   E I +   +  +G +     +  + +AC +  +  + + ++ + L++  
Sbjct: 162 MEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGF 221

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           E +  VK  +L ++ KCG +D AR  FE++  ++++ W+ M+  Y+    +++ ++    
Sbjct: 222 EGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISD 281

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFE--------------------------AGKLMH- 180
           M   G+ PD   +  I+      G FE                          AG   + 
Sbjct: 282 MKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNG 341

Query: 181 ------SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE------SMDEKDG--VAW 226
                 S+  K+ +  V+    ++ +    C  L   R   E       ++E D   +  
Sbjct: 342 YDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG 401

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
           NS++  Y +    + A R F  + + ++    V++N ++  Y   G  + A+E++  M+ 
Sbjct: 402 NSLVDYYAKCRSVEVARRKFGMIKQTDL----VSWNAMLAGYALRGSHEEAIELLSEMKF 457

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
            GI PD+ TW  +++GF Q G    AL+ F+ M  +G+ PN  TI+ A++AC  ++ L +
Sbjct: 458 QGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKL 517

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G EIH   ++        VG++LI+MYS C+ LE A  VF  +  +DV  WNS+I+   Q
Sbjct: 518 GKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQ 577

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLIS-----GYIQNGNE---------------- 445
           +G    A +L  +M  S+V  N +T    +        ++ G E                
Sbjct: 578 SGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFI 637

Query: 446 -DEAVDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
            +  +D++ R G   K +        R+  SWN +I+ Y   G   +A+ +F++ ++   
Sbjct: 638 LNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGL 697

Query: 497 YPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
            PN +T  ++L AC++  +     K         +++ ++     ++D  +++G    + 
Sbjct: 698 KPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETL 757

Query: 556 TIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSL 613
              + M    +   W SL+    +H   +  L  +     F L+P + G ++ +   +S 
Sbjct: 758 EFIEKMPFEPNAAVWGSLLGACRIH--CNPDLAEYAARYLFELEPQSSGNYVLMANIYSA 815

Query: 614 AGMVDLGKKVFCSITE 629
           AG  +   K+ C + E
Sbjct: 816 AGRWEDAAKIRCLMKE 831



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 170/366 (46%), Gaps = 14/366 (3%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVF 92
           G+G+   A+     + + G      T    L AC    ++ L +++H + L    E+   
Sbjct: 478 GDGK--AALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTG 535

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V + L+S+Y+ C  L+ A  VF ++  R++  W+++I A ++  R    ++L   M    
Sbjct: 536 VGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSN 595

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           +  +       L AC        GK +H  +I+ G+     + NS++ +Y +CG +  +R
Sbjct: 596 VEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSR 655

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           R F+ M ++D V+WN MIS Y   G   +A  LF +     +K   +TF  L+ + +  G
Sbjct: 656 RIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSG 715

Query: 273 QCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
             +   +  K M++   + P V  + CM+   ++ G+ ++ L+  ++M F    PN    
Sbjct: 716 LIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPF---EPNAAVW 772

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFT-DDVLVGNSLI--NMYSKCEELEAAERVFDM 388
            S + AC     +    ++   A +  F  +    GN ++  N+YS     E A ++  +
Sbjct: 773 GSLLGACR----IHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCL 828

Query: 389 IKDKDV 394
           +K++ V
Sbjct: 829 MKERGV 834


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 314/892 (35%), Positives = 480/892 (53%), Gaps = 99/892 (11%)

Query: 16  LTKKSNPRFRDTHLDFLCG-----NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDS 70
           L K +N R R T   F  G     NG LN A  +L S+           Y ++LQ C   
Sbjct: 45  LRKLTNARQRIT--GFSGGGSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKL 102

Query: 71  NSIHLARKLHAFLNLVTEIDV--FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAM 128
            ++ L  ++HA L +V  +DV  F+ ++LL VY + GC++DAR +F+ M ERN+++W+A+
Sbjct: 103 YNLRLGFQVHAQL-VVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAI 161

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM 188
           +  Y     + E ++LF+LMV +G+ PD F+FPK+ +AC    ++  GK ++  ++ +G 
Sbjct: 162 MEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGF 221

Query: 189 SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
                V+ S+L +++KCG++  ARRFFE ++ KD   WN M+SGY   GE  +A +    
Sbjct: 222 EGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISD 281

Query: 249 MCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNG 307
           M    +K   VT+N +I  Y Q GQ + A +    M  L    P+V +WT +I+G  QNG
Sbjct: 282 MKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNG 341

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD-DVLVG 366
              +AL +F++M   GV PN +TI SA+SACT+L  L  G EIH   +K+   D D+LVG
Sbjct: 342 YDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG 401

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           NSL++ Y+KC  +E A R F MIK  D+ SWN+M+AGY   G   +A EL  +M+   + 
Sbjct: 402 NSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIE 461

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRM---------------------------GKN- 458
           P++ITWN L++G+ Q G+   A++ FQRM                           GK  
Sbjct: 462 PDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEI 521

Query: 459 ------DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
                 + ++ +T   ++LI+ Y        A  VF ++ +     + V   S++ ACA 
Sbjct: 522 HGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTR----DVVVWNSIISACAQ 577

Query: 513 -----------------------------------LVASNKVKEIHGCVLRRSLESSLPV 537
                                              L A  + KEIH  ++R  L++   +
Sbjct: 578 SGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFI 637

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
           +NSLID Y + G+I  SR IFD M  +D+++WN +I  Y +HGF   A++LF   ++ GL
Sbjct: 638 LNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGL 697

Query: 598 KPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
           KPN  TF +++ A S +G+++ G K F  +   Y + P +E Y+ M+DL  R+G+  E +
Sbjct: 698 KPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETL 757

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICG 717
           EFIE MP EP++++W +LL ACRIH N DLA  A   LF+LEP       L+  IY+  G
Sbjct: 758 EFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAG 817

Query: 718 KPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT 777
           + EDA K+R L +E       G  WIEVK  +++FV G  S             + E ++
Sbjct: 818 RWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHP-----------LMEQIS 866

Query: 778 ARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCV 829
            +     L ++E+EKE     HSEK+ALAF LI ++     +RI+KN+R+ V
Sbjct: 867 GKDGK--LDVDEDEKEFSLCGHSEKIALAFGLISTTXGT-PLRIIKNLRVSV 915


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 303/911 (33%), Positives = 463/911 (50%), Gaps = 89/911 (9%)

Query: 36   GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
            G   +A+ V D +  +  +    TY+++L+AC    ++   +K+HA  +    + DV V+
Sbjct: 198  GHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVE 257

Query: 95   TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
            T L+++Y KCG ++DA+ +F+ M ERN+ +W+ MIG  +   R +E   LF  M ++G  
Sbjct: 258  TALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFI 317

Query: 155  PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            P+ + +  IL A  + G  E  K +HS  +  G++   RV N+++ +Y K G +  AR  
Sbjct: 318  PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVV 377

Query: 215  FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------- 261
            F+ M E+D  +W  MI G  Q G   EA  LF +M R      + T+             
Sbjct: 378  FDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTS 437

Query: 262  ------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                    N LI  Y + G  D A  +   M       DV +W 
Sbjct: 438  ALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGM----CDRDVISWN 493

Query: 298  CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
             M+ G AQNG   +A  +F +M   G++P+  T  S ++      AL    E+H  AV+ 
Sbjct: 494  AMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVET 553

Query: 358  GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK-AYEL 416
            G   D  VG++ I+MY +C  ++ A  +FD +  + V +WN+MI G  Q   CG+ A  L
Sbjct: 554  GLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQ-RCGREALSL 612

Query: 417  FIKMQESDVPPNVITW----------------------------------NVLISGYIQN 442
            F++MQ     P+  T+                                  N L+  Y + 
Sbjct: 613  FLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKC 672

Query: 443  GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
            GN   A  +F     +D V+RN  +W  +I G  Q G  ++A   F +M      P+  T
Sbjct: 673  GNVKYAKQVF-----DDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATT 727

Query: 503  ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
             +S+L ACA   A   VKE+H   +   L S L V N+L+  YAK G+I  +R++FD M 
Sbjct: 728  YVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMV 787

Query: 563  SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
             +D+ +W  +I G   HG    ALD F +MKS G KPN  ++++++ A S AG+VD G++
Sbjct: 788  ERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRR 847

Query: 623  VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
             F S+T+ Y I P +EHY+ M+DL GR+G LEEA  FI +MPIEPD + W ALL AC  +
Sbjct: 848  QFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTY 907

Query: 683  GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
            GN+++A  A +    L+P       L+  IYA  GK E  L VR + +    R   G+ W
Sbjct: 908  GNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSW 967

Query: 743  IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS--SHSGLCI---EEEEKEEISG 797
            IEV N +++FV G  S   S  +Y+ L ++ E + A+     + L +   ++E KE+   
Sbjct: 968  IEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVPDTRLVLRNTDQEHKEQALC 1027

Query: 798  IHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF 857
             HSEKLA+ + L+  +Q+   IR+ KN+R+C  CH   K++S +   EI   D+K  HHF
Sbjct: 1028 SHSEKLAIVYGLM-HTQSKDPIRVYKNLRVCSDCHTATKFISKITGREIVARDAKRFHHF 1086

Query: 858  KNGQCSCGDYW 868
            K+G CSCGDYW
Sbjct: 1087 KDGVCSCGDYW 1097



 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 207/717 (28%), Positives = 346/717 (48%), Gaps = 85/717 (11%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL 98
           +A+ +L     QG  +   +Y+N+LQ C+    I LA+++H   +    E +++V  KLL
Sbjct: 101 DAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLL 160

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            VY +CG L  AR+VF+ + ++N+Y W+ MIG Y+      + + ++  M Q+   P++ 
Sbjct: 161 RVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEI 220

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
            +  IL+AC    + + GK +H+ +I+ G     RV  +++ +YVKCG +  A+  F+ M
Sbjct: 221 TYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKM 280

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
            E++ ++W  MI G    G   EA  LF +M RE       T+  ++ +    G    A+
Sbjct: 281 VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAG----AL 336

Query: 279 EMVKRMESLGITP-----------------------------------DVFTWTCMISGF 303
           E VK + S  +                                     D+F+WT MI G 
Sbjct: 337 EWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGL 396

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAI--SACTDLKALAMGMEIHSLAVKMGFTD 361
           AQ+GR  +A  LF +M   G +PN  T  S +  SA     AL     +H  A + GF  
Sbjct: 397 AQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFIS 456

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           D+ +GN+LI+MY+KC  ++ A  VFD + D+DV SWN+M+ G  Q G   +A+ +F++MQ
Sbjct: 457 DLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQ 516

Query: 422 ESDVPPNVITW-----------------------------------NVLISGYIQNGNED 446
           +  + P+  T+                                   +  I  YI+ G+ D
Sbjct: 517 QEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSID 576

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           +A  LF ++       R+  +WN++I G  Q      AL +F +MQ   F P+  T +++
Sbjct: 577 DARLLFDKLS-----VRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINI 631

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
           L A     A   VKE+H       L   L V N+L+ TY+K GN+ Y++ +FD M  +++
Sbjct: 632 LSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNV 690

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
            TW  +I G   HG  H A   F QM   G+ P+  T++SI+ A +  G ++  K+V   
Sbjct: 691 TTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNH 750

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
                 ++  +   +A++ +Y + G +++A    +DM +E D   W  ++     HG
Sbjct: 751 AVSA-GLVSDLRVGNALVHMYAKCGSIDDARSVFDDM-VERDVFSWTVMIGGLAQHG 805



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 194/697 (27%), Positives = 310/697 (44%), Gaps = 124/697 (17%)

Query: 139 REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV 198
           ++ V +  + VQ G+  D F +  ILQ C    D    K +H  +IK GM     V N +
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159

Query: 199 LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV 258
           L VY++CG+L  AR+ F+ + +K+   W +MI GY + G  ++A R++DKM +E  +   
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNE 219

Query: 259 VTF-----------------------------------NILIRSYNQLGQCDVAMEMVKR 283
           +T+                                     L+  Y + G  + A  +  +
Sbjct: 220 ITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDK 279

Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
           M    +  +V +WT MI G A  GR  +A  LF +M   G +PN  T  S ++A     A
Sbjct: 280 M----VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGA 335

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           L    E+HS AV  G   D+ VGN+L++MY+K   ++ A  VFD + ++D++SW  MI G
Sbjct: 336 LEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGG 395

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITW------------------------------- 432
             Q G   +A+ LF++MQ +   PN+ T+                               
Sbjct: 396 LAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFI 455

Query: 433 ------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALG 486
                 N LI  Y + G+ D+A  +F  M       R+  SWN+++ G  Q G  + A  
Sbjct: 456 SDLRIGNALIHMYAKCGSIDDARLVFDGM-----CDRDVISWNAMMGGLAQNGCGHEAFT 510

Query: 487 VFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
           VF +MQ     P+  T LS+L       A   V E+H   +   L S   V ++ I  Y 
Sbjct: 511 VFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYI 570

Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
           + G+I  +R +FD +S + + TWN++I G         AL LF QM+  G  P+  TF++
Sbjct: 571 RCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFIN 630

Query: 607 IILA-------------HSL---AGMVDL--GKKVFCSITECYQII-------PMIEH-- 639
           I+ A             HS    AG+VDL  G  +  + ++C  +         M+E   
Sbjct: 631 ILSANVDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNV 690

Query: 640 --YSAMIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLTACRIHGNIDLA------ 688
             ++ MI    + G   +A      M    I PD++ + ++L+AC   G ++        
Sbjct: 691 TTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNH 750

Query: 689 VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
            ++   + DL  G+ L+      +YA CG  +DA  V
Sbjct: 751 AVSAGLVSDLRVGNALV-----HMYAKCGSIDDARSV 782



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 225/478 (47%), Gaps = 41/478 (8%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACI--DSNSIHLARKLHAFLNLVTEI 89
           L  +GR  EA ++   +   G      TY+++L A     ++++   + +H        I
Sbjct: 396 LAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFI 455

Query: 90  -DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            D+ +   L+ +YAKCG +DDAR VF+ M +R++ +W+AM+G  +++    E   +F  M
Sbjct: 456 SDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQM 515

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
            Q+GL PD   +  +L   G+    E    +H   ++ G+    RV ++ + +Y++CG +
Sbjct: 516 QQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSI 575

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------- 261
             AR  F+ +  +    WN+MI G  Q     EA  LF +M RE       TF       
Sbjct: 576 DDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSAN 635

Query: 262 ---------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                                      N L+ +Y++ G    A ++   M    +  +V 
Sbjct: 636 VDEEALEWVKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKYAKQVFDDM----VERNVT 691

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           TWT MI G AQ+G    A   F +M   G++P+  T  S +SAC    AL    E+H+ A
Sbjct: 692 TWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHA 751

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           V  G   D+ VGN+L++MY+KC  ++ A  VFD + ++DV+SW  MI G  Q G   +A 
Sbjct: 752 VSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEAL 811

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
           + F+KM+     PN  ++  +++     G  DE    F  M ++  ++     +  ++
Sbjct: 812 DFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMV 869


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 288/903 (31%), Positives = 476/903 (52%), Gaps = 82/903 (9%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLS 99
           A+ V+  +  QGA+V  + Y+ +L+ CI+   +   R++H   +   T  D +    L++
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 100 VYAKCGCLDDAREVFEDMR--ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           +Y +CG +++AR+V++ +   ER +++W+AM+  Y +     + ++L   M Q GL PD 
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
                 L +C + G  E G+ +H   ++ G+    +V N +L +Y KCG +  AR  F+ 
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDK 186

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY--------- 268
           M++K  V+W   I GY   G ++ A  +F KM +E +    +T+  ++ ++         
Sbjct: 187 MEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWG 246

Query: 269 --------NQLGQCDVAM--EMVKRMESLG------------ITPDVFTWTCMISGFAQN 306
                   N   + D A+   +VK     G            +  D+  W  MI G A+ 
Sbjct: 247 KAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 306

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           G   +A +++ +M   GVMPN +T    ++AC +  AL  G EIHS   K GFT D+ V 
Sbjct: 307 GYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQ 366

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           N+LI+MYS+C  ++ A  VFD +  KDV SW +MI G  ++G+  +A  ++ +MQ++ V 
Sbjct: 367 NALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVE 426

Query: 427 PNVITW-----------------------------------NVLISGYIQNGNEDEAVDL 451
           PN +T+                                   N L++ Y   G+  +A  +
Sbjct: 427 PNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQV 486

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           F RM     ++R+  ++N++I GY        AL +F ++Q     P+ VT +++L ACA
Sbjct: 487 FDRM-----IQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACA 541

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
              +    +EIH  V +    S   V N+L+ TYAK G+   +  +F+ M+ +++I+WN+
Sbjct: 542 NSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNA 601

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
           +I G   HG    AL LF++MK  G+KP+  TF+S++ A S AG+++ G++ FCS+++ +
Sbjct: 602 IIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDF 661

Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
            IIP IEHY  M+DL GR+G+L+EA   I+ MP + ++ IW ALL ACRIHGN+ +A  A
Sbjct: 662 AIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERA 721

Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
            E    L+  + ++   +  +YA  G  + A K+RKL  +       G+ WI+V + ++ 
Sbjct: 722 AESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHY 781

Query: 752 FVTGGWSESYSDLLYSWLQNVPENVTARS----SHSGLC-IEEEEKEEISGIHSEKLALA 806
           FV    S   S+ +Y+ L  +   +  +     + S +  ++E EKE     HSE+LA+A
Sbjct: 782 FVAEDRSHPQSEKIYAELDRLTHAMKMKGYVPDTRSVMHDVDEGEKENAVCHHSERLAIA 841

Query: 807 FALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCG 865
           + LI  S  P T I I KN+R+C  CH   K++S +   EI   D    HHFK+G CSCG
Sbjct: 842 YGLI--STPPGTRIHIFKNLRVCPDCHTATKFISKIVDREIIARDVNRFHHFKDGVCSCG 899

Query: 866 DYW 868
           DYW
Sbjct: 900 DYW 902



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 157/544 (28%), Positives = 271/544 (49%), Gaps = 72/544 (13%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVK 94
           G + +A+ +L  +   G    R T ++ L +C    ++   R++H   +      DV V 
Sbjct: 105 GYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVA 164

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             +L++YAKCG +++AREVF+ M ++++ +W+  IG Y+   R     E+F  M Q+G+ 
Sbjct: 165 NCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVV 224

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+   +  +L A  +    + GK +HS ++  G      V  +++ +Y KCG     R+ 
Sbjct: 225 PNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQV 284

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS------- 267
           FE +  +D +AWN+MI G  + G  +EA  ++++M RE +    +T+ IL+ +       
Sbjct: 285 FEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAAL 344

Query: 268 ---------------YNQLGQCDVAMEMVKRMESLG---------ITPDVFTWTCMISGF 303
                           + +G  +  + M  R  S+          +  DV +WT MI G 
Sbjct: 345 HWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGL 404

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
           A++G  ++AL +++EM   GV PN VT TS ++AC+   AL  G  IH   V+ G   D 
Sbjct: 405 AKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDA 464

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
            VGN+L+NMYS C  ++ A +VFD +  +D+ ++N+MI GY       +A +LF ++QE 
Sbjct: 465 HVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEE 524

Query: 424 DVPPNVITW-----------------------------------NVLISGYIQNGNEDEA 448
            + P+ +T+                                   N L+S Y + G+  +A
Sbjct: 525 GLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDA 584

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
             +F++M      KRN  SWN++I G  Q G+  +AL +F +M+     P+ VT +S+L 
Sbjct: 585 SIVFEKM-----TKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLS 639

Query: 509 ACAY 512
           AC++
Sbjct: 640 ACSH 643



 Score =  229 bits (584), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 153/540 (28%), Positives = 251/540 (46%), Gaps = 55/540 (10%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           GR   A  +   +  +G    R TYI++L A     ++   + +H+  LN   E D  V 
Sbjct: 206 GRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVG 265

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T L+ +YAKCG   D R+VFE +  R+L  W+ MIG  +    W E  E++  M ++G+ 
Sbjct: 266 TALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVM 325

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+   +  +L AC N      GK +HS V K G +    V+N+++++Y +CG +  AR  
Sbjct: 326 PNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLV 385

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------- 261
           F+ M  KD ++W +MI G  + G   EA  ++ +M +  ++   VT+             
Sbjct: 386 FDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAAL 445

Query: 262 ----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                                 N L+  Y+  G    A ++  RM    I  D+  +  M
Sbjct: 446 EWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM----IQRDIVAYNAM 501

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I G+A +    +AL LF  +   G+ P+ VT  + ++AC +  +L    EIH+L  K GF
Sbjct: 502 IGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGF 561

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             D  VGN+L++ Y+KC     A  VF+ +  ++V SWN++I G  Q G    A +LF +
Sbjct: 562 FSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFER 621

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M+   V P+++T+  L+S     G  +E    F  M ++  +      +  ++    + G
Sbjct: 622 MKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAG 681

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG--CVLRRSLESSLPV 537
           Q + A  + + M    F  N     ++L AC           IHG   V  R+ ESSL +
Sbjct: 682 QLDEAEALIKTMP---FQANTRIWGALLGAC----------RIHGNVPVAERAAESSLKL 728



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 223/485 (45%), Gaps = 51/485 (10%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +  L   G   EA  V + +  +G    + TY+ LL AC++S ++H  +++H+ +  
Sbjct: 297 NTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAK 356

Query: 86  VT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
                D+ V+  L+S+Y++CG + DAR VF+ M  +++ +W+AMIG  ++     E + +
Sbjct: 357 AGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTV 416

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           +  M Q G+ P+   +  IL AC +    E G+ +H  V++ G++    V N+++ +Y  
Sbjct: 417 YQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSM 476

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--- 261
           CG +  AR+ F+ M ++D VA+N+MI GY       EA +LFD++  E +K   VT+   
Sbjct: 477 CGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINM 536

Query: 262 --------------------------------NILIRSYNQLGQCDVAMEMVKRMESLGI 289
                                           N L+ +Y + G    A  + ++M     
Sbjct: 537 LNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKM----T 592

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             +V +W  +I G AQ+GR   AL LF+ M   GV P+ VT  S +SAC+    L  G  
Sbjct: 593 KRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRR 652

Query: 350 IH-SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAGYCQ- 406
              S++        +     ++++  +  +L+ AE +   +    +   W +++ G C+ 
Sbjct: 653 YFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALL-GACRI 711

Query: 407 ---AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
                   +A E  +K+       N + +  L   Y   G  D A  L + M +    K 
Sbjct: 712 HGNVPVAERAAESSLKLDLD----NAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKE 767

Query: 464 NTASW 468
              SW
Sbjct: 768 PGRSW 772


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 298/911 (32%), Positives = 462/911 (50%), Gaps = 89/911 (9%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           G   +A+ V   +  +G +    TY+++L+AC    S+   +K+HA  +    + DV V+
Sbjct: 9   GYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVE 68

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T L+++Y KCG +DDA+ +F+ M ERN+ +W+ MIG  +   R +E    F  M ++G  
Sbjct: 69  TALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFI 128

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+ + +  IL A  + G  E  K +HS  +  G++   RV N+++ +Y K G +  AR  
Sbjct: 129 PNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVV 188

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------- 261
           F+ M E+D  +W  MI G  Q G   EA  LF +M R      + T+             
Sbjct: 189 FDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTG 248

Query: 262 ------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                   N LI  Y + G  D A  +   M       DV +W 
Sbjct: 249 ALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGM----CDRDVISWN 304

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            MI G AQNG   +A  +F +M   G +P+  T  S ++      A     E+H  AV++
Sbjct: 305 AMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEV 364

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK-AYEL 416
           G   D+ VG++ ++MY +C  ++ A+ +FD +  ++V +WN+MI G  Q   CG+ A  L
Sbjct: 365 GLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQ-KCGREALSL 423

Query: 417 FIKMQESDVPPNVITW----------------------------------NVLISGYIQN 442
           F++M+     P+  T+                                  N L+  Y + 
Sbjct: 424 FLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLRVGNALVHMYAKC 483

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           GN   A  +F     +D V+RN  +W  +I+G  Q G  + A  +F +M      P+  T
Sbjct: 484 GNTMYAKQVF-----DDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATT 538

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
            +S+L ACA   A   VKE+H   +   L S L V N+L+  YAK G++  +R +FD M 
Sbjct: 539 YVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDML 598

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            +D+ +W  +I G   HG    ALDLF +MK  G KPN  +F++++ A S AG+VD G++
Sbjct: 599 ERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRR 658

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F S+T+ Y I P +EHY+ M+DL GR+G+LEEA  FI +MPIEP  + W ALL AC  +
Sbjct: 659 QFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTY 718

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
           GN+++A  A +    L+P       L+  IYA  G  E  L VR + +    R   G+ W
Sbjct: 719 GNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSW 778

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS--SHSGLCI---EEEEKEEISG 797
           IEV N +++FV G  S   S  +Y+ L+++ + + A      + L +   ++E KE+   
Sbjct: 779 IEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVPDTRLVLRNTDQEYKEQALC 838

Query: 798 IHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF 857
            HSEKLA+ + L+  +   + IR+ KN+R+C  CH   K++S +   EI   D+K  HHF
Sbjct: 839 SHSEKLAIVYGLM-HTPYRNPIRVYKNLRVCSDCHTATKFISKVTGREIVARDAKRFHHF 897

Query: 858 KNGQCSCGDYW 868
           K+G CSCGDYW
Sbjct: 898 KDGVCSCGDYW 908



 Score =  268 bits (685), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 186/654 (28%), Positives = 300/654 (45%), Gaps = 105/654 (16%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           ++  YA+ G  +DA +V+  MR                               ++G  P+
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMR-------------------------------REGGQPN 29

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           +  +  IL+AC +    + GK +H+ +I+ G     RV  +++ +YVKCG +  A+  F+
Sbjct: 30  EITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFD 89

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------------- 261
            M E++ ++W  MI G    G   EA   F +M RE       T+               
Sbjct: 90  KMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEW 149

Query: 262 --------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                               N L+  Y + G  D A  +   M    +  D+F+WT MI 
Sbjct: 150 VKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGM----VERDIFSWTVMIG 205

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI--SACTDLKALAMGMEIHSLAVKMGF 359
           G AQ+GR  +A  LF +M   G +PN  T  S +  SA T   AL    E+H  A K GF
Sbjct: 206 GLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGF 265

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             D+ VGN+LI+MY+KC  ++ A  VFD + D+DV SWN+MI G  Q G   +A+ +F+K
Sbjct: 266 ISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLK 325

Query: 420 MQESDVPPNVITWNVLISGYIQNGN-------EDEAVD---------------LFQRMGK 457
           MQ+    P+  T+  L++ ++  G           AV+               ++ R G 
Sbjct: 326 MQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGS 385

Query: 458 NDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
            D  +        RN  +WN++I G  Q      AL +F +M+   F+P+  T +++L A
Sbjct: 386 IDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSA 445

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
                A   VKE+H   +   L   L V N+L+  YAK GN +Y++ +FD M  +++ TW
Sbjct: 446 NVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTW 504

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
             +I G   HG  H A  LF QM   G+ P+  T++SI+ A +  G ++  K+V      
Sbjct: 505 TVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVN 564

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
              ++  +   +A++ +Y + G +++A    +DM +E D   W  ++     HG
Sbjct: 565 A-GLVSDLRVGNALVHMYAKCGSVDDARRVFDDM-LERDVYSWTVMIGGLAQHG 616



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 131/267 (49%), Gaps = 10/267 (3%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  +G  +EA ++   +  +G      TY+++L AC  + ++   +++H+  +N     D
Sbjct: 511 LAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSD 570

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           + V   L+ +YAKCG +DDAR VF+DM ER++Y+W+ MIG  ++  R  + ++LF  M  
Sbjct: 571 LRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKL 630

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMH-SLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           +G  P+ + F  +L AC + G  + G+    SL    G+         ++ +  + G+L 
Sbjct: 631 EGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLE 690

Query: 210 WARRFFESMDEKDGVA-WNSMISGYFQIGENDEAHRLFDKMCREEIKL---GVVTFNILI 265
            A+ F  +M  + G A W +++      G  + A    +   +E +KL      T+ +L 
Sbjct: 691 EAKHFILNMPIEPGDAPWGALLGACVTYGNLEMA----EFAAKERLKLKPKSASTYVLLS 746

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPD 292
             Y   G  +  + +   M+  GI  +
Sbjct: 747 NIYAATGNWEQKLLVRSMMQRRGIRKE 773


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 286/919 (31%), Positives = 474/919 (51%), Gaps = 86/919 (9%)

Query: 26   DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LN 84
            +T L        + E I +   ++++G    + TYINLL A    + +   +++H   +N
Sbjct: 253  NTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVN 312

Query: 85   LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
                 D+ V T L +++ +CG +  A++  E   +R++  ++A+I A ++   + E  E 
Sbjct: 313  EGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQ 372

Query: 145  FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
            ++ M  DG+  +   +  +L AC       AG+L+HS + ++G S   ++ NS++++Y +
Sbjct: 373  YYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYAR 432

Query: 205  CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--- 261
            CG L  AR  F +M ++D ++WN++I+GY +  +  EA +L+ +M  E +K G VTF   
Sbjct: 433  CGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHL 492

Query: 262  ------------------NIL---IRSYNQLGQCDVAMEMVKR----MESLGI-----TP 291
                              +IL   I+S   L   +  M M +R    ME+  +       
Sbjct: 493  LSACTNSSAYSDGKMIHEDILRSGIKSNGHL--ANALMNMYRRCGSIMEAQNVFEGTRAR 550

Query: 292  DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
            D+ +W  MI+G AQ+G    A  LF EM   G+ P+ +T  S +  C + +AL +G +IH
Sbjct: 551  DIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIH 610

Query: 352  SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
             L ++ G   DV +GN+LINMY +C  L+ A  VF  ++ ++V SW +MI G+   G   
Sbjct: 611  MLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDR 670

Query: 412  KAYELFIKMQESDVPPNVITW-----------------------------------NVLI 436
            KA+ELF +MQ     P   T+                                   N LI
Sbjct: 671  KAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALI 730

Query: 437  SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
            S Y ++G+  +A  +F +M       R+  SWN +IAGY Q G    AL    +MQ    
Sbjct: 731  SAYSKSGSMTDARKVFDKM-----PNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGV 785

Query: 497  YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
              N  + +S+L AC+   A  + K +H  +++R ++  + V  +LI  YAK G++  ++ 
Sbjct: 786  VLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQE 845

Query: 557  IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
            +FD  + K+++TWN++I  Y  HG    ALD F+ M   G+KP+  TF SI+ A + +G+
Sbjct: 846  VFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGL 905

Query: 617  VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
            V  G ++F S+   + + P IEHY  ++ L GR+G+ +EA   I  MP  PD+++WE LL
Sbjct: 906  VMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLL 965

Query: 677  TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
             ACRIHGN+ LA  A      L   +  +  L+  +YA  G+ +D  K+R++      R 
Sbjct: 966  GACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRK 1025

Query: 737  SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------IEEE 790
              G+ WIEV N+++ F+    S   +  +Y  L+ +   +  R+ +S         +++E
Sbjct: 1026 EPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEME-RAGYSPDTQYVLHNLDKE 1084

Query: 791  EKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
             +E     HSE+LA+A+ L+ +   P T IRI KN+R+C  CH  +K++S +   EI   
Sbjct: 1085 HQETSLCTHSERLAIAYGLLKT--PPGTPIRIFKNLRICGDCHTASKFISKLVGREIIAR 1142

Query: 850  DSKCLHHFKNGQCSCGDYW 868
            DS   H FKNG+CSC D+W
Sbjct: 1143 DSNRFHTFKNGKCSCEDFW 1161



 Score =  306 bits (784), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 197/719 (27%), Positives = 346/719 (48%), Gaps = 82/719 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           G   +A  + + + T G    + TYI++L AC     +   +K+H+  +    + D  V+
Sbjct: 162 GFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQ 221

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             LL++Y KC  L  AR+VF  +  R++ +++ M+G Y++     E + LF  M  +G+ 
Sbjct: 222 NSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIP 281

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD   +  +L A       + GK +H L +  G++   RV  ++  ++V+CG +  A++ 
Sbjct: 282 PDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQA 341

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------- 261
            E+  ++D V +N++I+   Q G  +EA   + +M  + + +   T+             
Sbjct: 342 LEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKAL 401

Query: 262 ----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                                 N LI  Y + G    A E+   M       D+ +W  +
Sbjct: 402 GAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKR----DLISWNAI 457

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I+G+A+     +A+ L+K+M   GV P  VT    +SACT+  A + G  IH   ++ G 
Sbjct: 458 IAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGI 517

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             +  + N+L+NMY +C  +  A+ VF+  + +D+ SWNSMIAG+ Q G    AY+LF++
Sbjct: 518 KSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLE 577

Query: 420 MQESDVPPNVITW-----------------------------------NVLISGYIQNGN 444
           M++  + P+ IT+                                   N LI+ YI+ G+
Sbjct: 578 MKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGS 637

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
             +A ++F  +       RN  SW ++I G+   G+   A  +F +MQ+  F P   T  
Sbjct: 638 LQDAYEVFHSL-----RHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKSTFS 692

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           S+L AC      ++ K++   +L    E    V N+LI  Y+KSG++  +R +FD M ++
Sbjct: 693 SILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNR 752

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           DI++WN +I GY  +G    AL    QM+  G+  N+ +F+SI+ A S    ++ GK+V 
Sbjct: 753 DIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVH 812

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
             I +  ++   +   +A+I +Y + G LEEA E  ++   E +   W A++ A   HG
Sbjct: 813 AEIVK-RKMQGDVRVGAALISMYAKCGSLEEAQEVFDNF-TEKNVVTWNAMINAYAQHG 869



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 155/571 (27%), Positives = 277/571 (48%), Gaps = 74/571 (12%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           +  ++Q C         K +H+ +++ G+     + N ++ +YVKC  +  A + F  M 
Sbjct: 85  YVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMP 144

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKM--------------------CREEIKLGVV 259
            +D ++WNS+IS Y Q G   +A +LF++M                       E++ G  
Sbjct: 145 RRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKK 204

Query: 260 TFNILIRS------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
             + +I +             N  G+C+  +   +++ S     DV ++  M+  +AQ  
Sbjct: 205 IHSKIIEAGYQRDPRVQNSLLNMYGKCE-DLPSARQVFSGIYRRDVVSYNTMLGLYAQKA 263

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
              + + LF +MS  G+ P+ VT  + + A T    L  G  IH LAV  G   D+ VG 
Sbjct: 264 YVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGT 323

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           +L  M+ +C ++  A++  +   D+DV  +N++IA   Q G+  +A+E + +M+   V  
Sbjct: 324 ALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVM 383

Query: 428 NVITW-----------------------------------NVLISGYIQNGNEDEAVDLF 452
           N  T+                                   N LIS Y + G+   A +LF
Sbjct: 384 NRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELF 443

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
             M K D +     SWN++IAGY +   +  A+ ++++MQS    P  VT L +L AC  
Sbjct: 444 NTMPKRDLI-----SWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTN 498

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 572
             A +  K IH  +LR  ++S+  + N+L++ Y + G+I+ ++ +F+G  ++DII+WNS+
Sbjct: 499 SSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSM 558

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQ 632
           I G+  HG + AA  LF +MK  GL+P++ TF S+++       ++LG+++   I E   
Sbjct: 559 IAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGL 618

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
            +  +   +A+I++Y R G L++A E    +
Sbjct: 619 QLD-VNLGNALINMYIRCGSLQDAYEVFHSL 648


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 287/918 (31%), Positives = 477/918 (51%), Gaps = 91/918 (9%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-T 87
           L+ L   G+ NEA+ VL+ + +   ++ R TY  LLQ CI   ++    +++  +     
Sbjct: 82  LNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGV 141

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + D+F++  L+++YAKCG    A+++F+DMRE+++Y+W+ ++G Y +   + E  +L   
Sbjct: 142 QPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQ 201

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           MVQD + PD   F  +L AC +  + + G+ +++L++K G      V  +++ +++KCG 
Sbjct: 202 MVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGD 261

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           +  A + F+++  +D V W SMI+G  + G   +A  LF +M  E ++   V F  L+R+
Sbjct: 262 IGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRA 321

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVF-------------------------------TW 296
            N     +   ++  RM+ +G   +++                               +W
Sbjct: 322 CNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSW 381

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           T MI+GFAQ+GR  +A   F +M   G+ PN VT  S + AC+   AL  G +I    ++
Sbjct: 382 TAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIE 441

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G+  D  V  +L++MY+KC  L+ A RVF+ I  ++V +WN+MI  Y Q      A   
Sbjct: 442 AGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALAT 501

Query: 417 FIKMQESDVPPNVITW-----------------------------------NVLISGYIQ 441
           F  + +  + PN  T+                                   N L+S ++ 
Sbjct: 502 FQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVN 561

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G+   A +LF     ND  KR+  SWN++IAG+ Q G+   A   F+ MQ S   P+ +
Sbjct: 562 CGDLMSAKNLF-----NDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKI 616

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           T   +L ACA   A  + + +H  +   + +  + V   LI  Y K G+I  +  +F  +
Sbjct: 617 TFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKL 676

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
             K++ +W S+I GY  HG    AL+LF QM+  G+KP+  TF+  + A + AG+++ G 
Sbjct: 677 PKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGL 736

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
             F S+ E + I P +EHY  M+DL+GR+G L EA+EFI  M +EPDS +W ALL AC++
Sbjct: 737 HHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQV 795

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H N++LA  A ++  +L+P D  +  ++  IYA  G  ++  K+RK+  +       GQ 
Sbjct: 796 HLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQS 855

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPENVTARSSHSGLCIEEEE 791
           WIEV   V+TF +   +   ++ +++ L+           VP+  T    H    +E+ E
Sbjct: 856 WIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPD--TRYVLHD---VEDNE 910

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLAD 850
           KE+    HSE+LA+ + L+ +   P T I I KN+R+C  CH   K++S +   +I   D
Sbjct: 911 KEQALFYHSERLAITYGLLKT--PPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARD 968

Query: 851 SKCLHHFKNGQCSCGDYW 868
           S   HHFK+G CSCGD+W
Sbjct: 969 SNRFHHFKDGVCSCGDFW 986



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/502 (24%), Positives = 237/502 (47%), Gaps = 44/502 (8%)

Query: 257 GVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 316
           G+ T  +L  S++  G+C        R        D      +++  ++ G+ ++A+ + 
Sbjct: 46  GIETLRMLTTSFS--GRCPKG-----RCVVFADIKDTQKANAVLNRLSKAGQFNEAMQVL 98

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
           + +    +     T ++ +  C   K L  G  I++   K G   D+ + N+LINMY+KC
Sbjct: 99  ERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKC 158

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
               +A+++FD +++KDVYSWN ++ GY Q G   +A++L  +M +  V P+  T+  ++
Sbjct: 159 GNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSML 218

Query: 437 SGYIQNGNEDEAVDLFQ-------------------------RMGKNDKV-----KRNTA 466
           +      N D+  +L+                           +G   KV      R+  
Sbjct: 219 NACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLV 278

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           +W S+I G  + G+   A  +F++M+     P+ V  +S+L AC +  A  + K++H  +
Sbjct: 279 TWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARM 338

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
                ++ + V  +++  Y K G++  +  +FD +  +++++W ++I G+  HG    A 
Sbjct: 339 KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAF 398

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPMIEHYSAMID 645
             F++M   G++PNR TF+SI+ A S    +  G+++   I E  Y     +   +A++ 
Sbjct: 399 LFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TALLS 456

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           +Y + G L++A    E +  + +   W A++TA   H   D A+   + L  L+ G    
Sbjct: 457 MYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQAL--LKEGIKPN 513

Query: 706 QRLILQIYAICGKPEDALKVRK 727
                 I  +C K  D+L++ K
Sbjct: 514 SSTFTSILNVC-KSSDSLELGK 534



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 143/300 (47%), Gaps = 34/300 (11%)

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
           ++T   N+++    + GQ N A+ V  ++ SS       T  ++L  C         + I
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           +  + +  ++  + + N+LI+ YAK GN + ++ IFD M  KD+ +WN L+ GYV HG +
Sbjct: 133 YNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI--------------- 627
             A  L +QM    +KP++ TF+S++ A + A  VD G++++  I               
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252

Query: 628 -------------TECYQIIPM--IEHYSAMIDLYGRSGKLEEA---MEFIEDMPIEPDS 669
                        T+ +  +P   +  +++MI    R G+ ++A    + +E+  ++PD 
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312

Query: 670 SIWEALLTACRIHGNIDLAVLAIERLFDLE-PGDVLIQRLILQIYAICGKPEDALKVRKL 728
             + +LL AC     ++       R+ ++    ++ +   IL +Y  CG  EDAL+V  L
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDL 372


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 287/918 (31%), Positives = 476/918 (51%), Gaps = 91/918 (9%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-T 87
           L+ L   G+ NEA+ VL+ + +   ++ R TY  LLQ CI   ++    +++  +     
Sbjct: 82  LNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGV 141

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + D+F+   L+++YAKCG    A+++F+DMRE+++Y+W+ ++G Y +   + E  +L   
Sbjct: 142 QPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQ 201

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           MVQD + PD   F  +L AC +  + + G+ +++L++K G      V  +++ +++KCG 
Sbjct: 202 MVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGD 261

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           +  A + F+++  +D V W SMI+G  + G   +A  LF +M  E ++   V F  L+R+
Sbjct: 262 IGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRA 321

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVF-------------------------------TW 296
            N     +   ++  RM+ +G   +++                               +W
Sbjct: 322 CNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSW 381

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           T MI+GFAQ+GR  +A   F +M   G+ PN VT  S + AC+   AL  G +I    ++
Sbjct: 382 TAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIE 441

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G+  D  V  +L++MY+KC  L+ A RVF+ I  ++V +WN+MI  Y Q      A   
Sbjct: 442 AGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALAT 501

Query: 417 FIKMQESDVPPNVITW-----------------------------------NVLISGYIQ 441
           F  + +  + PN  T+                                   N L+S ++ 
Sbjct: 502 FQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVN 561

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G+   A +LF     ND  KR+  SWN++IAG+ Q G+   A   F+ MQ S   P+ +
Sbjct: 562 CGDLMSAKNLF-----NDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKI 616

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           T   +L ACA   A  + + +H  +   + +  + V   LI  Y K G+I  +  +F  +
Sbjct: 617 TFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKL 676

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
             K++ +W S+I GY  HG    AL+LF QM+  G+KP+  TF+  + A + AG+++ G 
Sbjct: 677 PKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGL 736

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
             F S+ E + I P +EHY  M+DL+GR+G L EA+EFI  M +EPDS +W ALL AC++
Sbjct: 737 HHFQSMKE-FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQV 795

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H N++LA  A ++  +L+P D  +  ++  IYA  G  ++  K+RK+  +       GQ 
Sbjct: 796 HLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQS 855

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPENVTARSSHSGLCIEEEE 791
           WIEV   V+TF +   +   ++ +++ L+           VP+  T    H    +E+ E
Sbjct: 856 WIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYVPD--TRYVLHD---VEDNE 910

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLAD 850
           KE+    HSE+LA+ + L+ +   P T I I KN+R+C  CH   K++S +   +I   D
Sbjct: 911 KEQALFYHSERLAITYGLLKT--PPLTPIVISKNLRVCGDCHTATKFISKITKRQIIARD 968

Query: 851 SKCLHHFKNGQCSCGDYW 868
           S   HHFK+G CSCGD+W
Sbjct: 969 SNRFHHFKDGVCSCGDFW 986



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/502 (24%), Positives = 237/502 (47%), Gaps = 44/502 (8%)

Query: 257 GVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 316
           G+ T  +L  S++  G+C        R        D      +++  ++ G+ ++A+ + 
Sbjct: 46  GIETLRMLTTSFS--GRCPKG-----RCVVFADIKDTQKANAVLNRLSKAGQFNEAMQVL 98

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
           + +    +     T ++ +  C   K L  G  I++   K G   D+ + N+LINMY+KC
Sbjct: 99  ERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKC 158

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
               +A+++FD +++KDVYSWN ++ GY Q G   +A++L  +M +  V P+  T+  ++
Sbjct: 159 GNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSML 218

Query: 437 SGYIQNGNEDEAVDLFQ-------------------------RMGKNDKV-----KRNTA 466
           +      N D+  +L+                           +G   KV      R+  
Sbjct: 219 NACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLV 278

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           +W S+I G  + G+   A  +F++M+     P+ V  +S+L AC +  A  + K++H  +
Sbjct: 279 TWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARM 338

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
                ++ + V  +++  Y K G++  +  +FD +  +++++W ++I G+  HG    A 
Sbjct: 339 KEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAF 398

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPMIEHYSAMID 645
             F++M   G++PNR TF+SI+ A S    +  G+++   I E  Y     +   +A++ 
Sbjct: 399 LFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVR--TALLS 456

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           +Y + G L++A    E +  + +   W A++TA   H   D A+   + L  L+ G    
Sbjct: 457 MYAKCGSLKDAHRVFEKIS-KQNVVAWNAMITAYVQHEQYDNALATFQAL--LKEGIKPN 513

Query: 706 QRLILQIYAICGKPEDALKVRK 727
                 I  +C K  D+L++ K
Sbjct: 514 SSTFTSILNVC-KSSDSLELGK 534



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 143/300 (47%), Gaps = 34/300 (11%)

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
           ++T   N+++    + GQ N A+ V  ++ SS       T  ++L  C         + I
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           +  + +  ++  + + N+LI+ YAK GN + ++ IFD M  KD+ +WN L+ GYV HG +
Sbjct: 133 YNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLY 192

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI--------------- 627
             A  L +QM    +KP++ TF+S++ A + A  VD G++++  I               
Sbjct: 193 EEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTAL 252

Query: 628 -------------TECYQIIPM--IEHYSAMIDLYGRSGKLEEA---MEFIEDMPIEPDS 669
                        T+ +  +P   +  +++MI    R G+ ++A    + +E+  ++PD 
Sbjct: 253 INMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDK 312

Query: 670 SIWEALLTACRIHGNIDLAVLAIERLFDLE-PGDVLIQRLILQIYAICGKPEDALKVRKL 728
             + +LL AC     ++       R+ ++    ++ +   IL +Y  CG  EDAL+V  L
Sbjct: 313 VAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDL 372


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 293/918 (31%), Positives = 470/918 (51%), Gaps = 84/918 (9%)

Query: 26   DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LN 84
            +T L        + E + +   ++++G    + TYINLL A    + +   +++H   + 
Sbjct: 198  NTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVE 257

Query: 85   LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
                 D+ V T L+++  +CG +D A++ F+   +R++  ++A+I A ++     E  E 
Sbjct: 258  EGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQ 317

Query: 145  FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
            ++ M  DG+  +   +  IL AC      EAGKL+HS + + G S   ++ N+++++Y +
Sbjct: 318  YYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYAR 377

Query: 205  CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--- 261
            CG L  AR  F +M ++D ++WN++I+GY +  +  EA RL+ +M  E +K G VTF   
Sbjct: 378  CGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHL 437

Query: 262  ------------------NIL---IRSYNQLGQCDVAMEMVKR----MESLGI-----TP 291
                              +IL   I+S   L   +  M M +R    ME+  +       
Sbjct: 438  LSACANSSAYADGKMIHEDILRSGIKSNGHLA--NALMNMYRRCGSLMEAQNVFEGTQAR 495

Query: 292  DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
            DV +W  MI+G AQ+G    A  LF+EM    + P+ +T  S +S C + +AL +G +IH
Sbjct: 496  DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIH 555

Query: 352  SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
                + G   DV +GN+LINMY +C  L+ A  VF  ++ +DV SW +MI G    G   
Sbjct: 556  GRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDM 615

Query: 412  KAYELFIKMQESDVPP----------------------NVITW-------------NVLI 436
            KA ELF +MQ     P                       VI +             N LI
Sbjct: 616  KAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALI 675

Query: 437  SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
            S Y ++G+  +A ++F +M   D V     SWN +IAGY Q G    A+    +MQ    
Sbjct: 676  SAYSKSGSMTDAREVFDKMPSRDIV-----SWNKIIAGYAQNGLGQTAVEFAYQMQEQDV 730

Query: 497  YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
             PN  + +S+L AC+   A  + K +H  +++R L+  + V  +LI  YAK G+   ++ 
Sbjct: 731  VPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQE 790

Query: 557  IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
            +FD +  K+++TWN++I  Y  HG    AL  F+ M+  G+KP+  TF SI+ A + AG+
Sbjct: 791  VFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGL 850

Query: 617  VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
            V  G ++F S+   Y ++P IEHY  ++ L GR+ + +EA   I  MP  PD+++WE LL
Sbjct: 851  VLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLL 910

Query: 677  TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
             ACRIHGNI LA  A      L   +  +  L+  +YA  G+ +D  K+R++      R 
Sbjct: 911  GACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRK 970

Query: 737  SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT-----ARSSHSGLCIEEEE 791
              G+ WIEV N+++ F+    S   +  +Y+ L+ +   +        + H    + +  
Sbjct: 971  EPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAH 1030

Query: 792  KEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLAD 850
            +E     HSE+LA+A+ LI +   P T IRI KN+R+C  CH  +K++S +   EI   D
Sbjct: 1031 QETSLCTHSERLAIAYGLIKTP--PGTPIRIFKNLRICGDCHTASKFISKLVGREIIARD 1088

Query: 851  SKCLHHFKNGQCSCGDYW 868
            S   H FKNG+CSC DYW
Sbjct: 1089 SNRFHSFKNGKCSCEDYW 1106



 Score =  311 bits (797), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 209/739 (28%), Positives = 358/739 (48%), Gaps = 73/739 (9%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDV 91
           CG  R +    V ++   +  +  R TY+ LLQ C     +  A+++HA  +      D+
Sbjct: 7   CGPDRED----VSNTHQPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDI 62

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           F+   L+++Y KC  + DA +VF++M  R++ +W+++I  Y++    ++  +LF  M   
Sbjct: 63  FLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNA 122

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G  P+   +  IL AC +  + E GK +HS +IK G     RV+NS+L++Y KCG L  A
Sbjct: 123 GFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRA 182

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R+ F  +  +D V++N+M+  Y Q     E   LF +M  E I    VT+  L+ ++   
Sbjct: 183 RQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTP 242

Query: 272 GQCDVAMEMVKRMESLGITP-------------------------------DVFTWTCMI 300
              D    + K     G+                                 DV  +  +I
Sbjct: 243 SMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALI 302

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +  AQ+G   +A + +  M   GV  N  T  S ++AC+  KAL  G  IHS   + G +
Sbjct: 303 AALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHS 362

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            DV +GN+LI+MY++C +L  A  +F  +  +D+ SWN++IAGY +    G+A  L+ +M
Sbjct: 363 SDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM 422

Query: 421 QESDVPPNVITW---------------------NVLISGYIQNGNEDEAV-DLFQRMGK- 457
           Q   V P  +T+                     ++L SG   NG+   A+ ++++R G  
Sbjct: 423 QSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSL 482

Query: 458 -------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                       R+  SWNS+IAG+ Q G    A  +F++MQ+    P+ +T  SVL  C
Sbjct: 483 MEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGC 542

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
               A    K+IHG +    L+  + + N+LI+ Y + G++  +R +F  +  +D+++W 
Sbjct: 543 KNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWT 602

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI-TE 629
           ++I G    G    A++LF QM++ G +P + TF SI+   + +  +D GKKV   I   
Sbjct: 603 AMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNS 662

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            Y++   +   +A+I  Y +SG + +A E  + MP   D   W  ++     +G   L  
Sbjct: 663 GYELDTGVG--NALISAYSKSGSMTDAREVFDKMPSR-DIVSWNKIIAGYAQNG---LGQ 716

Query: 690 LAIERLFDLEPGDVLIQRL 708
            A+E  + ++  DV+  + 
Sbjct: 717 TAVEFAYQMQEQDVVPNKF 735



 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 199/719 (27%), Positives = 346/719 (48%), Gaps = 82/719 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           G   +A  + + +   G    + TYI++L AC     +   +K+H+  +    + D  V+
Sbjct: 107 GFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQ 166

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             LLS+Y KCG L  AR+VF  +  R++ +++ M+G Y++    +E + LF  M  +G+ 
Sbjct: 167 NSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGIS 226

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD   +  +L A       + GK +H L ++ G++   RV  +++ + V+CG +  A++ 
Sbjct: 227 PDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQA 286

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------- 261
           F+   ++D V +N++I+   Q G N EA   + +M  + + L   T+             
Sbjct: 287 FKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKAL 346

Query: 262 ----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                                 N LI  Y + G    A E+   M       D+ +W  +
Sbjct: 347 EAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKR----DLISWNAI 402

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I+G+A+     +A+ L+K+M   GV P  VT    +SAC +  A A G  IH   ++ G 
Sbjct: 403 IAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGI 462

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             +  + N+L+NMY +C  L  A+ VF+  + +DV SWNSMIAG+ Q G    AY+LF +
Sbjct: 463 KSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQE 522

Query: 420 MQESDVPPNVITW-----------------------------------NVLISGYIQNGN 444
           MQ  ++ P+ IT+                                   N LI+ YI+ G+
Sbjct: 523 MQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGS 582

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
             +A ++F  +       R+  SW ++I G    G+   A+ +F +MQ+  F P   T  
Sbjct: 583 LQDARNVFHSL-----QHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFS 637

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           S+L  C      ++ K++   +L    E    V N+LI  Y+KSG++  +R +FD M S+
Sbjct: 638 SILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSR 697

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           DI++WN +I GY  +G    A++   QM+   + PN+ +F+S++ A S    ++ GK+V 
Sbjct: 698 DIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVH 757

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
             I +  ++   +   +A+I +Y + G   EA E  +++ IE +   W A++ A   HG
Sbjct: 758 AEIVK-RKLQGDVRVGAALISMYAKCGSQGEAQEVFDNI-IEKNVVTWNAMINAYAQHG 814


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 283/926 (30%), Positives = 474/926 (51%), Gaps = 91/926 (9%)

Query: 21  NPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH 80
           N +  +  L+ L   G+L+EA+ VL S+ +   ++ R TY +LLQ CI   ++    ++H
Sbjct: 68  NTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIH 127

Query: 81  AFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
             +     + D+F+   L+S+YAKCG  + A+++F++M ++++Y+W+ ++G Y + +R+ 
Sbjct: 128 NHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYE 187

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E   L   MVQDG+ PD + F  +L AC +  + + G  + SL++  G      V  +++
Sbjct: 188 EAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALI 247

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +++KCG +  A + F ++  +D + W SMI+G  +  +  +A  LF  M  E ++   V
Sbjct: 248 NMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKV 307

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF------------------------- 294
            F  L+++ N     +    +  RM+ +G+  +++                         
Sbjct: 308 AFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLV 367

Query: 295 ------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
                 +WT MI+GFAQ+GR  +A   F +M   G+ PN VT  S + AC+   AL  G 
Sbjct: 368 KGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGR 427

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           +IH   +K G+  D  V  +L++MY+KC  L  A  VF+ I  ++V +WN+MI  Y Q  
Sbjct: 428 QIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHE 487

Query: 409 YCGKAYELFIKMQESDVPPNVITW-----------------------------------N 433
               A   F  + +  + P+  T+                                   N
Sbjct: 488 KYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRN 547

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
            L+S ++  G+   A++LF     ND  +R+  SWN++IAG+ Q G+   A   F+ MQ 
Sbjct: 548 ALVSMFVNCGDLMSAMNLF-----NDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQE 602

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
           S   P+ +T   +L ACA   A  + + +H  +   +L+  + V   LI  Y K G+I  
Sbjct: 603 SGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDD 662

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           +  +F  +  K++ +W S+I GY  HG    AL+LF QM+  G+KP+  TF+  + A + 
Sbjct: 663 AHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAH 722

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           AG++  G   F S+ + + I P +EHY  M+DL+GR+G L EA+EFI  M ++PDS +W 
Sbjct: 723 AGLIKEGLHHFESMKD-FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWG 781

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
           ALL AC++H +++LA    ++  +L+P D  +  ++  IYA  G  ++  K+RK+  +  
Sbjct: 782 ALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRG 841

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPENVTARSSHS 783
                GQ WIEV   V+ F +   +    + +++ L            VP+  T    H 
Sbjct: 842 VVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPD--TRYVLHD 899

Query: 784 GLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMH 842
              +E+ EKE     HSE+LA+A+ L+ +   P T I I KN+R+C  CH   K +S + 
Sbjct: 900 ---VEDSEKEHALCHHSERLAIAYGLLKT--PPLTPIVISKNLRVCGDCHTATKLISKIT 954

Query: 843 HCEIFLADSKCLHHFKNGQCSCGDYW 868
             +I   DS   HHFK+G CSCGD+W
Sbjct: 955 KRQIIARDSNRFHHFKDGVCSCGDFW 980


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 302/936 (32%), Positives = 477/936 (50%), Gaps = 100/936 (10%)

Query: 16  LTKKSNPRFRDTHLDFLCGNGRLNEAITVL-DSIATQGAK--VRRNTYINLLQACIDSNS 72
           L     P  R+     +C  G +NEA   L D  A Q          Y ++L+ C    +
Sbjct: 75  LKPVETPSLRE-----ICKRGSVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKA 129

Query: 73  IHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIG 130
           +   +++HA +     +   VF+ T+L+ +Y KCGCL DA ++F+ M  + ++TW+AMIG
Sbjct: 130 LSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIG 189

Query: 131 AYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSC 190
           AY  +      +EL+  M   G+  D   FP IL+ACG   D   G  +H L IK G   
Sbjct: 190 AYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVS 249

Query: 191 VRRVRNSVLAVYVKCGKLIWARRFFESMDEK-DGVAWNSMISGYFQIGENDEAHRLFDKM 249
           +  V NS++ +Y KC  L  AR+ F+ M EK D V+WNSMIS Y   G++ EA RLF +M
Sbjct: 250 IVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEM 309

Query: 250 CREEIKLGVVTF-----------------------------------NILIRSYNQLGQC 274
            +  +     TF                                   N LI  Y + G+ 
Sbjct: 310 QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKM 369

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
             A  +   M+      D  +W  M+SGF QNG   +AL  + EM   G  P+ V + S 
Sbjct: 370 GEAANIFYNMDDW----DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISI 425

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           I+A         GM+IH+ A+K G   D+ VGNSL++MY+K   ++  + +FD + DKDV
Sbjct: 426 IAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDV 485

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV------------------------- 429
            SW ++IAG+ Q G   +A ELF ++Q   +  +V                         
Sbjct: 486 VSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSY 545

Query: 430 ---------ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
                    +  N ++  Y + GN D A  +F+ +   D V     SW S+I+ Y   G 
Sbjct: 546 IIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVV-----SWTSMISCYVHNGL 600

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS--LESSLPVM 538
            N AL +F  M+ +   P+ ++++S+L A A L A  K KEIHG ++R+   LE SL   
Sbjct: 601 ANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA-- 658

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           ++L+D YA+ G +  SR +F+ + +KD++ W S+I  Y +HG   AA+DLF +M+   + 
Sbjct: 659 STLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIA 718

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           P+   F++++ A S +G+++ G++   S+   YQ+ P  EHY  ++DL GR+  LEEA +
Sbjct: 719 PDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDLLGRANHLEEAYQ 778

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
           F++ M +EP + +W ALL AC+IH N +L  +A ++L +++P +     L+  +YA   +
Sbjct: 779 FVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYAAERR 838

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA 778
            +D  +VR   + +  + + G  WIEV N V+TF+    S   S  +YS L  + E +  
Sbjct: 839 WKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAK 898

Query: 779 RSSHSGLC------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCH 832
              +           +EEEK ++   HSE+LA+A+ ++ + +   ++RI KN+R+C  CH
Sbjct: 899 EGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGA-SLRITKNLRVCGDCH 957

Query: 833 ETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              K +S     E+ + D+   HHFK G CSCGD W
Sbjct: 958 NFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 993



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 262/551 (47%), Gaps = 50/551 (9%)

Query: 6   LTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTY--INL 63
           L   +QL   + +K +    ++ +     NG+  EA+ +   +  Q A +  NTY  +  
Sbjct: 267 LNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEM--QKASLAPNTYTFVAA 324

Query: 64  LQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           LQAC DS+ I     +HA  L     I+VFV   L+++YA+ G + +A  +F +M + + 
Sbjct: 325 LQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDT 384

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            +W++M+  + ++  + E ++ +  M   G  PD      I+ A    G+   G  +H+ 
Sbjct: 385 ISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAY 444

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
            +K G+    +V NS++ +Y K   + +    F+ M +KD V+W ++I+G+ Q G +  A
Sbjct: 445 AMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRA 504

Query: 243 HRLFDKMCREEIKLGV----------------------------------VTFNILIRSY 268
             LF ++  E I L V                                  V  N ++  Y
Sbjct: 505 LELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVY 564

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
            + G  D A  M + +E      DV +WT MIS +  NG  ++AL+LF  M   GV P+ 
Sbjct: 565 GECGNVDYAARMFELIE----FKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDS 620

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
           +++ S +SA   L AL  G EIH   ++ GF  +  + ++L++MY++C  LE +  VF+ 
Sbjct: 621 ISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNF 680

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGK-AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
           I++KD+  W SMI  Y   G CG+ A +LF +M++  + P+ I +  ++     +G  +E
Sbjct: 681 IRNKDLVLWTSMINAYGMHG-CGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNE 739

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
                + M    +++     +  L+     LG+ N+    ++ ++     P      ++L
Sbjct: 740 GRRFLESMKYEYQLEPWPEHYVCLV---DLLGRANHLEEAYQFVKGMEVEPTAEVWCALL 796

Query: 508 PACAYLVASNK 518
            AC   + SNK
Sbjct: 797 GACQ--IHSNK 805


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 290/925 (31%), Positives = 475/925 (51%), Gaps = 83/925 (8%)

Query: 19   KSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARK 78
            K+N     T+ D     G+ + A+ V+  +  QGA+V    Y+ +L+ CI+   +   R+
Sbjct: 104  KANKLHSHTYKDERTITGK-DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGRE 162

Query: 79   LHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR--ERNLYTWSAMIGAYSRD 135
            +H   +   T +D +    L+++Y +CG +++AR+V+  +   ER +++W+AM+  Y + 
Sbjct: 163  VHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQY 222

Query: 136  QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
                E ++L   M Q GL        ++L +C +    E G+ +H   +K  +     V 
Sbjct: 223  GYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVA 282

Query: 196  NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
            N +L +Y KCG +  AR  F+ M+ K  V+W  +I GY   G ++ A  +F KM +E + 
Sbjct: 283  NCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVV 342

Query: 256  LGVVTF-NIL--------------IRSY--NQLGQCDVAM--EMVKRMESLG-------- 288
               +T+ N+L              + S+  N   + D+A+   +VK     G        
Sbjct: 343  PNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQV 402

Query: 289  ----ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
                +  D+  W  MI G A+ G   +A +++ +M   G+MPN +T    ++AC +  AL
Sbjct: 403  FEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTAL 462

Query: 345  AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
              G EIHS  VK GF  D+ V N+LI+MY++C  ++ A  +F+ +  KD+ SW +MI G 
Sbjct: 463  HWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGL 522

Query: 405  CQAGYCGKAYELFIKMQESDVPPNVITW-------------------------------- 432
             ++G   +A  +F  MQ++ + PN +T+                                
Sbjct: 523  AKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDA 582

Query: 433  ---NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
               N L++ Y   G+  +A  +F RM      +R+  ++N++I GY        AL +F 
Sbjct: 583  HVANTLVNMYSMCGSVKDARQVFDRM-----TQRDIVAYNAMIGGYAAHNLGKEALKLFD 637

Query: 490  KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
            ++Q     P+ VT +++L ACA   +    KEIH  VL+    S   + N+L+ TYAK G
Sbjct: 638  RLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCG 697

Query: 550  NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
            +   +  +FD M  +++I+WN++I G   HG     L LF++MK  G+KP+  TF+S++ 
Sbjct: 698  SFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLS 757

Query: 610  AHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDS 669
            A S AG+++ G++ FCS++  + I P IEHY  M+DL GR+G+L+E    I+ MP + ++
Sbjct: 758  ACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKTMPFQANT 817

Query: 670  SIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLE 729
             IW ALL ACRIHGN+ +A  A E    L+P +  +   +  +YA  G  + A K+RKL 
Sbjct: 818  RIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLM 877

Query: 730  RENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP-----ENVTARSSHSG 784
             +       G+ WIEV + ++ FV    S   S+ +Y+ L  +      E     +    
Sbjct: 878  EQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKMEGYVPDTRSVM 937

Query: 785  LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHH 843
              ++E EKE     HSE+LA+A+ LI  S  P T IRI KN+R+C  CH   K+++ +  
Sbjct: 938  HDVDEGEKENAVCHHSERLAIAYGLI--STLPGTPIRIFKNLRVCPDCHTATKFITKIVD 995

Query: 844  CEIFLADSKCLHHFKNGQCSCGDYW 868
             EI   D    HHFK+G CSCGDYW
Sbjct: 996  REIVARDVNRFHHFKDGVCSCGDYW 1020


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 299/917 (32%), Positives = 470/917 (51%), Gaps = 87/917 (9%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVR---RNTYINLLQACIDSNSIHLARKLHAFLNLVTE 88
           LC    L  A+ ++ S +   A +    +     LLQAC +   I   R+LH F++  T 
Sbjct: 15  LCETDNLTTALILIQSHSQNAAFISLQAKEAIGLLLQACGNQKDIETGRRLHKFVSDSTH 74

Query: 89  I--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
              D  + T+L+ +YA CG   D+R VF++M  +NL  W+A++  Y+R+  + +VV++F 
Sbjct: 75  YRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSGYTRNGLYGDVVKVFM 134

Query: 147 LMVQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
            +V D  F PD+F FP +++ACG   D   G+++H +VIK+G+     V N+++ +Y KC
Sbjct: 135 DLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGKC 194

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL-GVVTFNIL 264
           G +  A + F+ M E + V+WNSMI  + + G + ++  L  +M  EE  L  VVT   +
Sbjct: 195 GAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTI 254

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVF------------------------------ 294
           +      G+ D+ M +      LG++ +V                               
Sbjct: 255 LPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNV 314

Query: 295 -TWTCMISGFAQNGRTSQALDLFKEMSFVG--VMPNGVTITSAISACTDLKALAMGMEIH 351
            +W  MIS F+  G  ++A +L +EM   G  +  N VTI + + AC D   L    E+H
Sbjct: 315 VSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELH 374

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
             + +  F   V + N+ I  Y+KC  L +AE+VF  I DK V SWN++I G+ Q G   
Sbjct: 375 GYSFRHCF-QHVELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPR 433

Query: 412 KAYELFIKMQESDVPPNVIT-----------------------------------WNVLI 436
           KA  L  +M  S   P+  T                                      L+
Sbjct: 434 KALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLL 493

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
           S YI  G    A  LF RM       +N  SWN++I+GY Q G    +L +FRK  S   
Sbjct: 494 SHYIHCGKASSARVLFDRMKD-----KNLVSWNAMISGYSQNGLPYESLALFRKSLSEGI 548

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
             + + I+SV  AC+ L A    KE HG VL+        V  S+ID YAKSG I  SR 
Sbjct: 549 QSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRK 608

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           +FDG+  K++ +WN++I  + +HG    A++L+++MK  G  P+R T++ I++A   AG+
Sbjct: 609 VFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGL 668

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           V+ G K F  +     I P +EHY+ +ID+  R+G+L++A+  + +MP E D+ IW +LL
Sbjct: 669 VEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLL 728

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
            +CR  G +++     ++L +LEP       L+  +YA  GK +   +VR++ +E   + 
Sbjct: 729 RSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQK 788

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYS---DLLYSWLQNVPENVTARSSHSGLCIE--EEE 791
             G  WIEV   VY+FV G   +  S    +++  L+     +  + + S +  E  EEE
Sbjct: 789 DAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHEVGEEE 848

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           K +I   HSEKLA++F L+ +++   T+RI KN+R+C  CH  AK +S     EI + D+
Sbjct: 849 KIDILRGHSEKLAISFGLLKTTKGT-TLRIYKNLRICADCHNAAKLISKAVEREIVVRDN 907

Query: 852 KCLHHFKNGQCSCGDYW 868
           K  HHF++G CSC DYW
Sbjct: 908 KRFHHFRDGLCSCCDYW 924


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 285/908 (31%), Positives = 457/908 (50%), Gaps = 87/908 (9%)

Query: 37   RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKT 95
            + NEA+ +   +  +G +  + T+  +L+AC  + ++      H  ++    E DVF+  
Sbjct: 109  QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168

Query: 96   KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
             L+ +Y+K G L  AREVF+ M +R++  W+AMI   S+ +   E V+ F  M   G+ P
Sbjct: 169  GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228

Query: 156  DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
                   +        + E  + +H  V +   S    V N ++ +Y KCG +  ARR F
Sbjct: 229  SSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVF 286

Query: 216  ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-------------------------- 249
            + M ++D V+W +M++GY   G   E   LFDKM                          
Sbjct: 287  DQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLE 346

Query: 250  ---------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
                      ++ I   ++    L+  Y + G+ + A ++   ++      D+  W+ +I
Sbjct: 347  KGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG----RDLVAWSAII 402

Query: 301  SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
            +   Q G   +AL LF+EM    + PN VT+ S + AC DL  L +G  IH   VK    
Sbjct: 403  AALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMD 462

Query: 361  DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
             D+  G +L++MY+KC    AA   F+ +  +D+ +WNS+I GY Q G    A ++F K+
Sbjct: 463  SDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKL 522

Query: 421  QESDVPPNVITW-----------------------------------NVLISGYIQNGNE 445
            + S + P+  T                                    N LI  Y + G+ 
Sbjct: 523  RLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSL 582

Query: 446  DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
              A  LF +        ++  +WN +IA Y Q G    A+  F +M+   F+PN VT +S
Sbjct: 583  PSAEFLFNKT----DFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVS 638

Query: 506  VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
            VLPA AYL A  +    H C+++    S+  V NSLID YAK G + YS  +F+ M  KD
Sbjct: 639  VLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKD 698

Query: 566  IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
             ++WN+++ GY +HG    A+ LF  M+   ++ +  +F+S++ A   AG+V+ G+K+F 
Sbjct: 699  TVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFH 758

Query: 626  SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
            S+++ Y I P +EHY+ M+DL GR+G  +E + FI+ MP+EPD+ +W ALL +CR+H N+
Sbjct: 759  SMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNV 818

Query: 686  DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV 745
             L  +A++ L  LEP +     ++  IYA  G+  DA K R    +   + + G  W+E+
Sbjct: 819  KLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVEL 878

Query: 746  KNLVYTFVTGGWSESYSD---LLYSWLQNVPENVTARSSHSGLC--IEEEEKEEISGIHS 800
            KN V+ F  G  S    +   LL++ L    E +      S +   +EEE+KE     HS
Sbjct: 879  KNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHS 938

Query: 801  EKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNG 860
            E+LA+ FAL+ +     TI+IVKN+R+C  CH T K++S +    I + D+   HHF++G
Sbjct: 939  ERLAITFALLNTPPGS-TIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDG 997

Query: 861  QCSCGDYW 868
             CSC DYW
Sbjct: 998  ICSCNDYW 1005



 Score =  289 bits (739), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 206/733 (28%), Positives = 342/733 (46%), Gaps = 89/733 (12%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYIN------LLQACIDSNSIHLARKLHAFLNL 85
           +C   +L  + T + + A++   +  +TY N      LL +C   N +    ++HA + +
Sbjct: 1   MCIKHQLRRSFTSIATAASEFPSLSSSTYTNYLHYPRLLSSCKHLNPL---LQIHAQIIV 57

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
                    T L+++Y+     D AR VF+     +   W++MI AY+R +++ E +E++
Sbjct: 58  SGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMY 117

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
           + MV+ GL PD + F  +L+AC    + + G   H  + + G+     +   ++ +Y K 
Sbjct: 118 YCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKM 177

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---------------- 249
           G L  AR  F+ M ++D VAWN+MI+G  Q  +  EA   F  M                
Sbjct: 178 GDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLF 237

Query: 250 -----------CRE------EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
                      CR                N LI  Y++ G  DVA  +  +M    +  D
Sbjct: 238 PGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQM----VDQD 293

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
             +W  M++G+A NG   + L+LF +M    V  N V+  SA  A  +   L  G EIH 
Sbjct: 294 DVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHG 353

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
            A++     D+LV   L+ MY+KC E E A+++F  ++ +D+ +W+++IA   Q GY  +
Sbjct: 354 CALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEE 413

Query: 413 AYELFIKMQESDVPPNVITW-----------------------------------NVLIS 437
           A  LF +MQ   + PN +T                                      L+S
Sbjct: 414 ALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVS 473

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
            Y + G    A+  F RM   D V     +WNSLI GY Q+G   NA+ +F K++ S   
Sbjct: 474 MYAKCGFFTAALTTFNRMSSRDIV-----TWNSLINGYAQIGDPYNAIDMFYKLRLSAIN 528

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P+  T++ V+PACA L   ++   IHG +++   ES   V N+LID YAK G++  +  +
Sbjct: 529 PDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFL 588

Query: 558 FDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           F+    +KD +TWN +I  Y+ +G    A+  F QM+     PN  TF+S++ A +    
Sbjct: 589 FNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAA 648

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
              G      I +   +   +   S +ID+Y + G+L+ + +   +M    D+  W A+L
Sbjct: 649 FREGMAFHACIIQMGFLSNTLVGNS-LIDMYAKCGQLDYSEKLFNEMD-HKDTVSWNAML 706

Query: 677 TACRIHGNIDLAV 689
           +   +HG+ D A+
Sbjct: 707 SGYAVHGHGDRAI 719



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 203/479 (42%), Gaps = 44/479 (9%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L   G   EA+++   +  Q  K  R T +++L AC D + + L + +H F +    + D
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSD 464

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +   T L+S+YAKCG    A   F  M  R++ TW+++I  Y++       +++F+ +  
Sbjct: 465 LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRL 524

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
             + PD      ++ AC    D + G  +H L++KLG      V+N+++ +Y KCG L  
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPS 584

Query: 211 ARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------- 261
           A   F   D  KD V WN +I+ Y Q G   EA   F +M  E      VTF        
Sbjct: 585 AEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAA 644

Query: 262 ---------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                                      N LI  Y + GQ D + ++   M+      D  
Sbjct: 645 YLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDH----KDTV 700

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HSL 353
           +W  M+SG+A +G   +A+ LF  M    V  + V+  S +SAC     +  G +I HS+
Sbjct: 701 SWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSM 760

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
           + K     D+     ++++  +     E    +  M  + D   W +++ G C+     K
Sbjct: 761 SDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL-GSCRMHSNVK 819

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
             E+ +       P N   + VL S Y Q+G   +A     +M      K    SW  L
Sbjct: 820 LGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVEL 878


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 301/936 (32%), Positives = 477/936 (50%), Gaps = 100/936 (10%)

Query: 16  LTKKSNPRFRDTHLDFLCGNGRLNEAITVL-DSIATQGAK--VRRNTYINLLQACIDSNS 72
           L     P  R+     +C  G +NEA   L D  A Q          Y ++L+ C    +
Sbjct: 39  LKPVETPSLRE-----ICKRGSVNEAFQSLTDLFANQSPSQFSLDEAYSSVLELCGSKKA 93

Query: 73  IHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIG 130
           +   +++HA +     +   VF+ T+L+ +Y KCGCL DA ++F+ M  + ++TW+AMIG
Sbjct: 94  LSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPHKTIFTWNAMIG 153

Query: 131 AYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSC 190
           AY  +      +EL+  M   G+  D   FP IL+ACG   D   G  +H L IK G   
Sbjct: 154 AYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVS 213

Query: 191 VRRVRNSVLAVYVKCGKLIWARRFFESMDEK-DGVAWNSMISGYFQIGENDEAHRLFDKM 249
           +  V NS++ +Y KC  L  AR+ F+ M EK D V+WNSMIS Y   G++ EA RLF +M
Sbjct: 214 IVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEM 273

Query: 250 CREEIKLGVVTF-----------------------------------NILIRSYNQLGQC 274
            +  +     TF                                   N LI  Y + G+ 
Sbjct: 274 QKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKM 333

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
             A  +   M+      D  +W  M+SGF QNG   +AL  + EM   G  P+ V + S 
Sbjct: 334 GEAANIFYNMDDW----DTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISI 389

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           I+A         GM+IH+ A+K G   D+ VGNSL++MY+K   ++  + +FD + DKDV
Sbjct: 390 IAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDV 449

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV------------------------- 429
            SW ++IAG+ Q G   +A ELF ++Q   +  +V                         
Sbjct: 450 VSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSY 509

Query: 430 ---------ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
                    +  N ++  Y + GN D A  +F+ +   D V     SW S+I+ Y   G 
Sbjct: 510 IIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFKDVV-----SWTSMISCYVHNGL 564

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS--LESSLPVM 538
            N AL +F  M+ +   P+ ++++S+L A A L A  K KEIHG ++R+   LE SL   
Sbjct: 565 ANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLA-- 622

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           ++L+D YA+ G +  SR +F+ + +KD++ W S+I  Y +HG   AA+DLF +M+   + 
Sbjct: 623 STLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAIDLFRRMEDESIA 682

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           P+   F++++ A S +G+++ G++   S+   YQ+ P  EHY+ ++DL GR+  LEEA +
Sbjct: 683 PDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDLLGRANHLEEAYQ 742

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
           F++ M +EP + +W ALL AC+IH N +L  +A ++L +++P +     L+  +Y+   +
Sbjct: 743 FVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMDPENPGNYVLVSNVYSAERR 802

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA 778
            +D   VR   + +  + + G  WIEV N V+TF+    S   S  +YS L  + E +  
Sbjct: 803 WKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFMARDKSHPQSYEIYSKLSQITEKLAK 862

Query: 779 RSSHSGLC------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCH 832
              +           +EEEK ++   HSE+LA+A+ ++ + +   ++RI KN+R+C  CH
Sbjct: 863 EGGYVAQTKFVLHNAKEEEKVQMLYGHSERLAIAYGMLTTPEGA-SLRITKNLRVCGDCH 921

Query: 833 ETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              K +S     E+ + D+   HHFK G CSCGD W
Sbjct: 922 NFCKLISKFFERELVMRDANRFHHFKGGVCSCGDVW 957



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 262/551 (47%), Gaps = 50/551 (9%)

Query: 6   LTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTY--INL 63
           L   +QL   + +K +    ++ +     NG+  EA+ +   +  Q A +  NTY  +  
Sbjct: 231 LNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEM--QKASLAPNTYTFVAA 288

Query: 64  LQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           LQAC DS+ I     +HA  L     I+VFV   L+++YA+ G + +A  +F +M + + 
Sbjct: 289 LQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDT 348

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            +W++M+  + ++  + E ++ +  M   G  PD      I+ A    G+   G  +H+ 
Sbjct: 349 ISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAY 408

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
            +K G+    +V NS++ +Y K   + +    F+ M +KD V+W ++I+G+ Q G +  A
Sbjct: 409 AMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRA 468

Query: 243 HRLFDKMCREEIKLGV----------------------------------VTFNILIRSY 268
             LF ++  E I L V                                  V  N ++  Y
Sbjct: 469 LELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLSDLVLQNGIVDVY 528

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
            + G  D A  M + +E      DV +WT MIS +  NG  ++AL+LF  M   GV P+ 
Sbjct: 529 GECGNVDYAARMFELIE----FKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDS 584

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
           +++ S +SA   L AL  G EIH   ++ GF  +  + ++L++MY++C  LE +  VF+ 
Sbjct: 585 ISLVSILSAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNF 644

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGK-AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
           I++KD+  W SMI  Y   G CG+ A +LF +M++  + P+ I +  ++     +G  +E
Sbjct: 645 IRNKDLVLWTSMINAYGMHG-CGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNE 703

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
                + M    +++     +  L+     LG+ N+    ++ ++     P      ++L
Sbjct: 704 GRRFLESMKYEYQLEPWPEHYACLV---DLLGRANHLEEAYQFVKGMEVEPTAEVWCALL 760

Query: 508 PACAYLVASNK 518
            AC   + SNK
Sbjct: 761 GACQ--IHSNK 769


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 284/908 (31%), Positives = 456/908 (50%), Gaps = 87/908 (9%)

Query: 37   RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKT 95
            + NEA+ +   +  +G +  + T+  +L+AC  + ++      H  ++    E DVF+  
Sbjct: 109  QYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGA 168

Query: 96   KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
             L+ +Y+K G L  AREVF+ M +R++  W+AMI   S+ +   E V+ F  M   G+ P
Sbjct: 169  GLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEP 228

Query: 156  DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
                   +        + E  + +H  V +   S    V N ++ +Y KCG +  ARR F
Sbjct: 229  SSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSSA--VSNGLIDLYSKCGDVDVARRVF 286

Query: 216  ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-------------------------- 249
            + M ++D V+W +M++GY   G   E   LFDKM                          
Sbjct: 287  DQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLE 346

Query: 250  ---------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
                      ++ I   ++    L+  Y + G+ + A ++   ++      D+  W+ +I
Sbjct: 347  KGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQG----RDLVAWSAII 402

Query: 301  SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
            +   Q G   +AL LF+EM    + PN VT+ S + AC DL  L +G  IH   VK    
Sbjct: 403  AALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMD 462

Query: 361  DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
             D+  G +L++MY+KC    AA   F+ +  +D+ +WNS+I GY Q G    A ++F K+
Sbjct: 463  SDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKL 522

Query: 421  QESDVPPNVITW-----------------------------------NVLISGYIQNGNE 445
            + S + P+  T                                    N LI  Y + G+ 
Sbjct: 523  RLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSL 582

Query: 446  DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
              A  LF +        ++  +WN +IA Y Q G    A+  F +M+   F+PN VT +S
Sbjct: 583  PSAEFLFNKT----DFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVS 638

Query: 506  VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
            VLPA AYL A  +    H C+++    S+  V NSLID YAK G + YS  +F+ M  KD
Sbjct: 639  VLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKD 698

Query: 566  IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
             ++WN+++ GY +HG    A+ LF  M+   ++ +  +F+S++ A    G+V+ G+K+F 
Sbjct: 699  TVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFH 758

Query: 626  SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
            S+++ Y I P +EHY+ M+DL GR+G  +E + FI+ MP+EPD+ +W ALL +CR+H N+
Sbjct: 759  SMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNV 818

Query: 686  DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV 745
             L  +A++ L  LEP +     ++  IYA  G+  DA K R    +   + + G  W+E+
Sbjct: 819  KLGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVEL 878

Query: 746  KNLVYTFVTGGWSESYSD---LLYSWLQNVPENVTARSSHSGLC--IEEEEKEEISGIHS 800
            KN V+ F  G  S    +   LL++ L    E +      S +   +EEE+KE     HS
Sbjct: 879  KNKVHAFRVGDKSHPQLESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHS 938

Query: 801  EKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNG 860
            E+LA+ FAL+ +     TI+IVKN+R+C  CH T K++S +    I + D+   HHF++G
Sbjct: 939  ERLAITFALLNTPPGS-TIQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDG 997

Query: 861  QCSCGDYW 868
             CSC DYW
Sbjct: 998  ICSCNDYW 1005



 Score =  288 bits (737), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 206/733 (28%), Positives = 341/733 (46%), Gaps = 89/733 (12%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYIN------LLQACIDSNSIHLARKLHAFLNL 85
           +C   +L  + T + + A++   +  +TY N      LL +C   N +    ++HA + +
Sbjct: 1   MCIKHQLRRSFTSIATXASEFPSLSSSTYTNYLHYPRLLSSCKHLNPL---LQIHAQIIV 57

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
                    T L+++Y+     D AR VF+     +   W++MI AY+R +++ E +E++
Sbjct: 58  SGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMY 117

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
           + MV+ GL PD + F  +L+AC    + + G   H  + + G+     +   ++ +Y K 
Sbjct: 118 YCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKM 177

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---------------- 249
           G L  AR  F+ M ++D VAWN+MI+G  Q  +  EA   F  M                
Sbjct: 178 GDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLF 237

Query: 250 -----------CRE------EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
                      CR                N LI  Y++ G  DVA  +  +M    +  D
Sbjct: 238 PGICKLSNIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQM----VDQD 293

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
             +W  M++G+A NG   + L+LF +M    V  N V+  SA  A  +   L  G EIH 
Sbjct: 294 DVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHG 353

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
            A++     D+LV   L+ MY+KC E E A+++F  ++ +D+ +W+++IA   Q GY  +
Sbjct: 354 CALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEE 413

Query: 413 AYELFIKMQESDVPPNVITW-----------------------------------NVLIS 437
           A  LF +MQ   + PN +T                                      L+S
Sbjct: 414 ALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVS 473

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
            Y + G    A+  F RM   D V     +WNSLI GY Q+G   NA+ +F K++ S   
Sbjct: 474 MYAKCGFFTAALTTFNRMSSRDIV-----TWNSLINGYAQIGDPYNAIDMFYKLRLSAIN 528

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P+  T++ V+PACA L   ++   IHG +++   ES   V N+LID YAK G++  +  +
Sbjct: 529 PDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFL 588

Query: 558 FDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           F+    +KD +TWN +I  Y+ +G    A+  F QM+     PN  TF+S++ A +    
Sbjct: 589 FNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAA 648

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
              G      I +   +   +   S +ID+Y + G+L  + +   +M    D+  W A+L
Sbjct: 649 FREGMAFHACIIQMGFLSNTLVGNS-LIDMYAKCGQLXYSEKLFNEMD-HKDTVSWNAML 706

Query: 677 TACRIHGNIDLAV 689
           +   +HG+ D A+
Sbjct: 707 SGYAVHGHGDRAI 719



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 202/479 (42%), Gaps = 44/479 (9%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L   G   EA+++   +  Q  K  R T +++L AC D + + L + +H F +    + D
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSD 464

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +   T L+S+YAKCG    A   F  M  R++ TW+++I  Y++       +++F+ +  
Sbjct: 465 LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRL 524

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
             + PD      ++ AC    D + G  +H L++KLG      V+N+++ +Y KCG L  
Sbjct: 525 SAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPS 584

Query: 211 ARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------- 261
           A   F   D  KD V WN +I+ Y Q G   EA   F +M  E      VTF        
Sbjct: 585 AEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAA 644

Query: 262 ---------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                                      N LI  Y + GQ   + ++   M+      D  
Sbjct: 645 YLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDH----KDTV 700

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HSL 353
           +W  M+SG+A +G   +A+ LF  M    V  + V+  S +SAC     +  G +I HS+
Sbjct: 701 SWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSM 760

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
           + K     D+     ++++  +     E    +  M  + D   W +++ G C+     K
Sbjct: 761 SDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALL-GSCRMHSNVK 819

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
             E+ +       P N   + VL S Y Q+G   +A     +M      K    SW  L
Sbjct: 820 LGEVALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVEL 878


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 295/930 (31%), Positives = 487/930 (52%), Gaps = 82/930 (8%)

Query: 17  TKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQG----AKVRRNTYINLLQACIDSNS 72
           TK  +P  +  H   LC +G LN+A+ +L S A  G    + + +     LL+AC    +
Sbjct: 50  TKTHSPILQRLH--NLCDSGNLNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKN 107

Query: 73  IHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIG 130
           IH+ RK+HA ++   ++  DV + T+++++Y+ CG   D+R VF+  +E++L+ ++A++ 
Sbjct: 108 IHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLS 167

Query: 131 AYSRDQRWREVVELFF-LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMS 189
            YSR+  +R+ + LF  L+    L PD+F  P + +AC    D E G+ +H+L +K G  
Sbjct: 168 GYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGF 227

Query: 190 CVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
               V N+++A+Y KCG +  A + FE+M  ++ V+WNS++    + G   E   +F ++
Sbjct: 228 SDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRL 287

Query: 250 C---REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT---------------- 290
                E +   V T   +I +   +G+  + M +      LGIT                
Sbjct: 288 LISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKC 347

Query: 291 ---------------PDVFTWTCMISGFAQNGRTSQALDLFKEMSF-VGVMPNGVTITSA 334
                           +V +W  +I G+++ G      +L +EM     V  N VT+ + 
Sbjct: 348 GYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNV 407

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           + AC+    L    EIH  A + GF  D LV N+ +  Y+KC  L+ AERVF  ++ K V
Sbjct: 408 LPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTV 467

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL---------------ISGY 439
            SWN++I  + Q G+ GK+ +LF+ M +S + P+  T   L               I G+
Sbjct: 468 SSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGF 527

Query: 440 -IQNGNE-DEAVD-------------LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
            ++NG E DE +              L  ++  +    ++   WN +I G+ Q      A
Sbjct: 528 MLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEA 587

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           L  FR+M S    P  + +  VL AC+ + A    KE+H   L+  L     V  +LID 
Sbjct: 588 LDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDM 647

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           YAK G +  S+ IFD ++ KD   WN +I GY +HG    A++LF+ M++ G +P+  TF
Sbjct: 648 YAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTF 707

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           L +++A + AG+V  G K    +   Y + P +EHY+ ++D+ GR+G+L EA++ + +MP
Sbjct: 708 LGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMP 767

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
            EPDS IW +LL++CR +G++++     ++L +LEP       L+  +YA  GK ++  K
Sbjct: 768 DEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRK 827

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVT--GGWSESYSDLLYSW--LQNVPENVTARS 780
           VR+  +EN      G  WIE+  +VY F+   G  SES   +  +W  L+     +  + 
Sbjct: 828 VRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSES-KKIQQTWIKLEKKISKIGYKP 886

Query: 781 SHSGLC--IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
             S +   +EEE K +I   HSEKLA++F L+ +++   T+R+ KN+R+CV CH   K V
Sbjct: 887 DTSCVLHELEEEGKIKILKSHSEKLAISFGLLNTAKGT-TLRVCKNLRICVDCHNAIKLV 945

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S +   +I + D+K  HHFKNG C+CGD+W
Sbjct: 946 SKVVKRDIIVRDNKRFHHFKNGLCTCGDFW 975


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 282/887 (31%), Positives = 444/887 (50%), Gaps = 99/887 (11%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-LVTEID 90
           LC  GRL EAI +L  I  +G  V  NTY  +++ C  +      + +H  L+ L  EID
Sbjct: 31  LCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEID 90

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +++   L++ Y+K   +  A +VF  M  R++ TWS+MI AY+ +    +  + F  M  
Sbjct: 91  IYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTD 150

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
             + P+   F  IL+AC N    E G+ +H++V  +GM     V  +++ +Y KCG++  
Sbjct: 151 ANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISV 210

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------- 261
           A   F  M E++ V+W ++I    Q  + +EA  L+++M +  I    VTF         
Sbjct: 211 ACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNT 270

Query: 262 --------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                                     N LI  Y +      A E+  RM       DV +
Sbjct: 271 PEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSK----RDVIS 326

Query: 296 WTCMISGFAQNG-RTSQALD----LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           W+ MI+G+AQ+G +  +++D    L + M   GV PN VT  S + ACT   AL  G +I
Sbjct: 327 WSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQI 386

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H+   K+GF  D  +  ++ NMY+KC  +  AE+VF  + +K                  
Sbjct: 387 HAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANK------------------ 428

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
                            NV+ W   +S YI+ G+   A  +F  M       RN  SWN 
Sbjct: 429 -----------------NVVAWTSFLSMYIKCGDLSSAEKVFSEMPT-----RNVVSWNL 466

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +IAGY Q G       +   M++  F P+ VT++++L AC  L    + K +H   ++  
Sbjct: 467 MIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEAVKLG 526

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           LES   V  SLI  Y+K G +  +RT+FD MS++D + WN+++ GY  HG    A+DLF 
Sbjct: 527 LESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAVDLFK 586

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           +M    + PN  T  ++I A S AG+V  G+++F  + E +++ P  +HY  M+DL GR+
Sbjct: 587 RMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRA 646

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           G+L+EA EFI+ MP EPD S+W ALL AC+ H N+ LA  A   + +LEP    +   + 
Sbjct: 647 GRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVYITLS 706

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ 770
            IYA  G+ +D+ KVR++  +   +   G+  IE+   ++TFV    +    D +++ L 
Sbjct: 707 NIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDAIHAEL- 765

Query: 771 NVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRI 821
              E +T     +G           +++ +KE+    HSEKLA+A+ L+ +      IRI
Sbjct: 766 ---ETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAYGLLKTPSGT-PIRI 821

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +KN+R+C  CH   K++S +   EI   D+   H+F NG CSCGD+W
Sbjct: 822 MKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 269/892 (30%), Positives = 455/892 (51%), Gaps = 86/892 (9%)

Query: 53   AKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAR 111
            +K R   Y  +L+ C     ++  + +H   +      D  +   L++VYAKCG  + A 
Sbjct: 124  SKGRLRQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYAC 183

Query: 112  EVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG 171
            +VF ++ ER++ +W+A+I  +  +      V LF  M ++G+  ++F +   L+AC  C 
Sbjct: 184  KVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCL 243

Query: 172  DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
            D E GK +H+  IK+G      V ++++ +Y KCG+++ A R F  M +++ V+WN++++
Sbjct: 244  DLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLN 303

Query: 232  GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS------------------------ 267
            G+ Q+G+ ++   LF +M   EI     T + +++                         
Sbjct: 304  GFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCEL 363

Query: 268  -----------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 316
                       Y++ G    A+++  R+E     PDV +W+ +I+   Q G++ +A ++F
Sbjct: 364  DEFISCCLVDMYSKCGLAGDALKVFVRIED----PDVVSWSAIITCLDQKGQSREAAEVF 419

Query: 317  KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
            K M   GV+PN  T+ S +SA TDL  L  G  IH+   K GF  D  V N+L+ MY K 
Sbjct: 420  KRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKI 479

Query: 377  EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---- 432
              ++   RVF+   ++D+ SWN++++G+     C     +F +M      PN+ T+    
Sbjct: 480  GSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISIL 539

Query: 433  -------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
                                             L+  Y +N   ++A  +F R+     +
Sbjct: 540  RSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-----I 594

Query: 462  KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
            KR+  +W  ++AGY Q GQ   A+  F +MQ     PN  T+ S L  C+ +   +  ++
Sbjct: 595  KRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQ 654

Query: 522  IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
            +H   ++      + V ++L+D YAK G +  +  +FDG+ S+D ++WN++ICGY  HG 
Sbjct: 655  LHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQ 714

Query: 582  WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
               AL  F+ M   G  P+  TF+ ++ A S  G+++ GKK F S+++ Y I P IEHY+
Sbjct: 715  GGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYA 774

Query: 642  AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
             M+D+ GR+GK  E   FIE+M +  +  IWE +L AC++HGNI+    A  +LF+LEP 
Sbjct: 775  CMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPE 834

Query: 702  DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
                  L+  ++A  G  +D   VR L      +   G  W+EV   V+ F++   S   
Sbjct: 835  IDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPK 894

Query: 762  SDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAP 816
               ++  LQ++ + +     T  + H    + + EK+E+   HSE+LALAFAL+ S+   
Sbjct: 895  IREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALL-STSTR 953

Query: 817  HTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             TIRI KN+R+C  CH+  K +S + + E+ + D  C HHFKNG CSC ++W
Sbjct: 954  KTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 1005



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 150/290 (51%), Gaps = 2/290 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           N   +  + + + +  +G      T+I++L++C   + + L +++HA  +    + + FV
Sbjct: 510 NETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFV 569

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +YAK   L+DA  +F  + +R+L+ W+ ++  Y++D +  + V+ F  M ++G+
Sbjct: 570 GTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGV 629

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P++F     L  C      ++G+ +HS+ IK G S    V ++++ +Y KCG +  A  
Sbjct: 630 KPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEV 689

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ +  +D V+WN++I GY Q G+  +A + F+ M  E      VTF  ++ + + +G 
Sbjct: 690 VFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGL 749

Query: 274 CDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            +   +    +  + GITP +  + CM+    + G+  +     +EM   
Sbjct: 750 IEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLT 799


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 288/888 (32%), Positives = 444/888 (50%), Gaps = 101/888 (11%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-LVTEID 90
           LC  GRL EAI +L  I  +G  V  NTY  +++ C         + +H  L+ L   ID
Sbjct: 53  LCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAID 112

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +++   L++ Y+K G +    +VF  M  R++ TWS+MI AY+ +    +  + F  M  
Sbjct: 113 IYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKD 172

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
             + P+   F  IL+AC N    E  + +H++V   GM     V  +++ +Y KCG++  
Sbjct: 173 ANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISL 232

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------- 261
           A   F+ M E++ V+W ++I    Q  + +EA  L++KM +  I    VTF         
Sbjct: 233 ACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNT 292

Query: 262 --------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                                     N LI  Y +      A E   RM       DV +
Sbjct: 293 PEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSK----RDVIS 348

Query: 296 WTCMISGFAQNG-RTSQALD----LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           W+ MI+G+AQ+G +  ++LD    L + M   GV PN VT  S + AC+   AL  G +I
Sbjct: 349 WSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQI 408

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H+   K+GF  D  +  ++ NMY+KC  +  AE+VF  +++K                  
Sbjct: 409 HAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENK------------------ 450

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
                            NV+ W  L++ YI+ G+   A  +F  M       RN  SWN 
Sbjct: 451 -----------------NVVAWASLLTMYIKCGDLTSAEKVFSEMST-----RNVVSWNL 488

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +IAGY Q G       +   M+   F P+ VTI+S+L AC  L A  + K +H   ++  
Sbjct: 489 MIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLG 548

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           LES   V  SLI  Y+K G +  +RT+FD +S++D + WN+++ GY  HG    A+DLF 
Sbjct: 549 LESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFK 608

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           +M    + PN  TF ++I A   AG+V  G+++F  + E +++ P  +HY  M+DL GR+
Sbjct: 609 RMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRA 668

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           G+L+EA EFI+ MP EPD S+W ALL AC+ H N+ LA  A   +  LEP +  +   + 
Sbjct: 669 GRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLS 728

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ 770
            IYA  G+ +D+ KVRK+  +   +   G+  IE+   ++TFV    +    D +++ L 
Sbjct: 729 NIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFVAEDCAHPEIDSIHAEL- 787

Query: 771 NVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IR 820
              E +T     +G           ++E +KE     HSEKLA+A+ L+ +   P T IR
Sbjct: 788 ---EMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIAYGLLKTP--PGTPIR 842

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           I+KN+R+C  CH   K++S +   EI   D+   H+FKNG CSCGD+W
Sbjct: 843 IMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFKNGTCSCGDFW 890


>gi|7799758|emb|CAA06829.1| DYW7 protein [Arabidopsis thaliana]
          Length = 406

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 231/405 (57%), Positives = 294/405 (72%), Gaps = 2/405 (0%)

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
           A+WN +IAGY Q G+K+ AL +FRKMQ S F PN VTILS+LPACA L+ +  V+EIHGC
Sbjct: 2   ATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGC 61

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
           VLRR+L++   V N+L DTYAKSG+I YSRTIF GM +KDIITWNSLI GYVLHG +  A
Sbjct: 62  VLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPA 121

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           L LF+QMK+ G+ PNRGT  SIILAH L G VD GKKVF SI   Y IIP +EH SAM+ 
Sbjct: 122 LALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVY 181

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           LYGR+ +LEEA++FI++M I+ ++ IWE+ LT CRIHG+ID+A+ A E LF LEP +   
Sbjct: 182 LYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTAT 241

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
           + ++ QIYA+  K   +L+  K  R+N  +   GQ WIEV+NL++TF TG  S+  +D+L
Sbjct: 242 ESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVL 301

Query: 766 YSWLQNVPENVTARSSHSG-LCIEEEEKEEISGIHSEKLALAFALIGSSQAPH-TIRIVK 823
           Y  ++ +         ++G L IEEE +EE  GIHSEK A+AF LI SS A   TIRI+K
Sbjct: 302 YPLVEKMSRLDNRSDQYNGELWIEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRILK 361

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+RMC  CH+TAKYVS  + C+I L D++CLHHFKNG CSC DYW
Sbjct: 362 NLRMCRDCHDTAKYVSKRYGCDILLEDTRCLHHFKNGDCSCKDYW 406



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 104/204 (50%)

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           TW  +I+G+ QNG+  +AL+LF++M F   MPN VTI S + AC +L    M  EIH   
Sbjct: 3   TWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCV 62

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           ++        V N+L + Y+K  ++E +  +F  ++ KD+ +WNS+I GY   G  G A 
Sbjct: 63  LRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPAL 122

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
            LF +M+   + PN  T + +I  +   GN DE   +F  +  +  +       ++++  
Sbjct: 123 ALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYL 182

Query: 475 YQQLGQKNNALGVFRKMQSSCFYP 498
           Y +  +   AL   ++M      P
Sbjct: 183 YGRANRLEEALQFIQEMNIQSETP 206



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 1/204 (0%)

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
           TW+ +I  Y ++ +  E +ELF  M      P+      +L AC N    +  + +H  V
Sbjct: 3   TWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCV 62

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
           ++  +  +  V+N++   Y K G + ++R  F  M+ KD + WNS+I GY   G    A 
Sbjct: 63  LRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPAL 122

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISG 302
            LF++M  + I     T + +I ++  +G  D   ++   + +   I P +   + M+  
Sbjct: 123 ALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYL 182

Query: 303 FAQNGRTSQALDLFKEMSFVGVMP 326
           + +  R  +AL   +EM+     P
Sbjct: 183 YGRANRLEEALQFIQEMNIQSETP 206



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 5/212 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF-- 92
           NG+ +EA+ +   +          T ++LL AC +     + R++H  + L   +D    
Sbjct: 14  NGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCV-LRRNLDAIHA 72

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           VK  L   YAK G ++ +R +F  M  +++ TW+++IG Y     +   + LF  M   G
Sbjct: 73  VKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQG 132

Query: 153 LFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           + P+      I+ A G  G+ + G K+ +S+     +       ++++ +Y +  +L  A
Sbjct: 133 ITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEA 192

Query: 212 RRFFESMD-EKDGVAWNSMISGYFQIGENDEA 242
            +F + M+ + +   W S ++G    G+ D A
Sbjct: 193 LQFIQEMNIQSETPIWESFLTGCRIHGDIDMA 224



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 44/250 (17%)

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW----------------------- 432
           +WN +IAGY Q G   +A ELF KMQ S   PN +T                        
Sbjct: 3   TWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCV 62

Query: 433 ------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
                       N L   Y ++G+ + +  +F  M   D +     +WNSLI GY   G 
Sbjct: 63  LRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDII-----TWNSLIGGYVLHGS 117

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMN 539
              AL +F +M++    PN  T+ S++ A   +   ++ K++   +     +  +L   +
Sbjct: 118 YGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCS 177

Query: 540 SLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           +++  Y ++  +  +      M+   +   W S + G  +HG    A+   + +  F L+
Sbjct: 178 AMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENL--FSLE 235

Query: 599 PNRGTFLSII 608
           P      SI+
Sbjct: 236 PENTATESIV 245



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 41/217 (18%)

Query: 224 VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------------------- 261
             WN +I+GY Q G+ DEA  LF KM         VT                       
Sbjct: 2   ATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGC 61

Query: 262 -------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR 308
                        N L  +Y + G  + +  +   ME    T D+ TW  +I G+  +G 
Sbjct: 62  VLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGME----TKDIITWNSLIGGYVLHGS 117

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVGN 367
              AL LF +M   G+ PN  T++S I A   +  +  G ++ +S+A        +   +
Sbjct: 118 YGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCS 177

Query: 368 SLINMYSKCEELEAA-ERVFDMIKDKDVYSWNSMIAG 403
           +++ +Y +   LE A + + +M    +   W S + G
Sbjct: 178 AMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTG 214


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 274/843 (32%), Positives = 426/843 (50%), Gaps = 77/843 (9%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+ +YAK G +  AR VFE +  R+  +W AM+  Y+R+    E V L+  M   G+ P 
Sbjct: 83  LIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPT 142

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            ++   +L AC     FE G+L+H+ V K G      V N+++A+Y++ G L  A R F 
Sbjct: 143 PYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFS 202

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            M   D V +N++IS + Q G  + A  +F++M         VT   L+ +   +G  + 
Sbjct: 203 EMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNK 262

Query: 277 AMEMVKRMESLGITPD-------------------------------VFTWTCMISGFAQ 305
             ++   +   G++PD                               V  W  M+  + Q
Sbjct: 263 GKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQ 322

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
               +++ DLF +M   GV PN  T    +  CT    + +G +IH L++K GF  D+ V
Sbjct: 323 ISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYV 382

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
              LI+MYSK   L+ A R+ ++++ KDV SW SMIAGY Q  +C +A E F  MQ   +
Sbjct: 383 SGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGI 442

Query: 426 PPN-----------------------------------VITWNVLISGYIQNGNEDEAVD 450
            P+                                   V  WN L++ Y + G   EA  
Sbjct: 443 WPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFS 502

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           LF+ +   DK+     +WN +++G+ Q G    AL VF KM  +    N  T +S + A 
Sbjct: 503 LFEAIEHKDKI-----TWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISAS 557

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
           A L    + K+IH  V++    S   V N+LI  Y K G+I  ++  F  MS ++ ++WN
Sbjct: 558 ANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWN 617

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC 630
           ++I     HG+   ALDLFDQMK  GLKPN  TF+ ++ A S  G+V+ G   F S++  
Sbjct: 618 TIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSE 677

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
           + I P  +HY+ ++D+ GR+G+L+ A +F+E+MP+  ++ +W  LL+ACR+H NI++  L
Sbjct: 678 HGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGEL 737

Query: 691 AIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVY 750
           A + L +LEP D     L+   YA+ GK      VRK+ ++   R   G+ WIEVKN+V+
Sbjct: 738 AAKYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVH 797

Query: 751 TFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCI-----EEEEKEEISGIHSEKLAL 805
            F  G      +  +Y +L ++ + +       G        E+E+K+  + +HSEKLA+
Sbjct: 798 AFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQGNYFLFHEKEKEQKDPTAFVHSEKLAV 857

Query: 806 AFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCG 865
           AF L+ S      +R++KN+R+C  CH   K+ S +   EI L D    HHF NG CSCG
Sbjct: 858 AFGLM-SLPPSMPLRVIKNLRVCNDCHTWMKFTSEVMGREIVLRDVYRFHHFNNGNCSCG 916

Query: 866 DYW 868
           D+W
Sbjct: 917 DFW 919



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 168/616 (27%), Positives = 286/616 (46%), Gaps = 78/616 (12%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFV 93
           NG   EA+ +   +   G         ++L AC  +      R +HA +       +  V
Sbjct: 121 NGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVV 180

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+++Y + G L  A  VF +M   +  T++ +I  +++       +E+F  M   G 
Sbjct: 181 GNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGW 240

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD      +L AC + GD   GK +HS ++K GMS    +  S+L +YVKCG ++ A  
Sbjct: 241 TPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALE 300

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS------ 267
            F+S D  + V WN M+  Y QI +  ++  LF +M    ++    T+  L+R+      
Sbjct: 301 IFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGE 360

Query: 268 -----------------------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
                                        Y++ G  D A  +++ +E+     DV +WT 
Sbjct: 361 INLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEA----KDVVSWTS 416

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           MI+G+ Q+    +AL+ FK+M   G+ P+ + + SAISAC  +KA+  G +IHS     G
Sbjct: 417 MIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSG 476

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
           ++ DV + N+L+N+Y++C   + A  +F+ I+ KD  +WN M++G+ Q+G   +A E+FI
Sbjct: 477 YSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFI 536

Query: 419 KMQESDVPPNVITWNVLISGY-----IQNGNEDEA-----------------VDLFQRMG 456
           KM ++ V  NV T+   IS       I+ G +  A                 + L+ + G
Sbjct: 537 KMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCG 596

Query: 457 KNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
             +  K        RN  SWN++I    Q G    AL +F +M+     PN VT + VL 
Sbjct: 597 SIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLA 656

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSL-PVMNS---LIDTYAKSGNIVYSRTIFDGMS-S 563
           AC+++     V+E  G     S E  + P  +    ++D   ++G +  +R   + M  S
Sbjct: 657 ACSHV---GLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEMPVS 713

Query: 564 KDIITWNSLICGYVLH 579
            + + W +L+    +H
Sbjct: 714 ANAMVWRTLLSACRVH 729



 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 175/616 (28%), Positives = 292/616 (47%), Gaps = 82/616 (13%)

Query: 160 FPKILQAC-GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
           F   L+ C G+   +    ++H+  I  G+   R   N ++ +Y K G +  ARR FE +
Sbjct: 44  FACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQL 103

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CREEIKLGVVTFNIL------------- 264
             +D V+W +M+SGY + G  +EA  L+ +M C   +    V  ++L             
Sbjct: 104 SARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGR 163

Query: 265 ---IRSYNQLGQC------DVAMEMVKRMESLGITPDVF---------TWTCMISGFAQN 306
               + Y Q G C      +  + +  R  SL +   VF         T+  +IS  AQ 
Sbjct: 164 LVHAQVYKQ-GSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQC 222

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           G    AL++F+EM   G  P+ VTI S ++AC  +  L  G ++HS  +K G + D ++ 
Sbjct: 223 GNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIE 282

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
            SL+++Y KC  +  A  +F      +V  WN M+  Y Q     K+++LF +M  + V 
Sbjct: 283 GSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVR 342

Query: 427 PNVITWNVLISG----------------YIQNGNEDEA------VDLFQRMGKNDKVKR- 463
           PN  T+  L+                   I+ G E +       +D++ + G  DK +R 
Sbjct: 343 PNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRI 402

Query: 464 -------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
                  +  SW S+IAGY Q      AL  F+ MQ    +P+ + + S + ACA + A 
Sbjct: 403 LEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAM 462

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
            + ++IH  V      + + + N+L++ YA+ G    + ++F+ +  KD ITWN ++ G+
Sbjct: 463 RQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGF 522

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI--TECYQII 634
              G +  AL++F +M   G+K N  TF+S I A +    +  GK++  ++  T C    
Sbjct: 523 AQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGC---T 579

Query: 635 PMIEHYSAMIDLYGRSGKLEEA-MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
              E  +A+I LYG+ G +E+A M+F E    E +   W  ++T+C  HG     + A++
Sbjct: 580 SETEVANALISLYGKCGSIEDAKMQFFEMS--ERNHVSWNTIITSCSQHG---WGLEALD 634

Query: 694 RLFD------LEPGDV 703
            LFD      L+P DV
Sbjct: 635 -LFDQMKQEGLKPNDV 649



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 74/308 (24%), Positives = 126/308 (40%), Gaps = 47/308 (15%)

Query: 461 VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
            +R  AS N  + G+         L +F     +     C  + SV  ACA       VK
Sbjct: 2   TRRAAASLNKSLTGFLAHEDPEKLLSLF-----AAKVRQCRGLGSVDFACALRECRGSVK 56

Query: 521 E------IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
                  IH   +   L       N LID YAK G +  +R +F+ +S++D ++W +++ 
Sbjct: 57  HWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLS 116

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF--------CS 626
           GY  +G    A+ L+ QM   G+ P      S++ A + A + + G+ V         CS
Sbjct: 117 GYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCS 176

Query: 627 IT--------------------ECYQIIPMIEH--YSAMIDLYGRSGKLEEAMEFIEDMP 664
            T                      +  +P  +   ++ +I  + + G  E A+E  E+M 
Sbjct: 177 ETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMR 236

Query: 665 IE---PDSSIWEALLTACRIHGNIDLAVLAIERLFD--LEPGDVLIQRLILQIYAICGKP 719
           +    PD     +LL AC   G+++        L    + P D +I+  +L +Y  CG  
Sbjct: 237 LSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSP-DYIIEGSLLDLYVKCGVI 295

Query: 720 EDALKVRK 727
            +AL++ K
Sbjct: 296 VEALEIFK 303


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 281/905 (31%), Positives = 458/905 (50%), Gaps = 75/905 (8%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDV 91
           CG  R +    V ++   +  +  R TY+ LLQ C     +  A+++HA  +      D+
Sbjct: 7   CGPDRED----VSNTHQPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDI 62

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           F+   L+++Y KC  + DA +VF++M  R++ +W+++I  Y++    ++  +LF  M   
Sbjct: 63  FLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNA 122

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G  P+   +  IL AC +  + E GK +HS +IK G     RV+NS+L++Y KCG L  A
Sbjct: 123 GFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRA 182

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R+ F  +  +D V++N+M+  Y Q     E   LF +M  E I    VT+  L+ ++   
Sbjct: 183 RQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTP 242

Query: 272 GQCDVAMEMVKRMESLGITPD-------------------------------VFTWTCMI 300
              D    + K     G+  D                               V  +  +I
Sbjct: 243 SMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALI 302

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +  AQ+G   +A + +  M   GV  N  T  S ++AC+  KAL  G  IHS   + G +
Sbjct: 303 AALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHS 362

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            DV +GN+LI+MY++C +L  A  +F  +  +D+ SWN++IAGY +    G+A  L+ +M
Sbjct: 363 SDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQM 422

Query: 421 QESDVPPNVITW---------------------NVLISGYIQNGNEDEAV-DLFQRMGK- 457
           Q   V P  +T+                     ++L SG   NG+   A+ ++++R G  
Sbjct: 423 QSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSL 482

Query: 458 -------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                       R+  SWNS+IAG+ Q G    A  +F++MQ+    P+ +T  SVL  C
Sbjct: 483 MEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGC 542

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
               A    K+IHG +    L+  + + N+LI+ Y + G++  +R +F  +  +D+++W 
Sbjct: 543 KNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWT 602

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRG-TFLSIILAHSLAGMVDLGKKVFCSITE 629
           ++I G    G    A++LF QM++ G +P  G TF SI+ A + AG+V  G ++F S+  
Sbjct: 603 AMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMES 662

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            Y ++P IEHY  ++ L GR+ + +EA   I  MP  PD+++WE LL ACRIHGNI LA 
Sbjct: 663 EYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAE 722

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLV 749
            A      L   +  +  L+  +YA  G+ +D  K+R++      R   G+ WIEV N++
Sbjct: 723 HAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNII 782

Query: 750 YTFVTGGWSESYSDLLYSWLQNVPENVT-----ARSSHSGLCIEEEEKEEISGIHSEKLA 804
           + F+    S   +  +Y+ L+ +   +        + H    + +  +E     HSE+LA
Sbjct: 783 HEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQETSLCTHSERLA 842

Query: 805 LAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCS 863
           +A+ LI +   P T IRI KN+R+C  CH  +K++S +   EI   DS   H FKNG+CS
Sbjct: 843 IAYGLIKTP--PGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFHSFKNGKCS 900

Query: 864 CGDYW 868
           C DYW
Sbjct: 901 CEDYW 905



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 151/520 (29%), Positives = 255/520 (49%), Gaps = 40/520 (7%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LN 84
           +T L        + E + +   ++++G    + TYINLL A    + +   +++H   + 
Sbjct: 198 NTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVE 257

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
                D+ V T L+++  +CG +D A++ F+ + +R++  ++A+I A ++     E  E 
Sbjct: 258 EGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQ 317

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           ++ M  DG+  +   +  IL AC      EAGKL+HS + + G S   ++ N+++++Y +
Sbjct: 318 YYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYAR 377

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--- 261
           CG L  AR  F +M ++D ++WN++I+GY +  +  EA RL+ +M  E +K G VTF   
Sbjct: 378 CGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHL 437

Query: 262 ------------------NIL---IRSYNQLGQCDVAMEMVKR----MESLGI-----TP 291
                             +IL   I+S   L   +  M M +R    ME+  +       
Sbjct: 438 LSACANSSAYADGKMIHEDILRSGIKSNGHLA--NALMNMYRRCGSLMEAQNVFEGTQAR 495

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           DV +W  MI+G AQ+G    A  LF+EM    + P+ +T  S +S C + +AL +G +IH
Sbjct: 496 DVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIH 555

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
               + G   DV +GN+LINMY +C  L+ A  VF  ++ +DV SW +MI G    G   
Sbjct: 556 GRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDM 615

Query: 412 KAYELFIKMQ-ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
           KA ELF +MQ E   PP+  T+  ++S     G   E   +F  M     V      +  
Sbjct: 616 KAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGC 675

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           L+    +  +   A  +  +M    F P+     ++L AC
Sbjct: 676 LVGLLGRARRFQEAETLINQMP---FPPDAAVWETLLGAC 712



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 197/414 (47%), Gaps = 44/414 (10%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-D 90
           L  +G   EA      + + G  + R TY+++L AC  S ++   + +H+ ++      D
Sbjct: 305 LAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSD 364

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           V +   L+S+YA+CG L  ARE+F  M +R+L +W+A+I  Y+R +   E + L+  M  
Sbjct: 365 VQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQS 424

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           +G+ P    F  +L AC N   +  GK++H  +++ G+     + N+++ +Y +CG L+ 
Sbjct: 425 EGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLME 484

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------- 261
           A+  FE    +D ++WNSMI+G+ Q G  + A++LF +M  EE++   +TF         
Sbjct: 485 AQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKN 544

Query: 262 --------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                                     N LI  Y + G    A  +   ++      DV +
Sbjct: 545 PEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR----DVMS 600

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVM-PNGVTITSAISACTDLKALAMGMEI-HSL 353
           WT MI G A  G   +A++LF +M   G   P+G T TS +SAC     +  G +I  S+
Sbjct: 601 WTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSM 660

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAGYCQ 406
             + G    +     L+ +  +    + AE + + +    D   W +++ G C+
Sbjct: 661 ESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLL-GACR 713


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 268/845 (31%), Positives = 436/845 (51%), Gaps = 43/845 (5%)

Query: 30  DFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTE 88
           +F    G L+  + V   +  +G       Y   L+ C     I L  ++H   +    +
Sbjct: 106 EFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFD 165

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
           +DV+++  L++ Y +C  L+ A +VF +M       W+  I    + ++ ++ VELF  M
Sbjct: 166 LDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKM 225

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
               L  +     ++LQACG  G   A K +H  V + G+     + N ++++Y K GKL
Sbjct: 226 QFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKL 285

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             AR                               R+FD M          ++N +I SY
Sbjct: 286 ELAR-------------------------------RVFDSMENRNTS----SWNSMISSY 310

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
             LG  + A  +   +ES  + PD+ TW C++SG   +G   + L++ + M   G  PN 
Sbjct: 311 AALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNS 370

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            ++TS + A ++L  L MG E H   ++ GF  DV VG SLI+MY K   L +A+ VFD 
Sbjct: 371 SSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDN 430

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           +K++++++WNS+++GY   G    A  L  +M++  + P+++TWN +ISGY   G   EA
Sbjct: 431 MKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEA 490

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
           + +  +  K+  +  N  SW +LI+G  Q G   ++L  F +MQ     PN  +I  +L 
Sbjct: 491 LAVLHQT-KSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLR 549

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT 568
           ACA L    K KEIH   +R      + V  +LID Y+KS ++  +  +F  + +K + +
Sbjct: 550 ACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLAS 609

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT 628
           WN +I G+ + G    A+ +F++M+  G+ P+  TF +++ A   +G++  G K F S+ 
Sbjct: 610 WNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMI 669

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
             Y+I+P +EHY  M+DL GR+G L+EA + I  MP++PD++IW ALL +CRIH N+  A
Sbjct: 670 TDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFA 729

Query: 689 VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL 748
             A + LF LEP +     L++ +Y+I  + ED   +R+L      RN     WI++   
Sbjct: 730 ETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQR 789

Query: 749 VYTFVTGGWSESYSDLLYSWL-QNVPENVTARSSHSGLCI----EEEEKEEISGIHSEKL 803
           V+ F +       +  +Y  L Q V E           C+    +E EK++I   H+EKL
Sbjct: 790 VHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKL 849

Query: 804 ALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCS 863
           A+ + LI   +A   IR++KN R+C  CH  AKY+S++   E+FL D    HHF+ G+CS
Sbjct: 850 AITYGLI-KMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCS 908

Query: 864 CGDYW 868
           C D+W
Sbjct: 909 CNDFW 913


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 263/815 (32%), Positives = 413/815 (50%), Gaps = 117/815 (14%)

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           + K+ +      C +  +    D+R  N   W   I  Y ++  W + + L++ M + G+
Sbjct: 58  RNKVKTTREVSACANQTQFTQTDIRN-NAVVWKETIIGYVKNGFWNKALRLYYQMQRTGI 116

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD  +F  +++ACG+  D +AG+ +H  +I                          AR 
Sbjct: 117 NPDKLVFLSVIKACGSQSDLQAGRKVHEDII--------------------------ARG 150

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
           F     E D +   ++ S Y + G  + A ++FD+M +                      
Sbjct: 151 F-----ESDVIVGTALASMYTKCGSLENARQVFDRMPKR--------------------- 184

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
                             DV +W  +I+G++QNG+  +AL LF EM   G+ PN  T+ S
Sbjct: 185 ------------------DVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVS 226

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            +  C  L AL  G +IH  A++ G   DVLV N L+NMY+KC  +  A ++F+ +  +D
Sbjct: 227 VMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRD 286

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------------------- 432
           V SWN++I GY       +A   F +MQ   + PN IT                      
Sbjct: 287 VASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHG 346

Query: 433 --------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
                         N L++ Y + GN + A  LF+RM K     +N  +WN++I+GY Q 
Sbjct: 347 YAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPK-----KNVVAWNAIISGYSQH 401

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           G  + AL +F +MQ+    P+   I+SVLPACA+ +A  + K+IHG  +R   ES++ V 
Sbjct: 402 GHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVG 461

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
             L+D YAK GN+  ++ +F+ M  +D+++W ++I  Y +HG    AL LF +M+  G K
Sbjct: 462 TGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTK 521

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
            +   F +I+ A S AG+VD G + F  +   Y + P +EHY+ ++DL GR+G L+EA  
Sbjct: 522 LDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANG 581

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
            I++M +EPD+++W ALL ACRIH NI+L   A + LF+L+P +     L+  IYA   +
Sbjct: 582 IIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQR 641

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-- 776
            ED  K+RK+ +E   +   G   + V   V TF+ G  +   S+ +Y+ L+ + E +  
Sbjct: 642 WEDVAKLRKMMKEKGVKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRK 701

Query: 777 TARSSHSGLC---IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHE 833
                ++ L    +EEE KE I   HSEKLA++F +I +S     IRI+KN+R+C  CH 
Sbjct: 702 AGYVPNTNLALQDVEEEAKENILSSHSEKLAISFGIINTSPGI-PIRIMKNLRVCSDCHN 760

Query: 834 TAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             K++S +   EI + D+   HH KNG CSCGDYW
Sbjct: 761 ATKFISKIVGREIIVRDANRFHHVKNGFCSCGDYW 795



 Score =  236 bits (601), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 247/512 (48%), Gaps = 43/512 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG  N+A+ +   +   G    +  ++++++AC   + +   RK+H   +    E DV V
Sbjct: 98  NGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIV 157

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L S+Y KCG L++AR+VF+ M +R++ +W+A+I  YS++ +  E + LF  M  +G+
Sbjct: 158 GTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGI 217

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+      ++  C +    E GK +H   I+ G+     V N ++ +Y KCG +  A +
Sbjct: 218 KPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHK 277

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------ 261
            FE M  +D  +WN++I GY    ++ EA   F++M    IK   +T             
Sbjct: 278 LFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFA 337

Query: 262 -----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
                                  N L+  Y + G  + A ++ +RM       +V  W  
Sbjct: 338 LEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPK----KNVVAWNA 393

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           +ISG++Q+G   +AL LF EM   G+ P+   I S + AC    AL  G +IH   ++ G
Sbjct: 394 IISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSG 453

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
           F  +V+VG  L+++Y+KC  +  A+++F+ + ++DV SW +MI  Y   G+   A  LF 
Sbjct: 454 FESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFS 513

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
           KMQE+    + I +  +++     G  D+ +  FQ M  +  +      +  L+    + 
Sbjct: 514 KMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRA 573

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           G  + A G+ + M      P+     ++L AC
Sbjct: 574 GHLDEANGIIKNMS---LEPDANVWGALLGAC 602



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 178/365 (48%), Gaps = 12/365 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N + +EA+   + +  +G K    T +++L AC    ++   +++H + +    E +  V
Sbjct: 300 NSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVV 359

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+++YAKCG ++ A ++FE M ++N+  W+A+I  YS+     E + LF  M   G+
Sbjct: 360 GNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGI 419

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD F    +L AC +    E GK +H   I+ G      V   ++ +Y KCG +  A++
Sbjct: 420 KPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQK 479

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            FE M E+D V+W +MI  Y   G  ++A  LF KM     KL  + F  ++ + +  G 
Sbjct: 480 LFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGL 539

Query: 274 CDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            D  ++  + M+S  G+ P +  + C++    + G   +A  + K MS   + P+     
Sbjct: 540 VDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMS---LEPDANVWG 596

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGF---TDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           + + AC     +   +E+   A K  F    D+      L N+Y++ +  E   ++  M+
Sbjct: 597 ALLGACR----IHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMM 652

Query: 390 KDKDV 394
           K+K V
Sbjct: 653 KEKGV 657


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 290/884 (32%), Positives = 448/884 (50%), Gaps = 71/884 (8%)

Query: 54   KVRRNTYINLLQACIDSN-SIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAR 111
            K    TY  +L+ C   +   H   K+HA  +    E  +FV   L+ +Y K G L+ A+
Sbjct: 166  KPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAK 225

Query: 112  EVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG 171
            +VF+ +++R+  +W AM+   S+     E V LF  M   G++P  ++F  +L AC    
Sbjct: 226  KVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVE 285

Query: 172  DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
             ++ G+ +H LV+K G S    V N+++ +Y + G  I A + F +M ++D V++NS+IS
Sbjct: 286  FYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLIS 345

Query: 232  GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
            G  Q G +D+A  LF KMC + +K   VT   L+ + + +G   V  +        G++ 
Sbjct: 346  GLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSS 405

Query: 292  D-------------------------------VFTWTCMISGFAQNGRTSQALDLFKEMS 320
            D                               V  W  M+  +      +++  +F +M 
Sbjct: 406  DIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQ 465

Query: 321  FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
              G+ PN  T  S +  C+ L+A+ +G +IH+  +K GF  +V V + LI+MY+K  +L+
Sbjct: 466  MEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLD 525

Query: 381  AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-------- 432
             A ++F  +K+KDV SW +MIAGY Q     +A  LF +MQ+  +  + I +        
Sbjct: 526  HALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACA 585

Query: 433  -------------NVLISGYIQNGNEDEA-VDLFQRMGKN-------DKV-KRNTASWNS 470
                            +SGY  + +   A V L+ R GK        DK+  ++  SWNS
Sbjct: 586  GIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNS 645

Query: 471  LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
            LI+G+ Q G    AL +F +M  +    N  T    + A A +      K+IH  +++  
Sbjct: 646  LISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTG 705

Query: 531  LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
             +S   V N LI  YAK GNI  +   F  M  K+ I+WN+++ GY  HG    AL LF+
Sbjct: 706  HDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFE 765

Query: 591  QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
             MK  G+ PN  TF+ ++ A S  G+VD G K F S+ E + ++P  EHY+ ++DL GRS
Sbjct: 766  DMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRS 825

Query: 651  GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
            G L  A  F+E+MPI+PD+ +   LL+AC +H NID+   A   L +LEP D     L+ 
Sbjct: 826  GLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLS 885

Query: 711  QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ 770
             +YA+ GK     + R++ ++   +   G+ WIEV N V+ F  G       D +Y +L+
Sbjct: 886  NMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLR 945

Query: 771  NV----PENVTARSSHSGLC-IEEEEKEEISGIHSEKLALAFALIG-SSQAPHTIRIVKN 824
            ++     EN     ++S L   E  +K     IHSEKLA+AF L+  SS  P  I + KN
Sbjct: 946  DLNELAAENGYIPQTNSLLNDAERRQKGPTQIIHSEKLAIAFGLLSLSSSTP--IHVFKN 1003

Query: 825  IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +R+C  CH   KYVS +    I + DS   HHFK G CSC DYW
Sbjct: 1004 LRVCGDCHNWIKYVSKISDRVIVVRDSYRFHHFKGGICSCKDYW 1047



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 198/717 (27%), Positives = 334/717 (46%), Gaps = 85/717 (11%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLS 99
            I  L  +  +G +    TY+ LL  C+ S       KLH   L +    +V +  +L+ 
Sbjct: 52  GINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMD 111

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +Y   G LD A  VF++M  R L  W+ ++  +   +    V+ LF  M+Q+ + PD+  
Sbjct: 112 LYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERT 171

Query: 160 FPKILQACGNCGD--FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
           +  +L+ CG  GD  F   + +H+  I  G      V N ++ +Y K G L  A++ F+ 
Sbjct: 172 YAGVLRGCGG-GDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDG 230

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---------------------------- 249
           + ++D V+W +M+SG  Q G  +EA  LF +M                            
Sbjct: 231 LQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVG 290

Query: 250 -------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
                   ++   L     N L+  Y++LG    A ++   M    +  D  ++  +ISG
Sbjct: 291 EQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAM----LQRDEVSYNSLISG 346

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
            +Q G + +AL+LFK+M    + P+ VT+ S +SAC+ + AL +G + HS A+K G + D
Sbjct: 347 LSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSD 406

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           +++  +L+++Y KC +++ A   F   + ++V  WN M+  Y       +++++F +MQ 
Sbjct: 407 IILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQM 466

Query: 423 SDVPPNVITW-----------------------------------NVLISGYIQNGNEDE 447
             + PN  T+                                   +VLI  Y + G  D 
Sbjct: 467 EGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDH 526

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           A+ +F+R+ + D V     SW ++IAGY Q  +   AL +F++MQ    + + +   S +
Sbjct: 527 ALKIFRRLKEKDVV-----SWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAI 581

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
            ACA + A N+ ++IH           L V N+L+  YA+ G +  +   FD + SKD I
Sbjct: 582 SACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNI 641

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
           +WNSLI G+   G    AL LF QM   G + N  TF   + A +    V LGK++   I
Sbjct: 642 SWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMI 701

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
            +        E  + +I LY + G +++A     +MP E +   W A+LT    HG+
Sbjct: 702 IKTGH-DSETEVSNVLITLYAKCGNIDDAERQFFEMP-EKNEISWNAMLTGYSQHGH 756



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 163/648 (25%), Positives = 282/648 (43%), Gaps = 88/648 (13%)

Query: 114 FEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF 173
           F+   E N    +A+  AYS D+     +    LM + G+  +   +  +L  C + G F
Sbjct: 29  FQKFLEHN----TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWF 84

Query: 174 EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
             G  +H  ++K+G      +   ++ +Y+  G L  A   F+ M  +    WN ++  +
Sbjct: 85  SDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRF 144

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP-- 291
                      LF +M +E++K    T+  ++R     G  DV    V+++ +  IT   
Sbjct: 145 VAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRG---CGGGDVPFHCVEKIHARTITHGY 201

Query: 292 ---------------------------------DVFTWTCMISGFAQNGRTSQALDLFKE 318
                                            D  +W  M+SG +Q+G   +A+ LF +
Sbjct: 202 ENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQ 261

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   GV P     +S +SACT ++   +G ++H L +K GF+ +  V N+L+ +YS+   
Sbjct: 262 MHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGN 321

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
              AE+VF+ +  +D  S+NS+I+G  Q GY  KA ELF KM    + P+ +T   L+S 
Sbjct: 322 FIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSA 381

Query: 439 YIQNGN----------------------EDEAVDLFQRMGKNDKVK--------RNTASW 468
               G                       E   +DL+ +                 N   W
Sbjct: 382 CSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLW 441

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           N ++  Y  L   N +  +F +MQ     PN  T  S+L  C+ L A +  ++IH  VL+
Sbjct: 442 NVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLK 501

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
              + ++ V + LID YAK G + ++  IF  +  KD+++W ++I GY  H  +  AL+L
Sbjct: 502 TGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNL 561

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS------- 641
           F +M+  G+  +   F S I A +    ++ G+++             +  YS       
Sbjct: 562 FKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQ--------ACVSGYSDDLSVGN 613

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
           A++ LY R GK+ +A  F  D     D+  W +L++     G+ + A+
Sbjct: 614 ALVSLYARCGKVRDAY-FAFDKIFSKDNISWNSLISGFAQSGHCEEAL 660



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 121/510 (23%), Positives = 219/510 (42%), Gaps = 80/510 (15%)

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           T +   ++ +   +  ++    M   GV  N  T    +  C      + G ++H   +K
Sbjct: 37  TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
           MGF  +V++   L+++Y    +L+ A  VFD +  + +  WN ++  +      G+   L
Sbjct: 97  MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGL 156

Query: 417 FIKMQESDVPPNVITW------------------------------------NVLISGYI 440
           F +M +  V P+  T+                                    N LI  Y 
Sbjct: 157 FRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYF 216

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           +NG  + A  +F  + K D V     SW ++++G  Q G +  A+ +F +M +S  YP  
Sbjct: 217 KNGFLNSAKKVFDGLQKRDSV-----SWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTP 271

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
               SVL AC  +      +++HG VL++       V N+L+  Y++ GN + +  +F+ 
Sbjct: 272 YIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNA 331

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           M  +D +++NSLI G    G+   AL+LF +M    LKP+  T  S++ A S  G + +G
Sbjct: 332 MLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVG 391

Query: 621 KK------------------------VFCS-ITECYQIIPMIEH-----YSAMIDLYGRS 650
           K+                        V CS I   ++     E      ++ M+  YG  
Sbjct: 392 KQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLL 451

Query: 651 GKLEEAMEFIEDMP---IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG---DVL 704
             L E+ +    M    IEP+   + ++L  C     +DL      ++  L+ G   +V 
Sbjct: 452 DNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQV--LKTGFQFNVY 509

Query: 705 IQRLILQIYAICGKPEDALKV-RKLERENT 733
           +  +++ +YA  GK + ALK+ R+L+ ++ 
Sbjct: 510 VSSVLIDMYAKLGKLDHALKIFRRLKEKDV 539



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 176/360 (48%), Gaps = 6/360 (1%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKT 95
           +  EA+ +   +  QG       + + + AC    +++  +++HA   +     D+ V  
Sbjct: 554 KFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGN 613

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            L+S+YA+CG + DA   F+ +  ++  +W+++I  +++     E + LF  M + G   
Sbjct: 614 ALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEI 673

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           + F F   + A  N  + + GK +H+++IK G      V N ++ +Y KCG +  A R F
Sbjct: 674 NSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQF 733

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
             M EK+ ++WN+M++GY Q G   +A  LF+ M +  +    VTF  ++ + + +G  D
Sbjct: 734 FEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVD 793

Query: 276 VAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
             ++  + M E  G+ P    + C++    ++G  S+A    +EM    + P+ +   + 
Sbjct: 794 EGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMP---IQPDAMVCRTL 850

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           +SAC   K + +G    S  +++   D       L NMY+   +    +R   M+KD+ V
Sbjct: 851 LSACIVHKNIDIGEFAASHLLELEPKDSATY-VLLSNMYAVTGKWGCRDRTRQMMKDRGV 909



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 8/219 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           +G   EA+++   ++  G ++   T+   + A  +  ++ L +++HA  +    + +  V
Sbjct: 653 SGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEV 712

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+++YAKCG +DDA   F +M E+N  +W+AM+  YS+     + + LF  M Q G+
Sbjct: 713 SNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGV 772

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            P+   F  +L AC + G  + G K   S+    G+         V+ +  + G L  AR
Sbjct: 773 LPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRAR 832

Query: 213 RFFESMD-EKDGVAWNSMISG-----YFQIGENDEAHRL 245
           RF E M  + D +   +++S         IGE   +H L
Sbjct: 833 RFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLL 871


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 280/921 (30%), Positives = 469/921 (50%), Gaps = 77/921 (8%)

Query: 20  SNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNS-IHLARK 78
           SN  F +  +  L      ++ + +   + T+      +T+ ++L+AC    +   +  +
Sbjct: 74  SNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQ 133

Query: 79  LHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 137
           +HA  ++        V   L+ +Y+K G +D A+ VFE +  ++  +W AMI   S++ R
Sbjct: 134 IHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGR 193

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
             E + LF  M +  + P  ++F  +L AC     F+ G+ +H  ++K G+S    V N+
Sbjct: 194 EDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNA 253

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           ++ +Y + G LI A + F  M  +D +++NS+ISG  Q G +D A +LF+KM  + +K  
Sbjct: 254 LVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPD 313

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD------------------------- 292
            VT   L+ +   +G      ++   +  +G++ D                         
Sbjct: 314 CVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFL 373

Query: 293 ------VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
                 V  W  M+  + Q G  S++  +F +M   G+MPN  T  S +  CT L AL +
Sbjct: 374 TTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDL 433

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G +IH+  +K GF  +V V + LI+MY+K  EL+ A  +   ++++DV SW +MIAGY Q
Sbjct: 434 GEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQ 493

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISG-----------------YIQNGNEDEA- 448
                +A +LF +M+   +  + I ++  IS                  YI   +ED + 
Sbjct: 494 HDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSI 553

Query: 449 ----VDLFQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
               V L+ R G+             ++  SWN+LI+G+ Q G    AL VF +M  +  
Sbjct: 554 GNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGV 613

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
             N  T  S + A A      + K+IH  +++   +S     N LI  Y+K G+I  ++ 
Sbjct: 614 EANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKR 673

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
            F  M  K++++WN++I GY  HG+   A+ LF++MK  GL PN  TF+ ++ A S  G+
Sbjct: 674 EFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGL 733

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           V+ G   F S+++ + ++P  EHY  ++DL GR+  L  A EFIE+MPIEPD+ IW  LL
Sbjct: 734 VNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLL 793

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
           +AC +H NI++   A   L +LEP D     L+  +YA+ GK +   + R++ ++   + 
Sbjct: 794 SACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKK 853

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------I 787
             G+ WIEVKN ++ F  G      ++ +Y ++ ++ E    R+   G           +
Sbjct: 854 EPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNE----RAGEIGYVQDRYNLLNDV 909

Query: 788 EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIF 847
           E+E+K+  + IHSEKLA+AF L+ S      IR++KN+R+C  CH   K+VS + +  I 
Sbjct: 910 EQEQKDPTAYIHSEKLAVAFGLL-SLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIV 968

Query: 848 LADSKCLHHFKNGQCSCGDYW 868
           + D+   HHF+ G CSC DYW
Sbjct: 969 VRDAYRFHHFEGGVCSCKDYW 989



 Score =  280 bits (715), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 204/721 (28%), Positives = 342/721 (47%), Gaps = 85/721 (11%)

Query: 51  QGAKVRRNTYINLLQACIDSNSIHLARKLHA--FLNLVTEIDVFVKTKLLSVYAKCGCLD 108
           +G +    TY+ L + C +S S+  A+KLHA  F +     DV + ++L+ +Y   G +D
Sbjct: 4   RGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDV-LGSRLIDIYLAHGEVD 62

Query: 109 DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC- 167
           +A ++F+D+   N+  W+ +I      +   +V+ LF LM+ + + PD+  F  +L+AC 
Sbjct: 63  NAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACS 122

Query: 168 GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
           G    F+  + +H+ +I  G      V N ++ +Y K G +  A+  FE +  KD V+W 
Sbjct: 123 GGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWV 182

Query: 228 SMISGYFQIGENDEAHRLFDKMCR--------------------EEIKLG---------- 257
           +MISG  Q G  DEA  LF +M +                    E  KLG          
Sbjct: 183 AMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKW 242

Query: 258 ---VVTF--NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
                TF  N L+  Y++ G    A ++  +M       D  ++  +ISG AQ G + +A
Sbjct: 243 GLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHR----RDRISYNSLISGLAQRGFSDRA 298

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
           L LF++M    + P+ VT+ S +SAC  + A   G ++HS  +KMG + D+++  SL+++
Sbjct: 299 LQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDL 358

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y KC ++E A   F   + ++V  WN M+  Y Q G   ++Y +F++MQ   + PN  T+
Sbjct: 359 YVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTY 418

Query: 433 -----------------------------------NVLISGYIQNGNEDEAVDLFQRMGK 457
                                              +VLI  Y ++G  D A  + QR+ +
Sbjct: 419 PSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLRE 478

Query: 458 NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASN 517
            D V     SW ++IAGY Q      AL +F++M++     + +   S + ACA + A N
Sbjct: 479 EDVV-----SWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALN 533

Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
           + ++IH           L + N+L+  YA+ G    +   F+ + +KD I+WN+LI G+ 
Sbjct: 534 QGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFA 593

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
             G    AL +F QM   G++ N  TF S + A +    +  GK++   + +        
Sbjct: 594 QSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKT-GYDSET 652

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
           E  + +I LY + G +E+A     +MP E +   W A++T    HG    AV   E +  
Sbjct: 653 EASNVLITLYSKCGSIEDAKREFFEMP-EKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQ 711

Query: 698 L 698
           L
Sbjct: 712 L 712



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/508 (28%), Positives = 242/508 (47%), Gaps = 52/508 (10%)

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
           +  G F  G   +A +L  ++ +       V  + LI  Y   G+ D A+++   + S  
Sbjct: 16  LFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPS-- 73

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA-LAMG 347
              +V  W  +ISG       SQ L LF  M    V P+  T  S + AC+  KA   + 
Sbjct: 74  --SNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVT 131

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
            +IH+  +  GF    LV N LI++YSK   ++ A+ VF+ +  KD  SW +MI+G  Q 
Sbjct: 132 EQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQN 191

Query: 408 GYCGKAYELFIKMQESDVPPN--------------------------VITW--------- 432
           G   +A  LF +M +S V P                           ++ W         
Sbjct: 192 GREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVC 251

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           N L++ Y + GN   A  +F +M + D++     S+NSLI+G  Q G  + AL +F KMQ
Sbjct: 252 NALVTLYSRWGNLIAAEQIFSKMHRRDRI-----SYNSLISGLAQRGFSDRALQLFEKMQ 306

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
             C  P+CVT+ S+L ACA + A  K K++H  V++  + S L +  SL+D Y K  +I 
Sbjct: 307 LDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIE 366

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            +   F    +++++ WN ++  Y   G    +  +F QM+  GL PN+ T+ SI+   +
Sbjct: 367 TAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCT 426

Query: 613 LAGMVDLGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
             G +DLG+++   + +  +Q    +   S +ID+Y + G+L+ A   ++ +  E D   
Sbjct: 427 SLGALDLGEQIHTQVIKSGFQFNVYV--CSVLIDMYAKHGELDTARGILQRLR-EEDVVS 483

Query: 672 WEALLTACRIHGNIDLAVLAIERLFDLE 699
           W A++     H   DL   A++   ++E
Sbjct: 484 WTAMIAGYTQH---DLFAEALKLFQEME 508


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 287/931 (30%), Positives = 461/931 (49%), Gaps = 94/931 (10%)

Query: 12  LHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLD-SIATQGAKVRRNTYINLLQACIDS 70
           LH  L K   P   +  L  +      + A+   D + A Q  + R N +  +L+  I +
Sbjct: 10  LHRSLAKFIVPDNPEKILSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLE--IHA 67

Query: 71  NSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIG 130
            S+   R L A        D  +   L+ +YAK G +  AR+VF+++  R+  +W AM+ 
Sbjct: 68  TSV--VRGLGA--------DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLS 117

Query: 131 AYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSC 190
            Y++    +E   L+  M    + P  ++   +L AC     F  G+++H+ V K     
Sbjct: 118 GYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCS 177

Query: 191 VRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC 250
              V N+++A+Y+  G    A R F  M   D V +N++ISG+ Q G  + A ++FD+M 
Sbjct: 178 ETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQ 237

Query: 251 REEIKLGVVTFNILIRSYNQLGQCDVA-------------------------------ME 279
              ++   VT   L+ +   +G                                    +E
Sbjct: 238 LSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIE 297

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
               + +LG   +V  W  M+  + Q    +++ ++F +M   G+ PN  T    +  CT
Sbjct: 298 TAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCT 357

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
               + +G +IHSL++K GF  D+ V   LI+MYSK   L+ A ++ +M++ +DV SW S
Sbjct: 358 CTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTS 417

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVI----------------------------- 430
           MIAGY Q  +C +A   F +MQ+  V P+ I                             
Sbjct: 418 MIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG 477

Query: 431 ------TWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
                  WN L++ Y + G  +EA  LF+ +   D++     +WN LI+G+ Q      A
Sbjct: 478 YAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEI-----TWNGLISGFGQSRLYEQA 532

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           L VF KM  +    N  T +S + A A L    + K++HG  ++    S   V N+LI  
Sbjct: 533 LMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISL 592

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           Y K G+I  ++ IF  MS ++ ++WN++I     HG    ALDLFDQMK  GLKPN  TF
Sbjct: 593 YGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTF 652

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           + ++ A S  G+V+ G   F S++  Y + P+ +HY+ ++D+ GR+G+L+ A  F+++MP
Sbjct: 653 IGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMP 712

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
           I  ++ IW  LL+AC++H NI++  LA + L +LEP D     L+   YA+ GK  +  +
Sbjct: 713 ITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQ 772

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA---RSS 781
           VRK+ ++   R   G+ WIEVKN V+ F  G      SD +Y +L  + + ++    +  
Sbjct: 773 VRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQE 832

Query: 782 HSGLC--IEEEEKEEISGIHSEKLALAFALIGSSQAPHTI--RIVKNIRMCVHCHETAKY 837
           +  L    E+E+K+  + +HSEKLA+AF L+     P  I  R++KN+R+C  CH   K+
Sbjct: 833 NPNLFHEKEQEQKDPTAFVHSEKLAVAFGLM---TLPPCIPLRVIKNLRVCDDCHSWMKF 889

Query: 838 VSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            S +   EI L D    HHF +G CSCGDYW
Sbjct: 890 TSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920


>gi|110738160|dbj|BAF01011.1| DYW7 protein [Arabidopsis thaliana]
          Length = 328

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 208/328 (63%), Positives = 266/328 (81%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M++DG+ PDDFLFPKILQ C NCGD EAGK++HS+VIKLGMS   RV NS+LAVY KCG+
Sbjct: 1   MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 60

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           L +A +FF  M E+D +AWNS++  Y Q G+++EA  L  +M +E I  G+VT+NILI  
Sbjct: 61  LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 120

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           YNQLG+CD AM+++++ME+ GIT DVFTWT MISG   NG   QALD+F++M   GV+PN
Sbjct: 121 YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPN 180

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            VTI SA+SAC+ LK +  G E+HS+AVKMGF DDVLVGNSL++MYSKC +LE A +VFD
Sbjct: 181 AVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFD 240

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
            +K+KDVY+WNSMI GYCQAGYCGKAYELF +MQ++++ PN+ITWN +ISGYI+NG+E E
Sbjct: 241 SVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGE 300

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           A+DLFQRM K+ KV+RNTA+WN +IAGY
Sbjct: 301 AMDLFQRMEKDGKVQRNTATWNLIIAGY 328



 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 101/289 (34%), Positives = 170/289 (58%), Gaps = 1/289 (0%)

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           GV+P+       +  C +   +  G  IHS+ +K+G +  + V NS++ +Y+KC EL+ A
Sbjct: 5   GVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFA 64

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
            + F  ++++DV +WNS++  YCQ G   +A EL  +M++  + P ++TWN+LI GY Q 
Sbjct: 65  TKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQL 124

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G  D A+DL Q+M +   +  +  +W ++I+G    G +  AL +FRKM  +   PN VT
Sbjct: 125 GKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT 183

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
           I+S + AC+ L   N+  E+H   ++      + V NSL+D Y+K G +  +R +FD + 
Sbjct: 184 IMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK 243

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
           +KD+ TWNS+I GY   G+   A +LF +M+   L+PN  T+ ++I  +
Sbjct: 244 NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGY 292



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 111/212 (52%), Gaps = 5/212 (2%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRE----RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           L+  Y + G  D A ++ + M       +++TW+AMI     +    + +++F  M   G
Sbjct: 117 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 176

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P+       + AC        G  +HS+ +K+G      V NS++ +Y KCGKL  AR
Sbjct: 177 VVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDAR 236

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + F+S+  KD   WNSMI+GY Q G   +A+ LF +M    ++  ++T+N +I  Y + G
Sbjct: 237 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNG 296

Query: 273 QCDVAMEMVKRMESLG-ITPDVFTWTCMISGF 303
               AM++ +RME  G +  +  TW  +I+G+
Sbjct: 297 DEGEAMDLFQRMEKDGKVQRNTATWNLIIAGY 328



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 137/300 (45%), Gaps = 44/300 (14%)

Query: 60  YINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           +  +LQ C +   +   + +H+  + L     + V   +L+VYAKCG LD A + F  MR
Sbjct: 13  FPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR 72

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG-- 176
           ER++  W++++ AY ++ +  E VEL   M ++G+ P    +  ++      G  +A   
Sbjct: 73  ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMD 132

Query: 177 -----------------KLMHSLVIKLGM--SCVRRVRNSVLAVYV-------------K 204
                              M S +I  GM    +   R   LA  V              
Sbjct: 133 LMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACS 192

Query: 205 CGKLIWARRFFESMDEKDG-----VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
           C K+I       S+  K G     +  NS++  Y + G+ ++A ++FD +  ++    V 
Sbjct: 193 CLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKD----VY 248

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           T+N +I  Y Q G C  A E+  RM+   + P++ TW  MISG+ +NG   +A+DLF+ M
Sbjct: 249 TWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRM 308



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 11/242 (4%)

Query: 491 MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGN 550
           M      P+      +L  CA        K IH  V++  + S L V NS++  YAK G 
Sbjct: 1   MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 60

Query: 551 IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA 610
           + ++   F  M  +D+I WNS++  Y  +G    A++L  +M+  G+ P   T+  +I  
Sbjct: 61  LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 120

Query: 611 HSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM---PIEP 667
           ++  G  D    +   + E + I   +  ++AMI     +G   +A++    M    + P
Sbjct: 121 YNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVP 179

Query: 668 DSSIWEALLTACR----IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDAL 723
           ++    + ++AC     I+   ++  +A++  F     DVL+   ++ +Y+ CGK EDA 
Sbjct: 180 NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF---IDDVLVGNSLVDMYSKCGKLEDAR 236

Query: 724 KV 725
           KV
Sbjct: 237 KV 238



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 136/313 (43%), Gaps = 51/313 (16%)

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           N +++ Y + G  D A   F+RM      +R+  +WNS++  Y Q G+   A+ + ++M+
Sbjct: 49  NSILAVYAKCGELDFATKFFRRM-----RERDVIAWNSVLLAYCQNGKHEEAVELVKEME 103

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
                P  VT                                    N LI  Y + G   
Sbjct: 104 KEGISPGLVT-----------------------------------WNILIGGYNQLGKCD 128

Query: 553 YSRTIFDGMSS----KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
            +  +   M +     D+ TW ++I G + +G  + ALD+F +M   G+ PN  T +S +
Sbjct: 129 AAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 188

Query: 609 LAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
            A S   +++ G +V  SI      I  +   ++++D+Y + GKLE+A +  + +    D
Sbjct: 189 SACSCLKVINQGSEVH-SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK-NKD 246

Query: 669 SSIWEALLTACRIHGNIDLAVLAIERLFD--LEPGDVLIQRLILQIYAICGKPEDALKV- 725
              W +++T     G    A     R+ D  L P +++    ++  Y   G   +A+ + 
Sbjct: 247 VYTWNSMITGYCQAGYCGKAYELFTRMQDANLRP-NIITWNTMISGYIKNGDEGEAMDLF 305

Query: 726 RKLEREN-TRRNS 737
           +++E++   +RN+
Sbjct: 306 QRMEKDGKVQRNT 318



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 43/206 (20%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFV 93
           NG   +A+ +   +   G      T ++ + AC     I+   ++H+    +  ID V V
Sbjct: 159 NGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 218

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y+KCG L+DAR+VF+ ++ +++YTW++MI  Y +     +  ELF  M    L
Sbjct: 219 GNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANL 278

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+   +                                   N++++ Y+K G    A  
Sbjct: 279 RPNIITW-----------------------------------NTMISGYIKNGDEGEAMD 303

Query: 214 FFESMDEKDG------VAWNSMISGY 233
            F+ M EKDG        WN +I+GY
Sbjct: 304 LFQRM-EKDGKVQRNTATWNLIIAGY 328


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 272/843 (32%), Positives = 427/843 (50%), Gaps = 77/843 (9%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+ +YAK G +  AR VFE++  R+  +W A++  Y+++    E V L+  M + G+ P 
Sbjct: 83  LIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPT 142

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            ++   IL AC     F+ G+L+H  V K G      V N+++++Y++C     A R F 
Sbjct: 143 PYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFC 202

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            M   D V +N++ISG+ Q G  D A  +FD+M    +    VT   L+ + + +G    
Sbjct: 203 DMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRK 262

Query: 277 AMEMVKRMESLGITPD-------------------------------VFTWTCMISGFAQ 305
             ++   +   G++ D                               V  W  M+  + Q
Sbjct: 263 GKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQ 322

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
               +++ D+F  M   GV PN  T    +  CT    + +G +IHSL +K GF  D+ V
Sbjct: 323 IDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYV 382

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
              LI+MYSK   L+ A+R+ DMI++KDV SW SMIAGY Q  +C +A E F +MQ   +
Sbjct: 383 SGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGI 442

Query: 426 PPN-----------------------------------VITWNVLISGYIQNGNEDEAVD 450
            P+                                   V  WN L+  Y + G   EA  
Sbjct: 443 WPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFS 502

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            F+ +   + +     +WN LI+G+ Q G    AL VF KM  +    N  T +S + A 
Sbjct: 503 SFEAIEHKEGI-----TWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISAS 557

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
           A L    + K+IH  V++    S   + N+LI  Y K G+I  ++  F  M+ ++ ++WN
Sbjct: 558 ANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWN 617

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC 630
           ++I     HG    ALDLFDQMK  GLKP+  TF+ ++ A S  G+V+ G   F S++  
Sbjct: 618 TIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNE 677

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
           + I P  +HY+ ++D+ GR+G+L+ A  F+E+MPI  DS +W  LL+AC++H N+++   
Sbjct: 678 HGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEF 737

Query: 691 AIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVY 750
           A + L +LEP D     L+   YA+ GK     ++RK+ ++   R   G+ WIEVKN+V+
Sbjct: 738 AAKHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVH 797

Query: 751 TFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLAL 805
            F  G      +D +Y++L ++ + +        + H     E+E K+  + +HSEKLA+
Sbjct: 798 AFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQENYHLFHEKEKEGKDPTAFVHSEKLAV 857

Query: 806 AFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCG 865
           AF L+ S  +   +R++KN+R+C  CH   K+ S +   EI L D    HHF NG CSCG
Sbjct: 858 AFGLM-SLPSCMPLRVIKNLRVCNDCHTWMKFTSGVMGREIVLRDVYRFHHFNNGSCSCG 916

Query: 866 DYW 868
           DYW
Sbjct: 917 DYW 919



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 174/597 (29%), Positives = 288/597 (48%), Gaps = 83/597 (13%)

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H+  I  G+S  R + N ++ +Y K G +  ARR FE +  +D V+W +++SGY Q G 
Sbjct: 64  IHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGL 123

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRS---------YNQLGQC--------------- 274
            +EA RL+ +M R     GVV    ++ S           QLG+                
Sbjct: 124 GEEAVRLYREMHRS----GVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETF 179

Query: 275 --DVAMEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVG 323
             +  + +  R  S  +   VF         T+  +ISG AQ G   +AL +F EM   G
Sbjct: 180 VGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSG 239

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           + P+ VTI S ++AC+ +  L  G ++HS  +K G + D ++  SL+++Y K  ++E A 
Sbjct: 240 LSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEAL 299

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI------- 436
           ++FD     +V  WN M+  Y Q     K++++F +M  + V PN  T+  ++       
Sbjct: 300 QIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTG 359

Query: 437 ---------SGYIQNGNEDEA------VDLFQRMGKNDKVKR--------NTASWNSLIA 473
                    S  I+NG + +       +D++ + G  DK +R        +  SW S+IA
Sbjct: 360 EIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIA 419

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
           GY Q      AL  F++MQ+   +P+ + + S + ACA + A ++  +IH  V      +
Sbjct: 420 GYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSA 479

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
            + + N L+  YA+ G    + + F+ +  K+ ITWN LI G+   G +  AL +F +M 
Sbjct: 480 DVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMD 539

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
             G K N  TF+S I A +    +  GK++   + +        E  +A+I LYG+ G +
Sbjct: 540 QAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKT-GYTSETEISNALISLYGKCGSI 598

Query: 654 EEA-MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD------LEPGDV 703
           E+A M+F E M    + S W  ++T C  HG     + A++ LFD      L+P DV
Sbjct: 599 EDAKMDFFE-MTKRNEVS-WNTIITCCSQHGR---GLEALD-LFDQMKQQGLKPSDV 649



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/549 (26%), Positives = 251/549 (45%), Gaps = 78/549 (14%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDV 91
           NG   EA+ +   +   G         ++L AC  +    L R +H  +      +E   
Sbjct: 121 NGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSE--T 178

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV   L+S+Y +C     A  VF DM   +  T++ +I  +++       + +F  M   
Sbjct: 179 FVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLS 238

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           GL PD      +L AC   GD   GK +HS ++K GMS    +  S+L +YVK G +  A
Sbjct: 239 GLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEA 298

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
            + F+S D  + V WN M+  Y QI +  ++  +F +M    ++    T+  ++R+    
Sbjct: 299 LQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHT 358

Query: 272 GQCDVA-------------------------------MEMVKRMESLGITPDVFTWTCMI 300
           G+  +                                ++  +R+  +    DV +WT MI
Sbjct: 359 GEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMI 418

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +G+ Q+    +AL+ FKEM   G+ P+ + + SAISAC  +KA+  G +IH+     G++
Sbjct: 419 AGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYS 478

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            DV + N L+ +Y++C   + A   F+ I+ K+  +WN +I+G+ Q+G   +A ++F+KM
Sbjct: 479 ADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKM 538

Query: 421 QESDVPPNVITW-----------------------------------NVLISGYIQNGN- 444
            ++    NV T+                                   N LIS Y + G+ 
Sbjct: 539 DQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSI 598

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
           ED  +D F+        KRN  SWN++I    Q G+   AL +F +M+     P+ VT +
Sbjct: 599 EDAKMDFFE------MTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFV 652

Query: 505 SVLPACAYL 513
            VL AC+++
Sbjct: 653 GVLTACSHV 661



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 233/485 (48%), Gaps = 36/485 (7%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDV 91
           CG+G  + A+ + D +   G      T  +LL AC     +   ++LH++L      +D 
Sbjct: 222 CGHG--DRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDY 279

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            ++  LL +Y K G +++A ++F+     N+  W+ M+ AY +     +  ++F+ M+  
Sbjct: 280 IMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAA 339

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+ P+ F +P +L+ C + G+   G+ +HSL IK G      V   ++ +Y K G L  A
Sbjct: 340 GVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKA 399

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---------------------- 249
           +R  + ++EKD V+W SMI+GY Q     EA   F +M                      
Sbjct: 400 QRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGI 459

Query: 250 ------CREEIKLGVVTFNILIRSYNQL----GQCDVAMEMVKRMESLGITPDVFTWTCM 299
                  +   ++ V  ++  +  +N L     +C ++ E     E++     + TW  +
Sbjct: 460 KAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGI-TWNGL 518

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           ISGFAQ+G   +AL +F +M   G   N  T  S+ISA  +L  +  G +IH+  +K G+
Sbjct: 519 ISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGY 578

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
           T +  + N+LI++Y KC  +E A+  F  +  ++  SWN++I    Q G   +A +LF +
Sbjct: 579 TSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQ 638

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M++  + P+ +T+  +++     G  +E +  F+ M     +      +  ++    + G
Sbjct: 639 MKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAG 698

Query: 480 QKNNA 484
           Q + A
Sbjct: 699 QLDRA 703



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 193/416 (46%), Gaps = 45/416 (10%)

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL-KALAMGMEIHSLAVKMG 358
           ++GF       + L LF       ++   V    A+ AC    +   +  EIH+ A+  G
Sbjct: 13  LAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPEIHAKAIICG 72

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
            +   ++GN LI++Y+K   +  A RVF+ +  +D  SW ++++GY Q G   +A  L+ 
Sbjct: 73  LSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYR 132

Query: 419 KMQESDVPPN-----------------------------------VITWNVLISGYIQNG 443
           +M  S V P                                        N LIS Y++  
Sbjct: 133 EMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCR 192

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           +   A  +F  M   D V     ++N+LI+G+ Q G  + ALG+F +MQ S   P+ VTI
Sbjct: 193 SFRLADRVFCDMLYCDSV-----TFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTI 247

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
            S+L AC+ +    K K++H  +L+  +     +  SL+D Y KSG+I  +  IFD    
Sbjct: 248 ASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDR 307

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
            +++ WN ++  Y        + D+F +M + G++PN+ T+  ++   +  G + LG+++
Sbjct: 308 TNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQI 367

Query: 624 FC-SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
              +I   +Q    +     +ID+Y + G L++A   + DM  E D   W +++  
Sbjct: 368 HSLTIKNGFQSDMYVS--GVLIDMYSKYGWLDKAQRIL-DMIEEKDVVSWTSMIAG 420



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 100/408 (24%), Positives = 188/408 (46%), Gaps = 50/408 (12%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTK 96
           L ++  +   +   G +  + TY  +L+ C  +  I L  ++H+  +    + D++V   
Sbjct: 326 LAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGV 385

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+ +Y+K G LD A+ + + + E+++ +W++MI  Y + +  +E +E F  M   G++PD
Sbjct: 386 LIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPD 445

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           +      + AC        G  +H+ V   G S    + N ++ +Y +CG    A   FE
Sbjct: 446 NIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFE 505

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------------- 261
           +++ K+G+ WN +ISG+ Q G  +EA ++F KM +   K  V TF               
Sbjct: 506 AIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQ 565

Query: 262 --------------------NILIRSYNQLGQCDVA----MEMVKRMESLGITPDVFTWT 297
                               N LI  Y + G  + A     EM KR E         +W 
Sbjct: 566 GKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNE--------VSWN 617

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM-EIHSLAVK 356
            +I+  +Q+GR  +ALDLF +M   G+ P+ VT    ++AC+ +  +  G+    S++ +
Sbjct: 618 TIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNE 677

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAER-VFDMIKDKDVYSWNSMIAG 403
            G          ++++  +  +L+ A+R V +M    D   W ++++ 
Sbjct: 678 HGIHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSA 725



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 122/308 (39%), Gaps = 55/308 (17%)

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK---- 518
           R  AS+N  +AG+         L +F            V     L AC     S +    
Sbjct: 4   RGAASFNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACR---GSGRRWPL 60

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           V EIH   +   L     + N LID YAK G +  +R +F+ +S +D ++W +++ GY  
Sbjct: 61  VPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQ 120

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK----------------- 621
           +G    A+ L+ +M   G+ P      SI+ A +   +  LG+                 
Sbjct: 121 NGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFV 180

Query: 622 ------------------KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
                             +VFC +  C  +      ++ +I  + + G  + A+   ++M
Sbjct: 181 GNALISLYLRCRSFRLADRVFCDMLYCDSVT-----FNTLISGHAQCGHGDRALGIFDEM 235

Query: 664 P---IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG---DVLIQRLILQIYAICG 717
               + PDS    +LL AC   G  DL        + L+ G   D +++  +L +Y   G
Sbjct: 236 QLSGLSPDSVTIASLLAACSAVG--DLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSG 293

Query: 718 KPEDALKV 725
             E+AL++
Sbjct: 294 DIEEALQI 301


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 287/931 (30%), Positives = 460/931 (49%), Gaps = 94/931 (10%)

Query: 12  LHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLD-SIATQGAKVRRNTYINLLQACIDS 70
           LH  L K   P   +  L  +      + A+   D + A Q  + R N +  +L+  I +
Sbjct: 10  LHRSLAKFIVPDNPEKILSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLE--IHA 67

Query: 71  NSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIG 130
            S+   R L A        D  +   L+ +YAK G +  AR+VF+++  R+  +W AM+ 
Sbjct: 68  TSV--VRGLGA--------DRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLS 117

Query: 131 AYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSC 190
            Y++    +E   L+  M    + P  ++   +L AC     F  G+++H+ V K     
Sbjct: 118 GYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCS 177

Query: 191 VRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC 250
              V N+++A+Y+  G    A R F  M   D V +N++ISG+ Q G  + A ++FD+M 
Sbjct: 178 ETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQ 237

Query: 251 REEIKLGVVTFNILIRSYNQLGQCDVA-------------------------------ME 279
              ++   VT   L+ +   +G                                    +E
Sbjct: 238 LSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIE 297

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
               + +LG   +V  W  M+  + Q    +++ ++F +M   G+ PN  T    +  CT
Sbjct: 298 TAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCT 357

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
               + +G +IHSL++K GF  D+ V   LI+MYSK   L+ A ++ +M++ +DV SW S
Sbjct: 358 CTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTS 417

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVI----------------------------- 430
           MIAGY Q  +C +A   F +MQ+  V P+ I                             
Sbjct: 418 MIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG 477

Query: 431 ------TWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
                  WN L++ Y + G  +EA  LF+ +   D++     +WN LI+G+ Q      A
Sbjct: 478 YAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEI-----TWNGLISGFGQSRLYKQA 532

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           L VF KM  +    N  T +S + A A L    + K++HG  ++    S   V N+LI  
Sbjct: 533 LMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVANALISL 592

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           Y K G+I  ++ IF  MS ++ ++WN++I     HG    ALDLFDQMK  GLKPN  TF
Sbjct: 593 YGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTF 652

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           + ++ A S  G+V+ G   F S++  Y + P+ +HY+ ++D+ GR+G+L+ A  F+++MP
Sbjct: 653 IGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMP 712

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
           I  ++ IW  LL+AC++H NI++  LA + L +LEP D     L+   YA+ GK  +  +
Sbjct: 713 ITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQ 772

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA---RSS 781
           VRK+ ++   R   G+ WIEVKN V+ F  G      SD +Y +L  + + ++    +  
Sbjct: 773 VRKMMKDRGIRKEPGRSWIEVKNAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQE 832

Query: 782 HSGLC--IEEEEKEEISGIHSEKLALAFALIGSSQAPHTI--RIVKNIRMCVHCHETAKY 837
           +  L    E+E+K+  + +HSEKLA+AF L+     P  I  R++KN+R+C  CH   K 
Sbjct: 833 NPNLFHEKEQEQKDPTAFVHSEKLAVAFGLM---TLPPCIPLRVIKNLRVCDDCHSWMKC 889

Query: 838 VSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            S +   EI L D    HHF +G CSCGDYW
Sbjct: 890 TSEVTRREIVLRDVYRFHHFNSGSCSCGDYW 920


>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Vitis vinifera]
          Length = 858

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 264/782 (33%), Positives = 422/782 (53%), Gaps = 47/782 (6%)

Query: 28  HLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT 87
           H+  LC +G L E++ +L  +  +  ++    Y  LLQ C+   ++H  +++HA   ++ 
Sbjct: 50  HISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHA--RILK 107

Query: 88  EIDVF-----VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
             D F     V+TKL+  YAKC   + A  +F  +R RN+++W+A++G   R     + +
Sbjct: 108 NGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDAL 167

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
             F  M ++G+FPD+F+ P +L+ACG+      GK +H  V+K+G      V +S++ +Y
Sbjct: 168 LGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMY 227

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF- 261
            KCG L  AR+ F+SM EK+ V WNSMI GY Q G N EA  +F  M  E I+   VT  
Sbjct: 228 GKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVA 287

Query: 262 ------------------------------NIL----IRSYNQLGQCDVAMEMVKRMESL 287
                                         NIL    I  Y+++G  + A  +  RM   
Sbjct: 288 SFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRM--- 344

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
            +  DV TW  +IS + Q+ +  +AL++   M    +  + VT++S +SA      + +G
Sbjct: 345 -LEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLG 403

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
            E H   ++     DV+V NS+I+MY+KCE ++ A +VFD   ++D+  WN+++A Y Q 
Sbjct: 404 KEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQV 463

Query: 408 GYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTAS 467
           G  G+A +LF +MQ   VPPNVI+WN +I G+++NG  +EA D+F +M ++   + N  +
Sbjct: 464 GLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQM-QSLGFQPNLIT 522

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           W +LI+G  Q G    A+  F+KMQ +   P+  +I SVL AC  + +    + IHG + 
Sbjct: 523 WTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFIT 582

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           R     S+PV  SL+D YAK G+I  ++ +F  MSSK++  +N++I  Y LHG    AL 
Sbjct: 583 RHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALA 642

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           LF  ++  G++P+  TF SI+ A S AG+V+ G  +F  +   + + P++EHY  ++ L 
Sbjct: 643 LFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLL 702

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
            R G L+EA+  I  MP +PD+ I  +LLTACR H  I+L     + LF LEP +     
Sbjct: 703 SRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYV 762

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
            +   YA  G+  +   +R L +    R + G  WI+    +  FV G  S   ++ +Y+
Sbjct: 763 ALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYA 822

Query: 768 WL 769
            L
Sbjct: 823 ML 824



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 95/194 (48%), Gaps = 2/194 (1%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV 86
           T +  L  +G   EAI     +   G +    +  ++L AC D  S+   R +H F+   
Sbjct: 525 TLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRH 584

Query: 87  TE-IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
              + V V T L+ +YAKCG +D+A++VF  M  + L  ++AMI AY+   +  E + LF
Sbjct: 585 EFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALALF 644

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
             + ++G+ PD   F  IL AC + G    G  L   +V K  M+ +      V+++  +
Sbjct: 645 KHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSR 704

Query: 205 CGKLIWARRFFESM 218
           CG L  A R   +M
Sbjct: 705 CGNLDEALRLILTM 718


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 289/926 (31%), Positives = 464/926 (50%), Gaps = 103/926 (11%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL----N 84
           L  LC  G L +A+  L    T  A   R  Y  +L       +    R++HA      +
Sbjct: 33  LKRLCKEGDLRQALRQL----TTRAPPAREHYGWVLDLVAARRAAAEGRQVHAHAVTTGS 88

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
           L  + D F+ TKL+ +Y +CG +DDAR +F  M  R +++W+A++GAY       E + +
Sbjct: 89  LNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAGEAMRV 148

Query: 145 FFLM---VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
           +  M      G  PD      +L+ACG  GD   G  +H L +K+G+     V N+++ +
Sbjct: 149 YGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGM 208

Query: 202 YVKCGKLIWARRFFE--SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---------- 249
           Y KCG L  A R FE    D +D  +WNS++SG  Q G   EA  LF  M          
Sbjct: 209 YAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSY 268

Query: 250 --------CREEIKLGVVTF-------------------NILIRSYNQLGQCDVAMEMVK 282
                   C E   LG+++                    N L+  Y + G+ D A+ +  
Sbjct: 269 TSVAVLQVCAE---LGLLSLGRELHAALLKCGSELNIQCNALLVMYAKYGRVDSALRVFG 325

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
           ++       D  +W  M+S + QN   ++A+D F EM   G  P+   + S  SA   L 
Sbjct: 326 QIAE----KDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLS 381

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
            L  G E H+ A+K     D+ VGN+L++MY KC  +E + +VF+ +  +D  SW +++A
Sbjct: 382 RLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRDHISWTTILA 441

Query: 403 GYCQAGYCGKAYELFIKMQESDVPP----------------------------------N 428
            + Q+    +A E+ +++Q+  +                                    +
Sbjct: 442 CFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNGLLD 501

Query: 429 VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
           +I  N LI  Y + G  D +++LFQR+ K D V     SW S+I      G+ N A+ +F
Sbjct: 502 LILENRLIDIYGECGEFDHSLNLFQRVEKKDIV-----SWTSMINCCTNNGRLNGAVFLF 556

Query: 489 RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
            +MQ +   P+ V ++S+L A A L +  K K++HG ++RR+     PV++SL+D Y+  
Sbjct: 557 TEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGC 616

Query: 549 GNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
           G++ Y+  +F+    KD++ W ++I    +HG    A+DLF +M   GL P+  +FL+++
Sbjct: 617 GSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALL 676

Query: 609 LAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
            A S + +V+ GK     +   Y++ P  EHY+ ++D+ GRSG+ EEA EFI+ MP++P 
Sbjct: 677 YACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPK 736

Query: 669 SSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKL 728
           S++W ALL ACR+H N  LAV+A  +L +LEP +     L+  ++A  GK  +A + R  
Sbjct: 737 SAVWCALLGACRVHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTR 796

Query: 729 ERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-- 786
             E   R +    WIE+ N ++TF +G +    S+ ++  L  + E +     +      
Sbjct: 797 MAERGLRKNPACSWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRF 856

Query: 787 ----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMH 842
                 EEEK ++   HSE++A+AF LI S++    IRI KN+R+C  CHE  K VS + 
Sbjct: 857 VLHDTSEEEKIDMLHKHSERIAIAFGLI-STRPGMPIRIAKNLRVCGDCHEFTKLVSKLF 915

Query: 843 HCEIFLADSKCLHHFKNGQCSCGDYW 868
             +I + D+   HHF  G CSC D+W
Sbjct: 916 ERDIVVRDANRFHHFSGGSCSCEDFW 941


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 294/937 (31%), Positives = 472/937 (50%), Gaps = 96/937 (10%)

Query: 10  QQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACID 69
           Q+LH  L  K  P+   T   F     +  +   +L+ I          +Y  LL  C  
Sbjct: 15  QRLH--LPFKPAPKLIQTVPQF----SQDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCT 68

Query: 70  SNSIHLARKLHAFLNLV-TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAM 128
           + S+    ++HA +       D  ++  L+++Y+KC     AR++ ++  E +L +WSA+
Sbjct: 69  TKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSAL 128

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM 188
           I  Y+++      +  F  M   G+  ++F F  +L+AC    D   GK +H +V+  G 
Sbjct: 129 ISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGF 188

Query: 189 SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
                V N+++ +Y KC + + ++R F+ + E++ V+WN++ S Y QI    EA  LF +
Sbjct: 189 EGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYE 248

Query: 249 MC---------------------REE----------IKLGV----VTFNILIRSYNQLGQ 273
           M                      R+           IKLG      + N L+  Y ++G 
Sbjct: 249 MVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGD 308

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
              A+ + ++++     PD+ +W  +I+G   +    QAL+L  +M   G+ PN  T++S
Sbjct: 309 LADAISVFEKIKQ----PDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSS 364

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
           A+ AC  +    +G ++HS  +KM    D+ V   L++MYSKC+ LE A   F+++ +KD
Sbjct: 365 ALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKD 424

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------------------- 432
           + +WN++I+GY Q     +A  LF++M +  +  N  T                      
Sbjct: 425 LIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHG 484

Query: 433 --------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
                         N LI  Y +  + ++A  +F+     D V     S+ S+I  Y Q 
Sbjct: 485 LSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLV-----SFTSMITAYAQY 539

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           GQ   AL +F +MQ     P+     S+L ACA L A  + K++H  +L+      +   
Sbjct: 540 GQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAG 599

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           NSL++ YAK G+I  +   F  ++ + I++W+++I G   HG    AL LF+QM   G+ 
Sbjct: 600 NSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVS 659

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           PN  T +S++ A + AG+V   K  F S+ E +   PM EHY+ MIDL GR+GK+ EA+E
Sbjct: 660 PNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVE 719

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
            +  MP E ++S+W ALL A RIH +++L   A E LF LEP       L+  IYA  GK
Sbjct: 720 LVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGK 779

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA 778
            E+  +VR+L R++  +   G  WIEVK+ VYTF+ G  S   S  +Y+ L  +  ++  
Sbjct: 780 WENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDEL-SDLMD 838

Query: 779 RSSHSGLC------IEEEEKEEISGIHSEKLALAFALIGSSQ-APHTIRIVKNIRMCVHC 831
           ++ +  +       +E+ EKE +   HSEKLA+AF LI + Q AP  IR+ KN+R+CV C
Sbjct: 839 KAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAVAFGLIATPQGAP--IRVKKNLRVCVDC 896

Query: 832 HETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           H   KY+  +   EI + D    HHFK+G CSCGDYW
Sbjct: 897 HTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGDYW 933


>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
          Length = 1974

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 264/782 (33%), Positives = 424/782 (54%), Gaps = 47/782 (6%)

Query: 28   HLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT 87
            H+  LC +G L E++ +L  +  +  ++    Y  LLQ C+   ++H  +++HA   ++ 
Sbjct: 1145 HISSLCKDGHLQESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHA--RILK 1202

Query: 88   EIDVF-----VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
              D F     V+TKL+  YAKC   + A  +F  +R RN+++W+A++G   R     + +
Sbjct: 1203 NGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDAL 1262

Query: 143  ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
              F  M ++G+FPD+F+ P +L+ACG+      GK +H  V+K+G      V +S++ +Y
Sbjct: 1263 LGFIEMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMY 1322

Query: 203  VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI---KLGVV 259
             KCG L  AR+ F+SM EK+ V WNSMI GY Q G N EA  +F  M  E I   ++ V 
Sbjct: 1323 GKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVA 1382

Query: 260  TF----------------------------NIL----IRSYNQLGQCDVAMEMVKRMESL 287
            +F                            NIL    I  Y+++G  + A  +  RM   
Sbjct: 1383 SFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRM--- 1439

Query: 288  GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
             +  DV TW  +IS + Q+ +  +AL++   M    +  + VT++S +SA      + +G
Sbjct: 1440 -LEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLG 1498

Query: 348  MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
             E H   ++     DV+V NS+I+MY+KCE ++ A +VFD   ++D+  WN+++A Y Q 
Sbjct: 1499 KEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQV 1558

Query: 408  GYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTAS 467
            G  G+A +LF +MQ   VPPNVI+WN +I G+++NG  +EA D+F +M ++   + N  +
Sbjct: 1559 GLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQM-QSLGFQPNLIT 1617

Query: 468  WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
            W +LI+G  Q G    A+  F+KMQ +   P+  +I SVL AC  + +    + IHG + 
Sbjct: 1618 WTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFIT 1677

Query: 528  RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
            R     S+PV  SL+D YAK G+I  ++ +F  MSSK++  +N++I  Y LHG    AL 
Sbjct: 1678 RHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNAMISAYALHGQAVEALA 1737

Query: 588  LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
            LF  ++  G++P+  TF SI+ A S AG+V+ G  +F  +   + + P++EHY  ++ L 
Sbjct: 1738 LFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLL 1797

Query: 648  GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
             R G L+EA+  I  MP +PD+ I  +LLTACR H  I+L     + LF LEP +     
Sbjct: 1798 SRCGNLDEALRLILTMPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYV 1857

Query: 708  LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
             +   YA  G+  +   +R L +    R + G  WI+    +  FV G  S   ++ +Y+
Sbjct: 1858 ALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPGCSWIQTGGKLNVFVAGDGSHPKTEEIYA 1917

Query: 768  WL 769
             L
Sbjct: 1918 ML 1919



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 3/212 (1%)

Query: 9    FQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACI 68
            F Q+ SL   + N     T +  L  +G   EAI     +   G +    +  ++L AC 
Sbjct: 1603 FSQMQSL-GFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACT 1661

Query: 69   DSNSIHLARKLHAFLNLVTE-IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSA 127
            D  S+   R +H F+      + V V T L+ +YAKCG +D+A++VF  M  + L  ++A
Sbjct: 1662 DIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFHMMSSKELPIYNA 1721

Query: 128  MIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKL 186
            MI AY+   +  E + LF  + ++G+ PD   F  IL AC + G    G  L   +V K 
Sbjct: 1722 MISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNEGLNLFADMVSKH 1781

Query: 187  GMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
             M+ +      V+++  +CG L  A R   +M
Sbjct: 1782 NMNPIMEHYGCVVSLLSRCGNLDEALRLILTM 1813


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 273/851 (32%), Positives = 433/851 (50%), Gaps = 79/851 (9%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D  ++  L+++Y+KC     AR++ ++  E ++ +WS+++  Y ++    E + +F  M 
Sbjct: 15  DPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMC 74

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             G+  ++F FP +L+AC    D   G+ +H + +  G      V N+++ +Y KCG L 
Sbjct: 75  LLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLD 134

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            +RR F  + E++ V+WN++ S Y Q     EA  LF +M R  I     + +I++ +  
Sbjct: 135 DSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACA 194

Query: 270 QLGQCDVAMEMVKRMESLGIT-------------------------------PDVFTWTC 298
            L + D+  ++   M  +G+                                PDV +W  
Sbjct: 195 GLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNA 254

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           +I+G   +     AL L  EM   G  PN  T++SA+ AC  +    +G ++HS  +KM 
Sbjct: 255 IIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMD 314

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              D+     L++MYSKCE ++ A R +D +  KD+ +WN++I+GY Q G    A  LF 
Sbjct: 315 AHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFS 374

Query: 419 KMQESDVPPNVITW-----------------------------------NVLISGYIQNG 443
           KM   D+  N  T                                    N L+  Y +  
Sbjct: 375 KMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCN 434

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           + DEA  +F+     D V     ++ S+I  Y Q G    AL ++ +MQ +   P+    
Sbjct: 435 HIDEASKIFEERTWEDLV-----AYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFIC 489

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
            S+L ACA L A  + K++H   ++      +   NSL++ YAK G+I  +   F  + +
Sbjct: 490 SSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPN 549

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           + I++W+++I GY  HG    AL LF+QM   G+ PN  T +S++ A + AG+V+ GK+ 
Sbjct: 550 RGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQY 609

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           F  +   + I P  EHY+ MIDL GRSGKL EA+E +  +P E D  +W ALL A RIH 
Sbjct: 610 FEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHK 669

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
           NI+L   A + LFDLEP       L+  IYA  G  E+  KVRK  +++  +   G  WI
Sbjct: 670 NIELGQKAAKMLFDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWI 729

Query: 744 EVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------IEEEEKEEISG 797
           E+K+ VYTF+ G  S S SD +Y+ L  + + + +++ +S +       +++ EKE++  
Sbjct: 730 EIKDKVYTFIVGDRSHSRSDEIYAKLDQLGD-LLSKAGYSSIVEIDIHNVDKSEKEKLLY 788

Query: 798 IHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF 857
            HSEKLA+AF LI +      IR+ KN+R+CV CH   K+V  +   EI + D    HHF
Sbjct: 789 HHSEKLAVAFGLIATPPGG-PIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHF 847

Query: 858 KNGQCSCGDYW 868
           K+G CSCGDYW
Sbjct: 848 KDGSCSCGDYW 858



 Score =  228 bits (582), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 169/658 (25%), Positives = 312/658 (47%), Gaps = 89/658 (13%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT--EIDVF 92
           NG + EA+ V + +   G K    T+ ++L+AC     +++ RK+H  + +VT  E D F
Sbjct: 60  NGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHG-MAVVTGFESDGF 118

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V   L+ +YAKCG LDD+R +F  + ERN+ +W+A+   Y + +   E V LF  MV+ G
Sbjct: 119 VANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSG 178

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P++F    IL AC    + + G+ +H L++K+G+   +   N+++ +Y K G++  A 
Sbjct: 179 IMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAV 238

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS----- 267
             F+ +   D V+WN++I+G      ND A  L D+M     +  + T +  +++     
Sbjct: 239 AVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMG 298

Query: 268 YNQLG---------------------------QCDVAMEMVKRMESLGITPDVFTWTCMI 300
           + +LG                           +C++ M+  +R        D+  W  +I
Sbjct: 299 FKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEM-MDDARRAYDSMPKKDIIAWNALI 357

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           SG++Q G    A+ LF +M    +  N  T+++ + +   L+A+ +  +IH++++K G  
Sbjct: 358 SGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIY 417

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D  V NSL++ Y KC  ++ A ++F+    +D+ ++ SMI  Y Q G   +A +L+++M
Sbjct: 418 SDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQM 477

Query: 421 QESDVPP-----------------------------------NVITWNVLISGYIQNGNE 445
           Q++D+ P                                   ++   N L++ Y + G+ 
Sbjct: 478 QDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSI 537

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           ++A   F  +       R   SW+++I GY Q G    AL +F +M      PN +T++S
Sbjct: 538 EDADRAFSEI-----PNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNHITLVS 592

Query: 506 VLPACAYLVASNKVKE-IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-S 563
           VL AC +    N+ K+      +   ++ +      +ID   +SG +  +  + + +   
Sbjct: 593 VLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAVELVNSIPFE 652

Query: 564 KDIITWNSLICGYVLHG----FWHAALDLFDQMKSFGLKPNR-GTFLSIILAHSLAGM 616
            D   W +L+    +H        AA  LFD      L+P + GT + +   ++ AGM
Sbjct: 653 ADGFVWGALLGAARIHKNIELGQKAAKMLFD------LEPEKSGTHVLLANIYASAGM 704



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 169/601 (28%), Positives = 288/601 (47%), Gaps = 69/601 (11%)

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H+ +IK G S    +RN ++ +Y KC +  +AR+  +   E D V+W+S++SGY Q G 
Sbjct: 3   LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYN-----QLGQCDVAMEMVKRMESLG----- 288
            +EA  +F++MC   +K    TF  ++++ +      +G+    M +V   ES G     
Sbjct: 63  VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT 122

Query: 289 ---------------------ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
                                +  +V +W  + S + Q+    +A+ LFKEM   G+MPN
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPN 182

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             +I+  ++AC  L+   +G +IH L +KMG   D    N+L++MYSK  E+E A  VF 
Sbjct: 183 EFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQ 242

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGK-AYELFIKMQESDVPPNVITWNVLIS-----GYIQ 441
            I   DV SWN++IAG C    C   A  L  +M+ S   PN+ T +  +      G+ +
Sbjct: 243 DIAHPDVVSWNAIIAG-CVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKE 301

Query: 442 NGNE--------DEAVDLFQRMGKNDKV-----------------KRNTASWNSLIAGYQ 476
            G +        D   DLF  +G  D                   K++  +WN+LI+GY 
Sbjct: 302 LGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYS 361

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           Q G   +A+ +F KM S     N  T+ +VL + A L A    K+IH   ++  + S   
Sbjct: 362 QCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFY 421

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           V+NSL+DTY K  +I  +  IF+  + +D++ + S+I  Y  +G    AL L+ QM+   
Sbjct: 422 VINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDAD 481

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           +KP+     S++ A +     + GK++     + +  +  I   ++++++Y + G +E+A
Sbjct: 482 IKPDPFICSSLLNACANLSAYEQGKQLHVHAIK-FGFMCDIFASNSLVNMYAKCGSIEDA 540

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
                ++P     S W A++     HG+   A+    RLF+    D +    I  +  +C
Sbjct: 541 DRAFSEIPNRGIVS-WSAMIGGYAQHGHGKEAL----RLFNQMLRDGVPPNHITLVSVLC 595

Query: 717 G 717
            
Sbjct: 596 A 596



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 187/389 (48%), Gaps = 52/389 (13%)

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
           ME+H+  +K GF+ D  + N L+ +YSKC     A ++ D   + DV SW+S+++GY Q 
Sbjct: 1   MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60

Query: 408 GYCGKAYELFIKMQESDVPPNVITW----------------------------------- 432
           G+  +A  +F +M    V  N  T+                                   
Sbjct: 61  GFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVA 120

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           N L+  Y + G  D++  LF  +     V+RN  SWN+L + Y Q      A+G+F++M 
Sbjct: 121 NTLVVMYAKCGLLDDSRRLFGGI-----VERNVVSWNALFSCYVQSELCGEAVGLFKEMV 175

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
            S   PN  +I  +L ACA L   +  ++IHG +L+  L+      N+L+D Y+K+G I 
Sbjct: 176 RSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIE 235

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            +  +F  ++  D+++WN++I G VLH     AL L D+MK  G +PN  T  S + A +
Sbjct: 236 GAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACA 295

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYS-----AMIDLYGRSGKLEEAMEFIEDMPIEP 667
             G  +LG+++  S      +I M  H        ++D+Y +   +++A    + MP + 
Sbjct: 296 AMGFKELGRQLHSS------LIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KK 348

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLF 696
           D   W AL++     G+   AV    ++F
Sbjct: 349 DIIAWNALISGYSQCGDHLDAVSLFSKMF 377


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 266/758 (35%), Positives = 405/758 (53%), Gaps = 78/758 (10%)

Query: 155 PDDFL--FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           PD+ +  +  ILQ C    +   G  +H+ ++  G+     + + +L VY + G +  AR
Sbjct: 6   PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDAR 65

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           R F+ M E++  +W +++  Y  +G+ +E  +LF  M  E ++     F  + ++ ++L 
Sbjct: 66  RMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELK 125

Query: 273 QCDVAMEMVKRMESLGIT-------------------------------PDVFTWTCMIS 301
              V  ++   M S+G                                  DVF W  M+S
Sbjct: 126 NYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVS 185

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
           G+   G   +AL++F++M   GV PN +TI SA+SACT+L  L  G EIH   +K+   D
Sbjct: 186 GYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELD 245

Query: 362 -DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D+LVGNSL++ Y+KC  +E A R F MIK  D+ SWN+M+A                  
Sbjct: 246 SDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLA------------------ 287

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV-----KRNTASWNSLIAGY 475
                          ++G+ Q G+   A++ FQRM     V      R+   WNS+I+  
Sbjct: 288 ---------------VTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSIISAC 332

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
            Q G+  NAL + R+M  S    N VT++S LPAC+ L A  + KEIH  ++R  L++  
Sbjct: 333 AQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCN 392

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            ++NSLID Y + G+I  SR IFD M  +D+++WN +I  Y +HGF   A++LF Q ++ 
Sbjct: 393 FILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTM 452

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           GLKPN  TF +++ A S +G+++ G K F  +   Y + P +E Y+ M+DL  R+G+  E
Sbjct: 453 GLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNE 512

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
            +EFIE MP EP++++W +LL ACRIH N DLA  A   LF+LEP       L+  IY+ 
Sbjct: 513 TLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSA 572

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS----ESYSDLLYSWLQN 771
            G+ EDA K+R L +E       G  WIEVK  +++FV G  S    E  S  + S   +
Sbjct: 573 AGRWEDAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVGDTSHPLMEQISAKMESLYFD 632

Query: 772 VPENVTARSSHSGLC-IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
           + E      ++  L  ++E+EKE     HSEK+ALAF LI S+ A   +RI+KN+R+C  
Sbjct: 633 IKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIALAFGLI-STTAGTPLRIIKNLRVCGD 691

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   K++S +   +I + D+   HHF +G CSCGDYW
Sbjct: 692 CHSATKFISKVEKRDIIMRDNYRFHHFVDGVCSCGDYW 729



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 156/528 (29%), Positives = 256/528 (48%), Gaps = 81/528 (15%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNLVTEIDV--FVKTKLLSVYAKCGCLDDAREVFEDM 117
           Y ++LQ C    ++ L  ++HA L +V  +DV  F+ ++LL VY + GC++DAR +F+ M
Sbjct: 13  YASILQKCRKLYNLRLGFQVHAQL-VVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKM 71

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            ERN+++W+A++  Y     + E ++LF+LMV +G+ PD F+FPK+ +AC    ++  GK
Sbjct: 72  SERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGK 131

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            ++  ++ +G      V+ S+L +++KCG++  ARRFFE ++ KD   WN M+SGY   G
Sbjct: 132 DVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKG 191

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL----------GQC--------DV--- 276
           E  +A  +F KM  E +K   +T    + +   L          G C        D+   
Sbjct: 192 EFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVG 251

Query: 277 -----------AMEMVKRMESLGITPDVFTWTCM--ISGFAQ------------------ 305
                      ++E+ +R   +    D+ +W  M  ++GF Q                  
Sbjct: 252 NSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIAC 311

Query: 306 -----------------------NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
                                  +GR+  ALDL +EM+   V  N VT+ SA+ AC+ L 
Sbjct: 312 SVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLA 371

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           AL  G EIH   ++ G      + NSLI+MY +C  ++ + R+FD++  +D+ SWN MI+
Sbjct: 372 ALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMIS 431

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
            Y   G+   A  LF + +   + PN IT+  L+S    +G  +E    F+ M     + 
Sbjct: 432 VYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMD 491

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                +  ++    + GQ N  L    KM    F PN     S+L AC
Sbjct: 492 PAVEQYACMVDLLSRAGQFNETLEFIEKMP---FEPNAAVWGSLLGAC 536



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/408 (22%), Positives = 172/408 (42%), Gaps = 56/408 (13%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VFV 93
           G   +A+ V   +  +G K    T  + + AC + + +   R++H +   V E+D  + V
Sbjct: 191 GEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLV 250

Query: 94  KTKLLSVYAKCGCLDDARE----------------------------------------- 112
              L+  YAKC  ++ AR                                          
Sbjct: 251 GNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIA 310

Query: 113 --VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
             VF ++  R++  W+++I A ++  R    ++L   M    +  +       L AC   
Sbjct: 311 CSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKL 370

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
                GK +H  +I+ G+     + NS++ +Y +CG +  +RR F+ M ++D V+WN MI
Sbjct: 371 AALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMI 430

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGI 289
           S Y   G   +A  LF +     +K   +TF  L+ + +  G  +   +  K M++   +
Sbjct: 431 SVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAM 490

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            P V  + CM+   ++ G+ ++ L+  ++M F    PN     S + AC     +    +
Sbjct: 491 DPAVEQYACMVDLLSRAGQFNETLEFIEKMPF---EPNAAVWGSLLGACR----IHCNPD 543

Query: 350 IHSLAVKMGFT-DDVLVGNSLI--NMYSKCEELEAAERVFDMIKDKDV 394
           +   A +  F  +    GN ++  N+YS     E A ++  ++K++ V
Sbjct: 544 LAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGV 591


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 277/886 (31%), Positives = 466/886 (52%), Gaps = 88/886 (9%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           LLQAC     I + R+LH  ++  T+   D  + T+++++Y+ CG   D+R VF+ +R +
Sbjct: 4   LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF-PDDFLFPKILQACGNCGDFEAGKLM 179
           NL+ W+A++ AY+R++ + + + +F  ++      PD+F  P +++AC    D   G+++
Sbjct: 64  NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 123

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H +  K+ +     V N+++A+Y KCG +  A + FE M E++ V+WNS+I G+ + G  
Sbjct: 124 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFL 183

Query: 240 DEAHRLFDKM--------------------CREE-------------IKLGV----VTFN 262
            E+   F +M                    C  E             +KLG+    +  N
Sbjct: 184 QESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNN 243

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF- 321
            LI  Y++      A  +  + +      ++ +W  MI G+A+     +   L ++M   
Sbjct: 244 SLIDMYSKCRFLSEAQLLFDKNDK----KNIVSWNSMIGGYAREEDVCRTFYLLQKMQTE 299

Query: 322 -VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
              +  +  TI + +  C +   L    E+H  + + G   + LV N+ I  Y++C  L 
Sbjct: 300 DAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALC 359

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL----- 435
           ++ERVFD++  K V SWN+++ GY Q     KA +L+++M +S + P+  T   L     
Sbjct: 360 SSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACS 419

Query: 436 ----------ISGY-IQNGNEDEAVDLFQRM---------GK--------NDKVKRNTAS 467
                     I G+ ++NG    AVD F  +         GK        +    R+  S
Sbjct: 420 RMKSLHYGEEIHGFALRNG---LAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVS 476

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           WN +IAGY Q G  + A+ +FR+M S    P  + I+ V  AC+ L A    KE+H   L
Sbjct: 477 WNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFAL 536

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           +  L   + V +S+ID YAK G I  S+ IFD +  KD+ +WN +I GY +HG    AL+
Sbjct: 537 KAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALE 596

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           LF++M   GLKP+  TF  I++A S AG+V+ G + F  +   + I P +EHY+ ++D+ 
Sbjct: 597 LFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDML 656

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           GR+G++++A+  IE+MP +PDS IW +LL++CRIHGN+ L      +L +LEP       
Sbjct: 657 GRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYV 716

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG-WSESYSDLLY 766
           LI  ++A  GK +D  +VR   ++   +   G  WIEV   V+ F+ G        ++  
Sbjct: 717 LISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRE 776

Query: 767 SWLQ-NVPENVTARSSHSGLCIEEEEKEEISGI---HSEKLALAFALIGSSQAPHTIRIV 822
           +W +  V  +    +  +G  + + E+E+  GI   HSEKLA++F L+ +++    +R+ 
Sbjct: 777 TWRRLEVKISSIGYTPDTGSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGL-PVRVY 835

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN+R+C  CH  AK++S + + +I + D+K  HHF++G CSCGDYW
Sbjct: 836 KNLRICGDCHNAAKFISKVVNRDIVVRDNKRFHHFRDGICSCGDYW 881



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/463 (23%), Positives = 217/463 (46%), Gaps = 41/463 (8%)

Query: 44  VLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSV 100
           +L  + T+ AK++ +  T +N+L  C++ + +   ++LH +      + +  V    ++ 
Sbjct: 292 LLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAA 351

Query: 101 YAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLF 160
           Y +CG L  +  VF+ M  + + +W+A++  Y+++   R+ ++L+  M   GL PD F  
Sbjct: 352 YTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTI 411

Query: 161 PKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE 220
             +L AC        G+ +H   ++ G++    +  S+L++Y+ CGK   A+  F+ M+ 
Sbjct: 412 GSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEH 471

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME- 279
           +  V+WN MI+GY Q G  DEA  LF +M  + I+   +    +  + +QL    +  E 
Sbjct: 472 RSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKEL 531

Query: 280 ---------------------MVKRMESLGIT---------PDVFTWTCMISGFAQNGRT 309
                                M  +   +G++          DV +W  +I+G+  +GR 
Sbjct: 532 HCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRG 591

Query: 310 SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS- 368
            +AL+LF++M  +G+ P+  T T  + AC+    +  G+E  +  + +   +  L   + 
Sbjct: 592 KEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTC 651

Query: 369 LINMYSKCEELEAAERVF-DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM--QESDV 425
           +++M  +   ++ A R+  +M  D D   W+S+++     G  G   ++  K+   E + 
Sbjct: 652 VVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEK 711

Query: 426 PPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           P N +  + L +G   +G  D+   +  RM      K    SW
Sbjct: 712 PENYVLISNLFAG---SGKWDDVRRVRGRMKDIGLQKDAGCSW 751



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 157/325 (48%), Gaps = 8/325 (2%)

Query: 31  FLCGNGRLNEAITVLD---SIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLV 86
            LCG  + ++    LD    +   G      T  +LL AC    S+H   ++H F L   
Sbjct: 379 LLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNG 438

Query: 87  TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
             +D F+   LLS+Y  CG    A+ +F+ M  R+L +W+ MI  YS++    E + LF 
Sbjct: 439 LAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFR 498

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M+ DG+ P +     +  AC        GK +H   +K  ++    V +S++ +Y K G
Sbjct: 499 QMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGG 558

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            +  ++R F+ + EKD  +WN +I+GY   G   EA  LF+KM R  +K    TF  ++ 
Sbjct: 559 CIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILM 618

Query: 267 SYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
           + +  G  +  +E   +M +L  I P +  +TC++    + GR   AL L +EM      
Sbjct: 619 ACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGD--- 675

Query: 326 PNGVTITSAISACTDLKALAMGMEI 350
           P+    +S +S+C     L +G ++
Sbjct: 676 PDSRIWSSLLSSCRIHGNLGLGEKV 700


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 289/896 (32%), Positives = 461/896 (51%), Gaps = 105/896 (11%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           LLQA      I + RK+H  ++  T +  D  + T+++++YA CG  DD+R VF+ +R +
Sbjct: 90  LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLM 179
           NL+ W+A+I +YSR++ + EV+E F  M+    L PD F +P +++AC    D   G  +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H LV+K G+     V N++++ Y   G +  A + F+ M E++ V+WNSMI  +   G +
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269

Query: 240 DEAHRLFDKMCRE------------------------EIKLG---------------VVT 260
           +E+  L  +M  E                        EI LG               +V 
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
            N L+  Y++ G C    +M+ +M +     +V +W  M+ GF+  G T    D+ ++M 
Sbjct: 330 NNALMDMYSKCG-CITNAQMIFKMNN---NKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385

Query: 321 FVG--VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
             G  V  + VTI +A+  C     L    E+H  ++K  F  + LV N+ +  Y+KC  
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           L  A+RVF  I+ K V SWN++I G+ Q+     + +  ++M+ S + P+  T   L+S 
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505

Query: 439 -----------------------------------YIQNGNEDEAVDLFQRMGKNDKVKR 463
                                              YI  G       LF  M   DK   
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM--EDK--- 560

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           +  SWN++I GY Q G  + ALGVFR+M         ++++ V  AC+ L +    +E H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
              L+  LE    +  SLID YAK+G+I  S  +F+G+  K   +WN++I GY +HG   
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            A+ LF++M+  G  P+  TFL ++ A + +G++  G +    +   + + P ++HY+ +
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 740

Query: 644 IDLYGRSGKLEEAMEFI-EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           ID+ GR+G+L++A+  + E+M  E D  IW++LL++CRIH N+++      +LF+LEP  
Sbjct: 741 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK 800

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG-----GW 757
                L+  +YA  GK ED  KVR+   E + R   G  WIE+   V++FV G     G+
Sbjct: 801 PENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGF 860

Query: 758 SE-----SYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGS 812
            E     S  ++  S +   P+ ++ +   S    EEE+ E++ G HSEKLAL + LI +
Sbjct: 861 EEIKSLWSILEMKISKMGYRPDTMSVQHDLS----EEEKIEQLRG-HSEKLALTYGLIKT 915

Query: 813 SQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S+   TIR+ KN+R+CV CH  AK +S +   EI + D+K  HHFKNG CSCGDYW
Sbjct: 916 SEGT-TIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 154/649 (23%), Positives = 284/649 (43%), Gaps = 107/649 (16%)

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPK-----ILQACGNCGDFEAGKLMHSLVIKLGMS 189
           D+ +R V E    +  D    D FL  +     +LQA G   D E G+ +H LV     S
Sbjct: 60  DKSFRTVQEF---VGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLV-----S 111

Query: 190 CVRRVRNS------VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
              R+RN       ++ +Y  CG    +R  F+++  K+   WN++IS Y +    DE  
Sbjct: 112 GSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVL 171

Query: 244 RLFDKM-CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
             F +M    ++     T+  +I++   +    + + +   +   G+  DVF    ++S 
Sbjct: 172 ETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSF 231

Query: 303 FAQNGRTSQALDLF-----------------------KEMSFV------------GVMPN 327
           +  +G  + AL LF                        E SF+              MP+
Sbjct: 232 YGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPD 291

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             T+ + +  C   + + +G  +H  AVK+    ++++ N+L++MYSKC  +  A+ +F 
Sbjct: 292 VATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK 351

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM----------------------QESDV 425
           M  +K+V SWN+M+ G+   G     +++  +M                       ES +
Sbjct: 352 MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411

Query: 426 PP---------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
           P                N +  N  ++ Y + G+   A  +F  +       +   SWN+
Sbjct: 412 PSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR-----SKTVNSWNA 466

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           LI G+ Q      +L    +M+ S   P+  T+ S+L AC+ L +    KE+HG ++R  
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           LE  L V  S++  Y   G +   + +FD M  K +++WN++I GY+ +GF   AL +F 
Sbjct: 527 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS----AMIDL 646
           QM  +G++    + + +  A SL   + LG++        Y +  ++E  +    ++ID+
Sbjct: 587 QMVLYGIQLCGISMMPVFGACSLLPSLRLGRE-----AHAYALKHLLEDDAFIACSLIDM 641

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
           Y ++G + ++ +    +  E  ++ W A++    IHG    A+   E +
Sbjct: 642 YAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 223/490 (45%), Gaps = 59/490 (12%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T + +L  C     I L + +H + + L  + ++ +   L+ +Y+KCGC+ +A+ +F+  
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG--LFPDDFLFPKILQACGNCGDFEA 175
             +N+ +W+ M+G +S +       ++   M+  G  +  D+      +  C +     +
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 413

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
            K +H   +K        V N+ +A Y KCG L +A+R F  +  K   +WN++I G+ Q
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473

Query: 236 IGEND-----EAHRLFD---------KMCR--------EEIKLGVVTFNILIRS------ 267
              ND     +AH              +C         + ++LG      +IR+      
Sbjct: 474 --SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 531

Query: 268 ---------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
                    Y   G+      +   ME       + +W  +I+G+ QNG   +AL +F++
Sbjct: 532 FVYLSVLSLYIHCGELCTVQALFDAMED----KSLVSWNTVITGYLQNGFPDRALGVFRQ 587

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   G+   G+++     AC+ L +L +G E H+ A+K    DD  +  SLI+MY+K   
Sbjct: 588 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 647

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           +  + +VF+ +K+K   SWN+MI GY   G   +A +LF +MQ +   P+ +T+  +++ 
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 707

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL------------- 485
              +G   E +    +M  +  +K N   +  +I    + GQ + AL             
Sbjct: 708 CNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV 767

Query: 486 GVFRKMQSSC 495
           G+++ + SSC
Sbjct: 768 GIWKSLLSSC 777



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 214/492 (43%), Gaps = 56/492 (11%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFL 83
           +T +      G  +    VL  +   G  V+ +  T +N +  C   + +   ++LH + 
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY- 420

Query: 84  NLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           +L  E   +  V    ++ YAKCG L  A+ VF  +R + + +W+A+IG +++    R  
Sbjct: 421 SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 480

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
           ++    M   GL PD F    +L AC        GK +H  +I+  +     V  SVL++
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 540

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           Y+ CG+L   +  F++M++K  V+WN++I+GY Q G  D A  +F +M    I+L  ++ 
Sbjct: 541 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 600

Query: 262 NILIRSYNQLGQCDVAME----------------------MVKRMESLGITPDVF----- 294
             +  + + L    +  E                      M  +  S+  +  VF     
Sbjct: 601 MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE 660

Query: 295 ----TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME- 349
               +W  MI G+  +G   +A+ LF+EM   G  P+ +T    ++AC     +  G+  
Sbjct: 661 KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRY 720

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF--DMIKDKDVYSWNSMIAGYCQ- 406
           +  +    G   ++     +I+M  +  +L+ A RV   +M ++ DV  W S+++  C+ 
Sbjct: 721 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS-CRI 779

Query: 407 -------AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
                       K +EL     E + P N +  + L +G    G  ++   + QRM +  
Sbjct: 780 HQNLEMGEKVAAKLFEL-----EPEKPENYVLLSNLYAGL---GKWEDVRKVRQRMNEMS 831

Query: 460 KVKRNTASWNSL 471
             K    SW  L
Sbjct: 832 LRKDAGCSWIEL 843



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 138/296 (46%), Gaps = 16/296 (5%)

Query: 6   LTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQ 65
           L T Q L   +  KS   +      +L  NG  + A+ V   +   G ++   + + +  
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTVITGYL-QNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605

Query: 66  ACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYT 124
           AC    S+ L R+ HA+ L  + E D F+   L+ +YAK G +  + +VF  ++E++  +
Sbjct: 606 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 665

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLV 183
           W+AMI  Y      +E ++LF  M + G  PDD  F  +L AC + G    G + +  + 
Sbjct: 666 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 725

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF-ESMDEKDGVA-WNSMISG-----YFQI 236
              G+    +    V+ +  + G+L  A R   E M E+  V  W S++S        ++
Sbjct: 726 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 785

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
           GE   A +LF+ +  E+ +  V+  N+    Y  LG+ +   ++ +RM  + +  D
Sbjct: 786 GEKVAA-KLFE-LEPEKPENYVLLSNL----YAGLGKWEDVRKVRQRMNEMSLRKD 835


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 273/882 (30%), Positives = 457/882 (51%), Gaps = 77/882 (8%)

Query: 59  TYINLLQACIDSN-SIHLARKLHAFLN----LVTEIDVFVKTKLLSVYAKCGCLDDAREV 113
           ++ ++L+AC      I  A ++HA +     L + I   +   L+ +YAK G +  AR+V
Sbjct: 113 SFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPI---ISNPLIGLYAKNGLIISARKV 169

Query: 114 FEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF 173
           F+++  ++  +W AMI  +S++    E + LF  M   G+FP  ++F  +L  C     F
Sbjct: 170 FDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLF 229

Query: 174 EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
           + G+ +H+LV K G S    V N+++ +Y +    + A + F  M  KD V++NS+ISG 
Sbjct: 230 DVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGL 289

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG-------------QCDVAMEM 280
            Q G +D A  LF KM R+ +K   VT   L+ +    G             +  ++ +M
Sbjct: 290 AQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDM 349

Query: 281 VKRMESLGI------------------TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
           +     L +                  T +V  W  M+  F +    S++  +F++M   
Sbjct: 350 IVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIK 409

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           G++PN  T  S +  CT + AL +G +IH+  +K GF  +V V + LI+MY+K  +L+ A
Sbjct: 410 GLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTA 469

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG---- 438
             +   + + DV SW ++I+GY Q     +A + F +M    +  + I ++  IS     
Sbjct: 470 HVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGI 529

Query: 439 -------------YIQNGNEDEA-----VDLFQRMGKNDKV--------KRNTASWNSLI 472
                        Y+   +ED +     V L+ R G+  +          +++ SWN LI
Sbjct: 530 QALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLI 589

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
           +G+ Q G   +AL VF +M  +    +  T  S + A A +    + K+IH  +++R  +
Sbjct: 590 SGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFD 649

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
           S + V N+LI  YAK G+I  +R  F  M  K+ ++WN++I GY  HG+ + A++LF++M
Sbjct: 650 SDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKM 709

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
           K  G  PN  TF+ ++ A S  G+V  G   F S+++ + ++P   HY+ ++DL  R+G 
Sbjct: 710 KQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGF 769

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQI 712
           L  A +FIE+MPIEPD++IW  LL+AC +H N+++   A + L +LEP D     L+  +
Sbjct: 770 LSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNM 829

Query: 713 YAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
           YA+ GK +   + R++ R    +   G+ WIEVKN V+ F  G      +D +Y +L  +
Sbjct: 830 YAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAEL 889

Query: 773 PENVTA----RSSHSGLC-IEEEEKEEISGIHSEKLALAFALIG-SSQAPHTIRIVKNIR 826
            +        +  +S L  +E+E+K+    IHSEKLA+ F L+  S   P  I ++KN+R
Sbjct: 890 NKKAAEIGYFQDRYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVP--IHVMKNLR 947

Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +C  CH   K+VS + +  I + D+   HHF+ G CSC DYW
Sbjct: 948 VCKDCHSWIKFVSKISNRAIIVRDAYRFHHFEGGICSCKDYW 989



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 195/710 (27%), Positives = 337/710 (47%), Gaps = 83/710 (11%)

Query: 58  NTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
            TYI LL  C++S S+   +KLH   L L    +  +  KL+ VY   G LD   +VFED
Sbjct: 11  QTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFED 70

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC-GNCGDFEA 175
           M  R++ +W  +I  +   +    V++LF  M+++ + P +  F  +L+AC G+      
Sbjct: 71  MPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRY 130

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
            + +H+ +I  G+ C   + N ++ +Y K G +I AR+ F+++  KD V+W +MISG+ Q
Sbjct: 131 AEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQ 190

Query: 236 IGENDEAHRLFDKMCREEI------------------------KLGVVTF---------- 261
            G  +EA  LF +M    I                        +L  + F          
Sbjct: 191 NGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYV 250

Query: 262 -NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
            N L+  Y+++     A ++  +M+S     D  ++  +ISG AQ G +  AL+LF +M 
Sbjct: 251 CNALVTLYSRMPNFVSAEKVFSKMQS----KDEVSFNSLISGLAQQGFSDGALELFTKMK 306

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
              + P+ VT+ S +SAC    AL  G ++HS  +K G + D++V  +L+++Y  C +++
Sbjct: 307 RDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIK 366

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-------- 432
            A  +F   + ++V  WN M+  + +     +++ +F +MQ   + PN  T+        
Sbjct: 367 TAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCT 426

Query: 433 ---------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
                                      +VLI  Y ++G  D A  + + + ++D V    
Sbjct: 427 SVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVV---- 482

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
            SW +LI+GY Q      AL  F++M +     + +   S + ACA + A N+ ++IH  
Sbjct: 483 -SWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQ 541

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
                    L + N+L+  YA+ G I  +   F+ + +KD I+WN LI G+   G+   A
Sbjct: 542 SYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDA 601

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           L +F QM    L+ +  TF S + A +    +  GK++   I +       IE  +A+I 
Sbjct: 602 LKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIK-RGFDSDIEVSNALIT 660

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
            Y + G +E+A     +MP + D S W A++T    HG  + AV   E++
Sbjct: 661 FYAKCGSIEDARREFCEMPEKNDVS-WNAMITGYSQHGYGNEAVNLFEKM 709



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 178/396 (44%), Gaps = 43/396 (10%)

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   G+  N  T    +  C +  +L    ++H   +K+GF ++ ++ N L+++Y    +
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------ 432
           L+   +VF+ + ++ V SW+ +I+G+ +     +  +LF  M E +V P  I++      
Sbjct: 61  LDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRA 120

Query: 433 ------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                         N LI  Y +NG    A  +F  +   D V 
Sbjct: 121 CSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSV- 179

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
               SW ++I+G+ Q G +  A+ +F +M ++  +P      SVL  C  +   +  +++
Sbjct: 180 ----SWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQL 235

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           H  V +        V N+L+  Y++  N V +  +F  M SKD +++NSLI G    GF 
Sbjct: 236 HALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFS 295

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
             AL+LF +MK   LKP+  T  S++ A +  G +  G+++   + +      MI    A
Sbjct: 296 DGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVE-GA 354

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           ++DLY     ++ A E       E +  +W  +L A
Sbjct: 355 LLDLYVNCSDIKTAHEMFLTAQTE-NVVLWNVMLVA 389



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 92/196 (46%), Gaps = 11/196 (5%)

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           NC T + +L  C    +  + K++HG +L+    +   + N L+D Y   G++     +F
Sbjct: 9   NCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVF 68

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS-----L 613
           + M ++ + +W+ +I G++     +  LDLF  M    + P   +F S++ A S     +
Sbjct: 69  EDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGI 128

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
                +  ++ C    C  II      + +I LY ++G +  A +  +++  + DS  W 
Sbjct: 129 RYAEQIHARIICHGLLCSPIIS-----NPLIGLYAKNGLIISARKVFDNLCTK-DSVSWV 182

Query: 674 ALLTACRIHGNIDLAV 689
           A+++    +G  + A+
Sbjct: 183 AMISGFSQNGYEEEAI 198


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 287/878 (32%), Positives = 448/878 (51%), Gaps = 97/878 (11%)

Query: 31  FLCGNGRLNEAITVLDSIATQGAKVRRNTYI-NLLQAC-IDSNSIHLARKLHAFLNLVTE 88
            L G GRL     VL++       + RNT   N + +C + +  I +AR+L    + +  
Sbjct: 102 LLSGYGRLGR---VLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRL---FDAMPS 155

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            DV     +L+ Y     + DAR +FE M ERNL +W+ MI  Y R +   +  ++F  M
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK-CGK 207
            ++GL PD   F   L A    G+ +  + +  L +K G      +  ++L VY +    
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK------MCREEIKLG---- 257
           L  A +FFESM E++   W++MI+     G  D A  ++++       CR  +  G    
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQC 335

Query: 258 -----------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
                            VV++N LI  Y Q G  + A E+  +M       +  +W  MI
Sbjct: 336 GRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMP----FRNTISWAGMI 391

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +G+AQNGR+ +AL L +E+   G++P+  ++TS   AC+++ AL  G ++HSLAVK+G  
Sbjct: 392 AGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQ 451

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            +    N+LI MY KC  +E A +VF  +  KD+                          
Sbjct: 452 FNSFACNALITMYGKCRNMEYARQVFSRMVTKDI-------------------------- 485

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
                    ++WN  ++  +QN   DEA + F  M     + R+  SW ++I+ Y    Q
Sbjct: 486 ---------VSWNSFLAALVQNDLLDEARNTFDNM-----LSRDDVSWTTIISAYAHAEQ 531

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
            N A+G F+ M      PN   +  +L  C  L AS   ++IH   ++  ++S L V N+
Sbjct: 532 SNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANA 591

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           LI  Y K G    SR IFD M  +DI TWN++I GY  HG    A+ ++  M+S G+ PN
Sbjct: 592 LISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPN 650

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
             TF+ ++ A S AG+VD G K F S+++ Y + P+ EHY+ M+DL GR+G ++ A +FI
Sbjct: 651 EVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFI 710

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
            DMPIEPD+ IW ALL AC+IH N ++   A E+LF +EP +     ++  IY+  G   
Sbjct: 711 YDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWG 770

Query: 721 DALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG-WSESYSDL------LYSWLQN-- 771
           +  +VRK+ ++       G  W ++K+ +++FVTG    E   ++      LY+ L+   
Sbjct: 771 EVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATG 830

Query: 772 -VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
            VP+  T    H    I+EE+KE     HSEKLA+A+ L+ + +    I+I+KN+R+C  
Sbjct: 831 YVPD--TEFVLHD---IDEEQKESSLLYHSEKLAVAYCLLATPKG-MPIQILKNLRICGD 884

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   K+VS +   +I + D    HHF+NG CSC D+W
Sbjct: 885 CHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 160/624 (25%), Positives = 282/624 (45%), Gaps = 110/624 (17%)

Query: 190 CVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
           C  R+R+       + G++  AR  F++M  +D +AWNSMIS Y   G  D A  L+D +
Sbjct: 37  CSARIRD-----LGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAI 91

Query: 250 CREEIKLG---------------------------VVTFNILIRSYNQLGQCDVAMEMVK 282
               ++ G                            V +N +I  Y Q G   +A  +  
Sbjct: 92  SGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFD 151

Query: 283 RMESLGITP---------------------------DVFTWTCMISGFAQNGRTSQALDL 315
            M S  ++                            ++ +WT MISG+ +     +A D+
Sbjct: 152 AMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDI 211

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           F +M   G++P+     SA+SA   L  L +   +  LA+K GF  DV++G +++N+YS+
Sbjct: 212 FCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSR 271

Query: 376 -CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG-------------------------- 408
               L+ A + F+ + +++ Y+W++MIA     G                          
Sbjct: 272 DTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITG 331

Query: 409 --YCGKAYELFIKMQESDVP-PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
              CG+  +  I  ++  +P P V++WN LI+GY+QNG  +EA +LF +M       RNT
Sbjct: 332 LAQCGRIDDARILFEQ--IPEPIVVSWNALITGYMQNGMVNEAKELFDKM-----PFRNT 384

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
            SW  +IAGY Q G+   ALG+ +++  S   P+  ++ S+  AC+ +VA     ++H  
Sbjct: 385 ISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSL 444

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
            ++   + +    N+LI  Y K  N+ Y+R +F  M +KDI++WNS +   V +     A
Sbjct: 445 AVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEA 504

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
            + FD M    L  +  ++ +II A++ A   +     F ++  C   +P     + ++ 
Sbjct: 505 RNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMF-CEHELPNSPILTILLG 559

Query: 646 LYGRSG--KLEEAMEFIE-DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL-EPG 701
           + G  G  K+ + +  +   + ++ +  +  AL++     G  D       R+FDL E  
Sbjct: 560 VCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-----SRRIFDLMEER 614

Query: 702 DVLIQRLILQIYAICGKPEDALKV 725
           D+     I+  YA  G   +A+K+
Sbjct: 615 DIFTWNTIITGYAQHGLGREAIKM 638



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 23/158 (14%)

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
           E+ GC  R             I    + G +  +R +FD M  +DII WNS+I  Y  +G
Sbjct: 33  EVSGCSAR-------------IRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNG 79

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
              AA DL+D +    ++    T   ++  +   G V   ++VF  + E   +      +
Sbjct: 80  MPDAARDLYDAISGGNMR----TGAILLSGYGRLGRVLEARRVFDGMLERNTVA-----W 130

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           +AMI  Y ++G +  A    + MP   D S W ++LT 
Sbjct: 131 NAMISCYVQNGDITMARRLFDAMP-SRDVSSWNSMLTG 167


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 287/878 (32%), Positives = 448/878 (51%), Gaps = 97/878 (11%)

Query: 31  FLCGNGRLNEAITVLDSIATQGAKVRRNTYI-NLLQAC-IDSNSIHLARKLHAFLNLVTE 88
            L G GRL     VL++       + RNT   N + +C + +  I +AR+L    + +  
Sbjct: 102 LLSGYGRLGR---VLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRL---FDAMPS 155

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            DV     +L+ Y     + DAR +FE M ERNL +W+ MI  Y R +   +  ++F  M
Sbjct: 156 RDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKM 215

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK-CGK 207
            ++GL PD   F   L A    G+ +  + +  L +K G      +  ++L VY +    
Sbjct: 216 HREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK------MCREEIKLG---- 257
           L  A +FFESM E++   W++MI+     G  D A  ++++       CR  +  G    
Sbjct: 276 LDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQC 335

Query: 258 -----------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
                            VV++N LI  Y Q G  + A E+  +M       +  +W  MI
Sbjct: 336 GRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMP----FRNTISWAGMI 391

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +G+AQNGR+ +AL L +E+   G++P+  ++TS   AC+++ AL  G ++HSLAVK+G  
Sbjct: 392 AGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQ 451

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            +    N+LI MY KC  +E A +VF  +  KD+                          
Sbjct: 452 FNSFACNALITMYGKCRNMEYARQVFSRMVTKDI-------------------------- 485

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
                    ++WN  ++  +QN   DEA + F  M     + R+  SW ++I+ Y    Q
Sbjct: 486 ---------VSWNSFLAALVQNDLLDEARNTFDNM-----LSRDDVSWTTIISAYAHAEQ 531

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
            N A+G F+ M      PN   +  +L  C  L AS   ++IH   ++  ++S L V N+
Sbjct: 532 SNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANA 591

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           LI  Y K G    SR IFD M  +DI TWN++I GY  HG    A+ ++  M+S G+ PN
Sbjct: 592 LISMYFKCG-CADSRRIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPN 650

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
             TF+ ++ A S AG+VD G K F S+++ Y + P+ EHY+ M+DL GR+G ++ A +FI
Sbjct: 651 EVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFI 710

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
            DMPIEPD+ IW ALL AC+IH N ++   A E+LF +EP +     ++  IY+  G   
Sbjct: 711 YDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWG 770

Query: 721 DALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG-WSESYSDL------LYSWLQN-- 771
           +  +VRK+ ++       G  W ++K+ +++FVTG    E   ++      LY+ L+   
Sbjct: 771 EVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLEELYTLLKATG 830

Query: 772 -VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
            VP+  T    H    I+EE+KE     HSEKLA+A+ L+ + +    I+I+KN+R+C  
Sbjct: 831 YVPD--TEFVLHD---IDEEQKESSLLYHSEKLAVAYCLLATPKG-MPIQILKNLRICGD 884

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   K+VS +   +I + D    HHF+NG CSC D+W
Sbjct: 885 CHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 160/624 (25%), Positives = 282/624 (45%), Gaps = 110/624 (17%)

Query: 190 CVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
           C  R+R+       + G++  AR  F++M  +D +AWNSMIS Y   G  D A  L+D +
Sbjct: 37  CSARIRD-----LGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAI 91

Query: 250 CREEIKLG---------------------------VVTFNILIRSYNQLGQCDVAMEMVK 282
               ++ G                            V +N +I  Y Q G   +A  +  
Sbjct: 92  SGGNMRTGAILLSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFD 151

Query: 283 RMESLGITP---------------------------DVFTWTCMISGFAQNGRTSQALDL 315
            M S  ++                            ++ +WT MISG+ +     +A D+
Sbjct: 152 AMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDI 211

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           F +M   G++P+     SA+SA   L  L +   +  LA+K GF  DV++G +++N+YS+
Sbjct: 212 FCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSR 271

Query: 376 -CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG-------------------------- 408
               L+ A + F+ + +++ Y+W++MIA     G                          
Sbjct: 272 DTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIACRTALITG 331

Query: 409 --YCGKAYELFIKMQESDVP-PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
              CG+  +  I  ++  +P P V++WN LI+GY+QNG  +EA +LF +M       RNT
Sbjct: 332 LAQCGRIDDARILFEQ--IPEPIVVSWNALITGYMQNGMVNEAKELFDKM-----PFRNT 384

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
            SW  +IAGY Q G+   ALG+ +++  S   P+  ++ S+  AC+ +VA     ++H  
Sbjct: 385 ISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSL 444

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
            ++   + +    N+LI  Y K  N+ Y+R +F  M +KDI++WNS +   V +     A
Sbjct: 445 AVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEA 504

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
            + FD M    L  +  ++ +II A++ A   +     F ++  C   +P     + ++ 
Sbjct: 505 RNTFDNM----LSRDDVSWTTIISAYAHAEQSNEAMGAFKTMF-CEHELPNSPILTILLG 559

Query: 646 LYGRSG--KLEEAMEFIE-DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL-EPG 701
           + G  G  K+ + +  +   + ++ +  +  AL++     G  D       R+FDL E  
Sbjct: 560 VCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCAD-----SRRIFDLMEER 614

Query: 702 DVLIQRLILQIYAICGKPEDALKV 725
           D+     I+  YA  G   +A+K+
Sbjct: 615 DIFTWNTIITGYAQHGLGREAIKM 638



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 23/158 (14%)

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
           E+ GC  R             I    + G +  +R +FD M  +DII WNS+I  Y  +G
Sbjct: 33  EVSGCSAR-------------IRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNG 79

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
              AA DL+D +    ++    T   ++  +   G V   ++VF  + E   +      +
Sbjct: 80  MPDAARDLYDAISGGNMR----TGAILLSGYGRLGRVLEARRVFDGMLERNTVA-----W 130

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           +AMI  Y ++G +  A    + MP   D S W ++LT 
Sbjct: 131 NAMISCYVQNGDITMARRLFDAMP-SRDVSSWNSMLTG 167


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 261/811 (32%), Positives = 407/811 (50%), Gaps = 86/811 (10%)

Query: 65  QACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYT 124
           +A +     H AR+L   +      + F    LLS+YAK G L DAR VF  M ER+  +
Sbjct: 72  RAGVGRGCFHEARRLFDDIPYARR-NAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVS 130

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           W+ M+   +R  R+ + V+ F  MV +GL P  F+   +L +C        G+ +HS VI
Sbjct: 131 WTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVI 190

Query: 185 KLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHR 244
           KLG+S    V NSVL +Y KCG    AR  FE M  +   +WN+                
Sbjct: 191 KLGLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRSESSWNA---------------- 234

Query: 245 LFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFA 304
                              ++  Y   G+ D+A+ M + ME   I     +W  +I+G+ 
Sbjct: 235 -------------------MVSLYTHQGRMDLALSMFENMEERSIV----SWNAIIAGYN 271

Query: 305 QNGRTSQALDLFKEMSFVGVM-PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
           QNG    AL  F  M     M P+  T+TS +SAC +L+ L MG ++HS  ++ G     
Sbjct: 272 QNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSS 331

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
            + N+LI+ Y+K   +E A R+ D     D+                             
Sbjct: 332 QIMNALISTYAKSGSVETARRIMDKAVVADL----------------------------- 362

Query: 424 DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
               NVI++  L+ GY++ G+  +A ++F  M   D +     +W ++I GY+Q GQ + 
Sbjct: 363 ----NVISFTALLEGYVKLGDTKQAREVFDVMNNRDVI-----AWTAMIVGYEQNGQNDE 413

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID 543
           A+ +FR M  S   PN  T+ +VL ACA L      K+IH   +R   E S+ V N++I 
Sbjct: 414 AMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIIT 473

Query: 544 TYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
            YA+SG++  +R +FD +   K+ +TW S+I     HG    A+ LF++M   G+KP+R 
Sbjct: 474 VYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVGVKPDRV 533

Query: 603 TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           T++ +  A + AG +D GK+ +  +   + I+P + HY+ M+DL  R+G L EA EFI+ 
Sbjct: 534 TYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQR 593

Query: 663 MPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDA 722
           MP+ PD+ +W +LL ACR+  N DLA LA E+L  ++P +      +  +Y+ CG+  DA
Sbjct: 594 MPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSALANVYSACGRWNDA 653

Query: 723 LKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSH 782
            ++ KL ++   +   G  W  V++ V+ F          D +      + E +      
Sbjct: 654 ARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEMWEEIKKAGFV 713

Query: 783 SGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKY 837
             L      +++E KEE+   HSEKLA+AF LI + +   T+RI+KN+R+C  CH   K+
Sbjct: 714 PDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKT-TLRIMKNLRVCNDCHTAIKF 772

Query: 838 VSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +S +   EI + D+   HHF++G CSC DYW
Sbjct: 773 ISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 145/576 (25%), Positives = 251/576 (43%), Gaps = 118/576 (20%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK----LIWARRFF 215
           F ++LQ      +  AG+ +H+  +K G+     + N++L+ Y + G        ARR F
Sbjct: 28  FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLF 87

Query: 216 ESMD--EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
           + +    ++   WNS++S Y + G   +A  +F +M                        
Sbjct: 88  DDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPER--------------------- 126

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
                             D  +WT M+ G  + GR   A+  F +M   G+ P+   +T+
Sbjct: 127 ------------------DAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAPSQFMLTN 168

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            +S+C   +A  +G ++HS  +K+G +  V V NS++ MY KC + E A  VF+ +K + 
Sbjct: 169 VLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMKVRS 228

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ 453
             SWN+M++ Y   G    A  +F  M+E     ++++WN +I+GY QNG +D A+  F 
Sbjct: 229 ESSWNAMVSLYTHQGRMDLALSMFENMEER----SIVSWNAIIAGYNQNGLDDMALKFFS 284

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
           RM                                   + +S   P+  T+ SVL ACA L
Sbjct: 285 RM-----------------------------------LTASSMEPDEFTVTSVLSACANL 309

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI---------------- 557
                 K++H  +LR  +  S  +MN+LI TYAKSG++  +R I                
Sbjct: 310 RMLKMGKQMHSYILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTA 369

Query: 558 -----------------FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
                            FD M+++D+I W ++I GY  +G    A++LF  M   G +PN
Sbjct: 370 LLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPN 429

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
             T  +++ A +    +  GK++ C      Q    +   +A+I +Y RSG +  A    
Sbjct: 430 SHTLAAVLSACASLAYLGYGKQIHCRAIRSLQ-EQSVSVSNAIITVYARSGSVPLARRVF 488

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF 696
           + +    ++  W +++ A   HG  + A++  E + 
Sbjct: 489 DQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEML 524



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 125/511 (24%), Positives = 222/511 (43%), Gaps = 78/511 (15%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVK 94
           GR  +A+     +  +G    +    N+L +C  + +  + RK+H+F + L     V V 
Sbjct: 142 GRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVA 201

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR----------------- 137
             +L +Y KCG  + AR VFE M+ R+  +W+AM+  Y+   R                 
Sbjct: 202 NSVLYMYGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIV 261

Query: 138 -WREVVE------------LFF--LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            W  ++              FF  ++    + PD+F    +L AC N    + GK MHS 
Sbjct: 262 SWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSY 321

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES--MDEKDGVAWNSMISGYFQIGEND 240
           +++ GM    ++ N++++ Y K G +  ARR  +   + + + +++ +++ GY ++G+  
Sbjct: 322 ILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTK 381

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
           +A  +FD M   +    V+ +  +I  Y Q GQ D AME+ + M   G  P+        
Sbjct: 382 QAREVFDVMNNRD----VIAWTAMIVGYEQNGQNDEAMELFRSMIRSG--PE-------- 427

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
                                    PN  T+ + +SAC  L  L  G +IH  A++    
Sbjct: 428 -------------------------PNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQE 462

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMI-KDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             V V N++I +Y++   +  A RVFD I   K+  +W SMI    Q G   +A  LF +
Sbjct: 463 QSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEE 522

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M    V P+ +T+  + S     G  D+    +++M     +    + +  ++    + G
Sbjct: 523 MLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAG 582

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               A    ++M  +   P+ V   S+L AC
Sbjct: 583 LLTEAHEFIQRMPVA---PDTVVWGSLLAAC 610



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 77/394 (19%), Positives = 168/394 (42%), Gaps = 22/394 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG+ +EA+ +  S+   G +   +T   +L AC     +   +++H   +  + E  V V
Sbjct: 408 NGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQEQSVSV 467

Query: 94  KTKLLSVYAKCGCLDDAREVFEDM-RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              +++VYA+ G +  AR VF+ +   +   TW++MI A ++     + + LF  M++ G
Sbjct: 468 SNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFEEMLRVG 527

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVI-KLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           + PD   +  +  AC + G  + GK  +  ++ + G+         ++ +  + G L  A
Sbjct: 528 VKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEA 587

Query: 212 RRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
             F + M    D V W S+++        D A    +K+   +       ++ L   Y+ 
Sbjct: 588 HEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPD-NSGAYSALANVYSA 646

Query: 271 LGQCDVAMEMVKRMESLGITPDV-FTWTCMISGF-----------AQNGRTSQALDLFKE 318
            G+ + A  + K  +   +  +  F+WT + S              ++    +A ++++E
Sbjct: 647 CGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKKAAEMWEE 706

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF--TDDVLVGNSLINMYSKC 376
           +   G +P+  ++   +    +LK   +      LA+  G   T +      + N+   C
Sbjct: 707 IKKAGFVPDLNSVLHDVD--DELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKNL-RVC 763

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
            +   A +    + D+++   ++    + + GYC
Sbjct: 764 NDCHTAIKFISKVVDREIIVRDATRFHHFRDGYC 797


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 287/917 (31%), Positives = 466/917 (50%), Gaps = 96/917 (10%)

Query: 32  LCGNGRLNEAITVLDSIATQGAK------VRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
            C  G L+++  V+   A           + R     LLQA      I + RK+H  ++ 
Sbjct: 53  FCETGDLDKSFRVVQEFAGDDESSSDVFLLVREALGLLLQASGKRKDIEMGRKIHHLVSG 112

Query: 86  VTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
            T +  D  + T+++++YA CG  DD+R  F+ +R +NL+ W+A+I +YSR++ + EV+E
Sbjct: 113 STRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLE 172

Query: 144 LFFLMV-QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
           +F  M+ +  L PD+F FP +++AC    D   G  +H LV+K G+     V N++++ Y
Sbjct: 173 MFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFY 232

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD--------KMCREEI 254
              G +  A + F+ M E++ V+WNSMI  +   G  D+   + D         +C  E 
Sbjct: 233 GTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG--DDGAFMPDVATVVTVLPVCARER 290

Query: 255 KLGV-----------------VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
           ++GV                 V  N L+  Y++ G C +  +M+ ++ +     +V +W 
Sbjct: 291 EIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWG-CIIDSQMIFKLNN---NKNVVSWN 346

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVG---VMPNGVTITSAISACTDLKALAMGMEIHSLA 354
            M+ GF+  G      DL ++M   G   V  + VTI +A+  C D   L    E+H  +
Sbjct: 347 TMVGGFSAEGDIHGTFDLLRQM-LAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYS 405

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           +K  F  D L+ N+ +  Y+KC  L  A+RVF  I+ K + SWN++I GY Q+     + 
Sbjct: 406 LKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSL 465

Query: 415 ELFIKMQESDVPPNVITWNVLISG-----------------------------------Y 439
           +  ++M+ S + P+  T   L+S                                    Y
Sbjct: 466 DAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY 525

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
           I  G       LF  M  N  V     SWN++I G+ Q G    ALG+FR+M      P 
Sbjct: 526 IHCGELCTVQVLFDAMEDNSLV-----SWNTVITGHLQNGFPERALGLFRQMVLYGIQPC 580

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
            +++++V  AC+ L +    +E H   L+  LE +  +  S+ID YAK+G I  S  +F+
Sbjct: 581 GISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFN 640

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
           G+  K   +WN++I GY +HG    A+ LF++M+  G  P+  TFL ++ A + +G++  
Sbjct: 641 GLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHE 700

Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
           G +    +   + + P ++HY+ +ID+ GR+G+L+ A+    +M  EPD  IW +LL+ C
Sbjct: 701 GLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWC 760

Query: 680 RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFG 739
           RIH N+++      +LF LEP       L+  +YA  GK +D  +VR+  +E + R   G
Sbjct: 761 RIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAG 820

Query: 740 QCWIEVKNLVYTFVTG-----GWSESYSDLLYSWLQNVPENVTARSSHSGL---CIEEEE 791
             WIE+   V++FV G     G+ E  S  L+S L+     +  R   S +     EEE+
Sbjct: 821 CSWIELNGKVFSFVVGERFLDGFEEIKS--LWSILEMKIWKMGYRPDTSSVQHDLSEEEK 878

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
            E++ G HSEKLA+ + LI +S+   T+R+ KN+R+CV CH  AK +S +   EI + D+
Sbjct: 879 IEQLRG-HSEKLAITYGLIKTSEGT-TLRVYKNLRICVDCHNAAKLISKVMEREIVVRDN 936

Query: 852 KCLHHFKNGQCSCGDYW 868
           K  HHF  G CSCGDYW
Sbjct: 937 KRFHHFNKGFCSCGDYW 953


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 290/923 (31%), Positives = 462/923 (50%), Gaps = 92/923 (9%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV 86
           T L  LC  G L +A+ +L S  T G    +  Y  +L       ++    ++HA     
Sbjct: 29  TSLKQLCKEGNLRQALRLLTS-QTPGRSPPQEHYGWVLDLVAAKKAVAQGVQVHAHAVAT 87

Query: 87  TEI---DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
             +   D F+ TKLL +Y KCG + DAR +F+ M  R +++W+A+IGAY       E + 
Sbjct: 88  GSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALG 147

Query: 144 LFFLM---VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
           ++  M      G+ PD      +L+A G  GD   G  +H L +K G+     V N+++A
Sbjct: 148 VYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIA 207

Query: 201 VYVKCGKLIWARRFFESM-DEKDGVAWNSMISGYFQIGENDEAHRLFDKM---------- 249
           +Y KCG L  A R FE M D +D  +WNSMISG  Q G   +A  LF  M          
Sbjct: 208 MYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSY 267

Query: 250 --------CREEIKLGV----------------VTFNILIRSYNQLGQCDVAMEMVKRME 285
                   C E  +L +                +  N L+  Y + G+ D A+ + + ++
Sbjct: 268 TTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQCNALLVMYTKCGRVDSALRVFREID 327

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
                 D  +W  M+S + QNG  ++A++   EM   G  P+   I S  SA   L  L 
Sbjct: 328 E----KDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLL 383

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
            G E+H+ A+K     D  VGN+L++MY KC  +E +  VFD ++ KD  SW ++I  Y 
Sbjct: 384 NGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYA 443

Query: 406 QAGYCGKAYELFIKMQES--DVPP--------------------------------NVIT 431
           Q+    +A E+F + Q+    V P                                +++ 
Sbjct: 444 QSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNGLLDLVV 503

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            N +I  Y + G    ++ +F+ + + D V     +W S+I  Y   G  N AL +F +M
Sbjct: 504 KNRIIDIYGECGEVYHSLKMFETVEQKDIV-----TWTSMINCYANSGLLNEALVLFAEM 558

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
           QS+   P+ V ++S+L A   L +  K KE+HG ++RR+      +++SL+D Y+  G++
Sbjct: 559 QSTDVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSL 618

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             +  +F+ +  KD++ W ++I    +HG    A+DLF +M   G+ P+  +FL+++ A 
Sbjct: 619 SGALKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYAC 678

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
           S + +V+ GK     +   Y++ P  EHY+ ++DL GRSG+ EEA EFI+ MP++P S +
Sbjct: 679 SHSKLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVV 738

Query: 672 WEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
           W +LL ACR+H N +LAV+A  RL +LEP +     L+  ++A  GK  +A +VR    E
Sbjct: 739 WCSLLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISE 798

Query: 732 NTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC----- 786
              R      WIE+ N V+TF T   S   ++ +   L  + E +     ++        
Sbjct: 799 RGLRKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLH 858

Query: 787 -IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCE 845
            + EEEK ++   HSE+LA++F LI +++    +RI KN+R+C  CHE  K VS +   +
Sbjct: 859 DVSEEEKVDVLHRHSERLAISFGLI-NTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRD 917

Query: 846 IFLADSKCLHHFKNGQCSCGDYW 868
           I + D+   HHF  G CSCGD+W
Sbjct: 918 IVVRDANRFHHFSGGSCSCGDFW 940


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 268/838 (31%), Positives = 432/838 (51%), Gaps = 94/838 (11%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA--RKLHAFLNLVTEI--DVFVKT 95
           +A+ +LDS+        ++T  N    C++S +  L+  R+ HA + L T +  D  + T
Sbjct: 6   QALALLDSV--------QHTIFN----CLNSTTASLSQTRQAHAHI-LKTGLFNDTHLAT 52

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
           KLLS YA   C  DA  V + + E N++++S +I A+S+  ++   +  F  M+  GL P
Sbjct: 53  KLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMP 112

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D+ + P  ++AC      +  + +H +    G      V++S++ +Y+KC ++       
Sbjct: 113 DNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQI------- 165

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
                                    +AHR+FD+M   +    VV+++ L+ +Y + G  D
Sbjct: 166 ------------------------RDAHRVFDRMFEPD----VVSWSALVAAYARQGCVD 197

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            A  +   M   G+ P++ +W  MI+GF  +G  S+A+ +F +M   G  P+G TI+S +
Sbjct: 198 EAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVL 257

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
            A  DL+ L MG+ IH   +K G   D  V ++LI+MY KC       +VFD +   DV 
Sbjct: 258 PAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDV- 316

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
                       G C                      N  I G  +NG  + ++ LF+++
Sbjct: 317 ------------GSC----------------------NAFIFGLSRNGQVESSLRLFRQL 342

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
            K+  ++ N  SW S+IA   Q G+   AL +FR+MQ +   PN VTI  +LPAC  + A
Sbjct: 343 -KDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAA 401

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
               K  H   LRR + + + V ++LID YAK G I  SR  FDG+ +K+++ WN++I G
Sbjct: 402 LMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAG 461

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
           Y +HG    A+++FD M+  G KP+  +F  ++ A S +G+ + G   F S++  Y I  
Sbjct: 462 YAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEA 521

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
            +EHY+ M+ L  R+GKLE+A   I  MP+ PD+ +W ALL++CR+H N+ L  +A E+L
Sbjct: 522 RVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKL 581

Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
           F+LEP +     L+  IYA  G   +  +VR + +    R + G  WIEVKN V+  + G
Sbjct: 582 FELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAG 641

Query: 756 GWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALI 810
             S      +   L  +   +        +      +EE++KE+I   HSEKLA+ F L+
Sbjct: 642 DKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLL 701

Query: 811 GSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +    + ++++KN+R+C  CH   K++S     EIF+ D+   HHFK G CSCGDYW
Sbjct: 702 NTPPG-YPLQVIKNLRICGDCHVVIKFISSFERREIFVRDTNRFHHFKEGACSCGDYW 758



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 225/491 (45%), Gaps = 71/491 (14%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKT 95
           + + A++    + T+G         + ++AC   +++  AR++H   ++   + D FV++
Sbjct: 94  QFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQS 153

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR----DQRWR------------ 139
            L+ +Y KC  + DA  VF+ M E ++ +WSA++ AY+R    D+  R            
Sbjct: 154 SLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQP 213

Query: 140 -------------------EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
                              E V +F  M   G  PD      +L A G+  D   G L+H
Sbjct: 214 NLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIH 273

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
             VIK G+   + V ++++ +Y KC       + F+ MD  D  + N+ I G  + G+ +
Sbjct: 274 GYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVE 333

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            + RLF ++  + ++L VV++  +I   +Q G+   A+E+ + M+  G+ P         
Sbjct: 334 SSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKP--------- 384

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
                                     N VTI   + AC ++ AL  G   H  +++ G +
Sbjct: 385 --------------------------NSVTIPCLLPACGNIAALMHGKAAHCFSLRRGIS 418

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            DV VG++LI+MY+KC  ++A+   FD I  K++  WN++IAGY   G   +A E+F  M
Sbjct: 419 TDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLM 478

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
           Q S   P++I++  ++S   Q+G  +E    F  M     ++     +  ++    + G+
Sbjct: 479 QRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGK 538

Query: 481 KNNALGVFRKM 491
              A  + R+M
Sbjct: 539 LEQAYAMIRRM 549



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 3/200 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NGR  EA+ +   +   G K    T   LL AC +  ++   +  H F L      DV+V
Sbjct: 364 NGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYV 423

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAKCG +  +R  F+ +  +NL  W+A+I  Y+   + +E +E+F LM + G 
Sbjct: 424 GSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQ 483

Query: 154 FPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  +L AC   G  E G    +S+  K G+         ++ +  + GKL  A 
Sbjct: 484 KPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAY 543

Query: 213 RFFESMD-EKDGVAWNSMIS 231
                M    D   W +++S
Sbjct: 544 AMIRRMPVNPDACVWGALLS 563


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 284/888 (31%), Positives = 456/888 (51%), Gaps = 85/888 (9%)

Query: 56  RRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVF 114
           R+  + ++ +A   + +     KLH+ +  L     V    KL++ YA      D    F
Sbjct: 71  RQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAH---FRDPTSSF 127

Query: 115 EDMR----ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
              R      N+Y W+++I A + +  + E + L+    +  L PD + FP ++ AC   
Sbjct: 128 SVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGL 187

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
            DFE  K +H  V+ +G      + N+++ +Y +   L  AR+ FE M  +D V+WNS+I
Sbjct: 188 LDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLI 247

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVV----TFNILIRSYNQLGQCDVAMEMVKRMES 286
           SGY   G  +EA  ++ +       LGVV    T + ++R+   LG  +    +   +E 
Sbjct: 248 SGYNANGYWNEALEIYYRF----RNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEK 303

Query: 287 LGITPDVF-------------------------------TWTCMISGFAQNGRTSQALDL 315
           +GI  DV                                +W  MI G++Q G   +++ L
Sbjct: 304 IGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKL 363

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           F EM      P+ +TITS + AC  L  L  G  +H   +  G+  D    N LINMY+K
Sbjct: 364 FMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAK 422

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
           C  L A++ VF  +K KD  SWNSMI  Y Q G   +A +LF KM ++DV P+ +T+ +L
Sbjct: 423 CGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVML 481

Query: 436 ISGYIQNGN----------------------EDEAVDLFQRMGK-NDKVK-------RNT 465
           +S   Q G+                       +  VD++ + G+  D +K       R+ 
Sbjct: 482 LSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDI 541

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
            +WN++IA        N  L +  +M++    P+  T+LS+LP C+ L A  + KEIHGC
Sbjct: 542 ITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGC 601

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
           + +  LES +PV N LI+ Y+K G++  S  +F  M +KD++TW +LI    ++G    A
Sbjct: 602 IFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKA 661

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           +  F +M++ G+ P+   F++II A S +G+V+ G   F  + + Y+I P IEHY+ ++D
Sbjct: 662 VRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVD 721

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           L  RS  L++A +FI  MP++PDSSIW ALL+ACR+ G+ ++A    ER+ +L P D   
Sbjct: 722 LLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIELNPDDTGY 781

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG-GWSESYSDL 764
             L+  +YA  GK +    +RK  +    +   G  W+E++N VY F TG  +SE + ++
Sbjct: 782 YVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFSEQFEEV 841

Query: 765 --LYSWLQNV--PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIR 820
             L   L  +   E   A        I+E+EK +I   HSE+LA+AF L+ +++    ++
Sbjct: 842 NKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLL-NTKPGTPLQ 900

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           ++KN+R+C  CH   KY+S +   E+ + D+   H FK+G CSCGDYW
Sbjct: 901 VMKNLRVCEDCHTVTKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 147/461 (31%), Positives = 224/461 (48%), Gaps = 34/461 (7%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVF 92
            NG  NEA+ +       G      T  ++L+AC    S+     +H  +  +  + DV 
Sbjct: 252 ANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVI 311

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V   LLS+Y K   L D R +F+ M  R+  +W+ MI  YS+   + E ++LF  MV   
Sbjct: 312 VNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ- 370

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             PD      ILQACG+ GD E GK +H  +I  G  C     N ++ +Y KCG L+ ++
Sbjct: 371 FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQ 430

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
             F  M  KD V+WNSMI+ Y Q G  DEA +LF KM + ++K   VT+ +L+    QLG
Sbjct: 431 EVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLG 489

Query: 273 --------QCDVA--------------MEMVKRMESLGITPDVF---------TWTCMIS 301
                    CD+A              ++M  +   +G +  VF         TW  +I+
Sbjct: 490 DLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIA 549

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
               +   +  L +   M   GV P+  T+ S +  C+ L A   G EIH    K+G   
Sbjct: 550 SCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLES 609

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           DV VGN LI MYSKC  L  + +VF ++K KDV +W ++I+     G   KA   F +M+
Sbjct: 610 DVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEME 669

Query: 422 ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
            + + P+ + +  +I     +G  +E ++ F RM K+ K++
Sbjct: 670 AAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIE 710


>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 268/847 (31%), Positives = 430/847 (50%), Gaps = 47/847 (5%)

Query: 30  DFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTE 88
           +F    G  +E + V   +  +G K        +L+ C+    + L  ++HA  L    +
Sbjct: 104 EFASFGGDSHEILEVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQ 163

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
           +DV +   L+++Y KC  +D A +VF++   +  + W+ ++ A  R +RW + +EL   M
Sbjct: 164 VDVHLSCALINLYEKCLGIDRANQVFDETPLQEDFLWNTIVMANLRSERWEDALELSRRM 223

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
                   D    K+LQACG       GK +H  VI+ G      + NS++++Y +  +L
Sbjct: 224 QSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRL 283

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             AR  F+S ++ +  +WNS+IS                                   SY
Sbjct: 284 ELARAVFDSTEDHNLASWNSIIS-----------------------------------SY 308

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
              G  + A ++ + MES  I PD+ TW  ++SG    G     L   + +   G  P+ 
Sbjct: 309 AVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDS 368

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            +ITSA+ A  +L    +G EIH   ++     DV V  SL++MY K + LE AE VF  
Sbjct: 369 CSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHH 428

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
            K+K++ +WNS+I+GY   G    A +L I+M+E  +  +++TWN L+SGY  +G  +EA
Sbjct: 429 TKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEA 488

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
           + +  R+ K+  +  N  SW ++I+G  Q     +AL  F +MQ     PN  TI ++L 
Sbjct: 489 LAVINRI-KSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLR 547

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT 568
           ACA      K +EIH   ++      + +  +LID Y+K G +  +  +F  +  K +  
Sbjct: 548 ACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPC 607

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT 628
           WN ++ GY ++G       LFD M   G++P+  TF +++     +G+V  G K F S+ 
Sbjct: 608 WNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMK 667

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
             Y I P IEHYS M+DL G++G L+EA++FI  MP + D+SIW A+L ACR+H +I +A
Sbjct: 668 TDYSINPTIEHYSCMVDLLGKAGFLDEALDFIHAMPQKADASIWGAVLAACRLHKDIKIA 727

Query: 689 VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL 748
            +A   LF LEP +     L++ IY+   +  D  ++++       +      WI+V+  
Sbjct: 728 EIAARNLFRLEPYNSANYVLMMNIYSTFERWGDVERLKESMTAMGVKIPNVWSWIQVRQT 787

Query: 749 VYTFVTGGWS-----ESYSDL--LYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSE 801
           ++ F T G S     E Y DL  L S ++ +         H    I++ EKE++   H+E
Sbjct: 788 IHVFSTEGKSHPEEGEIYFDLYQLISEIKKLGYVPDTNCVHQN--IDDSEKEKVLLSHTE 845

Query: 802 KLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQ 861
           KLA+ + L+   +    IR+VKN R+C  CH  AKY+S+  + EIFL D    HHF NG+
Sbjct: 846 KLAMTYGLM-KIKGGTPIRVVKNTRICQDCHTAAKYISLARNREIFLRDGGRFHHFMNGE 904

Query: 862 CSCGDYW 868
           CSC D W
Sbjct: 905 CSCNDRW 911


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 285/884 (32%), Positives = 451/884 (51%), Gaps = 81/884 (9%)

Query: 59   TYINLLQACIDSN-SIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
            T+  +L+AC+  + + +  +++H+       +    V   L+ +Y+K G ++ A++VF  
Sbjct: 161  TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220

Query: 117  MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
            +  +++ TW AMI   S++    E + LF  M    +FP  ++   +L A      FE G
Sbjct: 221  ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280

Query: 177  KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
            + +H LVIK G      V N ++A+Y +  KLI A R F +M+ +DGV++NS+ISG  Q 
Sbjct: 281  EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 237  GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT- 295
            G +D A  LF KM R+ +K   +T   L+ +   +G     M++       G++ D+   
Sbjct: 341  GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE 400

Query: 296  ------------------------------WTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
                                          W  M+  + Q    S + ++F++M   G++
Sbjct: 401  GSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI 460

Query: 326  PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
            PN  T  S +  CT L AL +G +IH+  +K GF  +V V + LI+MY+K  +L  A R+
Sbjct: 461  PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520

Query: 386  FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------- 432
               + + DV SW +MIAGY Q     +A +LF +M+   +  + I +             
Sbjct: 521  LRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRAL 580

Query: 433  ----------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
                                  N LIS Y + G   EA   F+++G      +N  SWNS
Sbjct: 581  RQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGD-----KNNISWNS 635

Query: 471  LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
            L++G  Q G    AL VF +M  +    N  T  S + A A L    + ++IH  VL+  
Sbjct: 636  LVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTG 695

Query: 531  LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
             +S   V NSLI  YAKSG+I  +   F+ MS +++I+WN++I GY  HG    AL LF+
Sbjct: 696  YDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFE 755

Query: 591  QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
            +MK  G+ PN  TF+ ++ A S  G+V  G   F S+ + + ++P  EHY  ++DL GR+
Sbjct: 756  EMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRA 815

Query: 651  GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
            G+L+ AME+I++MPI  D+ IW  LL+AC IH NI++   A   L +LEP D     LI 
Sbjct: 816  GQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLIS 875

Query: 711  QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ 770
             IYA+  +       RKL ++   +   G+ WIEVKN V+ F  G      ++ +Y ++ 
Sbjct: 876  NIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIG 935

Query: 771  NVPENVT----ARSSHSGLCIEEE-EKEEISGIHSEKLALAFALIG-SSQAPHTIRIVKN 824
            ++    +     + S S L   E+ +K+ I+ +HSEKLA+AF L+   +  P  IR++KN
Sbjct: 936  HLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIP--IRVMKN 993

Query: 825  IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +R+C  CH   KYVS + +  I + D+   HHF  G CSC D+W
Sbjct: 994  LRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 184/719 (25%), Positives = 327/719 (45%), Gaps = 93/719 (12%)

Query: 42  ITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSV 100
           I +++ +  +G +     Y+ LL+ C+ S S+    +LH  ++    + +  +   L+  
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 101 YAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLF 160
           Y + G    A +VF++   R++++W+ MI  +   +   +V  LF  M+ +G+ P+ + F
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 161 PKILQAC-GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
             +L+AC G    F   K +HS     G      V N ++ +Y K G +  A++ F  + 
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI--------------------KLGVV 259
            KD V W +MISG  Q G  +EA  LF  M   EI                    +LG  
Sbjct: 223 MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQ 282

Query: 260 TFNILIR--SYNQLGQCDVAMEMVKRMESLGITPDVF---------TWTCMISGFAQNGR 308
              ++I+   +++   C+  + +  R   L     +F         ++  +ISG  Q G 
Sbjct: 283 LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
           + +AL+LF +M    + P+ +T+ S +SAC  + AL  GM++HS A+K G + D+++  S
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGS 402

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           L+++YSKC ++E A + F   + +++  WN M+  Y Q      ++E+F +MQ   + PN
Sbjct: 403 LLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPN 462

Query: 429 VITW-----------------------------------NVLISGYIQNGNEDEAVDLFQ 453
             T+                                   +VLI  Y + G    A+ + +
Sbjct: 463 QFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILR 522

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
           R+ ++D V     SW ++IAGY Q    + AL +F +M+      + +   S + ACA +
Sbjct: 523 RLPEDDVV-----SWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGI 577

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
            A  + ++IH         + L + N+LI  YA+ G I  +   F+ +  K+ I+WNSL+
Sbjct: 578 RALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLV 637

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
            G    G++  AL +F +M     + N  T+          G          +I +  QI
Sbjct: 638 SGLAQSGYFEEALQVFVRMLRTEAEVNMFTY----------GSAISAAASLANIKQGQQI 687

Query: 634 IPMI---------EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
             M+         E  +++I LY +SG + +A     DM  E +   W A++T    HG
Sbjct: 688 HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS-ERNVISWNAMITGYSQHG 745



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 206/439 (46%), Gaps = 43/439 (9%)

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK-ALAMGMEIH 351
           VF+W  MI  F       Q   LF+ M   G+ PNG T    + AC     A     ++H
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVH 183

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           S     GF    LV N LI++YSK   +E+A++VF+ I  KD+ +W +MI+G  Q G   
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEE 243

Query: 412 KAYELFIKMQESDVPPN--------------------------VITWNVLISGYIQNGNE 445
           +A  LF  M  S++ P                           VI W      Y+ NG  
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNG-- 301

Query: 446 DEAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
              V L+ R  K        +    R+  S+NSLI+G  Q G  + AL +F KMQ  C  
Sbjct: 302 --LVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLK 359

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P+C+T+ S+L ACA + A +K  ++H   ++  + + + +  SL+D Y+K  ++  +   
Sbjct: 360 PDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKF 419

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           F    +++I+ WN ++  Y        + ++F QM+  G+ PN+ T+ SI+   +  G +
Sbjct: 420 FLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGAL 479

Query: 618 DLGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
            LG+++   + +  +Q+   +   S +ID+Y + G+L  A+  +  +P E D   W A++
Sbjct: 480 YLGEQIHTHVIKTGFQLNVYV--CSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMI 536

Query: 677 TACRIHGNIDLAVLAIERL 695
                H     A+   E +
Sbjct: 537 AGYVQHDMFSEALQLFEEM 555



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 181/413 (43%), Gaps = 46/413 (11%)

Query: 310 SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL 369
           S+ + L   M   GV  N       +  C    +L   M +H    K GF  + L+ +SL
Sbjct: 40  SKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSL 99

Query: 370 INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           ++ Y +  +   A +VFD   ++ V+SWN MI  +       + + LF +M    + PN 
Sbjct: 100 VDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNG 159

Query: 430 ITW------------------------------------NVLISGYIQNGNEDEAVDLFQ 453
            T+                                    N+LI  Y +NG  + A  +F 
Sbjct: 160 YTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFN 219

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
            +   D V     +W ++I+G  Q G +  A+ +F  M +S  +P    + SVL A   +
Sbjct: 220 CICMKDIV-----TWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKI 274

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
                 +++H  V++    S   V N L+  Y++S  ++ +  IF  M+S+D +++NSLI
Sbjct: 275 QLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLI 334

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
            G V  GF   AL+LF +M+   LKP+  T  S++ A +  G +  G ++     +    
Sbjct: 335 SGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMS 394

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
             +I    +++DLY +   +E A +F      E +  +W  +L A   +G +D
Sbjct: 395 ADIILE-GSLLDLYSKCADVETAHKFFLTTETE-NIVLWNVMLVA---YGQLD 442



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 45/213 (21%), Positives = 97/213 (45%), Gaps = 7/213 (3%)

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
           K+  + +   M+      N    L +L  C    +  +   +H  + +   +    +++S
Sbjct: 39  KSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDS 98

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           L+D Y + G+   +  +FD  S++ + +WN +I  +V          LF +M + G+ PN
Sbjct: 99  LVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPN 158

Query: 601 RGTFLSIILAHSLAGMVDLG--KKVFC-SITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
             TF  ++ A  + G +     K+V   +    +   P++   + +IDLY ++G +E A 
Sbjct: 159 GYTFAGVLKA-CVGGDIAFNYVKQVHSRTFYYGFDSSPLVA--NLLIDLYSKNGYIESAK 215

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
           +    + ++ D   W A+++    +G  + A+L
Sbjct: 216 KVFNCICMK-DIVTWVAMISGLSQNGLEEEAIL 247


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 287/897 (31%), Positives = 452/897 (50%), Gaps = 79/897 (8%)

Query: 46  DSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID-VFVKTKLLSVYAK 103
           D + T      +  Y   L+ C    ++   ++LHA FL     +D VF+ TK + +Y K
Sbjct: 35  DPLPTTTRFPLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGK 94

Query: 104 CGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKI 163
           CG   DA +VF+ M ER ++TW+AMIGA     R+ E +EL+  M   G+  D F FP +
Sbjct: 95  CGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCV 154

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES--MDEK 221
           L+ACG   +   G  +H + +K G      V N+++A+Y KCG L  AR  F+S  M++ 
Sbjct: 155 LKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKD 214

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------------------- 261
           D V+WNS+IS +   GE+ EA  LF +M    ++    TF                    
Sbjct: 215 DPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIH 274

Query: 262 ---------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN 306
                          N LI  Y   GQ + A  + K M    +  D  +W  ++SG  QN
Sbjct: 275 AVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSM----LFKDCVSWNTLLSGMVQN 330

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
              S A++ F++M   G  P+ V++ + I+A      L  GME+H+ A+K G   ++ +G
Sbjct: 331 DMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIG 390

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ--ESD 424
           NSLI+MY KC  ++     F+ + +KD+ SW ++IAGY Q      A  L  K+Q  + D
Sbjct: 391 NSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMD 450

Query: 425 VPPNVITWNVL-------------ISGYIQNGN------EDEAVDLFQRMGKNDKVK--- 462
           V P +I   +L             I GY+  G       ++  V+++  +   D  +   
Sbjct: 451 VDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVF 510

Query: 463 -----RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASN 517
                ++  SW S+I      G    AL +F  +  +   P+ +T++SVL A A L +  
Sbjct: 511 ESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLK 570

Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
           K KEIHG ++R+       + NSL+D YA+ G +  +R IF+ +  +D+I W S+I    
Sbjct: 571 KGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANG 630

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
           +HG    A+DLF +M    + P+  TFL+++ A S +G+V  GK+ F  +   Y++ P  
Sbjct: 631 MHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWP 690

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
           EHY+ ++DL  RS  LEEA  F+ +MPIEP + +W ALL ACRIH N DL  +A ++L  
Sbjct: 691 EHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQ 750

Query: 698 LEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGW 757
           L   +     L+   +A  G+  D  +VR + + N  +   G  WIEV+N ++TF+    
Sbjct: 751 LNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDK 810

Query: 758 SESYSDLLYSWLQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLALAFALIG 811
           S    + +Y  L    + +  +  +          + EEEK ++   HSE+LAL + L+ 
Sbjct: 811 SHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLV 870

Query: 812 SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +S+    +RI KN+R+C  CH   K  S +    + + D+   HHF+ G CSCGD+W
Sbjct: 871 TSKGT-CLRITKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 138/535 (25%), Positives = 250/535 (46%), Gaps = 48/535 (8%)

Query: 14  SLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSI 73
           S L +K +P   ++ +    G G   EA+++   +   G +    T+++ LQAC     I
Sbjct: 208 SGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFI 267

Query: 74  HLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIG 130
            + R +HA +   N  T  DV+V   L+++YA CG ++DA  VF+ M  ++  +W+ ++ 
Sbjct: 268 KIGRGIHAVILKSNHFT--DVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLS 325

Query: 131 AYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSC 190
              ++  + + +  F  M   G  PD      ++ A G   +  AG  +H+  IK G+  
Sbjct: 326 GMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDS 385

Query: 191 VRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC 250
              + NS++ +Y KC  + +    FE M EKD ++W ++I+GY Q   + +A  L  K+ 
Sbjct: 386 NMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQ 445

Query: 251 REEIKL----------------------------------GVVTFNILIRSYNQLGQCDV 276
            E++ +                                   ++  N ++  Y +L   D 
Sbjct: 446 LEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDY 505

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
           A  + + + S     D+ +WT MI+    NG   +AL+LF  +    + P+ +T+ S + 
Sbjct: 506 ARHVFESINS----KDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLY 561

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           A   L +L  G EIH   ++ GF  + L+ NSL++MY++C  +E A  +F+ +K +D+  
Sbjct: 562 AAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLIL 621

Query: 397 WNSMIAGYCQAGYCGK-AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           W SMI      G CGK A +LF KM + +V P+ IT+  L+     +G   E    F+ M
Sbjct: 622 WTSMINANGMHG-CGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIM 680

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               K++     +  L+     L + N+    +  +++    P+     ++L AC
Sbjct: 681 KNEYKLEPWPEHYACLV---DLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGAC 732


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 285/884 (32%), Positives = 451/884 (51%), Gaps = 81/884 (9%)

Query: 59   TYINLLQACIDSN-SIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
            T+  +L+AC+  + + +  +++H+       +    V   L+ +Y+K G ++ A++VF  
Sbjct: 161  TFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNC 220

Query: 117  MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
            +  +++ TW AMI   S++    E + LF  M    +FP  ++   +L A      FE G
Sbjct: 221  ICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELG 280

Query: 177  KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
            + +H LVIK G      V N ++A+Y +  KLI A R F +M+ +DGV++NS+ISG  Q 
Sbjct: 281  EQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQ 340

Query: 237  GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT- 295
            G +D A  LF KM R+ +K   +T   L+ +   +G     M++       G++ D+   
Sbjct: 341  GFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILE 400

Query: 296  ------------------------------WTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
                                          W  M+  + Q    S + ++F++M   G++
Sbjct: 401  GSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMI 460

Query: 326  PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
            PN  T  S +  CT L AL +G +IH+  +K GF  +V V + LI+MY+K  +L  A R+
Sbjct: 461  PNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRI 520

Query: 386  FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------- 432
               + + DV SW +MIAGY Q     +A +LF +M+   +  + I +             
Sbjct: 521  LRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRAL 580

Query: 433  ----------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
                                  N LIS Y + G   EA   F+++G      +N  SWNS
Sbjct: 581  RQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGD-----KNNISWNS 635

Query: 471  LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
            L++G  Q G    AL VF +M  +    N  T  S + A A L    + ++IH  VL+  
Sbjct: 636  LVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTG 695

Query: 531  LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
             +S   V NSLI  YAKSG+I  +   F+ MS +++I+WN++I GY  HG    AL LF+
Sbjct: 696  YDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFE 755

Query: 591  QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
            +MK  G+ PN  TF+ ++ A S  G+V  G   F S+ + + ++P  EHY  ++DL GR+
Sbjct: 756  EMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRA 815

Query: 651  GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
            G+L+ AME+I++MPI  D+ IW  LL+AC IH NI++   A   L +LEP D     LI 
Sbjct: 816  GQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLIS 875

Query: 711  QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ 770
             IYA+  +       RKL ++   +   G+ WIEVKN V+ F  G      ++ +Y ++ 
Sbjct: 876  NIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIG 935

Query: 771  NVPENVT----ARSSHSGLCIEEE-EKEEISGIHSEKLALAFALIG-SSQAPHTIRIVKN 824
            ++    +     + S S L   E+ +K+ I+ +HSEKLA+AF L+   +  P  IR++KN
Sbjct: 936  HLNRRTSEIGYVQDSFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIP--IRVMKN 993

Query: 825  IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +R+C  CH   KYVS + +  I + D+   HHF  G CSC D+W
Sbjct: 994  LRVCNDCHNWIKYVSKISNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 184/719 (25%), Positives = 327/719 (45%), Gaps = 93/719 (12%)

Query: 42  ITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSV 100
           I +++ +  +G +     Y+ LL+ C+ S S+    +LH  ++    + +  +   L+  
Sbjct: 43  IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102

Query: 101 YAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLF 160
           Y + G    A +VF++   R++++W+ MI  +   +   +V  LF  M+ +G+ P+ + F
Sbjct: 103 YFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTF 162

Query: 161 PKILQAC-GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
             +L+AC G    F   K +HS     G      V N ++ +Y K G +  A++ F  + 
Sbjct: 163 AGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCIC 222

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI--------------------KLGVV 259
            KD V W +MISG  Q G  +EA  LF  M   EI                    +LG  
Sbjct: 223 MKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQ 282

Query: 260 TFNILIR--SYNQLGQCDVAMEMVKRMESLGITPDVF---------TWTCMISGFAQNGR 308
              ++I+   +++   C+  + +  R   L     +F         ++  +ISG  Q G 
Sbjct: 283 LHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGF 342

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
           + +AL+LF +M    + P+ +T+ S +SAC  + AL  GM++HS A+K G + D+++  S
Sbjct: 343 SDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGS 402

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           L+++YSKC ++E A + F   + +++  WN M+  Y Q      ++E+F +MQ   + PN
Sbjct: 403 LLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPN 462

Query: 429 VITW-----------------------------------NVLISGYIQNGNEDEAVDLFQ 453
             T+                                   +VLI  Y + G    A+ + +
Sbjct: 463 QFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILR 522

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
           R+ ++D V     SW ++IAGY Q    + AL +F +M+      + +   S + ACA +
Sbjct: 523 RLPEDDVV-----SWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGI 577

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
            A  + ++IH         + L + N+LI  YA+ G I  +   F+ +  K+ I+WNSL+
Sbjct: 578 RALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLV 637

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
            G    G++  AL +F +M     + N  T+          G          +I +  QI
Sbjct: 638 SGLAQSGYFEEALQVFVRMLRTEAEVNMFTY----------GSAISAAASLANIKQGQQI 687

Query: 634 IPMI---------EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
             M+         E  +++I LY +SG + +A     DM  E +   W A++T    HG
Sbjct: 688 HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS-ERNVISWNAMITGYSQHG 745



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 206/439 (46%), Gaps = 43/439 (9%)

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK-ALAMGMEIH 351
           VF+W  MI  F       Q   LF+ M   G+ PNG T    + AC     A     ++H
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVH 183

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           S     GF    LV N LI++YSK   +E+A++VF+ I  KD+ +W +MI+G  Q G   
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEE 243

Query: 412 KAYELFIKMQESDVPPN--------------------------VITWNVLISGYIQNGNE 445
           +A  LF  M  S++ P                           VI W      Y+ NG  
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNG-- 301

Query: 446 DEAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
              V L+ R  K        +    R+  S+NSLI+G  Q G  + AL +F KMQ  C  
Sbjct: 302 --LVALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLK 359

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P+C+T+ S+L ACA + A +K  ++H   ++  + + + +  SL+D Y+K  ++  +   
Sbjct: 360 PDCITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKF 419

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           F    +++I+ WN ++  Y        + ++F QM+  G+ PN+ T+ SI+   +  G +
Sbjct: 420 FLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGAL 479

Query: 618 DLGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
            LG+++   + +  +Q+   +   S +ID+Y + G+L  A+  +  +P E D   W A++
Sbjct: 480 YLGEQIHTHVIKTGFQLNVYV--CSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMI 536

Query: 677 TACRIHGNIDLAVLAIERL 695
                H     A+   E +
Sbjct: 537 AGYVQHDMFSEALQLFEEM 555



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 181/413 (43%), Gaps = 46/413 (11%)

Query: 310 SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL 369
           S+ + L   M   GV  N       +  C    +L   M +H    K GF  + L+ +SL
Sbjct: 40  SKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSL 99

Query: 370 INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           ++ Y +  +   A +VFD   ++ V+SWN MI  +       + + LF +M    + PN 
Sbjct: 100 VDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNG 159

Query: 430 ITW------------------------------------NVLISGYIQNGNEDEAVDLFQ 453
            T+                                    N+LI  Y +NG  + A  +F 
Sbjct: 160 YTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFN 219

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
            +   D V     +W ++I+G  Q G +  A+ +F  M +S  +P    + SVL A   +
Sbjct: 220 CICMKDIV-----TWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKI 274

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
                 +++H  V++    S   V N L+  Y++S  ++ +  IF  M+S+D +++NSLI
Sbjct: 275 QLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLI 334

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
            G V  GF   AL+LF +M+   LKP+  T  S++ A +  G +  G ++     +    
Sbjct: 335 SGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMS 394

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
             +I    +++DLY +   +E A +F      E +  +W  +L A   +G +D
Sbjct: 395 ADIILE-GSLLDLYSKCADVETAHKFFLXTETE-NIVLWNVMLVA---YGQLD 442



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 45/213 (21%), Positives = 97/213 (45%), Gaps = 7/213 (3%)

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
           K+  + +   M+      N    L +L  C    +  +   +H  + +   +    +++S
Sbjct: 39  KSKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDS 98

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           L+D Y + G+   +  +FD  S++ + +WN +I  +V          LF +M + G+ PN
Sbjct: 99  LVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPN 158

Query: 601 RGTFLSIILAHSLAGMVDLG--KKVFC-SITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
             TF  ++ A  + G +     K+V   +    +   P++   + +IDLY ++G +E A 
Sbjct: 159 GYTFAGVLKA-CVGGDIAFNYVKQVHSRTFYYGFDSSPLVA--NLLIDLYSKNGYIESAK 215

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
           +    + ++ D   W A+++    +G  + A+L
Sbjct: 216 KVFNCICMK-DIVTWVAMISGLSQNGLEEEAIL 247


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 280/844 (33%), Positives = 436/844 (51%), Gaps = 84/844 (9%)

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +Y KCG + DA  +F+ M ER+++TW+AM+G Y  +      +E++  M   G+  D + 
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           FP +L+ACG   D   G  +H L IK G      V NS++A+Y KC  +  AR+ F+ M 
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120

Query: 220 EK-DGVAWNSMISGYFQIGENDEAHRLFDKM------------------CREE--IKLG- 257
            + D V+WNS+IS Y   G   EA  LF +M                  C +   IKLG 
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180

Query: 258 --------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
                         V   N L+  Y + G+   A  +   +E      D+ TW  M++GF
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEG----KDIVTWNSMLTGF 236

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
            QNG  S+AL+ F ++    + P+ V+I S I A   L  L  G EIH+ A+K GF  ++
Sbjct: 237 IQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNI 296

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF--IKMQ 421
           LVGN+LI+MY+KC  +    R FD++  KD+ SW +  AGY Q     +A EL   ++M+
Sbjct: 297 LVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQME 356

Query: 422 ESDVPPNVITWNVL-------------ISGYIQNGN------EDEAVDLFQRMGKNDKVK 462
             DV   +I   +L             I GY   G       ++  +D++   G  D   
Sbjct: 357 GMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAV 416

Query: 463 R--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV 514
           R        +  SW S+I+ Y   G  N AL VF  M+ +   P+ VT++S+L A   L 
Sbjct: 417 RIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLS 476

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
              K KEIHG ++R+       + N+L+D YA+ G++  +  IF    ++++I W ++I 
Sbjct: 477 TLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMIS 536

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQI 633
            Y +HG+  AA++LF +MK   + P+  TFL+++ A S +G+V+ GK  F  I +C YQ+
Sbjct: 537 AYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKS-FLEIMKCEYQL 595

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
            P  EHY+ ++DL GR   LEEA + ++ M  EP   +W ALL ACRIH N ++  +A E
Sbjct: 596 EPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAE 655

Query: 694 RLFDLE---PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVY 750
           +L +L+   PG+ +   L+  ++A  G+ +D  +VR   + +    + G  WIEV N ++
Sbjct: 656 KLLELDLDNPGNYV---LVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIH 712

Query: 751 TFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLA 804
            F++        D +Y  L  V E +     +          + EEEK ++   HSE+LA
Sbjct: 713 AFLSRDKLHPECDKIYQKLAQVTEKLKREGGYVAQTKFVLHNVGEEEKVQMLYGHSERLA 772

Query: 805 LAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
           +A+ L+ +++    IR+ KN+R+C  CH     VS     E+ + D+   HHFK+G CSC
Sbjct: 773 IAYGLLATAEGT-PIRVTKNLRVCGDCHSFCTLVSRFFERELIVRDASRFHHFKDGMCSC 831

Query: 865 GDYW 868
           GD+W
Sbjct: 832 GDFW 835



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 150/542 (27%), Positives = 257/542 (47%), Gaps = 66/542 (12%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG    A+ +   +   G      T+  LL+AC     +    ++H   +    +  VFV
Sbjct: 36  NGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFV 95

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERN-LYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              L+++YAKC  ++ AR++F+ M  RN + +W+++I AYS +    E + LF  M++ G
Sbjct: 96  VNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAG 155

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           +  + + F   LQAC +    + G  +H+ ++K G      V N+++A+YV+ GK+  A 
Sbjct: 156 VVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAA 215

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
             F +++ KD V WNSM++G+ Q G   EA   F  +   ++K   V+   +I +  +LG
Sbjct: 216 VIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLG 275

Query: 273 --------------------------------QCDVAMEMVKRMESLGITPDVFTWTCMI 300
                                           +C   M    R   L    D+ +WT   
Sbjct: 276 YLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKC-CCMSYGGRAFDLMAHKDLISWTTAA 334

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +G+AQN    QAL+L +++   G+  +   I S + AC  L  L    EIH   ++ G +
Sbjct: 335 AGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS 394

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
           D VL  N++I++Y +C  ++ A R+F+ I+ KDV SW SMI+ Y   G   KA E+F  M
Sbjct: 395 DPVL-QNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSM 453

Query: 421 QESDVPPNVITWNVLIS---------------------GYIQNGN-EDEAVDLFQRMGK- 457
           +E+ + P+ +T   ++S                     G+I  G+  +  VD++ R G  
Sbjct: 454 KETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSV 513

Query: 458 NDKVK-------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            D  K       RN   W ++I+ Y   G    A+ +F +M+     P+ +T L++L AC
Sbjct: 514 EDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYAC 573

Query: 511 AY 512
           ++
Sbjct: 574 SH 575



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 159/607 (26%), Positives = 271/607 (44%), Gaps = 80/607 (13%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVF 92
           GNG   EA+ +   +   G      T+   LQAC DS+ I L  ++HA  L     +DV+
Sbjct: 137 GNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVY 196

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V   L+++Y + G + +A  +F ++  +++ TW++M+  + ++  + E +E F+ +    
Sbjct: 197 VANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNAD 256

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           L PD      I+ A G  G    GK +H+  IK G      V N+++ +Y KC  + +  
Sbjct: 257 LKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGG 316

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------CREEI 254
           R F+ M  KD ++W +  +GY Q     +A  L  ++                  CR   
Sbjct: 317 RAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLN 376

Query: 255 KLG----------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
            LG                 V  N +I  Y + G  D A+ + + +E      DV +WT 
Sbjct: 377 CLGKIKEIHGYTIRGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIE----CKDVVSWTS 432

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           MIS +  NG  ++AL++F  M   G+ P+ VT+ S +SA   L  L  G EIH   ++ G
Sbjct: 433 MISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKG 492

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
           F  +  + N+L++MY++C  +E A ++F   K++++  W +MI+ Y   GY   A ELF+
Sbjct: 493 FILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFM 552

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
           +M++  + P+ IT+  L+     +G  +E     + M    +++     +  L+     L
Sbjct: 553 RMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLV---DLL 609

Query: 479 GQKN---NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
           G++N    A  + + MQ+    P      ++L AC   + SN  KEI      + LE  L
Sbjct: 610 GRRNCLEEAYQIVKSMQNE---PTPEVWCALLGACR--IHSN--KEIGEVAAEKLLELDL 662

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
                        GN V    +F                    +G W    ++  +MK  
Sbjct: 663 D----------NPGNYVLVSNVF------------------AANGRWKDVEEVRMRMKGS 694

Query: 596 GLKPNRG 602
           GL  N G
Sbjct: 695 GLTKNPG 701


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 255/788 (32%), Positives = 406/788 (51%), Gaps = 89/788 (11%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           +VF    LLS+YAK G L DAR VF +M ER+  +W+ M+   +R  R+ E +++F  MV
Sbjct: 95  NVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMV 154

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            DGL P  F    +L +C        G+ +HS V+KLG+S    V NSVL +Y KCG   
Sbjct: 155 TDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCG--- 211

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
                                       + + A  +F++M    +     ++N ++    
Sbjct: 212 ----------------------------DAETARAVFERMPERSVS----SWNAMVSLDA 239

Query: 270 QLGQCDVAMEMVKRMESLGITPD--VFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMP 326
            LG+ D+A+ + + M      PD  + +W  +I+G+ QNG  ++AL  F  M S+  + P
Sbjct: 240 HLGRMDLALSLFENM------PDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAP 293

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           +  TITS +SAC +L  +++G ++H+  ++        V N+LI+MY+K   +E A  V 
Sbjct: 294 DEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALISMYAKSGSVENARGVM 353

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
                 D+                                 NVI++  L+ GY++ G+  
Sbjct: 354 QQAVMADL---------------------------------NVISFTALLEGYVKLGDMK 380

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
            A ++F  M   D V     +W ++I GY+Q G  + A+ +FR M  S   PN  T+ +V
Sbjct: 381 HAREMFDVMSNRDVV-----AWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAV 435

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKD 565
           L  CA L      K+IH   +R   E S  V NS++  YA+SG++ ++R +FD +   K+
Sbjct: 436 LSVCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKE 495

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
            +TW S+I     HG    A+ LF++M   G+KP+R TF+ ++ A +  G VD GK+ F 
Sbjct: 496 TVTWTSMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQ 555

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
            + + + I+P + HY+ M+DL  R+G   EA EFI+ MP+EPD+  W +LL+ACR+H N 
Sbjct: 556 QLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNA 615

Query: 686 DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV 745
           DLA LA E+L  ++PG+      +  +Y+ CG+  DA K+ K  ++ + +   G  W  +
Sbjct: 616 DLAELAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHI 675

Query: 746 KNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHS 800
            N V+ F          D +Y     + +++        L      +++E KEE+   HS
Sbjct: 676 GNRVHVFGADDVLHPQRDTVYRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHS 735

Query: 801 EKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNG 860
           EKLA+AF L+ + +   T+RI+KN+R+C  CH   K++S +   EI L D+   HHFK+G
Sbjct: 736 EKLAIAFGLVSTPEKT-TLRIMKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDG 794

Query: 861 QCSCGDYW 868
            CSC DYW
Sbjct: 795 FCSCKDYW 802



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 138/537 (25%), Positives = 222/537 (41%), Gaps = 103/537 (19%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           GR  EAI +   + T G    + T  N+L +C  + +  + RK+H+F+  L     V V 
Sbjct: 141 GRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVA 200

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAM-------------------------- 128
             +L++Y KCG  + AR VFE M ER++ +W+AM                          
Sbjct: 201 NSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIV 260

Query: 129 -----IGAYSRDQRWREVVELFFLMVQ-DGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
                I  Y+++    + +  F  M+    + PD+F    +L AC N G    GK +H+ 
Sbjct: 261 SWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAY 320

Query: 183 VIKLGMSCVRRVRNSVLAV---------------------------------YVKCGKLI 209
           +++  M  + +V N+++++                                 YVK G + 
Sbjct: 321 ILRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMK 380

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL----- 264
            AR  F+ M  +D VAW +MI GY Q G NDEA  LF  M R   +    T   +     
Sbjct: 381 HAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCA 440

Query: 265 ---------------IRSYNQLGQ--CDVAMEMVKRMESLGITPDVF----------TWT 297
                          IRS  +      +  + M  R  SL     VF          TWT
Sbjct: 441 SLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWT 500

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVK 356
            MI   AQ+G    A+ LF+EM  VGV P+ +T    +SACT +  +  G      L  K
Sbjct: 501 SMIVALAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDK 560

Query: 357 MGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
            G   ++     ++++ ++     EA E +  M  + D  +W S+++  C+        E
Sbjct: 561 HGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSA-CRVHKNADLAE 619

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SWNSL 471
           L  +   S  P N   ++ L + Y   G  ++A  +++R  K+  VK+ T  SW  +
Sbjct: 620 LAAEKLLSIDPGNSGAYSALSNVYSACGRWNDAAKIWKRR-KDKSVKKETGFSWTHI 675



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 153/359 (42%), Gaps = 82/359 (22%)

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE-----LEAAERVFDMIK-- 390
           C        G  IH+ AVK G      + N+L++ Y+            A R+FD I   
Sbjct: 33  CQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEIPAA 92

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
            ++V++WNS+++ Y ++G    A  +F +M E D     ++W V++ G            
Sbjct: 93  QRNVFTWNSLLSLYAKSGRLADARAVFAEMPERD----PVSWTVMVVG------------ 136

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                                     ++G+   A+ +F  M +    P   T+ +VL +C
Sbjct: 137 ------------------------LNRVGRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSC 172

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR--------------- 555
           A   A    +++H  V++  L S +PV NS+++ Y K G+   +R               
Sbjct: 173 AATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAVFERMPERSVSSWN 232

Query: 556 ----------------TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG-LK 598
                           ++F+ M  + I++WN++I GY  +G    AL  F +M S+  + 
Sbjct: 233 AMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKALWFFSRMLSYSTMA 292

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS-AMIDLYGRSGKLEEA 656
           P+  T  S++ A +  GMV +GK+V   I      +P I   + A+I +Y +SG +E A
Sbjct: 293 PDEFTITSVLSACANLGMVSIGKQVHAYILRSR--MPYIGQVTNALISMYAKSGSVENA 349


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 280/884 (31%), Positives = 452/884 (51%), Gaps = 77/884 (8%)

Query: 56  RRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVF 114
           R+  + ++ +A   + +     KLH+ +  L     V    KL++ YA      D    F
Sbjct: 12  RQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAH---FRDPTSSF 68

Query: 115 EDMR----ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
              R      N+Y W+++I A + +  + E + L+    +  L PD + FP ++ AC   
Sbjct: 69  SVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGL 128

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
            DFE  K +H  V+ +G      + N+++ +Y +   L  AR+ FE M  +D V+WNS+I
Sbjct: 129 LDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLI 188

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT 290
           SGY   G  +EA  ++ +     +     T + ++R+   LG  +    +   +E +GI 
Sbjct: 189 SGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIK 248

Query: 291 PDVF-------------------------------TWTCMISGFAQNGRTSQALDLFKEM 319
            DV                                +W  MI G++Q G   +++ LF EM
Sbjct: 249 KDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEM 308

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
                 P+ +TITS + AC  L  L  G  +H   +  G+  D    N LINMY+KC  L
Sbjct: 309 -VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNL 367

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
            A++ VF  +K KD  SWNSMI  Y Q G   +A +LF KM ++DV P+ +T+ +L+S  
Sbjct: 368 LASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMS 426

Query: 440 IQNGN----------------------EDEAVDLFQRMGK-NDKVK-------RNTASWN 469
            Q G+                       +  VD++ + G+  D +K       R+  +WN
Sbjct: 427 TQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWN 486

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           ++IA        N  L +  +M++    P+  T+LS+LP C+ L A  + KEIHGC+ + 
Sbjct: 487 TIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKL 546

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            LES +PV N LI+ Y+K G++  S  +F  M +KD++TW +LI    ++G    A+  F
Sbjct: 547 GLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAF 606

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            +M++ G+ P+   F++II A S +G+V+ G   F  + + Y+I P IEHY+ ++DL  R
Sbjct: 607 GEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSR 666

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           S  L++A +FI  MP++PDSSIW ALL+ACR+ G+ ++A    ER+ +L P D     L+
Sbjct: 667 SALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLV 726

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG-GWSESYSDL--LY 766
             IYA  GK +    +RK  +    +   G  W+E++N VY F TG  + E + ++  L 
Sbjct: 727 SNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLL 786

Query: 767 SWLQNV--PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
             L  +   E   A        I+E+EK +I   HSE+LA+AF L+ +++    ++++KN
Sbjct: 787 GMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLL-NTKPGTPLQVMKN 845

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +R+C  CH   KY+S +   E+ + D+   H FK+G CSCGDYW
Sbjct: 846 LRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/461 (31%), Positives = 224/461 (48%), Gaps = 34/461 (7%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVF 92
            NG  NEA+ +       G      T  ++L+AC    S+     +H  +  +  + DV 
Sbjct: 193 ANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVI 252

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V   LLS+Y K   L D R +F+ M  R+  +W+ MI  YS+   + E ++LF  MV   
Sbjct: 253 VNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ- 311

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             PD      ILQACG+ GD E GK +H  +I  G  C     N ++ +Y KCG L+ ++
Sbjct: 312 FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQ 371

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
             F  M  KD V+WNSMI+ Y Q G  DEA +LF KM + ++K   VT+ +L+    QLG
Sbjct: 372 EVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVKPDSVTYVMLLSMSTQLG 430

Query: 273 --------QCDVA--------------MEMVKRMESLGITPDVF---------TWTCMIS 301
                    CD+A              ++M  +   +G +  VF         TW  +I+
Sbjct: 431 DLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIA 490

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
               +   +  L +   M   GV P+  T+ S +  C+ L A   G EIH    K+G   
Sbjct: 491 SCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLES 550

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           DV VGN LI MYSKC  L  + +VF ++K KDV +W ++I+     G   KA   F +M+
Sbjct: 551 DVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEME 610

Query: 422 ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
            + + P+ + +  +I     +G  +E ++ F RM K+ K++
Sbjct: 611 AAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIE 651


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 267/795 (33%), Positives = 400/795 (50%), Gaps = 87/795 (10%)

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           + G   D   + K+ Q C    D   GK +   +I+ G        N+++ +Y  CG + 
Sbjct: 50  EGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVT 109

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------- 261
            AR+ F+S++ K  V WN++I+GY Q+G   EA  LF +M  E ++  ++TF        
Sbjct: 110 EARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACS 169

Query: 262 ---------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                                        L+  Y + G  D A ++    + L I  DV 
Sbjct: 170 SPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQV---FDGLHIR-DVS 225

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           T+  M+ G+A++G   +A +LF  M  VG+ PN ++  S +  C   +ALA G  +H+  
Sbjct: 226 TFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQC 285

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           +  G  DD+ V  SLI MY+ C  +E A RVFD +K +DV SW  MI GY + G    A+
Sbjct: 286 MNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAF 345

Query: 415 ELFIKMQESDVPPNVITW-----------------------------------NVLISGY 439
            LF  MQE  + P+ IT+                                     L+  Y
Sbjct: 346 GLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMY 405

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
            + G   +A  +F  M + D V     SW+++I  Y + G    A   F  M+ S   P+
Sbjct: 406 AKCGAIKDARQVFDAMPRRDVV-----SWSAMIGAYVENGYGTEAFETFHLMKRSNIEPD 460

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
            VT +++L AC +L A +   EI+   ++  L S +P+ N+LI   AK G++  +R IFD
Sbjct: 461 GVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFD 520

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
            M  +D+ITWN++I GY LHG    AL LFD+M     +PN  TF+ ++ A S AG VD 
Sbjct: 521 TMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDE 580

Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
           G++ F  + E   I+P ++ Y  M+DL GR+G+L+EA   I+ MP++P SSIW +LL AC
Sbjct: 581 GRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVAC 640

Query: 680 RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFG 739
           RIHGN+D+A  A ER   ++P D  +   +  +YA  G  E+  KVRK+      R   G
Sbjct: 641 RIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQG 700

Query: 740 QCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------IEEEEKE 793
             WIEV   V+TFV    S      +Y+ L  +  N   R  +  +       + E++KE
Sbjct: 701 CTWIEVAGKVHTFVVEDRSHPLVGEIYAELARL-MNAIKREGYIPITQNVLHDVGEQQKE 759

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
           E    HSEKLA+A+ ++ S  +   IRI KN+R+C  CH  +K++S +   EI   D+  
Sbjct: 760 EAISYHSEKLAIAYGVL-SLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDASR 818

Query: 854 LHHFKNGQCSCGDYW 868
            HHFK+G CSCGDYW
Sbjct: 819 FHHFKDGVCSCGDYW 833



 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 163/635 (25%), Positives = 289/635 (45%), Gaps = 79/635 (12%)

Query: 14  SLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSI 73
           SL     + RFR T    +  N        VL  +   G  +   TY+ L Q C +    
Sbjct: 21  SLQLPVPSARFRSTFTRRVGAN-------DVLQRLGEGGNHIDSRTYVKLFQRCTELRDA 73

Query: 74  HLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY 132
            L +++    +    +++++    L+ +Y+ CG + +AR++F+ +  + + TW+A+I  Y
Sbjct: 74  ALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGY 133

Query: 133 SRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR 192
           ++    +E   LF  MV +GL P    F  +L AC +      GK +H+ V+  G     
Sbjct: 134 AQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDF 193

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
           R+  +++++YVK G +  AR+ F+ +  +D   +N M+ GY + G+ ++A  LF +M + 
Sbjct: 194 RIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQV 253

Query: 253 EIKLGVVTF-----------------------------------NILIRSYNQLGQCDVA 277
            +K   ++F                                     LIR Y   G  + A
Sbjct: 254 GLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGA 313

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
             +   M+      DV +WT MI G+A+NG    A  LF  M   G+ P+ +T    ++A
Sbjct: 314 RRVFDNMK----VRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNA 369

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C     L    EIHS     GF  D+LV  +L++MY+KC  ++ A +VFD +  +DV SW
Sbjct: 370 CAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSW 429

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
           ++MI  Y + GY  +A+E F  M+ S++ P+ +T+  L++     G  D  ++++ +  K
Sbjct: 430 SAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIK 489

Query: 458 ND------------------------------KVKRNTASWNSLIAGYQQLGQKNNALGV 487
            D                               V+R+  +WN++I GY   G    AL +
Sbjct: 490 ADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYL 549

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR-RSLESSLPVMNSLIDTYA 546
           F +M    F PN VT + VL AC+     ++ +     +L  R +  ++ +   ++D   
Sbjct: 550 FDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLG 609

Query: 547 KSGNIVYSRTIFDGMSSKDIIT-WNSLICGYVLHG 580
           ++G +  +  +   M  K   + W+SL+    +HG
Sbjct: 610 RAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHG 644



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 160/605 (26%), Positives = 268/605 (44%), Gaps = 79/605 (13%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF-VK 94
           G + EA  +   +  +G +    T++++L AC     ++  +++HA +     +  F + 
Sbjct: 137 GHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIG 196

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T L+S+Y K G +DDAR+VF+ +  R++ T++ M+G Y++   W +  ELF+ M Q GL 
Sbjct: 197 TALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLK 256

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+   F  IL  C        GK +H+  +  G+    RV  S++ +Y  CG +  ARR 
Sbjct: 257 PNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRV 316

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------- 261
           F++M  +D V+W  MI GY + G  ++A  LF  M  E I+   +T+             
Sbjct: 317 FDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANL 376

Query: 262 ----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                                   L+  Y + G    A ++   M       DV +W+ M
Sbjct: 377 NHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPR----RDVVSWSAM 432

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I  + +NG  ++A + F  M    + P+GVT  + ++AC  L AL +GMEI++ A+K   
Sbjct: 433 IGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADL 492

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
              V +GN+LI M +K   +E A  +FD +  +DV +WN+MI GY   G   +A  LF +
Sbjct: 493 VSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDR 552

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M +    PN +T+  ++S   + G  DE    F  + +   +      +  ++    + G
Sbjct: 553 MLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAG 612

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC--VLRRSLESSLPV 537
           + + A  + + M      P      S+L AC           IHG   V  R+ E  L  
Sbjct: 613 ELDEAELLIKSMPVK---PTSSIWSSLLVAC----------RIHGNLDVAERAAERCL-- 657

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
              +ID Y                   D   +  L   Y   G W     +   M+S G+
Sbjct: 658 ---MIDPY-------------------DGAVYVQLSHMYAAAGMWENVAKVRKVMESRGI 695

Query: 598 KPNRG 602
           +  +G
Sbjct: 696 RKEQG 700



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 198/450 (44%), Gaps = 73/450 (16%)

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
           R   A D+ + +   G   +  T       CT+L+  A+G ++    ++ G   ++   N
Sbjct: 37  RRVGANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELN 96

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           +LI +YS C  +  A ++FD +++K V +WN++IAGY Q G+  +A+ LF +M +  + P
Sbjct: 97  TLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEP 156

Query: 428 NVITW-----------------------------------NVLISGYIQNGNEDEAVDLF 452
           ++IT+                                     L+S Y++ G+ D+A  +F
Sbjct: 157 SIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVF 216

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
             +       R+ +++N ++ GY + G    A  +F +MQ     PN ++ LS+L  C  
Sbjct: 217 DGLH-----IRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWT 271

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 572
             A    K +H   +   L   + V  SLI  Y   G+I  +R +FD M  +D+++W  +
Sbjct: 272 PEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVM 331

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA-------------HSLAGMVDL 619
           I GY  +G    A  LF  M+  G++P+R T++ I+ A             HS   +   
Sbjct: 332 IEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGF 391

Query: 620 GKKVFCSIT---------------ECYQIIPM--IEHYSAMIDLYGRSGKLEEAMEFIED 662
           G  +  S                 + +  +P   +  +SAMI  Y  +G   EA E    
Sbjct: 392 GTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHL 451

Query: 663 MP---IEPDSSIWEALLTACRIHGNIDLAV 689
           M    IEPD   +  LL AC   G +D+ +
Sbjct: 452 MKRSNIEPDGVTYINLLNACGHLGALDVGM 481


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 287/908 (31%), Positives = 461/908 (50%), Gaps = 81/908 (8%)

Query: 36  GRLNEAITVLDSIATQG-AKVRRNTYIN--LLQACIDSNSIHLARKLHAFLNLVTEIDVF 92
           G LN A   L  ++T   A   R  + +  LL  C+   ++   ++LHA L L + +  F
Sbjct: 22  GTLNPAFQSLTLLSTHPLATPSRLEHAHSLLLDLCVAVKALPQGQQLHARL-LKSHLSAF 80

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           + TKLL +Y KCG L DA +VF++M ER ++TW+AM+GA+    ++ E +EL+  M   G
Sbjct: 81  LATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLG 140

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           +  D   FP +L+ACG  G+   G  +H + +K G      V N+++A+Y KCG L  AR
Sbjct: 141 VAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGAR 200

Query: 213 RFFES--MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------- 261
             F+   M+++D V+WNS+IS +   G+  EA  LF +M    +     TF         
Sbjct: 201 VLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVED 260

Query: 262 --------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                                     N LI  Y + G+    ME  +R+ +  +  D  +
Sbjct: 261 PSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGR----MEDAERVFASMLCRDYVS 316

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  ++SG  QN     AL+ F++M      P+ V++ + I+A      L  G E+H+ A+
Sbjct: 317 WNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAI 376

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           + G   ++ +GN+LI+MY+KC  ++     F+ + +KD+ SW ++IAGY Q     +A  
Sbjct: 377 RNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAIN 436

Query: 416 LFIKMQES--DVPPNVI-----------TWNVL--ISGYIQNGN------EDEAVDLFQR 454
           LF K+Q    DV P +I           + N +  I GY+   +      ++  V+++  
Sbjct: 437 LFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGE 496

Query: 455 MGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           +G  D  +R        +  SW S+I      G    AL +F  ++ +   P+ + I+S 
Sbjct: 497 VGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISA 556

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
           L A A L +  K KEIHG ++R+      P+ +SL+D YA  G +  SR +F  +  +D+
Sbjct: 557 LSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDL 616

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
           I W S+I    +HG  + A+ LF +M    + P+  TFL+++ A S +G++  GK+ F  
Sbjct: 617 ILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEI 676

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
           +   YQ+ P  EHY+ M+DL  RS  LEEA +F+  MPI+P S +W ALL AC IH N +
Sbjct: 677 MKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKE 736

Query: 687 LAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
           L  LA + L   +  +     LI  I+A  G+  D  +VR   + N  + + G  WIEV 
Sbjct: 737 LGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVD 796

Query: 747 NLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------IEEEEKEEISGIHS 800
           N ++TF+    S   +D +Y  L    + +  +  +          + EEEK ++   HS
Sbjct: 797 NKIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYIAQTKFVFHNVSEEEKTQMLYRHS 856

Query: 801 EKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNG 860
           E+LAL + L+ + +   +IRI KN+R+C  CH   K  S +    + + D+   HHF+ G
Sbjct: 857 ERLALGYGLLVTPKGT-SIRITKNLRICDDCHTFFKIASEVSQRALVVRDANRFHHFERG 915

Query: 861 QCSCGDYW 868
            CSCGD+W
Sbjct: 916 LCSCGDFW 923



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/542 (25%), Positives = 245/542 (45%), Gaps = 65/542 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFV 93
           +G+  EAI +   +   G  +   T+ ++L+AC       L  ++H         + VFV
Sbjct: 123 SGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVFV 182

Query: 94  KTKLLSVYAKCGCLDDAREVFED--MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
              L+++Y KCG L  AR +F+   M + +  +W+++I A+  + +  E + LF  M + 
Sbjct: 183 CNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQEV 242

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+  + + F   LQ   +    + G  +H   +K        V N+++A+Y KCG++  A
Sbjct: 243 GVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCGRMEDA 302

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI----RS 267
            R F SM  +D V+WN+++SG  Q     +A   F  M     K   V+   LI    RS
Sbjct: 303 ERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRS 362

Query: 268 YNQLGQCDVAMEMVKR---------------------MESLGIT------PDVFTWTCMI 300
            N L   +V    ++                      ++ +G         D+ +WT +I
Sbjct: 363 GNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTII 422

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +G+AQN    +A++LF+++   G+  + + I S + AC+ LK+     EIH    K    
Sbjct: 423 AGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLA 482

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D+++ N+++N+Y +    + A R F+ I+ KD+ SW SMI      G   +A ELF  +
Sbjct: 483 -DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSL 541

Query: 421 QESDVPPNVITWNVLISGY-----IQNGNE-----------------DEAVDLFQRMGKN 458
           +++++ P+ I     +S       ++ G E                    VD++   G  
Sbjct: 542 KQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTV 601

Query: 459 DKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +  +        R+   W S+I      G  N A+ +F+KM      P+ +T L++L AC
Sbjct: 602 ENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYAC 661

Query: 511 AY 512
           ++
Sbjct: 662 SH 663



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 106/477 (22%), Positives = 203/477 (42%), Gaps = 36/477 (7%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LN 84
           +T L  L  N    +A+     +     K  + + +NL+ A   S ++   +++HA+ + 
Sbjct: 318 NTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIR 377

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
              + ++ +   L+ +YAKC C+      FE M E++L +W+ +I  Y++++   E + L
Sbjct: 378 NGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINL 437

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           F  +   G+  D  +   +L+AC         + +H  V K  ++ +  ++N+++ VY +
Sbjct: 438 FRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADI-MLQNAIVNVYGE 496

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI---------- 254
            G   +ARR FES+  KD V+W SMI+     G   EA  LF  + +  I          
Sbjct: 497 VGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISA 556

Query: 255 ----------KLGVVTFNILIR-----------SYNQLGQCDVAMEMVKRMESLGITPDV 293
                     K G      LIR           S   +  C   +E  ++M       D+
Sbjct: 557 LSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDL 616

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
             WT MI+    +G  ++A+ LFK+M+   V+P+ +T  + + AC+    +  G     +
Sbjct: 617 ILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEI 676

Query: 354 AVKMGFTDDVLVGN--SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
            +K G+  +    +   ++++ S+   LE A +    +  K        + G C      
Sbjct: 677 -MKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNK 735

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           +  EL  K        N   + ++ + +  +G  ++  ++  RM  N   K    SW
Sbjct: 736 ELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSW 792


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 281/898 (31%), Positives = 462/898 (51%), Gaps = 72/898 (8%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLS 99
           +++T+L +          + +  LL  C+ + ++   ++LHA L L + +  F+ TKL+ 
Sbjct: 29  QSLTLLSTHPLATPSRLEHAHSLLLDLCVAAKALPQGQQLHALL-LKSHLSAFLATKLVL 87

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +Y KCG L DA +VF++M ER +++W+A++GA+    ++ E +EL+  M   G+  D   
Sbjct: 88  MYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACT 147

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES-- 217
           FP +L+ACG  G+   G  +H + +K G      V N+++A+Y KCG L  AR  F+   
Sbjct: 148 FPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIM 207

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR--------------------EEIKLG 257
           M+++D V+WNS+IS +   G   EA  LF +M                        +KLG
Sbjct: 208 MEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLG 267

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVK------RMESLG------ITPDVFTWTCMISGFAQ 305
           +     +++S N      VA  ++       RME  G      +  D  +W  ++SG  Q
Sbjct: 268 MGIHGAVLKS-NHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQ 326

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
           N   S AL+ F++M   G  P+ V++ + I+A      L  G E+H+ A++ G   ++ +
Sbjct: 327 NELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQI 386

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES-- 423
           GN+L++MY+KC  ++     F+ + +KD+ SW ++IAGY Q  +  +A  LF K+Q    
Sbjct: 387 GNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGM 446

Query: 424 DVPPNVI-----------TWNVL--ISGYIQNGN------EDEAVDLFQRMGKNDKVKR- 463
           DV P +I           + N +  I GY+   +      ++  V+++  +G  D  +R 
Sbjct: 447 DVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRA 506

Query: 464 -------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
                  +  SW S+I      G    AL +F  ++ +   P+ + I+S L A A L + 
Sbjct: 507 FESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSL 566

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
            K KEIHG ++R+      P+ +SL+D YA  G +  SR +F  +  +D+I W S+I   
Sbjct: 567 KKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINAN 626

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
            +HG  + A+ LF +M    + P+  TFL+++ A S +G++  GK+ F  +   YQ+ P 
Sbjct: 627 GMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPW 686

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF 696
            EHY+ M+DL  RS  LEEA  F+ +MPI+P S IW ALL AC IH N +L  LA + L 
Sbjct: 687 PEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELL 746

Query: 697 DLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG 756
             +  +     LI  I+A  G+  D  +VR   + N  + + G  WIEV N ++TF+   
Sbjct: 747 QSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARD 806

Query: 757 WSESYSDLLYSWLQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLALAFALI 810
            S   +D +Y  L    + +  +  +          + EEEK ++   HSE+LAL + L+
Sbjct: 807 KSHPQTDDIYLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLL 866

Query: 811 GSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            + +    IRI KN+R+C  CH   K  S +    + + D+   HHF+ G CSCGD+W
Sbjct: 867 VTPKGT-CIRITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 153/603 (25%), Positives = 265/603 (43%), Gaps = 97/603 (16%)

Query: 6   LTTFQQLHSLLTKKSNPRFRDTHLDFLCGN-GRLNEAITVLDSIATQ------------- 51
           L   QQLH+LL K     F  T L  + G  G L +A+ V D ++ +             
Sbjct: 62  LPQGQQLHALLLKSHLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFV 121

Query: 52  ------------------GAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VF 92
                             G  +   T+ ++L+AC       L  ++H         + VF
Sbjct: 122 SSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVF 181

Query: 93  VKTKLLSVYAKCGCLDDAREVFED--MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           V   L+++Y KCG L  AR +F+   M + +  +W+++I A+  +    E + LF  M +
Sbjct: 182 VCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQE 241

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G+  + + F   LQ   +    + G  +H  V+K        V N+++A+Y KCG++  
Sbjct: 242 VGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMED 301

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI----R 266
           A R FESM  +D V+WN+++SG  Q     +A   F  M     K   V+   LI    R
Sbjct: 302 AGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGR 361

Query: 267 SYNQLGQCDVAMEMVKR-MES---LGIT-----------------------PDVFTWTCM 299
           S N L   +V    ++  ++S   +G T                        D+ +WT +
Sbjct: 362 SGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTI 421

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I+G+AQN    +A++LF+++   G+  + + I S + AC+ LK+     EIH    K   
Sbjct: 422 IAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL 481

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             D+++ N+++N+Y +   ++ A R F+ I+ KD+ SW SMI      G   +A ELF  
Sbjct: 482 A-DIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYS 540

Query: 420 MQESDVPPNVITWNVLISGY-----IQNGNE-----------------DEAVDLFQRMGK 457
           ++++++ P+ I     +S       ++ G E                    VD++   G 
Sbjct: 541 LKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGT 600

Query: 458 NDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
            +  +        R+   W S+I      G  N A+ +F+KM      P+ +T L++L A
Sbjct: 601 VENSRKMFHSVKQRDLILWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYA 660

Query: 510 CAY 512
           C++
Sbjct: 661 CSH 663


>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g01030, mitochondrial; Flags: Precursor
 gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 254/784 (32%), Positives = 410/784 (52%), Gaps = 42/784 (5%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D  V +  +  Y +C  L  A ++F++M +R+   W+ ++    R   W + VELF  M 
Sbjct: 22  DTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQ 81

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             G    D    K+LQ C N   F  G+ +H  V++LG+     + NS++ +Y + GKL 
Sbjct: 82  FSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLE 141

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            +R+ F SM +++  +WNS++S                                   SY 
Sbjct: 142 LSRKVFNSMKDRNLSSWNSILS-----------------------------------SYT 166

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           +LG  D A+ ++  ME  G+ PD+ TW  ++SG+A  G +  A+ + K M   G+ P+  
Sbjct: 167 KLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTS 226

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           +I+S + A  +   L +G  IH   ++     DV V  +LI+MY K   L  A  VFDM+
Sbjct: 227 SISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM 286

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
             K++ +WNS+++G   A     A  L I+M++  + P+ ITWN L SGY   G  ++A+
Sbjct: 287 DAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKAL 346

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           D+  +M K   V  N  SW ++ +G  + G   NAL VF KMQ     PN  T+ ++L  
Sbjct: 347 DVIGKM-KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKI 405

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
              L   +  KE+HG  LR++L     V  +L+D Y KSG++  +  IF G+ +K + +W
Sbjct: 406 LGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASW 465

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
           N ++ GY + G     +  F  M   G++P+  TF S++     +G+V  G K F  +  
Sbjct: 466 NCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRS 525

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            Y IIP IEH S M+DL GRSG L+EA +FI+ M ++PD++IW A L++C+IH +++LA 
Sbjct: 526 RYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAE 585

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLV 749
           +A +RL  LEP +     +++ +Y+   + ED  ++R L R N  R      WI++   V
Sbjct: 586 IAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTV 645

Query: 750 YTFVTGGWSES-YSDLLYSWLQNVPENVTARSSHSGLCIEEE----EKEEISGIHSEKLA 804
           + F   G +     D+ +   + V E   +       CI ++    EKE++   H+EKLA
Sbjct: 646 HIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLA 705

Query: 805 LAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
           + + LI   +    IR+VKN  +C   H  AKY+S++ + EI L +   +HHF++G+CSC
Sbjct: 706 MTYGLI-KKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSC 764

Query: 865 GDYW 868
            D W
Sbjct: 765 NDSW 768



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 224/450 (49%), Gaps = 41/450 (9%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           +G   +A+ +   +   GAK   +T + LLQ C +       R++H + L L  E +V +
Sbjct: 67  SGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSM 126

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR-----------DQ------ 136
              L+ +Y++ G L+ +R+VF  M++RNL +W++++ +Y++           D+      
Sbjct: 127 CNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGL 186

Query: 137 -----RW-------------REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
                 W             ++ + +   M   GL P       +LQA    G  + GK 
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKA 246

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H  +++  +     V  +++ +Y+K G L +AR  F+ MD K+ VAWNS++SG      
Sbjct: 247 IHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACL 306

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
             +A  L  +M +E IK   +T+N L   Y  LG+ + A++++ +M+  G+ P+V +WT 
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           + SG ++NG    AL +F +M   GV PN  T+++ +     L  L  G E+H   ++  
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              D  V  +L++MY K  +L++A  +F  IK+K + SWN M+ GY   G   +    F 
Sbjct: 427 LICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFS 486

Query: 419 KMQESDVPPNVITWNVLI-----SGYIQNG 443
            M E+ + P+ IT+  ++     SG +Q G
Sbjct: 487 VMLEAGMEPDAITFTSVLSVCKNSGLVQEG 516



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 107/209 (51%), Gaps = 6/209 (2%)

Query: 522 IHGCVLRRSLESS-LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
           IHG +++R L++S   V+++ +  Y +  ++ ++  +FD M  +D + WN ++   +  G
Sbjct: 9   IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
            W  A++LF +M+  G K    T + ++   S       G+++   +     +   +   
Sbjct: 69  NWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRL-GLESNVSMC 127

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL--FDL 698
           +++I +Y R+GKLE + +    M  + + S W ++L++    G +D A+  ++ +    L
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGL 186

Query: 699 EPGDVLIQRLILQIYAICGKPEDALKVRK 727
           +P D++    +L  YA  G  +DA+ V K
Sbjct: 187 KP-DIVTWNSLLSGYASKGLSKDAIAVLK 214


>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 263/848 (31%), Positives = 432/848 (50%), Gaps = 49/848 (5%)

Query: 30  DFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTE 88
           +F    G  +E + V   +  +G K        +L+ C+    + L  ++HA  +     
Sbjct: 104 EFASFGGDSHEILAVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLVKRGFH 163

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
           +DV +   L+++Y K   +D A +VF++   +  + W+ ++ A  R ++W + +ELF  M
Sbjct: 164 VDVHLSCALINLYEKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFRRM 223

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
                   D    K+LQACG       GK +H  VI+ G      + NS++++Y +  +L
Sbjct: 224 QSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNNRL 283

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             AR  F+S ++ +  +WNS+IS Y                                   
Sbjct: 284 ELARVAFDSTEDHNSASWNSIISSY----------------------------------- 308

Query: 269 NQLGQC-DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
             +  C + A ++++ MES G+ PD+ TW  ++SG    G     L  F+ +   G  P+
Sbjct: 309 -AVNDCLNGAWDLLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPD 367

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             +ITSA+ A   L    +G EIH   ++     DV V  SL++ Y K + L+ AE VF 
Sbjct: 368 SCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEYDVYVCTSLVDKYIKNDCLDKAEVVFH 427

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
             K+K++ +WNS+I+GY   G    A +L  +M+E  + P+++TWN L+SGY  +G  +E
Sbjct: 428 HTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEE 487

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           A+ +  R+ K+  +  N  SW ++I+G  Q     +AL  F +MQ     PN  TI ++L
Sbjct: 488 ALAVINRI-KSLGLTPNVVSWTAMISGCCQNENYMDALQFFSQMQEENVKPNSTTICTLL 546

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
            ACA        +EIH   +R      + +  +LID Y K G +  +  +F  +  K + 
Sbjct: 547 RACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALIDMYGKGGKLKVAHEVFRNIKEKTLP 606

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
            WN ++ GY ++G       LFD+M+  G++P+  TF +++     +G+V  G K F S+
Sbjct: 607 CWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPDAITFTALLSGCKNSGLVMDGWKYFDSM 666

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
              Y I P IEHYS M+DL G++G L+EA++FI  +P + D+SIW A+L ACR+H +I +
Sbjct: 667 KTDYNINPTIEHYSCMVDLLGKAGFLDEALDFIHAVPQKADASIWGAVLAACRLHKDIKI 726

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
           A +A   L  LEP +     L++ IY+   +  D  ++++       +      WI+VK 
Sbjct: 727 AEIAARNLLRLEPYNSANYALMMNIYSTFDRWGDVERLKESMTALGVKIPNVWSWIQVKQ 786

Query: 748 LVYTFVTGGWS-----ESYSDL--LYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHS 800
            ++ F T G S     E Y +L  L S ++ +   +     H    I++ EKE++   H+
Sbjct: 787 TIHVFSTEGKSHPEEGEIYFELYQLISEIKKLGYVLDINCVHQN--IDDSEKEKVLLSHT 844

Query: 801 EKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNG 860
           EKLA+ + L+  ++    IR+VKN R+C  CH TAKY+S+  + EIFL D    HHF NG
Sbjct: 845 EKLAMTYGLM-KTKGGSPIRVVKNTRICHDCHTTAKYISLARNREIFLRDGGRFHHFMNG 903

Query: 861 QCSCGDYW 868
           +CSC D W
Sbjct: 904 ECSCKDRW 911


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 296/946 (31%), Positives = 459/946 (48%), Gaps = 94/946 (9%)

Query: 7   TTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQG-AKVRRNTYINLLQ 65
           T     H    +K  P      L  LC +G L EA+  L + + +G A    + Y  +L 
Sbjct: 4   TAALPFHPTPRRKLPPASAGASLRQLCKDGDLREALRQLAARSARGRAPPPTDHYGWVLD 63

Query: 66  ACIDSNSIHLARKLHAFL----NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
                 ++   R+LHA       L  +   F+ TKLL +Y KCG L DA  +F+ M  R 
Sbjct: 64  LVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPART 123

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQD----GLFPDDFLFPKILQACGNCGDFEAGK 177
           +++W+A+IGA        E V ++  M       G  PD      +L+ACG  GD   G 
Sbjct: 124 VFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGS 183

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM-DEKDGVAWNSMISGYFQI 236
            +H L +K G+     V N+++ +Y KCG L  A R FE M D +D  +WNS ISG  Q 
Sbjct: 184 EVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQN 243

Query: 237 GENDEAHRLFDKMCREEIKLGVVT------------------------------FNI--- 263
           G   EA  LF +M  +   +   T                              FNI   
Sbjct: 244 GMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQCN 303

Query: 264 -LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            L+  Y + G  D A+ + + +       D  +W  M+S + QN   ++A+D F EM   
Sbjct: 304 ALLVMYARCGWVDSALRVFREIGD----KDYISWNSMLSCYVQNRLYAEAIDFFGEMVQN 359

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           G  P+   I S +SA   L  L  G E+H+ AVK     D+ + N+L++MY KC  +E +
Sbjct: 360 GFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECS 419

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES--DVPP------------- 427
            RVFD ++ KD  SW ++IA Y Q+    +A   F   Q+    V P             
Sbjct: 420 ARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGL 479

Query: 428 -------------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                              ++I  N +I  Y + G    A+++F+ + K D V     +W
Sbjct: 480 KSISLLKQVHSYAIRNGLLDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIV-----TW 534

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
            S++  + + G  + A+ +F KM ++   P+ V ++ +L A A L +  K KEIHG ++R
Sbjct: 535 TSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKEIHGFLIR 594

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
                   V++SL+D Y+  G++ Y+  +FD    KD++ W ++I    +HG    A+ +
Sbjct: 595 GKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWTAMINATGMHGHGKQAIYI 654

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F +M   G+ P+  +FL+++ A S + +VD GK     +   Y++ P  EHY+ ++DL G
Sbjct: 655 FKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEHYACVVDLLG 714

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           RSG+ EEA +FI+ MP+EP S +W ALL ACRIH N +LA++A ++L +LEP +     L
Sbjct: 715 RSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMIATDKLLELEPDNPGNYVL 774

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  ++A  GK  +  ++R    E   R      WIE+ N V+TF     S   S  ++  
Sbjct: 775 VSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVHTFTARDHSHRDSQAIHLK 834

Query: 769 LQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
           L  + E +     +          + EEEK ++   HSE+LA++F LI S+ +   +RI 
Sbjct: 835 LAEITEKLRREGQYVEDTSFVLHDVSEEEKIDLLHRHSERLAISFGLI-STASGTPLRIA 893

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN+R+C  CHE  K VS +   EI + D+   HHF  G CSCGD+W
Sbjct: 894 KNLRVCGDCHEFTKLVSKLFEREIVVRDANRFHHFSGGTCSCGDFW 939


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 273/905 (30%), Positives = 445/905 (49%), Gaps = 101/905 (11%)

Query: 46  DSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCG 105
           D  ++     R    + LL+A  D   +   R++HA + +   ++  +   LL +Y KC 
Sbjct: 18  DLPSSSSGATRPAHLVRLLRAAGDDRLLSQGRRIHARI-VSLGLEEELGNHLLRLYLKCE 76

Query: 106 CLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQ 165
            L D  EVF  +  R+  +W+ +I AY+   + +  + +F  M Q+G+  D   F  +L+
Sbjct: 77  SLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLK 136

Query: 166 ACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA 225
           AC   GD   G+ +H+ +++ G+     + N +L +Y  CG +  A   FE M E+D V+
Sbjct: 137 ACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVS 195

Query: 226 WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI---------------------- 263
           WN+ I+   Q G+ D A  LF +M  E ++   +T  I                      
Sbjct: 196 WNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQARAIHSIVRESG 255

Query: 264 ----------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
                     L  +Y +LG  D A E+  R        DV +W  M+  +AQ+G  S+A 
Sbjct: 256 LEQTLVVSTALASAYARLGHLDQAKEVFDR----AAERDVVSWNAMLGAYAQHGHMSEAA 311

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
            LF  M   G+ P+ VT+ +A + C+ L+    G  IH+ A++ G   D+++GN+L++MY
Sbjct: 312 LLFARMLHEGIPPSKVTLVNASTGCSSLR---FGRMIHACALEKGLDRDIVLGNALLDMY 368

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
           ++C   E A  +F+ I    V SWN+MIAG  Q G   +A ELF +MQ   + P   T+ 
Sbjct: 369 TRCGSPEEARHLFEGIPGNAV-SWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYL 427

Query: 434 VLISGYIQNGNE---------------------------------------DEAVDLFQR 454
            L+     N  E                                       DEA   FQR
Sbjct: 428 NLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQR 487

Query: 455 MGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV 514
               D  + +  SWN++I+   Q G    ALG FR+M      PN +T ++VL ACA   
Sbjct: 488 GAMED--RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAA 545

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLI 573
           A  +   +H  +    +ES++ V  +L   Y + G++  +R IF+ ++  +D++ +N++I
Sbjct: 546 ALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMI 605

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
             Y  +G    AL LF +M+  G +P+  +F+S++ A S  G+ D G ++F S+ + Y I
Sbjct: 606 AAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGI 665

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
            P  +HY+  +D+ GR+G L +A E I  M ++P   +W+ LL ACR + ++D   LA  
Sbjct: 666 APSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANS 725

Query: 694 RLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFV 753
            + +L+PGD     ++  I A  GK ++A +VR        R   G+ WIE+K+ V+ FV
Sbjct: 726 MVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFV 785

Query: 754 TGGWSESYSDLLYSWLQN----------VPENVTARSSHSGLCIEEEEKEEISGIHSEKL 803
            G  S   S+ +Y  L+           VP+            ++E EKE +   HSE+L
Sbjct: 786 AGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRK-----VDEAEKERLLCQHSERL 840

Query: 804 ALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCS 863
           A+A  ++ SS    T+R++KN+R+C  CH   K++S + + EI + D+   HHF +G CS
Sbjct: 841 AIALGVMSSS--TDTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCS 898

Query: 864 CGDYW 868
           CGDYW
Sbjct: 899 CGDYW 903



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 154/621 (24%), Positives = 267/621 (42%), Gaps = 100/621 (16%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           +G+   AI +   +  +G +    T++ +L+AC     +   R +HA++     E    +
Sbjct: 106 HGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVL 165

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              LL +Y  CGC+  A  +FE M ER+L +W+A I A ++       +ELF  M  +G+
Sbjct: 166 ANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGV 224

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P        L  C         + +HS+V + G+     V  ++ + Y + G L  A+ 
Sbjct: 225 RPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKE 281

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------ 261
            F+   E+D V+WN+M+  Y Q G   EA  LF +M  E I    VT             
Sbjct: 282 VFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSLRF 341

Query: 262 --------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                               N L+  Y + G  + A  + +     GI  +  +W  MI+
Sbjct: 342 GRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFE-----GIPGNAVSWNTMIA 396

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT----DLKALAMGMEIHSLAVKM 357
           G +Q G+  +AL+LF+ M   G+ P   T  + + A      + +A+A G ++HS  V  
Sbjct: 397 GSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSC 456

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFD---MIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           G+  +  +G +++ MY+ C  ++ A   F    M    DV SWN++I+   Q G+  +A 
Sbjct: 457 GYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRAL 516

Query: 415 ELFIKMQESDVPPNVIT-----------------------------------WNVLISGY 439
             F +M    V PN IT                                      L S Y
Sbjct: 517 GFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMY 576

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
            + G+ + A ++F+++     V+R+   +N++IA Y Q G    AL +F +MQ     P+
Sbjct: 577 GRCGSLESAREIFEKVA----VERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPD 632

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS------LIDTYAKSGNIVY 553
             + +SVL AC++   +++  EI      RS+  S  +  S       +D   ++G +  
Sbjct: 633 EQSFVSVLSACSHGGLADEGWEIF-----RSMRQSYGIAPSEDHYACAVDVLGRAGWLAD 687

Query: 554 SRTIFDGMSSKD-IITWNSLI 573
           +  +   M  K  ++ W +L+
Sbjct: 688 AEELIRCMDVKPTVLVWKTLL 708



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 161/338 (47%), Gaps = 13/338 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACI----DSNSIHLARKLHA-FLNLVTEI 89
            G++  A+ +   +  +G    R TY+NLL+A      ++ ++   RKLH+  ++     
Sbjct: 401 KGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYAS 460

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFED--MRER-NLYTWSAMIGAYSRDQRWREVVELFF 146
           +  + T ++ +YA CG +D+A   F+   M +R ++ +W+A+I + S+    +  +  F 
Sbjct: 461 EPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFR 520

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M   G+ P+      +L AC        G ++H  +   GM     V  ++ ++Y +CG
Sbjct: 521 RMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCG 580

Query: 207 KLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            L  AR  FE +  E+D V +N+MI+ Y Q G   EA +LF +M +E  +    +F  ++
Sbjct: 581 SLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVL 640

Query: 266 RSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
            + +  G  D   E+ + M +S GI P    + C +    + G  + A +L + M    V
Sbjct: 641 SACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMD---V 697

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
            P  +   + + AC   + +  G   +S+  ++   D+
Sbjct: 698 KPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDE 735


>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1305

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 250/786 (31%), Positives = 412/786 (52%), Gaps = 46/786 (5%)

Query: 90   DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
            D  V + L+  Y +C  LD A ++F++M +R+   W+ ++    +   W + V+LF +M 
Sbjct: 559  DTRVVSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSGNWEKAVKLFRVMR 618

Query: 150  QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
              G    D    K+LQ C N   F  G+ +H  V++LG      + NS++ +Y + GKL 
Sbjct: 619  FSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCNSLIVMYSRNGKLE 678

Query: 210  WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
             +R+ F SM +++  +WNS++S                                   SY 
Sbjct: 679  SSRKVFNSMVDRNLSSWNSIVS-----------------------------------SYT 703

Query: 270  QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            +LG  D AM ++  ME+ G+ PD+ TW  ++SG+A    +  A+ + K +   G+ PN  
Sbjct: 704  RLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTS 763

Query: 330  TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
            +I+S + A  +   + +G  IH   ++     DV V  +LI+MY K   L  A  VFDM+
Sbjct: 764  SISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM 823

Query: 390  KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
             +K++ +WNS+I+G    G   +A  L  +M++  +  N +TWN L+SGY   G  ++A+
Sbjct: 824  DEKNIVAWNSLISGLSYTGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKAL 883

Query: 450  DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
             +  +M KN  V+ N  SW ++++G  + G   N L +F KMQ     PN  TI S+L  
Sbjct: 884  AVVGKMKKNG-VEPNVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRI 942

Query: 510  CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
               L      KE+H   L+ +L     V  +L+D YAKSG++  +  IF G+ +K + +W
Sbjct: 943  LGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASW 1002

Query: 570  NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
            N +I GY +       + +F+ M   G++P+  TF S++     +G+V  G K F  +  
Sbjct: 1003 NCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLMRS 1062

Query: 630  CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
             Y +IP IEH S M++L GRSG L+EA +FI  MP++PD++IW A L++C+IH +++LA 
Sbjct: 1063 HYGVIPTIEHCSCMVELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIHRDLELAE 1122

Query: 690  LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLV 749
            +A +RL  LEP +     +++ +Y+   +  D  ++R     N  R      WI++   V
Sbjct: 1123 IAWKRLQVLEPHNSANYMMMINLYSNLNRWGDVERIRNSMSNNRVRVQDLWSWIQIDQTV 1182

Query: 750  YTFVTGGWS-----ESYSDL--LYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEK 802
            + F   G +     E Y +L  L S ++        R  H    + E EKE++   H+EK
Sbjct: 1183 HIFYAEGKAHPDEGEIYFELYKLVSEMKKSGYMPDTRCIHQN--VSESEKEKLLMGHTEK 1240

Query: 803  LALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQC 862
            LA+ + LI   +    IR+VKN  +C  CH  AKY+S++ + EI L +   +HHF++G+C
Sbjct: 1241 LAMTYGLI-KKKGIAPIRVVKNTNLCSDCHTVAKYISVLRNREIVLQEGARVHHFRDGKC 1299

Query: 863  SCGDYW 868
            SC + W
Sbjct: 1300 SCNNSW 1305



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 135/439 (30%), Positives = 224/439 (51%), Gaps = 36/439 (8%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
            +G   +A+ +   +   GAK   +T + LLQ C +       R++H + L L  E +V +
Sbjct: 604  SGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSM 663

Query: 94   KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR-----------DQ------ 136
               L+ +Y++ G L+ +R+VF  M +RNL +W++++ +Y+R           D+      
Sbjct: 664  CNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDEMETCGL 723

Query: 137  -----RW-------------REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
                  W             R+ + +   +   GL P+      +LQA    G  + GK 
Sbjct: 724  KPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGLVKLGKA 783

Query: 179  MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
            +H  VI+  +     V  +++ +Y+K G L +AR  F+ MDEK+ VAWNS+ISG    G 
Sbjct: 784  IHGYVIRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDEKNIVAWNSLISGLSYTGL 843

Query: 239  NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
              EA  L  +M +E IK   VT+N L+  Y   G+ + A+ +V +M+  G+ P+V +WT 
Sbjct: 844  LKEAEALISRMEKEGIKSNAVTWNSLVSGYATWGKTEKALAVVGKMKKNGVEPNVVSWTA 903

Query: 299  MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
            ++SG ++NG     L +F +M   GV PN  TI+S +     L  L  G E+HS  +K  
Sbjct: 904  ILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNN 963

Query: 359  FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
             T D  V  +L++MY+K  +L++A  +F  IK+K + SWN MI GY       +   +F 
Sbjct: 964  LTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFN 1023

Query: 419  KMQESDVPPNVITWNVLIS 437
             M E+ + P+ IT+  ++S
Sbjct: 1024 AMLEAGIEPDAITFTSVLS 1042



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 128/293 (43%), Gaps = 47/293 (16%)

Query: 463 RNTASWNSLIAGYQQLG-QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
           RN  SW   +   +  G +K   L  F ++Q+     + V +  V   CA L+       
Sbjct: 486 RNQVSWRDFLEKAEDFGVEKYKVLEEFVRLQNKGVNFDEVVLAMVFRICAVLMYRFLGFT 545

Query: 522 IHGCVLRRSLESS-LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
           IHG +++R L++S   V+++L+  Y +  ++  +  IFD M  +D + WN ++   +  G
Sbjct: 546 IHGGLIKRGLDNSDTRVVSALMGFYGRCVSLDLANKIFDEMPKRDDLAWNEIVMVNLQSG 605

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFL----------------------------------- 605
            W  A+ LF  M+  G K    T +                                   
Sbjct: 606 NWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGFESNVSMCN 665

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP- 664
           S+I+ +S  G ++  +KVF S+ +       +  +++++  Y R G +++AM  +++M  
Sbjct: 666 SLIVMYSRNGKLESSRKVFNSMVD-----RNLSSWNSIVSSYTRLGYVDDAMGLLDEMET 720

Query: 665 --IEPDSSIWEALLT--ACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIY 713
             ++PD   W +LL+  A +      +AVL   ++  L+P    I  L+  +Y
Sbjct: 721 CGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVY 773


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 268/839 (31%), Positives = 429/839 (51%), Gaps = 95/839 (11%)

Query: 110 AREVFEDMRER--NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC 167
           A  +F+ +  R   L   + ++ +YSRD++ +E + LF  ++   L PD+     +   C
Sbjct: 44  AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103

Query: 168 GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
               D + G+ +H   +K G+     V  S++ +Y+K   +   RR F+ M E++ V+W 
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163

Query: 228 SMISGYFQIGENDEAHRLFDKMCREE---------------IKLGVV------------- 259
           S+++GY   G       LF +M  E                +  GVV             
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223

Query: 260 -------TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
                   FN LI  Y++LG    A ++  +ME      D  TW  MI+G+ +NG+  + 
Sbjct: 224 GFEEAIPVFNSLISLYSRLGMLRDARDVFDKME----IRDWVTWNSMIAGYVRNGQDLEV 279

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
            ++F +M   GV P  +T  S I +C  L+ LA+   +   A+K GFT D +V  +L+  
Sbjct: 280 FEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVA 339

Query: 373 YSKCEELEAAERVFDMIKD-KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
            SKC+E++ A  +F ++++ K+V SW +MI+G  Q G   +A  LF +M+   V PN  T
Sbjct: 340 LSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFT 399

Query: 432 WN-------------------------------VLISGYIQNGNEDEAVDLFQRMGKNDK 460
           ++                                L+  Y++ GN  +AV +F+ +   D 
Sbjct: 400 YSAILTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDL 459

Query: 461 VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY-LVASNKV 519
           +     +W++++AGY Q G+   A  +F ++      PN  T  SV+ ACA    A+ + 
Sbjct: 460 M-----AWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQG 514

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
           K+ H   ++  L ++L V ++L+  YAK GNI  +  +F     +D+++WNS+I GY  H
Sbjct: 515 KQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQH 574

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
           G    AL++FD+M+   +  +  TF+ +I A + AG+V+ G+K F S+   + I P ++H
Sbjct: 575 GQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKH 634

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
           YS MIDLY R+G LE+AM  I +MP  P +++W  LL A R+H N++L  LA E+L  L+
Sbjct: 635 YSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQ 694

Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSE 759
           P D     L+  +YA  G  ++   VRKL  +   +   G  WIEVKN  Y+F+ G  + 
Sbjct: 695 PEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTH 754

Query: 760 SYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALI 810
             S+ +YS L      ++ R   +G           IE+E+KE I   HSE+LA+AF LI
Sbjct: 755 PLSNQIYSKLS----ELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLI 810

Query: 811 GS-SQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +  + P  I+IVKN+R+C  CH   K VS++    I + DS   HHFK+G CSCGDYW
Sbjct: 811 ATPPEIP--IQIVKNLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867



 Score =  225 bits (574), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 170/612 (27%), Positives = 286/612 (46%), Gaps = 82/612 (13%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFVKTKLL 98
           EA+ +  S+     +   +T   +   C  S    L R++H        +D V V T L+
Sbjct: 76  EALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLV 135

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +Y K   ++D R VF++M ERN+ +W++++  YS +  +  V ELF  M  +G+ P+ +
Sbjct: 136 DMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRY 195

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
               ++ A  N G    G  +H++V+K G      V NS++++Y + G L  AR  F+ M
Sbjct: 196 TVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKM 255

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS--------YNQ 270
           + +D V WNSMI+GY + G++ E   +F+KM    +K   +TF  +I+S          +
Sbjct: 256 EIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVK 315

Query: 271 LGQCD-----------------VAMEMVKRMES-------LGITPDVFTWTCMISGFAQN 306
           L QC                  VA+   K M+        +    +V +WT MISG  QN
Sbjct: 316 LMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQN 375

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           G   QA++LF +M   GV PN  T     SA   +       E+H+  +K  +     VG
Sbjct: 376 GGNDQAVNLFSQMRREGVKPNHFT----YSAILTVHYPVFVSEMHAEVIKTNYERSSSVG 431

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
            +L++ Y K      A +VF++I+ KD+ +W++M+AGY Q G   +A +LF ++ +  + 
Sbjct: 432 TALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIK 491

Query: 427 PNVITW------------------------------------NVLISGYIQNGNEDEAVD 450
           PN  T+                                    + L++ Y + GN D A +
Sbjct: 492 PNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHE 551

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +F+R  + D V     SWNS+I+GY Q GQ   AL VF +MQ      + VT + V+ AC
Sbjct: 552 VFKRQKERDLV-----SWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITAC 606

Query: 511 AY--LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDII 567
            +  LV   + K  +  +    +  ++   + +ID Y+++G +  +  I + M       
Sbjct: 607 THAGLVEKGQ-KYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGAT 665

Query: 568 TWNSLICGYVLH 579
            W +L+    +H
Sbjct: 666 VWRTLLGAARVH 677



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 208/477 (43%), Gaps = 55/477 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFV 93
           NG+  E   + + +   G K    T+ +++++C     + L + +    L      D  V
Sbjct: 273 NGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIV 332

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
            T L+   +KC  +DDA  +F  M E +N+ +W+AMI    ++    + V LF  M ++G
Sbjct: 333 ITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREG 392

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P+ F +  IL         E    MH+ VIK        V  ++L  YVK G  I A 
Sbjct: 393 VKPNHFTYSAILTVHYPVFVSE----MHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAV 448

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS----- 267
           + FE ++ KD +AW++M++GY Q GE +EA +LF ++ +E IK    TF+ +I +     
Sbjct: 449 KVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPT 508

Query: 268 -------------------------------YNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                                          Y + G  D A E+ KR +      D+ +W
Sbjct: 509 AAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKE----RDLVSW 564

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             MISG++Q+G+  +AL++F EM    +  + VT    I+ACT    +  G +  +  + 
Sbjct: 565 NSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMIN 624

Query: 357 MGFTDDVLVGNS-LINMYSKCEELEAAERVF-DMIKDKDVYSWNSMIAG---YCQAGYCG 411
               +  +   S +I++YS+   LE A  +  +M        W +++     +       
Sbjct: 625 DHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGE 684

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
            A E  I +Q  D    V+  N+    Y   GN  E  ++ + M K    K    SW
Sbjct: 685 LAAEKLISLQPEDSAAYVLLSNM----YAAAGNWQERTNVRKLMDKRKVKKEPGYSW 737


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 266/862 (30%), Positives = 426/862 (49%), Gaps = 104/862 (12%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T++ +L +C     +   R LH  +     E D  V   L+S+Y KC  L DAR VFE M
Sbjct: 9   TFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM 68

Query: 118 --RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
             R+RN+ +W+AMI AY+++    E + L++ M   GL  D   F  +L   G C     
Sbjct: 69  DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVL---GACSSLAQ 125

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G+ +H+ V   G+   + + N+++ +Y + G +  A+R F+S+  +D  +WN++I  + Q
Sbjct: 126 GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQ 185

Query: 236 IGENDEAHRLFDKM-------------------CREEIKLG---------------VVTF 261
            G+   A R+F +M                     E +  G               +V  
Sbjct: 186 SGDWSGALRIFKEMKCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVA 245

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
             LI  Y + G    A E+  +M+      D+ +W  MI  + QNG   +AL+L++++  
Sbjct: 246 TALINMYGKCGSSHEAREVFDKMKK----RDMVSWNVMIGCYVQNGDFHEALELYQKLDM 301

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
            G      T  S + AC+ +KALA G  +HS  ++ G   +V V  +L+NMY+KC  LE 
Sbjct: 302 EGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEE 361

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
           A +VF+ +K++D                                    + W+ LI  Y  
Sbjct: 362 ARKVFNAMKNRDA-----------------------------------VAWSTLIGAYAS 386

Query: 442 NG---NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC-FY 497
           NG   +  +A  +F R+G      R+T  WN++I  Y Q G    A+ +FR+M  +    
Sbjct: 387 NGYGKDARKARKVFDRLGS-----RDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLK 441

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P+ VT ++VL ACA L   ++VK +H  +    LES++ V N+LI+ YA+ G++  +  +
Sbjct: 442 PDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERL 501

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           F     K +++W +++  +  +G +  ALDLF +M   G+KP+  T+ SI+   +  G +
Sbjct: 502 FAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSL 561

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
           + G + F  + E + + P  +H++AM+DL GRSG+L +A E +E MP EPD   W   LT
Sbjct: 562 EQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLT 621

Query: 678 ACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNS 737
           ACRIHG ++L   A ER+++L+P        +  IYA  G  E    VRK   E   +  
Sbjct: 622 ACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKL 681

Query: 738 FGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPENVTARSSHSGLCI 787
            G  +IEV   ++ F +GG     +D +   L            VP+  T    H    +
Sbjct: 682 PGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPD--TKAVLHD---V 736

Query: 788 EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIF 847
            E EKE +   HSEK+A+AF L+ S  +   IR+VKN+R+C  CH   K+++ +   +I 
Sbjct: 737 SEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDII 796

Query: 848 LADSKCLHHF-KNGQCSCGDYW 868
           L D    H F  +G+CSCGDYW
Sbjct: 797 LRDCNRFHRFSSDGKCSCGDYW 818



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 148/646 (22%), Positives = 270/646 (41%), Gaps = 117/646 (18%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF-- 92
           NG   EA+ +   +  QG      T++++L AC   +S+   R++H  +   + +D F  
Sbjct: 88  NGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---SSLAQGREIHNRV-FYSGLDSFQS 143

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           +   L+++YA+ G + DA+ +F+ ++ R+  +W+A+I A+S+   W   + +F  M  D 
Sbjct: 144 LANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD- 202

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P+   +  ++           G+ +H+ ++  G      V  +++ +Y KCG    AR
Sbjct: 203 MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEAR 262

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------- 261
             F+ M ++D V+WN MI  Y Q G+  EA  L+ K+  E  K    TF           
Sbjct: 263 EVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVK 322

Query: 262 ------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                     L+  Y + G  + A ++   M++     D   W+
Sbjct: 323 ALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKN----RDAVAWS 378

Query: 298 CMISGFA----------------------------------QNGRTSQALDLFKEMS-FV 322
            +I  +A                                  QNG    A+ +F+EM+   
Sbjct: 379 TLIGAYASNGYGKDARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAA 438

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           G+ P+ VT  + + AC  L  L+    +H+   +     +V+V N+LINMY++C  LE A
Sbjct: 439 GLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEA 498

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
           ER+F   K+K V SW +M+A + Q G   +A +LF +M    V P+ +T+  ++      
Sbjct: 499 ERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHG 558

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G+ ++    F  M +   +      + +++     LG+          ++S  F P+ V 
Sbjct: 559 GSLEQGWRYFTDMAELHGLAPTADHFAAMV---DLLGRSGRLFDAKELLESMPFEPDPVA 615

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
            ++ L AC           IHG                 ++    +   VY     D  S
Sbjct: 616 WMTFLTAC----------RIHG----------------KLELGEAAAERVYE---LDPSS 646

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG-TFLSI 607
           +   I  +++   Y  HG W     +  +M+  GLK   G +F+ +
Sbjct: 647 TAPYIAMSNI---YAAHGMWEKVASVRKKMEERGLKKLPGLSFIEV 689



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 209/435 (48%), Gaps = 44/435 (10%)

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P+ VT  + + +C+    +A G  +H       F  D +VGN+LI+MY KC+ L  A  V
Sbjct: 5   PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64

Query: 386 FDMI--KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW----------- 432
           F+ +  + ++V SWN+MIA Y Q G+  +A  L+ +M    +  + +T+           
Sbjct: 65  FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA 124

Query: 433 ---------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                                N L++ Y + G+  +A  +FQ +   D+      SWN++
Sbjct: 125 QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDET-----SWNAV 179

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           I  + Q G  + AL +F++M+     PN  T ++V+   +      + ++IH  ++    
Sbjct: 180 ILAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
           +S L V  +LI+ Y K G+   +R +FD M  +D+++WN +I  YV +G +H AL+L+ +
Sbjct: 239 DSDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQK 298

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           +   G K  + TF+SI+ A S    +  G+ V   I E   +   +   +A++++Y + G
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILE-RGLDSEVAVATALVNMYAKCG 357

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD-LEPGDVLIQRLIL 710
            LEEA +    M    D+  W  L+ A   +G    A  A  ++FD L   D +    ++
Sbjct: 358 SLEEARKVFNAMK-NRDAVAWSTLIGAYASNGYGKDARKA-RKVFDRLGSRDTICWNAMI 415

Query: 711 QIYAICGKPEDALKV 725
             Y   G    A+K+
Sbjct: 416 TTYVQNGCAVAAMKI 430


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 255/761 (33%), Positives = 402/761 (52%), Gaps = 84/761 (11%)

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
           LVIK G+      +  +++++ K G +  A R FE +D+K    +++M+ GY +    + 
Sbjct: 71  LVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLET 130

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRS---------------------------------- 267
           A     +M  +++K  V  F  L++                                   
Sbjct: 131 ALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVN 190

Query: 268 -YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            Y +  Q D A +M  RM       D+ +W  +I+GF+QNG   +AL+L   M   G  P
Sbjct: 191 MYAKCRQIDDAYKMFDRMPER----DLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRP 246

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           + +T+ + + A  D+  L +G  IH  A++ GF   V +  +L +MYSKC  +E A  +F
Sbjct: 247 DSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIF 306

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT--------------- 431
           D +  K V SWNSM+ GY Q G   KA  +F KM E  + P  +T               
Sbjct: 307 DGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLE 366

Query: 432 --------------------WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                                N LIS Y +    D A D+F     N+   R   SWN++
Sbjct: 367 RGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIF-----NNLNGRTHVSWNAM 421

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           I GY Q G+ + AL  F +M+S    P+  T++SV+PA A L  +   K IHG ++R  L
Sbjct: 422 ILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCL 481

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
           + ++ V  +L+D Y+K G I  +R +FD +S + +ITWN++I GY  HG   AALDLFD+
Sbjct: 482 DKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDK 541

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           MK   ++PN  T+LS+I A S +G+VD G + F S+ + Y + P ++HY AM+DL GR+G
Sbjct: 542 MKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAG 601

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
           +++EA +FIE+MPI P  +++ A+L AC+IH NI++   A ++LF+L P +     L+  
Sbjct: 602 RIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLAN 661

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN 771
           IYA   K     +VRK   +   + + G   +E++N V++F +G  +   S  +Y++L+ 
Sbjct: 662 IYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEE 721

Query: 772 VPENVTARS----SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRM 827
           +   + A      ++  L +E++ +E++   HSEKLA+AF L+ +S    TI + KN+R+
Sbjct: 722 LVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGT-TIHVRKNLRV 780

Query: 828 CVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           C  CH   KY+S++   EI + D +  HHFKNG CSCGDYW
Sbjct: 781 CGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821



 Score =  239 bits (609), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 152/518 (29%), Positives = 253/518 (48%), Gaps = 39/518 (7%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV 86
           T L     N  L  A+  L  +     K     +  LL+ C D+  +   +++H    L+
Sbjct: 117 TMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG--QLI 174

Query: 87  TE---IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
           T     +VF  T ++++YAKC  +DDA ++F+ M ER+L +W+ +I  +S++   ++ +E
Sbjct: 175 TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALE 234

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           L   M  +G  PD      +L A  + G    GK +H   I+ G + +  +  ++  +Y 
Sbjct: 235 LVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYS 294

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           KCG +  AR  F+ MD+K  V+WNSM+ GY Q GE ++A  +F+KM  E I    VT   
Sbjct: 295 KCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIME 354

Query: 264 LIRSYNQLGQ-----------------CDVA-----MEMVKRMESLGITPDVF------- 294
            + +   LG                   D++     + M  + + + I  D+F       
Sbjct: 355 ALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRT 414

Query: 295 --TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
             +W  MI G+AQNGR S+AL+ F EM  +G+ P+  T+ S I A  +L        IH 
Sbjct: 415 HVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHG 474

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
           L ++     ++ V  +L++MYSKC  +  A ++FDMI D+ V +WN+MI GY   G    
Sbjct: 475 LIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRA 534

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
           A +LF KM++  V PN IT+  +IS    +G  DE +  F+ M ++  ++ +   + +++
Sbjct: 535 ALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMV 594

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               + G+   A      M  S   P      ++L AC
Sbjct: 595 DLLGRAGRIKEAWDFIENMPIS---PGITVYGAMLGAC 629



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 149/609 (24%), Positives = 269/609 (44%), Gaps = 78/609 (12%)

Query: 77  RKLHAFLNLVTEIDVF----VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY 132
           ++LH  + LV +  ++     +TKL+S+++K G +++A  VFE + ++    +  M+  Y
Sbjct: 63  KELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGY 122

Query: 133 SRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR 192
           +++      +     M  D + P  + F  +L+ CG+  D + GK +H  +I    +   
Sbjct: 123 AKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANV 182

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
                V+ +Y KC ++  A + F+ M E+D V+WN++I+G+ Q G   +A  L  +M  E
Sbjct: 183 FAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDE 242

Query: 253 EIKLGVVTF--------------------------------NI---LIRSYNQLGQCDVA 277
             +   +T                                 NI   L   Y++ G  + A
Sbjct: 243 GQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETA 302

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
             +   M+       V +W  M+ G+ QNG   +A+ +F++M   G+ P GVTI  A+ A
Sbjct: 303 RLIFDGMDQ----KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHA 358

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C DL  L  G  +H    ++    D+ V NSLI+MYSKC+ ++ A  +F+ +  +   SW
Sbjct: 359 CADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSW 418

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA--------- 448
           N+MI GY Q G   +A   F +M+   + P+  T   +I    +      A         
Sbjct: 419 NAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIR 478

Query: 449 -------------VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGV 487
                        VD++ + G     +        R+  +WN++I GY   G    AL +
Sbjct: 479 SCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDL 538

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
           F KM+     PN +T LSV+ AC++  +    ++          LE S+    +++D   
Sbjct: 539 FDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLG 598

Query: 547 KSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
           ++G I  +    + M  S  I  + +++    +H           ++  F L P+ G + 
Sbjct: 599 RAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKL--FELNPDEGGY- 655

Query: 606 SIILAHSLA 614
            ++LA+  A
Sbjct: 656 HVLLANIYA 664



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 160/330 (48%), Gaps = 17/330 (5%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF--- 82
           ++ +D    NG   +AI V + +  +G      T +  L AC D   +   + +H F   
Sbjct: 318 NSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQ 377

Query: 83  LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
           LNL ++I V     L+S+Y+KC  +D A ++F ++  R   +W+AMI  Y+++ R  E +
Sbjct: 378 LNLGSDISVM--NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEAL 435

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR---VRNSVL 199
             F  M   G+ PD F    ++ A          K +H L+I+   SC+ +   V  +++
Sbjct: 436 NCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIR---SCLDKNIFVTTALV 492

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +Y KCG +  AR+ F+ + ++  + WN+MI GY   G    A  LFDKM +  ++   +
Sbjct: 493 DMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDI 552

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
           T+  +I + +  G  D  +   K M +  G+ P +  +  M+    + GR  +A D  + 
Sbjct: 553 TYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIEN 612

Query: 319 MSFVGVMPNGVTITSA-ISACTDLKALAMG 347
           M     +  G+T+  A + AC   K + +G
Sbjct: 613 MP----ISPGITVYGAMLGACKIHKNIEVG 638


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 262/879 (29%), Positives = 456/879 (51%), Gaps = 99/879 (11%)

Query: 40   EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLL 98
            EA  + D +   G      T+ + L+ C    S    +++H+ L     + D FV   L+
Sbjct: 259  EAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALI 318

Query: 99   SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
             +YAKC   +   +VF++M ERN  TW+++I A ++   + + + LF  M + G   + F
Sbjct: 319  DMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRF 378

Query: 159  LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
                IL A     D   G+ +H  +++  ++    + ++++ +Y KCG +  A + F S+
Sbjct: 379  NLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSL 438

Query: 219  DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE-------------------------- 252
             E++ V++N++++GY Q G+ +EA  L+  M  E                          
Sbjct: 439  LERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQG 498

Query: 253  -EIKLGVVTFNI---------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
             +I   ++  NI         L+  Y++ G+ + A E+  RM       + ++W  MI G
Sbjct: 499  RQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAE----RNAYSWNSMIEG 554

Query: 303  FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
            + QNG T +AL LFK+M   G+ P+  +++S +S+C  L     G E+H+  V+    ++
Sbjct: 555  YQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEE 614

Query: 363  VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
             ++   L++MY+KC  ++ A +V+D    KDV                            
Sbjct: 615  GILQVVLVDMYAKCGSMDYAWKVYDQTIKKDV---------------------------- 646

Query: 423  SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
                   I  NV++S ++ +G  ++A +LF +M +     RNTA WNS++AGY   G K 
Sbjct: 647  -------ILNNVMVSAFVNSGRANDAKNLFDQMEQ-----RNTALWNSILAGYANKGLKK 694

Query: 483  NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS-LESSLPVMNSL 541
             +   F +M  S    + +T+++++  C+ L A     ++H  ++++  +  S+ +  +L
Sbjct: 695  ESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETAL 754

Query: 542  IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
            +D Y+K G I  +RT+FD M+ K+I++WN++I GY  HG    AL L+++M   G+ PN 
Sbjct: 755  VDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNE 814

Query: 602  GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
             TFL+I+ A S  G+V+ G ++F S+ E Y I    EHY+ M+DL GR+G+LE+A EF+E
Sbjct: 815  VTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVE 874

Query: 662  DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPED 721
             MPIEP+ S W ALL ACR+H ++D+  LA +RLF+L+P +     ++  IYA  G+ ++
Sbjct: 875  KMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKE 934

Query: 722  ALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSS 781
               +R++ +    +   G  WIE+ + +  F  G  +   ++ +Y+ L+    ++T +S 
Sbjct: 935  VEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKTEEIYNNLR----HLTLQSK 990

Query: 782  HSGLCIEE----EEKEEISGI--------HSEKLALAFALIGSSQAPHTIRIVKNIRMCV 829
              G   +     +  ++I           HSE+LAL+  LI S     TIR+ KN+R+C 
Sbjct: 991  GLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLALSLGLI-SLPKKSTIRVFKNLRICG 1049

Query: 830  HCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             CH   K++S +    I   D+   HHF+NG+CSCGDYW
Sbjct: 1050 DCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 1088



 Score =  293 bits (749), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 218/758 (28%), Positives = 360/758 (47%), Gaps = 121/758 (15%)

Query: 47  SIATQGAK-VRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKC 104
           SI T+ A  V    Y +L+Q CIDSNS    + +H   ++     D ++ TK+L +YA+ 
Sbjct: 60  SIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARS 119

Query: 105 GCLDD---AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFP 161
           GCLDD   AR++FE+M ERNL  W+ MI AY+R   + EV+ L+  M   G F D F FP
Sbjct: 120 GCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFP 179

Query: 162 KILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK 221
            +++AC    D    + + S V+K G++C   V  +++  Y + G   W      S+DE 
Sbjct: 180 SVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFG---WMDDAVTSLDEI 236

Query: 222 DG---VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV----VTFNILIRSYNQLGQC 274
           +G   V WN++I+GY +I   +EA  +FD+M    +K+GV     TF   +R    L   
Sbjct: 237 EGTSVVTWNAVIAGYVKILSWEEAWGIFDRM----LKIGVCPDNFTFASALRVCGALRSR 292

Query: 275 DVAMEMVKRMESLGITPDVF-------------------------------TWTCMISGF 303
           D   ++  ++ + G   D F                               TW  +IS  
Sbjct: 293 DGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAE 352

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
           AQ G  + AL LF  M   G   N   + S + A   L  +  G E+H   V+     D+
Sbjct: 353 AQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDI 412

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
           ++G++L++MYSKC  +E A +VF  + +++  S+N+++AGY Q G   +A EL+  MQ  
Sbjct: 413 ILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSE 472

Query: 424 D-VPPNVITWNVLIS--GYIQNGN--------------------EDEAVDLFQRMGK--- 457
           D + P+  T+  L++     +N N                    E E V ++   G+   
Sbjct: 473 DGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNY 532

Query: 458 -----NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
                N   +RN  SWNS+I GYQQ G+   AL +F++MQ +   P+C ++ S+L +C  
Sbjct: 533 AKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVS 592

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 572
           L  S K +E+H  ++R ++E    +   L+D YAK G++ Y+  ++D    KD+I  N +
Sbjct: 593 LSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVM 652

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-- 630
           +  +V  G  + A +LFDQM+    + N   + SI+  ++  G+       F  + E   
Sbjct: 653 VSAFVNSGRANDAKNLFDQME----QRNTALWNSILAGYANKGLKKESFNHFLEMLESDI 708

Query: 631 -YQI------------IPMIEH--------------------YSAMIDLYGRSGKLEEAM 657
            Y +            +P +EH                     +A++D+Y + G + +A 
Sbjct: 709 EYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKAR 768

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
              ++M  +   S W A+++    HG    A++  E +
Sbjct: 769 TVFDNMNGKNIVS-WNAMISGYSKHGCSKEALILYEEM 805



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 143/545 (26%), Positives = 253/545 (46%), Gaps = 78/545 (14%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVFV 93
           G  N+A+ +   +   G K  R    ++L A      I   R+LH  L  NL+   D+ +
Sbjct: 356 GHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNS-DIIL 414

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM-VQDG 152
            + L+ +Y+KCG +++A +VF  + ERN  +++A++  Y ++ +  E +EL+  M  +DG
Sbjct: 415 GSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDG 474

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + PD F F  +L  C N  +   G+ +H+ +I+  ++    V   ++ +Y +CG+L +A+
Sbjct: 475 IQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAK 534

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN---------- 262
             F  M E++  +WNSMI GY Q GE  EA RLF +M    IK    + +          
Sbjct: 535 EIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLS 594

Query: 263 -------------------------ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                    +L+  Y + G  D A ++  +     I  DV    
Sbjct: 595 DSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQT----IKKDVILNN 650

Query: 298 CMISGFAQNGRTSQALDLFKEMS----------FVGVMPNG------------------- 328
            M+S F  +GR + A +LF +M             G    G                   
Sbjct: 651 VMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEY 710

Query: 329 --VTITSAISACTDLKALAMGMEIHSLAVKMGFTD-DVLVGNSLINMYSKCEELEAAERV 385
             +T+ + ++ C+ L AL  G ++HSL +K GF +  V++  +L++MYSKC  +  A  V
Sbjct: 711 DVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTV 770

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
           FD +  K++ SWN+MI+GY + G   +A  L+ +M +  + PN +T+  ++S     G  
Sbjct: 771 FDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLV 830

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           +E + +F  M ++  ++     +  ++    + G+  +A     KM      P   T  +
Sbjct: 831 EEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMP---IEPEVSTWGA 887

Query: 506 VLPAC 510
           +L AC
Sbjct: 888 LLGAC 892



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 178/397 (44%), Gaps = 44/397 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           NG   EA+ +   +   G K    +  ++L +C+  +     R+LH F+   T E +  +
Sbjct: 558 NGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGIL 617

Query: 94  KTKLLSVYAKCGCLD-------------------------------DAREVFEDMRERNL 122
           +  L+ +YAKCG +D                               DA+ +F+ M +RN 
Sbjct: 618 QVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNT 677

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
             W++++  Y+     +E    F  M++  +  D      I+  C +    E G  +HSL
Sbjct: 678 ALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSL 737

Query: 183 VIKLG-MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
           +IK G ++C   +  +++ +Y KCG +  AR  F++M+ K+ V+WN+MISGY + G + E
Sbjct: 738 IIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKE 797

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMI 300
           A  L+++M ++ +    VTF  ++ + +  G  +  + +   M E   I      +TCM+
Sbjct: 798 ALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMV 857

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
               + GR   A +  ++M    + P   T  + + AC   K + MG     LA +  F 
Sbjct: 858 DLLGRAGRLEDAKEFVEKMP---IEPEVSTWGALLGACRVHKDMDMG----RLAAQRLFE 910

Query: 361 DDVLVGNSLI---NMYSKCEELEAAERVFDMIKDKDV 394
            D       +   N+Y+     +  E +  M+K K V
Sbjct: 911 LDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGV 947


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 266/803 (33%), Positives = 419/803 (52%), Gaps = 94/803 (11%)

Query: 76  ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           ARKL   + L T    F    +LS YAK G +D + E F+ + +R+  +W+ MI  Y   
Sbjct: 68  ARKLFDEMPLRT---AFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNI 124

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
            ++ + + +   M+++G+ P  F    +L +       E GK +HS ++KLG+     V 
Sbjct: 125 GQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVS 184

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           NS+L +Y KCG  + A+                                +FD+M  ++I 
Sbjct: 185 NSLLNMYAKCGDPMMAKV-------------------------------VFDRMVVKDIS 213

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
               ++N +I  + Q+GQ D+AM   ++M       D+ TW  MISG+ Q G   +ALD+
Sbjct: 214 ----SWNAMIALHMQVGQMDLAMAQFEQMAE----RDIVTWNSMISGYNQRGYDLRALDM 265

Query: 316 FKEMSFVGVM-PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
           F +M    ++ P+  T+ S +SAC +L+ L +G +IHS  V  GF    +V N+LI+MYS
Sbjct: 266 FSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYS 325

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           +C  +E A R+ +    KD+      I G+                              
Sbjct: 326 RCGGVETARRLIEQRGTKDL-----KIEGF----------------------------TA 352

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           L+ GYI+ G+ +EA ++F  +   D V     +W ++I GY+Q G    A+ +FR M   
Sbjct: 353 LLDGYIKLGDMNEAKNIFDSLKDRDVV-----AWTAMIVGYEQHGLYGEAINLFRSMVGE 407

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              PN  T+ ++L   + L +    K+IHG  ++     S+ V N+LI  YAK+G+I  +
Sbjct: 408 EQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGSITSA 467

Query: 555 RTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
              FD +   +D ++W S+I     HG    AL+LF+ M   GL+P+  T++ +  A + 
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH 527

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           AG+V+ G++ F  + +  +IIP + HY+ M+DL+GR+G L+EA EFIE MPIEPD   W 
Sbjct: 528 AGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWG 587

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
           +LL+ACR++ NIDL  +A ERL  LEP +      +  +Y+ CGK E+A K+RK  ++  
Sbjct: 588 SLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGR 647

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--------TARSSHSGL 785
            +   G  WIEVK+ V+ F          + +Y  ++ + + +        TA   H   
Sbjct: 648 VKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKMGYVPDTASVLHD-- 705

Query: 786 CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCE 845
            +EEE KE+I   HSEKLA+AF LI S+    T+RI+KN+R+C  CH   K++S +   E
Sbjct: 706 -LEEEVKEQILRHHSEKLAIAFGLI-STPDKTTLRIMKNLRVCNDCHTAIKFISKLVGRE 763

Query: 846 IFLADSKCLHHFKNGQCSCGDYW 868
           I + D+   HHFK+G CSC DYW
Sbjct: 764 IIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/554 (25%), Positives = 262/554 (47%), Gaps = 62/554 (11%)

Query: 155 PDDFLFPKILQACGNC---------GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
           P       +L+ C N          G F A +L+H  VIK G+     + N+++ VY K 
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTA-QLVHCRVIKSGLVFSVYLMNNLMNVYSKT 62

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G  + AR+ F+ M  +   +WN+++S Y + G+ D +   FD++ + +     V++  +I
Sbjct: 63  GYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRD----SVSWTTMI 118

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             Y  +GQ   A+ ++  M   GI P  F                               
Sbjct: 119 VGYKNIGQYHKAIRIMGEMMREGIEPSQF------------------------------- 147

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
               T+T+ +++    + L  G ++HS  VK+G   +V V NSL+NMY+KC +   A+ V
Sbjct: 148 ----TLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVV 203

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
           FD +  KD+ SWN+MIA + Q G    A   F +M E D    ++TWN +ISGY Q G +
Sbjct: 204 FDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERD----IVTWNSMISGYNQRGYD 259

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV---T 502
             A+D+F +M ++  +  +  +  S+++    L +      +   + ++ F  + +    
Sbjct: 260 LRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNA 319

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
           ++S+   C  +  + ++ E  G     + +  +    +L+D Y K G++  ++ IFD + 
Sbjct: 320 LISMYSRCGGVETARRLIEQRG-----TKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLK 374

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            +D++ W ++I GY  HG +  A++LF  M     +PN  T  +++   S    +  GK+
Sbjct: 375 DRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQ 434

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
           +  S  +  +I   +   +A+I +Y ++G +  A    + +  E D+  W +++ A   H
Sbjct: 435 IHGSAVKSGEIYS-VSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQH 493

Query: 683 GNIDLAVLAIERLF 696
           G+ + A+   E + 
Sbjct: 494 GHAEEALELFETML 507



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 228/511 (44%), Gaps = 78/511 (15%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           G+ ++AI ++  +  +G +  + T  N+L +   +  +   +K+H+F+  L    +V V 
Sbjct: 125 GQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVS 184

Query: 95  TKLLSVYAKC-------------------------------GCLDDAREVFEDMRERNLY 123
             LL++YAKC                               G +D A   FE M ER++ 
Sbjct: 185 NSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSL 182
           TW++MI  Y++       +++F  M++D +  PD F    +L AC N      G+ +HS 
Sbjct: 245 TWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSH 304

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV--AWNSMISGYFQIGEND 240
           ++  G      V N+++++Y +CG +  ARR  E    KD     + +++ GY ++G+ +
Sbjct: 305 IVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMN 364

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
           EA  +FD +   ++                                         WT MI
Sbjct: 365 EAKNIFDSLKDRDV---------------------------------------VAWTAMI 385

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
            G+ Q+G   +A++LF+ M      PN  T+ + +S  + L +L  G +IH  AVK G  
Sbjct: 386 VGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEI 445

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             V V N+LI MY+K   + +A R FD+I+ ++D  SW SMI    Q G+  +A ELF  
Sbjct: 446 YSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M    + P+ IT+  + S     G  ++    F  M   DK+    + +  ++  + + G
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               A     KM      P+ VT  S+L AC
Sbjct: 566 LLQEAQEFIEKMP---IEPDVVTWGSLLSAC 593



 Score = 42.7 bits (99), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 22/106 (20%), Positives = 55/106 (51%), Gaps = 9/106 (8%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV 91
           L  +G   EA+ + +++  +G +    TY+ +  AC  +  ++  R+   + +++ ++D 
Sbjct: 490 LAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ---YFDMMKDVDK 546

Query: 92  FVKTK-----LLSVYAKCGCLDDAREVFEDMR-ERNLYTWSAMIGA 131
            + T      ++ ++ + G L +A+E  E M  E ++ TW +++ A
Sbjct: 547 IIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 265/846 (31%), Positives = 440/846 (52%), Gaps = 68/846 (8%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI------- 89
           +LN+  + L S        +    +++L+       +H    L  F  +++++       
Sbjct: 17  KLNQLSSALKSTFNHKPTFKPTITLSILET-----HLHNCHNLKQFNRILSQMILTGFIS 71

Query: 90  DVFVKTKLL--SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           D F  ++LL  S  +    LD + ++F+ +   N + W+ M+ AY +     + + L+ L
Sbjct: 72  DTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKL 131

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           MV++ + PD++ +P ++QAC        GK +H  V+K+G      V+N+++ +Y  CG 
Sbjct: 132 MVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGN 191

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           +  AR+ F+     D V+WNS+++GY + G+ +EA  +FD+M +  I    V  N +I  
Sbjct: 192 MRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNI----VASNSMIVL 247

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
             ++GQ   A ++   M+      D+ +W+ +ISG+ QNG   +AL +F EM+  G+  +
Sbjct: 248 LGKMGQVMEAWKLFNEMDE----KDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLD 303

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            V + S +SAC  L  +  G  IH L ++MG    V + N+LI+MYS   E+  A+++F+
Sbjct: 304 EVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFN 363

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
              + D  SWNSMI+G  + G   KA  LF  M E D    +++W+ +ISGY Q+    E
Sbjct: 364 GSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKD----IVSWSAVISGYAQHDCFSE 419

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
            + LF  M                     QLGQ                 P+   ++SV+
Sbjct: 420 TLALFHEM---------------------QLGQ---------------IRPDETILVSVI 443

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
            AC +L A ++ K +H  + +  L+ ++ +  +L+D Y K G +  +  +F+GM  K + 
Sbjct: 444 SACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVS 503

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
           +WN+LI G  ++G    +LD+F +MK+ G+ PN  TF+ ++ A    G+VD G+  F S+
Sbjct: 504 SWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASM 563

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
            E + I P ++HY  M+DL GR+G L EA + IE MP+ PD + W ALL AC+ HG+ ++
Sbjct: 564 IEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEM 623

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
                 +L +L+P       L+  I+A  G  ED L+VR + ++     + G   IE   
Sbjct: 624 GERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANG 683

Query: 748 LVYTFVTGGWSESYSDLLYSWLQNVP-----ENVTARSSHSGLCIEEEEKEEISGIHSEK 802
           +V+ F+ G  +  + + +   L  +      E     ++   L I+EEEKE     HSEK
Sbjct: 684 VVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEK 743

Query: 803 LALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQC 862
           LA+AF L+  S  P  IRI+KN+R+C  CH  AK +S  +  EI + D    H+FK G C
Sbjct: 744 LAIAFGLLTIS-PPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGAC 802

Query: 863 SCGDYW 868
           SC DYW
Sbjct: 803 SCMDYW 808



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/483 (25%), Positives = 234/483 (48%), Gaps = 59/483 (12%)

Query: 32  LCGNGR----LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT 87
           +CGN R    L +   VLDS+          ++ ++L   +    +  A+ +    + + 
Sbjct: 188 VCGNMRDARKLFDESPVLDSV----------SWNSILAGYVKKGDVEEAKLI---FDQMP 234

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + ++     ++ +  K G + +A ++F +M E+++ +WSA+I  Y ++  + E + +F  
Sbjct: 235 QRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIE 294

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M  +G+  D+ +   +L AC +    + GK++H LVI++G+     ++N+++ +Y   G+
Sbjct: 295 MNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGE 354

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           ++ A++ F      D ++WNSMISG  + G  ++A  LFD M  +               
Sbjct: 355 IMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEK--------------- 399

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
                                   D+ +W+ +ISG+AQ+   S+ L LF EM    + P+
Sbjct: 400 ------------------------DIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPD 435

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
              + S ISACT L AL  G  +H+   K G   +V++G +L++MY KC  +E A  VF+
Sbjct: 436 ETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFN 495

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
            +++K V SWN++I G    G   ++ ++F +M+ + V PN IT+  ++      G  DE
Sbjct: 496 GMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDE 555

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
               F  M +   ++ N   +  ++    + G  N A  +   M  +   P+  T  ++L
Sbjct: 556 GRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMA---PDVATWGALL 612

Query: 508 PAC 510
            AC
Sbjct: 613 GAC 615


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 268/803 (33%), Positives = 419/803 (52%), Gaps = 94/803 (11%)

Query: 76  ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           ARKL   + L T    F    +LS Y+K G +D   E F+ + +R+  +W+ MI  Y   
Sbjct: 68  ARKLFDEMPLRT---AFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNI 124

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
            ++ + + +   MV++G+ P  F    +L +       E GK +HS ++KLG+     V 
Sbjct: 125 GQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           NS+L +Y KCG  + A+                                +FD+M   +I 
Sbjct: 185 NSLLNMYAKCGDPMMAKF-------------------------------VFDRMVVRDIS 213

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
               ++N +I  + Q+GQ D+AM   ++M       D+ TW  MISGF Q G   +ALD+
Sbjct: 214 ----SWNAMIALHMQVGQMDLAMAQFEQMAE----RDIVTWNSMISGFNQRGYDLRALDI 265

Query: 316 FKEMSFVGVM-PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
           F +M    ++ P+  T+ S +SAC +L+ L +G +IHS  V  GF    +V N+LI+MYS
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           +C  +E A R+ +    KD+      I G+                              
Sbjct: 326 RCGGVETARRLIEQRGTKDL-----KIEGF----------------------------TA 352

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           L+ GYI+ G+ ++A ++F  +   D V     +W ++I GY+Q G    A+ +FR M   
Sbjct: 353 LLDGYIKLGDMNQAKNIFVSLKDRDVV-----AWTAMIVGYEQHGSYGEAINLFRSMVGG 407

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              PN  T+ ++L   + L + +  K+IHG  ++     S+ V N+LI  YAK+GNI  +
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSA 467

Query: 555 RTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
              FD +   +D ++W S+I     HG    AL+LF+ M   GL+P+  T++ +  A + 
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH 527

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           AG+V+ G++ F  + +  +IIP + HY+ M+DL+GR+G L+EA EFIE MPIEPD   W 
Sbjct: 528 AGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWG 587

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
           +LL+ACR+H NIDL  +A ERL  LEP +      +  +Y+ CGK E+A K+RK  ++  
Sbjct: 588 SLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGR 647

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--------TARSSHSGL 785
            +   G  WIEVK+ V+ F     +    + +Y  ++ + + +        TA   H   
Sbjct: 648 VKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHD-- 705

Query: 786 CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCE 845
            +EEE KE+I   HSEKLA+AF LI S+    T+RI+KN+R+C  CH   K++S +   E
Sbjct: 706 -LEEEVKEQILRHHSEKLAIAFGLI-STPDKTTLRIMKNLRVCNDCHTAIKFISKLVGRE 763

Query: 846 IFLADSKCLHHFKNGQCSCGDYW 868
           I + D+   HHFK+G CSC DYW
Sbjct: 764 IIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 226/511 (44%), Gaps = 78/511 (15%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           G+ ++AI V+  +  +G +  + T  N+L +   +  +   +K+H+F+  L    +V V 
Sbjct: 125 GQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184

Query: 95  TKLLSVYAKC-------------------------------GCLDDAREVFEDMRERNLY 123
             LL++YAKC                               G +D A   FE M ER++ 
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSL 182
           TW++MI  +++       +++F  M++D L  PD F    +L AC N      GK +HS 
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH 304

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV--AWNSMISGYFQIGEND 240
           ++  G      V N+++++Y +CG +  ARR  E    KD     + +++ GY ++G+ +
Sbjct: 305 IVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMN 364

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
           +A  +F  +   +    VV +  +I  Y Q G    A+ + +                M+
Sbjct: 365 QAKNIFVSLKDRD----VVAWTAMIVGYEQHGSYGEAINLFR---------------SMV 405

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
            G                    G  PN  T+ + +S  + L +L+ G +IH  AVK G  
Sbjct: 406 GG--------------------GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             V V N+LI MY+K   + +A R FD+I+ ++D  SW SMI    Q G+  +A ELF  
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M    + P+ IT+  + S     G  ++    F  M   DK+    + +  ++  + + G
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               A     KM      P+ VT  S+L AC
Sbjct: 566 LLQEAQEFIEKMP---IEPDVVTWGSLLSAC 593



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/237 (21%), Positives = 108/237 (45%), Gaps = 41/237 (17%)

Query: 498 PNCVTILSVLPACAYLVASNKVKE--------IHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           P  +++ ++L  C  L+  +  K         +H  V++  L  S+ +MN+L++ Y+K+G
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63

Query: 550 NIVYSRTIFDGM-------------------------------SSKDIITWNSLICGYVL 578
             +++R +FD M                                 +D ++W ++I GY  
Sbjct: 64  YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
            G +H A+ +   M   G++P + T  +++ + +    ++ GKKV   I +   +   + 
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKL-GLRGNVS 182

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
             ++++++Y + G    A +F+ D  +  D S W A++      G +DLA+   E++
Sbjct: 183 VSNSLLNMYAKCGDPMMA-KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM 238



 Score = 42.7 bits (99), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 22/106 (20%), Positives = 55/106 (51%), Gaps = 9/106 (8%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV 91
           L  +G   EA+ + +++  +G +    TY+ +  AC  +  ++  R+   + +++ ++D 
Sbjct: 490 LAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ---YFDMMKDVDK 546

Query: 92  FVKTK-----LLSVYAKCGCLDDAREVFEDMR-ERNLYTWSAMIGA 131
            + T      ++ ++ + G L +A+E  E M  E ++ TW +++ A
Sbjct: 547 IIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 275/888 (30%), Positives = 462/888 (52%), Gaps = 92/888 (10%)

Query: 65  QACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           QA      I L RK+H  ++    +  D  + T+++++Y+ CG  DD+R VF+ +R++NL
Sbjct: 89  QASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNL 148

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMV-QDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
           + W+A+I +YSR++ +  V+E+F  M+ + GL PD+F FP +++AC    + + G  +H 
Sbjct: 149 FQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHG 208

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
           LV+K  +     V N++++ Y   G +  A R F+ M E++ V+WNSMI  +   G ++E
Sbjct: 209 LVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEE 268

Query: 242 AHRLFDKM----------------------CREEIKLGV-----------------VTFN 262
              L  +M                      C  + ++GV                 V  N
Sbjct: 269 CFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNN 328

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            L+  Y++ G  + A  + K    L    +V +W  M+ GF+  G   +  DL ++M   
Sbjct: 329 ALMDMYSKCGCINDAQVIFK----LNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAG 384

Query: 323 G--VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT-DDVLVGNSLINMYSKCEEL 379
           G  +  + VTI +A+  C +   L    E+H  ++K  F  ++ LV N+ +  Y+KC  L
Sbjct: 385 GGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSL 444

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG- 438
             A RVF  I+ K V SWN++I GY Q+     + + + +M+ S + P++ T   L+S  
Sbjct: 445 SYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSAC 504

Query: 439 ----YIQNGNEDEAVDLFQRMGKNDKV-------------------------KRNTASWN 469
                ++ G E   + +  R+ ++  V                          +   SWN
Sbjct: 505 SQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWN 564

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           +++ GY Q G    AL +FR+M      P  ++++SV  AC+ L +    +E HG  L+ 
Sbjct: 565 TMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKC 624

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            LE +  +  S+ID YAK+G+++ S  +F+G+  + + +WN+++ GY +HG    A+ LF
Sbjct: 625 LLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLF 684

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
           ++M+  G  P+  TFL ++ A + +G+V  G      +   + + P ++HY+ +ID+  R
Sbjct: 685 EEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVR 744

Query: 650 SGKLEEAMEF-IEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           +GKL+EA++   E+M  EP   IW  LL++CRIH N+++      +LF  EP       L
Sbjct: 745 AGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVL 804

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG-----GWSESYSD 763
           +  +YA  GK ++  KVR+  +E + R   G  WIE+   V++FV G     G+ E  S 
Sbjct: 805 LSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKS- 863

Query: 764 LLYSWLQNVPENVTARSSHSGL---CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIR 820
            L+S L+     +  R   S +     EEE+ E++ G HSEKLA+ + LI +S+   T+R
Sbjct: 864 -LWSVLEREIGKMGYRPDTSSVQHDLSEEEKTEQLRG-HSEKLAITYGLIRTSEGT-TLR 920

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           + KN+R+CV CH  AK +S +   EI + D+K  HHFKNG CSCGDYW
Sbjct: 921 VYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGFCSCGDYW 968



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 202/436 (46%), Gaps = 43/436 (9%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T   +L  C     I + + +H   + L  + +V V   L+ +Y+KCGC++DA+ +F+  
Sbjct: 291 TLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLN 350

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG--LFPDDFLFPKILQACGNCGDFEA 175
             +N+ +W+ M+G +S      +  +L   M+  G  L  D+      +  C        
Sbjct: 351 NNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPN 410

Query: 176 GKLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY- 233
            K +H   +K   +     V N+ +A Y KCG L +A R F S+  K   +WN++I GY 
Sbjct: 411 LKELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYS 470

Query: 234 ------------FQIGENDEAHRLFD-----KMCRE--EIKLGVVTFNILIRS------- 267
                       FQ+  +     LF        C +   +KLG     ++IR+       
Sbjct: 471 QSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSF 530

Query: 268 --------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
                   Y   G+   A  +   ME       + +W  M++G+ QNG   +AL LF++M
Sbjct: 531 VYISLLSLYIHCGELSTAHVLFDAMED----KTLVSWNTMVNGYLQNGFPERALSLFRQM 586

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
              GV P  +++ S   AC+ L +L +G E H  A+K    D+  +  S+I+MY+K   +
Sbjct: 587 VLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSV 646

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
             + +VF+ +K++ V SWN+M+ GY   G   +A +LF +MQ +   P+ +T+  +++  
Sbjct: 647 MESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTAC 706

Query: 440 IQNGNEDEAVDLFQRM 455
             +G   E +    +M
Sbjct: 707 NHSGLVHEGLTYLDQM 722



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 223/500 (44%), Gaps = 47/500 (9%)

Query: 36  GRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFLNLVTEI---D 90
           G +++   +L  +   G  +R +  T +N +  C + + +   ++LH + +L  E    +
Sbjct: 369 GDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCY-SLKQEFVHNN 427

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
             V    ++ YAKCG L  A  VF  +R + + +W+A+IG YS+    R  ++ +F M  
Sbjct: 428 ELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKS 487

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            GL PD F    +L AC      + GK +H L+I+  +     V  S+L++Y+ CG+L  
Sbjct: 488 SGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELST 547

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-------CR------------ 251
           A   F++M++K  V+WN+M++GY Q G  + A  LF +M       C             
Sbjct: 548 AHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSL 607

Query: 252 -EEIKLGVVTFNILIRSY---NQLGQCDVAMEMVKR---MESLGI-----TPDVFTWTCM 299
              ++LG       ++     N    C V     K    MES  +        V +W  M
Sbjct: 608 LPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAM 667

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMG 358
           + G+  +GR  +A+ LF+EM   G  P+ +T    ++AC     +  G+  +  +    G
Sbjct: 668 VMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFG 727

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVF--DMIKDKDVYSWNSMIAGYCQAGY---CGKA 413
               +     +I+M  +  +L+ A ++   +M ++  V  WN +++  C+       G+ 
Sbjct: 728 MNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSS-CRIHKNLEMGEK 786

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
               + + E + P N +  + L +G   +G  DE   + QRM +    K    SW  L  
Sbjct: 787 IAAKLFVSEPEKPENYVLLSNLYAG---SGKWDEVRKVRQRMKEMSLRKDAGCSWIELNG 843

Query: 474 GYQQLGQKNNALGVFRKMQS 493
                    ++L  F +++S
Sbjct: 844 KVFSFVAGESSLDGFEEIKS 863



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 126/267 (47%), Gaps = 15/267 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG    A+++   +   G +    + +++  AC    S+ L R+ H + L  + E + F+
Sbjct: 573 NGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFI 632

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              ++ +YAK G + ++ +VF  ++ER++ +W+AM+  Y    R +E ++LF  M + G 
Sbjct: 633 ACSVIDMYAKNGSVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGH 692

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD+  F  +L AC + G    G   +  +    GM+   +    V+ + V+ GKL  A 
Sbjct: 693 CPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEAL 752

Query: 213 RF-FESMDEKDGVA-WNSMISG-----YFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           +   E M E+ GV  WN ++S        ++GE   A     +  + E       + +L 
Sbjct: 753 KIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPE------NYVLLS 806

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPD 292
             Y   G+ D   ++ +RM+ + +  D
Sbjct: 807 NLYAGSGKWDEVRKVRQRMKEMSLRKD 833


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 264/863 (30%), Positives = 427/863 (49%), Gaps = 106/863 (12%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T++ +L +C     +   R LH  +     E D  V   L+S+Y KC  L DAR VFE M
Sbjct: 9   TFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM 68

Query: 118 --RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
             R+RN+ +W+AMI AY+++    E + L++ M   GL  D   F  +L   G C     
Sbjct: 69  DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVL---GACSSLAQ 125

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G+ +H+ V   G+   + + N+++ +Y + G +  A+R F+S+  +D  +WN++I  + Q
Sbjct: 126 GREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQ 185

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTF---------------------------------- 261
            G+   A R+F +M + ++K    T+                                  
Sbjct: 186 SGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVV 244

Query: 262 -NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
              LI  Y + G    A E+  +M+      D+ +W  MI  +  NG   +AL+L++++ 
Sbjct: 245 ATALINMYGKCGSSHEAREVFDKMKK----RDMVSWNVMIGCYVLNGDFHEALELYQKLD 300

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
             G      T  S + AC+ +KALA G  +HS  ++ G   +V V  +L+NMY+KC  LE
Sbjct: 301 MEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLE 360

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
            A +VF+ +K++D                                    + W+ LI  Y 
Sbjct: 361 EARKVFNAMKNRDA-----------------------------------VAWSTLIGAYA 385

Query: 441 QNG---NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC-F 496
            NG   +  +A  +F R+G      R+T SWN++I  Y Q G    A+ +FR+M  +   
Sbjct: 386 SNGYGKDARKARKVFDRLGS-----RDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGL 440

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            P+ VT ++VL ACA L   ++VK +H  +    LES++ V N+LI+ YA+ G++  +  
Sbjct: 441 KPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAER 500

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           +F     K +++W +++  +  +G +  ALDLF +M   G+KP+  T+ SI+   +  G 
Sbjct: 501 LFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGS 560

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           ++ G + F  + E + + P  +H++AM+DL GRSG+L +A E +E MP EPD   W   L
Sbjct: 561 LEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFL 620

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
           TACRIHG ++L   A ER+++L+P        +  IYA  G  E    VRK   E   + 
Sbjct: 621 TACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKK 680

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPENVTARSSHSGLC 786
             G  +IEV   ++ F +GG     +D +   L            VP+  T    H    
Sbjct: 681 LPGLSFIEVDGKLHEFSSGGKYHPRTDEICEELTRLHGLMRAAGYVPD--TKAVLHD--- 735

Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
           + E EKE +   HSEK+A+AF L+ S  +   IR+VKN+R+C  CH   K+++ +   +I
Sbjct: 736 VSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVVKNLRVCSDCHTATKFIARIAGRDI 795

Query: 847 FLADSKCLHHF-KNGQCSCGDYW 868
            + D    H F  +G+CSCGDYW
Sbjct: 796 IVRDCNRFHRFSSDGKCSCGDYW 818



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 147/646 (22%), Positives = 269/646 (41%), Gaps = 117/646 (18%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF-- 92
           NG   EA+ +   +  QG      T++++L AC   +S+   R++H  +   + +D F  
Sbjct: 88  NGHSTEALVLYWRMNLQGLGTDHVTFVSVLGAC---SSLAQGREIHNRV-FYSGLDSFQS 143

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           +   L+++YA+ G + DA+ +F+ ++ R+  +W+A+I A+S+   W   + +F  M  D 
Sbjct: 144 LANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD- 202

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P+   +  ++           G+ +H+ ++  G      V  +++ +Y KCG    AR
Sbjct: 203 VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEAR 262

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------- 261
             F+ M ++D V+WN MI  Y   G+  EA  L+ K+  E  K    TF           
Sbjct: 263 EVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVK 322

Query: 262 ------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                     L+  Y + G  + A ++   M++     D   W+
Sbjct: 323 ALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKN----RDAVAWS 378

Query: 298 CMISGFA----------------------------------QNGRTSQALDLFKEMS-FV 322
            +I  +A                                  QNG    A+ +F+EM+   
Sbjct: 379 TLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAA 438

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           G+ P+ VT  + + AC  L  L+    +H+   +     +V+V N+LINMY++C  LE A
Sbjct: 439 GLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEA 498

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
           ER+F   K+K V SW +M+A + Q G   +A +LF +M    V P+ +T+  ++      
Sbjct: 499 ERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHG 558

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G+ ++    F  M +   +      + +++     LG+          ++S  F P+ V 
Sbjct: 559 GSLEQGWRYFTDMAELHALAPTADHFAAMV---DLLGRSGRLFDAKELLESMPFEPDPVA 615

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
            ++ L AC           IHG                 ++    +   VY     D  S
Sbjct: 616 WMTFLTAC----------RIHG----------------KLELGEAAAERVYE---LDPSS 646

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG-TFLSI 607
           +   I  +++   Y  HG W     +  +M+  GLK   G +F+ +
Sbjct: 647 TAPYIAMSNI---YAAHGMWEKVASVRKKMEERGLKKLPGLSFIEV 689



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 209/435 (48%), Gaps = 44/435 (10%)

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P+ VT  + + +C+    +  G  +H       F  D +VGN+LI+MY KC+ L  A  V
Sbjct: 5   PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64

Query: 386 FDMI--KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW----------- 432
           F+ +  + ++V SWN+MIA Y Q G+  +A  L+ +M    +  + +T+           
Sbjct: 65  FESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA 124

Query: 433 ---------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                                N L++ Y + G+  +A  +FQ +   D+      SWN++
Sbjct: 125 QGREIHNRVFYSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDET-----SWNAV 179

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           I  + Q G  + AL +F++M+     PN  T ++V+   +      + ++IH  ++    
Sbjct: 180 ILAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
           ++ L V  +LI+ Y K G+   +R +FD M  +D+++WN +I  YVL+G +H AL+L+ +
Sbjct: 239 DTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQK 298

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           +   G K  + TF+SI+ A S    +  G+ V   I E   +   +   +A++++Y + G
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILE-RGLDSEVAVATALVNMYAKCG 357

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD-LEPGDVLIQRLIL 710
            LEEA +    M    D+  W  L+ A   +G    A  A  ++FD L   D +    ++
Sbjct: 358 SLEEARKVFNAMK-NRDAVAWSTLIGAYASNGYGKDARKA-RKVFDRLGSRDTISWNAMI 415

Query: 711 QIYAICGKPEDALKV 725
             Y   G    A+K+
Sbjct: 416 TTYVQNGCAVAAMKI 430


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 260/833 (31%), Positives = 423/833 (50%), Gaps = 85/833 (10%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           ++++F++  ++ L   + ++  +SR+ + +E + LF  + + G   D      +L+ CG 
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
             D   GK +H   IK G      V  S++ +Y+K   +    R F+ M  K+ V+W S+
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           ++GY Q G N++A +LF +M  E IK    TF  ++      G  +  +++   +   G+
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGL 224

Query: 290 TPDVF-------------------------------TWTCMISGFAQNGRTSQALDLFKE 318
              +F                               +W  MI+GF  NG   +A +LF  
Sbjct: 225 DSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYR 284

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   GV        + I  C ++K ++   ++H   +K G   D+ +  +L+  YSKC E
Sbjct: 285 MRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSE 344

Query: 379 LEAAERVFDMIKD-KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           ++ A ++F M+   ++V SW ++I+GY Q G   +A  LF +M+   V PN  T++ +++
Sbjct: 345 IDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILT 404

Query: 438 G-------------------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                           Y + G+ +EA  +F+ + + D V     
Sbjct: 405 ANAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIV----- 459

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS-NKVKEIHGC 525
           +W+++++GY Q+G    A+ +F ++      PN  T  SVL ACA   AS  + K+ H C
Sbjct: 460 AWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSC 519

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
            ++    ++L V ++L+  YAK GNI  +  +F     +D+++WNS+I GY  HG    +
Sbjct: 520 SIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKS 579

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           L +F++M+S  L+ +  TF+ +I A + AG+V+ G++ F  + + Y I+P +EHYS M+D
Sbjct: 580 LKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVD 639

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           LY R+G LE+AM+ I  MP    ++IW  LL ACR+H N+ L  LA E+L  L+P D   
Sbjct: 640 LYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAA 699

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
             L+  IYA  G  ++  KVRKL      +   G  WIEVKN  ++F+ G  S   SD +
Sbjct: 700 YVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRI 759

Query: 766 YSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAP 816
           Y  L    E ++ R   +G           +EEE KE I   HSE+LA+AF LI +   P
Sbjct: 760 YLKL----EELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIAT--PP 813

Query: 817 HT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            T I+IVKN+R+C  CH   K +S +   +I + DS   HHFK G CSCGDYW
Sbjct: 814 GTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/563 (25%), Positives = 275/563 (48%), Gaps = 85/563 (15%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DV V T L+ +Y K   ++D   VF++MR +N+ +W++++  Y ++    + ++LF  M 
Sbjct: 126 DVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQ 185

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            +G+ P+ F F  +L      G  E G  +H++VIK G+     V NS++ +Y K   + 
Sbjct: 186 LEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVS 245

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR--- 266
            A+  F+SM+ ++ V+WNSMI+G+   G + EA  LF +M  E +KL    F  +I+   
Sbjct: 246 DAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCA 305

Query: 267 --------------------------------SYNQLGQCDVAMEMVKRMESLGITPDVF 294
                                           +Y++  + D A ++   M  +    +V 
Sbjct: 306 NIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGV---QNVV 362

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +WT +ISG+ QNGRT +A++LF +M   GV PN  T ++ ++A     A     +IH+L 
Sbjct: 363 SWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA----NAAVSPSQIHALV 418

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           VK  + +   VG +L + YSK  +   A ++F++I +KD+ +W++M++GY Q G    A 
Sbjct: 419 VKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAV 478

Query: 415 ELFIKMQESDVPPNVITW------------------------------------NVLISG 438
           ++F+++ +  V PN  T+                                    + L++ 
Sbjct: 479 KIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTM 538

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
           Y + GN + A ++F+R     +V R+  SWNS+I+GY Q G    +L +F +M+S     
Sbjct: 539 YAKRGNIESANEVFKR-----QVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLEL 593

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           + +T + V+ AC +    N+ +     +++   +  ++   + ++D Y+++G +  +  +
Sbjct: 594 DGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDL 653

Query: 558 FDGMS-SKDIITWNSLICGYVLH 579
            + M        W +L+    +H
Sbjct: 654 INKMPFPAGATIWRTLLAACRVH 676


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 263/790 (33%), Positives = 396/790 (50%), Gaps = 89/790 (11%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D   + K+ Q C    D   GK +   +I+ G        N+++ ++  CG ++ AR+ F
Sbjct: 60  DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           +S++ K  V WN++I+GY Q+G   EA  LF +M  E ++  ++TF I++ + +      
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179

Query: 276 VAMEMVKRMESLGITPD-------------------------------VFTWTCMISGFA 304
           +  E   ++  +G   D                               V T+  MI G+A
Sbjct: 180 LGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYA 239

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           ++G   +A  LF  M   G  PN ++  S +  C+  +ALA G  +H+  +  G  DDV 
Sbjct: 240 KSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVR 299

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
           V  +LI MY  C  +E A RVFD +K +DV SW  MI GY +      A+ LF  MQE  
Sbjct: 300 VATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEG 359

Query: 425 VPPNVITW-----------------------------------NVLISGYIQNGNEDEAV 449
           + P+ IT+                                     L+  Y + G   +A 
Sbjct: 360 IQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDAR 419

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
            +F  M + D V     SW+++I  Y + G    A   F  M+ +   P+ VT +++L A
Sbjct: 420 QVFDAMSRRDVV-----SWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNA 474

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           C +L A +   EI+   ++  L S +PV N+LI+   K G+I  +R IF+ M  +D++TW
Sbjct: 475 CGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTW 534

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
           N +I GY LHG    ALDLFD+M     +PN  TF+ ++ A S AG V+ G++ F  + +
Sbjct: 535 NVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLD 594

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
              I+P +E Y  M+DL GR+G+L+EA   I  MP++P+SSIW  LL ACRI+GN+D+A 
Sbjct: 595 GRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAE 654

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLV 749
            A ER    EP D  +   +  +YA  G  E+  KVRK+      R   G  WIEV+  +
Sbjct: 655 RAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKL 714

Query: 750 YTFVTGGWSESYSDLLYSWLQN----------VPENVTARSSHSGLCIEEEEKEEISGIH 799
           +TFV    S   +  +Y+ L            +P  VT    H+   + E+EKEE    H
Sbjct: 715 HTFVVEDRSHPQAGEIYAELARLMTAIKREGYIP--VTQNVLHN---VGEQEKEEAISYH 769

Query: 800 SEKLALAFALIG-SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
           SEKLA+A+ ++   S AP  IRI KN+R+C  CH  +K++S +   EI   D+   HHFK
Sbjct: 770 SEKLAIAYGVLSLPSGAP--IRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFK 827

Query: 859 NGQCSCGDYW 868
           NG CSCGDYW
Sbjct: 828 NGVCSCGDYW 837



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 157/610 (25%), Positives = 287/610 (47%), Gaps = 82/610 (13%)

Query: 44  VLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLSVYA 102
           VL  +      +   TY+ L Q C+      L +++    +    +++++    L+ +++
Sbjct: 48  VLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHS 107

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
            CG + +AR+ F+ +  + + TW+A+I  Y++    +E   LF  MV + + P    F  
Sbjct: 108 ICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLI 167

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           +L AC +    + GK  H+ VIK+G     R+  +++++YVK G +  AR+ F+ + ++D
Sbjct: 168 VLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRD 227

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------------------- 261
              +N MI GY + G+ ++A +LF +M +E  K   ++F                     
Sbjct: 228 VSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHA 287

Query: 262 --------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
                           LIR Y   G  + A  +  +M+      DV +WT MI G+A+N 
Sbjct: 288 QCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMK----VRDVVSWTVMIRGYAENS 343

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
               A  LF  M   G+ P+ +T    I+AC     L++  EIHS  V+ GF  D+LV  
Sbjct: 344 NIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDT 403

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           +L++MY+KC  ++ A +VFD +  +DV SW++MI  Y + G   +A+E F  M+ ++V P
Sbjct: 404 ALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEP 463

Query: 428 NVITW-----------------------------------NVLISGYIQNGNEDEAVDLF 452
           +V+T+                                   N LI+  +++G+ + A  +F
Sbjct: 464 DVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIF 523

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
           + M     V+R+  +WN +I GY   G    AL +F +M    F PN VT + VL AC+ 
Sbjct: 524 ENM-----VQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSR 578

Query: 513 LVASNKVKEIHGCVLR-RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWN 570
                + +     +L  R +  ++ +   ++D   ++G +  +  + + M  K +   W+
Sbjct: 579 AGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWS 638

Query: 571 SLICGYVLHG 580
           +L+    ++G
Sbjct: 639 TLLAACRIYG 648



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 236/502 (47%), Gaps = 64/502 (12%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF-VK 94
           G + EA  +   +  +  +    T++ +L AC     + L ++ HA +  V  +  F + 
Sbjct: 141 GHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIG 200

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T L+S+Y K G +D AR+VF+ + +R++ T++ MIG Y++     +  +LF+ M Q+G  
Sbjct: 201 TALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFK 260

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+   F  IL  C        GK +H+  +  G+    RV  +++ +Y+ CG +  ARR 
Sbjct: 261 PNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRV 320

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F+ M  +D V+W  MI GY +    ++A  LF  M  E I+   +T+  +I +       
Sbjct: 321 FDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADL 380

Query: 275 DVAMEMVKRMESLGITP-------------------------------DVFTWTCMISGF 303
            +A E+  ++   G                                  DV +W+ MI  +
Sbjct: 381 SLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAY 440

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
            +NG   +A + F  M    V P+ VT  + ++AC  L AL +GMEI++ A+K      +
Sbjct: 441 VENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHI 500

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
            VGN+LINM  K   +E A  +F+ +  +DV +WN MI GY   G   +A +LF +M + 
Sbjct: 501 PVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKE 560

Query: 424 DVPPNVITWNVLIS-----GYIQNGNEDEA------------------VDLFQRMGKNDK 460
              PN +T+  ++S     G+++ G    +                  VDL  R G+ D+
Sbjct: 561 RFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDE 620

Query: 461 ---------VKRNTASWNSLIA 473
                    +K N++ W++L+A
Sbjct: 621 AELLINRMPLKPNSSIWSTLLA 642



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 191/402 (47%), Gaps = 34/402 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           +G   +A  +   +  +G K  R +++++L  C    ++   + +HA  +N     DV V
Sbjct: 241 SGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRV 300

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +Y  CG ++ AR VF+ M+ R++ +W+ MI  Y+ +    +   LF  M ++G+
Sbjct: 301 ATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGI 360

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD   +  I+ AC +  D    + +HS V++ G      V  +++ +Y KCG +  AR+
Sbjct: 361 QPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQ 420

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F++M  +D V+W++MI  Y + G  +EA   F  M R  ++  VVT+  L+ +   LG 
Sbjct: 421 VFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGA 480

Query: 274 CDVAMEM----------------------------VKRMESL---GITPDVFTWTCMISG 302
            D+ ME+                            ++R   +    +  DV TW  MI G
Sbjct: 481 LDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGG 540

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS-LAVKMGFTD 361
           ++ +G   +ALDLF  M      PN VT    +SAC+    +  G    S L    G   
Sbjct: 541 YSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVP 600

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS-WNSMIA 402
            + +   ++++  +  EL+ AE + + +  K   S W++++A
Sbjct: 601 TMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLA 642


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 286/924 (30%), Positives = 467/924 (50%), Gaps = 98/924 (10%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKV----RRNTYINLLQACIDSNSIHLARKLHAFLNLVT 87
           LC  G LN A+  L       A      R+     LLQ C    ++ + RKL   L + +
Sbjct: 78  LCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSS 137

Query: 88  EI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           +   D  + T+L+++Y+ CG   ++R VF+ +  +NL+ W+A++  Y R++ + E +  F
Sbjct: 138 QFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTF 197

Query: 146 FLMVQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
             ++    F PD+F FP +++AC    D   GK +H + +K+G+     V N+++A+Y K
Sbjct: 198 LELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGK 257

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--------------- 249
           CG L  A   F+ M E++ ++WNS+I G+ + G   EA+R F  +               
Sbjct: 258 CGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMV 317

Query: 250 -----CREE-------------IKLGVV----TFNILIRSYNQLGQCDVAMEMVKRMESL 287
                C  E             +KLG+V      N LI  Y++ G    A  + +++E+ 
Sbjct: 318 TLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIEN- 376

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM--PNGVTITSAISACTDLKALA 345
                V +W  MI  +++ G   +  DL ++M     +   N VTI + + AC +   L 
Sbjct: 377 ---KSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELL 433

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
               +H  +++  F    L+ N+ I  Y+KC  L  AE VF  +  K V SWN++I G+ 
Sbjct: 434 SLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHA 493

Query: 406 QAGYCGKAYELFIKMQESDVPPN---------------VITWNVLISGYI-QNG---NED 446
           Q G   KA + + +M    + P+               ++ +   I G++ +NG   N  
Sbjct: 494 QNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSF 553

Query: 447 EAVDL----------------FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
            AV L                F+RMG      +N+  WN++++GY Q    N AL +FR+
Sbjct: 554 VAVSLLSLYFHCSKPFYGRTYFERMG-----DKNSVCWNAMLSGYSQNELPNEALSLFRQ 608

Query: 491 MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGN 550
           M S    P+ + I S+L AC+ L A    KE+H   L+ SL     V  SL+D YAKSG 
Sbjct: 609 MLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGF 668

Query: 551 IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA 610
           + +S+ IF+ ++ K++ +WN +I G+ +HG  + A++LF+ MK    +P+R TFL ++ A
Sbjct: 669 LGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQA 728

Query: 611 HSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSS 670
              AG+V  G      +   Y++ P +EHY+ +ID+ GR+G+L EA+ FI +MP EPD+ 
Sbjct: 729 CCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAK 788

Query: 671 IWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLER 730
           IW +LL++   + ++++     E+L  LE        L+  +YA  GK +    VR+  +
Sbjct: 789 IWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMK 848

Query: 731 ENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---- 786
           + + +   G  WIE++  VY+F+ G  S   SD +   + N  E       ++  C    
Sbjct: 849 DLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRK-MWNRLEKQIVEIGYTPDCSCVL 907

Query: 787 --IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
             +EE EK +I   HSEK+A+ F  + + +   T+RI KN+R+C  CH  AKY+S     
Sbjct: 908 HELEEVEKRKILKGHSEKVAICFGFLNTKEGT-TLRISKNLRICRDCHNAAKYISKAAKR 966

Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
           EI + D+K  HHFK G CSCGDYW
Sbjct: 967 EIVIRDNKRFHHFKKGICSCGDYW 990


>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Glycine max]
          Length = 805

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 255/786 (32%), Positives = 416/786 (52%), Gaps = 44/786 (5%)

Query: 23  RFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF 82
           +F  TH   LC +GR+ EA+  L  + +    V    Y  LLQ C+   ++ LA +LHA 
Sbjct: 17  QFSLTHFSSLCKHGRIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHAD 76

Query: 83  L---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
           +        ++ FV +KL+ +YAKCG  + A  +F D    N+++W+A+IG ++R     
Sbjct: 77  VIKRGPTFALNDFVISKLVILYAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCE 136

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK-LGMSCVRRVRNSV 198
           E +  +  M QDGL PD+F+ P +L+ACG       GK +H+ V+K +G+     V  S+
Sbjct: 137 EALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSL 196

Query: 199 LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV 258
           + +Y KCG +  A + F+ M E++ V WNSM+  Y Q G N EA R+F +M  + +++ +
Sbjct: 197 VDMYGKCGAVEDAGKVFDEMSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTL 256

Query: 259 VTF-------------------------------NILIRS----YNQLGQCDVAMEMVKR 283
           V                                 N+L  S    Y ++G  + A  + + 
Sbjct: 257 VALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKVGLIEEAEVVFRN 316

Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
           M       DV TW  +++G+AQ G   +AL++   M   G+  + VT+++ ++   D + 
Sbjct: 317 MA----VKDVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRD 372

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           L +GM+ H+  VK  F  DV+V + +I+MY+KC  ++ A RVF  ++ KD+  WN+M+A 
Sbjct: 373 LVLGMKAHAYCVKNDFEGDVVVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAA 432

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
             + G  G+A +LF +MQ   VPPNV++WN LI G+ +NG   EA ++F  M  +  V  
Sbjct: 433 CAEQGLSGEALKLFFQMQLESVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSG-VMP 491

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           N  +W ++++G  Q G  + A+ VFR+MQ     PN ++I S L  C  +      + IH
Sbjct: 492 NLITWTTMMSGLVQNGFGSGAMMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIH 551

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
           G V+RR L  S+ ++ S++D YAK G++  ++ +F   S+K++  +N++I  Y  HG   
Sbjct: 552 GYVMRRDLSQSIHIITSIMDMYAKCGSLDGAKCVFKMCSTKELYVYNAMISAYASHGQAR 611

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            AL LF QM+  G+ P+  T  S++ A S  G++  G KVF  +    Q+ P  EHY  +
Sbjct: 612 EALVLFKQMEKEGIVPDHITLTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHYGCL 671

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           + L    G+L+EA+  I  MP  PD+ I  +LLTAC  + +I+LA    + L  L+P + 
Sbjct: 672 VKLLANDGQLDEALRTILTMPSHPDAHILGSLLTACGQNNDIELADYIAKWLLKLDPDNS 731

Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
                +  +YA  GK +    +R L +E   R   G  WIEV   ++ F+    S   ++
Sbjct: 732 GNYVALSNVYAAVGKWDKVSNLRGLMKEKGLRKIPGCSWIEVGQELHVFIASDRSHPKTE 791

Query: 764 LLYSWL 769
            +Y  L
Sbjct: 792 EIYVTL 797


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 254/761 (33%), Positives = 400/761 (52%), Gaps = 84/761 (11%)

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
           LVIK G+      +  +++++ K G +  A R FE +D+K    +++M+ GY +    + 
Sbjct: 71  LVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLET 130

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRS---------------------------------- 267
           A     +M  +++K  V  F  L++                                   
Sbjct: 131 ALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVN 190

Query: 268 -YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            Y +  Q D A +M  RM       D+ +W  +I+GF+QNG   +AL+L   M   G  P
Sbjct: 191 MYAKCRQIDDAYKMFDRMPER----DLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRP 246

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           + +T+ + + A  D+  L +G  IH  A++ GF   V +  +L +MYSKC  +E A  +F
Sbjct: 247 DSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIF 306

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT--------------- 431
           D +  K V SWNSM+ GY Q G   KA  +F KM E  + P  +T               
Sbjct: 307 DGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLE 366

Query: 432 --------------------WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                                N LIS Y +    D A D+F     N+   R   SWN++
Sbjct: 367 RGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIF-----NNLNGRTHVSWNAM 421

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           I GY Q G+ + AL  F +M+S    P+  T++SV+PA A L  +   K IHG ++R  L
Sbjct: 422 ILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCL 481

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
           + ++ V  +L+D Y+K G I  +R +FD +S + +ITWN++I GY  HG   AALDLFD+
Sbjct: 482 DKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDK 541

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           MK   ++PN  T+LS+I A S +G+VD G + F S+ + Y + P ++HY AM+DL GR+G
Sbjct: 542 MKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAG 601

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
           +++EA +FIE+MPI P  +++ A   AC+IH NI++   A ++LF+L P +     L+  
Sbjct: 602 RIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLAN 661

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN 771
           IYA   K     +VRK   +   + + G   +E++N V++F +G  +   S  +Y++L+ 
Sbjct: 662 IYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQSKRIYAFLEE 721

Query: 772 VPENVTARS----SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRM 827
           +   + A      ++  L +E++ +E++   HSEKLA+AF L+ +S    TI + KN+R+
Sbjct: 722 LVYEIKAAGYVPDTNLILDVEDDVQEQLLNSHSEKLAIAFGLLNTSPGT-TIHVRKNLRV 780

Query: 828 CVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           C  CH   KY+S++   EI + D +  HHFKNG CSCGDYW
Sbjct: 781 CGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 247/502 (49%), Gaps = 36/502 (7%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV 86
           T L     N  L  A+  L  +     K     +  LL+ C D+  +   +++H    L+
Sbjct: 117 TMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHG--QLI 174

Query: 87  TE---IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
           T     +VF  T ++++YAKC  +DDA ++F+ M ER+L +W+ +I  +S++   ++ +E
Sbjct: 175 TNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALE 234

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           L   M  +G  PD      +L A  + G    GK +H   I+ G + +  +  ++  +Y 
Sbjct: 235 LVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYS 294

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           KCG +  AR  F+ MD+K  V+WNSM+ GY Q GE ++A  +F+KM  E I    VT   
Sbjct: 295 KCGSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIME 354

Query: 264 LIRSYNQLGQ-----------------CDVA-----MEMVKRMESLGITPDVF------- 294
            + +   LG                   D++     + M  + + + I  D+F       
Sbjct: 355 ALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRT 414

Query: 295 --TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
             +W  MI G+AQNGR S+AL+ F EM  +G+ P+  T+ S I A  +L        IH 
Sbjct: 415 HVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHG 474

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
           L ++     ++ V  +L++MYSKC  +  A ++FDMI D+ V +WN+MI GY   G    
Sbjct: 475 LIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRA 534

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
           A +LF KM++  V PN IT+  +IS    +G  DE +  F+ M ++  ++ +   + +++
Sbjct: 535 ALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMV 594

Query: 473 AGYQQLGQKNNALGVFRKMQSS 494
               + G+   A      M  S
Sbjct: 595 DLLGRAGRIKEAWDFIENMPIS 616



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 135/545 (24%), Positives = 244/545 (44%), Gaps = 74/545 (13%)

Query: 77  RKLHAFLNLVTEIDVF----VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY 132
           ++LH  + LV +  ++     +TKL+S+++K G +++A  VFE + ++    +  M+  Y
Sbjct: 63  KELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGY 122

Query: 133 SRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR 192
           +++      +     M  D + P  + F  +L+ CG+  D + GK +H  +I    +   
Sbjct: 123 AKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANV 182

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
                V+ +Y KC ++  A + F+ M E+D V+WN++I+G+ Q G   +A  L  +M  E
Sbjct: 183 FAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDE 242

Query: 253 EIKLGVVTFNILIRS-----------------------------------YNQLGQCDVA 277
             +   +T   ++ +                                   Y++ G  + A
Sbjct: 243 GQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETA 302

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
             +   M+       V +W  M+ G+ QNG   +A+ +F++M   G+ P GVTI  A+ A
Sbjct: 303 RLIFDGMDQ----KTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHA 358

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C DL  L  G  +H    ++    D+ V NSLI+MYSKC+ ++ A  +F+ +  +   SW
Sbjct: 359 CADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSW 418

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA--------- 448
           N+MI GY Q G   +A   F +M+   + P+  T   +I    +      A         
Sbjct: 419 NAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIR 478

Query: 449 -------------VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGV 487
                        VD++ + G     +        R+  +WN++I GY   G    AL +
Sbjct: 479 SCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDL 538

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
           F KM+     PN +T LSV+ AC++  +    ++          LE S+    +++D   
Sbjct: 539 FDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLG 598

Query: 547 KSGNI 551
           ++G I
Sbjct: 599 RAGRI 603



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 159/330 (48%), Gaps = 17/330 (5%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF--- 82
           ++ +D    NG   +AI V + +  +G      T +  L AC D   +   + +H F   
Sbjct: 318 NSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQ 377

Query: 83  LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
           LNL ++I V     L+S+Y+KC  +D A ++F ++  R   +W+AMI  Y+++ R  E +
Sbjct: 378 LNLGSDISVM--NSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEAL 435

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR---VRNSVL 199
             F  M   G+ PD F    ++ A          K +H L+I+   SC+ +   V  +++
Sbjct: 436 NCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIR---SCLDKNIFVTTALV 492

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +Y KCG +  AR+ F+ + ++  + WN+MI GY   G    A  LFDKM +  ++   +
Sbjct: 493 DMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDI 552

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
           T+  +I + +  G  D  +   K M +  G+ P +  +  M+    + GR  +A D  + 
Sbjct: 553 TYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIEN 612

Query: 319 MSFVGVMPNGVTITSA-ISACTDLKALAMG 347
           M     +  G+T+  A   AC   K + +G
Sbjct: 613 MP----ISPGITVYGAXXGACKIHKNIEVG 638


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 261/810 (32%), Positives = 403/810 (49%), Gaps = 93/810 (11%)

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
           W    ++   + Q G   D + + K+LQ+C    D   GK +H  +++ GM     + N+
Sbjct: 25  WYAPADVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINT 84

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           +L +YV CG +  ARR F+    K  V+WN MISGY   G   EA  LF  M +E ++  
Sbjct: 85  LLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPD 144

Query: 258 VVTF-----------------------------------NILIRSYNQLGQCDVAMEMVK 282
             TF                                   N LI  Y + G    A  +  
Sbjct: 145 KFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFD 204

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
            M S     D  +WT +   +A++G   ++L  +  M   GV P+ +T  + +SAC  L 
Sbjct: 205 AMASR----DEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLA 260

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           AL  G +IH+  V+     DV V  +L  MY KC  ++ A  VF+ + ++DV +WN+MI 
Sbjct: 261 ALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIG 320

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITW------------------------------ 432
           G   +G   +A+ +F +M +  V P+ +T+                              
Sbjct: 321 GLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVS 380

Query: 433 -----NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
                N LI+ Y + G+  +A  +F RM K D V     SW +L+ GY   GQ   +   
Sbjct: 381 DVRFGNALINMYSKAGSMKDARQVFDRMPKRDVV-----SWTALVGGYADCGQVVESFST 435

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           F+KM       N +T + VL AC+  VA    KEIH  V++  + + L V N+L+  Y K
Sbjct: 436 FKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFK 495

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G++  +  + +GMS++D++TWN+LI G   +G    AL  F+ MKS  ++PN  TF+++
Sbjct: 496 CGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNV 555

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           + A  +  +V+ G++ F S+ + Y I+P  +HY+ M+D+  R+G L EA + I  MP +P
Sbjct: 556 MSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKP 615

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
            +++W ALL ACR HGN+++   A E+   LEP +      +  IYA  G   D  K+RK
Sbjct: 616 SAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRK 675

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--------TAR 779
           L +E   +   G+ WIEV   V++FV G  S   ++ +YS L+ + + +        T  
Sbjct: 676 LMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRF 735

Query: 780 SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYV 838
             H    +++E KE     HSEKLA+A+ LI  S  P T IR+ KN+R+C  CH   K++
Sbjct: 736 VMHD---LDQEGKERAVCHHSEKLAIAYGLI--STPPETPIRVSKNLRVCTDCHTATKFI 790

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S +   EI   D+   HHFKNG+CSCGDYW
Sbjct: 791 SKITGREIIARDAHRFHHFKNGECSCGDYW 820



 Score =  255 bits (651), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 181/651 (27%), Positives = 300/651 (46%), Gaps = 93/651 (14%)

Query: 44  VLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYA 102
           VL  +  +G++V    Y+ LLQ+C+ +  + + +++H   L    + +V++   LL +Y 
Sbjct: 31  VLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYV 90

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
            CG +++AR +F+    +++ +W+ MI  Y+     +E   LF LM Q+GL PD F F  
Sbjct: 91  HCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVS 150

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           IL AC +      G+ +H  V++ G++    V N+++++Y KCG +  ARR F++M  +D
Sbjct: 151 ILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRD 210

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-NIL----------------- 264
            V+W ++   Y + G   E+ + +  M +E ++   +T+ N+L                 
Sbjct: 211 EVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHA 270

Query: 265 ----------IRSYNQLGQCDVAMEMVK-RMESLGITP--DVFTWTCMISGFAQNGRTSQ 311
                     +R    L +  +    VK   E     P  DV  W  MI G   +G+  +
Sbjct: 271 QIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEE 330

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           A  +F  M    V P+ VT  + +SAC     LA G EIH+ AVK G   DV  GN+LIN
Sbjct: 331 AHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALIN 390

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MYSK   ++ A +VFD +  +DV SW +++ GY   G   +++  F KM +  V  N IT
Sbjct: 391 MYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKIT 450

Query: 432 W-----------------------------------NVLISGYIQNGNEDEAVDLFQRMG 456
           +                                   N L+S Y + G+ ++A+ + + M 
Sbjct: 451 YMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMS 510

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
             D V     +WN+LI G  Q G+   AL  F  M+S    PN  T ++V+ AC      
Sbjct: 511 TRDVV-----TWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACR---VR 562

Query: 517 NKVKEIHGCVLRRSLESS------LPVMNS---LIDTYAKSGNIVYSRTIFDGMSSK-DI 566
           N V+E      RR   S       +P       ++D  A++G++  +  +   M  K   
Sbjct: 563 NLVEE-----GRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSA 617

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSLAGM 616
             W +L+     HG         +Q     L+P N GT++S+   ++ AGM
Sbjct: 618 AMWGALLAACRAHGNVEIGEQAAEQ--CLKLEPQNAGTYVSLSFIYAAAGM 666



 Score =  225 bits (574), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 144/512 (28%), Positives = 247/512 (48%), Gaps = 45/512 (8%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           G   EA  +   +  +G +  + T++++L AC    +++  R++H   +      +  V 
Sbjct: 124 GLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVG 183

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+S+YAKCG + DAR VF+ M  R+  +W+ + GAY+     +E ++ +  M+Q+G+ 
Sbjct: 184 NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVR 243

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P    +  +L ACG+    E GK +H+ +++       RV  ++  +Y+KCG +  AR  
Sbjct: 244 PSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREV 303

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------- 261
           FE +  +D +AWN+MI G    G+ +EAH +F +M +E +    VT+             
Sbjct: 304 FECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGL 363

Query: 262 ----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                                 N LI  Y++ G    A ++  RM       DV +WT +
Sbjct: 364 ACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR----DVVSWTAL 419

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           + G+A  G+  ++   FK+M   GV  N +T    + AC++  AL  G EIH+  VK G 
Sbjct: 420 VGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGI 479

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             D+ V N+L++MY KC  +E A RV + +  +DV +WN++I G  Q G   +A + F  
Sbjct: 480 FADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEV 539

Query: 420 MQESDVPPNVITW-NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
           M+  ++ PN  T+ NV+ +  ++N  E E    F  M K+  +      +  ++    + 
Sbjct: 540 MKSEEMRPNATTFVNVMSACRVRNLVE-EGRRQFASMRKDYGIVPTEKHYACMVDILARA 598

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           G    A  V   M    F P+     ++L AC
Sbjct: 599 GHLGEAEDVILTMP---FKPSAAMWGALLAAC 627



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 215/491 (43%), Gaps = 58/491 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           +G   E++    ++  +G +  R TY+N+L AC    ++   +++HA  +      DV V
Sbjct: 224 SGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRV 283

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L  +Y KCG + DAREVFE +  R++  W+ MIG      +  E   +F  M+++ +
Sbjct: 284 STALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECV 343

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD   +  IL AC   G    GK +H+  +K G+    R  N+++ +Y K G +  AR+
Sbjct: 344 APDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQ 403

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------ 261
            F+ M ++D V+W +++ GY   G+  E+   F KM ++ ++   +T+            
Sbjct: 404 VFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVA 463

Query: 262 -----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
                                  N L+  Y + G  + A+ + + M     T DV TW  
Sbjct: 464 LKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMS----TRDVVTWNT 519

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG-MEIHSLAVKM 357
           +I G AQNGR  +AL  F+ M    + PN  T  + +SAC     +  G  +  S+    
Sbjct: 520 LIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDY 579

Query: 358 GFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAG----YCGK 412
           G          ++++ ++   L EA + +  M        W +++A  C+A        +
Sbjct: 580 GIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAA-CRAHGNVEIGEQ 638

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW---- 468
           A E  +K++    P N  T+  L   Y   G   +   L + M +    K    SW    
Sbjct: 639 AAEQCLKLE----PQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVA 694

Query: 469 ---NSLIAGYQ 476
              +S +AG Q
Sbjct: 695 GEVHSFVAGDQ 705



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 162/321 (50%), Gaps = 17/321 (5%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-- 83
           +T +  L  +G+L EA  +   +  +     R TY+ +L AC     +   +++HA    
Sbjct: 316 NTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVK 375

Query: 84  -NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
             LV+  DV     L+++Y+K G + DAR+VF+ M +R++ +W+A++G Y+   +  E  
Sbjct: 376 DGLVS--DVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESF 433

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
             F  M+Q G+  +   +  +L+AC N    + GK +H+ V+K G+     V N+++++Y
Sbjct: 434 STFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMY 493

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF- 261
            KCG +  A R  E M  +D V WN++I G  Q G   EA + F+ M  EE++    TF 
Sbjct: 494 FKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFV 553

Query: 262 NIL----IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           N++    +R+  + G+     +     +  GI P    + CM+   A+ G   +A D+  
Sbjct: 554 NVMSACRVRNLVEEGR----RQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVIL 609

Query: 318 EMSFVGVMPNGVTITSAISAC 338
            M F    P+     + ++AC
Sbjct: 610 TMPF---KPSAAMWGALLAAC 627



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/314 (20%), Positives = 133/314 (42%), Gaps = 53/314 (16%)

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR--KMQSSCFYPNCVTILSV 506
           +  + R+ K+  +  +T  W +     Q L QK + +  +   K+  SC     + +   
Sbjct: 6   ISRWSRVDKSSMIPTSTDGWYAPADVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAV--- 62

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
                        K++H  +LR  ++ ++ ++N+L+  Y   G++  +R +FD  S+K +
Sbjct: 63  ------------GKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSV 110

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
           ++WN +I GY   G    A +LF  M+  GL+P++ TF+SI+ A S    ++ G++V   
Sbjct: 111 VSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVR 170

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP---------------------- 664
           + E   +       +A+I +Y + G + +A    + M                       
Sbjct: 171 VMEA-GLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQE 229

Query: 665 ------------IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP-GDVLIQRLILQ 711
                       + P    +  +L+AC     ++       ++ + E   DV +   + +
Sbjct: 230 SLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTK 289

Query: 712 IYAICGKPEDALKV 725
           +Y  CG  +DA +V
Sbjct: 290 MYIKCGAVKDAREV 303


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 271/867 (31%), Positives = 434/867 (50%), Gaps = 89/867 (10%)

Query: 36   GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
            GR+ EA  V +S+  +       ++  ++   + +  +  ARKL    + + E +V    
Sbjct: 247  GRIEEAREVFESMTERNVV----SWNAMISGYVQNGDLKNARKL---FDEMPEKNVASWN 299

Query: 96   KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
             +++ Y  C  + +ARE+F+ M ERN  +W  MI  Y     + E  ++F  M +    P
Sbjct: 300  SVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARP 359

Query: 156  DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
            D  +F  +L A     D E    +  + IK G      V +++L  Y + G L  A  FF
Sbjct: 360  DQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFF 419

Query: 216  ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL------------------- 256
            E+M E++  +W +MI+ + Q G  D+A +L++++  + +                     
Sbjct: 420  ETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARL 479

Query: 257  --------GVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR 308
                     VV +N +I  Y Q G    A ++ ++M       +  +W  MI+GF QN  
Sbjct: 480  IFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMP----VKNSASWAAMIAGFVQNEE 535

Query: 309  TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
            + +AL+L  E+   G +P+  + TSA+SAC ++  + +G  IHSLA+K G   +  V N 
Sbjct: 536  SREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNG 595

Query: 369  LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
            LI+MY+KC  +E    VF  I+ KD                                   
Sbjct: 596  LISMYAKCGNVEDGSHVFRTIRVKDT---------------------------------- 621

Query: 429  VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
             ++WN LISG  +N   D+A  +F++M K D V     SW ++I+ Y Q G    AL +F
Sbjct: 622  -VSWNSLISGLSENYMLDDARVVFEKMPKRDVV-----SWTAIISAYVQAGHGEVALDLF 675

Query: 489  RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
              M +    PN +T+ S+L AC  L A    ++ H  + +   ++ L V NSLI  Y K 
Sbjct: 676  LDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKC 735

Query: 549  GNIVYSRT--IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
            G   Y     +F+ M   D+ITWN+++ G   +G    A+ +F+QM+  G+ P++ +FL 
Sbjct: 736  G---YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLG 792

Query: 607  IILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
            ++ A S AG+VD G   F S+T+ Y I+P++ HY+ M+DL GR+G L EA   IE+MP++
Sbjct: 793  VLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVK 852

Query: 667  PDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR 726
            PDS IWEALL ACRIH N++L     ERLF +         L+  ++A  G  +   ++R
Sbjct: 853  PDSVIWEALLGACRIHRNVELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIR 912

Query: 727  KLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPE--NVTARSSHSG 784
            KL ++       G  WI+VKN ++ FVTG  +    + +YS L+        T     + 
Sbjct: 913  KLMKDQGLTKEPGISWIQVKNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTN 972

Query: 785  LC---IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMM 841
                 +EEE+K+     HSEKLA+ F ++ +      I+I+KN+R+C  CH   K++S +
Sbjct: 973  FVLHDVEEEQKQNELLYHSEKLAVVFGILSTPNGS-PIQIIKNLRICGDCHTFMKFMSKV 1031

Query: 842  HHCEIFLADSKCLHHFKNGQCSCGDYW 868
               +I + D    HHF++G CSCGDYW
Sbjct: 1032 TLRKIIIRDGNRFHHFRDGSCSCGDYW 1058



 Score =  245 bits (626), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 181/652 (27%), Positives = 303/652 (46%), Gaps = 113/652 (17%)

Query: 102 AKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFP 161
            + G +++AR VF +M +R++ +W++MI  YS++ +  E   LF          D F+  
Sbjct: 182 GRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF----------DAFV-- 229

Query: 162 KILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK 221
                         GK + +  I             +L  Y K G++  AR  FESM E+
Sbjct: 230 --------------GKNIRTWTI-------------LLTGYAKEGRIEEAREVFESMTER 262

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMV 281
           + V+WN+MISGY Q G+   A +LFD+M  +     V ++N ++  Y    +   A E+ 
Sbjct: 263 NVVSWNAMISGYVQNGDLKNARKLFDEMPEK----NVASWNSVVTGYCHCYRMSEARELF 318

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
            +M       +  +W  MISG+       +A D+F +M      P+       +SA T L
Sbjct: 319 DQMPER----NSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGL 374

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
             L +   +  +A+K G+  DV+VG++++N Y++   L+ A   F+ + +++ YSW +MI
Sbjct: 375 DDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMI 434

Query: 402 AGYCQAGYCGKAYELFIKMQESDVP---------------------------PNVITWNV 434
           A + Q G    A +L+ ++ E  V                            PNV+ WN 
Sbjct: 435 AAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNA 494

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           +I+GY QNG   EA DLFQ+M       +N+ASW ++IAG+ Q  +   AL +  ++  S
Sbjct: 495 IIAGYTQNGMLKEAKDLFQKMP-----VKNSASWAAMIAGFVQNEESREALELLIELHRS 549

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI--- 551
              P+  +  S L ACA +      + IH   ++   + +  VMN LI  YAK GN+   
Sbjct: 550 GSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDG 609

Query: 552 --VY--------------------------SRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
             V+                          +R +F+ M  +D+++W ++I  YV  G   
Sbjct: 610 SHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGE 669

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            ALDLF  M + G+KPN+ T  S++ A    G + LG++ F ++         +   +++
Sbjct: 670 VALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQ-FHALIFKLGFDTFLFVGNSL 728

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
           I +Y + G  E+     E+MP E D   W A+L  C  +G    A+   E++
Sbjct: 729 ITMYFKCG-YEDGFCVFEEMP-EHDLITWNAVLVGCAQNGLGKEAIKIFEQM 778



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 166/358 (46%), Gaps = 41/358 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N    EA+ +L  +   G+    +++ + L AC +   + + R +H+  +    + + +V
Sbjct: 533 NEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYV 592

Query: 94  KTKLLSVYAKCG-------------------------------CLDDAREVFEDMRERNL 122
              L+S+YAKCG                                LDDAR VFE M +R++
Sbjct: 593 MNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDV 652

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            +W+A+I AY +       ++LF  M+  G+ P+      +L ACGN G  + G+  H+L
Sbjct: 653 VSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHAL 712

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF--FESMDEKDGVAWNSMISGYFQIGEND 240
           + KLG      V NS++ +Y KCG   +   F  FE M E D + WN+++ G  Q G   
Sbjct: 713 IFKLGFDTFLFVGNSLITMYFKCG---YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGK 769

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCM 299
           EA ++F++M  E I    ++F  ++ + +  G  D        M +  GI P V+ +TCM
Sbjct: 770 EAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCM 829

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           +    + G  S+A  L + M    V P+ V   + + AC   + + +G  +     +M
Sbjct: 830 VDLLGRAGYLSEAEALIENMP---VKPDSVIWEALLGACRIHRNVELGQRVAERLFQM 884



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 119/537 (22%), Positives = 242/537 (45%), Gaps = 75/537 (13%)

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
           N+ I    ++G  +EA R+F++M    I+  VV++N +I  Y+Q G+ D A  +      
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEM----IQRDVVSWNSMINGYSQNGKVDEARLLFDAF-- 228

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
             +  ++ TWT +++G+A+ GR  +A ++F+ M+   V+     I+  +    DLK    
Sbjct: 229 --VGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQN-GDLK---- 281

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
                 L  +M    +V   NS++  Y  C  +  A  +FD + +++  SW  MI+GY  
Sbjct: 282 --NARKLFDEMP-EKNVASWNSVVTGYCHCYRMSEARELFDQMPERNSVSWMVMISGYVH 338

Query: 407 AGYCGKAYELFIKMQESDVPP-----------------------------------NVIT 431
                +A+++F+KM  +   P                                   +V+ 
Sbjct: 339 ISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVV 398

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            + +++ Y +NG+ D A+  F+ M      +RN  SW ++IA + Q G+ ++A+ ++ ++
Sbjct: 399 GSAILNAYTRNGSLDLAMHFFETMP-----ERNEYSWTTMIAAFAQCGRLDDAIQLYERV 453

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC--VLRRSLESSLPVMNSLIDTYAKSG 549
                        +V    A + A  +V  I     +    L  ++   N++I  Y ++G
Sbjct: 454 PEQ----------TVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNG 503

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
            +  ++ +F  M  K+  +W ++I G+V +     AL+L  ++   G  P+  +F S + 
Sbjct: 504 MLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALS 563

Query: 610 AHSLAGMVDLGKKVFC-SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
           A +  G V++G+ +   +I    Q    +   + +I +Y + G +E+       + ++ D
Sbjct: 564 ACANIGDVEIGRVIHSLAIKTGCQFNSYV--MNGLISMYAKCGNVEDGSHVFRTIRVK-D 620

Query: 669 SSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
           +  W +L++    +  +D A +  E+   +   DV+    I+  Y   G  E AL +
Sbjct: 621 TVSWNSLISGLSENYMLDDARVVFEK---MPKRDVVSWTAIISAYVQAGHGEVALDL 674



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 83/160 (51%), Gaps = 10/160 (6%)

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           ++   G   + + ++ L   N+ I    + G +  +R +F+ M  +D+++WNS+I GY  
Sbjct: 155 IRHKSGAKNKETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQ 214

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           +G    A  LFD      +  N  T+  ++  ++  G ++  ++VF S+TE       + 
Sbjct: 215 NGKVDEARLLFDAF----VGKNIRTWTILLTGYAKEGRIEEAREVFESMTE-----RNVV 265

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            ++AMI  Y ++G L+ A +  ++MP E + + W +++T 
Sbjct: 266 SWNAMISGYVQNGDLKNARKLFDEMP-EKNVASWNSVVTG 304


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 249/786 (31%), Positives = 394/786 (50%), Gaps = 85/786 (10%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           + F    LLS+YAK G L DA  VF +M +R+  +W+ MI   +R  R+ + V+ F  MV
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMV 339

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            +G  P  F    +L +C        G+ +H  V+KLG+S    V NSVL +Y KCG   
Sbjct: 340 SEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAE 399

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            AR  FE M  +   +W                                   N+++  Y 
Sbjct: 400 TARAVFERMQVRSVSSW-----------------------------------NVMVSLYT 424

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNG 328
             G+ ++A+ M + M    +   + +W  +I+G+ QNG    AL  F  M S   + P+ 
Sbjct: 425 HQGRMELAVSMFENM----VERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDA 480

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            T+TS +SAC +L+ L MG ++HS  ++ G      + N+LI+ Y+K   +E A R+ D 
Sbjct: 481 FTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQ 540

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
               D+                                 NVI++  L+ GY++ G+  +A
Sbjct: 541 AVVADL---------------------------------NVISFTALLEGYVKLGDTKQA 567

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
            ++F  M   D +     +W ++I GY Q GQ + A+ +FR M      PN  T+ +VL 
Sbjct: 568 REIFDIMNNRDVI-----AWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLS 622

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDII 567
           ACA L   +  K+IH   +R   E S+ V N++I  YA+SG++  +R +FD +   K+ I
Sbjct: 623 ACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETI 682

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
           TW S+I     HG    A+ LF++M   G+KP+  T++ ++ A + AG VD GK+ +  +
Sbjct: 683 TWTSMIVAMAQHGLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQM 742

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
              + I+P + HY+ M+DL+ R+G L EA EFI+ MP+ PD+ +W +LL ACR+  N DL
Sbjct: 743 QNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADL 802

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
           A LA  +L  ++P +      +  +Y+ CG+  DA ++ KL ++   +   G  W  V+ 
Sbjct: 803 AELAAGKLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRG 862

Query: 748 LVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEK 802
            V+ F          D +Y     + E +        L      +++E KEE+   HSEK
Sbjct: 863 KVHVFGADDVLHPQRDSIYRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEK 922

Query: 803 LALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQC 862
           LA+AF LI + +   T+RI+KN+R+C  CH   K++S     EI + D+   HHF++G C
Sbjct: 923 LAIAFGLISTPEKT-TLRIMKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYC 981

Query: 863 SCGDYW 868
           SC DYW
Sbjct: 982 SCKDYW 987



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 148/575 (25%), Positives = 253/575 (44%), Gaps = 118/575 (20%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK----LIWARRFF 215
           + ++LQ C    +  AG+ +H+  +K G+     + N++LA Y   G        AR  F
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271

Query: 216 ESMD--EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
           + +    ++   WNS++S Y + G   +AH +F +M   +     V++ I+I   N+ G+
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRD----AVSWTIMIVGLNRSGR 327

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
              A++    M S G  P  F                                   T+T+
Sbjct: 328 FWDAVKTFLDMVSEGFAPSQF-----------------------------------TLTN 352

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            +S+C  ++A  +G ++H   VK+G +  V V NS++ MY KC + E A  VF+ ++ + 
Sbjct: 353 VLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFERMQVRS 412

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ 453
           V SWN M++ Y   G      EL + M E+ V  ++++WN +I+GY QNG +  A+  F 
Sbjct: 413 VSSWNVMVSLYTHQGR----MELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKFFS 468

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
           RM                                   + +S   P+  T+ SVL ACA L
Sbjct: 469 RM-----------------------------------LSASSMEPDAFTVTSVLSACANL 493

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI---------------------- 551
                 K++H  +LR  +  S  +MN+LI TYAKSG++                      
Sbjct: 494 RMLKMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTA 553

Query: 552 -----------VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
                        +R IFD M+++D+I W ++I GY  +G    A++LF  M   G +PN
Sbjct: 554 LLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPN 613

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
             T  +++ A +    +D GK++ C      Q    +   +A+I +Y RSG +  A    
Sbjct: 614 SHTLAAVLSACASLAYLDYGKQIHCKAIRSLQ-EQSVSVSNAIITVYARSGSVPLARRVF 672

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
           + +    ++  W +++ A   HG  + AV+  E +
Sbjct: 673 DQICWRKETITWTSMIVAMAQHGLGEQAVVLFEEM 707



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 228/512 (44%), Gaps = 78/512 (15%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           +GR  +A+     + ++G    + T  N+L +C    +  + RK+H F + L     V V
Sbjct: 325 SGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPV 384

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ--- 150
              +L +Y KCG  + AR VFE M+ R++ +W+ M+  Y+   R    V +F  MV+   
Sbjct: 385 ANSVLYMYGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSI 444

Query: 151 ---------------DGLF--------------PDDFLFPKILQACGNCGDFEAGKLMHS 181
                          DG+               PD F    +L AC N    + GK MHS
Sbjct: 445 VSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHS 504

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES--MDEKDGVAWNSMISGYFQIGEN 239
            +++ GM C  ++ N++++ Y K G +  ARR  +   + + + +++ +++ GY ++G+ 
Sbjct: 505 YILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDT 564

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
            +A  +FD M   +    V+ +  +I  Y+Q GQ D AME+ + M  +G  P+       
Sbjct: 565 KQAREIFDIMNNRD----VIAWTAMIVGYHQNGQNDEAMELFRSMILIG--PE------- 611

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
                                     PN  T+ + +SAC  L  L  G +IH  A++   
Sbjct: 612 --------------------------PNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQ 645

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMI-KDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              V V N++I +Y++   +  A RVFD I   K+  +W SMI    Q G   +A  LF 
Sbjct: 646 EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQAVVLFE 705

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
           +M    V P+ IT+  ++S     G  D+    +++M     +    + +  ++  + + 
Sbjct: 706 EMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVDLHARA 765

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           G    A    ++M  +   P+ V   S+L AC
Sbjct: 766 GLLTEAHEFIQRMPVA---PDTVVWGSLLAAC 794



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 166/350 (47%), Gaps = 26/350 (7%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           L+     S S+  AR++     +V +++V   T LL  Y K G    ARE+F+ M  R++
Sbjct: 521 LISTYAKSGSVETARRIMD-QAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDV 579

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
             W+AMI  Y ++ +  E +ELF  M+  G  P+      +L AC +    + GK +H  
Sbjct: 580 IAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCK 639

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDE 241
            I+        V N+++ VY + G +  ARR F+ +   K+ + W SMI    Q G  ++
Sbjct: 640 AIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQ 699

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMI 300
           A  LF++M R  +K   +T+  ++ +    G  D      ++M++  GI P +  + CM+
Sbjct: 700 AVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMV 759

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC-----TDLKALAMGMEIHSLAV 355
              A+ G  ++A +  + M    V P+ V   S ++AC      DL  LA G        
Sbjct: 760 DLHARAGLLTEAHEFIQRMP---VAPDTVVWGSLLAACRVRKNADLAELAAG-------- 808

Query: 356 KMGFTDDVLVG--NSLINMYSKCEELEAAERVFDMIKDKDV-----YSWN 398
           K+   D    G  ++L N+YS C     A R++ + KDK V     +SW 
Sbjct: 809 KLLSIDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWT 858


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 272/905 (30%), Positives = 442/905 (48%), Gaps = 101/905 (11%)

Query: 46  DSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCG 105
           D  ++     R    + LL+A  D   +   R++HA + +   ++  +   LL +Y KC 
Sbjct: 18  DLPSSSSGATRPAHLVRLLRAAGDDRLLSQGRRIHARI-VSLGLEEELGNHLLRLYLKCE 76

Query: 106 CLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQ 165
            L D  EVF  +  R+  +W+ +I AY+   + +  + +F  M Q+G+  D   F  +L+
Sbjct: 77  SLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLK 136

Query: 166 ACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA 225
           AC   GD   G+ +H+ +++ G+     + N +L +Y  CG +  A   FE M E+D V+
Sbjct: 137 ACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVS 195

Query: 226 WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI---------------------- 263
           WN+ I+   Q G+   A  LF +M  E ++   +T  I                      
Sbjct: 196 WNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQAQAIHFIVRESG 255

Query: 264 ----------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
                     L  +Y +LG    A E+  R        DV +W  M+  +AQ+G  S+A 
Sbjct: 256 LEQTLVVSTALASAYARLGHLYQAKEVFDR----AAERDVVSWNAMLGAYAQHGHMSEAA 311

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
            LF  M   G+ P+ VT+ +A + C+ L+    G  IH  A++ G   D+++GN+L++MY
Sbjct: 312 LLFARMLHEGISPSKVTLVNASTGCSSLR---FGRMIHGCALEKGLDRDIVLGNALLDMY 368

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
           ++C   E A  +F  I    V SWN+MIAG  Q G   +A ELF +MQ   + P   T+ 
Sbjct: 369 TRCGSPEEARHLFKRIPCNAV-SWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYL 427

Query: 434 VLISGYIQNGNE---------------------------------------DEAVDLFQR 454
            L+     N  E                                       DEA   FQR
Sbjct: 428 NLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQR 487

Query: 455 MGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV 514
               D  + +  SWN++I+   Q G    ALG FR+M      PN +T ++VL ACA   
Sbjct: 488 GAMED--RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAA 545

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLI 573
           A  + + +H  +    +ES+L V  +L   Y + G++  +R IF+ ++  +D++ +N++I
Sbjct: 546 ALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMI 605

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
             Y  +G    AL LF +M+  G +P+  +F+S++ A S  G+ D G ++F S+ + Y I
Sbjct: 606 AAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGI 665

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
            P  +HY+  +D+ GR+G L +A E I  M ++P   +W+ LL ACR + ++D   LA  
Sbjct: 666 APSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANS 725

Query: 694 RLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFV 753
            + +L+PGD     ++  I A  GK ++A +VR        R   G+ WIE+K+ V+ FV
Sbjct: 726 MVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFV 785

Query: 754 TGGWSESYSDLLYSWLQN----------VPENVTARSSHSGLCIEEEEKEEISGIHSEKL 803
            G  S   S+ +Y  L+           VP+            ++E EKE +   HSE+L
Sbjct: 786 AGDRSHPRSEEIYRELERLHAEIREIGYVPDTRLVLRK-----VDEAEKERLLCQHSERL 840

Query: 804 ALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCS 863
           A+A  ++ SS    T+R++KN+R+C  CH   K++S + + EI + D+   HHF +G CS
Sbjct: 841 AIALGVMSSS--TDTVRVMKNLRVCEDCHNATKFISKIVNKEIVVRDTHRFHHFVDGSCS 898

Query: 864 CGDYW 868
           CGDYW
Sbjct: 899 CGDYW 903



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 155/626 (24%), Positives = 270/626 (43%), Gaps = 110/626 (17%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           +G+   AI +   +  +G +    T++ +L+AC     +   R +HA++     ++  +K
Sbjct: 106 HGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWI-----VESGLK 160

Query: 95  TK------LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            K      LL +Y  CGC+  A  +FE M ER+L +W+A I A ++       +ELF  M
Sbjct: 161 GKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALELFQRM 219

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
             +G+ P        L  C      +A   +H +V + G+     V  ++ + Y + G L
Sbjct: 220 QLEGVRPARITLVIALTVCATIRQAQA---IHFIVRESGLEQTLVVSTALASAYARLGHL 276

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------- 261
             A+  F+   E+D V+WN+M+  Y Q G   EA  LF +M  E I    VT        
Sbjct: 277 YQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGC 336

Query: 262 -------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                                    N L+  Y + G  + A  + KR     I  +  +W
Sbjct: 337 SSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKR-----IPCNAVSW 391

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT----DLKALAMGMEIHS 352
             MI+G +Q G+  +A++LF+ M   G+ P   T  + + A      + +A+A G ++HS
Sbjct: 392 NTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHS 451

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD---MIKDKDVYSWNSMIAGYCQAGY 409
             V  G+  +  +G +++ MY+ C  ++ A   F    M    DV SWN++I+   Q G+
Sbjct: 452 RIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGH 511

Query: 410 CGKAYELFIKMQESDVPPNVIT-----------------------------------WNV 434
             +A   F +M    V PN IT                                      
Sbjct: 512 GKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATA 571

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           L S Y + G+ + A ++F+++     V+R+   +N++IA Y Q G    AL +F +MQ  
Sbjct: 572 LASMYGRCGSLESAREIFEKVA----VERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQE 627

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS------LIDTYAKS 548
              P+  + +SVL AC++   +++  EI      RS+  S  +  S       +D   ++
Sbjct: 628 GSRPDEQSFVSVLSACSHGGLADEGWEIF-----RSMRQSYGIAPSEDHYACAVDVLGRA 682

Query: 549 GNIVYSRTIFDGMSSKD-IITWNSLI 573
           G +  +  +   M  K  ++ W +L+
Sbjct: 683 GWLADAEELIRCMDVKPTVLVWKTLL 708



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 162/338 (47%), Gaps = 13/338 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACI----DSNSIHLARKLHA-FLNLVTEI 89
            G++  A+ +   +  +G    R TY+NLL+A      ++ ++   RKLH+  ++     
Sbjct: 401 KGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYAS 460

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFED--MRER-NLYTWSAMIGAYSRDQRWREVVELFF 146
           +  + T ++ +YA CG +D+A   F+   M +R ++ +W+A+I + S+    +  +  F 
Sbjct: 461 EPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFR 520

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M   G+ P+      +L AC        G+++H  +   GM     V  ++ ++Y +CG
Sbjct: 521 RMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCG 580

Query: 207 KLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            L  AR  FE +  E+D V +N+MI+ Y Q G   EA +LF +M +E  +    +F  ++
Sbjct: 581 SLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVL 640

Query: 266 RSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
            + +  G  D   E+ + M +S GI P    + C +    + G  + A +L + M    V
Sbjct: 641 SACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMD---V 697

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
            P  +   + + AC   + +  G   +S+  ++   D+
Sbjct: 698 KPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDE 735


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 258/800 (32%), Positives = 404/800 (50%), Gaps = 86/800 (10%)

Query: 76  ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           AR+L   + L    +VF    LLS++AK G L DAR VF +M ER+  +W+ M+   +R 
Sbjct: 84  ARRLFDEIPLARR-NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRA 142

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
            R+ E ++    M  DG  P  F    +L +C        G+ +HS V+KLG+     V 
Sbjct: 143 GRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVA 202

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           NSVL +Y KCG    A   FE M  +   +WN+M                          
Sbjct: 203 NSVLNMYGKCGDAETASTVFERMPVRSVSSWNAM-------------------------- 236

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
              V+ N        LG+ D+A  + + M    I     +W  MI+G+ QNG  ++AL L
Sbjct: 237 ---VSLN------THLGRMDLAESLFESMPGRSIV----SWNAMIAGYNQNGLDAKALKL 283

Query: 316 FKEMSFVGVM-PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
           F  M     M P+  TITS +SAC +L  + +G ++H+  ++     +  V N+LI+ Y+
Sbjct: 284 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYA 343

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           K                               +G    A  +  +  E+D+  NVI++  
Sbjct: 344 K-------------------------------SGSVENARRIMDQSMETDL--NVISFTA 370

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           L+ GY++ G+ + A ++F  M   D V     +W ++I GY+Q G+ + A+ +FR M + 
Sbjct: 371 LLEGYVKIGDMESAREMFGVMNNRDVV-----AWTAMIVGYEQNGRNDEAIDLFRSMITC 425

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              PN  T+ +VL  CA L   +  K+IH   +R  LE S  V N++I  YA+SG+  ++
Sbjct: 426 GPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWA 485

Query: 555 RTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           R +FD +   K+ ITW S+I     HG    A+ LF++M   G++P+R T++ ++ A S 
Sbjct: 486 RRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSH 545

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           AG V+ GK+ +  I   +QI P + HY+ M+DL  R+G   EA EFI  MP+EPD+  W 
Sbjct: 546 AGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWG 605

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
           +LL+ACR+H N +LA LA E+L  ++P +      I  +Y+ CG+  DA ++ K  +E  
Sbjct: 606 SLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKA 665

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IE 788
            R   G  W  +++ ++ F          D +Y+    + E +        L      ++
Sbjct: 666 VRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVD 725

Query: 789 EEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFL 848
           +E KEE+   HSEKLA+AF LI S+    T+R++KN+R+C  CH   K +S +   EI +
Sbjct: 726 DELKEELLSRHSEKLAIAFGLI-STPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIV 784

Query: 849 ADSKCLHHFKNGQCSCGDYW 868
            D+   HHF++G CSC DYW
Sbjct: 785 RDATRFHHFRDGLCSCKDYW 804



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 150/586 (25%), Positives = 257/586 (43%), Gaps = 128/586 (21%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK----CGKLIWARRFF 215
           + ++LQ C    +  AG+ +H+  +K G+     + N++L+ Y +     G L  ARR F
Sbjct: 29  YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88

Query: 216 E--SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
           +   +  ++   WNS++S + + G   +A  +F +M   +     V++ +++   N+ G+
Sbjct: 89  DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERD----AVSWTVMVVGLNRAGR 144

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
              A++ +  M + G TP  F                                   T+T+
Sbjct: 145 FGEAIKTLLDMTADGFTPTQF-----------------------------------TLTN 169

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            +S+C   +A A+G ++HS  VK+G    V V NS++NMY KC + E A  VF+ +  + 
Sbjct: 170 VLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFERMPVRS 229

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ 453
           V SWN+M++     G    A  LF    ES    ++++WN +I+GY QNG + +A+ LF 
Sbjct: 230 VSSWNAMVSLNTHLGRMDLAESLF----ESMPGRSIVSWNAMIAGYNQNGLDAKALKLFS 285

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
           RM                                   +  S   P+  TI SVL ACA L
Sbjct: 286 RM-----------------------------------LHESSMAPDEFTITSVLSACANL 310

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG------------- 560
                 K++H  +LR  +  +  V N+LI TYAKSG++  +R I D              
Sbjct: 311 GNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTA 370

Query: 561 --------------------MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
                               M+++D++ W ++I GY  +G    A+DLF  M + G +PN
Sbjct: 371 LLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPN 430

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS----AMIDLYGRSGKLEEA 656
             T  +++   +    +D GK++      C  I  ++E  S    A+I +Y RSG    A
Sbjct: 431 SYTLAAVLSVCASLACLDYGKQI-----HCRAIRSLLERSSSVSNAIITMYARSGSFPWA 485

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF--DLEP 700
               + +    ++  W +++ A   HG  + AV   E +    +EP
Sbjct: 486 RRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 531



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 123/511 (24%), Positives = 223/511 (43%), Gaps = 78/511 (15%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVK 94
           GR  EAI  L  +   G    + T  N+L +C  + +  + RK+H+F + L     V V 
Sbjct: 143 GRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVA 202

Query: 95  TKLLSVYAKC-------------------------------GCLDDAREVFEDMRERNLY 123
             +L++Y KC                               G +D A  +FE M  R++ 
Sbjct: 203 NSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIV 262

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
           +W+AMI  Y+++    + ++LF  M+ +  + PD+F    +L AC N G+   GK +H+ 
Sbjct: 263 SWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY 322

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD--GVAWNSMISGYFQIGEND 240
           +++  M+   +V N++++ Y K G +  ARR  +   E D   +++ +++ GY +IG+ +
Sbjct: 323 ILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 382

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            A  +F  M   +    VV +  +I  Y Q G+ D A+++ + M + G  P         
Sbjct: 383 SAREMFGVMNNRD----VVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEP--------- 429

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
                                     N  T+ + +S C  L  L  G +IH  A++    
Sbjct: 430 --------------------------NSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 463

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMI-KDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
               V N++I MY++      A R+FD +   K+  +W SMI    Q G   +A  LF +
Sbjct: 464 RSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEE 523

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M  + V P+ IT+  ++S     G  +E    + ++    ++    + +  ++    + G
Sbjct: 524 MLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAG 583

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             + A    R+M      P+ +   S+L AC
Sbjct: 584 LFSEAQEFIRRMP---VEPDAIAWGSLLSAC 611



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 169/346 (48%), Gaps = 18/346 (5%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           L+     S S+  AR++    ++ T+++V   T LL  Y K G ++ ARE+F  M  R++
Sbjct: 338 LISTYAKSGSVENARRIMD-QSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
             W+AMI  Y ++ R  E ++LF  M+  G  P+ +    +L  C +    + GK +H  
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCR 456

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDE 241
            I+  +     V N+++ +Y + G   WARR F+ +   K+ + W SMI    Q G+ +E
Sbjct: 457 AIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE 516

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMI 300
           A  LF++M R  ++   +T+  ++ + +  G  +       ++++   I P++  + CM+
Sbjct: 517 AVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMV 576

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV-KMGF 359
              A+ G  S+A +  + M    V P+ +   S +SAC   K      E+  LA  K+  
Sbjct: 577 DLLARAGLFSEAQEFIRRMP---VEPDAIAWGSLLSACRVHK----NAELAELAAEKLLS 629

Query: 360 TDDVLVG--NSLINMYSKCEELEAAERVFDMIKDKDV-----YSWN 398
            D    G  +++ N+YS C     A R++   K+K V     +SW 
Sbjct: 630 IDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWT 675



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 12/206 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NGR +EAI +  S+ T G +    T   +L  C     +   +++H   +  + E    V
Sbjct: 409 NGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLERSSSV 468

Query: 94  KTKLLSVYAKCGCLDDAREVFEDM-RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              ++++YA+ G    AR +F+ +   +   TW++MI A ++  +  E V LF  M++ G
Sbjct: 469 SNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAG 528

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLV-----IKLGMSCVRRVRNSVLAVYVKCGK 207
           + PD   +  +L AC + G    GK  +  +     I   MS        ++ +  + G 
Sbjct: 529 VEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY----ACMVDLLARAGL 584

Query: 208 LIWARRFFESMD-EKDGVAWNSMISG 232
              A+ F   M  E D +AW S++S 
Sbjct: 585 FSEAQEFIRRMPVEPDAIAWGSLLSA 610


>gi|215768832|dbj|BAH01061.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 842

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 255/826 (30%), Positives = 423/826 (51%), Gaps = 55/826 (6%)

Query: 61  INLLQACID---SNSIH-----LARKLHAF-LNLVTEIDVFVKTKLLSVYAKCG----CL 107
           ++LL+ C D    ++ H     LA +LH+  +      D  V   L+ + A+ G    C 
Sbjct: 48  VSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCA 107

Query: 108 DDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC 167
               E  ED   ++   W+  +   +  + W E + +F  M   G+  D +   ++L AC
Sbjct: 108 RLLHEAAED-GAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHAC 166

Query: 168 GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
           G  G    G+ +H+  +KL +     V   +  +Y +   +  A R  ++M     V WN
Sbjct: 167 GRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWN 226

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
           ++++                                      +LG  D A+E+  RM   
Sbjct: 227 AVVA-----------------------------------CCARLGLVDDALELAARMSRS 251

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
           G  P+V TW  ++SG +++GR  +AL +   M   G+ P+  T++S + +  +   L  G
Sbjct: 252 GPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHG 311

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
           MEIH   ++     DV  G +L++MY+KC  L+ A++V D ++ +++ +WNS++AGY  A
Sbjct: 312 MEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANA 371

Query: 408 GYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTAS 467
           G    A EL   M+++ + P++ TWN LI+GY  NG   +AV L +++ K   V  N  S
Sbjct: 372 GRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQI-KAAGVTPNVVS 430

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           W SLI+G    G+  ++     +MQ     P+ VT+  +L ACA L    K KE+H   L
Sbjct: 431 WTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFAL 490

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           RR+ +  + V  +LID Y+K G++V ++ IF+ +  K+++  N+++ G  +HG    A++
Sbjct: 491 RRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIE 550

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           LF  M + GLKP+  TF +++ A    G+V  G + F S+   Y + P  E+Y+ M+DL 
Sbjct: 551 LFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLL 610

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
            R G L+EAM+FIE  PI+P +S W ALLT C IHGN+ LA +A   LF LEP +     
Sbjct: 611 ARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEVAARNLFILEPYNSANYL 670

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG-----WSESYS 762
           L++ +Y      ++A  ++   +     +  G  WI+++  ++ F   G      +E Y 
Sbjct: 671 LMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYE 730

Query: 763 DLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
           +L+    Q         +S     ++EEEKE++   H+EKLA+ + LI S  +   +R++
Sbjct: 731 ELIRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVM 790

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN RMC  CHE AK++S +   +I L D+   HHF +G+CSC DYW
Sbjct: 791 KNTRMCNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCNDYW 836



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 234/501 (46%), Gaps = 36/501 (7%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LN 84
           + H+  L      +EAI V   +  +G      T   +L AC  + ++   R +HA+ L 
Sbjct: 125 NKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALK 184

Query: 85  LVTEI----------------DVFVKTKLLSVY---------------AKCGCLDDAREV 113
           L  +                 DV   T++L                  A+ G +DDA E+
Sbjct: 185 LALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALEL 244

Query: 114 FEDMR----ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
              M     E N+ TW+ ++   SR  R RE + +   M++ GL PD      +L++  N
Sbjct: 245 AARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVAN 304

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
            G    G  +H   ++  +        +++ +Y KCG+L  A++  ++++ ++   WNS+
Sbjct: 305 TGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSL 364

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           ++GY   G  D A  L + M +  +   + T+N LI  Y+  GQ   A+ +++++++ G+
Sbjct: 365 VAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGV 424

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
           TP+V +WT +ISG   NG    +     EM   GV P+ VT++  + AC  L     G E
Sbjct: 425 TPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKE 484

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H  A++  +  D++V  +LI+MYSK   L +A+ +F+ I+ K++   N+M+ G    G 
Sbjct: 485 LHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQ 544

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
             +A ELF  M  S + P+ IT+  L++     G   E  + F  M     VK  T ++ 
Sbjct: 545 GREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYA 604

Query: 470 SLIAGYQQLGQKNNALGVFRK 490
            ++    + G  + A+    +
Sbjct: 605 CMVDLLARCGYLDEAMDFIER 625


>gi|48475086|gb|AAT44155.1| hypothetical protein, contains pentrtricopeptide (PPR) repeat
           [Oryza sativa Japonica Group]
 gi|125568883|gb|EAZ10398.1| hypothetical protein OsJ_00231 [Oryza sativa Japonica Group]
          Length = 836

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 255/826 (30%), Positives = 423/826 (51%), Gaps = 55/826 (6%)

Query: 61  INLLQACID---SNSIH-----LARKLHAF-LNLVTEIDVFVKTKLLSVYAKCG----CL 107
           ++LL+ C D    ++ H     LA +LH+  +      D  V   L+ + A+ G    C 
Sbjct: 48  VSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCA 107

Query: 108 DDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC 167
               E  ED   ++   W+  +   +  + W E + +F  M   G+  D +   ++L AC
Sbjct: 108 RLLHEAAED-GAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHAC 166

Query: 168 GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
           G  G    G+ +H+  +KL +     V   +  +Y +   +  A R  ++M     V WN
Sbjct: 167 GRAGALREGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWN 226

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
           ++++                                      +LG  D A+E+  RM   
Sbjct: 227 AVVA-----------------------------------CCARLGLVDDALELAARMSRS 251

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
           G  P+V TW  ++SG +++GR  +AL +   M   G+ P+  T++S + +  +   L  G
Sbjct: 252 GPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHG 311

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
           MEIH   ++     DV  G +L++MY+KC  L+ A++V D ++ +++ +WNS++AGY  A
Sbjct: 312 MEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSLVAGYANA 371

Query: 408 GYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTAS 467
           G    A EL   M+++ + P++ TWN LI+GY  NG   +AV L +++ K   V  N  S
Sbjct: 372 GRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQI-KAAGVTPNVVS 430

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           W SLI+G    G+  ++     +MQ     P+ VT+  +L ACA L    K KE+H   L
Sbjct: 431 WTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFAL 490

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           RR+ +  + V  +LID Y+K G++V ++ IF+ +  K+++  N+++ G  +HG    A++
Sbjct: 491 RRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIE 550

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           LF  M + GLKP+  TF +++ A    G+V  G + F S+   Y + P  E+Y+ M+DL 
Sbjct: 551 LFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYACMVDLL 610

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
            R G L+EAM+FIE  PI+P +S W ALLT C IHGN+ LA +A   LF LEP +     
Sbjct: 611 ARCGYLDEAMDFIERSPIDPGASHWGALLTGCSIHGNLALAEVAARNLFILEPYNSANYL 670

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG-----WSESYS 762
           L++ +Y      ++A  ++   +     +  G  WI+++  ++ F   G      +E Y 
Sbjct: 671 LMMNLYEYERMYDEAESLKYAMKARGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYE 730

Query: 763 DLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
           +L+    Q         +S     ++EEEKE++   H+EKLA+ + LI S  +   +R++
Sbjct: 731 ELIRLVFQIKKAGYVPDTSCIAYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVM 790

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN RMC  CHE AK++S +   +I L D+   HHF +G+CSC DYW
Sbjct: 791 KNTRMCNDCHEVAKHISSLCDRQIILRDAVRFHHFVDGKCSCNDYW 836



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/501 (26%), Positives = 234/501 (46%), Gaps = 36/501 (7%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LN 84
           + H+  L      +EAI V   +  +G      T   +L AC  + ++   R +HA+ L 
Sbjct: 125 NKHVAMLAEAEEWDEAIAVFREMQARGVPADGYTCARVLHACGRAGALREGRAVHAYALK 184

Query: 85  LVTEI----------------DVFVKTKLLSVY---------------AKCGCLDDAREV 113
           L  +                 DV   T++L                  A+ G +DDA E+
Sbjct: 185 LALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALEL 244

Query: 114 FEDMR----ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
              M     E N+ TW+ ++   SR  R RE + +   M++ GL PD      +L++  N
Sbjct: 245 AARMSRSGPEPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVAN 304

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
            G    G  +H   ++  +        +++ +Y KCG+L  A++  ++++ ++   WNS+
Sbjct: 305 TGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVLDALEHRNLTTWNSL 364

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           ++GY   G  D A  L + M +  +   + T+N LI  Y+  GQ   A+ +++++++ G+
Sbjct: 365 VAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGV 424

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
           TP+V +WT +ISG   NG    +     EM   GV P+ VT++  + AC  L     G E
Sbjct: 425 TPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKE 484

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H  A++  +  D++V  +LI+MYSK   L +A+ +F+ I+ K++   N+M+ G    G 
Sbjct: 485 LHCFALRRAYDCDMVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQ 544

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
             +A ELF  M  S + P+ IT+  L++     G   E  + F  M     VK  T ++ 
Sbjct: 545 GREAIELFHDMWNSGLKPDSITFTALLTACRSMGLVTEGWEYFDSMETKYGVKPTTENYA 604

Query: 470 SLIAGYQQLGQKNNALGVFRK 490
            ++    + G  + A+    +
Sbjct: 605 CMVDLLARCGYLDEAMDFIER 625


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 285/924 (30%), Positives = 466/924 (50%), Gaps = 98/924 (10%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKV----RRNTYINLLQACIDSNSIHLARKLHAFLNLVT 87
           LC  G LN A+  L       A      R+     LLQ C    ++ + RKL   L + +
Sbjct: 78  LCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSS 137

Query: 88  EI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           +   D  + T+L+++Y+ CG   ++R VF+ +  +NL+ W+A++  Y R++ + E +  F
Sbjct: 138 QFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTF 197

Query: 146 FLMVQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
             ++    F PD+F FP +++AC    D   GK +H + +K+G+     V N+++A+Y K
Sbjct: 198 LELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGK 257

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--------------- 249
           CG L  A   F+ M E++ ++WNS+I G+ + G   EA+R F  +               
Sbjct: 258 CGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMV 317

Query: 250 -----CREE-------------IKLGVV----TFNILIRSYNQLGQCDVAMEMVKRMESL 287
                C  E             +KLG+V      N LI  Y++ G    A  + +++E+ 
Sbjct: 318 TLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIEN- 376

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM--PNGVTITSAISACTDLKALA 345
                V +W  MI  +++ G   +  DL ++M     +   N VTI + + AC +   L 
Sbjct: 377 ---KSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELL 433

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
               +H  +++  F    L+ N+ I  Y+KC  L  AE VF  +  K V SWN++I G+ 
Sbjct: 434 SLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHA 493

Query: 406 QAGYCGKAYELFIKMQESDVPPN---------------VITWNVLISGYI-QNG---NED 446
           Q G   KA + + +M    + P+               ++ +   I G++ +NG   N  
Sbjct: 494 QNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSF 553

Query: 447 EAVDL----------------FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
            AV L                F+ MG      +N+  WN++++GY Q    N AL +FR+
Sbjct: 554 VAVSLLSLYFHCSKPFYGRTYFETMG-----DKNSVCWNAMLSGYSQNELPNEALSLFRQ 608

Query: 491 MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGN 550
           M S    P+ + I S+L AC+ L A    KE+H   L+ SL     V  SL+D YAKSG 
Sbjct: 609 MLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGF 668

Query: 551 IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA 610
           + +S+ IF+ ++ K++ +WN +I G+ +HG  + A++LF+ MK    +P+R TFL ++ A
Sbjct: 669 LGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQA 728

Query: 611 HSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSS 670
              AG+V  G      +   Y++ P +EHY+ +ID+ GR+G+L EA+ FI +MP EPD+ 
Sbjct: 729 CCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAK 788

Query: 671 IWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLER 730
           IW +LL++   + ++++     E+L  LE        L+  +YA  GK +    VR+  +
Sbjct: 789 IWSSLLSSSITYVDLEMGEKFAEKLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMK 848

Query: 731 ENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---- 786
           + + +   G  WIE++  VY+F+ G  S   SD +   + N  E       ++  C    
Sbjct: 849 DLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRK-MWNRLEKQIVEIGYTPDCSCVL 907

Query: 787 --IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
             +EE EK +I   HSEK+A+ F  + + +   T+RI KN+R+C  CH  AKY+S     
Sbjct: 908 HELEEVEKRKILKGHSEKVAICFGFLNTKEGT-TLRISKNLRICRDCHNAAKYISKAAKR 966

Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
           EI + D+K  HHFK G CSCGDYW
Sbjct: 967 EIVIRDNKRFHHFKKGICSCGDYW 990


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 263/870 (30%), Positives = 433/870 (49%), Gaps = 74/870 (8%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVK 94
           G   + + V   +     K    T  ++L  C D   +   +++H F+     + DVFV 
Sbjct: 120 GFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVS 179

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           +  ++ YAKC C+ +A+ VF+ M  R++ TW+++   Y      ++ + +F  MV DG+ 
Sbjct: 180 SAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVK 239

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD      IL AC +  D ++GK +H   +K GM     V N+++ +Y  C  +  A+  
Sbjct: 240 PDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAV 299

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F+ M  ++ + WNS+ S Y   G   +   +F +M    +K   +  + ++ + +QL   
Sbjct: 300 FDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDL 359

Query: 275 DVAMEMVKRMESLGITPDVF-------------------------------TWTCMISGF 303
                +       G+  DVF                               TW  + S +
Sbjct: 360 KSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCY 419

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
              G   + L++F+EM   GV P+ VT+ S + AC+DL+ L  G  IH  AV+ G  +DV
Sbjct: 420 VNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDV 479

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
            V N+L+++Y+KC  +  A+ VFD+I  ++V SWN                         
Sbjct: 480 FVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNG------------------------ 515

Query: 424 DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
                      +++ Y  N   ++ + +F +M + D+VK +  +W+ +I G  +  +   
Sbjct: 516 -----------ILTAYFTNKEYEKGLYMFSQMNR-DEVKADEITWSVVIGGCVKNSRIEE 563

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID 543
           A+ +FRKMQ+  F P+  TI S+L AC+        KEIH  V R   +  L   N+L+D
Sbjct: 564 AMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVD 623

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGT 603
            YAK G +  SR +FD M  KD+ +WN++I    +HG    AL LF++M    +KP+  T
Sbjct: 624 MYAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSAT 683

Query: 604 FLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
           F  ++ A S + +V+ G ++F S++  + + P  EHY+ ++D+Y R+G LEEA  FI+ M
Sbjct: 684 FTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRM 743

Query: 664 PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDAL 723
           P+EP +  W+A L  CR++ N++LA ++ ++LF+++P        +  I        +A 
Sbjct: 744 PMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEAS 803

Query: 724 KVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHS 783
           K+RKL +E     + G  W  V N V+TFV G  S   SD +Y++L  +   + A     
Sbjct: 804 KIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKP 863

Query: 784 GL-----CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
                   I++EEK E    HSEKLA+AF ++ +     TIR+ KN+R+C  CH   KY+
Sbjct: 864 DTDYVLHDIDQEEKAESLCNHSEKLAVAFGIL-NLNGQSTIRVFKNLRICGDCHNAIKYM 922

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S +    I + DS   HHFKNG CSC D+W
Sbjct: 923 SNVVGVTIVVRDSLRFHHFKNGNCSCKDFW 952



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 165/658 (25%), Positives = 290/658 (44%), Gaps = 108/658 (16%)

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E ++++      G+ PD  +F  + +AC    D    K  H    + G+     + N+ +
Sbjct: 23  EAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFI 82

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
             Y KC  +  ARR F+ +  +D V WNS+ + Y   G   +   +F KM   ++K   +
Sbjct: 83  HAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPL 142

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF------------------------- 294
           T + ++   + L       E+   +   G+  DVF                         
Sbjct: 143 TVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLM 202

Query: 295 ------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
                 TW  + S +   G   + L++F+EM   GV P+ VT++  +SAC+DL+ L  G 
Sbjct: 203 PHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGK 262

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
            IH  A+K G  ++V V N+L+N+Y  C  +  A+ VFD++  ++V +WNS+ + Y   G
Sbjct: 263 AIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCG 322

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLI----------SGYIQNG-------NED----- 446
           +  K   +F +M  + V P+ +  + ++          SG   +G        ED     
Sbjct: 323 FPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCT 382

Query: 447 -------------EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
                        EA  +F  M       RN  +WNSL + Y   G     L VFR+M  
Sbjct: 383 ALVNLYANCLCVREAQTVFDLMP-----HRNVVTWNSLSSCYVNCGFPQKGLNVFREMVL 437

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
           +   P+ VT+LS+L AC+ L      K IHG  +R  +   + V N+L+  YAK   +  
Sbjct: 438 NGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVRE 497

Query: 554 SRTIFDGMSSKDIITWNSLICGYV--------LHGF--------------W--------- 582
           ++ +FD +  +++ +WN ++  Y         L+ F              W         
Sbjct: 498 AQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVK 557

Query: 583 ----HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
                 A+++F +M++ G KP+  T  SI+ A SL+  + +GK++ C +   ++   +  
Sbjct: 558 NSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDL-A 616

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF 696
             +A++D+Y + G L  +    + MPI+ D   W  ++ A  +HGN   A+   E++ 
Sbjct: 617 RTNALVDMYAKCGGLSLSRNVFDMMPIK-DVFSWNTMIFANGMHGNGKEALSLFEKML 673



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 178/394 (45%), Gaps = 41/394 (10%)

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
           +G  ++A+ ++      G+ P+     +   AC   +      + H  A + G   DV +
Sbjct: 18  HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
           GN+ I+ Y KC+ +E A RVFD +  +DV +WNS+ A Y   G+  +   +F KM  + V
Sbjct: 78  GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137

Query: 426 PPNVITWNVLISGY-----IQNGNE------------------------------DEAVD 450
             N +T + ++ G      +++G E                               EA  
Sbjct: 138 KANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQT 197

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +F  M   D V     +WNSL + Y   G     L VFR+M      P+ VT+  +L AC
Sbjct: 198 VFDLMPHRDVV-----TWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSAC 252

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
           + L      K IHG  L+  +  ++ V N+L++ Y     +  ++ +FD M  +++ITWN
Sbjct: 253 SDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWN 312

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC 630
           SL   YV  GF    L++F +M   G+KP+     SI+ A S    +  GK +     + 
Sbjct: 313 SLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVK- 371

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           + ++  +   +A+++LY     + EA    + MP
Sbjct: 372 HGMVEDVFVCTALVNLYANCLCVREAQTVFDLMP 405



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 3/204 (1%)

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           G  N A+ ++   ++    P+    ++V  ACA    + KVK+ H    R  + S + + 
Sbjct: 19  GLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIG 78

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           N+ I  Y K   +  +R +FD + ++D++TWNSL   YV  GF    L++F +M    +K
Sbjct: 79  NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVK 138

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
            N  T  SI+   S    +  GK++   +   + ++  +   SA ++ Y +   + EA  
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKEIHGFVVR-HGMVEDVFVSSAFVNFYAKCLCVREAQT 197

Query: 659 FIEDMPIEPDSSIWEALLTACRIH 682
             + MP   D   W + L++C ++
Sbjct: 198 VFDLMP-HRDVVTWNS-LSSCYVN 219


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 270/838 (32%), Positives = 413/838 (49%), Gaps = 91/838 (10%)

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           E   F+   L+ +Y K G L  A++VFE+++ R+  +W AMI   S++    E + LF  
Sbjct: 196 ESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQ 255

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           +V              L AC     FE GK +H LV+K G S    V N+++ +Y + G 
Sbjct: 256 IV--------------LSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGN 301

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           L  A + F  M ++D V++NS+ISG  Q G  + A  LF KM  +  K   VT   L+ +
Sbjct: 302 LSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSA 361

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS----------------GFAQNGRTSQ 311
              +G      +        G+T D+     ++                  + Q    ++
Sbjct: 362 CASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNK 421

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           +  +F +M   G++PN  T  S +  CT L A  +G +IH+  +K GF  +V V + LI+
Sbjct: 422 SFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLID 481

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MY+K  +L+ A ++F  +K+ DV SW +MIAGY Q     +A  LF +MQ+  +  + I 
Sbjct: 482 MYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIG 541

Query: 432 W-----------------------------------NVLISGYIQNGNEDEAVDLFQRMG 456
           +                                   N L+S Y + G   EA   F ++ 
Sbjct: 542 FASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIY 601

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
             D V     SWNSL++G+ Q G    AL +F +M  +    N  T  S + A A +   
Sbjct: 602 AKDNV-----SWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANV 656

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
              K+IHG + +   +S   V N+LI  YAK G I             D I+WNS+I GY
Sbjct: 657 RIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI-------------DDISWNSMITGY 703

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
             HG    AL LF+ MK   + PN  TF+ ++ A S  G+VD G   F S++E + ++P 
Sbjct: 704 SQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPK 763

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF 696
            EHY+ ++DL GRSG L  A  F+E+MPI+PD+ +W  LL+AC +H NID+   A   L 
Sbjct: 764 PEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLL 823

Query: 697 DLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG 756
           +LEP D     L+  +YA+ GK +   + R++ ++   +   G+ W+EV N V+ F  G 
Sbjct: 824 ELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAGD 883

Query: 757 WSESYSDLLYSWLQNV----PENVTARSSHSGLCIEE-EEKEEISGIHSEKLALAFALIG 811
            +   +D++Y +L+ +     EN      +S L   E  +K+    IHSE+LA+AF L+ 
Sbjct: 884 QNHPRADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAIAFGLLS 943

Query: 812 -SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +S  P  + + KN+R+C  CH   K+VS +    I + DS   HHFK G CSC DYW
Sbjct: 944 LTSSTP--LYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKDYW 999



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 197/762 (25%), Positives = 343/762 (45%), Gaps = 124/762 (16%)

Query: 13  HSLLTKK-SNPRFRDTHLDFLCGNGRLNEAITVLDSIAT----------QGAKVRRNTYI 61
           H LL  K S   F +T L++   +  + E    +D  A+           G +    T++
Sbjct: 26  HKLLCGKFSFSAFSNTALNYAHNDDEIPEKENEMDGNASGIGYLHLMEQHGVRANSQTFL 85

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
            LL+ C++S S                   +   KL+  Y   G L+ A  VF++M  R+
Sbjct: 86  WLLEGCLNSRSF------------------YDGLKLIDFYLAFGDLNCAVNVFDEMPIRS 127

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC-GNCGDFEAGKLMH 180
           L  W+ +   +  ++    V  LF  M+   +  D+ +F  +L+ C GN   F   + +H
Sbjct: 128 LSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIH 187

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
           +  I  G      + N ++ +Y K G L  A++ FE++  +D V+W +MISG  Q G  +
Sbjct: 188 AKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEE 247

Query: 241 EAHRLFDKMCR------EEIKLGVVTFNILIRS--YNQLGQCDVAMEMVKRMESLGITPD 292
           EA  LF ++        E  + G     ++++    ++   C+  + +  R  +L     
Sbjct: 248 EAMLLFCQIVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQ 307

Query: 293 VF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
           +F         ++  +ISG AQ G  ++AL LFK+M+     P+ VT+ S +SAC  + A
Sbjct: 308 IFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGA 367

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           L  G + HS A+K G T D++V  SL+++Y KC +++ A   F                 
Sbjct: 368 LPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF---------------LC 412

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITW------------------------------- 432
           Y Q     K++++F +MQ   + PN  T+                               
Sbjct: 413 YGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFN 472

Query: 433 ----NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
               +VLI  Y ++G  D A+ +F+R+ +ND V     SW ++IAGY Q  +   AL +F
Sbjct: 473 VYVSSVLIDMYAKHGKLDHALKIFRRLKENDVV-----SWTAMIAGYTQHDKFTEALNLF 527

Query: 489 RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
           ++MQ      + +   S + ACA + A ++ ++IH           L + N+L+  YA+ 
Sbjct: 528 KEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARC 587

Query: 549 GNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
           G +  +   FD + +KD ++WNSL+ G+   G++  AL++F QM   GL+ N  TF S +
Sbjct: 588 GKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAV 647

Query: 609 LAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLE-------------- 654
            A +    V +GK++   I +        E  +A+I LY + G ++              
Sbjct: 648 SAAANIANVRIGKQIHGMIRKT-GYDSETEVSNALITLYAKCGTIDDISWNSMITGYSQH 706

Query: 655 ----EAMEFIEDMP---IEPDSSIWEALLTACRIHGNIDLAV 689
               EA++  EDM    + P+   +  +L+AC   G +D  +
Sbjct: 707 GCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGI 748


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 250/769 (32%), Positives = 406/769 (52%), Gaps = 76/769 (9%)

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
           C   +  + +  LV K G+      +  +++++ + G +  A R FE +D K  V +++M
Sbjct: 47  CSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTM 106

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           + G+ ++ + D+A + F +M  ++++  V  F  L++      +  V  E+   +   G 
Sbjct: 107 LKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF 166

Query: 290 TPDVF-------------------------------TWTCMISGFAQNGRTSQALDLFKE 318
           + D+F                               +W  +++G++QNG    AL++ K 
Sbjct: 167 SLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKS 226

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M    + P+ +TI S + A + L+ +++G EIH  A++ GF   V +  +L++MY+KC  
Sbjct: 227 MCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGS 286

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP----------- 427
           LE A ++FD + +++V SWNSMI  Y Q     +A  +F KM +  V P           
Sbjct: 287 LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHA 346

Query: 428 ------------------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
                                   NV   N LIS Y +    D A  +F ++       R
Sbjct: 347 CADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS-----R 401

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
              SWN++I G+ Q G+  +AL  F +M+S    P+  T +SV+ A A L  ++  K IH
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 461

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
           G V+R  L+ ++ V  +L+D YAK G I+ +R IFD MS + + TWN++I GY  HGF  
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
           AAL+LF++M+   +KPN  TFLS+I A S +G+V+ G K F  + E Y I   ++HY AM
Sbjct: 522 AALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAM 581

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           +DL GR+G+L EA +FI  MP++P  +++ A+L AC+IH N++ A  A ERLF+L P D 
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDG 641

Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
               L+  IY      E   +VR        R + G   +E+KN V++F +G  +   S 
Sbjct: 642 GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSK 701

Query: 764 LLYSWLQ----NVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTI 819
            +Y++L+    ++ E      ++  L +E + KE++   HSEKLA++F L+ ++ A  TI
Sbjct: 702 KIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLSTHSEKLAISFGLLNTT-AGTTI 760

Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            + KN+R+C  CH   KY+S++   EI + D +  HHFKNG CSCGDYW
Sbjct: 761 HVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809



 Score =  212 bits (540), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 132/461 (28%), Positives = 223/461 (48%), Gaps = 40/461 (8%)

Query: 60  YINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           +  LL+ C D   + + +++H  L      +D+F  T L ++YAKC  +++AR+VF+ M 
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           ER+L +W+ ++  YS++   R  +E+   M ++ L P       +L A         GK 
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE 257

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H   ++ G   +  +  +++ +Y KCG L  AR+ F+ M E++ V+WNSMI  Y Q   
Sbjct: 258 IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNEN 317

Query: 239 NDEAHRLFDKMCREEIK---------------LG--------------------VVTFNI 263
             EA  +F KM  E +K               LG                    V   N 
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNS 377

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           LI  Y +  + D A  M  +++S  +     +W  MI GFAQNGR   AL+ F +M    
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLV----SWNAMILGFAQNGRPIDALNYFSQMRSRT 433

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V P+  T  S I+A  +L        IH + ++     +V V  +L++MY+KC  +  A 
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
            +FDM+ ++ V +WN+MI GY   G+   A ELF +MQ+  + PN +T+  +IS    +G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
             +  +  F  M +N  ++ +   + +++    + G+ N A
Sbjct: 554 LVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/527 (26%), Positives = 247/527 (46%), Gaps = 72/527 (13%)

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           F +TKL+S++ + G +D+A  VFE +  +    +  M+  +++     + ++ F  M  D
Sbjct: 70  FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            + P  + F  +L+ CG+  +   GK +H L++K G S        +  +Y KC ++  A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------- 261
           R+ F+ M E+D V+WN++++GY Q G    A  +   MC E +K   +T           
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249

Query: 262 ----------------------NI---LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                                 NI   L+  Y + G  + A ++   M    +  +V +W
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM----LERNVVSW 305

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             MI  + QN    +A+ +F++M   GV P  V++  A+ AC DL  L  G  IH L+V+
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
           +G   +V V NSLI+MY KC+E++ A  +F  ++ + + SWN+MI G+ Q G    A   
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEA----------------------VDLFQR 454
           F +M+   V P+  T+  +I+   +      A                      VD++ +
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485

Query: 455 MGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
            G         +   +R+  +WN++I GY   G    AL +F +MQ     PN VT LSV
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 545

Query: 507 LPACAY--LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
           + AC++  LV +  +K  +      S+E S+    +++D   ++G +
Sbjct: 546 ISACSHSGLVEAG-LKCFYMMKENYSIELSMDHYGAMVDLLGRAGRL 591



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 210/445 (47%), Gaps = 53/445 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VF 92
           NG    A+ ++ S+  +  K    T +++L A      I + +++H +  + +  D  V 
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA-MRSGFDSLVN 272

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           + T L+ +YAKCG L+ AR++F+ M ERN+ +W++MI AY +++  +E + +F  M+ +G
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P D      L AC + GD E G+ +H L ++LG+     V NS++++Y KC ++  A 
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 392

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
             F  +  +  V+WN+MI G+ Q G   +A   F +M    +K    T+  +I +  +L 
Sbjct: 393 SMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELS 452

Query: 273 QCDVA----------------------MEMVKRMESLGITPDVF---------TWTCMIS 301
               A                      ++M  +  ++ I   +F         TW  MI 
Sbjct: 453 ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMID 512

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD-------LKALAMGMEIHSLA 354
           G+  +G    AL+LF+EM    + PNGVT  S ISAC+        LK   M  E +S+ 
Sbjct: 513 GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIE 572

Query: 355 VKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQ----AGY 409
           + M          +++++  +   L EA + +  M     V  + +M+ G CQ      +
Sbjct: 573 LSMDHY------GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAML-GACQIHKNVNF 625

Query: 410 CGKAYELFIKMQESDVPPNVITWNV 434
             KA E   ++   D   +V+  N+
Sbjct: 626 AEKAAERLFELNPDDGGYHVLLANI 650



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 151/320 (47%), Gaps = 15/320 (4%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LN 84
           ++ +D    N    EA+ +   +  +G K    + +  L AC D   +   R +H   + 
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
           L  + +V V   L+S+Y KC  +D A  +F  ++ R L +W+AMI  ++++ R  + +  
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR---VRNSVLAV 201
           F  M    + PD F +  ++ A          K +H +V++   SC+ +   V  +++ +
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR---SCLDKNVFVTTALVDM 482

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           Y KCG ++ AR  F+ M E+    WN+MI GY   G    A  LF++M +  IK   VTF
Sbjct: 483 YAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTF 542

Query: 262 NILIRSYNQLGQCDVAME---MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
             +I + +  G  +  ++   M+K   S+ ++ D   +  M+    + GR ++A D   +
Sbjct: 543 LSVISACSHSGLVEAGLKCFYMMKENYSIELSMD--HYGAMVDLLGRAGRLNEAWDFIMQ 600

Query: 319 MSFVGVMPNGVTITSAISAC 338
           M    V P      + + AC
Sbjct: 601 MP---VKPAVNVYGAMLGAC 617


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 282/889 (31%), Positives = 455/889 (51%), Gaps = 105/889 (11%)

Query: 63   LLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
            LLQA      I + RK+H  ++  T +  D  + T+++++YA CG  DD+R VF+ +R +
Sbjct: 445  LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 504

Query: 121  NLYTWSAMIGAYSRDQRWREVVELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLM 179
            NL+ W+A+I +YSR++ + EV+E F  M+    L PD F +P +++AC    D   G  +
Sbjct: 505  NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 564

Query: 180  HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
            H LV+K G+     V N++++ Y   G +  A + F+ M E++ V+WNSMI  +   G +
Sbjct: 565  HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 624

Query: 240  DEAHRLFDKMCRE------------------------EIKLG---------------VVT 260
            +E+  L  +M  E                        EI LG               +V 
Sbjct: 625  EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 684

Query: 261  FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
             N L+  Y++ G C    +M+ +M +     +V +W  M+ GF+  G T    D+ ++M 
Sbjct: 685  NNALMDMYSKCG-CITNAQMIFKMNN---NKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 740

Query: 321  FVG--VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
              G  V  + VTI +A+  C     L    E+H  ++K  F  + LV N+ +  Y+KC  
Sbjct: 741  AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 800

Query: 379  LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
            L  A+RVF  I+ K V SWN++I G+ Q+     + +  ++M+ S + P+  T   L+S 
Sbjct: 801  LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 860

Query: 439  -----------------------------------YIQNGNEDEAVDLFQRMGKNDKVKR 463
                                               YI  G       LF  M   DK   
Sbjct: 861  CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM--EDK--- 915

Query: 464  NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
            +  SWN++I GY Q G  + ALGVFR+M         ++++ V  AC+ L +    +E H
Sbjct: 916  SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 975

Query: 524  GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
               L+  LE    +  SLID YAK+G+I  S  +F+G+  K   +WN++I GY +HG   
Sbjct: 976  AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 1035

Query: 584  AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
             A+ LF++M+  G  P+  TFL ++ A + +G++  G +    +   + + P ++HY+ +
Sbjct: 1036 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 1095

Query: 644  IDLYGRSGKLEEAMEFI-EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
            ID+ GR+G+L++A+  + E+M  E D  IW++LL++CRIH N+++      +LF+LEP  
Sbjct: 1096 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK 1155

Query: 703  VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG-----GW 757
                 L+  +YA  GK ED  KVR+   E + R   G  WIE+   V++FV G     G+
Sbjct: 1156 PENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGF 1215

Query: 758  SE-----SYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGS 812
             E     S  ++  S +   P+ ++ +   S    EEE+ E++ G HSEKLAL + LI +
Sbjct: 1216 EEIKSLWSILEMKISKMGYRPDTMSVQHDLS----EEEKIEQLRG-HSEKLALTYGLIKT 1270

Query: 813  SQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQ 861
            S+   TIR+ KN+R+CV CH  AK +S +   EI + D+K  HHFKNG+
Sbjct: 1271 SEGT-TIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGE 1318



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 150/633 (23%), Positives = 279/633 (44%), Gaps = 106/633 (16%)

Query: 146  FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS------VL 199
            FL+V++ L         +LQA G   D E G+ +H LV     S   R+RN       ++
Sbjct: 435  FLLVREAL-------GLLLQASGKRKDIEMGRKIHQLV-----SGSTRLRNDDVLCTRII 482

Query: 200  AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CREEIKLGV 258
             +Y  CG    +R  F+++  K+   WN++IS Y +    DE    F +M    ++    
Sbjct: 483  TMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDH 542

Query: 259  VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLF-- 316
             T+  +I++   +    + + +   +   G+  DVF    ++S +  +G  + AL LF  
Sbjct: 543  FTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDI 602

Query: 317  ---------------------KEMSFV------------GVMPNGVTITSAISACTDLKA 343
                                  E SF+              MP+  T+ + +  C   + 
Sbjct: 603  MPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARERE 662

Query: 344  LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
            + +G  +H  AVK+    ++++ N+L++MYSKC  +  A+ +F M  +K+V SWN+M+ G
Sbjct: 663  IGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGG 722

Query: 404  YCQAGYCGKAYELFIKM----------------------QESDVPP-------------- 427
            +   G     +++  +M                       ES +P               
Sbjct: 723  FSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFV 782

Query: 428  -NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALG 486
             N +  N  ++ Y + G+   A  +F  +       +   SWN+LI G+ Q      +L 
Sbjct: 783  YNELVANAFVASYAKCGSLSYAQRVFHGI-----RSKTVNSWNALIGGHAQSNDPRLSLD 837

Query: 487  VFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
               +M+ S   P+  T+ S+L AC+ L +    KE+HG ++R  LE  L V  S++  Y 
Sbjct: 838  AHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYI 897

Query: 547  KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
              G +   + +FD M  K +++WN++I GY+ +GF   AL +F QM  +G++    + + 
Sbjct: 898  HCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMP 957

Query: 607  IILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS----AMIDLYGRSGKLEEAMEFIED 662
            +  A SL   + LG++        Y +  ++E  +    ++ID+Y ++G + ++ +    
Sbjct: 958  VFGACSLLPSLRLGRE-----AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNG 1012

Query: 663  MPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
            +  E  ++ W A++    IHG    A+   E +
Sbjct: 1013 LK-EKSTASWNAMIMGYGIHGLAKEAIKLFEEM 1044



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 223/490 (45%), Gaps = 59/490 (12%)

Query: 59   TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
            T + +L  C     I L + +H + + L  + ++ +   L+ +Y+KCGC+ +A+ +F+  
Sbjct: 649  TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 708

Query: 118  RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG--LFPDDFLFPKILQACGNCGDFEA 175
              +N+ +W+ M+G +S +       ++   M+  G  +  D+      +  C +     +
Sbjct: 709  NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 768

Query: 176  GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
             K +H   +K        V N+ +A Y KCG L +A+R F  +  K   +WN++I G+ Q
Sbjct: 769  LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 828

Query: 236  IGEND-----EAHRLFD---------KMCR--------EEIKLGVVTFNILIRS------ 267
               ND     +AH              +C         + ++LG      +IR+      
Sbjct: 829  --SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 886

Query: 268  ---------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
                     Y   G+      +   ME   +     +W  +I+G+ QNG   +AL +F++
Sbjct: 887  FVYLSVLSLYIHCGELCTVQALFDAMEDKSLV----SWNTVITGYLQNGFPDRALGVFRQ 942

Query: 319  MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
            M   G+   G+++     AC+ L +L +G E H+ A+K    DD  +  SLI+MY+K   
Sbjct: 943  MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 1002

Query: 379  LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
            +  + +VF+ +K+K   SWN+MI GY   G   +A +LF +MQ +   P+ +T+  +++ 
Sbjct: 1003 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 1062

Query: 439  YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL------------- 485
               +G   E +    +M  +  +K N   +  +I    + GQ + AL             
Sbjct: 1063 CNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV 1122

Query: 486  GVFRKMQSSC 495
            G+++ + SSC
Sbjct: 1123 GIWKSLLSSC 1132



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 214/492 (43%), Gaps = 56/492 (11%)

Query: 26   DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFL 83
            +T +      G  +    VL  +   G  V+ +  T +N +  C   + +   ++LH + 
Sbjct: 717  NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY- 775

Query: 84   NLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
            +L  E   +  V    ++ YAKCG L  A+ VF  +R + + +W+A+IG +++    R  
Sbjct: 776  SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 835

Query: 142  VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
            ++    M   GL PD F    +L AC        GK +H  +I+  +     V  SVL++
Sbjct: 836  LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 895

Query: 202  YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
            Y+ CG+L   +  F++M++K  V+WN++I+GY Q G  D A  +F +M    I+L  ++ 
Sbjct: 896  YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 955

Query: 262  NILIRSYNQLGQCDVAME----------------------MVKRMESLGITPDVF----- 294
              +  + + L    +  E                      M  +  S+  +  VF     
Sbjct: 956  MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE 1015

Query: 295  ----TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME- 349
                +W  MI G+  +G   +A+ LF+EM   G  P+ +T    ++AC     +  G+  
Sbjct: 1016 KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRY 1075

Query: 350  IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF--DMIKDKDVYSWNSMIAGYCQ- 406
            +  +    G   ++     +I+M  +  +L+ A RV   +M ++ DV  W S+++  C+ 
Sbjct: 1076 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS-CRI 1134

Query: 407  -------AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
                        K +EL     E + P N +  + L +G    G  ++   + QRM +  
Sbjct: 1135 HQNLEMGEKVAAKLFEL-----EPEKPENYVLLSNLYAGL---GKWEDVRKVRQRMNEMS 1186

Query: 460  KVKRNTASWNSL 471
              K    SW  L
Sbjct: 1187 LRKDAGCSWIEL 1198



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 138/297 (46%), Gaps = 16/297 (5%)

Query: 6    LTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQ 65
            L T Q L   +  KS   +      +L  NG  + A+ V   +   G ++   + + +  
Sbjct: 902  LCTVQALFDAMEDKSLVSWNTVITGYL-QNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 960

Query: 66   ACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYT 124
            AC    S+ L R+ HA+ L  + E D F+   L+ +YAK G +  + +VF  ++E++  +
Sbjct: 961  ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 1020

Query: 125  WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLV 183
            W+AMI  Y      +E ++LF  M + G  PDD  F  +L AC + G    G + +  + 
Sbjct: 1021 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 1080

Query: 184  IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF-ESMDEKDGVA-WNSMISG-----YFQI 236
               G+    +    V+ +  + G+L  A R   E M E+  V  W S++S        ++
Sbjct: 1081 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 1140

Query: 237  GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
            GE   A +LF+ +  E+ +  V+  N+    Y  LG+ +   ++ +RM  + +  D 
Sbjct: 1141 GEK-VAAKLFE-LEPEKPENYVLLSNL----YAGLGKWEDVRKVRQRMNEMSLRKDA 1191


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 258/802 (32%), Positives = 405/802 (50%), Gaps = 90/802 (11%)

Query: 76  ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           AR+L   + L    +VF    LLS++AK G L DAR VF +M ER+  +W+ M+   +R 
Sbjct: 84  ARRLFDEIPLARR-NVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRA 142

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
            R+ E ++    M  DG  P  F    +L +C        G+ +HS V+KLG+     V 
Sbjct: 143 GRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVA 202

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           NSVL +Y KCG    A   FE M  +   +WN                            
Sbjct: 203 NSVLNMYGKCGDSETATTVFERMPVRSVSSWN---------------------------- 234

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD--VFTWTCMISGFAQNGRTSQAL 313
             +V+ N        LG+ D+A  + + M      PD  + +W  MI+G+ QNG  ++AL
Sbjct: 235 -AMVSLN------THLGRMDLAESLFESM------PDRSIVSWNAMIAGYNQNGLDAKAL 281

Query: 314 DLFKEMSFVGVM-PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
            LF  M     M P+  TITS +SAC +L  + +G ++H+  ++     +  V N+LI+ 
Sbjct: 282 KLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIST 341

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y+K                               +G    A  +  +  E+D+  NVI++
Sbjct: 342 YAK-------------------------------SGSVENARRIMDQSMETDL--NVISF 368

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
             L+ GY++ G+ + A ++F  M   D V     +W ++I GY+Q G+ + A+ +FR M 
Sbjct: 369 TALLEGYVKIGDMESAREMFGVMNNRDVV-----AWTAMIVGYEQNGRNDEAIDLFRSMI 423

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
           +    PN  T+ +VL  CA L   +  K+IH   +R  LE S  V N++I  YA+SG+  
Sbjct: 424 TCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFP 483

Query: 553 YSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
           ++R +FD +   K+ ITW S+I     HG    A+ LF++M   G++P+R T++ ++ A 
Sbjct: 484 WARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSAC 543

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
           S AG V+ GK+ +  I   +QI P + HY+ M+DL  R+G   EA EFI  MP+EPD+  
Sbjct: 544 SHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIA 603

Query: 672 WEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
           W +LL+ACR+H N +LA LA E+L  ++P +      I  +Y+ CG+  DA ++ K  +E
Sbjct: 604 WGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKE 663

Query: 732 NTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC----- 786
              R   G  W  +++ ++ F          D +Y+    + E +        L      
Sbjct: 664 KAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHD 723

Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
           +++E KEE+   HSEKLA+AF LI S+    T+R++KN+R+C  CH   K +S +   EI
Sbjct: 724 VDDELKEELLSRHSEKLAIAFGLI-STPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREI 782

Query: 847 FLADSKCLHHFKNGQCSCGDYW 868
            + D+   HHF++G CSC DYW
Sbjct: 783 IVRDATRFHHFRDGLCSCKDYW 804



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/586 (25%), Positives = 257/586 (43%), Gaps = 128/586 (21%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK----CGKLIWARRFF 215
           + ++LQ C    +  AG+ +H+  +K G+     + N++L+ Y +     G L  ARR F
Sbjct: 29  YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88

Query: 216 E--SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
           +   +  ++   WNS++S + + G   +A  +F +M   +     V++ +++   N+ G+
Sbjct: 89  DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERD----AVSWTVMVVGLNRAGR 144

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
              A++ +  M + G TP  F                                   T+T+
Sbjct: 145 FGEAIKTLLDMTADGFTPTQF-----------------------------------TLTN 169

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            +S+C   +A A+G ++HS  VK+G    V V NS++NMY KC + E A  VF+ +  + 
Sbjct: 170 VLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPVRS 229

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ 453
           V SWN+M++     G    A  LF  M +     ++++WN +I+GY QNG + +A+ LF 
Sbjct: 230 VSSWNAMVSLNTHLGRMDLAESLFESMPDR----SIVSWNAMIAGYNQNGLDAKALKLFS 285

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
           RM                                   +  S   P+  TI SVL ACA L
Sbjct: 286 RM-----------------------------------LHESSMAPDEFTITSVLSACANL 310

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG------------- 560
                 K++H  +LR  +  +  V N+LI TYAKSG++  +R I D              
Sbjct: 311 GNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTA 370

Query: 561 --------------------MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
                               M+++D++ W ++I GY  +G    A+DLF  M + G +PN
Sbjct: 371 LLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPN 430

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS----AMIDLYGRSGKLEEA 656
             T  +++   +    +D GK++      C  I  ++E  S    A+I +Y RSG    A
Sbjct: 431 SYTLAAVLSVCASLACLDYGKQI-----HCRAIRSLLEQSSSVSNAIITMYARSGSFPWA 485

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF--DLEP 700
               + +    ++  W +++ A   HG  + AV   E +    +EP
Sbjct: 486 RRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEP 531



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/511 (24%), Positives = 224/511 (43%), Gaps = 78/511 (15%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVK 94
           GR  EAI  L  +   G    + T  N+L +C  + +  + RK+H+F + L     V V 
Sbjct: 143 GRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVA 202

Query: 95  TKLLSVYAKC-------------------------------GCLDDAREVFEDMRERNLY 123
             +L++Y KC                               G +D A  +FE M +R++ 
Sbjct: 203 NSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIV 262

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
           +W+AMI  Y+++    + ++LF  M+ +  + PD+F    +L AC N G+   GK +H+ 
Sbjct: 263 SWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY 322

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD--GVAWNSMISGYFQIGEND 240
           +++  M+   +V N++++ Y K G +  ARR  +   E D   +++ +++ GY +IG+ +
Sbjct: 323 ILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 382

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            A  +F  M   +    VV +  +I  Y Q G+ D A+++ + M + G  P         
Sbjct: 383 SAREMFGVMNNRD----VVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEP--------- 429

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
                                     N  T+ + +S C  L  L  G +IH  A++    
Sbjct: 430 --------------------------NSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 463

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMI-KDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
               V N++I MY++      A R+FD +   K+  +W SMI    Q G   +A  LF +
Sbjct: 464 QSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEE 523

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M  + V P+ IT+  ++S     G  +E    + ++    ++    + +  ++    + G
Sbjct: 524 MLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAG 583

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             + A    R+M      P+ +   S+L AC
Sbjct: 584 LFSEAQEFIRRMP---VEPDAIAWGSLLSAC 611



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 169/346 (48%), Gaps = 18/346 (5%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           L+     S S+  AR++    ++ T+++V   T LL  Y K G ++ ARE+F  M  R++
Sbjct: 338 LISTYAKSGSVENARRIMD-QSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 396

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
             W+AMI  Y ++ R  E ++LF  M+  G  P+ +    +L  C +    + GK +H  
Sbjct: 397 VAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCR 456

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDE 241
            I+  +     V N+++ +Y + G   WARR F+ +   K+ + W SMI    Q G+ +E
Sbjct: 457 AIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE 516

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMI 300
           A  LF++M R  ++   +T+  ++ + +  G  +       ++++   I P++  + CM+
Sbjct: 517 AVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMV 576

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV-KMGF 359
              A+ G  S+A +  + M    V P+ +   S +SAC   K      E+  LA  K+  
Sbjct: 577 DLLARAGLFSEAQEFIRRMP---VEPDAIAWGSLLSACRVHK----NAELAELAAEKLLS 629

Query: 360 TDDVLVG--NSLINMYSKCEELEAAERVFDMIKDKDV-----YSWN 398
            D    G  +++ N+YS C     A R++   K+K V     +SW 
Sbjct: 630 IDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWT 675



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 12/206 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NGR +EAI +  S+ T G +    T   +L  C     +   +++H   +  + E    V
Sbjct: 409 NGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSV 468

Query: 94  KTKLLSVYAKCGCLDDAREVFEDM-RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              ++++YA+ G    AR +F+ +   +   TW++MI A ++  +  E V LF  M++ G
Sbjct: 469 SNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAG 528

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLV-----IKLGMSCVRRVRNSVLAVYVKCGK 207
           + PD   +  +L AC + G    GK  +  +     I   MS        ++ +  + G 
Sbjct: 529 VEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY----ACMVDLLARAGL 584

Query: 208 LIWARRFFESMD-EKDGVAWNSMISG 232
              A+ F   M  E D +AW S++S 
Sbjct: 585 FSEAQEFIRRMPVEPDAIAWGSLLSA 610


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 272/861 (31%), Positives = 443/861 (51%), Gaps = 63/861 (7%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           +Y  LL  C  + S+    ++HA +       D  ++  L+++Y+KC     AR++ ++ 
Sbjct: 58  SYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDES 117

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            E +L +WSA+I  Y+++      +  F  M   G+  ++F F  +L+AC    D   GK
Sbjct: 118 SEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGK 177

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H +V+  G      V N+++ +Y KC + + ++R F+ + E++ V+WN++ S Y Q  
Sbjct: 178 QVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXD 237

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
              EA  LF +M    IK    + + ++ +   L        +   +  LG   D F+  
Sbjct: 238 FCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSAN 297

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT-------DLKALA-MGME 349
            ++  +A+ G  + A+ +F+++      P+ V+  + I+ C         L+ L  M  +
Sbjct: 298 ALVDMYAKVGDLADAISVFEKIK----QPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQ 353

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +HS  +KM    D+ V   L++MYSKC+ LE A   F+++ +KD+ +WN++I+GY Q   
Sbjct: 354 LHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWE 413

Query: 410 CGKAYELFIKMQESDVPPNVITW-----------------------------------NV 434
             +A  LF++M +  +  N  T                                    N 
Sbjct: 414 DMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNS 473

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           LI  Y +  + ++A  +F+     D V     S+ S+I  Y Q GQ   AL +F +MQ  
Sbjct: 474 LIDSYGKCSHVEDAERIFEECTIGDLV-----SFTSMITAYAQYGQGEEALKLFLEMQDM 528

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              P+     S+L ACA L A  + K++H  +L+      +   NSL++ YAK G+I  +
Sbjct: 529 ELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDA 588

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
              F  ++ + I++W+++I G   HG    AL LF+QM   G+ PN  T +S++ A + A
Sbjct: 589 GRAFSELTERGIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHA 648

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G+V   K  F S+ E +   PM EHY+ MIDL GR+GK+ EA+E +  MP E ++S+W A
Sbjct: 649 GLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGA 708

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           LL A RIH +++L   A E LF LEP       L+  IYA  GK E+  +VR+L R++  
Sbjct: 709 LLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKV 768

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------IE 788
           +   G  WIEVK+ VYTF+ G  S   S  +Y+ L  +  ++  ++ +  +       +E
Sbjct: 769 KKEPGMSWIEVKDKVYTFLVGDRSHYRSQEIYAKLDEL-SDLMDKAGYVPMVEIDLHDVE 827

Query: 789 EEEKEEISGIHSEKLALAFALIGSSQ-APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIF 847
           + EKE +   HSEKLA+AF LI + Q AP  IR+ KN+R+CV CH   KY+  +   EI 
Sbjct: 828 QSEKELLLYHHSEKLAVAFGLIATPQGAP--IRVKKNLRVCVDCHTAFKYICKIVSREII 885

Query: 848 LADSKCLHHFKNGQCSCGDYW 868
           + D    HHFK+G CSCGDYW
Sbjct: 886 VRDINRFHHFKDGSCSCGDYW 906



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 146/520 (28%), Positives = 257/520 (49%), Gaps = 49/520 (9%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           NG    A+     +   G K    T+ ++L+AC     + + +++H  + +   E DVFV
Sbjct: 135 NGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFV 194

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +YAKC    D++ +F+++ ERN+ +W+A+   Y +     E V LF+ MV  G+
Sbjct: 195 ANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGI 254

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P++F    ++ AC    D   GK++H  +IKLG        N+++ +Y K G L  A  
Sbjct: 255 KPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAIS 314

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG- 272
            FE + + D V+WN++I+G      +++A  L  +M R ++   ++  ++    +  +G 
Sbjct: 315 VFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKR-QLHSSLMKMDMESDLFVSVGL 373

Query: 273 -----QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
                +CD+ +E  +   +L    D+  W  +ISG++Q     +AL LF EM   G+  N
Sbjct: 374 VDMYSKCDL-LEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFN 432

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             T+++ + +   L+ + +  ++H L+VK GF  D+ V NSLI+ Y KC  +E AER+F+
Sbjct: 433 QTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFE 492

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP-------------------- 427
                D+ S+ SMI  Y Q G   +A +LF++MQ+ ++ P                    
Sbjct: 493 ECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQ 552

Query: 428 ---------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                          ++   N L++ Y + G+ D+A   F  +      +R   SW+++I
Sbjct: 553 GKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSEL-----TERGIVSWSAMI 607

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
            G  Q G    AL +F +M      PN +T++SVL AC +
Sbjct: 608 GGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNH 647



 Score =  208 bits (530), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 149/592 (25%), Positives = 283/592 (47%), Gaps = 43/592 (7%)

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
           +  +S D +   ++ L    +  G F P    + K+L  C        G  +H+ + K G
Sbjct: 31  VPQFSEDPQTTAILNL----IDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86

Query: 188 MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
           +S    +RN ++ +Y KC    +AR+  +   E D V+W+++ISGY Q G    A   F 
Sbjct: 87  LSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146

Query: 248 KMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF------------- 294
           +M    +K    TF+ ++++ + +    +  ++   +   G   DVF             
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCD 206

Query: 295 ------------------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
                             +W  + S + Q     +A+ LF EM   G+ PN  +++S ++
Sbjct: 207 EFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVN 266

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           ACT L+  + G  IH   +K+G+  D    N+L++MY+K  +L  A  VF+ IK  D+ S
Sbjct: 267 ACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVS 326

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED--EAVDLFQ- 453
           WN++IAG     +  +A EL  +M+   +  +++  ++    ++  G  D     DL + 
Sbjct: 327 WNAVIAGCVLHEHHEQALELLGQMKRQ-LHSSLMKMDMESDLFVSVGLVDMYSKCDLLED 385

Query: 454 -RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
            RM  N   +++  +WN++I+GY Q  +   AL +F +M       N  T+ ++L + A 
Sbjct: 386 ARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAG 445

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 572
           L   +  +++HG  ++    S + V+NSLID+Y K  ++  +  IF+  +  D++++ S+
Sbjct: 446 LQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSM 505

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQ 632
           I  Y  +G    AL LF +M+   LKP+R    S++ A +     + GK++   I + Y 
Sbjct: 506 ITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILK-YG 564

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
            +  I   ++++++Y + G +++A     ++  E     W A++     HG+
Sbjct: 565 FVLDIFAGNSLVNMYAKCGSIDDAGRAFSEL-TERGIVSWSAMIGGLAQHGH 615



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 70/153 (45%)

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           LI    Q  +      +   +    F P  V+   +L  C    +     +IH  + +  
Sbjct: 27  LIQTVPQFSEDPQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSG 86

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           L     + N LI+ Y+K     Y+R + D  S  D+++W++LI GY  +G    AL  F 
Sbjct: 87  LSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFH 146

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           +M   G+K N  TF S++ A S+   + +GK+V
Sbjct: 147 EMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQV 179


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 247/796 (31%), Positives = 414/796 (52%), Gaps = 85/796 (10%)

Query: 80  HAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
           H   N +     F    +LS YAK G L+ A +VF+ +  R+  +W+ +I  Y++  R+ 
Sbjct: 30  HDLFNEMPVKTTFSWNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFE 89

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           + +++F  MV+D + P  F    +L +C   G    GK +HS V+KLG+     V NS+L
Sbjct: 90  DAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLL 149

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +Y K G L  A+  F+ M  ++  +WN+MIS +   G  D A   F+ +          
Sbjct: 150 NMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSER------- 202

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE- 318
                                           D+ +W  MI+G  Q+G  ++AL  F   
Sbjct: 203 --------------------------------DIVSWNSMIAGCNQHGFDNEALQFFSSI 230

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           +    + P+  ++ SA+SAC +L+ L+ G +IH   V+  F     VGN+LI+MY+K   
Sbjct: 231 LKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGG 290

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           +E A R+ +                  Q+G              SD+  +VI +  L++G
Sbjct: 291 VEIARRIIE------------------QSGI-------------SDL--DVIAFTALLNG 317

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
           Y++ G+   A  +F  +   D V     +W ++I GY Q G  N+A+ VF+ M S    P
Sbjct: 318 YVKLGDITPARQIFNSLKDPDVV-----AWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRP 372

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           N  T+ ++L A + + + N  K+IH   +R     S  V N+L   YAK+G+I  +R +F
Sbjct: 373 NSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVF 432

Query: 559 DGM-SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           + +  ++D ++W S+I     HG    A++LF+QM + G+KP+  T++ ++ A +  G+V
Sbjct: 433 NLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLV 492

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
           + G+  F  +   ++I P + HY+ M+DL+GR+G L+EA +F+E+MP+EPD   W +LL+
Sbjct: 493 EQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLS 552

Query: 678 ACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNS 737
           +C+++ N+DLA +A ERL  +EP +      +  +Y+ CGK +DA K+RKL +    +  
Sbjct: 553 SCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAKIRKLMKARGVKKE 612

Query: 738 FGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT----ARSSHSGLC-IEEEEK 792
            G  W++++N  + F          D +Y  +  + + +     A  + S L  +E E K
Sbjct: 613 QGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKKMGFAPDTESVLHDLEVEVK 672

Query: 793 EEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
           ++I   HSEKLA+AF +I + +   T+RI+KN+R+C  CH   K++S +   EI + D+ 
Sbjct: 673 DQILRYHSEKLAIAFGIISTPENT-TLRIMKNLRVCNDCHNAIKFISKLVDREIIVRDAT 731

Query: 853 CLHHFKNGQCSCGDYW 868
             HHFK+G CSC DYW
Sbjct: 732 RFHHFKDGSCSCKDYW 747



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 136/550 (24%), Positives = 251/550 (45%), Gaps = 114/550 (20%)

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           ++KLG++    + N+++ +Y K G  + A   F  M  K   +WN+++SGY + G+ ++A
Sbjct: 1   MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
           H++FD +   +     V++  +I  YNQ+G+ + A+++   M    + P  F        
Sbjct: 61  HQVFDLIPVRD----SVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQF-------- 108

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
                                      T+T+ +++C    +  +G ++HS  VK+G    
Sbjct: 109 ---------------------------TLTNVLASCAATGSRGIGKKVHSFVVKLGLHAC 141

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V V NSL+NMY+K  +L+ A+ VFD +K ++  SWN+MI+ +   G    A   F  + E
Sbjct: 142 VPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSE 201

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
            D    +++WN +I+G  Q+G ++EA+  F  + K+  +K                    
Sbjct: 202 RD----IVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLK-------------------- 237

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
                          P+  ++ S L ACA L   +  K+IHG ++R   ++S  V N+LI
Sbjct: 238 ---------------PDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALI 282

Query: 543 DTYAKS---------------------------------GNIVYSRTIFDGMSSKDIITW 569
             YAKS                                 G+I  +R IF+ +   D++ W
Sbjct: 283 SMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAW 342

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS-IT 628
            ++I GYV +G  + A+++F  M S G +PN  T  +++ A S    ++ GK++  S I 
Sbjct: 343 TAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIR 402

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
               + P + +  A+  +Y ++G +  A +    +    D+  W +++ A   HG  + A
Sbjct: 403 SGEALSPSVGN--ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEA 460

Query: 689 VLAIERLFDL 698
           +   E++  L
Sbjct: 461 IELFEQMLTL 470



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 126/511 (24%), Positives = 226/511 (44%), Gaps = 78/511 (15%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVK 94
           GR  +AI +   +        + T  N+L +C  + S  + +K+H+F + L     V V 
Sbjct: 86  GRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVA 145

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY-----------------SRD-Q 136
             LL++YAK G L  A+ VF+ M+ RN  +W+AMI  +                  RD  
Sbjct: 146 NSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIV 205

Query: 137 RW-------------REVVELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            W              E ++ F  +++D  L PD F     L AC N      GK +H  
Sbjct: 206 SWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGY 265

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE--SMDEKDGVAWNSMISGYFQIGEND 240
           +++        V N+++++Y K G +  ARR  E   + + D +A+ ++++GY ++G+  
Sbjct: 266 IVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDIT 325

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            A ++F+ +   +    VV +  +I  Y Q G  + A+E+ K M S G  P+ FT   M 
Sbjct: 326 PARQIFNSLKDPD----VVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAM- 380

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
                                             +SA + + +L  G +IH+ A++ G  
Sbjct: 381 ----------------------------------LSASSSVTSLNHGKQIHASAIRSGEA 406

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
               VGN+L  MY+K   +  A +VF++++ ++D  SW SMI    Q G   +A ELF +
Sbjct: 407 LSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQ 466

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M    + P+ IT+  ++S     G  ++    F  M    K+    + +  ++  + + G
Sbjct: 467 MLTLGIKPDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAG 526

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               A   ++ +++    P+ +   S+L +C
Sbjct: 527 LLQEA---YKFVENMPMEPDVIAWGSLLSSC 554



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 194/425 (45%), Gaps = 92/425 (21%)

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           VK+G T  V + N+L+N+Y+K      A  +F+ +  K  +SWN++++GY + G   KA+
Sbjct: 2   VKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKAH 61

Query: 415 ELFIKMQESDVPP--NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
           ++F      D+ P  + ++W  +I GY Q G  ++A+ +F  M K DKV           
Sbjct: 62  QVF------DLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVK-DKV----------- 103

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
                                    P   T+ +VL +CA   +    K++H  V++  L 
Sbjct: 104 ------------------------LPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLH 139

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGM------------------------------- 561
           + +PV NSL++ YAK+G++  ++ +FD M                               
Sbjct: 140 ACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELL 199

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQ-MKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           S +DI++WNS+I G   HGF + AL  F   +K   LKP+R +     LA +L+   +L 
Sbjct: 200 SERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFS-----LASALSACANLE 254

Query: 621 KKVFCSITECYQIIPMIEHY----SAMIDLYGRSGKLEEAMEFIEDMPI-EPDSSIWEAL 675
           K  F      Y +  M +      +A+I +Y +SG +E A   IE   I + D   + AL
Sbjct: 255 KLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTAL 314

Query: 676 LTACRIHGNIDLAVLAIERLFD-LEPGDVLIQRLILQIYAICGKPEDALKVRK-LERENT 733
           L      G+I  A     ++F+ L+  DV+    ++  Y   G   DA++V K +  E  
Sbjct: 315 LNGYVKLGDITPA----RQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGP 370

Query: 734 RRNSF 738
           R NSF
Sbjct: 371 RPNSF 375



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 129/267 (48%), Gaps = 15/267 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTE-IDVFV 93
           NG  N+AI V  ++ ++G +    T   +L A     S++  +++HA      E +   V
Sbjct: 352 NGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSV 411

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              L ++YAK G ++ AR+VF  +R+ R+  +W++MI A ++     E +ELF  M+  G
Sbjct: 412 GNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLG 471

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV------LAVYVKCG 206
           + PD   +  +L AC + G  E G+    L     M  V ++  ++      + ++ + G
Sbjct: 472 IKPDHITYVGVLSACTHGGLVEQGRSYFDL-----MKNVHKIDPTLSHYACMVDLFGRAG 526

Query: 207 KLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            L  A +F E+M  E D +AW S++S        D A    +++   E       ++ L 
Sbjct: 527 LLQEAYKFVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPN-NSGAYSALA 585

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPD 292
             Y+  G+ D A ++ K M++ G+  +
Sbjct: 586 NVYSSCGKWDDAAKIRKLMKARGVKKE 612


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 267/850 (31%), Positives = 423/850 (49%), Gaps = 122/850 (14%)

Query: 61  INLLQACIDSNSIHLARKLHAFL--NLVTEIDVFVKTKLLSVY----------------- 101
           ++LLQ+ I S    + R +HA +  + +  + VF+   LL++Y                 
Sbjct: 16  VHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMP 75

Query: 102 --------------AKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
                         AK G LD AR VF+++ + +  +W+ MI  Y+    ++  V  F  
Sbjct: 76  LKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLR 135

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           MV  G+ P  F F  +L +C      + GK +HS V+KLG S V  V NS+L +Y KCG 
Sbjct: 136 MVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGD 195

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
            + A+  F+ M  KD   WN+MIS + Q  + D A  LFD+M                  
Sbjct: 196 SVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMT----------------- 238

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMP 326
                                  PD+ +W  +I+G+   G   +AL+ F  M     + P
Sbjct: 239 ----------------------DPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKP 276

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           +  T+ S +SAC + ++L +G +IH+  V+        VGN+LI+MY+K   +E A R+ 
Sbjct: 277 DKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIV 336

Query: 387 DMIKDK--DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           ++      +V ++ S++ GY + G    A  +F  ++  D    V+ W  +I GY QNG 
Sbjct: 337 EITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRD----VVAWTAMIVGYAQNG- 391

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
                                     LI+         +AL +FR M      PN  T+ 
Sbjct: 392 --------------------------LIS---------DALVLFRLMIREGPKPNNYTLA 416

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS- 563
           +VL   + L + +  K++H   +R    SS+ V N+LI  Y++SG+I  +R IF+ + S 
Sbjct: 417 AVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSY 476

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           +D +TW S+I     HG  + A++LF++M    LKP+  T++ ++ A +  G+V+ GK  
Sbjct: 477 RDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKSY 536

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           F  +   + I P   HY+ MIDL GR+G LEEA  FI +MPIEPD   W +LL++CR+H 
Sbjct: 537 FNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVHK 596

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
            +DLA +A E+L  ++P +      +    + CGK EDA KVRK  ++   +   G  W+
Sbjct: 597 YVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDKAVKKEQGFSWV 656

Query: 744 EVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA----RSSHSGLC-IEEEEKEEISGI 798
           ++KN V+ F          D +Y  +  + + +        ++S L  +E+E KE+I   
Sbjct: 657 QIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKMGFIPDTNSVLHDLEQEVKEQILRH 716

Query: 799 HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
           HSEKLA+AFALI + +   T+RI+KN+R+C  CH   +Y+S++   EI + D+   HHFK
Sbjct: 717 HSEKLAIAFALINTPKHT-TVRIMKNLRVCNDCHSAIRYISLLVEREIIVRDATRFHHFK 775

Query: 859 NGQCSCGDYW 868
           +G CSC DYW
Sbjct: 776 DGSCSCQDYW 785



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 228/511 (44%), Gaps = 78/511 (15%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF-VK 94
           G    A+     + + G    + T+ N+L +C  + ++ + +K+H+F+  + +  V  V 
Sbjct: 124 GLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVA 183

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR-----------DQ------- 136
             LL++YAKCG    A+ VF+ MR ++  TW+ MI  + +           DQ       
Sbjct: 184 NSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIV 243

Query: 137 RWREVV-------------ELF-FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            W  ++             E F F++    L PD F    +L AC N    + GK +H+ 
Sbjct: 244 SWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAH 303

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE--SMDEKDGVAWNSMISGYFQIGEND 240
           +++  +     V N+++++Y K G +  A R  E       + +A+ S++ GYF+IG+ D
Sbjct: 304 IVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDID 363

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            A  +FD +                                          DV  WT MI
Sbjct: 364 PARAIFDSLKHR---------------------------------------DVVAWTAMI 384

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
            G+AQNG  S AL LF+ M   G  PN  T+ + +S  + L +L  G ++H++A+++   
Sbjct: 385 VGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEV 444

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMI-KDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             V VGN+LI MYS+   ++ A ++F+ I   +D  +W SMI    Q G   +A ELF K
Sbjct: 445 SSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEK 504

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M   ++ P+ IT+  ++S     G  ++    F  M     ++  ++ +  +I    + G
Sbjct: 505 MLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAG 564

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               A    R M      P+ V   S+L +C
Sbjct: 565 LLEEAYNFIRNMP---IEPDVVAWGSLLSSC 592


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 267/842 (31%), Positives = 422/842 (50%), Gaps = 73/842 (8%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D+F+   LLS+Y KC  + +AR++F++M  R++ +W+ ++ AY +     E +ELF  M+
Sbjct: 49  DMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSML 108

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             G +P++F     L++C    +F  G    +LV K G      + ++++  Y KCG   
Sbjct: 109 ISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQ 168

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A R FE M+  D V+W  M+S + + G   +A +L+ +M +  +     TF  L+ + +
Sbjct: 169 EAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASS 228

Query: 270 QLG-------------------------------QCDVAMEMVKRMESLGITPDVFTWTC 298
            LG                               +C    + VK +  L +  DVF WT 
Sbjct: 229 FLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVK-VSKLTLEYDVFLWTA 287

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           +ISGF Q+ +  +A+  F EM   GV+PN  T +  ++AC+ + AL +G +IHS  V  G
Sbjct: 288 IISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAG 347

Query: 359 FTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
             +DV VGNSL++MY KC  + E A R F  I   +V SW S+IAG+ + G   ++ ++F
Sbjct: 348 LENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVF 407

Query: 418 IKMQESDVPPNVITWNVLIS---------------GYIQNGNEDE-------AVDLFQRM 455
             MQ   V PN  T + ++                GYI   N D         VD +  +
Sbjct: 408 GAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGL 467

Query: 456 GKNDKV--------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           G  D           R+  ++ SL     Q G    AL +   M       +  ++ S L
Sbjct: 468 GMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFL 527

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
            A A +      K++H   ++  L S + V N L+D Y K G I  +   F  ++  D +
Sbjct: 528 SAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFLEITEPDAV 587

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
           +WN LI G   +G   +AL  F+ M+  G++P++ T L ++ A S  G+VD+G   F S+
Sbjct: 588 SWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSM 647

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
            E + I P ++HY  ++DL GR+G+LEEAM  IE MP +PD+ I++ LL AC++HGNI L
Sbjct: 648 REKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKLHGNIPL 707

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
                 +  +L+P D     L+  +Y   G+ E   K R++ RE   R + GQ W+E +N
Sbjct: 708 GEHMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSWMEERN 767

Query: 748 LVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAF 807
           +V+ F  G  S      ++  +    E++ A+  + G+  +E         HSEKLA+AF
Sbjct: 768 MVHLFTAGDTSHPQIGKIHEKI----ESLIAQFRNQGIWYQENRA---LAHHSEKLAVAF 820

Query: 808 ALIGS-SQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGD 866
            LI +  +AP  IRI+KNIR+C  CH+    V+ +   EI + D    H FK G+CSC  
Sbjct: 821 GLISTPPKAP--IRIIKNIRICRDCHDFIMNVTRLVDREIIVRDGNRFHSFKKGECSCRG 878

Query: 867 YW 868
           YW
Sbjct: 879 YW 880



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 164/364 (45%), Gaps = 10/364 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYI--NLLQACIDSNSIHLARKLHAF-LNLVTEIDV 91
           +G   E+I V    A QG  VR N++    +L AC    S+   RKLH + +    + DV
Sbjct: 397 HGLEEESIKVFG--AMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDV 454

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            V   L+  YA  G +DDA  V   M+ R++ T++++    ++       + +   M +D
Sbjct: 455 VVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKD 514

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            +  D F     L A       E GK +H   +K G+     V N ++ +Y KCG +  A
Sbjct: 515 DVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDA 574

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
            R F  + E D V+WN +I G    G    A   F+ M    ++   +T  +++ + +  
Sbjct: 575 HRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHG 634

Query: 272 GQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  D+ ++  + M E  GI P +  + C++    + GR  +A+++ + M F    P+ + 
Sbjct: 635 GLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPF---KPDALI 691

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
             + + AC     + +G  +    +++  +D       L N+Y      E  E+   M++
Sbjct: 692 YKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFY-VLLANLYDDSGRSELGEKTRRMMR 750

Query: 391 DKDV 394
           ++ V
Sbjct: 751 ERGV 754



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/469 (22%), Positives = 193/469 (41%), Gaps = 40/469 (8%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKT 95
           +  EAIT    + T G      TY  +L AC    ++ L +++H+ + +   E DV V  
Sbjct: 297 KFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGN 356

Query: 96  KLLSVYAKCG-CLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
            L+ +Y KC   ++DA   F  +   N+ +W+++I  +S      E +++F  M   G+ 
Sbjct: 357 SLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVR 416

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+ F    IL ACG        + +H  +IK        V N+++  Y   G +  A   
Sbjct: 417 PNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHV 476

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK---------LGVVTFNILI 265
              M  +D + + S+ +   Q G ++ A  +   M +++++         L       ++
Sbjct: 477 TSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIM 536

Query: 266 RSYNQL-----------------------GQCDVAMEMVKRMESLGIT-PDVFTWTCMIS 301
            +  QL                       G+C    +  +    L IT PD  +W  +I 
Sbjct: 537 ETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSF--LEITEPDAVSWNGLIF 594

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFT 360
           G A NG  S AL  F++M   GV P+ +T    + AC+    + MG++   S+  K G  
Sbjct: 595 GLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDMGLDYFQSMREKHGIR 654

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
             +     L+++  +   LE A  V + +  K        + G C+  +        +  
Sbjct: 655 PQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGACKL-HGNIPLGEHMAR 713

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
           Q  ++ P+   + VL++    +    E  +  +RM +   V++N   SW
Sbjct: 714 QGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPGQSW 762


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 278/825 (33%), Positives = 419/825 (50%), Gaps = 115/825 (13%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR--NSVLAVYVKC 205
           M+  G  PD+F FP +L+A     +   GK +H+ V K G      V   N+++ +Y KC
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---- 261
           G L  A + F+ + E+D V+WNS+IS   +  E + A + F  M  E  +    T     
Sbjct: 61  GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120

Query: 262 ---------------------------------NILIRSYNQLGQCDVAMEMVKRMESLG 288
                                            N L+  Y +LG+ D A  ++   E   
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFED-- 178

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
              D+ TW  MIS F+QN R  +AL   + M   GV P+GVT  S + AC+ L  L  G 
Sbjct: 179 --RDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGK 236

Query: 349 EIHSLAVKMGFTDDVL----VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
           EIH+ A++   TDDV+    VG++L++MY  C ++E+   VFD + D+ +  WN+MIAGY
Sbjct: 237 EIHAYALR---TDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGY 293

Query: 405 CQAGYCGKAYELFIKMQ------------ESDVPPNV----ITWNVLISGY-IQNGNE-- 445
            Q+ +  KA  LFI+M+             S VP  V    I+    I GY I+ G E  
Sbjct: 294 AQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETN 353

Query: 446 ----DEAVDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQ- 492
               +  +D++ RMG     KR        +  SWN++I  Y   G+ ++AL +  +MQ 
Sbjct: 354 RYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQR 413

Query: 493 ---------------SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
                             F PN +T+++VLP CA L A  K KEIH   +R  L S + V
Sbjct: 414 IEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTV 473

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG- 596
            ++L+D YAK G +  +R +FD M  +++ITWN +I  Y +HG    +L+LF+ M + G 
Sbjct: 474 GSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGA 533

Query: 597 ----LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
               +KP   TF+++  + S +GMVD G  +F  +   + I P  +HY+ ++DL GR+GK
Sbjct: 534 KGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGK 593

Query: 653 LEEAMEFIEDMPIEPDS-SIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
           +EEA   +  MP   D    W +LL ACRI+ NI++  +A E L  L+P       L+  
Sbjct: 594 VEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSN 653

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN 771
           IY+  G  + A+ +R+  +    +   G  WIE  + V+ F+ G  S   S+ L+ +L+ 
Sbjct: 654 IYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLET 713

Query: 772 VPENV--------TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
           + E +        TA   H    I+EEEKE I   HSEKLA+AF ++ +     TIR+ K
Sbjct: 714 LSERLKKEGYVPDTACVLHD---IDEEEKETILCGHSEKLAIAFGILNTPPGT-TIRVAK 769

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+R+C  CH  +K++S +   EI L D++  HHFK+G CSCGDYW
Sbjct: 770 NLRVCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 160/624 (25%), Positives = 271/624 (43%), Gaps = 101/624 (16%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACID---SNSIHLARKLHAFLNLVTEIDVFVKTKL 97
           AI     +  +G +    T +++  AC +    + + L +++H           F    L
Sbjct: 97  AIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHWRTFSNNAL 156

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           +++YAK G LDDA+ +     +R+L TW++MI ++S+++R+ E +    LMV +G+ PD 
Sbjct: 157 MAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDG 216

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA-VYVKCGKLIWARRFFE 216
             F  +L AC +      GK +H+  ++           S L  +Y  CG++   R  F+
Sbjct: 217 VTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFD 276

Query: 217 S-MDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-------------------------- 249
           S +D K G+ WN+MI+GY Q   +++A  LF +M                          
Sbjct: 277 SVLDRKIGL-WNAMIAGYAQSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGI 335

Query: 250 CREE------IKLGVVTF----NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
            R+E      IK G+ T     N LI  Y+++G    +  +   ME      D+ +W  +
Sbjct: 336 SRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMED----RDIVSWNTI 391

Query: 300 ISGFAQNGRTSQALDLFKEMSF----------------VGVMPNGVTITSAISACTDLKA 343
           I+ +   GR+S AL L  EM                  V   PN +T+ + +  C  L A
Sbjct: 392 ITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSA 451

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           LA G EIH+ A++      V VG++L++MY+KC  L  A RVFD +  ++V +WN +I  
Sbjct: 452 LAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMA 511

Query: 404 YCQAGYCGKAYELFIKM-----QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           Y   G   ++ ELF  M     +  +V P  +T+  L +    +G  DE + LF +M   
Sbjct: 512 YGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNE 571

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
             ++     +  ++    + G+   A G+   M S   +       S+L AC  +  + +
Sbjct: 572 HGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSG--FDKVGAWSSLLGACR-IYHNIE 628

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           + EI       + E+ L +   +   Y    NI                        Y  
Sbjct: 629 IGEI-------AAENLLQLQPDVASHYVLLSNI------------------------YSS 657

Query: 579 HGFWHAALDLFDQMKSFGLKPNRG 602
            G W  A++L  +MK+ G+K   G
Sbjct: 658 AGLWDKAMNLRRRMKAMGVKKEPG 681


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 282/919 (30%), Positives = 474/919 (51%), Gaps = 81/919 (8%)

Query: 28  HLDFLCGNGRLNEAITVL-----DSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF 82
           H   LC  G LN+A   L     D +++  +K ++   + LLQ C +  +I + RK+H F
Sbjct: 60  HFHNLCNTGNLNQAFNFLQSNLNDVVSSSNSKPKQLIGL-LLQLCGEYKNIEIGRKIHNF 118

Query: 83  LNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWRE 140
           ++       DV + T+L+++Y+ C    D+  VF   R +NL+ W+A++  Y R+  +R+
Sbjct: 119 ISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRD 178

Query: 141 VVELFFLMVQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
            V +F  M+    F PD+F  P +++AC    D   G+ +H   +K  +     V N+++
Sbjct: 179 AVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALI 238

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC--------- 250
           A+Y K G +  A + F+ M +++ V+WNS++    + G  +E++ LF  +          
Sbjct: 239 AMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPD 298

Query: 251 -------------REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI-------- 289
                        + E++LG+V F+ L       G+  V   ++      G         
Sbjct: 299 VATMVTVIPLCARQGEVRLGMV-FHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLF 357

Query: 290 ---TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALA 345
                +V +W  MI G++++     A +L ++M     V  N VT+ + +  C +     
Sbjct: 358 DTNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFL 417

Query: 346 MGMEIHSLAVKMGF-TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
              EIH  A++ GF   D LV N+ +  Y+KC  L  AE VF  ++ K V SWN++I G+
Sbjct: 418 KLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGH 477

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLISG----------------YIQNGNE-DE 447
            Q G+  KA +L++ M+ S + P++ T   L+S                  ++NG E DE
Sbjct: 478 VQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDE 537

Query: 448 -----AVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
                 V L+ + GK        ++  ++N   WN++I G+ Q     +AL +F +M SS
Sbjct: 538 FICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSS 597

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
             +P+ ++I+  L AC+ + A    KE+H   ++  L     V  SLID YAK G +  S
Sbjct: 598 KIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQS 657

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           + IFD +  K  +TWN LI GY +HG    A++LF  M++ G +P+  TF++++ A + A
Sbjct: 658 QNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHA 717

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G+V  G +    +   + I P +EHY+ ++D+ GR+G+L EA+E + ++P +PDS IW +
Sbjct: 718 GLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSS 777

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           LL++CR + ++D+      +L +L P       LI   YA  GK ++  K+R+  +E   
Sbjct: 778 LLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGL 837

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYS-DLLYSW--LQNVPENVTARSSHSGLC--IEE 789
           +   G  WIE+   V  F+ G  S   S  +  +W  L+     +  +   S +   +EE
Sbjct: 838 QKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEE 897

Query: 790 EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
           +EK +I   HSEKLA++F L+ +++   T+R+ KN+R+CV CH   K VS +   EI + 
Sbjct: 898 DEKIKILRNHSEKLAISFGLLNTAKGT-TLRVCKNLRICVDCHNAIKLVSKIDKREIIVR 956

Query: 850 DSKCLHHFKNGQCSCGDYW 868
           D+K  HHFKNG CSCGDYW
Sbjct: 957 DNKRFHHFKNGFCSCGDYW 975


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 243/726 (33%), Positives = 401/726 (55%), Gaps = 39/726 (5%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           +  +LQ C        GK +HS++    ++    +   ++++Y  CG L   RR F++M+
Sbjct: 102 YSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTME 161

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
           +K+   WN M+S Y +IG+  E+               +  F I++    +  + + A E
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKES---------------ICLFKIMVEKGIEGKRPESASE 206

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           +  ++       DV +W  MISG+  NG T + L+++K+M ++G+  +  TI S +  C 
Sbjct: 207 LFDKL----CDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCA 262

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           +   L++G  +HSLA+K  F   +   N+L++MYSKC +L+ A RVF+ + +++V SW S
Sbjct: 263 NSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           MIAGY + G    A  L  +M++  V  +V+    ++    ++G+ D   D+   +  N+
Sbjct: 323 MIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANN 382

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKM----------QSSCFYPNCVTILSVLPA 509
            ++ N    N+L+  Y + G  + A  VF  M                P+  T+  +LPA
Sbjct: 383 -MESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDSRTMACILPA 441

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           CA L A  + KEIHG +LR    S   V N+L+D Y K G +  +R +FD + SKD+++W
Sbjct: 442 CASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSW 501

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
             +I GY +HG+ + A+  F++M+  G++P+  +F+SI+ A S +G+++ G + F  +  
Sbjct: 502 TVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKN 561

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            + I P +EHY+ M+DL  R+G L +A EFIE +PI PD++IW ALL  CRI+ +I+LA 
Sbjct: 562 DFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAE 621

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR-KLERENTRRNSFGQCWIEVKNL 748
              ER+F+LEP +     L+  IYA   K E+  ++R K+ ++  R+N  G  WIE+K  
Sbjct: 622 KVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNP-GCSWIEIKGK 680

Query: 749 VYTFVTG-GWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEK 802
           V  FV+G   S  +S  + S L+ +      E    ++ ++ +  +E +KE     HSEK
Sbjct: 681 VNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEK 740

Query: 803 LALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQC 862
           LA+AF L+ +     T+R+ KN+R+C  CHE AK++S     EI L DS   HHFKNG C
Sbjct: 741 LAMAFGLL-ALPPRKTVRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKNGYC 799

Query: 863 SCGDYW 868
           SC  +W
Sbjct: 800 SCRGFW 805



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 235/491 (47%), Gaps = 67/491 (13%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEI 89
            C  G L  A+ ++     Q +++   TY ++LQ C  S S+   +K+H+ +  N V  +
Sbjct: 76  FCQLGNLENAMELV--CMCQKSELETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNNVA-V 132

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D  +  KL+S+YA CG L + R VF+ M ++N+Y W+ M+  Y++   ++E + LF +MV
Sbjct: 133 DEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMV 192

Query: 150 QDGL---FPDDF--LFPK------------------------------------------ 162
           + G+    P+    LF K                                          
Sbjct: 193 EKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLA 252

Query: 163 ----ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
               +L  C N G    GK +HSL IK          N++L +Y KCG L  A R FE M
Sbjct: 253 TIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRVFEKM 312

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
            E++ V+W SMI+GY + G +D A RL  +M +E +KL VV    ++ +  + G  D   
Sbjct: 313 GERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGK 372

Query: 279 EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM---------SFVG-VMPNG 328
           ++   +++  +  ++F    ++  + + G    A  +F  M         + +G + P+ 
Sbjct: 373 DVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPDS 432

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            T+   + AC  L AL  G EIH   ++ G++ D  V N+L+++Y KC  L  A  +FDM
Sbjct: 433 RTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDM 492

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           I  KD+ SW  MI+GY   GY  +A   F +M+++ + P+ +++  ++     +G  ++ 
Sbjct: 493 IPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG 552

Query: 449 VDLFQRMGKND 459
              F  M KND
Sbjct: 553 WRFFYIM-KND 562



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 208/483 (43%), Gaps = 90/483 (18%)

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           V  +N  I  + QLG  + AME+V                CM           Q  +L  
Sbjct: 66  VTDYNAKILHFCQLGNLENAMELV----------------CMC----------QKSELET 99

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
           +           T +S +  C   K+L  G ++HS+        D ++G  L+++Y+ C 
Sbjct: 100 K-----------TYSSVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCG 148

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           +L+   RVFD ++ K+VY WN M++ Y + G               D   ++  + +++ 
Sbjct: 149 DLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG---------------DFKESICLFKIMVE 193

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
             I+    + A +LF ++       R+  SWNS+I+GY   G     L ++++M      
Sbjct: 194 KGIEGKRPESASELFDKL-----CDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGID 248

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
            +  TI+SVL  CA     +  K +H   ++ + E  +   N+L+D Y+K G++  +  +
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKCGDLDGALRV 308

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           F+ M  +++++W S+I GY   G    A+ L  QM+  G+K +     SI+ A + +G +
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSL 368

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM-------------P 664
           D GK V   I +   +   +   +A++D+Y + G ++ A      M              
Sbjct: 369 DNGKDVHDYI-KANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGE 427

Query: 665 IEPDSSIWEALLTAC----------RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYA 714
           ++PDS     +L AC           IHG I         L +    D  +   ++ +Y 
Sbjct: 428 LKPDSRTMACILPACASLSALERGKEIHGYI---------LRNGYSSDRHVANALVDLYV 478

Query: 715 ICG 717
            CG
Sbjct: 479 KCG 481



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 166/360 (46%), Gaps = 27/360 (7%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           +GR + AI +L  +  +G K+      ++L AC  S S+   + +H ++     E ++FV
Sbjct: 330 DGRSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFV 389

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y KCG +D A  VF  M  +++ +W+ MIG                      L
Sbjct: 390 CNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGE---------------------L 428

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD      IL AC +    E GK +H  +++ G S  R V N+++ +YVKCG L  AR 
Sbjct: 429 KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ +  KD V+W  MISGY   G  +EA   F++M    I+   V+F  ++ + +  G 
Sbjct: 489 LFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548

Query: 274 CDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            +        M++   I P +  + CM+   ++ G  S+A +  + +    + P+     
Sbjct: 549 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLP---IAPDATIWG 605

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           + +  C     + +  ++     ++   ++      L N+Y++ E+ E  +R+ + I  K
Sbjct: 606 ALLCGCRIYHDIELAEKVAERVFELE-PENTGYYVLLANIYAEAEKWEEVKRMREKIGKK 664



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/287 (21%), Positives = 114/287 (39%), Gaps = 57/287 (19%)

Query: 461 VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
           + R    +N+ I  + QLG   NA+ +    Q S       T  SVL  CA   +    K
Sbjct: 62  IDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETK--TYSSVLQLCAGSKSLTDGK 119

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK---------------- 564
           ++H  +   ++     +   L+  YA  G++   R +FD M  K                
Sbjct: 120 KVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179

Query: 565 -----------------------------------DIITWNSLICGYVLHGFWHAALDLF 589
                                              D+I+WNS+I GYV +G     L+++
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIY 239

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC-SITECYQIIPMIEHYSAMIDLYG 648
            QM   G+  +  T +S+++  + +G + LGK V   +I   ++    I   + ++D+Y 
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFE--RRINFSNTLLDMYS 297

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
           + G L+ A+   E M  E +   W +++      G  D A+  ++++
Sbjct: 298 KCGDLDGALRVFEKMG-ERNVVSWTSMIAGYTRDGRSDGAIRLLQQM 343


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 257/829 (31%), Positives = 410/829 (49%), Gaps = 77/829 (9%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A+++F+    R+L   + ++  YSR  + +E + LF  + + GL PD +    +L  C  
Sbjct: 55  AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
             +   G+ +H   +K G+     V NS++ +Y K G +   RR F+ M ++D V+WNS+
Sbjct: 115 SFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSL 174

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           ++GY     ND+   LF  M  E  +    T + +I +    G   + M++   +  LG 
Sbjct: 175 LTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGF 234

Query: 290 -------------------------------TPDVFTWTCMISGFAQNGRTSQALDLFKE 318
                                            D  +W  MI+G   NG+  +A + F  
Sbjct: 235 ETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNN 294

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   G  P   T  S I +C  LK L +   +H   +K G + +  V  +L+   +KC+E
Sbjct: 295 MQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKE 354

Query: 379 LEAAERVFDMIKD-KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV--- 434
           ++ A  +F ++   + V SW +MI+GY Q G   +A  LF  M+   V PN  T++    
Sbjct: 355 IDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILT 414

Query: 435 ----------------------------LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                       L+  +++ GN  +AV +F+ +   D +     
Sbjct: 415 VQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVI----- 469

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS-NKVKEIHGC 525
           +W++++AGY Q G+   A  +F ++      PN  T  S++ AC    AS  + K+ H  
Sbjct: 470 AWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAY 529

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
            ++  L ++L V +SL+  YAK GNI  +  IF     +D+++WNS+I GY  HG    A
Sbjct: 530 AIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKA 589

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           L++F++M+   L+ +  TF+ +I A + AG+V  G+  F  +   + I P +EHYS MID
Sbjct: 590 LEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMID 649

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           LY R+G L +AM+ I  MP  P +++W  +L A R+H NI+L  LA E++  LEP     
Sbjct: 650 LYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAA 709

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
             L+  IYA  G   + + VRKL  +   +   G  WIEVKN  Y+F+ G  S   SD +
Sbjct: 710 YVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGDLSHPLSDHI 769

Query: 766 YSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGS-SQAPHTI 819
           YS L  +   +        +++    IE+E+KE I   HSE+LA+AF LI +  + P  +
Sbjct: 770 YSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERLAIAFGLIATLPEIP--L 827

Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +IVKN+R+C  CH   K VS++    I + DS   HHFK G CSCGDYW
Sbjct: 828 QIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSCGDYW 876



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 158/557 (28%), Positives = 267/557 (47%), Gaps = 79/557 (14%)

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V   L+ +Y K G + D R VF++M +R++ +W++++  YS ++   +V ELF LM  +G
Sbjct: 139 VGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEG 198

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             PD +    ++ A  N G    G  +H+LV+KLG    R V NS++++  K G L  AR
Sbjct: 199 YRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDAR 258

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS----- 267
             F++M+ KD V+WNSMI+G+   G++ EA   F+ M     K    TF  +I+S     
Sbjct: 259 VVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLK 318

Query: 268 --------------------YNQLGQCDVAMEMVKRMES-------LGITPDVFTWTCMI 300
                                N L    VA+   K ++        +     V +WT MI
Sbjct: 319 ELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMI 378

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           SG+ QNG T QA++LF  M   GV PN  T ++ ++    ++      EIH+  +K  + 
Sbjct: 379 SGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILT----VQHAVFISEIHAEVIKTNYE 434

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
               VG +L++ + K   +  A +VF++I+ KDV +W++M+AGY QAG   +A ++F ++
Sbjct: 435 KSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQL 494

Query: 421 QESDVPPNVITW------------------------------------NVLISGYIQNGN 444
               + PN  T+                                    + L++ Y + GN
Sbjct: 495 TREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGN 554

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            + A ++F+R  + D V     SWNS+I+GY Q GQ   AL VF +MQ      + +T +
Sbjct: 555 IESAHEIFKRQKERDLV-----SWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFI 609

Query: 505 SVLPACAYLVASNKVKEIHGCVLR-RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
            V+ ACA+     K +     ++    +  ++   + +ID Y+++G +  +  I +GM  
Sbjct: 610 GVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPF 669

Query: 564 KDIIT-WNSLICGYVLH 579
               T W  ++    +H
Sbjct: 670 PPAATVWRIVLAASRVH 686



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 192/442 (43%), Gaps = 79/442 (17%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFV 93
           NG+  EA    +++   GAK    T+ +++++C     + L R LH   L      +  V
Sbjct: 282 NGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNV 341

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
            T L+    KC  +DDA  +F  M   +++ +W+AMI  Y ++    + V LF LM ++G
Sbjct: 342 LTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREG 401

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P+ F +  IL         E    +H+ VIK        V  ++L  +VK G +  A 
Sbjct: 402 VKPNHFTYSTILTVQHAVFISE----IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAV 457

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------- 261
           + FE ++ KD +AW++M++GY Q GE +EA ++F ++ RE IK    TF           
Sbjct: 458 KVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPT 517

Query: 262 -------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                                    + L+  Y + G  + A E+ KR +      D+ +W
Sbjct: 518 ASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKE----RDLVSW 573

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             MISG+AQ+G+  +AL++F+EM    +  + +T    ISAC     +  G         
Sbjct: 574 NSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYF----- 628

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
                     N +IN +     +E                ++ MI  Y +AG  GKA ++
Sbjct: 629 ----------NIMINDHHINPTME---------------HYSCMIDLYSRAGMLGKAMDI 663

Query: 417 FIKMQESDVPPNVITWNVLISG 438
              M     PP    W ++++ 
Sbjct: 664 INGM---PFPPAATVWRIVLAA 682


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 252/758 (33%), Positives = 394/758 (51%), Gaps = 78/758 (10%)

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
           L+IK G+      +  +++++ K G L  A R F+ +++K    +++M+ GY +    D+
Sbjct: 99  LIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDD 158

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRS--------------------------------YN 269
           A   F +M  + ++  V  F  L++                                  N
Sbjct: 159 AVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVN 218

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
              +C +  E  K  + +    D+  W  +ISG+AQNG    AL+L   M   G  P+ +
Sbjct: 219 MYAKCRLVEEAYKMFDRMP-ERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSI 277

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           TI S + A  D+ +L +G  IH  +++ GF   V V  +L++MYSKC  +  A  +FD +
Sbjct: 278 TIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRM 337

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP----------------------- 426
             K V SWNSMI GY Q G  G A E+F KM +  V                        
Sbjct: 338 TGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGR 397

Query: 427 ------------PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
                        +V   N LIS Y +    D A ++F+ +       +   SWN++I G
Sbjct: 398 FVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQH-----KTLVSWNAMILG 452

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS 534
           Y Q G+ N A+  F KMQ     P+  T++SV+PA A L    + K IHG V+R  L+ +
Sbjct: 453 YAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKN 512

Query: 535 LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
           + V  +L+D YAK G +  +R +FD M  + + TWN++I GY  HG   AAL+LF++MK 
Sbjct: 513 VFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKK 572

Query: 595 FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLE 654
             +KPN  TFL ++ A S +G+V+ G + F S+ + Y + P ++HY AM+DL GR+ +L 
Sbjct: 573 EVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLN 632

Query: 655 EAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYA 714
           EA +FI+ MPIEP  S++ A+L ACRIH N++L   A  R+FDL+P D     L+  IYA
Sbjct: 633 EAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYA 692

Query: 715 ICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPE 774
                +   +VR    +   + + G   +E++N V+TF +G  S   +  +Y++L+ +  
Sbjct: 693 TASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSGTTSHPQAKKIYAFLETLGN 752

Query: 775 NVTARS----SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
            + A      ++S   +E+  KE++   HSEKLA+AF+L+ +S    TI + KN+R+C  
Sbjct: 753 RIKAAGYMPDTNSVHDVEDVVKEQLLNSHSEKLAIAFSLLNTSPGT-TIHLRKNLRVCGD 811

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   KY+S++   EI + D +  HHFK+G CSCGDYW
Sbjct: 812 CHNATKYISLVTKREIIVRDMRRFHHFKDGTCSCGDYW 849



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 249/521 (47%), Gaps = 45/521 (8%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV 86
           T L     N  L++A++    +   G +     +  LL+ C D+  +   +++H  L +V
Sbjct: 145 TMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQL-IV 203

Query: 87  TEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
                +VF  T ++++YAKC  +++A ++F+ M ER+L  W+ +I  Y+++   +  +EL
Sbjct: 204 NGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALEL 263

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
              M ++G  PD      IL A  + G    G+ +H   ++ G      V  +++ +Y K
Sbjct: 264 VLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSK 323

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT---- 260
           CG +  AR  F+ M  K  V+WNSMI GY Q G+   A  +F KM  E++++  VT    
Sbjct: 324 CGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGA 383

Query: 261 -------------------------------FNILIRSYNQLGQCDVAMEMVKRMESLGI 289
                                           N LI  Y++  + D+A E+ + ++    
Sbjct: 384 LHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQH--- 440

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
              + +W  MI G+AQNGR ++A+D F +M    + P+  T+ S I A  +L  L     
Sbjct: 441 -KTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKW 499

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           IH L ++     +V V  +L++MY+KC  +  A ++FDM+ ++ V +WN+MI GY   G 
Sbjct: 500 IHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGL 559

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
              A ELF KM++  + PN +T+  ++S    +G  +E    F  M K+  ++     + 
Sbjct: 560 GKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYG 619

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +++    +  + N A    +KM      P      ++L AC
Sbjct: 620 AMVDLLGRANRLNEAWDFIQKMP---IEPAISVFGAMLGAC 657



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 142/506 (28%), Positives = 230/506 (45%), Gaps = 75/506 (14%)

Query: 77  RKLHAFLNLVTEIDVF----VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY 132
           ++LH F+ L+ +  ++     +TKL+S++ K G L +A  VF+ + ++    +  M+  Y
Sbjct: 91  KELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGY 150

Query: 133 SRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR 192
           +R+    + V  F  M  DG+ P  + F  +L+ CG+  D   GK +H  +I  G +   
Sbjct: 151 ARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNV 210

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
                V+ +Y KC  +  A + F+ M E+D V WN++ISGY Q G    A  L  +M  E
Sbjct: 211 FAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEE 270

Query: 253 EIKLGVVTFNILIRSYNQLGQCDVA----------------------MEMVKRMESLGIT 290
             +   +T   ++ +   +G   +                       ++M  +  S+G  
Sbjct: 271 GKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTA 330

Query: 291 PDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
             +F         +W  MI G+ QNG    A+++F++M    V    VT+  A+ AC DL
Sbjct: 331 RLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADL 390

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
             +  G  +H L  ++    DV V NSLI+MYSKC+ ++ A  +F+ ++ K + SWN+MI
Sbjct: 391 GDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMI 450

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPP---------------------------------- 427
            GY Q G   +A + F KMQ  ++ P                                  
Sbjct: 451 LGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLD 510

Query: 428 -NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALG 486
            NV     L+  Y + G    A  LF  M      +R+  +WN++I GY   G    AL 
Sbjct: 511 KNVFVATALVDMYAKCGAVHTARKLFDMMD-----ERHVTTWNAMIDGYGTHGLGKAALE 565

Query: 487 VFRKMQSSCFYPNCVTILSVLPACAY 512
           +F KM+     PN VT L VL AC++
Sbjct: 566 LFEKMKKEVIKPNEVTFLCVLSACSH 591



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 140/538 (26%), Positives = 233/538 (43%), Gaps = 114/538 (21%)

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           CT +K L    +   L +K G   + L    L++++ K   L  A RVF  I+DK    +
Sbjct: 87  CTSMKELH---QFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELY 143

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI-----SGYIQNGNE------- 445
           ++M+ GY +      A   F +M+   V P V  +  L+     +  ++ G E       
Sbjct: 144 HTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIV 203

Query: 446 -----------------------DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
                                  +EA  +F RM + D V      WN++I+GY Q G   
Sbjct: 204 NGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLV-----CWNTIISGYAQNGFGK 258

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
            AL +  +MQ     P+ +TI+S+LPA A + +    + IHG  +R   ES + V  +L+
Sbjct: 259 TALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALV 318

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
           D Y+K G++  +R IFD M+ K +++WNS+I GYV +G   AA+++F +M    ++    
Sbjct: 319 DMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNV 378

Query: 603 TFLSIILA-------------HSLAGMVDLGK--KVFCSITECY----------QIIPMI 637
           T +  + A             H L   ++LG    V  S+   Y          +I   +
Sbjct: 379 TVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENL 438

Query: 638 EH-----YSAMIDLYGRSGKLEEAMEFIEDMP---IEPDSSIWEALLTACR--------- 680
           +H     ++AMI  Y ++G++ EA+++   M    I+PDS    +++ A           
Sbjct: 439 QHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAK 498

Query: 681 -IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKL--ERENTRRNS 737
            IHG      L I    D    +V +   ++ +YA CG    A K+  +  ER  T  N+
Sbjct: 499 WIHG------LVIRTCLD---KNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNA 549

Query: 738 FGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV--PENVT-----ARSSHSGLCIE 788
                     ++  + T G  ++  +L     + V  P  VT     +  SHSGL  E
Sbjct: 550 ----------MIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEE 597


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 265/832 (31%), Positives = 429/832 (51%), Gaps = 94/832 (11%)

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           W  ++ +  R    RE V  +  M+  G+ PD+F FP +L+A  +  D + GK +H+ V 
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 185 KLGMSCVR-RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
           K G       V N+++ +Y KCG      + F+ + E++ V+WNS+IS      + + A 
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 180

Query: 244 RLFDKMCREEIKLGVVTF-------------------------------------NILIR 266
             F  M  E+++    T                                      N L+ 
Sbjct: 181 EAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIINTLVA 240

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            Y ++G+   +  ++   E      D+ TW  ++S   QN +  +AL+  +EM   GV P
Sbjct: 241 MYGKMGKLASSKVLLGSFEG----RDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEP 296

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD-VLVGNSLINMYSKCEELEAAERV 385
           +G TI+S + AC+ L+ L  G E+H+ A+K G  D+   VG++L++MY  C+++ +  RV
Sbjct: 297 DGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRV 356

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES-DVPPNVITWNVLISGYIQNG- 443
           FD + D+ +  WN+MI GY Q  Y  +A  LFI+M+ES  +  N  T   ++   +++G 
Sbjct: 357 FDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGA 416

Query: 444 -NEDEAV--------------------DLFQRMGKNDKVKR--------NTASWNSLIAG 474
            ++ EA+                    D++ R+GK D  KR        +  +WN++I G
Sbjct: 417 FSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITG 476

Query: 475 YQQLGQKNNALGVFRKMQ-----------SSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           Y    +  +AL +  KMQ                PN +T++++LP+CA L A  K KEIH
Sbjct: 477 YVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIH 536

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
              ++ +L + + V ++L+D YAK G +  SR +FD +  +++ITWN ++  Y +HG   
Sbjct: 537 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQ 596

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            A+D+   M   G+KPN  TF+S+  A S +GMV+ G K+F ++ + Y + P  +HY+ +
Sbjct: 597 DAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACV 656

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPD-SSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           +DL GR+G+++EA + I  +P   D +  W +LL ACRIH N+++  +A + L  LEP  
Sbjct: 657 VDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNV 716

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYS 762
                L+  IY+  G    A +VR+  +    R   G  WIE  + V+ FV G  S   S
Sbjct: 717 ASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQS 776

Query: 763 DLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
           + L  +L+ +      E     +S     +EE+EKE +   HSEKLA+AF ++ +S  P 
Sbjct: 777 EKLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTS--PG 834

Query: 818 T-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           T IR+ KN+R+C  CH   K++S +   EI L D +  HHFKNG CSCGDYW
Sbjct: 835 TIIRVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 230/477 (48%), Gaps = 55/477 (11%)

Query: 59  TYINLLQACID---SNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           T +++  AC +      + + +++HA+     E++ F+   L+++Y K G L  ++ +  
Sbjct: 197 TLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFIINTLVAMYGKMGKLASSKVLLG 256

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
               R+L TW+ ++ +  +++++ E +E    MV +G+ PD F    +L AC +      
Sbjct: 257 SFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRT 316

Query: 176 GKLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
           GK +H+  +K G +     V ++++ +Y  C +++   R F+ M ++    WN+MI+GY 
Sbjct: 317 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYA 376

Query: 235 QIGENDEAHRLFDKM--------------------------CREEIKLGVVTF------- 261
           Q   ++EA  LF +M                           ++E   G V         
Sbjct: 377 QNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDR 436

Query: 262 ---NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
              N L+  Y++LG+ D+A  +  +ME      D+ TW  +I+G+  + R   AL +  +
Sbjct: 437 FVQNALMDMYSRLGKIDIAKRIFGKMED----RDLVTWNTIITGYVFSERHEDALLMLHK 492

Query: 319 M-----------SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
           M           S V + PN +T+ + + +C  L ALA G EIH+ A+K     DV VG+
Sbjct: 493 MQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 552

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           +L++MY+KC  L+ + +VFD I  ++V +WN ++  Y   G    A ++   M    V P
Sbjct: 553 ALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKP 612

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
           N +T+  + +    +G  +E + +F  M K+  V+ ++  +  ++    + G+   A
Sbjct: 613 NEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEA 669



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 123/540 (22%), Positives = 237/540 (43%), Gaps = 64/540 (11%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-- 83
           +T L  LC N +  EA+  L  +  +G +    T  ++L AC     +   ++LHA+   
Sbjct: 267 NTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALK 326

Query: 84  NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
           N   + + FV + L+ +Y  C  +     VF+ M +R +  W+AMI  Y++++   E + 
Sbjct: 327 NGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALL 386

Query: 144 LFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
           LF  M +  GL  +      ++ AC   G F   + +H  V+K G+   R V+N+++ +Y
Sbjct: 387 LFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMY 446

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-----------CR 251
            + GK+  A+R F  M+++D V WN++I+GY     +++A  +  KM            R
Sbjct: 447 SRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASR 506

Query: 252 EEIKLGVVTFNILIRSYNQLG-----------------QCDVA-----MEMVKRMESLGI 289
             +K   +T   ++ S   L                    DVA     ++M  +   L +
Sbjct: 507 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 566

Query: 290 TPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
           +  VF         TW  ++  +  +G +  A+D+ + M   GV PN VT  S  +AC+ 
Sbjct: 567 SRKVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSH 626

Query: 341 LKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK---DKDVYS 396
              +  G++I +++    G          ++++  +   ++ A ++ ++I    DK   +
Sbjct: 627 SGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDK-AGA 685

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-YIQNGNEDEAVDLFQRM 455
           W+S++ G C+     +  E+  +     + PNV +  VL++  Y   G   +A ++ + M
Sbjct: 686 WSSLL-GACRIHNNLEIGEIAAQ-NLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNM 743

Query: 456 GKNDKVKRNTASW-------NSLIAGYQQLGQKNNALG----VFRKMQSSCFYPNCVTIL 504
                 K    SW       +  +AG     Q     G    ++ +M+   + P+   +L
Sbjct: 744 KAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLRGYLETLWERMRKEGYIPDTSCVL 803


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 266/803 (33%), Positives = 415/803 (51%), Gaps = 90/803 (11%)

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           LM Q    PD   +  +L++C    +F+ GKL+H  +++ G+     V N+++++Y KCG
Sbjct: 16  LMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCG 75

Query: 207 KLIWARRFFESM-DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
               AR  FE M +++D V+W++M+S +       +A   F  M           F  +I
Sbjct: 76  DTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVI 135

Query: 266 RS-----YNQLGQ-------------------CDVAMEMVKRMESLGITPDVF------- 294
           R+     Y  +G+                   C++    VK    LG    VF       
Sbjct: 136 RACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERN 195

Query: 295 --TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
             TWT MI+ FAQ G    A+DLF +M   G +P+  T +S +SACT+L  LA+G ++HS
Sbjct: 196 LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHS 255

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCE---ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
             +++G   DV VG SL++MY+KC     ++ + +VF+ + + +V SW ++I  Y Q+G 
Sbjct: 256 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGE 315

Query: 410 CGK-AYELFIKMQESDVPPNVITW-----------------------------------N 433
           C K A ELF KM    + PN  ++                                   N
Sbjct: 316 CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGN 375

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
            LIS Y ++G  ++A   F  +      ++N  S+N+++ GY +  +   A  +F ++  
Sbjct: 376 SLISMYARSGRMEDARKAFDIL-----FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIAD 430

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
           +    +  T  S+L   A + A  K ++IHG +L+   +S+  + N+LI  Y++ GNI  
Sbjct: 431 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEA 490

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           +  +F+ M  +++I+W S+I G+  HGF   AL++F +M   G KPN  T+++++ A S 
Sbjct: 491 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 550

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
            GM+  G+K F S+ + + I+P +EHY+ M+DL GRSG L EAMEFI  MP+  D+ +W 
Sbjct: 551 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 610

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
            LL ACR+HGN +L   A E + + EP D     L+  ++A  G+ +D +K+RK  +E  
Sbjct: 611 TLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERN 670

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--------TARSSHSGL 785
                G  WIEV+N V+ F  G  S   +  +Y  L  +   +        T    H   
Sbjct: 671 LIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHD-- 728

Query: 786 CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCE 845
            IEEE+KE+    HSEK+A+AF LI +SQ+   IRI KN+R+C  CH   KY+SM    E
Sbjct: 729 -IEEEQKEQFLFQHSEKIAVAFGLISTSQSK-PIRIFKNLRVCGDCHTAIKYISMATGRE 786

Query: 846 IFLADSKCLHHFKNGQCSCGDYW 868
           I + DS   HH KNG CSC DYW
Sbjct: 787 IVVRDSNRFHHIKNGVCSCNDYW 809



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 159/621 (25%), Positives = 292/621 (47%), Gaps = 81/621 (13%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVK 94
           GRL+ A + LD +  Q A     TY  LL++CI   +  L + +H   +    E+D  V 
Sbjct: 5   GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 64

Query: 95  TKLLSVYAKCGCLDDAREVFEDM-RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
             L+S+Y+KCG  + AR +FE M  +R+L +WSAM+  ++ +    + +  F  M++ G 
Sbjct: 65  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 124

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRRVRNSVLAVYVK-CGKLIWA 211
           +P+++ F  +++AC N      G++++  V+K G +     V   ++ ++VK  G L  A
Sbjct: 125 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 184

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
            + F+ M E++ V W  MI+ + Q+G   +A  LF  M          T++ ++ +  +L
Sbjct: 185 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 244

Query: 272 GQCDVAMEMVKRMESLGITPD----------------------------------VFTWT 297
           G   +  ++  R+  LG+  D                                  V +WT
Sbjct: 245 GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWT 304

Query: 298 CMISGFAQNGR-TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
            +I+ + Q+G    +A++LF +M    + PN  + +S + AC +L     G +++S AVK
Sbjct: 305 AIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVK 364

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
           +G      VGNSLI+MY++   +E A + FD++ +K++ S+N+++ GY +     +A+ L
Sbjct: 365 LGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLL 424

Query: 417 FIKMQESDVPPNVITW-----------------------------------NVLISGYIQ 441
           F ++ ++ +  +  T+                                   N LIS Y +
Sbjct: 425 FNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSR 484

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            GN + A  +F     N+   RN  SW S+I G+ + G    AL +F KM  +   PN +
Sbjct: 485 CGNIEAAFQVF-----NEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEI 539

Query: 502 TILSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           T ++VL AC+++ + S   K  +       +   +     ++D   +SG +V +    + 
Sbjct: 540 TYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINS 599

Query: 561 MS-SKDIITWNSLICGYVLHG 580
           M    D + W +L+    +HG
Sbjct: 600 MPLMADALVWRTLLGACRVHG 620



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 238/478 (49%), Gaps = 53/478 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           G   +AI +   +   G    R TY ++L AC +   + L ++LH+  + L   +DV V 
Sbjct: 210 GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVG 269

Query: 95  TKLLSVYAKC---GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRW-REVVELFFLMVQ 150
             L+ +YAKC   G +DD+R+VFE M E N+ +W+A+I AY +     +E +ELF  M+ 
Sbjct: 270 CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS 329

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
             + P+ F F  +L+ACGN  D   G+ ++S  +KLG++ V  V NS++++Y + G++  
Sbjct: 330 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMED 389

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------- 261
           AR+ F+ + EK+ V++N+++ GY +  +++EA  LF+++    I +   TF         
Sbjct: 390 ARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAAS 449

Query: 262 --------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                                     N LI  Y++ G  + A ++   ME      +V +
Sbjct: 450 IGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMED----RNVIS 505

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLA 354
           WT MI+GFA++G  ++AL++F +M   G  PN +T  + +SAC+ +  ++ G +  +S+ 
Sbjct: 506 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 565

Query: 355 VKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQA---GYC 410
            + G    +     ++++  +   L EA E +  M    D   W +++ G C+       
Sbjct: 566 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL-GACRVHGNTEL 624

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           G+     I  QE D P   I   +L + +   G   + V + + M + + +K    SW
Sbjct: 625 GRHAAEMILEQEPDDPAAYI---LLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSW 679


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 257/819 (31%), Positives = 410/819 (50%), Gaps = 82/819 (10%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+ +Y+K G +  AR VFE++  R+  +W AM+  Y+++    E + L+  M + G+ P 
Sbjct: 83  LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT 142

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            ++   +L +C     F  G+L+H+   K G      V N+V+ +Y++CG    A R F 
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            M  +D V +N++ISG+ Q G  + A  +F++M    +    VT + L+ +   LG    
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262

Query: 277 AMEMVKRMESLGITPD-------------------------------VFTWTCMISGFAQ 305
             ++   +   GI+ D                               V  W  M+  F Q
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
               +++ +LF +M   G+ PN  T    +  CT  + + +G +IHSL+VK GF  D+ V
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
              LI+MYSK   LE A RV +M+K+KDV SW SMIAGY Q   C  A   F +MQ+  +
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442

Query: 426 PPN-----------------------------------VITWNVLISGYIQNGNEDEAVD 450
            P+                                   V  WN L++ Y + G   EA  
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFS 502

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            F+ +   D++     +WN L++G+ Q G    AL VF +M  S    N  T +S L A 
Sbjct: 503 SFEEIEHKDEI-----TWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSAS 557

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
           A L    + K+IH  V++        V N+LI  Y K G+   ++  F  MS ++ ++WN
Sbjct: 558 ANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWN 617

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC 630
           ++I     HG    ALDLFDQMK  G+KPN  TF+ ++ A S  G+V+ G   F S+++ 
Sbjct: 618 TIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDE 677

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
           Y I P  +HY+ +ID++GR+G+L+ A +FIE+MPI  D+ +W  LL+AC++H NI++   
Sbjct: 678 YGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEF 737

Query: 691 AIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVY 750
           A + L +LEP D     L+   YA+  K  +  +VRK+ R+   R   G+ WIEVKN+V+
Sbjct: 738 AAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVH 797

Query: 751 TFVTGGWSESYSDLLYSWLQNVPENVTA-----RSSHSGLCIEEEEKEEISGIHSEKLAL 805
            F  G      ++ +Y++L  + + V          H     E+E ++    +HSEKLA+
Sbjct: 798 AFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAV 857

Query: 806 AFALIGSSQAP-HTIRIVKNIRMCVHCHETAKYVSMMHH 843
            F L+  S  P   +R++KN+R+  +   T+ Y + +H 
Sbjct: 858 TFGLM--SLPPCMPLRVIKNLRVEKY---TSLYANFLHQ 891



 Score =  241 bits (616), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 177/621 (28%), Positives = 298/621 (47%), Gaps = 78/621 (12%)

Query: 152 GLFPDDFLFPKILQAC-GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           GL P DF     L+AC GN   ++    +H+  +  G+   R V N ++ +Y K G ++ 
Sbjct: 38  GLGPLDFACA--LRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLP 95

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           ARR FE +  +D V+W +M+SGY Q G  +EA  L+ +M R  +       + ++ S  +
Sbjct: 96  ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK 155

Query: 271 L----------------GQC------DVAMEMVKRMESLGITPDVF---------TWTCM 299
                            G C      +  + +  R  S  +   VF         T+  +
Sbjct: 156 AELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTL 215

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           ISG AQ G    AL++F+EM F G+ P+ VTI+S ++AC  L  L  G ++HS   K G 
Sbjct: 216 ISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGI 275

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
           + D ++  SL+++Y KC ++E A  +F+     +V  WN M+  + Q     K++ELF +
Sbjct: 276 SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQ 335

Query: 420 MQESDVPPNVITWNVLI----------------SGYIQNGNEDEA------VDLFQRMGK 457
           MQ + + PN  T+  ++                S  ++ G E +       +D++ + G 
Sbjct: 336 MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGW 395

Query: 458 NDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
            +K +R        +  SW S+IAGY Q     +AL  F++MQ    +P+ + + S +  
Sbjct: 396 LEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISG 455

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           CA + A  +  +IH  +        + + N+L++ YA+ G I  + + F+ +  KD ITW
Sbjct: 456 CAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITW 515

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
           N L+ G+   G    AL +F +M   G+K N  TF+S + A +    +  GK++   + +
Sbjct: 516 NGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIK 575

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEA-MEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
                   E  +A+I LYG+ G  E+A MEF E    E +   W  ++T+C  HG     
Sbjct: 576 TGHSFE-TEVGNALISLYGKCGSFEDAKMEFSE--MSERNEVSWNTIITSCSQHGR---G 629

Query: 689 VLAIERLFD------LEPGDV 703
           + A++ LFD      ++P DV
Sbjct: 630 LEALD-LFDQMKKEGIKPNDV 649



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 166/625 (26%), Positives = 283/625 (45%), Gaps = 96/625 (15%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA---FLNLVTEIDV 91
           NG   EA+ +   +   G         ++L +C  +      R +HA        +EI  
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI-- 178

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV   ++++Y +CG    A  VF DM  R+  T++ +I  +++       +E+F  M   
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           GL PD      +L AC + GD + G  +HS + K G+S    +  S+L +YVKCG +  A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETA 298

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--------------------CR 251
              F S D  + V WN M+  + QI +  ++  LF +M                    C 
Sbjct: 299 LVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCT 358

Query: 252 EEIKLG---------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
            EI LG               +    +LI  Y++ G     +E  +R+  +    DV +W
Sbjct: 359 REIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGW----LEKARRVLEMLKEKDVVSW 414

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           T MI+G+ Q+     AL  FKEM   G+ P+ + + SAIS C  + A+  G++IH+    
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G++ DV + N+L+N+Y++C  +  A   F+ I+ KD  +WN +++G+ Q+G   +A ++
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKV 534

Query: 417 FIKMQESDVPPNVITW-----------------------------------NVLISGYIQ 441
           F++M +S V  NV T+                                   N LIS Y +
Sbjct: 535 FMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGK 594

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G+ ++A   F  M      +RN  SWN++I    Q G+   AL +F +M+     PN V
Sbjct: 595 CGSFEDAKMEFSEMS-----ERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDV 649

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS------LIDTYAKSGNIVYSR 555
           T + VL AC+++     V+E  G    +S+     +         +ID + ++G +  ++
Sbjct: 650 TFIGVLAACSHV---GLVEE--GLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAK 704

Query: 556 TIFDGMS-SKDIITWNSLICGYVLH 579
              + M  + D + W +L+    +H
Sbjct: 705 KFIEEMPIAADAMVWRTLLSACKVH 729



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 199/415 (47%), Gaps = 43/415 (10%)

Query: 300 ISGFAQNGRTSQALDLF--KEMSFVGVMPNGVTITSAISACT-DLKALAMGMEIHSLAVK 356
           ++GF  +   ++ L LF  K     G+ P  +    A+ AC  + +   +  EIH+ AV 
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRWQVVPEIHAKAVT 70

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G     +VGN LI++YSK   +  A RVF+ +  +D  SW +M++GY Q G   +A  L
Sbjct: 71  RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130

Query: 417 FIKMQESDVPPNVITWNVLIS-----------------GYIQN-------GNEDEAVDLF 452
           + +M  + V P     + ++S                 GY          GN    + L+
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN--AVITLY 188

Query: 453 QRMGKN--------DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            R G          D   R+T ++N+LI+G+ Q G   +AL +F +MQ S   P+CVTI 
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           S+L ACA L    K  ++H  + +  + S   +  SL+D Y K G++  +  IF+     
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           +++ WN ++  +        + +LF QM++ G++PN+ T+  I+   +    +DLG+++ 
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368

Query: 625 C-SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
             S+   ++    +     +ID+Y + G LE+A   +E M  E D   W +++  
Sbjct: 369 SLSVKTGFESDMYVS--GVLIDMYSKYGWLEKARRVLE-MLKEKDVVSWTSMIAG 420



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 170/335 (50%), Gaps = 10/335 (2%)

Query: 64  LQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           +  C   N++    ++HA + +     DV +   L+++YA+CG + +A   FE++  ++ 
Sbjct: 453 ISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDE 512

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            TW+ ++  +++     E +++F  M Q G+  + F F   L A  N  + + GK +H+ 
Sbjct: 513 ITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHAR 572

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           VIK G S    V N+++++Y KCG    A+  F  M E++ V+WN++I+   Q G   EA
Sbjct: 573 VIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEA 632

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMIS 301
             LFD+M +E IK   VTF  ++ + + +G  +  +   K M +  GI P    + C+I 
Sbjct: 633 LDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVID 692

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG--MEIHSLAVKMGF 359
            F + G+  +A    +EM    +  + +   + +SAC   K + +G     H L ++   
Sbjct: 693 IFGRAGQLDRAKKFIEEMP---IAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHD 749

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           +   ++   L N Y+  E+    ++V  M++D+ V
Sbjct: 750 SASYVL---LSNAYAVTEKWANRDQVRKMMRDRGV 781



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 44/246 (17%)

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           V EIH   + R L     V N LID Y+K+G ++ +R +F+ +S++D ++W +++ GY  
Sbjct: 61  VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSII-------------LAHSLA----------- 614
           +G    AL L+ QM   G+ P      S++             L H+             
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180

Query: 615 -----------GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
                      G   L ++VFC +     +      ++ +I  + + G  E A+E  E+M
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVT-----FNTLISGHAQCGHGEHALEIFEEM 235

Query: 664 P---IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE-PGDVLIQRLILQIYAICGKP 719
               + PD     +LL AC   G++         LF      D +++  +L +Y  CG  
Sbjct: 236 QFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDV 295

Query: 720 EDALKV 725
           E AL +
Sbjct: 296 ETALVI 301


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 266/803 (33%), Positives = 415/803 (51%), Gaps = 90/803 (11%)

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           LM Q    PD   +  +L++C    +F+ GKL+H  +++ G+     V N+++++Y KCG
Sbjct: 34  LMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCG 93

Query: 207 KLIWARRFFESM-DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
               AR  FE M +++D V+W++M+S +       +A   F  M           F  +I
Sbjct: 94  DTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVI 153

Query: 266 RS-----YNQLGQ-------------------CDVAMEMVKRMESLGITPDVF------- 294
           R+     Y  +G+                   C++    VK    LG    VF       
Sbjct: 154 RACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERN 213

Query: 295 --TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
             TWT MI+ FAQ G    A+DLF +M   G +P+  T +S +SACT+L  LA+G ++HS
Sbjct: 214 LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHS 273

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCE---ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
             +++G   DV VG SL++MY+KC     ++ + +VF+ + + +V SW ++I  Y Q+G 
Sbjct: 274 RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGE 333

Query: 410 CGK-AYELFIKMQESDVPPNVITW-----------------------------------N 433
           C K A ELF KM    + PN  ++                                   N
Sbjct: 334 CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGN 393

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
            LIS Y ++G  ++A   F  +      ++N  S+N+++ GY +  +   A  +F ++  
Sbjct: 394 SLISMYARSGRMEDARKAFDIL-----FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIAD 448

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
           +    +  T  S+L   A + A  K ++IHG +L+   +S+  + N+LI  Y++ GNI  
Sbjct: 449 TGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEA 508

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           +  +F+ M  +++I+W S+I G+  HGF   AL++F +M   G KPN  T+++++ A S 
Sbjct: 509 AFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSH 568

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
            GM+  G+K F S+ + + I+P +EHY+ M+DL GRSG L EAMEFI  MP+  D+ +W 
Sbjct: 569 VGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWR 628

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
            LL ACR+HGN +L   A E + + EP D     L+  ++A  G+ +D +K+RK  +E  
Sbjct: 629 TLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERN 688

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--------TARSSHSGL 785
                G  WIEV+N V+ F  G  S   +  +Y  L  +   +        T    H   
Sbjct: 689 LIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHD-- 746

Query: 786 CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCE 845
            IEEE+KE+    HSEK+A+AF LI +SQ+   IRI KN+R+C  CH   KY+SM    E
Sbjct: 747 -IEEEQKEQFLFQHSEKIAVAFGLISTSQSK-PIRIFKNLRVCGDCHTAIKYISMATGRE 804

Query: 846 IFLADSKCLHHFKNGQCSCGDYW 868
           I + DS   HH KNG CSC DYW
Sbjct: 805 IVVRDSNRFHHIKNGVCSCNDYW 827



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 159/621 (25%), Positives = 292/621 (47%), Gaps = 81/621 (13%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVK 94
           GRL+ A + LD +  Q A     TY  LL++CI   +  L + +H   +    E+D  V 
Sbjct: 23  GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 82

Query: 95  TKLLSVYAKCGCLDDAREVFEDM-RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
             L+S+Y+KCG  + AR +FE M  +R+L +WSAM+  ++ +    + +  F  M++ G 
Sbjct: 83  NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGF 142

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRRVRNSVLAVYVK-CGKLIWA 211
           +P+++ F  +++AC N      G++++  V+K G +     V   ++ ++VK  G L  A
Sbjct: 143 YPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 202

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
            + F+ M E++ V W  MI+ + Q+G   +A  LF  M          T++ ++ +  +L
Sbjct: 203 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 262

Query: 272 GQCDVAMEMVKRMESLGITPD----------------------------------VFTWT 297
           G   +  ++  R+  LG+  D                                  V +WT
Sbjct: 263 GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWT 322

Query: 298 CMISGFAQNGR-TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
            +I+ + Q+G    +A++LF +M    + PN  + +S + AC +L     G +++S AVK
Sbjct: 323 AIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVK 382

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
           +G      VGNSLI+MY++   +E A + FD++ +K++ S+N+++ GY +     +A+ L
Sbjct: 383 LGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLL 442

Query: 417 FIKMQESDVPPNVITW-----------------------------------NVLISGYIQ 441
           F ++ ++ +  +  T+                                   N LIS Y +
Sbjct: 443 FNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSR 502

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            GN + A  +F     N+   RN  SW S+I G+ + G    AL +F KM  +   PN +
Sbjct: 503 CGNIEAAFQVF-----NEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEI 557

Query: 502 TILSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           T ++VL AC+++ + S   K  +       +   +     ++D   +SG +V +    + 
Sbjct: 558 TYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINS 617

Query: 561 MS-SKDIITWNSLICGYVLHG 580
           M    D + W +L+    +HG
Sbjct: 618 MPLMADALVWRTLLGACRVHG 638



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 238/478 (49%), Gaps = 53/478 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           G   +AI +   +   G    R TY ++L AC +   + L ++LH+  + L   +DV V 
Sbjct: 228 GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVG 287

Query: 95  TKLLSVYAKC---GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRW-REVVELFFLMVQ 150
             L+ +YAKC   G +DD+R+VFE M E N+ +W+A+I AY +     +E +ELF  M+ 
Sbjct: 288 CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMIS 347

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
             + P+ F F  +L+ACGN  D   G+ ++S  +KLG++ V  V NS++++Y + G++  
Sbjct: 348 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMED 407

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------- 261
           AR+ F+ + EK+ V++N+++ GY +  +++EA  LF+++    I +   TF         
Sbjct: 408 ARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAAS 467

Query: 262 --------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                                     N LI  Y++ G  + A ++   ME      +V +
Sbjct: 468 IGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMED----RNVIS 523

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLA 354
           WT MI+GFA++G  ++AL++F +M   G  PN +T  + +SAC+ +  ++ G +  +S+ 
Sbjct: 524 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 583

Query: 355 VKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQA---GYC 410
            + G    +     ++++  +   L EA E +  M    D   W +++ G C+       
Sbjct: 584 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL-GACRVHGNTEL 642

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           G+     I  QE D P   I   +L + +   G   + V + + M + + +K    SW
Sbjct: 643 GRHAAEMILEQEPDDPAAYI---LLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSW 697


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 245/785 (31%), Positives = 415/785 (52%), Gaps = 79/785 (10%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D ++  KL++ Y+   C +DA  V + + +  +Y++S++I A ++ + + + + +F  M 
Sbjct: 49  DGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMF 108

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             GL PD  + P + + C     F+ GK +H +    G+     V+ S+  +Y++CG++ 
Sbjct: 109 SHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRM- 167

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
                                          +A ++FD+M  ++    VVT + L+ +Y 
Sbjct: 168 ------------------------------GDARKVFDRMSDKD----VVTCSALLCAYA 193

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           + G  +  + ++  MES GI  ++ +W  ++SGF ++G   +A+ +F+++  +G  P+ V
Sbjct: 194 RKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV 253

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           T++S + +  D + L MG  IH   +K G   D  V +++I+MY K   +     +F+  
Sbjct: 254 TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN-- 311

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
                  +  M AG C                           N  I+G  +NG  D+A+
Sbjct: 312 ------QFEMMEAGVC---------------------------NAYITGLSRNGLVDKAL 338

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           ++F+ + K   ++ N  SW S+IAG  Q G+   AL +FR+MQ +   PN VTI S+LPA
Sbjct: 339 EMFE-LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           C  + A    +  HG  +R  L  ++ V ++LID YAK G I  S+ +F+ M +K+++ W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
           NSL+ G+ +HG     + +F+ +    LKP+  +F S++ A    G+ D G K F  ++E
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE 517

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            Y I P +EHYS M++L GR+GKL+EA + I++MP EPDS +W ALL +CR+  N+DLA 
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAE 577

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR-KLERENTRRNSFGQCWIEVKNL 748
           +A E+LF LEP +     L+  IYA  G   +   +R K+E    ++N  G  WI+VKN 
Sbjct: 578 IAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNP-GCSWIQVKNR 636

Query: 749 VYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGL-----CIEEEEKEEISGIHSEKL 803
           VYT + G  S    D +   +  + + +        L      +EE+E+E++   HSEKL
Sbjct: 637 VYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKL 696

Query: 804 ALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCS 863
           A+ F L+ +      ++++KN+R+C  CH   K++S     EIF+ D+   HHFK+G CS
Sbjct: 697 AVVFGLLNTPDGT-PLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICS 755

Query: 864 CGDYW 868
           CGD+W
Sbjct: 756 CGDFW 760



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 151/572 (26%), Positives = 269/572 (47%), Gaps = 48/572 (8%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT--EIDVFVKT 95
             ++I V   + + G     +   NL + C + ++  + +++H  ++ V+  ++D FV+ 
Sbjct: 97  FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHC-VSCVSGLDMDAFVQG 155

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            +  +Y +CG + DAR+VF+ M ++++ T SA++ AY+R     EVV +   M   G+  
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL-----AVYVKCGKLIW 210
           +   +  IL      G  +   +M   +  LG    +   +SVL     +  +  G+LI 
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
                + +  KD    ++MI  Y + G       LF++   E ++ GV   N  I   ++
Sbjct: 276 GYVIKQGL-LKDKCVISAMIDMYGKSGHVYGIISLFNQF--EMMEAGVC--NAYITGLSR 330

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G  D A+EM +  +   +  +V +WT +I+G AQNG+  +AL+LF+EM   GV PN VT
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
           I S + AC ++ AL  G   H  AV++   D+V VG++LI+MY+KC  +  ++ VF+M+ 
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
            K++  WNS++ G+   G   +   +F  +  + + P+ I++  L+S   Q G  DE   
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            F+ M +   +K     ++ ++    + G+   A  + ++M    F P+     ++L +C
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP---FEPDSCVWGALLNSC 567

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
             L  +  + EI    L   LE   P       TY    NI                   
Sbjct: 568 R-LQNNVDLAEIAAEKLFH-LEPENP------GTYVLLSNI------------------- 600

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
                Y   G W     + ++M+S GLK N G
Sbjct: 601 -----YAAKGMWTEVDSIRNKMESLGLKKNPG 627



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 136/308 (44%), Gaps = 16/308 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFV 93
           NG+  EA+ +   +   G K    T  ++L AC +  ++   R  H F   V  +D V V
Sbjct: 366 NGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHV 425

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAKCG ++ ++ VF  M  +NL  W++++  +S   + +EV+ +F  +++  L
Sbjct: 426 GSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRL 485

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  +L ACG  G  + G K    +  + G+       + ++ +  + GKL  A 
Sbjct: 486 KPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAY 545

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
              + M  E D   W ++++        D A    +K+   E +    T+ +L   Y   
Sbjct: 546 DLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPE-NPGTYVLLSNIYAAK 604

Query: 272 GQCDVAMEMVKRMESLGITPD-----------VFTWTCMISGFAQNGRTSQALD-LFKEM 319
           G       +  +MESLG+  +           V+T         Q  + ++ +D + KEM
Sbjct: 605 GMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEM 664

Query: 320 SFVGVMPN 327
              G  PN
Sbjct: 665 RKSGHRPN 672


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 283/952 (29%), Positives = 452/952 (47%), Gaps = 131/952 (13%)

Query: 36   GRLNEAITVLDSIATQGAKVRRNTYI-----------------NLLQAC---IDSNSIHL 75
            G L EA TV D +  Q A VR  T +                   +Q C    D++++  
Sbjct: 150  GDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSC 209

Query: 76   ARKLHAFLNLVTEIDVF--------------VKTKLLSVYAKCGCLDDAREVFEDMRERN 121
              K  + L  +TE +V               V   L++VY++CG ++DA  VF+ M  R+
Sbjct: 210  VLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRD 269

Query: 122  LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
              +W++MIG    +      V+LF  M   G          +L AC   G    GK +H 
Sbjct: 270  AISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHG 329

Query: 182  LVIKLGM-----SCVRRVRNSVLA-----VYVKCGKLIWARRFFESMDEKDGV-AWNSMI 230
              +K G+     S    + ++ L      +YVKCG +  ARR F++M  K  V  WN ++
Sbjct: 330  YSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIM 389

Query: 231  SGYFQIGENDEAHRLFDKM-----------------------CREE--------IKLGV- 258
             GY ++GE +E+  LF +M                       C  +        +KLG  
Sbjct: 390  GGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFG 449

Query: 259  ---VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
                  N LI  Y +      A+ +  RM       D  +W  +ISG + NG  S+A++L
Sbjct: 450  AQCAVCNALISFYAKSNMIGDAVLVFNRMP----RQDTISWNSVISGCSSNGLNSEAIEL 505

Query: 316  FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
            F  M   G   + VT+ S + AC   +    G  +H  +VK G   +  + N+L++MYS 
Sbjct: 506  FIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSN 565

Query: 376  CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT---- 431
            C + ++  ++F  +  K+V SW +MI  Y +AG   K   L  +M    + P+V      
Sbjct: 566  CSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSA 625

Query: 432  -------------------------------WNVLISGYIQNGNEDEAVDLFQRMGKNDK 460
                                            N L+  Y++  N +EA  +F R+   D 
Sbjct: 626  LHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDV 685

Query: 461  VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
            +     SWN+LI GY +    N +  +F  M    F PN VT+  +LPA A + +  + +
Sbjct: 686  I-----SWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGR 739

Query: 521  EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
            EIH   LRR         N+L+D Y K G ++ +R +FD ++ K++I+W  +I GY +HG
Sbjct: 740  EIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHG 799

Query: 581  FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
            F   A+ LF+QM+  G++P+  +F +I+ A   +G+   G++ F ++ + Y+I P ++HY
Sbjct: 800  FGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHY 859

Query: 641  SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
            + ++DL  R+G L+EA+EFIE MPIEPDSSIW +LL  CRIH N+ LA    +++F LEP
Sbjct: 860  TCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEP 919

Query: 701  GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
             +     L+  IYA   + E   K++        R + G  WIEV++ V+ F+    +  
Sbjct: 920  ENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADNRNHP 979

Query: 761  YSDLLYSWLQNVP-----ENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQA 815
              + +  +L +V      E    +  ++ +  ++   +E    HS KLA+AF ++   + 
Sbjct: 980  DWNRIAEFLDDVARRMRQEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLPEG 1039

Query: 816  PHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
               IR+ KN ++C HCHE AK++S M + EI L DS   H F+ G+CSC  Y
Sbjct: 1040 -RPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHRFEGGRCSCRGY 1090



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 158/650 (24%), Positives = 293/650 (45%), Gaps = 85/650 (13%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF---------LNL 85
           NG    A+ +   + +QG ++   T +++L AC       + + +H +         L+ 
Sbjct: 283 NGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDS 342

Query: 86  VTE--IDVFVKTKLLSVYAKCGCLDDAREVFEDMRER-NLYTWSAMIGAYSRDQRWREVV 142
           V     D  + +KL+ +Y KCG +  AR VF+ M  + N++ W+ ++G Y++   + E +
Sbjct: 343 VQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESL 402

Query: 143 ELFFLMVQDGLFPDDFLFPKILQ--ACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
            LF  M + G+ PD+     +L+   C +C     G + H  ++KLG      V N++++
Sbjct: 403 SLFVQMHELGIAPDEHAISCLLKCITCLSCA--RDGLVAHGYIVKLGFGAQCAVCNALIS 460

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
            Y K   +  A   F  M  +D ++WNS+ISG    G N EA  LF +M  +  +L  VT
Sbjct: 461 FYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVT 520

Query: 261 FNILIRSYNQ-------------------LGQCDVAMEMV-------------KRMESLG 288
              ++ +  Q                   +G+  +A  ++             +   S+G
Sbjct: 521 LLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMG 580

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
              +V +WT MI+ + + G   +   L +EM   G+ P+   +TSA+ A    ++L  G 
Sbjct: 581 -QKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGK 639

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
            +H   ++ G    + V N+L+ MY KC  +E A  +FD + +KDV SWN++I GY +  
Sbjct: 640 SVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNN 699

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLIS---------------------GYIQNGNEDE 447
           +  +++ LF  M      PN +T   ++                      G++++     
Sbjct: 700 FPNESFSLFSDMLL-QFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASN 758

Query: 448 A-VDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
           A VD++ + G         +   K+N  SW  +IAGY   G   +A+ +F +M+ S   P
Sbjct: 759 ALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEP 818

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           +  +  ++L AC +   + + +     + +   +E  L     ++D  +++G++  +   
Sbjct: 819 DAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEF 878

Query: 558 FDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFL 605
            + M    D   W SL+ G  +H     A  + D  K F L+P N G ++
Sbjct: 879 IESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVAD--KVFKLEPENTGYYV 926



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 185/445 (41%), Gaps = 91/445 (20%)

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITS---AISACTDLKALAMGMEIHSL-----AVKMGF 359
           R  QA DL   +  +G    GV + S    +  C + ++L      H+L     A   G 
Sbjct: 75  RLCQAGDLAGALRLLG-SDGGVDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGG 133

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDK--DVYSWNSMIAGYCQAGYCGKAYELF 417
              VL G  L+  Y KC +L  A  VFD +  +  DV  W S+++ Y +AG   +A  LF
Sbjct: 134 KGSVL-GKRLVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLF 192

Query: 418 IKMQESDVPPNV-----------------------------------ITWNVLISGYIQN 442
            +MQ   V P+                                       N LI+ Y + 
Sbjct: 193 RQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRC 252

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G  ++A  +F  M   D +     SWNS+I G    G    A+ +F KM S     + VT
Sbjct: 253 GRMEDAARVFDSMHPRDAI-----SWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVT 307

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID----------TYAKSGNIV 552
           +LSVLPACA L      K +HG  ++  L   L  + S ID           Y K G++ 
Sbjct: 308 VLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMA 367

Query: 553 YSRTIFDGMSSK-DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI---- 607
            +R +FD MSSK ++  WN ++ GY   G +  +L LF QM   G+ P+      +    
Sbjct: 368 SARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCI 427

Query: 608 ---------ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
                    ++AH    +V LG    C++             +A+I  Y +S  + +A+ 
Sbjct: 428 TCLSCARDGLVAHGY--IVKLGFGAQCAVC------------NALISFYAKSNMIGDAVL 473

Query: 659 FIEDMPIEPDSSIWEALLTACRIHG 683
               MP + D+  W ++++ C  +G
Sbjct: 474 VFNRMPRQ-DTISWNSVISGCSSNG 497


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 257/819 (31%), Positives = 410/819 (50%), Gaps = 82/819 (10%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+ +Y+K G +  AR VFE++  R+  +W AM+  Y+++    E + L+  M + G+ P 
Sbjct: 83  LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT 142

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            ++   +L +C     F  G+L+H+   K G      V N+V+ +Y++CG    A R F 
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            M  +D V +N++ISG+ Q G  + A  +F++M    +    VT + L+ +   LG    
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262

Query: 277 AMEMVKRMESLGITPD-------------------------------VFTWTCMISGFAQ 305
             ++   +   GI+ D                               V  W  M+  F Q
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
               +++ +LF +M   G+ PN  T    +  CT  + + +G +IHSL+VK GF  D+ V
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
              LI+MYSK   LE A RV +M+K+KDV SW SMIAGY Q   C  A   F +MQ+  +
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442

Query: 426 PPN-----------------------------------VITWNVLISGYIQNGNEDEAVD 450
            P+                                   V  WN L++ Y + G   EA  
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFS 502

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            F+ +   D++     +WN L++G+ Q G    AL VF +M  S    N  T +S L A 
Sbjct: 503 SFEEIEHKDEI-----TWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSAS 557

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
           A L    + K+IH  V++        V N+LI  Y K G+   ++  F  MS ++ ++WN
Sbjct: 558 ANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWN 617

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC 630
           ++I     HG    ALDLFDQMK  G+KPN  TF+ ++ A S  G+V+ G   F S+++ 
Sbjct: 618 TIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDE 677

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
           Y I P  +HY+ +ID++GR+G+L+ A +FIE+MPI  D+ +W  LL+AC++H NI++   
Sbjct: 678 YGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEF 737

Query: 691 AIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVY 750
           A + L +LEP D     L+   YA+  K  +  +VRK+ R+   R   G+ WIEVKN+V+
Sbjct: 738 AAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVH 797

Query: 751 TFVTGGWSESYSDLLYSWLQNVPENVTA-----RSSHSGLCIEEEEKEEISGIHSEKLAL 805
            F  G      ++ +Y++L  + + V          H     E+E ++    +HSEKLA+
Sbjct: 798 AFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAV 857

Query: 806 AFALIGSSQAP-HTIRIVKNIRMCVHCHETAKYVSMMHH 843
            F L+  S  P   +R++KN+R+  +   T+ Y + +H 
Sbjct: 858 TFGLM--SLPPCMPLRVIKNLRVEKY---TSLYANFLHQ 891



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 177/621 (28%), Positives = 298/621 (47%), Gaps = 78/621 (12%)

Query: 152 GLFPDDFLFPKILQAC-GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           GL P DF     L+AC GN   ++    +H+  +  G+   R V N ++ +Y K G ++ 
Sbjct: 38  GLGPLDFACA--LRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLP 95

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           ARR FE +  +D V+W +M+SGY Q G  +EA  L+ +M R  +       + ++ S  +
Sbjct: 96  ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK 155

Query: 271 L----------------GQC------DVAMEMVKRMESLGITPDVF---------TWTCM 299
                            G C      +  + +  R  S  +   VF         T+  +
Sbjct: 156 AELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTL 215

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           ISG AQ G    AL++F+EM F G+ P+ VTI+S ++AC  L  L  G ++HS   K G 
Sbjct: 216 ISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGI 275

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
           + D ++  SL+++Y KC ++E A  +F+     +V  WN M+  + Q     K++ELF +
Sbjct: 276 SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQ 335

Query: 420 MQESDVPPNVITWNVLI----------------SGYIQNGNEDEA------VDLFQRMGK 457
           MQ + + PN  T+  ++                S  ++ G E +       +D++ + G 
Sbjct: 336 MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGW 395

Query: 458 NDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
            +K +R        +  SW S+IAGY Q     +AL  F++MQ    +P+ + + S +  
Sbjct: 396 LEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISG 455

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           CA + A  +  +IH  +        + + N+L++ YA+ G I  + + F+ +  KD ITW
Sbjct: 456 CAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITW 515

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
           N L+ G+   G    AL +F +M   G+K N  TF+S + A +    +  GK++   + +
Sbjct: 516 NGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIK 575

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEA-MEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
                   E  +A+I LYG+ G  E+A MEF E    E +   W  ++T+C  HG     
Sbjct: 576 TGHSFE-TEVGNALISLYGKCGSFEDAKMEFSE--MSERNEVSWNTIITSCSQHGR---G 629

Query: 689 VLAIERLFD------LEPGDV 703
           + A++ LFD      ++P DV
Sbjct: 630 LEALD-LFDQMKKEGIKPNDV 649



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 166/625 (26%), Positives = 283/625 (45%), Gaps = 96/625 (15%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA---FLNLVTEIDV 91
           NG   EA+ +   +   G         ++L +C  +      R +HA        +EI  
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI-- 178

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV   ++++Y +CG    A  VF DM  R+  T++ +I  +++       +E+F  M   
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           GL PD      +L AC + GD + G  +HS + K G+S    +  S+L +YVKCG +  A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETA 298

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--------------------CR 251
              F S D  + V WN M+  + QI +  ++  LF +M                    C 
Sbjct: 299 LVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCT 358

Query: 252 EEIKLG---------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
            EI LG               +    +LI  Y++ G     +E  +R+  +    DV +W
Sbjct: 359 REIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGW----LEKARRVLEMLKEKDVVSW 414

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           T MI+G+ Q+     AL  FKEM   G+ P+ + + SAIS C  + A+  G++IH+    
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G++ DV + N+L+N+Y++C  +  A   F+ I+ KD  +WN +++G+ Q+G   +A ++
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKV 534

Query: 417 FIKMQESDVPPNVITW-----------------------------------NVLISGYIQ 441
           F++M +S V  NV T+                                   N LIS Y +
Sbjct: 535 FMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGK 594

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G+ ++A   F  M      +RN  SWN++I    Q G+   AL +F +M+     PN V
Sbjct: 595 CGSFEDAKMEFSEMS-----ERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDV 649

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS------LIDTYAKSGNIVYSR 555
           T + VL AC+++     V+E  G    +S+     +         +ID + ++G +  ++
Sbjct: 650 TFIGVLAACSHV---GLVEE--GLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAK 704

Query: 556 TIFDGMS-SKDIITWNSLICGYVLH 579
              + M  + D + W +L+    +H
Sbjct: 705 KFIEEMPIAADAMVWRTLLSACKVH 729



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 199/415 (47%), Gaps = 43/415 (10%)

Query: 300 ISGFAQNGRTSQALDLF--KEMSFVGVMPNGVTITSAISACT-DLKALAMGMEIHSLAVK 356
           ++GF  +   ++ L LF  K     G+ P  +    A+ AC  + +   +  EIH+ AV 
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRWQVVPEIHAKAVT 70

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G     +VGN LI++YSK   +  A RVF+ +  +D  SW +M++GY Q G   +A  L
Sbjct: 71  RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130

Query: 417 FIKMQESDVPPNVITWNVLIS-----------------GYIQN-------GNEDEAVDLF 452
           + +M  + V P     + ++S                 GY          GN    + L+
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN--AVITLY 188

Query: 453 QRMGKN--------DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            R G          D   R+T ++N+LI+G+ Q G   +AL +F +MQ S   P+CVTI 
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           S+L ACA L    K  ++H  + +  + S   +  SL+D Y K G++  +  IF+     
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           +++ WN ++  +        + +LF QM++ G++PN+ T+  I+   +    +DLG+++ 
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368

Query: 625 C-SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
             S+   ++    +     +ID+Y + G LE+A   +E M  E D   W +++  
Sbjct: 369 SLSVKTGFESDMYVS--GVLIDMYSKYGWLEKARRVLE-MLKEKDVVSWTSMIAG 420



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 170/335 (50%), Gaps = 10/335 (2%)

Query: 64  LQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           +  C   N++    ++HA + +     DV +   L+++YA+CG + +A   FE++  ++ 
Sbjct: 453 ISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDE 512

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            TW+ ++  +++     E +++F  M Q G+  + F F   L A  N  + + GK +H+ 
Sbjct: 513 ITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHAR 572

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           VIK G S    V N+++++Y KCG    A+  F  M E++ V+WN++I+   Q G   EA
Sbjct: 573 VIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEA 632

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMIS 301
             LFD+M +E IK   VTF  ++ + + +G  +  +   K M +  GI P    + C+I 
Sbjct: 633 LDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVID 692

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG--MEIHSLAVKMGF 359
            F + G+  +A    +EM    +  + +   + +SAC   K + +G     H L ++   
Sbjct: 693 IFGRAGQLDRAKKFIEEMP---IAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHD 749

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           +   ++   L N Y+  E+    ++V  M++D+ V
Sbjct: 750 SASYVL---LSNAYAVTEKWANRDQVRKMMRDRGV 781



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 44/246 (17%)

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           V EIH   + R L     V N LID Y+K+G ++ +R +F+ +S++D ++W +++ GY  
Sbjct: 61  VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSII-------------LAHSLA----------- 614
           +G    AL L+ QM   G+ P      S++             L H+             
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180

Query: 615 -----------GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
                      G   L ++VFC +     +      ++ +I  + + G  E A+E  E+M
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVT-----FNTLISGHAQCGHGEHALEIFEEM 235

Query: 664 P---IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE-PGDVLIQRLILQIYAICGKP 719
               + PD     +LL AC   G++         LF      D +++  +L +Y  CG  
Sbjct: 236 QFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDV 295

Query: 720 EDALKV 725
           E AL +
Sbjct: 296 ETALVI 301


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 258/785 (32%), Positives = 408/785 (51%), Gaps = 85/785 (10%)

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           VF    +LS YAK G L++A  VFE+M E +  +W+AMI  Y++  ++   + +F  MV 
Sbjct: 79  VFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVS 138

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           D + P  F    +L +C        G+ +HS V+K G+S    V NS+L +Y K G  + 
Sbjct: 139 DDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVT 198

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A+  F+ M  K   +WN+M                                   I S+ Q
Sbjct: 199 AKIVFDRMKLKSTSSWNTM-----------------------------------ISSHMQ 223

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF-VGVMPNGV 329
            G  D+A    ++M    I  DV +W  MISG+ Q+G   +ALD+F +M       P+  
Sbjct: 224 SGLVDLAQVQFEQM----IERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKF 279

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           T+ SA+SAC +L+ L +G +IH+  ++  F     VGN+LI+MYSK   +E A+++ +  
Sbjct: 280 TLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIE-- 337

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
                    SMI+                         +VI +  L+ GY++ G+ + A 
Sbjct: 338 --------QSMISNL-----------------------DVIAFTALLDGYVKLGDINPAR 366

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
            +F  +   D V     +W ++I GY Q G   +A+ +FR M      PN  T+ ++L  
Sbjct: 367 RIFDSLRVRDVV-----AWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSV 421

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIIT 568
            + L + +  ++IH    R    SS+ V N+LI  YAKSG+I  +R +F+ +   +D IT
Sbjct: 422 SSSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTIT 481

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT 628
           W S+I     HG    AL LF++M   G+KP+  T++ ++ A +  G+V+ G+  +  + 
Sbjct: 482 WTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQ 541

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
             ++IIP   HY+ MIDL+GR+G L+EA  FIE+MPIEPD   W +LL +C++H N++LA
Sbjct: 542 NAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELA 601

Query: 689 VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL 748
            +A ERL  +EP +      +  +Y+ CG+ E+A  +RK  ++   +   G  W+++KN 
Sbjct: 602 EVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNK 661

Query: 749 VYTFVTGGWSESYSDLLYSWLQNVPENVT----ARSSHSGLC-IEEEEKEEISGIHSEKL 803
           V+ F          D +Y  +  + + +        + S L  +EEE KE+I   HSEKL
Sbjct: 662 VHIFGVDDGLHPQRDAIYEMMAKIWKEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKL 721

Query: 804 ALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCS 863
           A+AF LI + +   T+RI+KN+R+C  CH   K++S +   EI + D+   HHFKNG CS
Sbjct: 722 AIAFGLICTPENT-TLRIMKNLRVCNDCHSAIKFISKLVGREIIVRDATRFHHFKNGLCS 780

Query: 864 CGDYW 868
           C DYW
Sbjct: 781 CRDYW 785



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 156/545 (28%), Positives = 271/545 (49%), Gaps = 51/545 (9%)

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P D  +   LQ      D   GK +H+ +IK G+     + N+++  Y K G +  A R 
Sbjct: 12  PSD-PYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRV 70

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F+ M  K   +WN ++SGY + G  +EAHR+F++M   +     V++  +I  YNQ+GQ 
Sbjct: 71  FDEMPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPD----SVSWTAMIVGYNQMGQF 126

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
           + A+ M + M S  + P  F                                   T+T+ 
Sbjct: 127 ENAIGMFREMVSDDVPPTQF-----------------------------------TLTNV 151

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           +++C  ++ L +G ++HS  VK G +  + V NSL+NMY+K  +   A+ VFD +K K  
Sbjct: 152 LASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKST 211

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQR 454
            SWN+MI+ + Q+G    A   F +M E D    V++WN +ISGY Q+G + EA+D+F +
Sbjct: 212 SSWNTMISSHMQSGLVDLAQVQFEQMIERD----VVSWNAMISGYNQHGFDREALDIFSK 267

Query: 455 MGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV 514
           M  +   K +  +  S ++    L  +N  LG  +++ +        T  +V  A   + 
Sbjct: 268 MLMDSSSKPDKFTLASALSACANL--ENLKLG--KQIHAHIIRTEFDTFGAVGNALISMY 323

Query: 515 ASNKVKEIHGCVLRRSLESSLPVM--NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 572
           + +   EI   ++ +S+ S+L V+   +L+D Y K G+I  +R IFD +  +D++ W ++
Sbjct: 324 SKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAM 383

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQ 632
           I GYV +GF   A++LF  M   G KPN  T  +++   S    +D G+++  S T    
Sbjct: 384 IVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGN 443

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAI 692
               +   +A+I +Y +SG + +A      +  + D+  W +++ A   HG  + A+   
Sbjct: 444 -ASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLF 502

Query: 693 ERLFD 697
           ER+ +
Sbjct: 503 ERMLE 507



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 201/443 (45%), Gaps = 82/443 (18%)

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           TS +      K    G  IH+  +K G    V + N+L+N Y+K   +  A RVFD +  
Sbjct: 17  TSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPV 76

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
           K V+SWN +++GY + G   +A+ +F +M E    P+ ++W  +I GY Q G  + A+  
Sbjct: 77  KSVFSWNIILSGYAKGGRLEEAHRVFEEMPE----PDSVSWTAMIVGYNQMGQFENAI-- 130

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
                                             G+FR+M S    P   T+ +VL +CA
Sbjct: 131 ----------------------------------GMFREMVSDDVPPTQFTLTNVLASCA 156

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS--------- 562
            +      +++H  V++  L S + V NSL++ YAKSG+ V ++ +FD M          
Sbjct: 157 AVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNT 216

Query: 563 ----------------------SKDIITWNSLICGYVLHGFWHAALDLFDQM-KSFGLKP 599
                                  +D+++WN++I GY  HGF   ALD+F +M      KP
Sbjct: 217 MISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMDSSSKP 276

Query: 600 NRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           ++ T  S + A +    + LGK++   I    +     +   +A+I +Y +SG +E A +
Sbjct: 277 DKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVG--NALISMYSKSGGVEIAQK 334

Query: 659 FIEDMPIEP-DSSIWEALLTACRIHGNIDLAVLAIERLFD-LEPGDVLIQRLILQIYAIC 716
            IE   I   D   + ALL      G+I+ A     R+FD L   DV+    ++  Y   
Sbjct: 335 IIEQSMISNLDVIAFTALLDGYVKLGDINPA----RRIFDSLRVRDVVAWTAMIVGYVQN 390

Query: 717 GKPEDALKV-RKLERENTRRNSF 738
           G  +DA+++ R + +E  + N++
Sbjct: 391 GFNQDAMELFRSMIKEGPKPNNY 413



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 133/540 (24%), Positives = 221/540 (40%), Gaps = 115/540 (21%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF------------- 82
           G+   AI +   + +      + T  N+L +C     + + RK+H+F             
Sbjct: 124 GQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVA 183

Query: 83  ---LNL-------VTEIDVFVKTKL---------LSVYAKCGCLDDAREVFEDMRERNLY 123
              LN+       VT   VF + KL         +S + + G +D A+  FE M ER++ 
Sbjct: 184 NSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVV 243

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSL 182
           +W+AMI  Y++    RE +++F  M+ D    PD F     L AC N  + + GK +H+ 
Sbjct: 244 SWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAH 303

Query: 183 VIKLGMSCVRRVRNSVLAV---------------------------------YVKCGKLI 209
           +I+        V N+++++                                 YVK G + 
Sbjct: 304 IIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDIN 363

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------- 261
            ARR F+S+  +D VAW +MI GY Q G N +A  LF  M +E  K    T         
Sbjct: 364 PARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSS 423

Query: 262 ---------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                                      N LI  Y + G  + A  +   +       D  
Sbjct: 424 SLASLDHGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIH---WKRDTI 480

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           TWT MI   AQ+G   +AL LF+ M   G+ P+ +T    +SACT +  +  G   ++L 
Sbjct: 481 TWTSMIIALAQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNL- 539

Query: 355 VKMGFTDDVLVGNS----LINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
             M     ++   S    +I+++ +   L EA   + +M  + DV +W S++A  C+   
Sbjct: 540 --MQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLAS-CKVHK 596

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
             +  E+  +      P N   ++ L + Y   G  + A ++ + M K+  VK++   SW
Sbjct: 597 NVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSM-KDKGVKKDQGFSW 655


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 290/904 (32%), Positives = 440/904 (48%), Gaps = 88/904 (9%)

Query: 36   GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDVF 92
            G L EA+ +   +   G +    T+  +L+ C       + R++HA +       E+DV 
Sbjct: 176  GFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVL 235

Query: 93   VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
                L+++YAKCG +  AR+VF+ M   +  +W+AMI  +  +      +ELF  M+++ 
Sbjct: 236  --NALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENE 293

Query: 153  LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            + P+      +  A G   +    K MH   +K G +      NS++ +Y   G++  A 
Sbjct: 294  VQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAG 353

Query: 213  RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE------------------- 253
            + F  M+ KD ++W +MISGY + G  D+A  ++  M                       
Sbjct: 354  KIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLG 413

Query: 254  -----IKLG-----------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                 IKL            VV  N L+  Y +    D A+E+ K M       DV +W+
Sbjct: 414  RLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAE----KDVVSWS 469

Query: 298  CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
             MI+GF  N R+  AL  F+ M    V PN VT  +A+SAC    AL  G EIH+  ++ 
Sbjct: 470  SMIAGFCFNHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRC 528

Query: 358  GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            G   +  V N+L+++Y KC +   A   F +  +KDV SWN M++G+   G    A  LF
Sbjct: 529  GIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLF 588

Query: 418  IKM---------------------------------QESDVPPNVITWNVLISGYIQNGN 444
             +M                                 Q       V+  N L+  Y ++ +
Sbjct: 589  NQMMYTSLGRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKH 648

Query: 445  EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
             D+A+++F+ M + D V     SW+S+IAG+    +  +AL  FR M      PN VT +
Sbjct: 649  IDKAIEVFKFMAEKDVV-----SWSSMIAGFCFNHRSFDALYYFRYMLGHV-KPNSVTFI 702

Query: 505  SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
            + L ACA   A    KEIH  VLR  + S   V N+L+D Y K G   Y+   F   S K
Sbjct: 703  AALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEK 762

Query: 565  DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
            D+++WN ++ G+V HG    AL LF+QM   G  P+  TF+ ++ A S AGMV  G ++F
Sbjct: 763  DVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELF 821

Query: 625  CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
               TE + I+P ++HY+ M+DL  R GKL EA   I  MPI+PD+++W ALL  CRIH +
Sbjct: 822  HRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRH 881

Query: 685  IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIE 744
            ++L  LA + + +LEP DV    L+  +Y   GK     +VRK  RE       G  W+E
Sbjct: 882  VELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVE 941

Query: 745  VKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEE--KEEISGIHSEK 802
            VK + + F+T   S      +   L  + E + A        +E++E  +++I   HSE+
Sbjct: 942  VKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVESLEDKEVSEDDILCGHSER 1001

Query: 803  LALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQC 862
            LA+AF LI ++    TI + KN   C  CH   K +S +   EI + D+K LH FK+G C
Sbjct: 1002 LAVAFGLINTTPGT-TISVTKNRYTCQSCHVIFKAISEIVRREITVRDTKQLHCFKDGDC 1060

Query: 863  SCGD 866
            SCGD
Sbjct: 1061 SCGD 1064



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 202/757 (26%), Positives = 363/757 (47%), Gaps = 113/757 (14%)

Query: 25  RDTHLDFLCGNGRLNEAITVLDS---IATQGAKVR-------RNTYINLLQACIDSNSIH 74
           R   L  LC +G+L +A+ +L+S      +GA V        R      ++AC  +++ H
Sbjct: 67  RSAALRALCSHGQLAQALWLLESSPEPPDEGAYVALFRLCEWRRAVDAGMRACARADAEH 126

Query: 75  LARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
            +  L             +   +LS+  + G +  A  VF  M ER++++W+ M+G Y +
Sbjct: 127 PSFGLR------------LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGK 174

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
                E ++L++ M+  G+ PD + FP +L+ CG   D+  G+ +H+ V++ G      V
Sbjct: 175 VGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDV 234

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
            N+++ +Y KCG ++ AR+ F+ M   D ++WN+MI+G+F+  E +    LF  M   E+
Sbjct: 235 LNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEV 294

Query: 255 KLGVVTF-----------------------------------NILIRSYNQLGQCDVAME 279
           +  ++T                                    N LI+ Y  LG+   A +
Sbjct: 295 QPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGK 354

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           +  RME    T D  +WT MISG+ +NG   +AL+++  M    V P+ VTI SA++AC 
Sbjct: 355 IFSRME----TKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACA 410

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
            L  L +G+++H LA   GF   V+V N+L+ MY+K + ++ A  VF  + +KDV SW+S
Sbjct: 411 CLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSS 470

Query: 400 MIAGYCQAGYCGKAYE--LFIKMQESDVPPNVITWNVLIS-----GYIQNGNEDEA---- 448
           MIAG+C   +  ++++   + +     V PN +T+   +S     G +++G E  A    
Sbjct: 471 MIAGFC---FNHRSFDALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLR 527

Query: 449 -------------VDLFQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKNNALGV 487
                        +DL+ + G+            +++  SWN +++G+   G  + AL +
Sbjct: 528 CGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSL 587

Query: 488 FRKMQ-SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
           F +M  +S       + L+       L    K+ E+      +     + V N+L++ YA
Sbjct: 588 FNQMMYTSLGRMGACSALAACACLGRLDVGIKLHEL---AQNKGFIRYVVVANALLEMYA 644

Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
           KS +I  +  +F  M+ KD+++W+S+I G+  +     AL  F  M    +KPN  TF++
Sbjct: 645 KSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFIA 703

Query: 607 IILAHSLAGMVDLGKKVFCSITEC----YQIIPMIEHYSAMIDLYGRSGKLEEA-MEFIE 661
            + A +  G +  GK++   +  C       +P     +A++DLY + G+   A  +F  
Sbjct: 704 ALSACAATGALRSGKEIHAYVLRCGIGSEGYVP-----NALLDLYVKCGQTSYAWAQF-- 756

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
            +  E D   W  +L+    HG  D+A+    ++ ++
Sbjct: 757 SVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEM 793


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  417 bits (1072), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 246/769 (31%), Positives = 401/769 (52%), Gaps = 76/769 (9%)

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
           C   +  + +  L+ K G+      +  +++++ + G +  A R FE +D+K  V + +M
Sbjct: 47  CSSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTM 106

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           + G+ ++ + D+A + F +M  +E++  V  F  L++      +  V  E+   +   G 
Sbjct: 107 LKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF 166

Query: 290 TPDVF-------------------------------TWTCMISGFAQNGRTSQALDLFKE 318
           + D+F                               +W  +++G++QNG    AL++   
Sbjct: 167 SLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNL 226

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M    + P+ +TI S + A + L+ + +G EIH  A++ GF   V +  +L++MY+KC  
Sbjct: 227 MCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGS 286

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP----------- 427
           L+ A  +FD + +++V SWNSMI  Y Q     +A  +F KM +  V P           
Sbjct: 287 LKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHA 346

Query: 428 ------------------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
                                   NV   N LIS Y +    D A  +F ++       R
Sbjct: 347 CADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS-----R 401

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
              SWN++I G+ Q G+   AL  F +MQ+    P+  T +SV+ A A L  ++  K IH
Sbjct: 402 TIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIH 461

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
           G V+R  L+ ++ V  +L+D YAK G I+ +R IFD MS + + TWN++I GY  HG   
Sbjct: 462 GVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGK 521

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
           AAL+LF++M+   ++PN  TFLS+I A S +G+V+ G K F  + E Y I P ++HY AM
Sbjct: 522 AALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAM 581

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           +DL GR+G+L EA +FI  MP++P  +++ A+L AC+IH N++ A    ERLF+L P D 
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDG 641

Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
               L+  IY      E   +VR        R + G   +E+KN V++F +G  +   S 
Sbjct: 642 GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSSK 701

Query: 764 LLYSWLQ----NVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTI 819
            +Y++L+     + E      ++  L +E++ KE++   HSEKLA++F L+ ++ A  TI
Sbjct: 702 KIYAFLEKLICQIKEAGYVPDTNLILGLEDDVKEQLLSSHSEKLAISFGLLNTT-AGTTI 760

Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            + KN+R+C  CH   KY+S++   EI + D +  HHFKNG CSCGDYW
Sbjct: 761 HVRKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 222/461 (48%), Gaps = 40/461 (8%)

Query: 60  YINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           +  LL+ C D   + + +++H  L      +D+F  T L ++YAKC  + +AR+VF+ M 
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMP 197

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           ER+L +W+ ++  YS++   R  +E+  LM ++ L P       +L A         GK 
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKE 257

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H   ++ G   +  +  +++ +Y KCG L  AR  F+ M E++ V+WNSMI  Y Q   
Sbjct: 258 IHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNEN 317

Query: 239 NDEAHRLFDKMCREEIK---------------LG--------------------VVTFNI 263
             EA  +F KM  E +K               LG                    V   N 
Sbjct: 318 PKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNS 377

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           LI  Y +  + D A  M  +++S  I     +W  MI GFAQNGR  +AL+ F +M    
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTIV----SWNAMILGFAQNGRPIEALNYFSQMQART 433

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V P+  T  S I+A  +L        IH + ++     +V V  +L++MY+KC  +  A 
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIAR 493

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
            +FDM+ ++ V +WN+MI GY   G    A ELF +MQ+  + PN +T+  +IS    +G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSG 553

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
             +  +  F  M +N  ++ +   + +++    + G+ N A
Sbjct: 554 LVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEA 594



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 203/438 (46%), Gaps = 39/438 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG    A+ +++ +  +  K    T +++L A      I + +++H + +    +  V +
Sbjct: 214 NGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNI 273

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +YAKCG L  AR +F+ M ERN+ +W++MI AY +++  +E + +F  M+ +G+
Sbjct: 274 ATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGV 333

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P D      L AC + GD E G+ +H L ++L +     V NS++++Y KC ++  A  
Sbjct: 334 KPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAAS 393

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F  +  +  V+WN+MI G+ Q G   EA   F +M    +K    T+  +I +  +L  
Sbjct: 394 MFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSI 453

Query: 274 CDVA----------------------MEMVKRMESLGITPDVF---------TWTCMISG 302
              A                      ++M  +  ++ I   +F         TW  MI G
Sbjct: 454 THHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDG 513

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFTD 361
           +  +G    AL+LF+EM    + PNGVT  S ISAC+    +  G++  H +        
Sbjct: 514 YGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEP 573

Query: 362 DVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQ----AGYCGKAYEL 416
            +    +++++  +   L EA + +  M     V  + +M+ G CQ      +  K  E 
Sbjct: 574 SMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAML-GACQIHKNVNFAEKVAER 632

Query: 417 FIKMQESDVPPNVITWNV 434
             ++   D   +V+  N+
Sbjct: 633 LFELNPEDGGYHVLLANI 650



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 148/316 (46%), Gaps = 7/316 (2%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           ++ +D    N    EA+ +   +  +G K    + +  L AC D   +   R +H  L++
Sbjct: 306 NSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHK-LSV 364

Query: 86  VTEID--VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
             E+D  V V   L+S+Y KC  +D A  +F  ++ R + +W+AMI  ++++ R  E + 
Sbjct: 365 ELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALN 424

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
            F  M    + PD F +  ++ A          K +H +V++  +     V  +++ +Y 
Sbjct: 425 YFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYA 484

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           KCG ++ AR  F+ M E+    WN+MI GY   G    A  LF++M +  I+   VTF  
Sbjct: 485 KCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLS 544

Query: 264 LIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
           +I + +  G  +  ++    M E+  I P +  +  M+    + GR ++A D   +M   
Sbjct: 545 VISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMP-- 602

Query: 323 GVMPNGVTITSAISAC 338
            V P      + + AC
Sbjct: 603 -VKPAVNVYGAMLGAC 617


>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Brachypodium distachyon]
          Length = 851

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 260/860 (30%), Positives = 433/860 (50%), Gaps = 76/860 (8%)

Query: 43  TVLDSIATQGAKVRRNT--YINLLQACID---------SNSIHLARKLHAFLNLVT---- 87
           T L ++A       R+    ++LL+ C D          +S+  AR+L   L+ +     
Sbjct: 34  TPLSNVAADSPSSFRDARLLLSLLRQCGDMICLDEEDTGSSLRAARRLAPQLHSLAVRAG 93

Query: 88  --EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE----RNLYTWSAMIGAYSRDQRWREV 141
               +  V   L  + A+ G    +R + E+  E    ++   W+  +   +    W E 
Sbjct: 94  HATREPRVACALSDLLARLGRGPSSRRLLEEADESEGGKDAVLWNKQVAMLAEAGEWDEA 153

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
           +  F  M   G+  D +   ++L ACG       GK +H+  +K G+     +    LA 
Sbjct: 154 IGAFREMQARGVAADGYALARVLHACGRAAARREGKAVHAHALKAGLVDAHPLVPGFLAG 213

Query: 202 YVKCGKLIWARR--FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
               G  + A       +      VAW+++++                  C   ++LG+V
Sbjct: 214 MYAEGADVAAATAVLLRATPPPRSVAWDAVVA-----------------CC---VRLGLV 253

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
                          D AME+  RM   G  P + TW  ++SG A++GR  +AL + + M
Sbjct: 254 ---------------DDAMELAGRMARDGPEPTLATWNAVLSGCARHGRDREALAVLRRM 298

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
              G+ P+  T++S + +  +   +  GME+H   ++ G   D   G +L++MY+KC  L
Sbjct: 299 LEQGLWPDATTVSSLLKSVANAGMVRHGMEVHCFFLRHGLVPDAYTGTALVDMYAKCGRL 358

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
           + A RVFD ++ +++ +WNS++AG+  AG    A EL  +M+ + + PNV TWN LI+GY
Sbjct: 359 DCARRVFDTLEHRNLATWNSLVAGHAYAGQFEAALELVERMKRNRLDPNVTTWNGLITGY 418

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
             NG   +A+ L +++ K   +  N  SW SLI+G    G+  ++   F++MQ     P+
Sbjct: 419 SLNGLSSQAMLLLRQI-KAAGLTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQKDGVQPS 477

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
            VT+L +L ACA L    K KE+H   LRR+ +  + V  +LID Y+K+G++  ++ IF 
Sbjct: 478 LVTMLVLLRACAGLALLKKGKELHCFALRRAYDCDMVVGTALIDMYSKAGSLTSAKRIFG 537

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
            + +K+++  N+++ G  +HG  H A+ LF  +   GLKP+  TF +++ A    G++  
Sbjct: 538 RIQNKNLVCCNAMLTGLAVHGQSHEAITLFHDLWRSGLKPDSITFTALLTACRSMGLITE 597

Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
           G + F ++   Y ++P  E+Y+ M+DL  RSG L+EAM  IE  P++P +S+W ALLT C
Sbjct: 598 GWEYFDNMETKYGVVPTAENYACMVDLLARSGYLDEAMALIERSPVDPGASLWGALLTGC 657

Query: 680 RIHGNIDLAVLAIERLFDLEPGDVLIQRLIL------QIYAICGKPEDALKVRKLERENT 733
            IHGN+DLA +A   LF LEP +     +I+      Q+Y      + A+K R +   NT
Sbjct: 658 SIHGNLDLAEVAARNLFRLEPYNSANYLMIMSLYEHEQMYDEADSLKYAMKARGV---NT 714

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIE 788
           R    G  WI+++  ++ F   G     +  +   L ++   +        +S     + 
Sbjct: 715 RP---GWSWIQIEQGIHVFEVDGSPHPETAEICEELMSLVRQIKMTGYVPDTSCVVYNVP 771

Query: 789 EEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFL 848
           EEEKE++   H+EKLA+ + LI S  +   +R++KN RMC  CHE AK++S +   +I L
Sbjct: 772 EEEKEKLLLCHTEKLAITYGLIHSDASRMPVRVIKNTRMCSDCHEVAKHISALCGRQIIL 831

Query: 849 ADSKCLHHFKNGQCSCGDYW 868
            D+   HHF +G CSC DYW
Sbjct: 832 RDAVRFHHFVDGNCSCNDYW 851



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 101/448 (22%), Positives = 189/448 (42%), Gaps = 100/448 (22%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDV 91
           +GR  EA+ VL  +  QG      T  +LL++  ++  +    ++H F     LV   D 
Sbjct: 285 HGRDREALAVLRRMLEQGLWPDATTVSSLLKSVANAGMVRHGMEVHCFFLRHGLVP--DA 342

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           +  T L+ +YAKCG LD AR VF+ +  RNL TW++++  ++   ++   +EL   M ++
Sbjct: 343 YTGTALVDMYAKCGRLDCARRVFDTLEHRNLATWNSLVAGHAYAGQFEAALELVERMKRN 402

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            L P+   +  ++           G  ++ L  +  M  +R+++ + L   V        
Sbjct: 403 RLDPNVTTWNGLI----------TGYSLNGLSSQ-AMLLLRQIKAAGLTPNV-------- 443

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
                       V+W S+ISG    GE +++   F +M ++ ++  +VT  +L+R+   L
Sbjct: 444 ------------VSWTSLISGSCHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRACAGL 491

Query: 272 G-----------------QCDVA-----MEMVKRMESLGITPDVFTW---------TCMI 300
                              CD+      ++M  +  SL     +F             M+
Sbjct: 492 ALLKKGKELHCFALRRAYDCDMVVGTALIDMYSKAGSLTSAKRIFGRIQNKNLVCCNAML 551

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +G A +G++ +A+ LF ++   G+ P+ +T T+ ++AC  +  +  G E           
Sbjct: 552 TGLAVHGQSHEAITLFHDLWRSGLKPDSITFTALLTACRSMGLITEGWEYFD-------- 603

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
                     NM +K   +  AE            ++  M+    ++GY  +A  L   +
Sbjct: 604 ----------NMETKYGVVPTAE------------NYACMVDLLARSGYLDEAMAL---I 638

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEA 448
           + S V P    W  L++G   +GN D A
Sbjct: 639 ERSPVDPGASLWGALLTGCSIHGNLDLA 666



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 3/203 (1%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDV 91
           C NG   ++      +   G +    T + LL+AC     +   ++LH F L    + D+
Sbjct: 454 CHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRACAGLALLKKGKELHCFALRRAYDCDM 513

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            V T L+ +Y+K G L  A+ +F  ++ +NL   +AM+   +   +  E + LF  + + 
Sbjct: 514 VVGTALIDMYSKAGSLTSAKRIFGRIQNKNLVCCNAMLTGLAVHGQSHEAITLFHDLWRS 573

Query: 152 GLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           GL PD   F  +L AC + G    G +   ++  K G+         ++ +  + G L  
Sbjct: 574 GLKPDSITFTALLTACRSMGLITEGWEYFDNMETKYGVVPTAENYACMVDLLARSGYLDE 633

Query: 211 ARRFFESMDEKDGVA-WNSMISG 232
           A    E      G + W ++++G
Sbjct: 634 AMALIERSPVDPGASLWGALLTG 656


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 242/726 (33%), Positives = 397/726 (54%), Gaps = 39/726 (5%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           +  +LQ C        GK +HS++    +     +   +++ Y  CG L   RR F++M+
Sbjct: 102 YGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTME 161

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
           +K+   WN M+S Y +IG+  E+               +  F I++    +  + + A E
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKES---------------ICLFKIMVEKGIEGKRPESASE 206

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           +  ++       DV +W  MISG+  NG T + L ++K+M ++G+  +  TI S +  C 
Sbjct: 207 LFDKL----CDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCA 262

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           +   L++G  +HSLA+K  F   +   N+L++MYSKC +L+ A RVF+ + +++V SW S
Sbjct: 263 NSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           MIAGY + G+   A  L  +M++  V  +V+    ++    ++G+ D   D+   +  N+
Sbjct: 323 MIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKM----------QSSCFYPNCVTILSVLPA 509
            +  N    N+L+  Y + G    A  VF  M                P+  T+  +LPA
Sbjct: 383 -MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACILPA 441

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           CA L A  + KEIHG +LR    S   V N+L+D Y K G +  +R +FD + SKD+++W
Sbjct: 442 CASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSW 501

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
             +I GY +HG+ + A+  F++M+  G++P+  +F+SI+ A S +G+++ G + F  +  
Sbjct: 502 TVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKN 561

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            + I P +EHY+ M+DL  R+G L +A +FIE +PI PD++IW ALL  CRI+ +I+LA 
Sbjct: 562 DFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAE 621

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR-KLERENTRRNSFGQCWIEVKNL 748
              ER+F+LEP +     L+  IYA   K E+  ++R K+ ++  R+N  G  WIE+K  
Sbjct: 622 KVAERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNP-GCSWIEIKGR 680

Query: 749 VYTFVTG-GWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEK 802
           V  FV+G   S  +S  + S L+ +      E    ++ ++ +  +E +KE     HSEK
Sbjct: 681 VNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYALINADEMQKEMALCGHSEK 740

Query: 803 LALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQC 862
           LA+AF L+ +     TIR+ KN+R+C  CHE AK++S     EI L DS   HHFK+G C
Sbjct: 741 LAMAFGLL-TLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYC 799

Query: 863 SCGDYW 868
           SC  +W
Sbjct: 800 SCRGFW 805



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 232/490 (47%), Gaps = 65/490 (13%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EID 90
            C  G L  A+ ++     Q +++   TY ++LQ C    S+   +K+H+ +   +  +D
Sbjct: 76  FCQLGDLENAMELV--CMCQKSELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVD 133

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
             +  KL+S YA CG L + R VF+ M ++N+Y W+ M+  Y++   ++E + LF +MV+
Sbjct: 134 EALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVE 193

Query: 151 DGL---FPDDF--LFPK------------------------------------------- 162
            G+    P+    LF K                                           
Sbjct: 194 KGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLAT 253

Query: 163 ---ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
              +L  C N G    GK +HSL IK          N++L +Y KCG L  A R FE M 
Sbjct: 254 IISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 313

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
           E++ V+W SMI+GY + G +D A  L  +M +E +KL VV    ++ +  + G  D   +
Sbjct: 314 ERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKD 373

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM---------SFVG-VMPNGV 329
           +   +++  +  ++F    ++  +A+ G    A  +F  M         + VG + P+  
Sbjct: 374 VHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSR 433

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           T+   + AC  L AL  G EIH   ++ G++ D  V N+L+++Y KC  L  A  +FDMI
Sbjct: 434 TMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
             KD+ SW  MIAGY   GY  +A   F +M+++ + P+ +++  ++     +G  ++  
Sbjct: 494 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553

Query: 450 DLFQRMGKND 459
             F  M KND
Sbjct: 554 RFFYIM-KND 562



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 194/435 (44%), Gaps = 71/435 (16%)

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           V  +N  I  + QLG  + AME+V                CM           Q  +L  
Sbjct: 66  VTDYNAKILHFCQLGDLENAMELV----------------CM----------CQKSELET 99

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
           +           T  S +  C  LK+L  G ++HS+        D  +G  L++ Y+ C 
Sbjct: 100 K-----------TYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCG 148

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           +L+   RVFD ++ K+VY WN M++ Y + G               D   ++  + +++ 
Sbjct: 149 DLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG---------------DFKESICLFKIMVE 193

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
             I+    + A +LF ++       R+  SWNS+I+GY   G     LG++++M      
Sbjct: 194 KGIEGKRPESASELFDKL-----CDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID 248

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
            +  TI+SVL  CA     +  K +H   ++ S E  +   N+L+D Y+K G++  +  +
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRV 308

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           F+ M  +++++W S+I GY   G+   A+ L  QM+  G+K +     SI+ A + +G +
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSL 368

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM-------------P 664
           D GK V   I +   +   +   +A++D+Y + G +E A      M              
Sbjct: 369 DNGKDVHDYI-KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGE 427

Query: 665 IEPDSSIWEALLTAC 679
           ++PDS     +L AC
Sbjct: 428 LKPDSRTMACILPAC 442



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 169/362 (46%), Gaps = 31/362 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDV 91
           +G  + AI +L  +  +G K+      ++L AC  S S+   + +H ++   N+ +  ++
Sbjct: 330 DGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMAS--NL 387

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV   L+ +YAKCG ++ A  VF  M  +++ +W+ M+G                     
Sbjct: 388 FVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGE-------------------- 427

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            L PD      IL AC +    E GK +H  +++ G S  R V N+++ +YVKCG L  A
Sbjct: 428 -LKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLA 486

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R  F+ +  KD V+W  MI+GY   G  +EA   F++M    I+   V+F  ++ + +  
Sbjct: 487 RLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHS 546

Query: 272 GQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  +        M++   I P +  + CM+   ++ G  S+A   +K +  + + P+   
Sbjct: 547 GLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKA---YKFIETLPIAPDATI 603

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
             + +  C     + +  ++     ++   ++      L N+Y++ E+ E  +R+ + I 
Sbjct: 604 WGALLCGCRIYHDIELAEKVAERVFELE-PENTGYYVLLANIYAEAEKREEVKRMREKIG 662

Query: 391 DK 392
            K
Sbjct: 663 KK 664


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 254/814 (31%), Positives = 415/814 (50%), Gaps = 88/814 (10%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
           NL+     + S+  A   H F  +  +   F    L+S YAK G  + +R +  +M + +
Sbjct: 50  NLMTFYAKTGSLRFAH--HVFDEMPLK-STFSWNTLISGYAKQGNFEVSRRLLYEMPDCD 106

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
             +W+A+I  Y++   +   + +F  M+ + + P  F    +L +C      + G+ +HS
Sbjct: 107 PVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHS 166

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
            V+KLG+     V  S+L +Y KCG  + A+  F+ M  K+                   
Sbjct: 167 FVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN------------------- 207

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                           + T+N LI  Y Q GQ ++A    ++M       D+ +W  MIS
Sbjct: 208 ----------------ISTWNALISLYMQSGQFELAASQFEKMPDR----DIVSWNSMIS 247

Query: 302 GFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           G++Q G   +AL +F +M +   + P+  T+ S +SAC +L+ L +G +IH+  ++    
Sbjct: 248 GYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETE 307

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
               VGN+LI+MY+K   +E A  + +  +  ++                          
Sbjct: 308 TSGAVGNALISMYAKSGGVEIARLIVEHNRTSNL-------------------------- 341

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
                  N+I +  L+ GY + GN   A ++F ++   D V     +W ++I GY Q G 
Sbjct: 342 -------NIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVV-----AWTAMIVGYVQNGL 389

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
            N+AL +FR M +    PN  T+ ++L   + L      K+IH   ++    S+  V N+
Sbjct: 390 WNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNA 449

Query: 541 LIDTYAKSGNIVYSRTIFD-GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
           LI  YAK+GNI  ++ +FD     K+I++W S+I     HG    A++LF++M S G+KP
Sbjct: 450 LIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKP 509

Query: 600 NRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEF 659
           +  T++ ++ A +  G+V+ G+K +  +TE ++I P + HY+ MIDLYGR+G L+EA  F
Sbjct: 510 DHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLF 569

Query: 660 IEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKP 719
           IE MPIEPD+  W +LL +C+IH N DLA +A ERL  ++PG+      +  +Y+ CGK 
Sbjct: 570 IESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKW 629

Query: 720 EDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA- 778
           E+A + RKL ++   R   G  WI +KN V+ F          D +Y  +  + E +   
Sbjct: 630 ENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKM 689

Query: 779 ---RSSHSGLC-IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHET 834
                + S L  +EEE KE+I   HSEKLA+AF L+ + +    +RI+KN+R+C  CH  
Sbjct: 690 GFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENT-ALRIMKNLRVCNDCHSA 748

Query: 835 AKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            K++S +   EI + D+   HHFK+G CSC DYW
Sbjct: 749 IKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 157/575 (27%), Positives = 257/575 (44%), Gaps = 116/575 (20%)

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
            F  ILQ      D  AG+ +H  +IK G+     + N+++  Y K G L    RF    
Sbjct: 12  FFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSL----RF---- 63

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
                                  AH +FD+M  +       ++N LI  Y + G  +V+ 
Sbjct: 64  -----------------------AHHVFDEMPLK----STFSWNTLISGYAKQGNFEVSR 96

Query: 279 EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
            ++  M       D  +WT +I G+ Q G    A+ +F +M    V P+  T+++ +S+C
Sbjct: 97  RLLYEMPDC----DPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSC 152

Query: 339 TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN 398
              + L +G +IHS  VK+G    V V  SL+NMY+KC +   A+ VFD +  K++ +WN
Sbjct: 153 AANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWN 212

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           ++I+ Y Q+G    A   F KM + D    +++WN +ISGY Q G   EA+ +F +M   
Sbjct: 213 ALISLYMQSGQFELAASQFEKMPDRD----IVSWNSMISGYSQQGYNLEALAIFSKMLNE 268

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
             +K                                   P+  T+ S+L ACA L   N 
Sbjct: 269 PSLK-----------------------------------PDNFTLASILSACANLEKLNI 293

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKS------------------------------ 548
            K+IH  +LR   E+S  V N+LI  YAKS                              
Sbjct: 294 GKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGY 353

Query: 549 ---GNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
              GN+  +R IF+ +  +D++ W ++I GYV +G W+ AL+LF  M + G +PN  T  
Sbjct: 354 TKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLA 413

Query: 606 SIILAHSLAGMVDLGKKVFCS-ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           +++   S   +++ GK++  S I       P +   +A+I +Y ++G +  A   + D+P
Sbjct: 414 AMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT--NALIAMYAKTGNINVAKR-VFDLP 470

Query: 665 IEPDSSI-WEALLTACRIHGNIDLAVLAIERLFDL 698
                 + W +++ A   HG    A+   ER+  +
Sbjct: 471 NGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV 505



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 136/559 (24%), Positives = 225/559 (40%), Gaps = 141/559 (25%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVK 94
           G  + AI +   + ++     + T  N+L +C  + ++ + RK+H+F + L     V V 
Sbjct: 121 GLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVA 180

Query: 95  TKLLSVYAKCGCLDDAREV-------------------------------FEDMRERNLY 123
           T LL++YAKCG    A+ V                               FE M +R++ 
Sbjct: 181 TSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIV 240

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
           +W++MI  YS+     E + +F  M+ +  L PD+F    IL AC N      GK +H+ 
Sbjct: 241 SWNSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAY 300

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCG-----KLIW--------------------------- 210
           +++        V N+++++Y K G     +LI                            
Sbjct: 301 ILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVK 360

Query: 211 -ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE----------------- 252
            AR  F  + ++D VAW +MI GY Q G  ++A  LF  M  E                 
Sbjct: 361 PAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSS 420

Query: 253 --------------EIKLGVVT----FNILIRSYNQLGQCDVAMEMVKRMESL-GITPDV 293
                          IK G  +     N LI  Y + G  +VA    KR+  L     ++
Sbjct: 421 SLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVA----KRVFDLPNGKKEI 476

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            +WT MI   AQ+G   +A++LF+ M  VG+ P+ +T    +SACT +  +  G + +  
Sbjct: 477 VSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYY-- 534

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
                            NM ++  E+E             +  +  MI  Y +AG   +A
Sbjct: 535 -----------------NMMTEVHEIEPT-----------LSHYACMIDLYGRAGLLQEA 566

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
           Y LFI  +   + P+ I W  L++    + N D A    +R+   D    N+ ++ +L  
Sbjct: 567 Y-LFI--ESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLID--PGNSGAYLALAN 621

Query: 474 GYQQLGQKNNALGVFRKMQ 492
            Y   G+  NA    + M+
Sbjct: 622 VYSACGKWENAAQTRKLMK 640


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  416 bits (1068), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 249/778 (32%), Positives = 393/778 (50%), Gaps = 89/778 (11%)

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           ++AK G L DAR VF +M ER+  +W+ M+   +R  R+ E ++    M  DG  P  F 
Sbjct: 1   MFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFT 60

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
              +L +C        G+ +HS V+KLG+     V NSVL +Y KCG    A   FE M 
Sbjct: 61  LTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMP 120

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
            +   +WN                              +V+ N        LG+ D+A  
Sbjct: 121 VRSVSSWN-----------------------------AMVSLN------THLGRMDLAES 145

Query: 280 MVKRMESLGITPD--VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM-PNGVTITSAIS 336
           + + M      PD  + +W  MI+G+ QNG  ++AL LF  M     M P+  TITS +S
Sbjct: 146 LFESM------PDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLS 199

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           AC +L  + +G ++H+  ++     +  V N+LI+ Y+K                     
Sbjct: 200 ACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAK--------------------- 238

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMG 456
                     +G    A  +  +  E+D+  NVI++  L+ GY++ G+ + A ++F  M 
Sbjct: 239 ----------SGSVENARRIMDQSMETDL--NVISFTALLEGYVKIGDMESAREMFGVMN 286

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
             D V     +W ++I GY+Q G+ + A+ +FR M +    PN  T+ +VL  CA L   
Sbjct: 287 NRDVV-----AWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACL 341

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICG 575
           +  K+IH   +R  LE S  V N++I  YA+SG+  ++R +FD +   K+ ITW S+I  
Sbjct: 342 DYGKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVA 401

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
              HG    A+ LF++M   G++P+R T++ ++ A S AG V+ GK+ +  I   +QI P
Sbjct: 402 LAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAP 461

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
            + HY+ M+DL  R+G   EA EFI  MP+EPD+  W +LL+ACR+H N +LA LA E+L
Sbjct: 462 EMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKL 521

Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
             ++P +      I  +Y+ CG+  DA ++ K  +E   R   G  W  +++ ++ F   
Sbjct: 522 LSIDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGAD 581

Query: 756 GWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALI 810
                  D +Y+    + E +        L      +++E KEE+   HSEKLA+AF LI
Sbjct: 582 DVVHPQRDAVYAMAARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLI 641

Query: 811 GSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            S+    T+R++KN+R+C  CH   K +S +   EI + D+   HHF++G CSC DYW
Sbjct: 642 -STPEKTTLRVMKNLRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 226/511 (44%), Gaps = 78/511 (15%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           GR  EAI  L  +   G    + T  N+L +C  + +  + RK+H+F+  L     V V 
Sbjct: 37  GRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVA 96

Query: 95  TKLLSVYAKC-------------------------------GCLDDAREVFEDMRERNLY 123
             +L++Y KC                               G +D A  +FE M +R++ 
Sbjct: 97  NSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIV 156

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
           +W+AMI  Y+++    + ++LF  M+ +  + PD+F    +L AC N G+   GK +H+ 
Sbjct: 157 SWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY 216

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD--GVAWNSMISGYFQIGEND 240
           +++  M+   +V N++++ Y K G +  ARR  +   E D   +++ +++ GY +IG+ +
Sbjct: 217 ILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDME 276

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            A  +F  M   +    VV +  +I  Y Q G+ D A+++ + M + G  P+        
Sbjct: 277 SAREMFGVMNNRD----VVAWTAMIVGYEQNGRNDEAIDLFRSMITCG--PE-------- 322

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
                                    PN  T+ + +S C  L  L  G +IH  A++    
Sbjct: 323 -------------------------PNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 357

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMI-KDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
               V N++I MY++      A R+FD +   K+  +W SMI    Q G   +A  LF +
Sbjct: 358 QSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEE 417

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M  + V P+ IT+  ++S     G  +E    + ++    ++    + +  ++    + G
Sbjct: 418 MLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAG 477

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             + A    R+M      P+ +   S+L AC
Sbjct: 478 LFSEAQEFIRRMP---VEPDAIAWGSLLSAC 505



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 169/346 (48%), Gaps = 18/346 (5%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           L+     S S+  AR++    ++ T+++V   T LL  Y K G ++ ARE+F  M  R++
Sbjct: 232 LISTYAKSGSVENARRIMD-QSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDV 290

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
             W+AMI  Y ++ R  E ++LF  M+  G  P+ +    +L  C +    + GK +H  
Sbjct: 291 VAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCR 350

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDE 241
            I+  +     V N+++ +Y + G   WARR F+ +   K+ + W SMI    Q G+ +E
Sbjct: 351 AIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE 410

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMI 300
           A  LF++M R  ++   +T+  ++ + +  G  +       ++++   I P++  + CM+
Sbjct: 411 AVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMV 470

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV-KMGF 359
              A+ G  S+A +  + M    V P+ +   S +SAC   K      E+  LA  K+  
Sbjct: 471 DLLARAGLFSEAQEFIRRMP---VEPDAIAWGSLLSACRVHK----NAELAELAAEKLLS 523

Query: 360 TDDVLVG--NSLINMYSKCEELEAAERVFDMIKDKDV-----YSWN 398
            D    G  +++ N+YS C     A R++   K+K V     +SW 
Sbjct: 524 IDPNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFSWT 569



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 12/206 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NGR +EAI +  S+ T G +    T   +L  C     +   +++H   +  + E    V
Sbjct: 303 NGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSSV 362

Query: 94  KTKLLSVYAKCGCLDDAREVFEDM-RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              ++++YA+ G    AR +F+ +   +   TW++MI A ++  +  E V LF  M++ G
Sbjct: 363 SNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAG 422

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLV-----IKLGMSCVRRVRNSVLAVYVKCGK 207
           + PD   +  +L AC + G    GK  +  +     I   MS        ++ +  + G 
Sbjct: 423 VEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHY----ACMVDLLARAGL 478

Query: 208 LIWARRFFESMD-EKDGVAWNSMISG 232
              A+ F   M  E D +AW S++S 
Sbjct: 479 FSEAQEFIRRMPVEPDAIAWGSLLSA 504


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 243/726 (33%), Positives = 397/726 (54%), Gaps = 39/726 (5%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           +  +LQ C     F  GK +HS++    +     +   +++ Y  CG L   RR F++M+
Sbjct: 102 YSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTME 161

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
           +K+   WN M+S Y +IG+  E+               +  F I++    +  + + A E
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKES---------------ICLFKIMVEKGIEGKRPESAFE 206

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           +  ++       DV +W  MISG+  NG T + L ++K+M ++G+  +  TI S +  C 
Sbjct: 207 LFDKL----CDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCA 262

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           +   L++G  +HSLA+K  F   +   N+L++MYSKC +L+ A RVF+ + +++V SW S
Sbjct: 263 NSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           MIAGY + G    A +L  +M++  V  +V+    ++    ++G+ D   D+   +  N+
Sbjct: 323 MIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKM----------QSSCFYPNCVTILSVLPA 509
            ++ N    N+L+  Y + G    A  VF  M                P+  T+  VLPA
Sbjct: 383 -MESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPA 441

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           CA L A  + KEIHG +LR    S   V N+L+D Y K G +  +R +FD + SKD+++W
Sbjct: 442 CASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSW 501

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
             +I GY +HG+ + A+  F++M+  G++P+  +F+SI+ A S +G+++ G + F  +  
Sbjct: 502 TVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKN 561

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            + I P +EHY+ M+DL  R+G L +A EFIE +PI PD++IW ALL  CR + +I+LA 
Sbjct: 562 DFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAE 621

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR-KLERENTRRNSFGQCWIEVKNL 748
              ER+F+LEP +     L+  IYA   K E+  ++R K+ ++  R+N  G  WIE+K  
Sbjct: 622 KVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNP-GCSWIEIKGK 680

Query: 749 VYTFVTG-GWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEK 802
           V  FV+G   S  +S  + S L+ +      E    ++ ++ +  +E +KE     HSEK
Sbjct: 681 VNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEK 740

Query: 803 LALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQC 862
           LA+AF L+ +     TIR+ KN+R+C  CHE AK++S     EI L D    HHFK+G C
Sbjct: 741 LAMAFGLL-TLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFHHFKDGYC 799

Query: 863 SCGDYW 868
           SC  +W
Sbjct: 800 SCRGFW 805



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 136/490 (27%), Positives = 232/490 (47%), Gaps = 65/490 (13%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EID 90
            C  G L  A+ ++     + +++   TY ++LQ C    S    +K+H+ +   +  +D
Sbjct: 76  FCQLGDLENAMELI--CMCKKSELETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVD 133

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
             +  KL+S YA CG L + R VF+ M ++N+Y W+ M+  Y++   ++E + LF +MV+
Sbjct: 134 EALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVE 193

Query: 151 DGL---FPDDF--LFPK------------------------------------------- 162
            G+    P+    LF K                                           
Sbjct: 194 KGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLAT 253

Query: 163 ---ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
              +L  C N G    GK +HSL IK          N++L +Y KCG L  A R FE M 
Sbjct: 254 IISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 313

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
           E++ V+W SMI+GY + G +D A +L  +M +E +KL VV    ++ +  + G  D   +
Sbjct: 314 ERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKD 373

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM---------SFVG-VMPNGV 329
           +   +++  +  ++F    ++  +A+ G    A  +F  M         + +G + P+  
Sbjct: 374 VHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSR 433

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           T+   + AC  L AL  G EIH   ++ G++ D  V N+L+++Y KC  L  A  +FDMI
Sbjct: 434 TMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
             KD+ SW  MIAGY   GY  +A   F +M+++ + P+ +++  ++     +G  ++  
Sbjct: 494 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553

Query: 450 DLFQRMGKND 459
             F  M KND
Sbjct: 554 RFFYIM-KND 562



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 190/435 (43%), Gaps = 71/435 (16%)

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           V  +N  I  + QLG  + AME++                CM        +         
Sbjct: 66  VTDYNAKILHFCQLGDLENAMELI----------------CMCKKSELETK--------- 100

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
                       T +S +  C  LK+   G ++HS+        D  +G  L++ Y+ C 
Sbjct: 101 ------------TYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCG 148

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           +L+   RVFD ++ K+VY WN M++ Y + G               D   ++  + +++ 
Sbjct: 149 DLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG---------------DFKESICLFKIMVE 193

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
             I+    + A +LF ++       R+  SWNS+I+GY   G     LG++++M      
Sbjct: 194 KGIEGKRPESAFELFDKL-----CDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID 248

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
            +  TI+SVL  CA     +  K +H   ++ S E  +   N+L+D Y+K G++  +  +
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRV 308

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           F+ M  +++++W S+I GY   G    A+ L  QM+  G+K +     SI+ A + +G +
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSL 368

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM-------------P 664
           D GK V   I +   +   +   +A++D+Y + G +E A      M              
Sbjct: 369 DNGKDVHDYI-KANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGE 427

Query: 665 IEPDSSIWEALLTAC 679
           ++PDS     +L AC
Sbjct: 428 LKPDSRTMACVLPAC 442



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 168/360 (46%), Gaps = 33/360 (9%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           +GR + AI +L  +  +G K+      ++L AC  S S+   + +H ++     E ++FV
Sbjct: 330 DGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFV 389

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +YAKCG ++ A  VF  M  +++ +W+ MIG                      L
Sbjct: 390 CNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGE---------------------L 428

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD      +L AC +    E GK +H  +++ G S  R V N+++ +YVKCG L  AR 
Sbjct: 429 KPDSRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARL 488

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ +  KD V+W  MI+GY   G  +EA   F++M    I+   V+F  ++ + +  G 
Sbjct: 489 LFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGL 548

Query: 274 CDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            +        M++   I P +  + CM+   ++ G  S+A +  + +    + P+     
Sbjct: 549 LEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLP---IAPDATIWG 605

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDD---VLVGNSLINMYSKCEELEAAERVFDMI 389
           + +  C +   + +  ++     ++   +    VL    L N+Y++ E+ E  +R+ + I
Sbjct: 606 ALLCGCRNYHDIELAEKVAERVFELEPENSGYYVL----LANIYAEAEKWEEVKRLREKI 661


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 254/814 (31%), Positives = 415/814 (50%), Gaps = 88/814 (10%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
           NL+     + S+  A   H F  +  +   F    L+S YAK G  + +R +  +M + +
Sbjct: 50  NLMTFYAKTGSLRFAH--HVFDEMPLK-STFSWNTLISGYAKQGNFEVSRRLLYEMPDCD 106

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
             +W+A+I  Y++   +   + +F  M+ + + P  F    +L +C      + G+ +HS
Sbjct: 107 PVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHS 166

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
            V+KLG+     V  S+L +Y KCG  + A+  F+ M  K+                   
Sbjct: 167 FVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN------------------- 207

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                           + T+N LI  Y Q GQ ++A    ++M       D+ +W  MIS
Sbjct: 208 ----------------ISTWNALISLYMQSGQFELAASQFEKMPDR----DIVSWNSMIS 247

Query: 302 GFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           G++Q G   +AL +F +M +   + P+  T+ S +SAC +L+ L +G +IH+  ++    
Sbjct: 248 GYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETE 307

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
               VGN+LI+MY+K   +E A  + +  +  ++                          
Sbjct: 308 TSGAVGNALISMYAKSGGVEIARLIVEHNRTSNL-------------------------- 341

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
                  N+I +  L+ GY + GN   A ++F ++   D V     +W ++I GY Q G 
Sbjct: 342 -------NIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVV-----AWTAMIVGYVQNGL 389

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
            N+AL +FR M +    PN  T+ ++L   + L      K+IH   ++    S+  V N+
Sbjct: 390 WNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNA 449

Query: 541 LIDTYAKSGNIVYSRTIFD-GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
           LI  YAK+GNI  ++ +FD     K+I++W S+I     HG    A++LF++M S G+KP
Sbjct: 450 LIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKP 509

Query: 600 NRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEF 659
           +  T++ ++ A +  G+V+ G+K +  +TE ++I P + HY+ MIDLYGR+G L+EA  F
Sbjct: 510 DHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLF 569

Query: 660 IEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKP 719
           IE MPIEPD+  W +LL +C+IH N DLA +A ERL  ++PG+      +  +Y+ CGK 
Sbjct: 570 IESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKW 629

Query: 720 EDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA- 778
           E+A + RKL ++   R   G  WI +KN V+ F          D +Y  +  + E +   
Sbjct: 630 ENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIKKM 689

Query: 779 ---RSSHSGLC-IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHET 834
                + S L  +EEE KE+I   HSEKLA+AF L+ + +    +RI+KN+R+C  CH  
Sbjct: 690 GFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENT-ALRIMKNLRVCNDCHSA 748

Query: 835 AKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            K++S +   EI + D+   HHFK+G CSC DYW
Sbjct: 749 IKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 157/575 (27%), Positives = 257/575 (44%), Gaps = 116/575 (20%)

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
            F  ILQ      D  AG+ +H  +IK G+     + N+++  Y K G L    RF    
Sbjct: 12  FFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSL----RF---- 63

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
                                  AH +FD+M  +       ++N LI  Y + G  +V+ 
Sbjct: 64  -----------------------AHHVFDEMPLK----STFSWNTLISGYAKQGNFEVSR 96

Query: 279 EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
            ++  M       D  +WT +I G+ Q G    A+ +F +M    V P+  T+++ +S+C
Sbjct: 97  RLLYEMPDC----DPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSC 152

Query: 339 TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN 398
              + L +G +IHS  VK+G    V V  SL+NMY+KC +   A+ VFD +  K++ +WN
Sbjct: 153 AANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWN 212

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           ++I+ Y Q+G    A   F KM + D    +++WN +ISGY Q G   EA+ +F +M   
Sbjct: 213 ALISLYMQSGQFELAASQFEKMPDRD----IVSWNSMISGYSQQGYNLEALVIFSKMLNE 268

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
             +K                                   P+  T+ S+L ACA L   N 
Sbjct: 269 PSLK-----------------------------------PDNFTLASILSACANLEKLNI 293

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKS------------------------------ 548
            K+IH  +LR   E+S  V N+LI  YAKS                              
Sbjct: 294 GKQIHAYILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGY 353

Query: 549 ---GNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
              GN+  +R IF+ +  +D++ W ++I GYV +G W+ AL+LF  M + G +PN  T  
Sbjct: 354 TKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLA 413

Query: 606 SIILAHSLAGMVDLGKKVFCS-ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           +++   S   +++ GK++  S I       P +   +A+I +Y ++G +  A   + D+P
Sbjct: 414 AMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT--NALIAMYAKTGNINVAKR-VFDLP 470

Query: 665 IEPDSSI-WEALLTACRIHGNIDLAVLAIERLFDL 698
                 + W +++ A   HG    A+   ER+  +
Sbjct: 471 NGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSV 505



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 136/559 (24%), Positives = 225/559 (40%), Gaps = 141/559 (25%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVK 94
           G  + AI +   + ++     + T  N+L +C  + ++ + RK+H+F + L     V V 
Sbjct: 121 GLFDNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVA 180

Query: 95  TKLLSVYAKCGCLDDAREV-------------------------------FEDMRERNLY 123
           T LL++YAKCG    A+ V                               FE M +R++ 
Sbjct: 181 TSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIV 240

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
           +W++MI  YS+     E + +F  M+ +  L PD+F    IL AC N      GK +H+ 
Sbjct: 241 SWNSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAY 300

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCG-----KLIW--------------------------- 210
           +++        V N+++++Y K G     +LI                            
Sbjct: 301 ILRAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVK 360

Query: 211 -ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE----------------- 252
            AR  F  + ++D VAW +MI GY Q G  ++A  LF  M  E                 
Sbjct: 361 PAREIFNKLRDRDVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSS 420

Query: 253 --------------EIKLGVVT----FNILIRSYNQLGQCDVAMEMVKRMESL-GITPDV 293
                          IK G  +     N LI  Y + G  +VA    KR+  L     ++
Sbjct: 421 SLTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVA----KRVFDLPNGKKEI 476

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            +WT MI   AQ+G   +A++LF+ M  VG+ P+ +T    +SACT +  +  G + +  
Sbjct: 477 VSWTSMIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYY-- 534

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
                            NM ++  E+E             +  +  MI  Y +AG   +A
Sbjct: 535 -----------------NMMTEVHEIEPT-----------LSHYACMIDLYGRAGLLQEA 566

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
           Y LFI  +   + P+ I W  L++    + N D A    +R+   D    N+ ++ +L  
Sbjct: 567 Y-LFI--ESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLID--PGNSGAYLALAN 621

Query: 474 GYQQLGQKNNALGVFRKMQ 492
            Y   G+  NA    + M+
Sbjct: 622 VYSACGKWENAAQTRKLMK 640


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 268/832 (32%), Positives = 428/832 (51%), Gaps = 94/832 (11%)

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           W  ++ +  R    RE V  +  M+  G+ PD++ FP +L+A  +  D E GK +H+ V 
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 185 KLGMSCVR-RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
           K G       V N+++ +Y KCG      + F+ + E++ V+WNS+IS      + + A 
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 244 RLFDKMCREEIK------LGVVT-------------------------------FNILIR 266
             F  M  E ++      + VVT                                N L+ 
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            Y +LG+   +  +   + S G   D+ TW  ++S   QN +  +AL+  +EM   GV P
Sbjct: 245 MYGKLGKLASSKVL---LGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD-VLVGNSLINMYSKCEELEAAERV 385
           +  TI+S + AC+ L+ L  G E+H+ A+K G  D+   VG++L++MY  C+++ +  RV
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES-DVPPNVITWNVLISGYIQNG- 443
           FD + D+ +  WN+MIAGY Q  +  +A  LFI M+ES  +  N  T   ++   +++G 
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420

Query: 444 -NEDEAV--------------------DLFQRMGKNDKV--------KRNTASWNSLIAG 474
            +  EA+                    D++ R+GK D           R+  +WN++I G
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480

Query: 475 YQQLGQKNNALGVFRKMQS-----------SCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           Y       +AL +  KMQ+               PN +T++++LP+CA L A  K KEIH
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
              ++ +L + + V ++L+D YAK G +  SR +FD +  K++ITWN +I  Y +HG   
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            A+DL   M   G+KPN  TF+S+  A S +GMVD G ++F  +   Y + P  +HY+ +
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPD-SSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           +DL GR+G+++EA + +  MP + + +  W +LL A RIH N+++  +A + L  LEP  
Sbjct: 661 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 720

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYS 762
                L+  IY+  G  + A +VR+  +E   R   G  WIE  + V+ FV G  S   S
Sbjct: 721 ASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQS 780

Query: 763 DLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
           + L  +L+ +      E     +S     +EE+EKE +   HSEKLA+AF ++ +S  P 
Sbjct: 781 EKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTS--PG 838

Query: 818 T-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           T IR+ KN+R+C  CH   K++S +   EI L D +  H FKNG CSCGDYW
Sbjct: 839 TIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 232/484 (47%), Gaps = 55/484 (11%)

Query: 59  TYINLLQACID---SNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           T ++++ AC +      + + +++HA+     E++ F+   L+++Y K G L  ++ +  
Sbjct: 201 TLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLG 260

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
               R+L TW+ ++ +  ++++  E +E    MV +G+ PD+F    +L AC +      
Sbjct: 261 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 320

Query: 176 GKLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
           GK +H+  +K G +     V ++++ +Y  C +++  RR F+ M ++    WN+MI+GY 
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380

Query: 235 QIGENDEAHRLFDKM--------------------------CREEIKLGVVTF------- 261
           Q   + EA  LF  M                           R+E   G V         
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 440

Query: 262 ---NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
              N L+  Y++LG+ D+AM +  +ME      D+ TW  MI+G+  +     AL L  +
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMEDR----DLVTWNTMITGYVFSEHHEDALLLLHK 496

Query: 319 M-----------SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
           M           S V + PN +T+ + + +C  L ALA G EIH+ A+K     DV VG+
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           +L++MY+KC  L+ + +VFD I  K+V +WN +I  Y   G   +A +L   M    V P
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           N +T+  + +    +G  DE + +F  M  +  V+ ++  +  ++    + G+   A  +
Sbjct: 617 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 676

Query: 488 FRKM 491
              M
Sbjct: 677 MNMM 680



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 126/542 (23%), Positives = 235/542 (43%), Gaps = 68/542 (12%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-- 83
           +T L  LC N +L EA+  L  +  +G +    T  ++L AC     +   ++LHA+   
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330

Query: 84  NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
           N   + + FV + L+ +Y  C  +   R VF+ M +R +  W+AMI  YS+++  +E + 
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390

Query: 144 LFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
           LF  M +  GL  +      ++ AC   G F   + +H  V+K G+   R V+N+++ +Y
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 450

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-----------CR 251
            + GK+  A R F  M+++D V WN+MI+GY     +++A  L  KM            R
Sbjct: 451 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASR 510

Query: 252 EEIKLGVVTFNILIRSYNQLG-----------------QCDVA--------------MEM 280
             +K   +T   ++ S   L                    DVA              ++M
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 570

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
            +++       +V TW  +I  +  +G   +A+DL + M   GV PN VT  S  +AC+ 
Sbjct: 571 SRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 630

Query: 341 LKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD--KDVYSW 397
              +  G+ I + +    G          ++++  +   ++ A ++ +M+        +W
Sbjct: 631 SGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAW 690

Query: 398 NSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-YIQNGNEDEAVDLFQ 453
           +S++     +        A +  I+++     PNV +  VL++  Y   G  D+A ++ +
Sbjct: 691 SSLLGASRIHNNLEIGEIAAQNLIQLE-----PNVASHYVLLANIYSSAGLWDKATEVRR 745

Query: 454 RMGKNDKVKRNTASW-------NSLIAGYQQLGQKNNALG----VFRKMQSSCFYPNCVT 502
            M +    K    SW       +  +AG     Q     G    ++ +M+   + P+   
Sbjct: 746 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSC 805

Query: 503 IL 504
           +L
Sbjct: 806 VL 807


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 243/726 (33%), Positives = 398/726 (54%), Gaps = 39/726 (5%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           +  +LQ C     F  GK +HS++    +     +   +++ Y  CG L   RR F++M+
Sbjct: 102 YGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTME 161

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
           +K+   WN M+S Y +IG+  E+               +  F I++    +  + + A E
Sbjct: 162 KKNVYLWNFMVSEYAKIGDFKES---------------ICLFKIMVEKGIEGKRPESAFE 206

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           +  ++       DV +W  MISG+  NG T + L ++K+M ++G+  +  TI S +  C 
Sbjct: 207 LFDKL----CDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCA 262

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           +   L++G  +HSLA+K  F   +   N+L++MYSKC +L+ A RVF+ + +++V SW S
Sbjct: 263 NSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 322

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           MIAGY + G    A +L  +M++  V  +V+    ++    ++G+ D   D+   +  N+
Sbjct: 323 MIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 382

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKM----------QSSCFYPNCVTILSVLPA 509
            ++ N    N+L+  Y + G    A  VF  M                P+  T+  VLPA
Sbjct: 383 -MESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSRTMACVLPA 441

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           CA L A  + KEIHG +LR    S   V N+L+D Y K G +  +R +FD + SKD+++W
Sbjct: 442 CASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSW 501

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
             +I GY +HG+ + A+  F++M+  G++P+  +F+SI+ A S +G+++ G + F  +  
Sbjct: 502 TVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKN 561

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            + I P +EHY+ M+DL  R+G L +A EF+E +PI PD++IW ALL  CR + +I+LA 
Sbjct: 562 DFNIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAE 621

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR-KLERENTRRNSFGQCWIEVKNL 748
              ER+F+LEP +     L+  IYA   K E+  ++R K+ ++  R+N  G  WIE+K  
Sbjct: 622 KVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNP-GCSWIEIKGK 680

Query: 749 VYTFVTG-GWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEK 802
           V  FV+G   S  +S  + S L+ +      E    ++ ++ +  +E +KE     HSEK
Sbjct: 681 VNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMALCGHSEK 740

Query: 803 LALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQC 862
           LA+AF L+ +     TIR+ KN+R+C  CHE AK++S     EI L DS   HHFK+G C
Sbjct: 741 LAMAFGLL-TLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGYC 799

Query: 863 SCGDYW 868
           SC  +W
Sbjct: 800 SCRGFW 805



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 232/490 (47%), Gaps = 65/490 (13%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EID 90
            C  G L  A+ ++     Q +++   TY ++LQ C    S    +K+H+ +   +  +D
Sbjct: 76  FCQLGDLENAMELI--CMCQKSELETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVD 133

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
             +  KL+S YA CG L + R VF+ M ++N+Y W+ M+  Y++   ++E + LF +MV+
Sbjct: 134 GALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVE 193

Query: 151 DGL---FPDDF--LFPK------------------------------------------- 162
            G+    P+    LF K                                           
Sbjct: 194 KGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLAT 253

Query: 163 ---ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
              +L  C N G    GK +HSL IK          N++L +Y KCG L  A R FE M 
Sbjct: 254 IISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMG 313

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
           E++ V+W SMI+GY + G +D A +L  +M +E +KL VV    ++ +  + G  D   +
Sbjct: 314 ERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKD 373

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM---------SFVG-VMPNGV 329
           +   +++  +  ++F    ++  +A+ G    A  +F  M         + +G + P+  
Sbjct: 374 VHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPDSR 433

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           T+   + AC  L AL  G EIH   ++ G++ D  V N+L+++Y KC  L  A  +FDMI
Sbjct: 434 TMACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMI 493

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
             KD+ SW  MIAGY   GY  +A   F +M+++ + P+ +++  ++     +G  ++  
Sbjct: 494 PSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGW 553

Query: 450 DLFQRMGKND 459
             F  M KND
Sbjct: 554 RFFYIM-KND 562



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 192/435 (44%), Gaps = 71/435 (16%)

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           V  +N  I  + QLG  + AME++                CM           Q  +L  
Sbjct: 66  VTDYNAKILHFCQLGDLENAMELI----------------CMC----------QKSELET 99

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
           +           T  S +  C  LK+   G ++HS+        D  +G  L++ Y+ C 
Sbjct: 100 K-----------TYGSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCG 148

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           +L+   RVFD ++ K+VY WN M++ Y + G               D   ++  + +++ 
Sbjct: 149 DLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG---------------DFKESICLFKIMVE 193

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
             I+    + A +LF ++       R+  SWNS+I+GY   G     LG++++M      
Sbjct: 194 KGIEGKRPESAFELFDKL-----CDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGID 248

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
            +  TI+SVL  CA     +  K +H   ++ S E  +   N+L+D Y+K G++  +  +
Sbjct: 249 VDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRV 308

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           F+ M  +++++W S+I GY   G    A+ L  QM+  G+K +     SI+ A + +G +
Sbjct: 309 FEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSL 368

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM-------------P 664
           D GK V   I +   +   +   +A++D+Y + G +E A      M              
Sbjct: 369 DNGKDVHDYI-KANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGE 427

Query: 665 IEPDSSIWEALLTAC 679
           ++PDS     +L AC
Sbjct: 428 LKPDSRTMACVLPAC 442



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/287 (21%), Positives = 113/287 (39%), Gaps = 57/287 (19%)

Query: 461 VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
           +      +N+ I  + QLG   NA+ +    Q S       T  SVL  CA L +    K
Sbjct: 62  IDHQVTDYNAKILHFCQLGDLENAMELICMCQKSELETK--TYGSVLQLCAGLKSFTDGK 119

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK---------------- 564
           ++H  +   S+     +   L+  YA  G++   R +FD M  K                
Sbjct: 120 KVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179

Query: 565 -----------------------------------DIITWNSLICGYVLHGFWHAALDLF 589
                                              D+I+WNS+I GYV +G     L ++
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIY 239

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC-SITECYQIIPMIEHYSAMIDLYG 648
            QM   G+  +  T +S+++  + +G + LGK V   +I   ++    I   + ++D+Y 
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFE--RRINFSNTLLDMYS 297

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
           + G L+ A+   E M  E +   W +++      G  D A+  ++++
Sbjct: 298 KCGDLDGALRVFEKMG-ERNVVSWTSMIAGYTRDGRSDGAIKLLQQM 343


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 267/918 (29%), Positives = 438/918 (47%), Gaps = 95/918 (10%)

Query: 32   LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACID-SNSIHLARKLHA-FLNLVTEI 89
            L     + E   +   + ++       T+  +L+AC   S +  +  ++HA  L      
Sbjct: 121  LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 180

Query: 90   DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
               V   L+ +Y++ G +D AR VF+ +R ++  +W AMI   S+++   E + LF  M 
Sbjct: 181  STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 240

Query: 150  QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
              G+ P  + F  +L AC      E G+ +H LV+KLG S    V N+++++Y   G LI
Sbjct: 241  VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 300

Query: 210  WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------CR 251
             A   F +M ++D V +N++I+G  Q G  ++A  LF +M                  C 
Sbjct: 301  SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 360

Query: 252  EE-------------IKLGVVTFN----ILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
             +              KLG  + N     L+  Y +    + A++     E      +V 
Sbjct: 361  ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETE----VENVV 416

Query: 295  TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
             W  M+  +        +  +F++M    ++PN  T  S +  C  L  L +G +IHS  
Sbjct: 417  LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 476

Query: 355  VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
            +K  F  +  V + LI+MY+K  +L+ A  +      KDV SW +MIAGY Q  +  KA 
Sbjct: 477  IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 536

Query: 415  ELFIKMQESDVPPNVITW-----------------------------------NVLISGY 439
              F +M +  +  + +                                     N L++ Y
Sbjct: 537  TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY 596

Query: 440  IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
             + G  +E+   F++    D +     +WN+L++G+QQ G    AL VF +M       N
Sbjct: 597  SRCGKIEESYLAFEQTEAGDNI-----AWNALVSGFQQSGNNEEALRVFVRMNREGIDNN 651

Query: 500  CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
              T  S + A +      + K++H  + +   +S   V N+LI  YAK G+I  +   F 
Sbjct: 652  NFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFL 711

Query: 560  GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
             +S+K+ ++WN++I  Y  HGF   ALD FDQM    ++PN  T + ++ A S  G+VD 
Sbjct: 712  EVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDK 771

Query: 620  GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
            G   F S+   Y + P  EHY  ++D+  R+G L  A EFI++MPI+PD+ +W  LL+AC
Sbjct: 772  GIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSAC 831

Query: 680  RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFG 739
             +H N+++   A   L +LEP D     L+  +YA+  K +     R+  +E   +   G
Sbjct: 832  VVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPG 891

Query: 740  QCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEE 790
            Q WIEVKN +++F  G  +   +D ++ + Q    ++T R+S  G           ++ E
Sbjct: 892  QSWIEVKNSIHSFYVGDQNHPLADEIHEYFQ----DLTKRASEIGYVQDCFSLLNELQHE 947

Query: 791  EKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLAD 850
            +K+ I  IHSEKLA++F L+ S  A   I ++KN+R+C  CH   K+VS + + EI + D
Sbjct: 948  QKDPIIFIHSEKLAISFGLL-SLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRD 1006

Query: 851  SKCLHHFKNGQCSCGDYW 868
            +   HHF+ G CSC DYW
Sbjct: 1007 AYRFHHFEGGACSCKDYW 1024



 Score =  247 bits (630), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 189/707 (26%), Positives = 324/707 (45%), Gaps = 74/707 (10%)

Query: 45  LDSIATQGAKVRRNTYINLLQACIDSN-SIHLARKLHA-FLNLVTEIDVFVKTKLLSVYA 102
           +DS+  +G +    T   LL+ C+ +N S+   RKLH+  L L  + +  +  KL   Y 
Sbjct: 32  IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 91

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
             G L  A +VF++M ER ++TW+ MI   +      EV  LF  MV + + P++  F  
Sbjct: 92  FKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSG 151

Query: 163 ILQAC-GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK 221
           +L+AC G    F+  + +H+ ++  G+     V N ++ +Y + G +  ARR F+ +  K
Sbjct: 152 VLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK 211

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKM------------------CR--EEIKLG---- 257
           D  +W +MISG  +     EA RLF  M                  C+  E +++G    
Sbjct: 212 DHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 271

Query: 258 -----------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN 306
                          N L+  Y  LG    A  +   M       D  T+  +I+G +Q 
Sbjct: 272 GLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ----RDAVTYNTLINGLSQC 327

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           G   +A++LFK M   G+ P+  T+ S + AC+    L  G ++H+   K+GF  +  + 
Sbjct: 328 GYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 387

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
            +L+N+Y+KC ++E A   F   + ++V  WN M+  Y        ++ +F +MQ  ++ 
Sbjct: 388 GALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 447

Query: 427 PNVITWNVLISGYIQNGNEDEA----------------------VDLFQRMGKNDK---- 460
           PN  T+  ++   I+ G+ +                        +D++ ++GK D     
Sbjct: 448 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 507

Query: 461 ----VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
                 ++  SW ++IAGY Q    + AL  FR+M       + V + + + ACA L A 
Sbjct: 508 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 567

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
            + ++IH         S LP  N+L+  Y++ G I  S   F+   + D I WN+L+ G+
Sbjct: 568 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 627

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
              G    AL +F +M   G+  N  TF S + A S    +  GK+V   IT+       
Sbjct: 628 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSE 686

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
            E  +A+I +Y + G + +A +   ++  + + S W A++ A   HG
Sbjct: 687 TEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINAYSKHG 732


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 270/922 (29%), Positives = 439/922 (47%), Gaps = 103/922 (11%)

Query: 32   LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACID-SNSIHLARKLHA-FLNLVTEI 89
            L     + E   +   + ++       T+  +L+AC   S +  +  ++HA  L      
Sbjct: 161  LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 220

Query: 90   DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
               V   L+ +Y++ G +D AR VF+ +R ++  +W AMI   S+++   E + LF  M 
Sbjct: 221  STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280

Query: 150  QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
              G+ P  + F  +L AC      E G+ +H LV+KLG S    V N+++++Y   G LI
Sbjct: 281  VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 340

Query: 210  WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------CR 251
             A   F +M ++D V +N++I+G  Q G  ++A  LF +M                  C 
Sbjct: 341  SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 400

Query: 252  EE-------------IKLGVVTFN----ILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
             +              KLG  + N     L+  Y +    + A++     E      +V 
Sbjct: 401  ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETE----VENVV 456

Query: 295  TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
             W  M+  +        +  +F++M    ++PN  T  S +  C  L  L +G +IHS  
Sbjct: 457  LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516

Query: 355  VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
            +K  F  +  V + LI+MY+K  +L+ A  +      KDV SW +MIAGY Q  +  KA 
Sbjct: 517  IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576

Query: 415  ELFIKMQE---------------------------------------SDVPPNVITWNVL 435
              F +M +                                       SD+P      N L
Sbjct: 577  TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ----NAL 632

Query: 436  ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
            ++ Y + G  +E+   F++    D +     +WN+L++G+QQ G    AL VF +M    
Sbjct: 633  VTLYSRCGKIEESYLAFEQTEAGDNI-----AWNALVSGFQQSGNNEEALRVFVRMNREG 687

Query: 496  FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
               N  T  S + A +      + K++H  + +   +S   V N+LI  YAK G+I  + 
Sbjct: 688  IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAE 747

Query: 556  TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
              F  +S+K+ ++WN++I  Y  HGF   ALD FDQM    ++PN  T + ++ A S  G
Sbjct: 748  KQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIG 807

Query: 616  MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
            +VD G   F S+   Y + P  EHY  ++D+  R+G L  A EFI++MPI+PD+ +W  L
Sbjct: 808  LVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTL 867

Query: 676  LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
            L+AC +H N+++   A   L +LEP D     L+  +YA+  K +     R+  +E   +
Sbjct: 868  LSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVK 927

Query: 736  NSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC--------- 786
               GQ WIEVKN +++F  G  +   +D ++ + Q    ++T R+S  G           
Sbjct: 928  KEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQ----DLTKRASEIGYVQDCFSLLNE 983

Query: 787  IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
            ++ E+K+ I  IHSEKLA++F L+ S  A   I ++KN+R+C  CH   K+VS + + EI
Sbjct: 984  LQHEQKDPIIFIHSEKLAISFGLL-SLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREI 1042

Query: 847  FLADSKCLHHFKNGQCSCGDYW 868
             + D+   HHF+ G CSC DYW
Sbjct: 1043 IVRDAYRFHHFEGGACSCKDYW 1064



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 200/745 (26%), Positives = 337/745 (45%), Gaps = 89/745 (11%)

Query: 22  PRFRDTHLDF--LCGNGRLN-EAITV------------LDSIATQGAKVRRNTYINLLQA 66
           PR   T   F  LCG  R +  AI+V            +DS+  +G +    T   LL+ 
Sbjct: 34  PRKLKTRTVFPTLCGTRRASFAAISVYISEDESFQEKRIDSVENRGIRPNHQTLKWLLEG 93

Query: 67  CIDSN-SIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYT 124
           C+ +N S+   RKLH+  L L  + +  +  KL   Y   G L  A +VF++M ER ++T
Sbjct: 94  CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFT 153

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC-GNCGDFEAGKLMHSLV 183
           W+ MI   +      EV  LF  MV + + P++  F  +L+AC G    F+  + +H+ +
Sbjct: 154 WNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARI 213

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
           +  G+     V N ++ +Y + G +  ARR F+ +  KD  +W +MISG  +     EA 
Sbjct: 214 LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 273

Query: 244 RLFDKM------------------CR--EEIKLG---------------VVTFNILIRSY 268
           RLF  M                  C+  E +++G                   N L+  Y
Sbjct: 274 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLY 333

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
             LG    A  +   M       D  T+  +I+G +Q G   +A++LFK M   G+ P+ 
Sbjct: 334 FHLGNLISAEHIFSNMSQ----RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            T+ S + AC+    L  G ++H+   K+GF  +  +  +L+N+Y+KC ++E A   F  
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
            + ++V  WN M+  Y        ++ +F +MQ  ++ PN  T+  ++   I+ G+ +  
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509

Query: 449 ----------------------VDLFQRMGKNDK--------VKRNTASWNSLIAGYQQL 478
                                 +D++ ++GK D           ++  SW ++IAGY Q 
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 569

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
              + AL  FR+M       + V + + + ACA L A  + ++IH         S LP  
Sbjct: 570 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 629

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           N+L+  Y++ G I  S   F+   + D I WN+L+ G+   G    AL +F +M   G+ 
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 689

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
            N  TF S + A S    +  GK+V   IT+        E  +A+I +Y + G + +A +
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEK 748

Query: 659 FIEDMPIEPDSSIWEALLTACRIHG 683
              ++  + + S W A++ A   HG
Sbjct: 749 QFLEVSTKNEVS-WNAIINAYSKHG 772


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 262/781 (33%), Positives = 398/781 (50%), Gaps = 86/781 (11%)

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           +LQ C      E GK +HS++I  G+S    +   ++ +YV CG L+  R+ F+ +    
Sbjct: 100 VLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 159

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV----TFNILIRSYNQLGQCDVAM 278
              WN ++S Y +IG   E+  LF KM     KLGVV    TF  +++ +  LG+     
Sbjct: 160 VFLWNLLMSEYAKIGNFRESVSLFKKM----QKLGVVGNCYTFTCVLKCFAALGKVKECK 215

Query: 279 EMVKRMESLGI-------------------------------TPDVFTWTCMISGFAQNG 307
            +   +  LG                                 PDV +W  MI+G   NG
Sbjct: 216 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 275

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
            +   L++F +M  +GV  +  T+ S + AC ++  L++G  +H   VK  F+++V+  N
Sbjct: 276 FSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSN 335

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           +L++MYSKC  L  A  VF  + D  + SW S+IA Y + G    A  LF +MQ   V P
Sbjct: 336 TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRP 395

Query: 428 NVIT-----------------------------------WNVLISGYIQNGNEDEAVDLF 452
           ++ T                                    N LI+ Y + G+ +EA  +F
Sbjct: 396 DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVF 455

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
            ++   D V     SWN++I GY Q    N AL +F  MQ   F P+ +T+  VLPACA 
Sbjct: 456 SKIPVKDIV-----SWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAG 509

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 572
           L A +K +EIHG +LRR   S L V  +L+D YAK G +V ++ +FD +  KD+I+W  +
Sbjct: 510 LAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVM 569

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQ 632
           I GY +HGF + A+  F++M+  G++P+  +F +I+ A S +G+++ G K F S+     
Sbjct: 570 IAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECG 629

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAI 692
           + P +EHY+ ++DL  R G L +A +FIE MPI+PD++IW  LL+ CRIH ++ LA    
Sbjct: 630 VEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVA 689

Query: 693 ERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTF 752
           E +F+LEP +     ++  +YA   K E+  K+RK  ++   + + G  WIEV      F
Sbjct: 690 EHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIF 749

Query: 753 VTGGWSESYS---DLLYSWLQNVPENVTARSSHSGLCIEEE--EKEEISGIHSEKLALAF 807
           V G      +   D+L S L    +N    S    + I E+  EKE I   HSEK A+AF
Sbjct: 750 VAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDDMEKEMIQCGHSEKSAMAF 809

Query: 808 ALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
            ++       T+R+ KN R+C  CHE  K++S     EI L DS   HHFK+G CSC D 
Sbjct: 810 GILNLPPG-RTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRDSNRFHHFKDGLCSCRDA 868

Query: 868 W 868
           +
Sbjct: 869 F 869



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 176/665 (26%), Positives = 306/665 (46%), Gaps = 76/665 (11%)

Query: 17  TKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA 76
           T  S  + ++  ++  C  G L  AI +L    ++  ++  N+Y ++LQ C +  S+   
Sbjct: 56  TTHSVTQNQNAKINKFCEMGDLRNAIELLTK--SKSYELGLNSYCSVLQLCAEKKSLEDG 113

Query: 77  RKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           +++H+  ++    +D  +  KL+ +Y  CG L   R++F+ +    ++ W+ ++  Y++ 
Sbjct: 114 KRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKI 173

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
             +RE V LF  M + G+  + + F  +L+     G  +  K +H  V+KLG      V 
Sbjct: 174 GNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVV 233

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------ 249
           NS++A Y K G +  A   F+ + E D V+WNSMI+G    G +     +F +M      
Sbjct: 234 NSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVE 293

Query: 250 ------------CRE--EIKLG---------------VVTFNILIRSYNQLGQCDVAMEM 280
                       C     + LG               VV  N L+  Y++ G  + A E+
Sbjct: 294 VDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEV 353

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
             +M    I     +WT +I+ + + G  S A+ LF EM   GV P+  T+TS + AC  
Sbjct: 354 FVKMGDTTIV----SWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACAC 409

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
             +L  G ++HS  +K G   ++ V N+LINMY+KC  +E A  VF  I  KD+ SWN+M
Sbjct: 410 SSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTM 469

Query: 401 IAGYCQAGYCGKAYELFIKMQESDVPPNV--------------------ITWNVLISGYI 440
           I GY Q     +A ELF+ MQ+   P ++                    I  ++L  GY 
Sbjct: 470 IGGYSQNLLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF 529

Query: 441 QNGNEDEA-VDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            + +   A VD++ + G         +   K++  SW  +IAGY   G  N A+  F +M
Sbjct: 530 SDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEM 589

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGN 550
           + +   P+  +  ++L AC++    N+  +    +     +E  L     ++D  A+ GN
Sbjct: 590 RIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGN 649

Query: 551 IVYSRTIFDGMSSK-DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
           +  +    + M  K D   W  L+ G  +H     A  + + +  F L+P+   +  ++L
Sbjct: 650 LSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHI--FELEPDNTRYY-VVL 706

Query: 610 AHSLA 614
           A+  A
Sbjct: 707 ANVYA 711



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 107/248 (43%), Gaps = 16/248 (6%)

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
           T + N+ I  + ++G   NA+ +  K +S     N  +  SVL  CA   +    K +H 
Sbjct: 61  TQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHS 118

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
            ++   +     +   L+  Y   G++V  R IFD + +  +  WN L+  Y   G +  
Sbjct: 119 VIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRE 178

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMI 644
           ++ LF +M+  G+  N  TF  ++   +  G V   K+V   + +           +++I
Sbjct: 179 SVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLK-LGFGSNTAVVNSLI 237

Query: 645 DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVL 704
             Y + G +E A    +++  EPD   W +++  C ++G            F     ++ 
Sbjct: 238 AAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVNG------------FSGNGLEIF 284

Query: 705 IQRLILQI 712
           IQ LIL +
Sbjct: 285 IQMLILGV 292


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 268/832 (32%), Positives = 428/832 (51%), Gaps = 94/832 (11%)

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           W  ++ +  R    RE V  +  M+  G+ PD++ FP +L+A  +  D E GK +H+ V 
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 185 KLGMSCVR-RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
           K G       V N+++ +Y KCG      + F+ + E++ V+WNS+IS      + + A 
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184

Query: 244 RLFDKMCREEIK------LGVVT-------------------------------FNILIR 266
             F  M  E ++      + VVT                                N L+ 
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            Y +LG+   +  +   + S G   D+ TW  ++S   QN +  +AL+  +EM   GV P
Sbjct: 245 MYGKLGKLASSKVL---LGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD-VLVGNSLINMYSKCEELEAAERV 385
           +  TI+S + AC+ L+ L  G E+H+ A+K G  D+   VG++L++MY  C+++ +  RV
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES-DVPPNVITWNVLISGYIQNG- 443
           FD + D+ +  WN+MIAGY Q  +  +A  LFI M+ES  +  N  T   ++   +++G 
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420

Query: 444 -NEDEAV--------------------DLFQRMGKNDKV--------KRNTASWNSLIAG 474
            +  EA+                    D++ R+GK D           R+  +WN++I G
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480

Query: 475 YQQLGQKNNALGVFRKMQS-----------SCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           Y       +AL +  KMQ+               PN +T++++LP+CA L A  K KEIH
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
              ++ +L + + V ++L+D YAK G +  SR +FD +  K++ITWN +I  Y +HG   
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            A+DL   M   G+KPN  TF+S+  A S +GMVD G ++F  +   Y + P  +HY+ +
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPD-SSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           +DL GR+G+++EA + +  MP + + +  W +LL A RIH N+++  +A + L  LEP  
Sbjct: 661 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 720

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYS 762
                L+  IY+  G  + A +VR+  +E   R   G  WIE  + V+ FV G  S   S
Sbjct: 721 ASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQS 780

Query: 763 DLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
           + L  +L+ +      E     +S     +EE+EKE +   HSEKLA+AF ++ +S  P 
Sbjct: 781 EKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTS--PG 838

Query: 818 T-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           T IR+ KN+R+C  CH   K++S +   EI L D +  H FKNG CSCGDYW
Sbjct: 839 TIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 232/484 (47%), Gaps = 55/484 (11%)

Query: 59  TYINLLQACID---SNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           T ++++ AC +      + + +++HA+     E++ F+   L+++Y K G L  ++ +  
Sbjct: 201 TLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLG 260

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
               R+L TW+ ++ +  ++++  E +E    MV +G+ PD+F    +L AC +      
Sbjct: 261 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 320

Query: 176 GKLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
           GK +H+  +K G +     V ++++ +Y  C +++  RR F+ M ++    WN+MI+GY 
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380

Query: 235 QIGENDEAHRLFDKM--------------------------CREEIKLGVVTF------- 261
           Q   + EA  LF  M                           R+E   G V         
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 440

Query: 262 ---NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
              N L+  Y++LG+ D+AM +  +ME      D+ TW  MI+G+  +     AL L  +
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMED----RDLVTWNTMITGYVFSEHHEDALLLLHK 496

Query: 319 M-----------SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
           M           S V + PN +T+ + + +C  L ALA G EIH+ A+K     DV VG+
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           +L++MY+KC  L+ + +VFD I  K+V +WN +I  Y   G   +A +L   M    V P
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           N +T+  + +    +G  DE + +F  M  +  V+ ++  +  ++    + G+   A  +
Sbjct: 617 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 676

Query: 488 FRKM 491
              M
Sbjct: 677 MNMM 680



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 126/542 (23%), Positives = 235/542 (43%), Gaps = 68/542 (12%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-- 83
           +T L  LC N +L EA+  L  +  +G +    T  ++L AC     +   ++LHA+   
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330

Query: 84  NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
           N   + + FV + L+ +Y  C  +   R VF+ M +R +  W+AMI  YS+++  +E + 
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390

Query: 144 LFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
           LF  M +  GL  +      ++ AC   G F   + +H  V+K G+   R V+N+++ +Y
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 450

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-----------CR 251
            + GK+  A R F  M+++D V WN+MI+GY     +++A  L  KM            R
Sbjct: 451 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASR 510

Query: 252 EEIKLGVVTFNILIRSYNQLG-----------------QCDVA--------------MEM 280
             +K   +T   ++ S   L                    DVA              ++M
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 570

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
            +++       +V TW  +I  +  +G   +A+DL + M   GV PN VT  S  +AC+ 
Sbjct: 571 SRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 630

Query: 341 LKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD--KDVYSW 397
              +  G+ I + +    G          ++++  +   ++ A ++ +M+        +W
Sbjct: 631 SGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAW 690

Query: 398 NSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-YIQNGNEDEAVDLFQ 453
           +S++     +        A +  I+++     PNV +  VL++  Y   G  D+A ++ +
Sbjct: 691 SSLLGASRIHNNLEIGEIAAQNLIQLE-----PNVASHYVLLANIYSSAGLWDKATEVRR 745

Query: 454 RMGKNDKVKRNTASW-------NSLIAGYQQLGQKNNALG----VFRKMQSSCFYPNCVT 502
            M +    K    SW       +  +AG     Q     G    ++ +M+   + P+   
Sbjct: 746 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSC 805

Query: 503 IL 504
           +L
Sbjct: 806 VL 807


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 254/761 (33%), Positives = 395/761 (51%), Gaps = 85/761 (11%)

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
            +IK G       +  V++++ K G    A R FE ++ K  V ++ M+ GY +     +
Sbjct: 69  FIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGD 128

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRS---------------------------------- 267
           A   F +M  +E++L V  +  L++                                   
Sbjct: 129 ALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMS 188

Query: 268 -YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            Y +  Q D A +M +RM+      D+ +WT +++G+AQNG   +AL L  +M   G  P
Sbjct: 189 LYAKCRQIDNAYKMFERMQH----KDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKP 244

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           + VT+ S + A  D+KAL +G  IH  A + GF   V V N+L++MY KC     A  VF
Sbjct: 245 DSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVF 304

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM-QESDVP------------------- 426
             ++ K V SWN+MI G  Q G   +A+  F+KM  E +VP                   
Sbjct: 305 KGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLE 364

Query: 427 ---------------PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                           NV   N LIS Y +    D A  +F  + K +       +WN++
Sbjct: 365 RGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTN------VTWNAM 418

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           I GY Q G    AL +F  MQS     +C T++ V+ A A    + + K IHG  +R  +
Sbjct: 419 ILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACM 478

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
           ++++ V  +L+D YAK G I  +R +FD M  + +ITWN++I GY  HG     LDLF++
Sbjct: 479 DNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNE 538

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           M+   +KPN  TFLS+I A S +G V+ G  +F S+ E Y + P ++HYSAM+DL GR+G
Sbjct: 539 MQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAG 598

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
           +L++A  FI++MPI+P  S+  A+L AC+IH N++L   A ++LF L+P +     L+  
Sbjct: 599 QLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVLLAN 658

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN 771
           IYA     +   KVR    +     + G  W+E++N ++TF +G  +   S  +Y++L+ 
Sbjct: 659 IYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSGSTNHPESKKIYAFLET 718

Query: 772 VPENVTARS----SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRM 827
           + + + A        S   +EE+ K+++   HSE+LA+AF L+ +S    T+ I KN+R+
Sbjct: 719 LGDEIKAAGYVPDPDSIHDVEEDVKKQLLSSHSERLAIAFGLLNTSPGT-TLHIRKNLRV 777

Query: 828 CVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           C  CH+T KY+S++   EI + D +  HHFKNG CSCGDYW
Sbjct: 778 CGDCHDTTKYISLVTGREIIVRDLRRFHHFKNGSCSCGDYW 818



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 251/514 (48%), Gaps = 48/514 (9%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT---EIDV 91
           N  L +A+     +     ++    Y  LLQ C ++  +   R++H  +  +T   E ++
Sbjct: 123 NSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLI--ITNGFESNL 180

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV T ++S+YAKC  +D+A ++FE M+ ++L +W+ ++  Y+++   +  ++L   M + 
Sbjct: 181 FVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEA 240

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G  PD      IL A  +      G+ +H    + G   +  V N++L +Y KCG    A
Sbjct: 241 GQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIA 300

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE------------------- 252
           R  F+ M  K  V+WN+MI G  Q GE++EA   F KM  E                   
Sbjct: 301 RLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANL 360

Query: 253 --------------EIKL--GVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                         ++KL   V   N LI  Y++  + D+A  +   +E   +     TW
Sbjct: 361 GDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-----TW 415

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             MI G+AQNG   +AL+LF  M   G+  +  T+   I+A  D         IH LAV+
Sbjct: 416 NAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVR 475

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
               ++V V  +L++MY+KC  ++ A ++FDM++++ V +WN+MI GY   G   +  +L
Sbjct: 476 ACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDL 535

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F +MQ+  V PN IT+  +IS    +G  +E + LF+ M ++  ++     +++++    
Sbjct: 536 FNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLG 595

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           + GQ ++A    ++M      P    + ++L AC
Sbjct: 596 RAGQLDDAWNFIQEMP---IKPGISVLGAMLGAC 626



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 159/600 (26%), Positives = 262/600 (43%), Gaps = 99/600 (16%)

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           +TK++S++ K G   +A  VFE +  +    +  M+  Y+++    + +  F  M+ D +
Sbjct: 82  QTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEV 141

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
                 +  +LQ CG   D + G+ +H L+I  G      V  +V+++Y KC ++  A +
Sbjct: 142 RLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYK 201

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------ 261
            FE M  KD V+W ++++GY Q G    A +L  +M     K   VT             
Sbjct: 202 MFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKA 261

Query: 262 -----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
                                  N L+  Y + G   +A  + K M S      V +W  
Sbjct: 262 LRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRS----KTVVSWNT 317

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           MI G AQNG + +A   F +M   G +P  VT+   + AC +L  L  G  +H L  K+ 
Sbjct: 318 MIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLK 377

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              +V V NSLI+MYSKC+ ++ A  +F+ ++  +V +WN+MI GY Q G   +A  LF 
Sbjct: 378 LDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGCVKEALNLFC 436

Query: 419 KMQESDVP-----------------------------------PNVITWNVLISGYIQNG 443
            MQ   +                                     NV     L+  Y + G
Sbjct: 437 MMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCG 496

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
               A  LF  M      +R+  +WN++I GY   G     L +F +MQ     PN +T 
Sbjct: 497 AIKTARKLFDMMQ-----ERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITF 551

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRS------LESSLPVMNSLIDTYAKSGNIVYSRTI 557
           LSV+ AC++   S  V+E  G +L +S      LE ++   ++++D   ++G +  +   
Sbjct: 552 LSVISACSH---SGFVEE--GLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNF 606

Query: 558 FDGMSSKDIITWNSLICGYVLHGF-WHAALDLFDQ--MKSFGLKPNRGTFLSIILAHSLA 614
              M  K  I+    + G +L     H  ++L ++   K F L P+ G +  ++LA+  A
Sbjct: 607 IQEMPIKPGIS----VLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGY-HVLLANIYA 661



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 174/372 (46%), Gaps = 7/372 (1%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN- 84
           +T +D    NG   EA      +  +G    R T + +L AC +   +     +H  L+ 
Sbjct: 316 NTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDK 375

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
           L  + +V V   L+S+Y+KC  +D A  +F ++ + N+ TW+AMI  Y+++   +E + L
Sbjct: 376 LKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTNV-TWNAMILGYAQNGCVKEALNL 434

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           F +M   G+  D F    ++ A  +       K +H L ++  M     V  +++ +Y K
Sbjct: 435 FCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAK 494

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
           CG +  AR+ F+ M E+  + WN+MI GY   G   E   LF++M +  +K   +TF  +
Sbjct: 495 CGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSV 554

Query: 265 IRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           I + +  G  +  + + K M E   + P +  ++ M+    + G+   A +  +EM    
Sbjct: 555 ISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMP--- 611

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           + P    + + + AC   K + +G +      K+   D+      L N+Y+     +   
Sbjct: 612 IKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLD-PDEGGYHVLLANIYASNSMWDKVA 670

Query: 384 RVFDMIKDKDVY 395
           +V   ++DK ++
Sbjct: 671 KVRTAMEDKGLH 682


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  414 bits (1064), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 250/778 (32%), Positives = 404/778 (51%), Gaps = 78/778 (10%)

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           +LQ C +    + GK + + +   G      + + +  +Y  CG L  A R F+ +  + 
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEK 159

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY-------------- 268
            + WN +++   + G+   +  LF KM    +++   TF+ + +S+              
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHG 219

Query: 269 ----------NQLGQCDVA-------MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQ 311
                     N +G   VA       ++  +++       DV +W  +I+G+  NG   +
Sbjct: 220 YILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
            L +F +M F G+  +  TI S  + C D + +++G  +H   VK  F+ +    N+L++
Sbjct: 280 GLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLD 339

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MYSKC +L++A+ VF  +  + V S+ SMIAGY + G  G+A +LF +M+E  + P+V T
Sbjct: 340 MYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399

Query: 432 ----------------------W-------------NVLISGYIQNGNEDEAVDLFQRMG 456
                                 W             N L+  Y + G+  EA  +F  M 
Sbjct: 400 VTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMR 459

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM-QSSCFYPNCVTILSVLPACAYLVA 515
             D +     SWN++I GY +    N AL +F  +     F P+  T+  VLPACA L A
Sbjct: 460 VKDII-----SWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSA 514

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
            +K +EIHG ++R    S   V NSL+D YAK G ++ +R +FD ++SKD+++W  +I G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAG 574

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
           Y +HGF   A+ LF+QM+  G++P+  +F+S++ A S +G+VD G + F  +    +I P
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
            +EHY+ ++D+  R+G L +A  FIE+MPI PD++IW ALL  CRIH ++ LA    E++
Sbjct: 635 TVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKV 694

Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
           F+LEP +     L+  IYA   K E+  ++RK   +   R + G  WIE+K  V  FV G
Sbjct: 695 FELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAG 754

Query: 756 GWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALI 810
             S   ++ + ++L+ V      E  +  + ++ +  EE EKEE    HSEKLA+A  +I
Sbjct: 755 DSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGII 814

Query: 811 GSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            S      IR+ KN+R+C  CHE AK++S +   EI L DS   H FK+G CSC  +W
Sbjct: 815 SSGHGK-IIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 208/474 (43%), Gaps = 46/474 (9%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF--LNLVTEIDVF 92
           NG   + ++V   +   G ++   T +++   C DS  I L R +H F      +  D F
Sbjct: 274 NGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRF 333

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
             T LL +Y+KCG LD A+ VF +M  R++ ++++MI  Y+R+    E V+LF  M ++G
Sbjct: 334 CNT-LLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + PD +    +L  C      + GK +H  + +  M     V N+++ +Y KCG +  A 
Sbjct: 393 ISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAE 452

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD------KMCREEIKLGVV------- 259
             F  M  KD ++WN++I GY +    +EA  LF+      +   +E  +  V       
Sbjct: 453 LVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASL 512

Query: 260 -----------------------TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                                    N L+  Y + G   +A  +   + S     D+ +W
Sbjct: 513 SAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITS----KDLVSW 568

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           T MI+G+  +G   +A+ LF +M   G+ P+ ++  S + AC+    +  G    ++   
Sbjct: 569 TVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRH 628

Query: 357 MGFTDDVLVGNS-LINMYSKCEELEAAER-VFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
               +  +   + +++M ++   L  A R + +M    D   W +++ G C+  +  K  
Sbjct: 629 ECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCG-CRIHHDVKLA 687

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           E   +      P N   + ++ + Y +    +E   L +R+G+    K    SW
Sbjct: 688 ERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSW 741


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 257/819 (31%), Positives = 408/819 (49%), Gaps = 82/819 (10%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+ +Y+K G +  AR VFE++  R+  +W AM+  Y+++    E + L+  M + G+ P 
Sbjct: 83  LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPT 142

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            ++   +L +C     F  G+L+H+   K G      V N+V+ +Y++CG    A R F 
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFC 202

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            M  +D V +N++ISG+ Q G  + A  +F++M    +    VT + L+ +   LG    
Sbjct: 203 DMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQK 262

Query: 277 AMEMVKRMESLGITPD-------------------------------VFTWTCMISGFAQ 305
             ++   +   GI+ D                               V  W  M+  F Q
Sbjct: 263 GTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
               +++ +LF +M   G+ PN  T    +  CT  + + +G +IHSL+VK GF  D+ V
Sbjct: 323 INDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYV 382

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
              LI+MYSK   LE A RV +M+K+KDV SW SMIAGY Q   C  A   F +MQ+  +
Sbjct: 383 SGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGI 442

Query: 426 PPN-----------------------------------VITWNVLISGYIQNGNEDEAVD 450
            P+                                   V  WN L++ Y + G   EA  
Sbjct: 443 WPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFS 502

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            F+ M   D +     + N L++G+ Q G    AL VF +M  S    N  T +S L A 
Sbjct: 503 SFEEMELKDGI-----TGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSAS 557

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
           A L    + K+IH  V++        V N+LI  Y K G+   ++  F  MS ++ ++WN
Sbjct: 558 ANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWN 617

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC 630
           ++I     HG    ALDLFDQMK  G+KPN  TF+ ++ A S  G+V+ G   F S+++ 
Sbjct: 618 TIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDE 677

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
           Y I P  +HY+ +ID++GR+G+L+ A +FIE+MPI  D+ +W  LL+AC++H NI++   
Sbjct: 678 YGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEF 737

Query: 691 AIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVY 750
           A + L +LEP D     L+   YA+  K  +  +VRK+ R+   R   G+ WIEVKN+V+
Sbjct: 738 AAKHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVH 797

Query: 751 TFVTGGWSESYSDLLYSWLQNVPENVTA-----RSSHSGLCIEEEEKEEISGIHSEKLAL 805
            F  G      ++ +Y++L  + + V          H     E+E ++    +HSEKLA+
Sbjct: 798 AFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLVHSEKLAV 857

Query: 806 AFALIGSSQAP-HTIRIVKNIRMCVHCHETAKYVSMMHH 843
            F L+  S  P   +R++KN+R+  +   T+ Y + +H 
Sbjct: 858 TFGLM--SLPPCMPLRVIKNLRVEKY---TSLYANFLHQ 891



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 177/621 (28%), Positives = 297/621 (47%), Gaps = 78/621 (12%)

Query: 152 GLFPDDFLFPKILQAC-GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           GL P DF     L+AC GN   ++    +H+  +  G+   R V N ++ +Y K G ++ 
Sbjct: 38  GLGPLDFACA--LRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLP 95

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           ARR FE +  +D V+W +M+SGY Q G  +EA  L+ +M R  +       + ++ S  +
Sbjct: 96  ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTK 155

Query: 271 L----------------GQC------DVAMEMVKRMESLGITPDVF---------TWTCM 299
                            G C      +  + +  R  S  +   VF         T+  +
Sbjct: 156 AELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTL 215

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           ISG AQ G    AL++F+EM F G+ P+ VTI+S ++AC  L  L  G ++HS   K G 
Sbjct: 216 ISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGI 275

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
           + D ++  SL+++Y KC ++E A  +F+     +V  WN M+  + Q     K++ELF +
Sbjct: 276 SSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQ 335

Query: 420 MQESDVPPNVITWNVLI----------------SGYIQNGNEDEA------VDLFQRMGK 457
           MQ + + PN  T+  ++                S  ++ G E +       +D++ + G 
Sbjct: 336 MQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGW 395

Query: 458 NDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
            +K +R        +  SW S+IAGY Q     +AL  F++MQ    +P+ + + S +  
Sbjct: 396 LEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISG 455

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           CA + A  +  +IH  +        + + N+L++ YA+ G I  + + F+ M  KD IT 
Sbjct: 456 CAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITG 515

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
           N L+ G+   G    AL +F +M   G+K N  TF+S + A +    +  GK++   + +
Sbjct: 516 NGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIK 575

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEA-MEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
                   E  +A+I LYG+ G  E+A MEF E    E +   W  ++T+C  HG     
Sbjct: 576 TGHSFE-TEVGNALISLYGKCGSFEDAKMEFSEMS--ERNEVSWNTIITSCSQHGR---G 629

Query: 689 VLAIERLFD------LEPGDV 703
           + A++ LFD      ++P DV
Sbjct: 630 LEALD-LFDQMKKEGIKPNDV 649



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 164/625 (26%), Positives = 282/625 (45%), Gaps = 96/625 (15%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA---FLNLVTEIDV 91
           NG   EA+ +   +   G         ++L +C  +      R +HA        +EI  
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEI-- 178

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV   ++++Y +CG    A  VF DM  R+  T++ +I  +++       +E+F  M   
Sbjct: 179 FVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFS 238

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           GL PD      +L AC + GD + G  +HS + K G+S    +  S+L +YVKCG +  A
Sbjct: 239 GLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETA 298

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--------------------CR 251
              F S D  + V WN M+  + QI +  ++  LF +M                    C 
Sbjct: 299 LVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCT 358

Query: 252 EEIKLG---------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
            EI LG               +    +LI  Y++ G     +E  +R+  +    DV +W
Sbjct: 359 REIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGW----LEKARRVLEMLKEKDVVSW 414

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           T MI+G+ Q+     AL  FKEM   G+ P+ + + SAIS C  + A+  G++IH+    
Sbjct: 415 TSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYV 474

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G++ DV + N+L+N+Y++C  +  A   F+ ++ KD  + N +++G+ Q+G   +A ++
Sbjct: 475 SGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKV 534

Query: 417 FIKMQESDVPPNVITW-----------------------------------NVLISGYIQ 441
           F++M +S V  NV T+                                   N LIS Y +
Sbjct: 535 FMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGK 594

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G+ ++A   F  M      +RN  SWN++I    Q G+   AL +F +M+     PN V
Sbjct: 595 CGSFEDAKMEFSEMS-----ERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDV 649

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS------LIDTYAKSGNIVYSR 555
           T + VL AC+++     V+E  G    +S+     +         +ID + ++G +  ++
Sbjct: 650 TFIGVLAACSHV---GLVEE--GLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAK 704

Query: 556 TIFDGMS-SKDIITWNSLICGYVLH 579
              + M  + D + W +L+    +H
Sbjct: 705 KFIEEMPIAADAMVWRTLLSACKVH 729



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 199/415 (47%), Gaps = 43/415 (10%)

Query: 300 ISGFAQNGRTSQALDLF--KEMSFVGVMPNGVTITSAISACT-DLKALAMGMEIHSLAVK 356
           ++GF  +   ++ L LF  K     G+ P  +    A+ AC  + +   +  EIH+ AV 
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRWQVVPEIHAKAVT 70

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G     +VGN LI++YSK   +  A RVF+ +  +D  SW +M++GY Q G   +A  L
Sbjct: 71  RGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGL 130

Query: 417 FIKMQESDVPPNVITWNVLIS-----------------GYIQN-------GNEDEAVDLF 452
           + +M  + V P     + ++S                 GY          GN    + L+
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN--AVITLY 188

Query: 453 QRMGKN--------DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            R G          D   R+T ++N+LI+G+ Q G   +AL +F +MQ S   P+CVTI 
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           S+L ACA L    K  ++H  + +  + S   +  SL+D Y K G++  +  IF+     
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           +++ WN ++  +        + +LF QM++ G++PN+ T+  I+   +    +DLG+++ 
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368

Query: 625 C-SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
             S+   ++    +     +ID+Y + G LE+A   +E M  E D   W +++  
Sbjct: 369 SLSVKTGFESDMYVS--GVLIDMYSKYGWLEKARRVLE-MLKEKDVVSWTSMIAG 420



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 44/246 (17%)

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           V EIH   + R L     V N LID Y+K+G ++ +R +F+ +S++D ++W +++ GY  
Sbjct: 61  VPEIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSII-------------LAHSLA----------- 614
           +G    AL L+ QM   G+ P      S++             L H+             
Sbjct: 121 NGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFV 180

Query: 615 -----------GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
                      G   L ++VFC +     +      ++ +I  + + G  E A+E  E+M
Sbjct: 181 GNAVITLYLRCGSFRLAERVFCDMPHRDTVT-----FNTLISGHAQCGHGEHALEIFEEM 235

Query: 664 P---IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE-PGDVLIQRLILQIYAICGKP 719
               + PD     +LL AC   G++         LF      D +++  +L +Y  CG  
Sbjct: 236 QFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDV 295

Query: 720 EDALKV 725
           E AL +
Sbjct: 296 ETALVI 301


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 270/807 (33%), Positives = 417/807 (51%), Gaps = 91/807 (11%)

Query: 139  REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV 198
            R  VEL  +  +  L  D   +  ILQ C      + GK++HS++   G+     +   +
Sbjct: 435  RNAVELLRMSQKSEL--DLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKL 492

Query: 199  LAVYVKCGKLIWARRFFESMDEKDGV-AWNSMISGYFQIGENDEAHRLFDKMCREEI--- 254
            + +YV CG L   RR F+ +   + V  WN M+S Y +IG+  E+  LF KM +  I   
Sbjct: 493  VFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGN 552

Query: 255  ----------------------------KLGVVTFNI----LIRSYNQLGQCDVAMEMVK 282
                                        KLG  ++N     LI +Y + G+ D A ++  
Sbjct: 553  SYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKL-- 610

Query: 283  RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
              + LG   DV +W  MISG   NG +  AL+ F +M  + V  +  T+ ++++AC ++ 
Sbjct: 611  -FDELG-DRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVG 668

Query: 343  ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
            +L++G  +H   VK  F+ +V+  N+L++MYSKC  L  A + F+ +  K V SW S+IA
Sbjct: 669  SLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIA 728

Query: 403  GYCQAGYCGKAYELFIKMQESDVPPNVITW------------------------------ 432
             Y + G    A  LF +M+   V P+V +                               
Sbjct: 729  AYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMAL 788

Query: 433  -----NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
                 N L+  Y + G+ +EA  +F ++   D V     SWN++I GY +    N AL +
Sbjct: 789  CLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIV-----SWNTMIGGYSKNSLPNEALKL 843

Query: 488  FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
            F +MQ     P+ +T+  +LPAC  L A    + IHGC+LR    S L V N+LID Y K
Sbjct: 844  FAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVK 902

Query: 548  SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
             G++V++R +FD +  KD+ITW  +I G  +HG  + A+  F +M+  G+KP+  TF SI
Sbjct: 903  CGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSI 962

Query: 608  ILAHSLAGMVDLGKKVFCS-ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
            + A S +G+++ G   F S I+EC  + P +EHY+ M+DL  R+G L +A   IE MPI+
Sbjct: 963  LYACSHSGLLNEGWGFFNSMISEC-NMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIK 1021

Query: 667  PDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR 726
            PD++IW ALL  CRIH +++LA    E +F+LEP +     L+  IYA   K E+  K+R
Sbjct: 1022 PDATIWGALLCGCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLR 1081

Query: 727  KLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSS 781
            +   +   + S G  WIEV+    TFV+   +   +  ++S L N+      E  + +  
Sbjct: 1082 ERIGKRGLKKSPGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMR 1141

Query: 782  HSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMM 841
            ++ +   + EKE     HSEKLA+AF ++ +  +  TIR+ KN+R+C  CHE AK++S  
Sbjct: 1142 YALINAGDMEKEVALCGHSEKLAMAFGIL-NLPSGRTIRVAKNLRVCDDCHEMAKFMSKT 1200

Query: 842  HHCEIFLADSKCLHHFKNGQCSCGDYW 868
               EI L DS   HHFK+G CSC D+W
Sbjct: 1201 TRREIILRDSNRFHHFKDGFCSCRDFW 1227



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 165/663 (24%), Positives = 298/663 (44%), Gaps = 87/663 (13%)

Query: 25   RDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN 84
             +T +   C  G L  A+ +L    +Q +++  N Y ++LQ C +   +   + +H+ ++
Sbjct: 421  ENTKICKFCEVGDLRNAVELLR--MSQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVIS 478

Query: 85   L-VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN-LYTWSAMIGAYSRDQRWREVV 142
                 I+  +  KL+ +Y  CG L + R +F+ +   N ++ W+ M+  Y++   +RE +
Sbjct: 479  SNGIPIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESI 538

Query: 143  ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
             LF  M + G+  + + F  IL+     G     K +H  V KLG      V NS++A Y
Sbjct: 539  YLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATY 598

Query: 203  VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF- 261
             K G++  A + F+ + ++D V+WNSMISG    G +  A   F +M    + + + T  
Sbjct: 599  FKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLV 658

Query: 262  ----------------------------------NILIRSYNQLGQCDVAMEMVKRMESL 287
                                              N L+  Y++ G  + A++  ++M   
Sbjct: 659  NSVAACANVGSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQ- 717

Query: 288  GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
                 V +WT +I+ + + G    A+ LF EM   GV P+  ++TS + AC    +L  G
Sbjct: 718  ---KTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKG 774

Query: 348  MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
             ++H+   K      + V N+L++MY+KC  +E A  VF  I  KD+ SWN+MI GY + 
Sbjct: 775  RDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKN 834

Query: 408  GYCGKAYELFIKMQESDVPPNVI----------------------------------TWN 433
                +A +LF +MQ+   P  +                                     N
Sbjct: 835  SLPNEALKLFAEMQKESRPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVAN 894

Query: 434  VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
             LI  Y++ G+   A  LF  + + D +     +W  +I+G    G  N A+  F+KM+ 
Sbjct: 895  ALIDMYVKCGSLVHARLLFDMIPEKDLI-----TWTVMISGCGMHGLGNEAIATFQKMRI 949

Query: 494  SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIV 552
            +   P+ +T  S+L AC++    N+       ++   ++E  L     ++D  A++GN+ 
Sbjct: 950  AGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLS 1009

Query: 553  YSRTIFDGMSSK-DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             +  + + M  K D   W +L+CG  +H     A  + + +  F L+P+   +  ++LA+
Sbjct: 1010 KAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHV--FELEPDNAGYY-VLLAN 1066

Query: 612  SLA 614
              A
Sbjct: 1067 IYA 1069



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 174/359 (48%), Gaps = 7/359 (1%)

Query: 36   GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
            G  ++AI +   + ++G      +  ++L AC   NS+   R +H ++      + + V 
Sbjct: 734  GLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVS 793

Query: 95   TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
              L+ +YAKCG +++A  VF  +  +++ +W+ MIG YS++    E ++LF  M ++   
Sbjct: 794  NALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESR- 852

Query: 155  PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            PD      +L ACG+    E G+ +H  +++ G S    V N+++ +YVKCG L+ AR  
Sbjct: 853  PDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLL 912

Query: 215  FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
            F+ + EKD + W  MISG    G  +EA   F KM    IK   +TF  ++ + +  G  
Sbjct: 913  FDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLL 972

Query: 275  DVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
            +        M S   + P +  + CM+   A+ G  S+A +L + M    + P+     +
Sbjct: 973  NEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMP---IKPDATIWGA 1029

Query: 334  AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
             +  C     + +  ++     ++   D+      L N+Y++ E+ E  +++ + I  +
Sbjct: 1030 LLCGCRIHHDVELAEKVAEHVFELE-PDNAGYYVLLANIYAEAEKWEEVKKLRERIGKR 1087


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 265/815 (32%), Positives = 408/815 (50%), Gaps = 111/815 (13%)

Query: 80  HAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVF--EDMRERNLYTWSAMIGAYSRDQR 137
           H   + + + D+  +T L++ ++  G  + ARE+F    +  R+   ++AMI  YS +  
Sbjct: 70  HHLFDEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNND 129

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACG-NCGDFEAGKLMHSLVIKLGMSCVRRVRN 196
               +ELF  ++++G  PD+F F  +L A      D +  + +H  V+K G   V  V N
Sbjct: 130 GFGAIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLN 189

Query: 197 SVLAVYVKCG---------KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
           ++L+V+VKC           +  AR+ F+ M E+D ++W +MI+GY + GE D A +  D
Sbjct: 190 ALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLD 249

Query: 248 KMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
            M     KL VV +N +I  Y   G    A+EM ++M  LGI  D FT+           
Sbjct: 250 GMTE---KL-VVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTY----------- 294

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM----GFTDDV 363
                                   TS +SAC +      G ++H+  ++          +
Sbjct: 295 ------------------------TSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSL 330

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
            V N+L  +Y KC +++ A +VF+ +  KD+ SWN++++GY  AG   +A   F +M E 
Sbjct: 331 SVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPER 390

Query: 424 DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
               N++TW V+ISG  QNG  +E++ LF R                             
Sbjct: 391 ----NLLTWTVMISGLAQNGFGEESLKLFNR----------------------------- 417

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID 543
                  M+S  F P        + ACA+L A    +++H  ++R   +SSL   N+LI 
Sbjct: 418 -------MKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALIT 470

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGT 603
            YAK G +  +  +F  M   D ++WN++I     HG    AL+LF+ M    + P+R T
Sbjct: 471 MYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRIT 530

Query: 604 FLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
           FL+++   S AG+V+ G + F S++  Y I P  +HY+ MIDL  R+GK  EA + IE M
Sbjct: 531 FLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETM 590

Query: 664 PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDAL 723
           P+EP   IWEALL  CRIHGN+DL + A ERLF+L P       L+  +YA  G+ +D  
Sbjct: 591 PVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVA 650

Query: 724 KVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VP 773
           KVRKL R+   +   G  WIEV+N V+ F+           +Y++L+           +P
Sbjct: 651 KVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIP 710

Query: 774 ENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHE 833
           +  T    H    +E E+KE +   HSEKLA+ F L+       T+R+ KN+R+C  CH 
Sbjct: 711 D--TKFVLHD---MESEQKEYVLSTHSEKLAVGFGLLKLPLGA-TVRVFKNLRICGDCHN 764

Query: 834 TAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             K++S +   EI + D K  HHFKNG+CSCG+YW
Sbjct: 765 AFKFMSKVVEREIVVRDGKRFHHFKNGECSCGNYW 799



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 191/384 (49%), Gaps = 46/384 (11%)

Query: 76  ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           ARKL    + +TE D    T +++ Y + G LD AR+  + M E+ +  W+AMI  Y   
Sbjct: 213 ARKL---FDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHH 269

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL----GMSCV 191
             + E +E+F  M   G+  D+F +  +L AC N G F  GK +H+ +++      +   
Sbjct: 270 GFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFS 329

Query: 192 RRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR 251
             V N++  +Y KCGK+  AR+ F  M  KD V+WN+++SGY   G  DEA   F++M  
Sbjct: 330 LSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPE 389

Query: 252 EEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQ 311
             +    +T+ ++I    Q G  + ++++  RM+S G  P      C             
Sbjct: 390 RNL----LTWTVMISGLAQNGFGEESLKLFNRMKSEGFEP------C------------- 426

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
                 + +F G          AI AC  L AL  G ++H+  V++GF   +  GN+LI 
Sbjct: 427 ------DYAFAG----------AIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALIT 470

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MY+KC  +EAA  +F  +   D  SWN+MIA   Q G+  +A ELF  M + D+ P+ IT
Sbjct: 471 MYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRIT 530

Query: 432 WNVLISGYIQNGNEDEAVDLFQRM 455
           +  ++S     G  +E    F+ M
Sbjct: 531 FLTVLSTCSHAGLVEEGHRYFKSM 554



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 146/548 (26%), Positives = 238/548 (43%), Gaps = 113/548 (20%)

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVK 282
           G   N +I  Y +  +   AH LFD++ + +I    V    LI +++  G  ++A E+  
Sbjct: 50  GYILNRLIDVYCKSSDLVSAHHLFDEIRQPDI----VARTTLIAAHSSAGNSNLAREIF- 104

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
               LGI  D   +  MI+G++ N     A++LF+++   G  P+  T TS       L 
Sbjct: 105 FATPLGIR-DTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSV------LG 157

Query: 343 ALAMGME-------IHSLAVK--MGFTDDVLVGNSLINMYSKCE---------ELEAAER 384
           ALA+ +E       IH   VK   GF   VL  N+L++++ KC           + AA +
Sbjct: 158 ALALIVEDEKQCQQIHCAVVKSGSGFVTSVL--NALLSVFVKCASSPLVSSSSLMAAARK 215

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           +FD + ++D  SW +MIAGY + G    A +    M E      V+ WN +ISGY+ +G 
Sbjct: 216 LFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEK----LVVAWNAMISGYVHHGF 271

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
             EA+++F++M                + G Q                      +  T  
Sbjct: 272 FLEALEMFRKM---------------YLLGIQW---------------------DEFTYT 295

Query: 505 SVLPACAYLVASNKVKEIHGCVLRR----SLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           SVL ACA        K++H  +LR     SL+ SL V N+L   Y K G +  +R +F+ 
Sbjct: 296 SVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQ 355

Query: 561 MSSKDIITWNSLICGYV-------------------------------LHGFWHAALDLF 589
           M  KD+++WN+++ GYV                                +GF   +L LF
Sbjct: 356 MPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLF 415

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
           ++MKS G +P    F   I+A +    +  G+++   +         +   +A+I +Y +
Sbjct: 416 NRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRL-GFDSSLSAGNALITMYAK 474

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL- 708
            G +E A      MP   DS  W A++ A   HG+      A+E    +   D+L  R+ 
Sbjct: 475 CGVVEAAHCLFLTMPY-LDSVSWNAMIAALGQHGH---GAQALELFELMLKEDILPDRIT 530

Query: 709 ILQIYAIC 716
            L + + C
Sbjct: 531 FLTVLSTC 538



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 177/399 (44%), Gaps = 45/399 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTE------ 88
           +G   EA+ +   +   G +    TY ++L AC ++      +++HA++ L TE      
Sbjct: 269 HGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYI-LRTEPRPSLD 327

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREV-------------------------------FEDM 117
             + V   L ++Y KCG +D+AR+V                               FE+M
Sbjct: 328 FSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEM 387

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            ERNL TW+ MI   +++    E ++LF  M  +G  P D+ F   + AC        G+
Sbjct: 388 PERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGR 447

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H+ +++LG        N+++ +Y KCG +  A   F +M   D V+WN+MI+   Q G
Sbjct: 448 QLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHG 507

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTW 296
              +A  LF+ M +E+I    +TF  ++ + +  G  +      K M  L GI P    +
Sbjct: 508 HGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHY 567

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAV 355
             MI    + G+ S+A D+ + M    V P      + ++ C     + +G++    L  
Sbjct: 568 ARMIDLLCRAGKFSEAKDMIETMP---VEPGPPIWEALLAGCRIHGNMDLGIQAAERLFE 624

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
            M   D   V   L NMY+     +   +V  +++DK V
Sbjct: 625 LMPQHDGTYV--LLSNMYATVGRWDDVAKVRKLMRDKGV 661



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 184/396 (46%), Gaps = 38/396 (9%)

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H+  +  GF     + N LI++Y K  +L +A  +FD I+  D+ +  ++IA +  AG 
Sbjct: 37  VHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSAGN 96

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
              A E+F          + + +N +I+GY  N +   A++LF+ + +N   + +  ++ 
Sbjct: 97  SNLAREIFFATPLG--IRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNG-FRPDNFTFT 153

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI--------------LSVLPACAYLVA 515
           S++           AL +  + +  C   +C  +              LSV   CA    
Sbjct: 154 SVLG----------ALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPL 203

Query: 516 SNKVKEIHGC--VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
            +    +     +     E       ++I  Y ++G +  +R   DGM+ K ++ WN++I
Sbjct: 204 VSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMI 263

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
            GYV HGF+  AL++F +M   G++ +  T+ S++ A + AG    GK+V   I    + 
Sbjct: 264 SGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRT-EP 322

Query: 634 IPMIEHY----SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            P ++      +A+  LY + GK++EA +    MP++ D   W A+L+     G ID A 
Sbjct: 323 RPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK-DLVSWNAILSGYVNAGRIDEAK 381

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
              E   ++   ++L   +++   A  G  E++LK+
Sbjct: 382 SFFE---EMPERNLLTWTVMISGLAQNGFGEESLKL 414


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 260/875 (29%), Positives = 436/875 (49%), Gaps = 71/875 (8%)

Query: 62  NLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE- 119
           +LL+    + +    R +H+ +      + V    KL+S YA+      +  VF  +   
Sbjct: 24  SLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT 83

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
            N+Y W+++I A + +  + + +  +  M +  L PD F FP ++ +C    D E G ++
Sbjct: 84  NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIV 143

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H   +++G      + N+++ +Y +   L  AR  FE M  +D V+WNS+ISGY   G  
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF----- 294
           ++A  ++ K     +     T + ++ +   L      + +   +E +GI  DV      
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGL 263

Query: 295 --------------------------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
                                     TW  MI G+AQ GR   ++ LF +M   G +P+ 
Sbjct: 264 LSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDM 322

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
           ++ITS I AC     L +G  +H   +  GF  D +  N LI+MY+KC +L AA+ VFD 
Sbjct: 323 LSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDT 382

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY--------- 439
            K KD  +WNS+I GY Q+GY  +  E F KM + +  P+ +T+ +L+S +         
Sbjct: 383 TKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQG 441

Query: 440 -------IQNGNEDEAV------DLFQRMGKNDKVKR--------NTASWNSLIAGYQQL 478
                  I+ G E E +      D++ + G+ D + +        +  SWN++IA     
Sbjct: 442 RGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHF 501

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
                   +  +M++    P+  T+L +LP C+ L    + KEIHG + +   ES++P+ 
Sbjct: 502 DDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIG 561

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           N+LI+ Y+K G++     +F  M  KD++TW +LI  + ++G    AL  F  M+  G+ 
Sbjct: 562 NALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVL 621

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           P+   F++ I A S +GMV  G + F  +   Y + P +EHY+ ++DL  RSG L +A E
Sbjct: 622 PDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEE 681

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
           FI  MP++PD+S+W ALL+ACR  GN ++A    +++ +L   D     L+  IYA  GK
Sbjct: 682 FILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGK 741

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----P 773
            +    VR   +    +   G  WIE++  VY F TG  S    D +   L+ +      
Sbjct: 742 WDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAK 801

Query: 774 ENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHE 833
           E   A    +   +EE++K ++   HSE+LA+AF L+ +++    + ++KN+R+C  CH 
Sbjct: 802 EGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLL-NTKPGSPLLVMKNLRVCGDCHT 860

Query: 834 TAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             KY++ +   EI + D+   H FK+G CSCGD+W
Sbjct: 861 VTKYITKIMQREILVRDANRFHRFKDGACSCGDHW 895



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 155/617 (25%), Positives = 276/617 (44%), Gaps = 88/617 (14%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  NG   +A+     +  +  +    T+ +++ +C     + L   +H   + +  E D
Sbjct: 96  LTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESD 155

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +++   L+ +Y++   LD+AR VFE+M  R+  +W+++I  Y  +  W + ++++     
Sbjct: 156 LYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRM 215

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G+ PD F    +L ACG+    + G  +H ++ K+G++    + N +L++Y K  +L  
Sbjct: 216 TGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLRE 275

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-----------------CREE 253
           ARR F  M  KD V WN+MI GY Q+G ++ + +LF  M                 C + 
Sbjct: 276 ARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQS 335

Query: 254 IKLGVVTF-----------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
             L V  F                 NILI  Y + G    A E+    +      D  TW
Sbjct: 336 GDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTK----CKDSVTW 391

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             +I+G+ Q+G   + L+ FK M  +   P+ VT    +S  + L  +  G  IH   +K
Sbjct: 392 NSLINGYTQSGYYKEGLESFKMMK-MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIK 450

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            GF  ++++GNSL+++Y+KC E++   +VF  +   D+ SWN++IA       C   +++
Sbjct: 451 FGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQM 510

Query: 417 FIKMQESDVPP-----------------------------------NVITWNVLISGYIQ 441
             +M+   + P                                   NV   N LI  Y +
Sbjct: 511 INEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSK 570

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G+ +  + +F+ M + D V     +W +LI+ +   G+   AL  F+ M+ S   P+ V
Sbjct: 571 CGSLENCIKVFKYMKEKDVV-----TWTALISAFGMYGEGKKALKAFQDMELSGVLPDSV 625

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSL-PVMNS---LIDTYAKSGNIVYSRTI 557
             ++ + AC++   S  VKE      R   + +L P M     ++D  A+SG +  +   
Sbjct: 626 AFIAFIFACSH---SGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEF 682

Query: 558 FDGMSSK-DIITWNSLI 573
              M  K D   W +L+
Sbjct: 683 ILSMPMKPDASLWGALL 699



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 164/621 (26%), Positives = 279/621 (44%), Gaps = 91/621 (14%)

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           +FL   +L+   +  +    + +HSL+I  G+S        +++ Y +    I +   F 
Sbjct: 19  EFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFR 78

Query: 217 SMDEKDGV-AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------------- 261
           S+   + V  WNS+I      G   +A   + +M  ++++    TF              
Sbjct: 79  SISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLE 138

Query: 262 ---------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
                                N LI  Y++    D A  + + M +     D  +W  +I
Sbjct: 139 LGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSN----RDSVSWNSLI 194

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           SG+  NG    ALD++ +    G++P+  T++S + AC  L A+  G+ +H +  K+G  
Sbjct: 195 SGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIA 254

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            DV++GN L++MY K E L  A RVF  +  KD  +WN+MI GY Q G    + +LF+ M
Sbjct: 255 GDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM 314

Query: 421 QESDVPP----------------------------------NVITWNVLISGYIQNGNED 446
            +  VP                                   + +  N+LI  Y + G+  
Sbjct: 315 IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLL 374

Query: 447 EAVDLFQRMGKNDKVK-RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
            A ++F      D  K +++ +WNSLI GY Q G     L  F+ M+     P+ VT + 
Sbjct: 375 AAQEVF------DTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKME-RKPDSVTFVL 427

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           +L   + L   N+ + IH  V++   E+ L + NSL+D YAK G +     +F  MS+ D
Sbjct: 428 LLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHD 487

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
           II+WN++I   V          + ++M++ GL P+  T L I+   SL  +   GK++  
Sbjct: 488 IISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHG 547

Query: 626 SITEC--YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
            I +      +P+    +A+I++Y + G LE  ++  + M  E D   W AL++A  ++G
Sbjct: 548 YIFKSGFESNVPI---GNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMYG 603

Query: 684 NIDLAVLAIERLFDLEPGDVL 704
               A+ A +   D+E   VL
Sbjct: 604 EGKKALKAFQ---DMELSGVL 621


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 239/742 (32%), Positives = 402/742 (54%), Gaps = 60/742 (8%)

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           +LQ C +    + G+ +HS++    +     + + ++ +YV CG L   RR F+ +  + 
Sbjct: 107 VLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEK 166

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVK 282
              WN +++GY +IG   E+  LF +M RE   LG+       + +++LG          
Sbjct: 167 VFLWNLLMNGYAKIGNFRESLSLFKRM-RE---LGIRRVESARKLFDELGD--------- 213

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
                    DV +W  MISG+  NG + + LDLF++M  +G+  +  T+ S ++ C++  
Sbjct: 214 --------RDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTG 265

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
            L +G  +H  A+K  F  ++ + N L++MYSK   L +A +VF+ + ++ V SW SMIA
Sbjct: 266 MLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIA 325

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI-----SGYIQNGNE------------ 445
           GY + G    +  LF +M++  + P++ T   ++     +G ++NG +            
Sbjct: 326 GYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQS 385

Query: 446 -----DEAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
                +  +D++ + G         ++   ++  SWN++I GY +    N AL +F +MQ
Sbjct: 386 DLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQ 445

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
            +   PN +T+  +LPACA L A  + +EIHG +LR        V N+L+D Y K G + 
Sbjct: 446 YNS-KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALG 504

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            +R +FD +  KD+++W  +I GY +HG+   A+  F++M++ G++P+  +F+SI+ A S
Sbjct: 505 LARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS 564

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
            +G++D G   F  +     I P  EHY+ ++DL  R+G L +A +FI+ MPIEPD++IW
Sbjct: 565 HSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIW 624

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR-KLERE 731
            ALL  CRI+ ++ LA    E +F+LEP +     L+  IYA   K E+  K+R ++ R 
Sbjct: 625 GALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRR 684

Query: 732 NTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLC 786
             R+N  G  WIE+K  V+ FVTG  S   ++ +   L+        E    +  ++ + 
Sbjct: 685 GLRKNP-GCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIK 743

Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
            ++ EKE     HSEK+A+AF ++ S     T+R+ KN+R+C  CHE AK++S M   +I
Sbjct: 744 ADDTEKEMALCGHSEKIAMAFGIL-SLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDI 802

Query: 847 FLADSKCLHHFKNGQCSCGDYW 868
            L DS   HHFK+G CSC  +W
Sbjct: 803 ILRDSNRFHHFKDGSCSCRGHW 824



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/541 (26%), Positives = 244/541 (45%), Gaps = 84/541 (15%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEID 90
            C  G L  A+ +++       ++R  TY ++LQ C D  SI   R++H+ +     E+D
Sbjct: 78  FCELGNLRRAMELINQSPKPDLELR--TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVD 135

Query: 91  VFVKTKLLSVYAKCGCL------------------------------------------- 107
             + +KL+ +Y  CG L                                           
Sbjct: 136 GVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRE 195

Query: 108 ------DDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFP 161
                 + AR++F+++ +R++ +W++MI  Y  +    + ++LF  M+  G+  D     
Sbjct: 196 LGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMV 255

Query: 162 KILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK 221
            ++  C N G    G+ +H   IK        + N +L +Y K G L  A + FE+M E+
Sbjct: 256 SVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGER 315

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-------------Y 268
             V+W SMI+GY + G +D + RLF +M +E I   + T   ++ +             +
Sbjct: 316 SVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVH 375

Query: 269 NQLGQ---------CDVAMEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTS 310
           N + +          +  M+M  +  S+G    VF         +W  MI G+++N   +
Sbjct: 376 NYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPN 435

Query: 311 QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI 370
           +AL+LF EM +    PN +T+   + AC  L AL  G EIH   ++ GF+ D  V N+L+
Sbjct: 436 EALNLFVEMQY-NSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALV 494

Query: 371 NMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
           +MY KC  L  A  +FDMI +KD+ SW  MIAGY   GY  +A   F +M+ S + P+ +
Sbjct: 495 DMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEV 554

Query: 431 TWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
           ++  ++     +G  DE    F  M  N  ++  +  +  ++    + G  + A    + 
Sbjct: 555 SFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKM 614

Query: 491 M 491
           M
Sbjct: 615 M 615



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 134/534 (25%), Positives = 228/534 (42%), Gaps = 123/534 (23%)

Query: 252 EEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQ 311
           E I   +  +NI I  + +LG    AME++ +       PD                   
Sbjct: 62  ETIDCKITDYNIEICRFCELGNLRRAMELINQSPK----PD------------------- 98

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
            L+L              T  S +  C DLK++  G  IHS+        D ++G+ L+ 
Sbjct: 99  -LEL-------------RTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVF 144

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV------ 425
           MY  C +L    R+FD + ++ V+ WN ++ GY + G   ++  LF +M+E  +      
Sbjct: 145 MYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESA 204

Query: 426 --------PPNVITWNVLISGYIQNGNEDEAVDLFQRM---GKNDKVK---------RNT 465
                     +VI+WN +ISGY+ NG  ++ +DLF++M   G N  +           NT
Sbjct: 205 RKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNT 264

Query: 466 ---------------ASW-------NSLIAGYQQLGQKNNALGV---------------- 487
                          AS+       N L+  Y + G  N+A+ V                
Sbjct: 265 GMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMI 324

Query: 488 ---------------FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
                          F +M+     P+  TI ++L ACA        K++H  +    ++
Sbjct: 325 AGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQ 384

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
           S L V N+L+D YAK G++  + ++F  M  KDI++WN++I GY  +   + AL+LF +M
Sbjct: 385 SDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM 444

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS-AMIDLYGRSG 651
           + +  KPN  T   I+ A +    ++ G+++   I        +  H + A++D+Y + G
Sbjct: 445 Q-YNSKPNSITMACILPACASLAALERGQEIHGHILR--NGFSLDRHVANALVDMYLKCG 501

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD--LEPGDV 703
            L  A   + DM  E D   W  ++    +HG    A+ A   + +  +EP +V
Sbjct: 502 ALGLA-RLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEV 554



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 115/471 (24%), Positives = 208/471 (44%), Gaps = 42/471 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG   + + + + +   G      T ++++  C ++  + L R LH + +      ++ +
Sbjct: 229 NGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTL 288

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              LL +Y+K G L+ A +VFE M ER++ +W++MI  Y+R+      V LF  M ++G+
Sbjct: 289 NNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGI 348

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD F    IL AC   G  E GK +H+ + +  M     V N+++ +Y KCG +  A  
Sbjct: 349 SPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHS 408

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F  M  KD V+WN+MI GY +    +EA  LF +M +   K   +T   ++ +   L  
Sbjct: 409 VFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITMACILPACASLAA 467

Query: 274 CDVAME----------------------MVKRMESLGIT---------PDVFTWTCMISG 302
            +   E                      M  +  +LG+           D+ +WT MI+G
Sbjct: 468 LERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAG 527

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           +  +G  S+A+  F EM   G+ P+ V+  S + AC+    L  G    ++       + 
Sbjct: 528 YGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEP 587

Query: 363 VLVGNS-LINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAG---YCQAGYCGKAYELF 417
                + ++++ ++   L  A +   M+  + D   W +++ G   Y       K  E  
Sbjct: 588 KSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHV 647

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
            +++    P N   + +L + Y +    +E   L +R+G+    K    SW
Sbjct: 648 FELE----PENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSW 694



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/286 (22%), Positives = 107/286 (37%), Gaps = 62/286 (21%)

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           T  SVL  CA L +    + IH  +    +E    + + L+  Y   G++   R IFD +
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 562 SSKDIITWNSL------------------------------------------------- 572
           +++ +  WN L                                                 
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQ 632
           I GYV +G     LDLF+QM   G+  +  T +S++   S  GM+ LG+ +     +   
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKA-S 281

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAI 692
               +   + ++D+Y +SG L  A++  E M  E     W +++      G  D++V   
Sbjct: 282 FGKELTLNNCLLDMYSKSGNLNSAIQVFETMG-ERSVVSWTSMIAGYAREGLSDMSV--- 337

Query: 693 ERLF------DLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
            RLF       + P D+     IL   A  G  E+   V    +EN
Sbjct: 338 -RLFHEMEKEGISP-DIFTITTILHACACTGLLENGKDVHNYIKEN 381


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 275/970 (28%), Positives = 455/970 (46%), Gaps = 121/970 (12%)

Query: 10   QQLHSLLTK---KSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQ--------------- 51
            ++LHS + K    +N    +  LDF    G L+ A+ V D +  +               
Sbjct: 88   RKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELASR 147

Query: 52   ----------GAKVRRN------TYINLLQACID-SNSIHLARKLHA-FLNLVTEIDVFV 93
                      G  V  N      T+  +L+AC   S +  +  ++HA  +         V
Sbjct: 148  SLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIV 207

Query: 94   KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
               L+ +Y++ G +D AR VF+ +  ++  +W AMI   S+++   E + LF  M   G+
Sbjct: 208  CNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGI 267

Query: 154  FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             P  + F  +L AC      E G+ +H LV+KLG S    V N+++++Y   G LI A  
Sbjct: 268  MPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEH 327

Query: 214  FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
             F +M ++D V +N++I+G  Q G  ++A  LF +M  + ++    T   L+ + +  G 
Sbjct: 328  IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGT 387

Query: 274  CDVAMEMVKRMESLGITPD-------------------------------VFTWTCMISG 302
                 ++      LG   +                               V  W  M+  
Sbjct: 388  LFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVA 447

Query: 303  FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
            +        +  +F++M    ++PN  T  S +  C  L  L +G +IHS  +K  F  +
Sbjct: 448  YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLN 507

Query: 363  VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
              V + LI+MY+K  +L+ A  +      KDV SW +MIAGY Q  +  KA   F +M +
Sbjct: 508  AYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 567

Query: 423  SDVPPNVITW-----------------------------------NVLISGYIQNGNEDE 447
              +  + +                                     N L++ Y + GN +E
Sbjct: 568  RGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEE 627

Query: 448  AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
            A   F++    D +     +WN+L++G+QQ G    AL VF +M       N  T  S +
Sbjct: 628  AYLAFEQTEAGDNI-----AWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAV 682

Query: 508  PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
             A +      + K++H  + +   +S   V N++I  YAK G+I  ++  F  +S K+ +
Sbjct: 683  KAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEV 742

Query: 568  TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
            +WN++I  Y  HGF   ALD FDQM    ++PN  T + ++ A S  G+VD G + F S+
Sbjct: 743  SWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESM 802

Query: 628  TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
               Y + P  EHY  ++D+  R+G L  A +FI +MPIEPD+ +W  LL+AC +H N+++
Sbjct: 803  NTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEI 862

Query: 688  AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
               A   L +LEP D     L+  +YA+C K +     R+  +E   +   GQ WIEVKN
Sbjct: 863  GEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKN 922

Query: 748  LVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGI 798
             +++F  G  +   +D ++ + +    ++T R+S  G           +++E+K+    I
Sbjct: 923  SIHSFYVGDQNHPLADEIHEYFK----DLTKRASEIGYVQDCFSLLSELQQEQKDPTIFI 978

Query: 799  HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
            HSEKLA++F L+ S  A   I ++KN+R+C  CH+  K+VS + + EI + D+   HHF+
Sbjct: 979  HSEKLAISFGLL-SLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFE 1037

Query: 859  NGQCSCGDYW 868
             G CSC DYW
Sbjct: 1038 GGACSCKDYW 1047



 Score =  252 bits (643), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 192/707 (27%), Positives = 327/707 (46%), Gaps = 74/707 (10%)

Query: 45  LDSIATQGAKVRRNTYINLLQACIDSN-SIHLARKLHA-FLNLVTEIDVFVKTKLLSVYA 102
           +DS+   G +    T   LL+ C+ +N S+   RKLH+  L L  + +  +  KLL  Y 
Sbjct: 55  IDSVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYL 114

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
             G LD A +VF++M ER ++TW+ MI   +      +V  LF  MV + + P++  F  
Sbjct: 115 FKGDLDGALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSG 174

Query: 163 ILQAC-GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK 221
           +L+AC G    F+  + +H+ +I  G+     V N ++ +Y + G +  ARR F+ +  K
Sbjct: 175 VLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLK 234

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKM------------------CR--EEIKLG---- 257
           D  +W +MISG  +     EA RLF  M                  C+  E +++G    
Sbjct: 235 DHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH 294

Query: 258 -----------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN 306
                          N L+  Y  LG    A  +   M       D  T+  +I+G +Q 
Sbjct: 295 GLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQ----RDAVTYNTLINGLSQC 350

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           G   +A++LFK M   G+ P+  T+ S + AC+    L  G ++H+   K+GF  +  + 
Sbjct: 351 GYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIE 410

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
            +L+N+Y+KC ++E A   F   + ++V  WN M+  Y        ++ +F +MQ  ++ 
Sbjct: 411 GALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 470

Query: 427 PNVITWNVLISGYIQNGNEDEA----------------------VDLFQRMGKNDK---- 460
           PN  T+  ++   I+ G+ +                        +D++ ++GK D     
Sbjct: 471 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDI 530

Query: 461 ----VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
                 ++  SW ++IAGY Q    + AL  FR+M       + V + + + ACA L A 
Sbjct: 531 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 590

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
            + ++IH         S LP  N+L+  Y+K GNI  +   F+   + D I WN+L+ G+
Sbjct: 591 KEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGF 650

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
              G    AL +F +M   G+  N  TF S + A S    +  GK+V   IT+       
Sbjct: 651 QQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSE 709

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
            E  +A+I +Y + G + +A +   ++ ++ + S W A++ A   HG
Sbjct: 710 TEVCNAIISMYAKCGSISDAKKQFLELSMKNEVS-WNAMINAYSKHG 755



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 153/609 (25%), Positives = 270/609 (44%), Gaps = 69/609 (11%)

Query: 152 GLFPDDFLFPKILQAC-GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           G+ P+      +L+ C    G  + G+ +HS ++KLG      +   +L  Y+  G L  
Sbjct: 62  GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDG 121

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS--- 267
           A + F+ M E+    WN MI        + +   LF +M  E +     TF+ ++ +   
Sbjct: 122 ALKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRG 181

Query: 268 ----------------YNQLGQ----CDVAMEMVKRMESLGITPDVF---------TWTC 298
                           Y  LG+    C+  +++  R   +     VF         +W  
Sbjct: 182 GSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVA 241

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           MISG ++N    +A+ LF +M  +G+MP     +S +SAC  +++L +G ++H L +K+G
Sbjct: 242 MISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 301

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
           F+ D  V N+L+++Y     L +AE +F  +  +D  ++N++I G  Q GY  KA ELF 
Sbjct: 302 FSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 361

Query: 419 KMQESDVPPNVITWNVLI-----SGYIQNGNEDEAVDLFQRMGKNDKVK----------- 462
           +MQ   + P+  T   L+      G + +G +  A         NDK++           
Sbjct: 362 RMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCS 421

Query: 463 --------------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
                          N   WN ++  Y  L    N+  +FR+MQ     PN  T  S+L 
Sbjct: 422 DIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 481

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT 568
            C  L      ++IH  +++ S + +  V + LID YAK G +  +  I    + KD+++
Sbjct: 482 TCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS 541

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS-- 626
           W ++I GY  + F   AL  F QM   G++ +     + + A +    +  G+++     
Sbjct: 542 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 601

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
           ++     +P     +A++ LY + G +EEA    E      D+  W AL++  +  GN +
Sbjct: 602 VSGFSSDLPF---QNALVTLYSKCGNIEEAYLAFEQTE-AGDNIAWNALVSGFQQSGNNE 657

Query: 687 LAVLAIERL 695
            A+    R+
Sbjct: 658 EALRVFARM 666


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 245/761 (32%), Positives = 398/761 (52%), Gaps = 84/761 (11%)

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
           L+IK G       +  +++++ K   +  A R FE ++ K  V +++M+ GY +     +
Sbjct: 66  LIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRD 125

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRS---------------------------------- 267
           A R +++M  +E+   V  F  L++                                   
Sbjct: 126 AVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVN 185

Query: 268 -YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            Y +  Q + A +M +RM       D+ +W  +++G+AQNG   +A+ +  +M   G  P
Sbjct: 186 LYAKCRQIEDAYKMFERMPQ----RDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKP 241

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           + +T+ S + A  DLKAL +G  IH  A + GF   V V  ++++ Y KC  + +A  VF
Sbjct: 242 DSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVF 301

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP------------------- 427
             +  ++V SWN+MI GY Q G   +A+  F+KM +  V P                   
Sbjct: 302 KGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLE 361

Query: 428 ----------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                           +V   N LIS Y +    D A  +F  +       +   +WN++
Sbjct: 362 RGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKH-----KTVVTWNAM 416

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           I GY Q G  N AL +F +MQS    P+  T++SV+ A A L  + + K IHG  +R  +
Sbjct: 417 ILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLM 476

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
           + ++ V  +LIDT+AK G I  +R +FD M  + +ITWN++I GY  +G    ALDLF++
Sbjct: 477 DKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNE 536

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           M++  +KPN  TFLS+I A S +G+V+ G   F S+ E Y + P ++HY AM+DL GR+G
Sbjct: 537 MQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAG 596

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
           +L++A +FI+DMP++P  ++  A+L ACRIH N++L     + LFDL+P D     L+  
Sbjct: 597 RLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLAN 656

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN 771
           +YA     +   +VR    +   + + G   +E++N V+TF +G  +   S  +Y++L+ 
Sbjct: 657 MYASASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSGSTNHPQSKRIYAYLET 716

Query: 772 VPENVTARS----SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRM 827
           + + + A      ++S   +EE+ KE++   HSE+LA+AF L+ +      I I KN+R+
Sbjct: 717 LGDEMKAAGYVPDTNSIHDVEEDVKEQLLSSHSERLAIAFGLLNTRHGT-AIHIRKNLRV 775

Query: 828 CVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           C  CHE  KY+S++   EI + D +  HHFKNG CSCGDYW
Sbjct: 776 CGDCHEATKYISLVTGREIIVRDLRRFHHFKNGICSCGDYW 816



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 244/489 (49%), Gaps = 47/489 (9%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNLVT---EIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           +  LLQ   ++  +   R++H  +  +T   + ++F  T ++++YAKC  ++DA ++FE 
Sbjct: 145 FTYLLQLSGENLDLRRGREIHGMV--ITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFER 202

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M +R+L +W+ ++  Y+++   R  V++   M + G  PD      +L A  +      G
Sbjct: 203 MPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIG 262

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           + +H    + G   +  V  ++L  Y KCG +  AR  F+ M  ++ V+WN+MI GY Q 
Sbjct: 263 RSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQN 322

Query: 237 GENDEAHRLFDKMCRE---------------------------------EIKLG--VVTF 261
           GE++EA   F KM  E                                 E K+G  V   
Sbjct: 323 GESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVM 382

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N LI  Y++  + D+A  +   ++       V TW  MI G+AQNG  ++AL+LF EM  
Sbjct: 383 NSLISMYSKCKRVDIAASVFGNLKH----KTVVTWNAMILGYAQNGCVNEALNLFCEMQS 438

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
             + P+  T+ S I+A  DL        IH LA++     +V V  +LI+ ++KC  ++ 
Sbjct: 439 HDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQT 498

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
           A ++FD+++++ V +WN+MI GY   G+  +A +LF +MQ   V PN IT+  +I+    
Sbjct: 499 ARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSH 558

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
           +G  +E +  F+ M +N  ++     + +++    + G+ ++A   ++ +Q     P   
Sbjct: 559 SGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDA---WKFIQDMPVKPGIT 615

Query: 502 TILSVLPAC 510
            + ++L AC
Sbjct: 616 VLGAMLGAC 624



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 165/622 (26%), Positives = 272/622 (43%), Gaps = 104/622 (16%)

Query: 77  RKLHAFLNLVTEIDVF----VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY 132
           ++LH  L L+ +   +     +TKL+S++ K   + +A  VFE +  +    +  M+  Y
Sbjct: 58  KELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGY 117

Query: 133 SRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR 192
           +++   R+ V  +  M  D + P  + F  +LQ  G   D   G+ +H +VI  G     
Sbjct: 118 AKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNL 177

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
               +V+ +Y KC ++  A + FE M ++D V+WN++++GY Q G    A ++  +M   
Sbjct: 178 FAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEA 237

Query: 253 EIKLGVVTF-----------------------------------NILIRSYNQLGQCDVA 277
             K   +T                                      ++ +Y + G    A
Sbjct: 238 GQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSA 297

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
             + K M S     +V +W  MI G+AQNG + +A   F +M   GV P  V++  A+ A
Sbjct: 298 RLVFKGMSS----RNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHA 353

Query: 338 CTDLKALAMGMEIHSL--AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
           C +L  L  G  +H L    K+GF  DV V NSLI+MYSKC+ ++ A  VF  +K K V 
Sbjct: 354 CANLGDLERGRYVHRLLDEKKIGF--DVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVV 411

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPP---------------------------- 427
           +WN+MI GY Q G   +A  LF +MQ  D+ P                            
Sbjct: 412 TWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLA 471

Query: 428 -------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
                  NV     LI  + + G    A  LF  M      +R+  +WN++I GY   G 
Sbjct: 472 IRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQ-----ERHVITWNAMIDGYGTNGH 526

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAY-------LVASNKVKEIHGCVLRRSLES 533
              AL +F +MQ+    PN +T LSV+ AC++       +     +KE +G      LE 
Sbjct: 527 GREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYG------LEP 580

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT-WNSLICGYVLHGFWHAALDLFDQM 592
           ++    +++D   ++G +  +      M  K  IT   +++    +H          D++
Sbjct: 581 TMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADEL 640

Query: 593 KSFGLKPNRGTFLSIILAHSLA 614
             F L P+ G +  ++LA+  A
Sbjct: 641 --FDLDPDDGGY-HVLLANMYA 659



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 144/539 (26%), Positives = 241/539 (44%), Gaps = 116/539 (21%)

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           CT LK L    +I  L +K GF ++ L    LI+++ K   +  A RVF+ ++ K    +
Sbjct: 54  CTSLKELH---QILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLY 110

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNV--ITWNVLISG--------------YIQ 441
           ++M+ GY +      A   + +M+  +V P V   T+ + +SG               I 
Sbjct: 111 HTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVIT 170

Query: 442 NGNE-------------------DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
           NG +                   ++A  +F+RM + D V     SWN+++AGY Q G   
Sbjct: 171 NGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLV-----SWNTVVAGYAQNGFAR 225

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
            A+ V  +MQ +   P+ +T++SVLPA A L A    + IHG   R   E  + V  +++
Sbjct: 226 RAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAML 285

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
           DTY K G++  +R +F GMSS+++++WN++I GY  +G    A   F +M   G++P   
Sbjct: 286 DTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNV 345

Query: 603 TFLSIILAHSLAGMVDL-----------GKKVFCSITECYQIIPM--------------- 636
           + +  +  H+ A + DL            KK+   ++    +I M               
Sbjct: 346 SMMGAL--HACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFG 403

Query: 637 -IEH-----YSAMIDLYGRSGKLEEAMEFIEDMP---IEPDSSIWEALLTACR------- 680
            ++H     ++AMI  Y ++G + EA+    +M    I+PDS    +++TA         
Sbjct: 404 NLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQ 463

Query: 681 ---IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNS 737
              IHG      LAI  L D    +V +   ++  +A CG  + A K+  L +E      
Sbjct: 464 AKWIHG------LAIRTLMD---KNVFVCTALIDTHAKCGAIQTARKLFDLMQE------ 508

Query: 738 FGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN---VPENVT-----ARSSHSGLCIE 788
             +  I    ++  + T G      D L++ +QN    P  +T     A  SHSGL  E
Sbjct: 509 --RHVITWNAMIDGYGTNGHGREALD-LFNEMQNGSVKPNEITFLSVIAACSHSGLVEE 564



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 165/371 (44%), Gaps = 6/371 (1%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN- 84
           +T +D    NG   EA      +  +G +    + +  L AC +   +   R +H  L+ 
Sbjct: 313 NTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDE 372

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
                DV V   L+S+Y+KC  +D A  VF +++ + + TW+AMI  Y+++    E + L
Sbjct: 373 KKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNL 432

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           F  M    + PD F    ++ A  +       K +H L I+  M     V  +++  + K
Sbjct: 433 FCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAK 492

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
           CG +  AR+ F+ M E+  + WN+MI GY   G   EA  LF++M    +K   +TF  +
Sbjct: 493 CGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSV 552

Query: 265 IRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           I + +  G  +  M   + M E+ G+ P +  +  M+    + GR   A    ++M    
Sbjct: 553 IAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMP--- 609

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V P    + + + AC   K + +G +       +   DD      L NMY+     +   
Sbjct: 610 VKPGITVLGAMLGACRIHKNVELGEKTADELFDLD-PDDGGYHVLLANMYASASMWDKVA 668

Query: 384 RVFDMIKDKDV 394
           RV   ++ K +
Sbjct: 669 RVRTAMEKKGI 679


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 243/785 (30%), Positives = 409/785 (52%), Gaps = 79/785 (10%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D ++  KL++ Y+   C +DA  + + + +  +Y++S++I A ++ + + + + +F  M 
Sbjct: 49  DGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMF 108

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             GL PD  + P + + C     F+AGK +H +    G+     V+ S+  +Y++CG++ 
Sbjct: 109 SHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRM- 167

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
                                          +A ++FD+M  ++    VVT + L+  Y 
Sbjct: 168 ------------------------------GDARKVFDRMSEKD----VVTCSALLCGYA 193

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           + G  +  + ++  ME  GI P++ +W  ++SGF ++G   +A+ +F++M  +G  P+ V
Sbjct: 194 RKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQV 253

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           T++S + +  D + L MG +IH   +K G   D  V +++++MY K   +    ++FD  
Sbjct: 254 TVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFD-- 311

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
                  +  M  G C                           N  I+G  +NG  D+A+
Sbjct: 312 ------EFEMMETGVC---------------------------NAYITGLSRNGLVDKAL 338

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           ++F  + K  K++ N  SW S+IAG  Q G+   AL +FR+MQ +   PN VTI S+LPA
Sbjct: 339 EMFG-LFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPA 397

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           C  + A    +  HG  +R  L   + V ++LID YAK G I  S+ +F+ M +K+++ W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCW 457

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
           NSL+ GY +HG     + +F+ +    LKP+  +F S++ A    G+ D G K F  ++E
Sbjct: 458 NSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSE 517

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            Y I P +EHYS M++L GR+GKL+EA + I+++P EPDS +W ALL +CR+  N+DLA 
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAE 577

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR-KLERENTRRNSFGQCWIEVKNL 748
           +A ++LF LEP +     L+  IYA  G   +   +R K+E    ++N  G  WI+VKN 
Sbjct: 578 IAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNP-GCSWIQVKNK 636

Query: 749 VYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGI-----HSEKL 803
           VYT +    S    D +   +  + E +        L    ++ EE         HSEKL
Sbjct: 637 VYTLLACDKSHPQIDQITEKMDEISEEMRKSGHRPNLDFALQDVEEQEQEQMLWGHSEKL 696

Query: 804 ALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCS 863
           A+ F L+ +      ++++KN+R+C  CH   K++S     EIF+ D+   HHFK+G CS
Sbjct: 697 AVVFGLLNTPDGT-PLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICS 755

Query: 864 CGDYW 868
           CGD+W
Sbjct: 756 CGDFW 760



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 152/570 (26%), Positives = 264/570 (46%), Gaps = 44/570 (7%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTK 96
            +++I V   + + G     +   NL + C + ++    +++H    +   ++D FV+  
Sbjct: 97  FSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGS 156

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L  +Y +CG + DAR+VF+ M E+++ T SA++  Y+R     EVV +   M + G+ P+
Sbjct: 157 LFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPN 216

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
              +  IL      G  +   +M   +  LG    +   +SVL        L   R+   
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHG 276

Query: 217 SMDE----KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
            + +    KD    ++M+  Y + G      +LFD+   E ++ GV   N  I   ++ G
Sbjct: 277 YVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEF--EMMETGVC--NAYITGLSRNG 332

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
             D A+EM    +   +  +V +WT +I+G AQNG+  +AL+LF+EM   GV PN VTI 
Sbjct: 333 LVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIP 392

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           S + AC ++ AL  G   H  AV++   DDV VG++LI+MY+KC  ++ ++ VF+M+  K
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTK 452

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLF 452
           ++  WNS++ GY   G   +   +F  +  + + P+ I++  L+S   Q G  DE    F
Sbjct: 453 NLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
             M +   +K     ++ ++    + G+   A  + +++    F P+     ++L +C  
Sbjct: 513 NMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIP---FEPDSCVWGALLNSCR- 568

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 572
           L  +  + EI    L   LE   P       TY    NI                     
Sbjct: 569 LQNNVDLAEIAAQKLFH-LEPENP------GTYVLMSNI--------------------- 600

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
              Y   G W     + ++M+S GLK N G
Sbjct: 601 ---YAAKGMWTEVDSIRNKMESLGLKKNPG 627



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 154/324 (47%), Gaps = 37/324 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL----------- 83
           +G   EA+ +   +   G    + T  ++L +  DS ++++ R++H ++           
Sbjct: 230 SGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCV 289

Query: 84  ---------------NLVTEIDVF--VKTKLLSVY----AKCGCLDDAREVF----EDMR 118
                           ++   D F  ++T + + Y    ++ G +D A E+F    E   
Sbjct: 290 ISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKM 349

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           E N+ +W+++I   +++ +  E +ELF  M   G+ P+    P +L ACGN      G+ 
Sbjct: 350 ELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRS 409

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
            H   +++ +     V ++++ +Y KCG++  ++  F  M  K+ V WNS+++GY   G+
Sbjct: 410 THGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGK 469

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWT 297
             E   +F+ + R  +K   ++F  L+ +  Q+G  D   +    M E  GI P +  ++
Sbjct: 470 AKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYS 529

Query: 298 CMISGFAQNGRTSQALDLFKEMSF 321
           CM++   + G+  +A DL KE+ F
Sbjct: 530 CMVNLLGRAGKLQEAYDLIKEIPF 553



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 136/308 (44%), Gaps = 16/308 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFV 93
           NG+  EA+ +   +   G K  R T  ++L AC +  ++   R  H F   V  + DV V
Sbjct: 366 NGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHV 425

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAKCG +  ++ VF  M  +NL  W++++  YS   + +EV+ +F  +++  L
Sbjct: 426 GSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRL 485

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  +L ACG  G  + G K  + +  + G+       + ++ +  + GKL  A 
Sbjct: 486 KPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAY 545

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
              + +  E D   W ++++        D A     K+   E +    T+ ++   Y   
Sbjct: 546 DLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPE-NPGTYVLMSNIYAAK 604

Query: 272 GQCDVAMEMVKRMESLGITPD-----------VFTWTCMISGFAQNGRTSQALD-LFKEM 319
           G       +  +MESLG+  +           V+T         Q  + ++ +D + +EM
Sbjct: 605 GMWTEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEM 664

Query: 320 SFVGVMPN 327
              G  PN
Sbjct: 665 RKSGHRPN 672


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 247/818 (30%), Positives = 423/818 (51%), Gaps = 87/818 (10%)

Query: 64  LQACIDSNSIHL--ARKLHAF---LNLVTEIDVFVKTKLLSVYAKCGCLDDAR---EVFE 115
           L  C+ S++  L  AR+ HA    LNL +  D  + T LLS YA    L   +    +  
Sbjct: 5   LSQCLSSSTASLSQARQAHALILRLNLFS--DTQLTTSLLSFYANALSLSTPQLSLTLSS 62

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            +    L+++S++I A++R   +  V+  F  +    L PD FL P  +++C +    + 
Sbjct: 63  HLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDP 122

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G+ +H+     G      V +S+  +Y+KC +++ AR+ F+ M ++D             
Sbjct: 123 GQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRD------------- 169

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                                 VV ++ +I  Y++LG  + A E+   M S G+ P++ +
Sbjct: 170 ----------------------VVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVS 207

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  M++GF  NG   +A+ +F+ M   G  P+G T++  + A   L+ + +G ++H   +
Sbjct: 208 WNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVI 267

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K G   D  V +++++MY KC  ++   RVFD +++ ++ S N+                
Sbjct: 268 KQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNA---------------- 311

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
                               ++G  +NG  D A+++F +  K+ K++ N  +W S+IA  
Sbjct: 312 -------------------FLTGLSRNGMVDTALEVFNKF-KDQKMELNVVTWTSIIASC 351

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
            Q G+   AL +FR MQ+    PN VTI S++PAC  + A    KEIH   LRR +   +
Sbjct: 352 SQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDV 411

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            V ++LID YAK G I  +R  FD MS+ ++++WN+++ GY +HG     +++F  M   
Sbjct: 412 YVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQS 471

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           G KP+  TF  ++ A +  G+ + G + + S++E + I P +EHY+ ++ L  R GKLEE
Sbjct: 472 GQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEE 531

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A   I++MP EPD+ +W ALL++CR+H N+ L  +A E+LF LEP +     L+  IYA 
Sbjct: 532 AYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYAS 591

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES-YSDLLYSW----LQ 770
            G  ++  ++R++ +    R + G  WIEV + V+  + G  S     D+L       +Q
Sbjct: 592 KGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQMKDILEKLDKLNMQ 651

Query: 771 NVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
                   +++     +EE++KE+I   HSEKLA+   L+ +S     ++++KN+R+C  
Sbjct: 652 MKKSGYLPKTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSPG-QPLQVIKNLRICDD 710

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   K +S +   EI++ D+   HHFK+G CSCGD+W
Sbjct: 711 CHAVIKVISRLEGREIYVRDTNRFHHFKDGVCSCGDFW 748



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 3/200 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG+  EA+ +   +   G +    T  +L+ AC + +++   +++H F L      DV+V
Sbjct: 354 NGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYV 413

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAKCG +  AR  F+ M   NL +W+A++  Y+   + +E +E+F +M+Q G 
Sbjct: 414 GSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQ 473

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  +L AC   G  E G +  +S+  + G+         ++ +  + GKL  A 
Sbjct: 474 KPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAY 533

Query: 213 RFFESMD-EKDGVAWNSMIS 231
              + M  E D   W +++S
Sbjct: 534 SIIKEMPFEPDACVWGALLS 553


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 273/862 (31%), Positives = 412/862 (47%), Gaps = 130/862 (15%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSV 100
           A TV   +   G K+R +    L+     S+    ARKL    + + + DV  +T L++ 
Sbjct: 32  ARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKL---FDEIPQPDVIARTTLITA 88

Query: 101 YAKCGCLDDAREVFE----DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           Y+  G L  ARE+F     DMR+   Y  +AMI  YS        +ELF  M      PD
Sbjct: 89  YSALGNLKMAREIFNETPLDMRDTVFY--NAMITGYSHMNDGHSAIELFRAMRWANFQPD 146

Query: 157 DFLFPKILQACG-------NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK-- 207
           DF F  +L A          CG       MH  V+K G+     V N++L+VYVKC    
Sbjct: 147 DFTFASVLSASTLIFYDERQCGQ------MHGTVVKFGIEIFPAVLNALLSVYVKCASSP 200

Query: 208 -------LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
                  +  AR+ F+ M +++   W ++I+GY + G+   A  + D M           
Sbjct: 201 LVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMT---------- 250

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
                                   E  GI      W  MISG+  +G    AL LF++M 
Sbjct: 251 ------------------------EQPGIA-----WNAMISGYLHHGLFEDALTLFRKMR 281

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD----VLVGNSLINMYSKC 376
            +GV  +  T TS ISAC D     +G ++H+  +K     D    + VGN+LI +Y K 
Sbjct: 282 LLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKY 341

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
            +++ A ++F                           YE+ +K        ++ITWN L+
Sbjct: 342 GKVDGARKIF---------------------------YEMPVK--------DIITWNTLL 366

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
           SGY+  G  +EA   F +M +     +N  +W  +I+G  Q G    AL +F +M+   +
Sbjct: 367 SGYVNAGRMEEAKSFFAQMPE-----KNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGY 421

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            PN       + AC+ L A    +++H  ++    +S+L V N++I  YA+ G +  +RT
Sbjct: 422 EPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAART 481

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           +F  M   D ++WNS+I     HG    A++L++QM   G+ P+R TFL+++ A S AG+
Sbjct: 482 MFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGL 541

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           V+ G + F S+ E Y I P  +HY+ MIDL+ R+GK  +A   I+ MP E  + IWEALL
Sbjct: 542 VEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALL 601

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
             CR HGN+DL + A E+LF L P       L+  +YA  G+  D  + RKL R+   + 
Sbjct: 602 AGCRTHGNMDLGIEAAEKLFKLIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKK 661

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPENVTARSSHSGLC 786
                W EV+N V+ F+           +Y++L+           +P+  T    H    
Sbjct: 662 EPACSWTEVENKVHVFLVDDTVHPEVLSIYNYLEKLNLEMKKIGYIPD--TKYVLHD--- 716

Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
           +E E KE     HSEKLA+AF L+   Q   T+R+ KN+R+C  CH   K++S +   EI
Sbjct: 717 MESEHKEYALSTHSEKLAVAFGLMKLPQGA-TVRVFKNLRICGDCHNAIKFMSKVVGREI 775

Query: 847 FLADSKCLHHFKNGQCSCGDYW 868
            + D K  HHFKNG+CSC +YW
Sbjct: 776 VVRDGKRFHHFKNGECSCRNYW 797



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 175/400 (43%), Gaps = 47/400 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL----------- 83
           +G   +A+T+   +   G +V  +TY +++ AC D     L +++HA++           
Sbjct: 267 HGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDF 326

Query: 84  ------NLVTEI-------------------DVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
                  L+T                     D+     LLS Y   G +++A+  F  M 
Sbjct: 327 LLSVGNTLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMP 386

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           E+NL TW+ MI   +++    + ++LF  M  DG  P+D+ F   + AC   G  E G+ 
Sbjct: 387 EKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQ 446

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H+ ++ LG      V N+++ +Y +CG +  AR  F +M   D V+WNSMI+   Q G 
Sbjct: 447 LHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGH 506

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWT 297
             +A  L+++M +E I     TF  ++ + +  G  +        M E+ GI P    + 
Sbjct: 507 GVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYA 566

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            MI  F + G+ S A ++   M F    P      + ++ C     + +G+E      K+
Sbjct: 567 RMIDLFCRAGKFSDAKNVIDSMPFEARAP---IWEALLAGCRTHGNMDLGIEAAEKLFKL 623

Query: 358 GFTDD---VLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
               D   VL    L NMY+         R   +++D+ V
Sbjct: 624 IPQHDGTYVL----LSNMYASLGRWNDVARTRKLMRDRGV 659



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/432 (23%), Positives = 184/432 (42%), Gaps = 90/432 (20%)

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           +L + ++   +H   +  GF     + N LI++Y K  +   A ++FD I          
Sbjct: 25  NLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQ-------- 76

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
                                      P+VI    LI+ Y   GN   A ++F     + 
Sbjct: 77  ---------------------------PDVIARTTLITAYSALGNLKMAREIFNETPLD- 108

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK- 518
              R+T  +N++I GY  +   ++A+ +FR M+ + F P+  T  SVL A   +    + 
Sbjct: 109 --MRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQ 166

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAK------------------------------- 547
             ++HG V++  +E    V+N+L+  Y K                               
Sbjct: 167 CGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIW 226

Query: 548 ---------SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
                    +G++  +R I D M+ +  I WN++I GY+ HG +  AL LF +M+  G++
Sbjct: 227 TTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQ 286

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP----MIEHYSAMIDLYGRSGKLE 654
            +  T+ S+I A +  G   LGK+V   I +  ++ P    ++   + +I LY + GK++
Sbjct: 287 VDESTYTSVISACADGGFFLLGKQVHAYILKN-ELNPDRDFLLSVGNTLITLYWKYGKVD 345

Query: 655 EAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP-GDVLIQRLILQIY 713
            A +   +MP++ D   W  LL+     G ++ A    +  F   P  ++L   +++   
Sbjct: 346 GARKIFYEMPVK-DIITWNTLLSGYVNAGRMEEA----KSFFAQMPEKNLLTWTVMISGL 400

Query: 714 AICGKPEDALKV 725
           A  G  E ALK+
Sbjct: 401 AQNGFGEQALKL 412



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 128/274 (46%), Gaps = 13/274 (4%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           L  NG   +A+ + + +   G +     +   + AC    ++   R+LHA  ++L  +  
Sbjct: 400 LAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDST 459

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           + V   ++++YA+CG ++ AR +F  M   +  +W++MI A  +     + +EL+  M++
Sbjct: 460 LSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLK 519

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           +G+ PD   F  +L AC + G  E G +  +S++   G++        ++ ++ + GK  
Sbjct: 520 EGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFS 579

Query: 210 WARRFFESMD-EKDGVAWNSMISGYFQIGEND----EAHRLFDKMCREEIKLGVVTFNIL 264
            A+   +SM  E     W ++++G    G  D     A +LF  + + +      T+ +L
Sbjct: 580 DAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHD-----GTYVLL 634

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPD-VFTWT 297
              Y  LG+ +      K M   G+  +   +WT
Sbjct: 635 SNMYASLGRWNDVARTRKLMRDRGVKKEPACSWT 668


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 274/878 (31%), Positives = 444/878 (50%), Gaps = 97/878 (11%)

Query: 31  FLCGNGRLNEAITVLDSIATQGAKVRRNTYI-NLLQAC-IDSNSIHLARKLHAFLNLVTE 88
            L G  RL     VLD+         RNT   N + +C + +  I +AR+L    + +  
Sbjct: 101 LLSGYARLGR---VLDARRVFDGMPERNTVAWNAMVSCYVQNGDITMARRL---FDAMPS 154

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            DV     +++ Y     + DA  +F+ M +RNL TW+ MI  Y R ++  +  ++F +M
Sbjct: 155 RDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMM 214

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK-CGK 207
             +G  PD   F  +L A     D    +++  LV+K G      +  S+L VY +    
Sbjct: 215 HHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASA 274

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI-----------KL 256
           L  A +FF+ M E++   W++MI+     G  D A  ++ +   + I           + 
Sbjct: 275 LDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARC 334

Query: 257 G----------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
           G                VV++N +I  Y Q G  D A E+  RM       +  +W  MI
Sbjct: 335 GRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMP----FRNTISWAGMI 390

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +G+AQNGR+ +ALDL + +   G++P+  ++TS+  AC+ + AL  G ++HSLAVK G  
Sbjct: 391 AGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQ 450

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            +  V N+LI+MY KC  +E   +VF+ ++ KD                           
Sbjct: 451 FNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDT-------------------------- 484

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
                    ++WN  I+  +QN   ++A  +F  M     + R+  SW ++I+ Y Q  +
Sbjct: 485 ---------VSWNSFIAALVQNNMLEDARHIFDNM-----LSRDVVSWTTIISAYAQAER 530

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
            + A+  F+ M      PN   +  +L  C  L ++   ++IH   ++  ++S L V N+
Sbjct: 531 GDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANA 590

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           L+  Y K G    S  +FD M  +DI TWN+ I G   HG    A+ +++ M+S G+ PN
Sbjct: 591 LMSMYFKCG-CADSHKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVLPN 649

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
             TF+ ++ A S AG+VD G + F S++  Y + P++EHY+ M+DL GR+G ++ A +FI
Sbjct: 650 EVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDVQGAEKFI 709

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
            DMPIEPD+ IW ALL AC+IH N ++   A E+LF  EP +     ++  IY+  G   
Sbjct: 710 YDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIYSSLGMWV 769

Query: 721 DALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG-WSESYSDL------LYSWLQN-- 771
           +  ++RK+ ++       G  W++++N V++FVTG    E   ++      LY+ L+   
Sbjct: 770 EVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLYTLLRGTG 829

Query: 772 -VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
            VP+  T    H    I+EE+KE     HSEKLA+A+ L+ + +    I+I+KN+R+C  
Sbjct: 830 YVPD--TEFVLHD---IDEEQKESSLLYHSEKLAVAYGLLVTPKG-MPIQIMKNLRICGD 883

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   K+VS +   +I + D    HHF+NG CSCGD+W
Sbjct: 884 CHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 182/673 (27%), Positives = 302/673 (44%), Gaps = 137/673 (20%)

Query: 102 AKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD-DFLF 160
           A+ G L +AREVF+ M  R++  W++MI AY                   G+  D   LF
Sbjct: 44  ARLGRLREAREVFDAMPHRDIIAWNSMISAY----------------CNSGMLEDARILF 87

Query: 161 PKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE 220
             I  + GN                       R    +L+ Y + G+++ ARR F+ M E
Sbjct: 88  DAI--SGGNV----------------------RTATILLSGYARLGRVLDARRVFDGMPE 123

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM 280
           ++ VAWN+M+S Y Q G+   A RLFD M   +    V ++N ++  Y    Q   A  +
Sbjct: 124 RNTVAWNAMVSCYVQNGDITMARRLFDAMPSRD----VTSWNSMVTGYCHSRQMVDAWNL 179

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
            K+M       ++ TWT MISG+ +  +  +  D+F+ M   G  P+     S +SA T 
Sbjct: 180 FKQMPQ----RNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTG 235

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK-CEELEAAERVFDMIKDKDVYSWNS 399
           L+ L +   +  L +K GF  DV++G S++N+Y++    L+ A + FD + +++ Y+W++
Sbjct: 236 LQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWST 295

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVP---------------------------PNVITW 432
           MIA     G    A  ++ +     +P                           P V++W
Sbjct: 296 MIAALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSW 355

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           N +I+GY+QNG  DEA +LF RM       RNT SW  +IAGY Q G+   AL + + + 
Sbjct: 356 NAMITGYMQNGMVDEAKELFDRMP-----FRNTISWAGMIAGYAQNGRSEEALDLLQALH 410

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
            +   P+  ++ S   AC+++ A    +++H   ++   + +  V N+LI  Y K  N+ 
Sbjct: 411 RNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNME 470

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
           Y R +F+ M  KD ++WNS I   V +     A  +FD M                    
Sbjct: 471 YVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNM-------------------- 510

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE---PDS 669
                 L + V                ++ +I  Y ++ + +EA+EF + M  E   P+S
Sbjct: 511 ------LSRDVVS--------------WTTIISAYAQAERGDEAVEFFKTMLHEHEKPNS 550

Query: 670 SIWEALLTACRIHGNIDLA----VLAIERLFDLEPGDVLIQRLILQIYAICG-----KPE 720
            I   LL+ C   G+  L      +AI+   D E   +++   ++ +Y  CG     K  
Sbjct: 551 PILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSE---LIVANALMSMYFKCGCADSHKVF 607

Query: 721 DALKVRKLERENT 733
           D+++ R +   NT
Sbjct: 608 DSMEERDIFTWNT 620


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 284/928 (30%), Positives = 468/928 (50%), Gaps = 88/928 (9%)

Query: 18  KKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLAR 77
           ++SN   +       C +G L EA   LD ++   + V    Y+  L+ C    ++   R
Sbjct: 44  RQSNQPVQVPSPKLACFDGVLTEAFQRLD-VSENNSPVEAFAYV--LELCGKRRAVSQGR 100

Query: 78  KLHA--FLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
           +LH+  F    + E+D F+  KL+ +Y KCG LDDA +VF++M +R  + W+ MIGAY  
Sbjct: 101 QLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
           +      + L++ M  +G+      FP +L+AC    D  +G  +HSL++KLG      +
Sbjct: 160 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI 219

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEK-DGVAWNSMISGYFQIGENDEAHRLFDKM---- 249
            N+++++Y K   L  ARR F+   EK D V WNS++S Y   G++ E   LF +M    
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279

Query: 250 ----------------------CREEIKLGVV----------TFNILIRSYNQLGQCDVA 277
                                   +EI   V+            N LI  Y + G+   A
Sbjct: 280 PAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQA 339

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
             ++++M +     DV TW  +I G+ QN    +AL+ F +M   G   + V++TS I+A
Sbjct: 340 ERILRQMNN----ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
              L  L  GME+H+  +K G+  ++ VGN+LI+MYSKC       R F  + DKD+ SW
Sbjct: 396 SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISW 455

Query: 398 NSMIAGYCQAGYCGKAYELFIK----------------MQESDVPPNV-----ITWNVLI 436
            ++IAGY Q     +A ELF                  ++ S V  ++     I  ++L 
Sbjct: 456 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 515

Query: 437 SGYIQNGNEDEAVDLF---QRMGKNDKV-----KRNTASWNSLIAGYQQLGQKNNALGVF 488
            G +    ++E VD++   + MG   +V      ++  SW S+I+     G ++ A+ +F
Sbjct: 516 KGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELF 575

Query: 489 RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS--LESSLPVMNSLIDTYA 546
           R+M  +    + V +L +L A A L A NK +EIH  +LR+   LE S+ V  +++D YA
Sbjct: 576 RRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV--AVVDMYA 633

Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
             G++  ++ +FD +  K ++ + S+I  Y +HG   AA++LFD+M+   + P+  +FL+
Sbjct: 634 CCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLA 693

Query: 607 IILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
           ++ A S AG++D G+     +   Y++ P  EHY  ++D+ GR+  + EA EF++ M  E
Sbjct: 694 LLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 753

Query: 667 PDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR 726
           P + +W ALL ACR H   ++  +A +RL +LEP +     L+  ++A  G+  D  KVR
Sbjct: 754 PTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVR 813

Query: 727 KLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC 786
              + +      G  WIE+   V+ F     S   S  +Y  L  V   +     +    
Sbjct: 814 AKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADT 873

Query: 787 ------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSM 840
                 ++E EK ++   HSE++A+A+ L+ +      +RI KN+R+C  CH   K VS 
Sbjct: 874 KFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRA-CLRITKNLRVCRDCHTFCKLVSK 932

Query: 841 MHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +   +I + D+   HHF++G CSCGD W
Sbjct: 933 LFRRDIVMRDANRFHHFESGLCSCGDSW 960


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 251/778 (32%), Positives = 405/778 (52%), Gaps = 78/778 (10%)

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           +LQ C +    + GK + + +   G      + + +  +Y  CG L  A R F+ +  + 
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY-------------- 268
            + WN +++   + G+   +  LF KM    +++   TF+ + +S+              
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219

Query: 269 ----------NQLGQCDVAMEMV-KRMESLG------ITPDVFTWTCMISGFAQNGRTSQ 311
                     N +G   VA  +  +R++S           DV +W  +I+G+  NG   +
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
            L +F +M   G+  +  TI S  + C D + +++G  +HS+ VK  F+ +    N+L++
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLD 339

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MYSKC +L++A+ VF  + D+ V S+ SMIAGY + G  G+A +LF +M+E  + P+V T
Sbjct: 340 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399

Query: 432 ----------------------W-------------NVLISGYIQNGNEDEAVDLFQRMG 456
                                 W             N L+  Y + G+  EA  +F  M 
Sbjct: 400 VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM-QSSCFYPNCVTILSVLPACAYLVA 515
             D +     SWN++I GY +    N AL +F  + +   F P+  T+  VLPACA L A
Sbjct: 460 VKDII-----SWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
            +K +EIHG ++R    S   V NSL+D YAK G ++ +  +FD ++SKD+++W  +I G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
           Y +HGF   A+ LF+QM+  G++ +  +F+S++ A S +G+VD G + F  +    +I P
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
            +EHY+ ++D+  R+G L +A  FIE+MPI PD++IW ALL  CRIH ++ LA    E++
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694

Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
           F+LEP +     L+  IYA   K E   ++RK   +   R + G  WIE+K  V  FV G
Sbjct: 695 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAG 754

Query: 756 GWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALI 810
             S   ++ + ++L+ V      E  +  + ++ +  EE EKEE    HSEKLA+A  +I
Sbjct: 755 DSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGII 814

Query: 811 GSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            S      IR+ KN+R+C  CHE AK++S +   EI L DS   H FK+G CSC  +W
Sbjct: 815 SSGHGK-IIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 154/630 (24%), Positives = 289/630 (45%), Gaps = 89/630 (14%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T L   C +G L  A+ +L    +    +   T  ++LQ C DS S+   +++  F+  
Sbjct: 65  NTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122

Query: 86  VT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
               ID  + +KL  +Y  CG L +A  VF++++      W+ ++   ++   +   + L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           F  M+  G+  D + F  + ++  +      G+ +H  ++K G      V NS++A Y+K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--- 261
             ++  AR+ F+ M E+D ++WNS+I+GY   G  ++   +F +M    I++ + T    
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302

Query: 262 --------------------------------NILIRSYNQLGQCDVAMEMVKRMESLGI 289
                                           N L+  Y++ G  D A  + + M     
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD--- 359

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
              V ++T MI+G+A+ G   +A+ LF+EM   G+ P+  T+T+ ++ C   + L  G  
Sbjct: 360 -RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKR 418

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H    +     D+ V N+L++MY+KC  ++ AE VF  ++ KD+ SWN++I GY +  Y
Sbjct: 419 VHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCY 478

Query: 410 CGKAYELF-IKMQESDVPPNVITWNVL---------------ISGYI-QNGN------ED 446
             +A  LF + ++E    P+  T   +               I GYI +NG        +
Sbjct: 479 ANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN 538

Query: 447 EAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
             VD++ + G         +D   ++  SW  +IAGY   G    A+ +F +M+ +    
Sbjct: 539 SLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEA 598

Query: 499 NCVTILSVLPACAYLVASNKVKE--------IHGCVLRRSLESSLPVMNSLIDTYAKSGN 550
           + ++ +S+L AC++   S  V E         H C     +E ++     ++D  A++G+
Sbjct: 599 DEISFVSLLYACSH---SGLVDEGWRFFNIMRHEC----KIEPTVEHYACIVDMLARTGD 651

Query: 551 IVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
           ++ +    + M    D   W +L+CG  +H
Sbjct: 652 LIKAYRFIENMPIPPDATIWGALLCGCRIH 681


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 272/847 (32%), Positives = 415/847 (48%), Gaps = 118/847 (13%)

Query: 50  TQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDD 109
             G K R +    LL+    S+++  AR+L      +   D   +T L++ Y   G L+ 
Sbjct: 41  ASGFKPRGHFLNRLLEMYCKSSNVVYARQL---FEEIPNPDAIARTTLITAYCALGNLEL 97

Query: 110 AREVFE--DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA- 166
            RE+F    +  R+   ++AMI  Y+ +      +ELF  M +D   PDDF F  +L A 
Sbjct: 98  GREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSAL 157

Query: 167 ---CGN---CGDFEAGKLMHSLVIKLGMSCVRR-VRNSVLAVYVK--------CGKLIWA 211
               GN   CG       MH  V+K GM CV   V N++L+VYVK        C  ++ A
Sbjct: 158 VLFVGNEQQCGQ------MHCAVVKTGMGCVSSSVLNALLSVYVKRASELGIPCSAMVSA 211

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R+ F+ M ++D + W +MI+GY +  + + A  +F+ M                      
Sbjct: 212 RKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAM---------------------- 249

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
                       +E+LG       W  MISG+   G   +AL L ++M F+G+  + +T 
Sbjct: 250 ------------VENLGAA-----WNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITY 292

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           T+ ISAC ++ +  MG ++H+  +K          N L   +S C  +            
Sbjct: 293 TTIISACANVGSFQMGKQMHAYILK----------NELNPNHSFCLSVS----------- 331

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
                 N++I  YC+     +A ++F  M       N+ITWN ++SGY+  G  +EA   
Sbjct: 332 ------NALITLYCKNNKVDEARKIFYAMPVR----NIITWNAILSGYVNAGRMEEAKSF 381

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           F+ M       +N  +   +I+G  Q G  +  L +F++M+   F P        L AC+
Sbjct: 382 FEEMPV-----KNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACS 436

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
            L A    +++H  ++    ESSL V N++I  YAK G +  + ++F  M S D+++WNS
Sbjct: 437 VLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNS 496

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
           +I     HG    A++LFDQM   G+ P+R TFL+++ A S AG+V+ G+  F S+ E Y
Sbjct: 497 MIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESY 556

Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
            I P  +HY+ M+DL+ R+G    A   I+ MP +P + +WEALL  CRIHGN+DL + A
Sbjct: 557 GITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEA 616

Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
            E+LF L P +     L+  IYA  G+  D  KVRKL R+   R      WIEV+N V+ 
Sbjct: 617 AEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHV 676

Query: 752 FVTGGWSESYSDLLYSWLQN----------VPENVTARSSHSGLCIEEEEKEEISGIHSE 801
           F+           +Y +L+           +P+  T    H    +E E+KE     HSE
Sbjct: 677 FMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPD--TKFVLHD---MEYEQKEHALSTHSE 731

Query: 802 KLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQ 861
           KLA+ F ++       T+R+ KNIR+C  CH   K++S +   EI + D K  HHFKNG 
Sbjct: 732 KLAVGFGIM-KLPPDATVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGD 790

Query: 862 CSCGDYW 868
           CSC DYW
Sbjct: 791 CSCRDYW 797



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 172/399 (43%), Gaps = 47/399 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-----LNLVTEID 90
           G   EA+T+   +   G +    TY  ++ AC +  S  + +++HA+     LN      
Sbjct: 268 GCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFC 327

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV--------- 141
           + V   L+++Y K   +D+AR++F  M  RN+ TW+A++  Y    R  E          
Sbjct: 328 LSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPV 387

Query: 142 ----------------------VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
                                 ++LF  M  DG  P DF F   L AC   G  E G+ +
Sbjct: 388 KNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQL 447

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H+ ++ LG      V N+++++Y KCG +  A   F +M   D V+WNSMI+   Q G  
Sbjct: 448 HAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHG 507

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTC 298
            +A  LFD+M +E +    +TF  ++ + +  G  +        M ES GITP    +  
Sbjct: 508 VKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYAR 567

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           M+  F + G  S A  +   M      P      + ++ C     + +G+E      K+ 
Sbjct: 568 MVDLFCRAGMFSYARIVIDSMP---SKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLM 624

Query: 359 FTDD---VLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
             +D   VL    L N+Y+         +V  +++D+ V
Sbjct: 625 PQNDGTYVL----LSNIYADVGRWNDVAKVRKLMRDQAV 659



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 103/204 (50%), Gaps = 3/204 (1%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           L  NG  +E + +   +   G +     +   L AC    ++   R+LHA  ++L  E  
Sbjct: 400 LAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESS 459

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           + V   ++S+YAKCG ++ A  VF  M   +L +W++MI A  +     + +ELF  M++
Sbjct: 460 LSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLK 519

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           +G+FPD   F  +L AC + G  E G+   +S++   G++        ++ ++ + G   
Sbjct: 520 EGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFS 579

Query: 210 WARRFFESMDEKDGVA-WNSMISG 232
           +AR   +SM  K G   W ++++G
Sbjct: 580 YARIVIDSMPSKPGAPVWEALLAG 603



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 33/124 (26%)

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT----------- 568
           + +H  ++    +     +N L++ Y KS N+VY+R +F+ + + D I            
Sbjct: 33  RAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLITAYCAL 92

Query: 569 ----------------------WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
                                 +N++I GY  +G  H+AL+LF  M+    +P+  TF S
Sbjct: 93  GNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTS 152

Query: 607 IILA 610
           ++ A
Sbjct: 153 VLSA 156


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 271/847 (31%), Positives = 415/847 (48%), Gaps = 118/847 (13%)

Query: 50  TQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDD 109
             G K R +    LL+    S+++  AR+L      +   D   +T L++ Y   G L+ 
Sbjct: 41  ASGFKPRGHFLNRLLEMYCKSSNLVYARQL---FEEIPNPDAIARTTLITAYCALGNLEL 97

Query: 110 AREVFE--DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA- 166
            RE+F    +  R+   ++AMI  Y+ +      +ELF  M +D   PDDF F  +L A 
Sbjct: 98  GREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSVLSAL 157

Query: 167 ---CGN---CGDFEAGKLMHSLVIKLGMSCVRR-VRNSVLAVYVK--------CGKLIWA 211
               GN   CG       MH  V+K GM CV   V N++L+VYVK        C  ++ A
Sbjct: 158 VLFVGNEQQCGQ------MHCAVVKTGMGCVSSSVLNALLSVYVKRASELGISCSAMVSA 211

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R+ F+ M ++D + W +MI+GY +  + + A  +F+ M                      
Sbjct: 212 RKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAM---------------------- 249

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
                       +E+LG       W  MISG+   G   +AL L ++M F+G+  + +T 
Sbjct: 250 ------------VENLGAA-----WNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITY 292

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           T+ ISAC ++ +  MG ++H+  +K          N L   +S C  +            
Sbjct: 293 TTIISACANVGSFQMGKQVHAYILK----------NELNPNHSFCLSVS----------- 331

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
                 N++I  YC+     +A ++F  M       N+ITWN ++SGY+  G  +EA   
Sbjct: 332 ------NALITLYCKNNKVDEARKIFYAMPVR----NIITWNAILSGYVNAGRMEEAKSF 381

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           F+ M       +N  +   +I+G  Q G  +  L +F++M+   F P        L AC+
Sbjct: 382 FEEMPV-----KNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACS 436

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
            L A    +++H  ++    ESSL V N++I  YAK G +  + ++F  M S D+++WNS
Sbjct: 437 VLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNS 496

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
           +I     HG    A++LFDQM   G+ P+R TFL+++ A S AG+V+ G+  F S+ E Y
Sbjct: 497 MIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESY 556

Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
            I P  +HY+ M+DL+ R+G    A   I+ MP +P + +WEALL  CRIHGN+DL + A
Sbjct: 557 GITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEA 616

Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
            E+LF L P +     L+  IYA  G+  +  KVRKL R+   R      WIEV+N V+ 
Sbjct: 617 AEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHV 676

Query: 752 FVTGGWSESYSDLLYSWLQN----------VPENVTARSSHSGLCIEEEEKEEISGIHSE 801
           F+           +Y +L+           +P+  T    H    +E E+KE     HSE
Sbjct: 677 FMVDDDVHPEVLSVYRYLEQLGLEMKKLGYIPD--TKFVLHD---MEYEQKEHALSTHSE 731

Query: 802 KLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQ 861
           KLA+ F ++       T+R+ KNIR+C  CH   K++S +   EI + D K  HHFKNG 
Sbjct: 732 KLAVGFGIMKLPPGA-TVRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGD 790

Query: 862 CSCGDYW 868
           CSC DYW
Sbjct: 791 CSCRDYW 797



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 172/399 (43%), Gaps = 47/399 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-----LNLVTEID 90
           G   EA+T+   +   G +    TY  ++ AC +  S  + +++HA+     LN      
Sbjct: 268 GCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFC 327

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV--------- 141
           + V   L+++Y K   +D+AR++F  M  RN+ TW+A++  Y    R  E          
Sbjct: 328 LSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPV 387

Query: 142 ----------------------VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
                                 ++LF  M  DG  P DF F   L AC   G  E G+ +
Sbjct: 388 KNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQL 447

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H+ ++ LG      V N+++++Y KCG +  A   F +M   D V+WNSMI+   Q G  
Sbjct: 448 HAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHG 507

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTC 298
            +A  LFD+M +E +    +TF  ++ + +  G  +        M ES GITP    +  
Sbjct: 508 VKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYAR 567

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           M+  F + G  S A  +   M      P      + ++ C     + +G+E      K+ 
Sbjct: 568 MVDLFCRAGMFSYARIVIDSMP---SKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLM 624

Query: 359 FTDD---VLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
             +D   VL    L N+Y+         +V  +++D+ V
Sbjct: 625 PQNDGTYVL----LSNIYADVGRWNEVAKVRKLMRDQAV 659



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 126/265 (47%), Gaps = 12/265 (4%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           L  NG  +E + +   +   G +     +   L AC    ++   R+LHA  ++L  E  
Sbjct: 400 LAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESS 459

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           + V   ++S+YAKCG ++ A  VF  M   +L +W++MI A  +     + +ELF  M++
Sbjct: 460 LSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQMLK 519

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           +G+FPD   F  +L AC + G  E G+   +S++   G++        ++ ++ + G   
Sbjct: 520 EGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYARMVDLFCRAGMFS 579

Query: 210 WARRFFESMDEKDGVA-WNSMISGYFQIGEND----EAHRLFDKMCREEIKLGVVTFNIL 264
           +AR   +SM  K G   W ++++G    G  D     A +LF  M + +      T+ +L
Sbjct: 580 YARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQND-----GTYVLL 634

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGI 289
              Y  +G+ +   ++ K M    +
Sbjct: 635 SNIYADVGRWNEVAKVRKLMRDQAV 659


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 255/795 (32%), Positives = 396/795 (49%), Gaps = 88/795 (11%)

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           E +V    K ++ + + G + DA  +F  M  R+  T++AM+  YS + R      LF  
Sbjct: 35  EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRA 94

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV-----LAVY 202
           + +    PD++ +  +L A           +  SL    G+     VR+SV     ++ +
Sbjct: 95  IPR----PDNYSYNTLLHALA---------VSSSLADARGLFDEMPVRDSVTYNVMISSH 141

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
              G +  AR +F+   EKD V+WN M++ Y + G  +EA  LF+       +  V+++N
Sbjct: 142 ANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS----RTEWDVISWN 197

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            L+  Y Q G+   A E+  RM       DV +W  M+SG+A+ G   +A  LF      
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARRLFDAAP-- 251

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
                                                  DV    ++++ Y++   LE A
Sbjct: 252 -------------------------------------VRDVFTWTAVVSGYAQNGMLEEA 274

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
            RVFD + +++  SWN+M+A Y Q     +A ELF  M       NV +WN +++GY Q 
Sbjct: 275 RRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR----NVASWNTMLTGYAQA 330

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G  +EA  +F  M + D V     SW +++A Y Q G     L +F +M     + N   
Sbjct: 331 GMLEEAKAVFDTMPQKDAV-----SWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSA 385

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
              VL  CA + A     ++HG ++R        V N+L+  Y K GN+  +R  F+ M 
Sbjct: 386 FACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEME 445

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            +D+++WN++I GY  HGF   AL++FD M++   KP+  T + ++ A S +G+V+ G  
Sbjct: 446 ERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS 505

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F S+   + +    EHY+ MIDL GR+G+L EA + ++DMP EPDS++W ALL A RIH
Sbjct: 506 YFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 565

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
            N +L   A E++F+LEP +  +  L+  IYA  GK  DA K+R +  E   +   G  W
Sbjct: 566 RNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSW 625

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKE 793
           IEV+N V+TF  G       + +Y++L    E++  R   +G           +EEEEKE
Sbjct: 626 IEVQNKVHTFSAGDCVHPEKEKIYAFL----EDLDMRMKKAGYVSATDMVLHDVEEEEKE 681

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
            +   HSEKLA+A+ ++        IR++KN+R+C  CH   KY+S +    I L DS  
Sbjct: 682 HMLKYHSEKLAVAYGILNIPPG-RPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNR 740

Query: 854 LHHFKNGQCSCGDYW 868
            HHF+ G CSCGDYW
Sbjct: 741 FHHFRGGSCSCGDYW 755



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 218/453 (48%), Gaps = 26/453 (5%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           TY  ++ +  +   + LAR    + +L  E D      +L+ Y + G +++AR +F    
Sbjct: 133 TYNVMISSHANHGLVSLARH---YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT 189

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGK 177
           E ++ +W+A++  Y +  +  E  ELF  M       D   +  ++      GD  EA +
Sbjct: 190 EWDVISWNALMSGYVQWGKMSEARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARR 245

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
           L  +  ++   +       +V++ Y + G L  ARR F++M E++ V+WN+M++ Y Q  
Sbjct: 246 LFDAAPVRDVFTWT-----AVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRR 300

Query: 238 ENDEAHRLFDKM-CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
             DEA  LF+ M CR      V ++N ++  Y Q G  + A  +   M       D  +W
Sbjct: 301 MMDEAKELFNMMPCRN-----VASWNTMLTGYAQAGMLEEAKAVFDTMPQ----KDAVSW 351

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             M++ ++Q G + + L LF EM   G   N       +S C D+ AL  GM++H   ++
Sbjct: 352 AAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIR 411

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G+     VGN+L+ MY KC  +E A   F+ ++++DV SWN+MIAGY + G+  +A E+
Sbjct: 412 AGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEI 471

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F  M+ +   P+ IT   +++    +G  ++ +  F  M  +  V      +  +I    
Sbjct: 472 FDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLG 531

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           + G+   A  + + M    F P+     ++L A
Sbjct: 532 RAGRLAEAHDLMKDMP---FEPDSTMWGALLGA 561



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 149/288 (51%), Gaps = 8/288 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           NG L EA  V D++  + A     ++  ++ A I    +  A++L    N++   +V   
Sbjct: 268 NGMLEEARRVFDAMPERNAV----SWNAMVAAYIQRRMMDEAKEL---FNMMPCRNVASW 320

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             +L+ YA+ G L++A+ VF+ M +++  +W+AM+ AYS+     E ++LF  M + G +
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            +   F  +L  C +    E G  +H  +I+ G      V N++LA+Y KCG +  AR  
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           FE M+E+D V+WN+MI+GY + G   EA  +FD M     K   +T   ++ + +  G  
Sbjct: 441 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           +  +     M    G+T     +TCMI    + GR ++A DL K+M F
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 548



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 96/243 (39%), Gaps = 43/243 (17%)

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           LE  +   N  I  + ++G +  +  +F  M  +   T+N+++ GY  +G    A  LF 
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 591 QMK----------------SFGLKPNRG-----------TFLSIILAHSLAGMVDLGKKV 623
            +                 S  L   RG           T+  +I +H+  G+V L +  
Sbjct: 94  AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHY 153

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           F    E   +      ++ M+  Y R+G++EEA         E D   W AL++     G
Sbjct: 154 FDLAPEKDAV-----SWNGMLAAYVRNGRVEEARGLFNSR-TEWDVISWNALMSGYVQWG 207

Query: 684 NIDLAVLAIERLFDLEPG-DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
            +  A      LFD  PG DV+   +++  YA  G   D ++ R+L      R+ F   W
Sbjct: 208 KMSEA----RELFDRMPGRDVVSWNIMVSGYARRG---DMVEARRLFDAAPVRDVF--TW 258

Query: 743 IEV 745
             V
Sbjct: 259 TAV 261


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 255/884 (28%), Positives = 438/884 (49%), Gaps = 70/884 (7%)

Query: 53  AKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAR 111
           +K +   Y ++L+ C    S+ +A+ +H  +   V   D  +   L++VYAKC     AR
Sbjct: 108 SKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYAR 167

Query: 112 EVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG 171
            V   M +R++ +W+A+I     +    + + LF  M  +G+ P++F     L+AC  C 
Sbjct: 168 LVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCM 227

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
             + GK MH+   KLG+     V ++++ +Y KCG++  A + F  M E++ V WN +++
Sbjct: 228 ALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLN 287

Query: 232 GYFQIGENDEAHRLF------DKMCRE--------------EIKLGVVTFNILIRS---- 267
           GY Q G+     +LF      D  C E               +K G V  +++I+     
Sbjct: 288 GYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEG 347

Query: 268 --------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
                    +   +C +A++ +   +++   PD+  W+ +I+   Q G++ +++ LF  M
Sbjct: 348 NEFIGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQSEESIKLFHLM 406

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
                +PN  TI S +SA T+   L  G  IH+   K GF  DV V N+L+ MY K   +
Sbjct: 407 RLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCV 466

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG- 438
               ++++ + D+D+ SWN+ ++G    G   +   +F  M E    PN+ T+  ++   
Sbjct: 467 HDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSC 526

Query: 439 ---------------YIQNGNEDEA------VDLFQR--------MGKNDKVKRNTASWN 469
                           I+N  +D        +D++ +        +  N    R+  +W 
Sbjct: 527 SCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWT 586

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
            +I  Y Q  Q   AL  FR+MQ     PN  T+   L  C+ L +    +++H  V + 
Sbjct: 587 VIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKS 646

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
              S + V ++L+D YAK G +  +  +F+ +  +D I WN++ICGY  +G  + AL  F
Sbjct: 647 GHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAF 706

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
             M   G+ P+  TF  I+ A S  G+V+ GK+ F S+   + I P ++H + M+D+ GR
Sbjct: 707 RMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGR 766

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
            GK +E  +FI+ M +  ++ IWE +L A ++H N+ L   A  +LF+L+P +     L+
Sbjct: 767 VGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILL 826

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             I+A  G+ +D  +VR L      +   G  W+E    V+TFV+  +S      ++  L
Sbjct: 827 SNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKL 886

Query: 770 QNVPENVTA-----RSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
             +   + +     ++ +    + E EK+E    HSE+LAL FALI S+ +   IRI KN
Sbjct: 887 DELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALI-STSSEKKIRIFKN 945

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +R+C  CH+  K++S + + EI + D +  HHFKNG CSC D+W
Sbjct: 946 LRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSCNDFW 989



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 146/289 (50%), Gaps = 4/289 (1%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VFV 93
           G  +  +T+   +  +G      T+I++L +C     +H  R++HA + +  ++D   FV
Sbjct: 495 GMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHI-IKNQLDDNNFV 553

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +YAKC  L+DA   F  +  R+L+TW+ +I  Y++  +  + +  F  M Q+G+
Sbjct: 554 CTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGV 613

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P++F     L  C +    E G+ +HS+V K G      V ++++ +Y KCG +  A  
Sbjct: 614 KPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEA 673

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            FE++  +D +AWN++I GY Q G+ ++A   F  M  E I    VTF  ++ + +  G 
Sbjct: 674 LFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGL 733

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
            +   E    M    GI+P V    CM+    + G+  +  D  ++M  
Sbjct: 734 VEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQL 782


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 263/809 (32%), Positives = 419/809 (51%), Gaps = 94/809 (11%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR-RVRNSVLAVYVKCG 206
           M+  G+ PD++ FP +L+A  +  D E GK +H+ V K G       V N+++ +Y KCG
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK------LGVVT 260
                 + F+ + E++ V+WNS+IS      + + A   F  M  E ++      + VVT
Sbjct: 61  DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 120

Query: 261 -------------------------------FNILIRSYNQLGQCDVAMEMVKRMESLGI 289
                                           N L+  Y +LG+   +  +   + S G 
Sbjct: 121 ACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVL---LGSFG- 176

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             D+ TW  ++S   QN +  +AL+  +EM   GV P+  TI+S + AC+ L+ L  G E
Sbjct: 177 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKE 236

Query: 350 IHSLAVKMGFTDD-VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           +H+ A+K G  D+   VG++L++MY  C+++ +  RVFD + D+ +  WN+MIAGY Q  
Sbjct: 237 LHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNE 296

Query: 409 YCGKAYELFIKMQES-DVPPNVITWNVLISGYIQNG--NEDEAV---------------- 449
           +  +A  LFI M+ES  +  N  T   ++   +++G  +  EA+                
Sbjct: 297 HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ 356

Query: 450 ----DLFQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQS---- 493
               D++ R+GK D           R+  +WN++I GY       +AL +  KMQ+    
Sbjct: 357 NTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 416

Query: 494 -------SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
                      PN +T++++LP+CA L A  K KEIH   ++ +L + + V ++L+D YA
Sbjct: 417 VSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYA 476

Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
           K G +  SR +FD +  K++ITWN +I  Y +HG    A+DL   M   G+KPN  TF+S
Sbjct: 477 KCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFIS 536

Query: 607 IILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
           +  A S +GMVD G ++F  +   Y + P  +HY+ ++DL GR+G+++EA + +  MP +
Sbjct: 537 VFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRD 596

Query: 667 PD-SSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
            + +  W +LL A RIH N+++  +A + L  LEP       L+  IY+  G  + A +V
Sbjct: 597 FNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEV 656

Query: 726 RKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARS 780
           R+  +E   R   G  WIE  + V+ FV G  S   S+ L  +L+ +      E     +
Sbjct: 657 RRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDT 716

Query: 781 SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVS 839
           S     +EE+EKE +   HSEKLA+AF ++ +S  P T IR+ KN+R+C  CH   K++S
Sbjct: 717 SCVLHNVEEDEKEILLCGHSEKLAIAFGILNTS--PGTIIRVAKNLRVCNDCHLATKFIS 774

Query: 840 MMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +   EI L D +  H FKNG CSCGDYW
Sbjct: 775 KIVDREIILRDVRRFHRFKNGTCSCGDYW 803



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 232/484 (47%), Gaps = 55/484 (11%)

Query: 59  TYINLLQACID---SNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           T ++++ AC +      + + +++HA+     E++ F+   L+++Y K G L  ++ +  
Sbjct: 114 TLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLG 173

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
               R+L TW+ ++ +  ++++  E +E    MV +G+ PD+F    +L AC +      
Sbjct: 174 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 233

Query: 176 GKLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
           GK +H+  +K G +     V ++++ +Y  C +++  RR F+ M ++    WN+MI+GY 
Sbjct: 234 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 293

Query: 235 QIGENDEAHRLFDKM--------------------------CREEIKLGVVTF------- 261
           Q   + EA  LF  M                           R+E   G V         
Sbjct: 294 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 353

Query: 262 ---NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
              N L+  Y++LG+ D+AM +  +ME      D+ TW  MI+G+  +     AL L  +
Sbjct: 354 FVQNTLMDMYSRLGKIDIAMRIFGKMED----RDLVTWNTMITGYVFSEHHEDALLLLHK 409

Query: 319 M-----------SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
           M           S V + PN +T+ + + +C  L ALA G EIH+ A+K     DV VG+
Sbjct: 410 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 469

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           +L++MY+KC  L+ + +VFD I  K+V +WN +I  Y   G   +A +L   M    V P
Sbjct: 470 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 529

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           N +T+  + +    +G  DE + +F  M  +  V+ ++  +  ++    + G+   A  +
Sbjct: 530 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 589

Query: 488 FRKM 491
              M
Sbjct: 590 MNMM 593



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 126/542 (23%), Positives = 235/542 (43%), Gaps = 68/542 (12%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-- 83
           +T L  LC N +L EA+  L  +  +G +    T  ++L AC     +   ++LHA+   
Sbjct: 184 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 243

Query: 84  NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
           N   + + FV + L+ +Y  C  +   R VF+ M +R +  W+AMI  YS+++  +E + 
Sbjct: 244 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 303

Query: 144 LFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
           LF  M +  GL  +      ++ AC   G F   + +H  V+K G+   R V+N+++ +Y
Sbjct: 304 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 363

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-----------CR 251
            + GK+  A R F  M+++D V WN+MI+GY     +++A  L  KM            R
Sbjct: 364 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASR 423

Query: 252 EEIKLGVVTFNILIRSYNQLG-----------------QCDVA--------------MEM 280
             +K   +T   ++ S   L                    DVA              ++M
Sbjct: 424 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 483

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
            +++       +V TW  +I  +  +G   +A+DL + M   GV PN VT  S  +AC+ 
Sbjct: 484 SRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 543

Query: 341 LKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD--KDVYSW 397
              +  G+ I + +    G          ++++  +   ++ A ++ +M+        +W
Sbjct: 544 SGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAW 603

Query: 398 NSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-YIQNGNEDEAVDLFQ 453
           +S++     +        A +  I+++     PNV +  VL++  Y   G  D+A ++ +
Sbjct: 604 SSLLGASRIHNNLEIGEIAAQNLIQLE-----PNVASHYVLLANIYSSAGLWDKATEVRR 658

Query: 454 RMGKNDKVKRNTASW-------NSLIAGYQQLGQKNNALG----VFRKMQSSCFYPNCVT 502
            M +    K    SW       +  +AG     Q     G    ++ +M+   + P+   
Sbjct: 659 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSC 718

Query: 503 IL 504
           +L
Sbjct: 719 VL 720


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 268/851 (31%), Positives = 428/851 (50%), Gaps = 104/851 (12%)

Query: 117  MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
            +  R+   W  ++ + +    +R+ +  +  M+     PD+F FP +L+A     D   G
Sbjct: 290  VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349

Query: 177  KLMHSLVIKLGMSCVRRVR--NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
            K +H+ V K G +    V   NS++ +Y KCG L  AR+ F+ + ++D V+WNSMI+   
Sbjct: 350  KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409

Query: 235  QIGENDEAHRLFDKMCREEI---------------------KLG--------------VV 259
            +  E + +  LF  M  E +                     +LG                
Sbjct: 410  RFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTY 469

Query: 260  TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
            T N L+  Y +LG+ + A  +    +      D+ +W  +IS  +QN R  +AL     M
Sbjct: 470  TNNALVTMYARLGRVNDAKALFGVFDG----KDLVSWNTVISSLSQNDRFEEALMYVYLM 525

Query: 320  SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG-FTDDVLVGNSLINMYSKCEE 378
               GV P+GVT+ S + AC+ L+ L +G EIH  A++ G   ++  VG +L++MY  C++
Sbjct: 526  IVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQ 585

Query: 379  LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM-QESDVPPNVITWNVL-- 435
             +    VFD +  + V  WN+++AGY +  +  +A  LF++M  ES+  PN  T+  +  
Sbjct: 586  PKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLP 645

Query: 436  -------------ISGYI--QNGNEDEAV-----DLFQRMGKNDKVK--------RNTAS 467
                         I GYI  +   +D+ V     D++ RMG+ +  K        R+  S
Sbjct: 646  ACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVS 705

Query: 468  WNSLIAGYQQLGQKNNALGVFRKMQSS------------------CFYPNCVTILSVLPA 509
            WN++I G    G+ ++AL +  +MQ                     F PN VT+++VLP 
Sbjct: 706  WNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPG 765

Query: 510  CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
            CA L A  K KEIH   +++ L   + V ++L+D YAK G +  +  +FD M  +++ITW
Sbjct: 766  CAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITW 825

Query: 570  NSLICGYVLHGFWHAALDLFDQMKSFG------LKPNRGTFLSIILAHSLAGMVDLGKKV 623
            N LI  Y +HG    AL+LF  M + G      ++PN  T+++I  A S +GMVD G  +
Sbjct: 826  NVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHL 885

Query: 624  FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDS-SIWEALLTACRIH 682
            F ++   + + P  +HY+ ++DL GRSG+++EA E I  MP   +    W +LL ACRIH
Sbjct: 886  FHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIH 945

Query: 683  GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
             +++   +A + LF LEP       L+  IY+  G  + AL VRK  +E   R   G  W
Sbjct: 946  QSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCSW 1005

Query: 743  IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISG 797
            IE  + V+ F++G  S   S  L+ +L+ + + +        +      +++EEKE +  
Sbjct: 1006 IEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRKEGYVPDISCVLHNVDDEEKETMLC 1065

Query: 798  IHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF 857
             HSE+LA+AF L+ +     TIR+ KN+R+C  CH   K +S +   EI L D +  HHF
Sbjct: 1066 GHSERLAIAFGLLNTPPGT-TIRVAKNLRVCNDCHVATKIISKIVDREIILRDVRRFHHF 1124

Query: 858  KNGQCSCGDYW 868
             NG CSCGDYW
Sbjct: 1125 ANGTCSCGDYW 1135



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 225/498 (45%), Gaps = 66/498 (13%)

Query: 59  TYINLLQACID-SNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T +++  AC      + L +++HA+     ++  +    L+++YA+ G ++DA+ +F   
Sbjct: 435 TLVSVAHACSHVRGGVRLGKQVHAYTLRNGDLRTYTNNALVTMYARLGRVNDAKALFGVF 494

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             ++L +W+ +I + S++ R+ E +   +LM+ DG+ PD      +L AC        G+
Sbjct: 495 DGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGR 554

Query: 178 LMHSLVIKLGMSCVRR-VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
            +H   ++ G       V  +++ +Y  C +    R  F+ +  +    WN++++GY + 
Sbjct: 555 EIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARN 614

Query: 237 GENDEAHRLFDKMCRE-EIKLGVVTF---------------------------------- 261
             +D+A RLF +M  E E      TF                                  
Sbjct: 615 EFDDQALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYV 674

Query: 262 -NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM- 319
            N L+  Y+++G+ +++  +  RM       D+ +W  MI+G    GR   AL+L  EM 
Sbjct: 675 QNALMDMYSRMGRVEISKTIFGRMNKR----DIVSWNTMITGCIVCGRYDDALNLLHEMQ 730

Query: 320 ---------SFV------GV--MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
                    +FV      GV   PN VT+ + +  C  L AL  G EIH+ AVK     D
Sbjct: 731 RRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMD 790

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V VG++L++MY+KC  L  A RVFD +  ++V +WN +I  Y   G   +A ELF  M  
Sbjct: 791 VAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTA 850

Query: 423 SD------VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
                   + PN +T+  + +    +G  DE + LF  M  +  V+     +  L+    
Sbjct: 851 GGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLG 910

Query: 477 QLGQKNNALGVFRKMQSS 494
           + G+   A  +   M S+
Sbjct: 911 RSGRVKEAYELINTMPSN 928



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 117/510 (22%), Positives = 222/510 (43%), Gaps = 74/510 (14%)

Query: 26   DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
            +T +  L  N R  EA+  +  +   G +    T  ++L AC     + + R++H +   
Sbjct: 503  NTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALR 562

Query: 86   VTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
              ++  + FV T L+ +Y  C      R VF+ +  R +  W+A++  Y+R++   + + 
Sbjct: 563  NGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALR 622

Query: 144  LFFLMVQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
            LF  M+ +  F P+   F  +L AC  C  F   + +H  ++K G    + V+N+++ +Y
Sbjct: 623  LFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMY 682

Query: 203  VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF- 261
             + G++  ++  F  M+++D V+WN+MI+G    G  D+A  L  +M R + + G  TF 
Sbjct: 683  SRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFV 742

Query: 262  ----------------------------------NILIRSYNQLGQCDVA-----MEMVK 282
                                               I   +  Q    DVA     ++M  
Sbjct: 743  DYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYA 802

Query: 283  RMESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVG------VMPN 327
            +   L +   VF         TW  +I  +  +G+  +AL+LF+ M+  G      + PN
Sbjct: 803  KCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPN 862

Query: 328  GVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
             VT  +  +AC+    +  G+ + H++    G          L+++  +   ++ A  + 
Sbjct: 863  EVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELI 922

Query: 387  DMIKD--KDVYSWNSMIAGYC---QAGYCGK--AYELFIKMQESDVPPNVITWNVLISG- 438
            + +      V +W+S++ G C   Q+   G+  A  LF+      + PNV +  VL+S  
Sbjct: 923  NTMPSNLNKVDAWSSLL-GACRIHQSVEFGEIAAKHLFV------LEPNVASHYVLMSNI 975

Query: 439  YIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
            Y   G  D+A+ + ++M +    K    SW
Sbjct: 976  YSSAGLWDQALGVRKKMKEMGVRKEPGCSW 1005


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 253/762 (33%), Positives = 402/762 (52%), Gaps = 53/762 (6%)

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE-AGK 177
           + ++  W+  I +Y R  R  E + +F  M +      + +    L+     G+FE A K
Sbjct: 61  DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRN----GEFELARK 116

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
           L   +  +  +S      N ++  YV+   L  AR  FE M E+D  +WN+M+SGY Q G
Sbjct: 117 LFDEMPERDLVSW-----NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNG 171

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
             D+A  +FD+M  +      V++N L+ +Y Q  + + A  + K  E+  +     +W 
Sbjct: 172 CVDDARSVFDRMPEKND----VSWNALLSAYVQNSKMEEACMLFKSRENWALV----SWN 223

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           C++ GF +  +  +A   F  M+   V+     IT    +    +A  +  E        
Sbjct: 224 CLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE-------- 275

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
               DV    ++++ Y +   +E A  +FD + +++  SWN+M+AGY Q      A ELF
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF 335

Query: 418 IKMQESDVPP--NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
                 DV P  NV TWN +I+GY Q G   EA +LF +M K D V     SW ++IAGY
Sbjct: 336 ------DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV-----SWAAMIAGY 384

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
            Q G    AL +F +M+      N  +  S L  CA +VA    K++HG +++   E+  
Sbjct: 385 SQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGC 444

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            V N+L+  Y K G+I  +  +F  M+ KDI++WN++I GY  HGF   AL  F+ MK  
Sbjct: 445 FVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKRE 504

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           GLKP+  T ++++ A S  G+VD G++ F ++T+ Y ++P  +HY+ M+DL GR+G LE+
Sbjct: 505 GLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLED 564

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A   +++MP EPD++IW  LL A R+HGN +LA  A +++F +EP +  +  L+  +YA 
Sbjct: 565 AHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYAS 624

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN 775
            G+  D  K+R   R+   +   G  WIE++N  +TF  G       D ++++L    E 
Sbjct: 625 SGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFL----EE 680

Query: 776 VTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIR 826
           +  R   +G           +EEEEKE +   HSE+LA+A+ ++  S     IR++KN+R
Sbjct: 681 LDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSG-RPIRVIKNLR 739

Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +C  CH   KY++ +    I L D+   HHFK+G CSCGDYW
Sbjct: 740 VCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 226/479 (47%), Gaps = 55/479 (11%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           +++  + + ++  AR+L     ++ E DV     +LS YA+ GC+DDAR VF+ M E+N 
Sbjct: 132 MIKGYVRNRNLGKAREL---FEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKND 188

Query: 123 YTWSAMIGAYSRDQRWREVVELF-----FLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            +W+A++ AY ++ +  E   LF     + +V        F+  K +         EA +
Sbjct: 189 VSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKI--------VEARQ 240

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
              S+ ++  +S      N+++  Y + GK+  AR+ F+    +D   W +M+SGY Q  
Sbjct: 241 FFDSMNVRDVVSW-----NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNR 295

Query: 238 ENDEAHRLFDKMC-REEIKL--------------------------GVVTFNILIRSYNQ 270
             +EA  LFDKM  R E+                             V T+N +I  Y Q
Sbjct: 296 MVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQ 355

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G+   A  +  +M       D  +W  MI+G++Q+G + +AL LF +M   G   N  +
Sbjct: 356 CGKISEAKNLFDKMPK----RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSS 411

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
            +SA+S C D+ AL +G ++H   VK G+     VGN+L+ MY KC  +E A  +F  + 
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 471

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
            KD+ SWN+MIAGY + G+   A   F  M+   + P+  T   ++S     G  D+   
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
            F  M ++  V  N+  +  ++    + G   +A  + + M    F P+     ++L A
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP---FEPDAAIWGTLLGA 587



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 3/213 (1%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLL 98
           EA+ +   +  +G ++ R+++ + L  C D  ++ L ++LH  L     E   FV   LL
Sbjct: 392 EALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALL 451

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +Y KCG +++A ++F++M  +++ +W+ MI  YSR       +  F  M ++GL PDD 
Sbjct: 452 LMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 511

Query: 159 LFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
               +L AC + G  + G+   +++    G+    +    ++ +  + G L  A    ++
Sbjct: 512 TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKN 571

Query: 218 MD-EKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
           M  E D   W +++      G  + A    DK+
Sbjct: 572 MPFEPDAAIWGTLLGASRVHGNTELAETAADKI 604


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  407 bits (1047), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 254/795 (31%), Positives = 395/795 (49%), Gaps = 88/795 (11%)

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           E +V    K ++ + + G + DA  +F  M  R+  T++AM+  YS + R      LF  
Sbjct: 35  EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRA 94

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV-----LAVY 202
           + +    PD++ +  +L A           +  SL    G+     VR+SV     ++ +
Sbjct: 95  IPR----PDNYSYNTLLHALA---------VSSSLADARGLFDEMPVRDSVTYNVMISSH 141

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
              G +  AR +F+   EKD V+WN M++ Y + G  +EA  LF+       +   +++N
Sbjct: 142 ANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS----RTEWDAISWN 197

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            L+  Y Q G+   A E+  RM       DV +W  M+SG+A+ G   +A  LF      
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARRLFDAAP-- 251

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
                                                  DV    ++++ Y++   LE A
Sbjct: 252 -------------------------------------VRDVFTWTAVVSGYAQNGMLEEA 274

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
            RVFD + +++  SWN+M+A Y Q     +A ELF  M       NV +WN +++GY Q 
Sbjct: 275 RRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR----NVASWNTMLTGYAQA 330

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G  +EA  +F  M + D V     SW +++A Y Q G     L +F +M     + N   
Sbjct: 331 GMLEEAKAVFDTMPQKDAV-----SWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSA 385

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
              VL  CA + A     ++HG ++R        V N+L+  Y K GN+  +R  F+ M 
Sbjct: 386 FACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEME 445

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            +D+++WN++I GY  HGF   AL++FD M++   KP+  T + ++ A S +G+V+ G  
Sbjct: 446 ERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS 505

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F S+   + +    EHY+ MIDL GR+G+L EA + ++DMP EPDS++W ALL A RIH
Sbjct: 506 YFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 565

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
            N +L   A E++F+LEP +  +  L+  IYA  GK  DA K+R +  E   +   G  W
Sbjct: 566 RNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSW 625

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKE 793
           IEV+N V+TF  G       + +Y++L    E++  R   +G           +EEEEKE
Sbjct: 626 IEVQNKVHTFSAGDCVHPEKEKIYAFL----EDLDMRMKKAGYVSATDMVLHDVEEEEKE 681

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
            +   HSEKLA+A+ ++        IR++KN+R+C  CH   KY+S +    I L DS  
Sbjct: 682 HMLKYHSEKLAVAYGILNIPPG-RPIRVIKNLRVCGDCHNAFKYISAIEGRLILLRDSNR 740

Query: 854 LHHFKNGQCSCGDYW 868
            HHF+ G CSCGDYW
Sbjct: 741 FHHFRGGSCSCGDYW 755



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 217/453 (47%), Gaps = 26/453 (5%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           TY  ++ +  +   + LAR    + +L  E D      +L+ Y + G +++AR +F    
Sbjct: 133 TYNVMISSHANHGLVSLARH---YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT 189

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGK 177
           E +  +W+A++  Y +  +  E  ELF  M       D   +  ++      GD  EA +
Sbjct: 190 EWDAISWNALMSGYVQWGKMSEARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARR 245

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
           L  +  ++   +       +V++ Y + G L  ARR F++M E++ V+WN+M++ Y Q  
Sbjct: 246 LFDAAPVRDVFTWT-----AVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRR 300

Query: 238 ENDEAHRLFDKM-CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
             DEA  LF+ M CR      V ++N ++  Y Q G  + A  +   M       D  +W
Sbjct: 301 MMDEAKELFNMMPCRN-----VASWNTMLTGYAQAGMLEEAKAVFDTMPQ----KDAVSW 351

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             M++ ++Q G + + L LF EM   G   N       +S C D+ AL  GM++H   ++
Sbjct: 352 AAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIR 411

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G+     VGN+L+ MY KC  +E A   F+ ++++DV SWN+MIAGY + G+  +A E+
Sbjct: 412 AGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEI 471

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F  M+ +   P+ IT   +++    +G  ++ +  F  M  +  V      +  +I    
Sbjct: 472 FDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLG 531

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           + G+   A  + + M    F P+     ++L A
Sbjct: 532 RAGRLAEAHDLMKDMP---FEPDSTMWGALLGA 561



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 149/288 (51%), Gaps = 8/288 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           NG L EA  V D++  + A     ++  ++ A I    +  A++L    N++   +V   
Sbjct: 268 NGMLEEARRVFDAMPERNAV----SWNAMVAAYIQRRMMDEAKEL---FNMMPCRNVASW 320

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             +L+ YA+ G L++A+ VF+ M +++  +W+AM+ AYS+     E ++LF  M + G +
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            +   F  +L  C +    E G  +H  +I+ G      V N++LA+Y KCG +  AR  
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           FE M+E+D V+WN+MI+GY + G   EA  +FD M     K   +T   ++ + +  G  
Sbjct: 441 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           +  +     M    G+T     +TCMI    + GR ++A DL K+M F
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 548



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 97/243 (39%), Gaps = 43/243 (17%)

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           LE  +   N  I  + ++G +  +  +F  M  +   T+N+++ GY  +G    A  LF 
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 591 QMK----------------SFGLKPNRG-----------TFLSIILAHSLAGMVDLGKKV 623
            +                 S  L   RG           T+  +I +H+  G+V L +  
Sbjct: 94  AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHY 153

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           F    E   +      ++ M+  Y R+G++EEA         E D+  W AL++     G
Sbjct: 154 FDLAPEKDAV-----SWNGMLAAYVRNGRVEEARGLFNSR-TEWDAISWNALMSGYVQWG 207

Query: 684 NIDLAVLAIERLFDLEPG-DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
            +  A      LFD  PG DV+   +++  YA  G   D ++ R+L      R+ F   W
Sbjct: 208 KMSEA----RELFDRMPGRDVVSWNIMVSGYARRG---DMVEARRLFDAAPVRDVF--TW 258

Query: 743 IEV 745
             V
Sbjct: 259 TAV 261


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 260/781 (33%), Positives = 394/781 (50%), Gaps = 86/781 (11%)

Query: 163  ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
            +LQ C      E GK +HS++I  G+S    +   ++ +YV CG L+  R+ F+ +    
Sbjct: 375  VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 434

Query: 223  GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV----TFNILIRSYNQLGQCDVAM 278
               WN ++S Y +IG   E+  LF KM     KLGVV    TF  +++ +  LG+     
Sbjct: 435  VFLWNLLMSEYAKIGNFRESVSLFKKM----QKLGVVGNCYTFTCVLKCFAALGKVKECK 490

Query: 279  EMVKRMESLGI-------------------------------TPDVFTWTCMISGFAQNG 307
             +   +  LG                                 PDV +W  MI+G   NG
Sbjct: 491  RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNG 550

Query: 308  RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
             +   L++F +M  +GV  +  T+ S + A  ++  L++G  +H   VK  F+++V+  N
Sbjct: 551  FSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSN 610

Query: 368  SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
            +L++MYSKC  L  A  VF  + D  + SW S IA Y + G    A  LF +MQ   V P
Sbjct: 611  TLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRP 670

Query: 428  NVIT-----------------------------------WNVLISGYIQNGNEDEAVDLF 452
            ++ T                                    N LI+ Y + G+ +EA  +F
Sbjct: 671  DIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVF 730

Query: 453  QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
             ++   D V     SWN++I GY Q    N AL +F  MQ   F P+ +T+  VLPACA 
Sbjct: 731  SKIPVKDIV-----SWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAG 784

Query: 513  LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 572
            L A +K +EIHG +LRR   S L V  +L+D YAK G +V ++ +FD +  KD+I+W  +
Sbjct: 785  LAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVM 844

Query: 573  ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQ 632
            I GY +HGF + A+  F++M+  G++P+  +F  I+ A S +G+++ G K F S+     
Sbjct: 845  IAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECG 904

Query: 633  IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAI 692
            + P +EHY+ ++DL  R G L +A +FIE MPI+PD++IW  LL+ CRIH ++ LA    
Sbjct: 905  VEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVA 964

Query: 693  ERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTF 752
            E +F+LEP +     ++  +YA   K E+  K+RK  ++   + + G  WIEV      F
Sbjct: 965  EHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIF 1024

Query: 753  VTGGWSESYS---DLLYSWLQNVPENVTARSSHSGLCIEEE--EKEEISGIHSEKLALAF 807
            V G      +   D+L   L    +N    S    + I E+  EKE I   HSEK A+AF
Sbjct: 1025 VAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDDMEKEMIQCGHSEKSAMAF 1084

Query: 808  ALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
             ++       T+R+ KN R+C  CHE  K++S     EI L DS   HHFK+G CSC D 
Sbjct: 1085 GILNLPPG-RTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRDSNRFHHFKDGLCSCRDA 1143

Query: 868  W 868
            +
Sbjct: 1144 F 1144



 Score =  219 bits (558), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 173/665 (26%), Positives = 303/665 (45%), Gaps = 76/665 (11%)

Query: 17  TKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA 76
           T  S  + ++  ++  C  G L  AI +L    ++  ++  N+Y ++LQ C +  S+   
Sbjct: 331 TTHSVTQNQNAKINKFCEMGDLRNAIELL--TKSKSYELGLNSYCSVLQLCAEKKSLEDG 388

Query: 77  RKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           +++H+  ++    ID  +  KL+ +Y  CG L   R++F+ +    ++ W+ ++  Y++ 
Sbjct: 389 KRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKI 448

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
             +RE V LF  M + G+  + + F  +L+     G  +  K +H  V+KLG      V 
Sbjct: 449 GNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVV 508

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           NS++A Y K G +  A   F+ + E D V+WNSMI+G    G +     +F +M    ++
Sbjct: 509 NSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVE 568

Query: 256 LGVVTF-----------------------------------NILIRSYNQLGQCDVAMEM 280
           + + T                                    N L+  Y++ G  + A E+
Sbjct: 569 VDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEV 628

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
             +M    I     +WT  I+ + + G  S A+ LF EM   GV P+  T+TS + AC  
Sbjct: 629 FVKMGDTTIV----SWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACAC 684

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
             +L  G ++HS  +K G   ++ V N+LINMY+KC  +E A  VF  I  KD+ SWN+M
Sbjct: 685 SSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTM 744

Query: 401 IAGYCQAGYCGKAYELFIKMQESDVPPNV--------------------ITWNVLISGYI 440
           I GY Q     +A ELF+ MQ+   P ++                    I  ++L  GY 
Sbjct: 745 IGGYSQNSLPNEALELFLDMQKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF 804

Query: 441 QNGNEDEA-VDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            + +   A VD++ + G         +   K++  SW  +IAGY   G  N A+  F +M
Sbjct: 805 SDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEM 864

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGN 550
           + +   P+  +   +L AC++    N+  +    +     +E  L     ++D  A+ GN
Sbjct: 865 RIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGN 924

Query: 551 IVYSRTIFDGMSSK-DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
           +  +    + M  K D   W  L+ G  +H     A  + + +  F L+P+   +  ++L
Sbjct: 925 LSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHI--FELEPDNTRYY-VVL 981

Query: 610 AHSLA 614
           A+  A
Sbjct: 982 ANVYA 986



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 107/248 (43%), Gaps = 16/248 (6%)

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
           T + N+ I  + ++G   NA+ +  K +S     N  +  SVL  CA   +    K +H 
Sbjct: 336 TQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLN--SYCSVLQLCAEKKSLEDGKRVHS 393

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
            ++   +     +   L+  Y   G++V  R IFD + +  +  WN L+  Y   G +  
Sbjct: 394 VIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRE 453

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMI 644
           ++ LF +M+  G+  N  TF  ++   +  G V   K+V   + +           +++I
Sbjct: 454 SVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLK-LGFGSNTAVVNSLI 512

Query: 645 DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVL 704
             Y + G +E A    +++  EPD   W +++  C ++G            F     ++ 
Sbjct: 513 AAYFKFGGVESAHNLFDELS-EPDVVSWNSMINGCVVNG------------FSGNGLEIF 559

Query: 705 IQRLILQI 712
           IQ LIL +
Sbjct: 560 IQMLILGV 567


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 267/792 (33%), Positives = 414/792 (52%), Gaps = 74/792 (9%)

Query: 84  NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMI-GAYSRDQRWREVV 142
           +L T+ D+      ++ + + G  D A  +F  M  R+  +W+AMI G  S D+      
Sbjct: 42  SLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDK------ 95

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
             F+L  Q        LF K+        D  +  +M S        CVR  RN      
Sbjct: 96  --FYLARQ--------LFEKMPTR-----DLVSWNVMIS-------GCVR-YRN------ 126

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CREEIKLGVVTF 261
                L  AR  F+ M E+D V+WN+M+SGY Q G   EA  +FD+M C+  I     ++
Sbjct: 127 -----LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSI-----SW 176

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N ++ +Y Q G+    +E  +R+       ++ +W CM+ G+ +  R   A  +F  M  
Sbjct: 177 NGMLAAYVQNGR----IEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMP- 231

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
                + V+  + IS       L   +E   L  +     DV    ++++ Y +   L+ 
Sbjct: 232 ---ERDEVSWNTMISGYAQNGEL---LEAQRL-FEESPVRDVFTWTAMVSGYVQNGMLDE 284

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
           A RVFD + +K+  SWN++IAGY Q     +A ELF    E+    NV +WN +I+GY Q
Sbjct: 285 ARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELF----EAMPCQNVSSWNTMITGYAQ 340

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
           NG+  +A + F RM + D +     SW ++IAGY Q G    AL +F +M+      N  
Sbjct: 341 NGDIAQARNFFDRMPQRDSI-----SWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRS 395

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           T  S L  CA + A    K++HG V++  LES   V N+L+  Y K GNI  +  +F+G+
Sbjct: 396 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 455

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
             K++++WN++I GY  HGF   AL LF+ MK  G+ P+  T + ++ A S  G+VD G 
Sbjct: 456 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGT 515

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
           + F S+T+ Y I    +HY+ MIDL GR+G+L++A   +++MP EPD++ W ALL A RI
Sbjct: 516 EYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRI 575

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           HGN +L   A + +F++EP +  +  L+  +YA  G+  D  ++R   R+   +   G  
Sbjct: 576 HGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYS 635

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS--SHSGLC---IEEEEKEEIS 796
           W+EV+N ++TF  G       D +Y++L+ +   +      S + L    +EEEEK  + 
Sbjct: 636 WVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHML 695

Query: 797 GIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHH 856
             HSEKLA+AF ++ +  A   IR++KN+R+C  CH   K++S +    I L DS   HH
Sbjct: 696 KYHSEKLAVAFGIL-AIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHH 754

Query: 857 FKNGQCSCGDYW 868
           F  GQCSCGDYW
Sbjct: 755 FNGGQCSCGDYW 766



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 236/478 (49%), Gaps = 53/478 (11%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           ++  C+   ++  AR L    + + E DV     +LS YA+ G + +A+E+F++M  +N 
Sbjct: 117 MISGCVRYRNLRAARLL---FDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNS 173

Query: 123 YTWSAMIGAYSRDQRWREVVELF----------------------FLMVQDGLFP----- 155
            +W+ M+ AY ++ R  +   LF                       L+   G+F      
Sbjct: 174 ISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPER 233

Query: 156 DDFLFPKILQACGNCGD-FEAGKLMHSLVIKLGMSCVRRV--RNSVLAVYVKCGKLIWAR 212
           D+  +  ++      G+  EA +L          S VR V    ++++ YV+ G L  AR
Sbjct: 234 DEVSWNTMISGYAQNGELLEAQRLFEE-------SPVRDVFTWTAMVSGYVQNGMLDEAR 286

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CREEIKLGVVTFNILIRSYNQL 271
           R F+ M EK+ V+WN++I+GY Q    D+A  LF+ M C+      V ++N +I  Y Q 
Sbjct: 287 RVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQN-----VSSWNTMITGYAQN 341

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           G    A     RM       D  +W  +I+G+AQ+G   +AL LF EM   G   N  T 
Sbjct: 342 GDIAQARNFFDRMPQR----DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTF 397

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           TS +S C ++ AL +G ++H   VK G      VGN+L+ MY KC  ++ A  VF+ I++
Sbjct: 398 TSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEE 457

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
           K+V SWN+MIAGY + G+  +A  LF  M+++ + P+ +T   ++S     G  D+  + 
Sbjct: 458 KEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEY 517

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           F  M ++  +  N+  +  +I    + G+ ++A  + + M    F P+  T  ++L A
Sbjct: 518 FYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMP---FEPDAATWGALLGA 572



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 215/492 (43%), Gaps = 104/492 (21%)

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
           K   SL    D+  W   I+   +NG+   AL LF  M       + ++  + IS C   
Sbjct: 38  KTTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMP----RRSSISWNAMISGCLSN 93

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
               +  ++     KM  T D++  N +I+   +   L AA  +FD + ++DV SWN+M+
Sbjct: 94  DKFYLARQLFE---KMP-TRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAML 149

Query: 402 AGYCQAGYCGKAYELFIKMQESDVP-PNVITWNVLISGYIQNGNEDEAVDLFQR------ 454
           +GY Q GY  +A E+F +M     P  N I+WN +++ Y+QNG  ++A  LF+       
Sbjct: 150 SGYAQNGYVKEAKEIFDEM-----PCKNSISWNGMLAAYVQNGRIEDARRLFESKADWEL 204

Query: 455 ------MG---KNDKV-----------KRNTASWNSLIAGYQQLGQ-------------- 480
                 MG   K +++           +R+  SWN++I+GY Q G+              
Sbjct: 205 ISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVR 264

Query: 481 -------------KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
                        +N  L   R++       N V+  +++         ++ +E+   + 
Sbjct: 265 DVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMP 324

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
            +++ S     N++I  YA++G+I  +R  FD M  +D I+W ++I GY   G+   AL 
Sbjct: 325 CQNVSS----WNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALH 380

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV----------------------FC 625
           LF +MK  G + NR TF S +   +    ++LGK+V                      +C
Sbjct: 381 LFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYC 440

Query: 626 ---SITECYQIIPMIEH-----YSAMIDLYGRSGKLEEAMEFIEDMP---IEPDSSIWEA 674
              +I + Y +   IE      ++ MI  Y R G  +EA+   E M    I PD      
Sbjct: 441 KCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVG 500

Query: 675 LLTACRIHGNID 686
           +L+AC   G +D
Sbjct: 501 VLSACSHTGLVD 512



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 170/372 (45%), Gaps = 23/372 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           NG L+EA  V D +  + +     ++  ++   +    +  AR+L   +      +V   
Sbjct: 279 NGMLDEARRVFDGMPEKNSV----SWNAIIAGYVQCKRMDQARELFEAMPCQ---NVSSW 331

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             +++ YA+ G +  AR  F+ M +R+  +W+A+I  Y++     E + LF  M +DG  
Sbjct: 332 NTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGER 391

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            +   F   L  C      E GK +H  V+K G+     V N++L +Y KCG +  A   
Sbjct: 392 LNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 451

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           FE ++EK+ V+WN+MI+GY + G   EA  LF+ M +  I    VT   ++ + +  G  
Sbjct: 452 FEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLV 511

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
           D   E    M +  GIT +   +TCMI    + GR   A +L K M F    P+  T  +
Sbjct: 512 DKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPF---EPDAATWGA 568

Query: 334 AISACTDLKALAMGMEIHSLAVKMGF---TDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
            + A      +    E+   A KM F    D+  +   L N+Y+         R+   ++
Sbjct: 569 LLGASR----IHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMR 624

Query: 391 DKDV-----YSW 397
           D+ V     YSW
Sbjct: 625 DRGVKKVPGYSW 636


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 249/761 (32%), Positives = 399/761 (52%), Gaps = 55/761 (7%)

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           ++  W+  I +Y R  R  E + +F  M +      + +    L+     G+FE  +++ 
Sbjct: 58  DIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRN----GEFELARMLF 113

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
             + +  +       N ++  YV+   L  AR  FE M E+D  +WN+++SGY Q G  D
Sbjct: 114 DEMPERDLVSW----NVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVD 169

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
           +A R+FD+M  +      V++N L+ +Y Q  + + A  +    E+  +     +W C++
Sbjct: 170 DARRVFDRMPEKND----VSWNALLSAYVQNSKLEEACVLFGSRENWALV----SWNCLL 221

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT--SAISACTDLKALAMGMEIHSLAVKMG 358
            GF +  +  +A   F  M    V+     IT  +      + + L     +H       
Sbjct: 222 GGFVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVH------- 274

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              DV    ++++ Y +   +E A  +FD + +++  SWN+M+AGY Q      A ELF 
Sbjct: 275 ---DVFTWTAMVSGYIQNRMVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELF- 330

Query: 419 KMQESDVPP--NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
                DV P  NV TWN +I+GY Q G   EA +LF +M K D V     SW ++IAGY 
Sbjct: 331 -----DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV-----SWAAMIAGYS 380

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           Q G    AL +F  M+      N  +  S L  CA +VA    K++HG +++   E+   
Sbjct: 381 QSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCF 440

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           V N+L+  Y K G+I  +  +F  M+ KDI++WN++I GY  HGF   AL  F+ MK  G
Sbjct: 441 VGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREG 500

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           LKP+  T ++++ A S  G+VD G++ F ++T+ Y + P  +HY+ M+DL GR+G LEEA
Sbjct: 501 LKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEA 560

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
              +++MP EPD++IW  LL A R+HGN +LA  A +++F +EP +  +  L+  +YA  
Sbjct: 561 HNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASS 620

Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV 776
           G+  D  K+R   R+   +   G  WIE++N  +TF  G       D ++++L    E++
Sbjct: 621 GRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFL----EDL 676

Query: 777 TARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRM 827
             R   +G           +EEEEKE +   HSE+LA+A+ ++  S     IR++KN+R+
Sbjct: 677 DLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSG-RPIRVIKNLRV 735

Query: 828 CVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           C  CH   KY++ +    I L D+   HHFK+G CSCGDYW
Sbjct: 736 CEDCHNAIKYMAKVTGRLIILRDNNRFHHFKDGSCSCGDYW 776



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 224/479 (46%), Gaps = 55/479 (11%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           +++  + + ++  AR+L      + E DV     +LS YA+ GC+DDAR VF+ M E+N 
Sbjct: 127 MIKGYVRNRNLGKAREL---FERMPERDVCSWNTILSGYAQNGCVDDARRVFDRMPEKND 183

Query: 123 YTWSAMIGAYSRDQRWREVVELF-----FLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            +W+A++ AY ++ +  E   LF     + +V        F+  K +         EA +
Sbjct: 184 VSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKI--------VEARQ 235

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
              S+ ++  +S      N+++  Y + G++  AR+ F+     D   W +M+SGY Q  
Sbjct: 236 FFDSMKVRDVVSW-----NTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNR 290

Query: 238 ENDEAHRLFDKMC-REEIKL--------------------------GVVTFNILIRSYNQ 270
             +EA  LFD+M  R E+                             V T+N +I  Y Q
Sbjct: 291 MVEEARELFDRMPERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWNTMITGYAQ 350

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G+   A  +  +M       D  +W  MI+G++Q+G + +AL LF  M   G   N  +
Sbjct: 351 CGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSS 406

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
            +SA+S C D+ AL +G ++H   VK G+     VGN+L+ MY KC  +E A  +F  + 
Sbjct: 407 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 466

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
            KD+ SWN+MIAGY + G+  +A   F  M+   + P+  T   ++S     G  D+   
Sbjct: 467 GKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 526

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
            F  M ++  V+ N+  +  ++    + G    A  + + M    F P+     ++L A
Sbjct: 527 YFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMP---FEPDAAIWGTLLGA 582



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 106/218 (48%), Gaps = 3/218 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           +G   EA+ +   +  +G ++ R+++ + L  C D  ++ L ++LH  L     E   FV
Sbjct: 382 SGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFV 441

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              LL +Y KCG +++A ++F++M  +++ +W+ MI  YSR     E +  F  M ++GL
Sbjct: 442 GNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGL 501

Query: 154 FPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PDD     +L AC + G  + G+   H++    G+    +    ++ +  + G L  A 
Sbjct: 502 KPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAH 561

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
              ++M  E D   W +++      G  + A    DK+
Sbjct: 562 NLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKI 599



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 14/154 (9%)

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           L +S +S +   N  I +Y ++G    +  +F  M     +++N++I GY+ +G +  A 
Sbjct: 51  LPKSGDSDIKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELAR 110

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE--HYSAMI 644
            LFD+M      P R      ++        +LGK       E ++ +P  +   ++ ++
Sbjct: 111 MLFDEM------PERDLVSWNVMIKGYVRNRNLGK-----ARELFERMPERDVCSWNTIL 159

Query: 645 DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
             Y ++G +++A    + MP + D S W ALL+A
Sbjct: 160 SGYAQNGCVDDARRVFDRMPEKNDVS-WNALLSA 192


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 268/878 (30%), Positives = 434/878 (49%), Gaps = 87/878 (9%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           R T + +L  C +S ++     +H+  + +  + D+++   LL +YAKC  +  AR +F+
Sbjct: 17  RETCLQVLSLC-NSQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFD 75

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
           +M  R++ +W+ ++ A++R++   E ++LF +M+  G  P++F     L++C   G+FE 
Sbjct: 76  EMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEF 135

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +H+ V+KLG+     +  +++ +Y KC   +   +    + + D V+W +MIS   +
Sbjct: 136 GAKIHASVVKLGLELNHVLGTTLVDLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVE 195

Query: 236 IGENDEAHRLFDKMCREEIK---------LGVVTFNILIRSY-----NQLGQCDVAMEMV 281
             +  EA +L+ KM    I          LG+ +F  L + Y     +QL    V M ++
Sbjct: 196 TSKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLM 255

Query: 282 ------------KRMESL----GITP--DVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
                       +RME        TP  DV  WT +ISGF QN +  +A++   +M   G
Sbjct: 256 LKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSG 315

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA-A 382
           ++PN  T  S ++A + + +L +G + HS  + +G   D+ VGN+L++MY KC       
Sbjct: 316 ILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNG 375

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---------- 432
            + F  I   +V SW S+IAG+ + G+  ++ +LF +MQ + V PN  T           
Sbjct: 376 VKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKM 435

Query: 433 -------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTAS 467
                                    N L+  Y   G  DEA  +   M   D +     +
Sbjct: 436 KSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDII-----T 490

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           + +L A   Q G    AL V   M +     +  ++ S + A A L      K++H    
Sbjct: 491 YTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSF 550

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           +   E    V NSL+ +Y+K G++  +  +F  ++  D ++WN LI G   +G    AL 
Sbjct: 551 KSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITEPDRVSWNGLISGLASNGLISDALS 610

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
            FD M+  G+KP+  TFLS+I A S   +++ G   F S+ + Y I P ++HY  ++DL 
Sbjct: 611 AFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFYSMEKTYHITPKLDHYVCLVDLL 670

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           GR G+LEEAM  IE MP +PDS I++ LL AC +HGN+ L      R  +L+P D  I  
Sbjct: 671 GRGGRLEEAMGVIETMPFKPDSVIYKTLLNACNLHGNVPLGEDMARRCLELDPCDPAIYL 730

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
           L+  +Y   G P+   K RKL RE   R S  QCW+EVK+ +Y F      +  +D +  
Sbjct: 731 LLASLYDNAGLPDFGDKTRKLMRERGLRRSPRQCWMEVKSKIYLF--SAREKIGNDEINE 788

Query: 768 WLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIG-SSQAPHTIRIVKNIR 826
            L+++   +  R    G   +E E +     HSE+LALAF ++   + AP  IRI KN  
Sbjct: 789 KLESLITEIKNR----GYPYQESEDKL---YHSEQLALAFGVLSVPTLAP--IRINKNSL 839

Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
           +C HCH     ++     EI + D K  H FK+GQCSC
Sbjct: 840 ICTHCHSFIMLLTQFVDREIIVRDRKRFHVFKDGQCSC 877



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 145/661 (21%), Positives = 286/661 (43%), Gaps = 89/661 (13%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL 98
           EA+ + D +   G      T  + L++C          K+HA  + L  E++  + T L+
Sbjct: 100 EALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLV 159

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +Y KC C  +  ++   +++ ++ +W+ MI +     +W E ++L+  M++ G++P++F
Sbjct: 160 DLYTKCDCTVEPHKLLAFVKDGDVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNEF 219

Query: 159 LFPKILQACGNCGDFEA-GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
            F K+L      G  +  GK++HS +I  G+     ++ +++ +Y KC ++  A +  + 
Sbjct: 220 TFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLKTAIICMYAKCRRMEDAIKVSQQ 279

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
             + D   W S+ISG+ Q  +  EA      M    I     T+  L+ + + +   ++ 
Sbjct: 280 TPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELG 339

Query: 278 MEMVKRMESLGIT--------------------------------PDVFTWTCMISGFAQ 305
            +   R+  +G+                                 P+V +WT +I+GFA+
Sbjct: 340 EQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAE 399

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
           +G   +++ LF EM   GV PN  T+++ + AC+ +K++    ++H   +K     D+ V
Sbjct: 400 HGFEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAV 459

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
           GN+L++ Y+     + A  V  M+  +D+ ++ ++ A   Q G    A  +   M   +V
Sbjct: 460 GNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEV 519

Query: 426 PPNVITW-----------------------------------NVLISGYIQNGNEDEAVD 450
             +  +                                    N L+  Y + G+  +A  
Sbjct: 520 KMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYR 579

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +F+ + + D+V     SWN LI+G    G  ++AL  F  M+ +   P+ VT LS++ AC
Sbjct: 580 VFKDITEPDRV-----SWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFAC 634

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNS------LIDTYAKSGNIVYSRTIFDGMSSK 564
           +     N+     G     S+E +  +         L+D   + G +  +  + + M  K
Sbjct: 635 SQGSLLNQ-----GLDYFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFK 689

Query: 565 -DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSLAGMVDLGKK 622
            D + + +L+    LHG      D+    +   L P +   +L +   +  AG+ D G K
Sbjct: 690 PDSVIYKTLLNACNLHGNVPLGEDM--ARRCLELDPCDPAIYLLLASLYDNAGLPDFGDK 747

Query: 623 V 623
            
Sbjct: 748 T 748



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 150/352 (42%), Gaps = 41/352 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFV 93
           N ++ EA+  L  +   G      TY +LL A     S+ L  + H+ + +V  E D++V
Sbjct: 298 NSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYV 357

Query: 94  KTKLLSVYAKCG-CLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              L+ +Y KC     +  + F  +   N+ +W+++I  ++      E V+LF  M   G
Sbjct: 358 GNALVDMYMKCSHTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAG 417

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P+ F    IL AC         K +H  +IK  +     V N+++  Y   G    A 
Sbjct: 418 VQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAW 477

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK---------------LG 257
                M+ +D + + ++ +   Q G+++ A R+   MC +E+K               LG
Sbjct: 478 SVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLG 537

Query: 258 VV--------------------TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
           ++                      N L+ SY++ G    A  + K +      PD  +W 
Sbjct: 538 IMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGSMRDAYRVFKDITE----PDRVSWN 593

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            +ISG A NG  S AL  F +M   GV P+ VT  S I AC+    L  G++
Sbjct: 594 GLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLD 645


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 270/764 (35%), Positives = 391/764 (51%), Gaps = 78/764 (10%)

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
            K +H+L++  G      +   ++ +Y   G +  +R  F+ + +KD  AWNSMIS Y  
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 194

Query: 236 IGENDEAHRLFDKMCR-EEIKLGVVTFNILIRSYN-------------QLG---QCDVAM 278
            G   EA   F ++    EI+    TF  ++++               +LG      VA 
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAA 254

Query: 279 EMVKRMESLGITP------------DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            ++      G T             D+ +W  MISG  QNG  +QALD+  EM   G+  
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           N VT+ S +  C  L  ++  M IH   +K G   D+ V N+LINMY+K   LE A + F
Sbjct: 315 NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAF 374

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS--------- 437
             +   DV SWNS+IA Y Q      A+  F+KMQ +   P+++T   L S         
Sbjct: 375 QQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCK 434

Query: 438 ------GYIQNGN---ED-----EAVDLFQRMGKNDKVKR--------NTASWNSLIAGY 475
                 G+I       ED       VD++ ++G  D   +        +  SWN+LI GY
Sbjct: 435 NSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGY 494

Query: 476 QQLGQKNNALGVFRKMQSSC--FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
            Q G  + A+ V+ KM   C    PN  T +S+LPA A++ A  +  +IHG V++ +L  
Sbjct: 495 AQNGLASEAIEVY-KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHL 553

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
            + V   LID Y K G +V + ++F  +  +  +TWN++I  + +HG     L LF +M 
Sbjct: 554 DVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEML 613

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
             G+KP+  TF+S++ A S +G V+ GK  F  + E Y I P ++HY  M+DL GR+G L
Sbjct: 614 DEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYL 672

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIY 713
           E A +FI+DMP++PD+SIW ALL ACRIHGNI+L   A +RLF+++  +V    L+  IY
Sbjct: 673 EMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIY 732

Query: 714 AICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP 773
           A  GK E   KVR L RE   + + G   IEV   V  F TG  S      +Y  L+   
Sbjct: 733 ANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELR--- 789

Query: 774 ENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
             +TA+    G           +EE+EKE I   HSE+LA+AF +I S+     IRI KN
Sbjct: 790 -VLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGII-STPPKSPIRIFKN 847

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +R+C  CH   K++S +   EI + DS   HHFK+G CSCGDYW
Sbjct: 848 LRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 222/463 (47%), Gaps = 52/463 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDV 91
           NG  +EAI     +    +++R +  T+  +L+AC    ++   RK+H +   L  + +V
Sbjct: 195 NGHFHEAIGCFYQLLLV-SEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNV 250

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV   L+ +Y++ G    AR +F+DM  R++ +W+AMI    ++    + +++   M  +
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+  +      IL  C   GD     L+H  VIK G+     V N+++ +Y K G L  A
Sbjct: 311 GIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDA 370

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---------------------- 249
           R+ F+ M   D V+WNS+I+ Y Q  +   AH  F KM                      
Sbjct: 371 RKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQS 430

Query: 250 --CREE-------IKLG-----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP--DV 293
             C+         ++ G     VV  N ++  Y +LG  D A ++ +      I P  DV
Sbjct: 431 RDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFE------IIPVKDV 484

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEIHS 352
            +W  +I+G+AQNG  S+A++++K M     ++PN  T  S + A   + AL  GM+IH 
Sbjct: 485 ISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHG 544

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
             +K     DV V   LI++Y KC  L  A  +F  +  +   +WN++I+ +   G+  K
Sbjct: 545 RVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEK 604

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
             +LF +M +  V P+ +T+  L+S    +G  +E    F+ M
Sbjct: 605 TLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM 647



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 227/521 (43%), Gaps = 61/521 (11%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  NG   +A+ VLD +  +G K+   T +++L  C     I  A  +H + +    E D
Sbjct: 291 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFD 350

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +FV   L+++YAK G L+DAR+ F+ M   ++ +W+++I AY ++         F  M  
Sbjct: 351 LFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQL 410

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG--MSCVRRVRNSVLAVYVKCGKL 208
           +G  PD      +        D +  + +H  +++ G  M  V  + N+V+ +Y K G L
Sbjct: 411 NGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDV-VIGNAVVDMYAKLGLL 469

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--CREEIKLGVVTFNILIR 266
             A + FE +  KD ++WN++I+GY Q G   EA  ++  M  C+E I     T+  ++ 
Sbjct: 470 DSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP-NQGTWVSILP 528

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR------------------ 308
           +Y  +G     M++  R+    +  DVF  TC+I  + + GR                  
Sbjct: 529 AYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT 588

Query: 309 -------------TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
                          + L LF EM   GV P+ VT  S +SAC+    +  G     L  
Sbjct: 589 WNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ 648

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD----KDVYSWNSMIAGYCQAGYCG 411
           + G    +     ++++  +   LE A   +D IKD     D   W +++ G C+  +  
Sbjct: 649 EYGIKPSLKHYGCMVDLLGRAGYLEMA---YDFIKDMPLQPDASIWGALL-GACRI-HGN 703

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                F   +  +V    + + VL+S    N  + E VD  + + +   +K+ T  W+++
Sbjct: 704 IELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKK-TPGWSTI 762

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI---LSVLPA 509
                   + N  + VF     S  +P C  I   L VL A
Sbjct: 763 --------EVNRKVDVFYTGNQS--HPKCKEIYEELRVLTA 793


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  406 bits (1044), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 273/913 (29%), Positives = 436/913 (47%), Gaps = 97/913 (10%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTK 96
             EA+ +  ++  +G      T + +L +C     +     +HA  L      +  V T 
Sbjct: 39  FQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATA 98

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYS-RDQRWREVVELFFLMVQDGLFP 155
           LL++Y KCG L DA+ VFE+M E+N+ TW+AM+G YS +   W+  VELF  M+ +G+  
Sbjct: 99  LLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKA 158

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           +   F  +L +  +      GK +HS V +   S    V  +++  Y KCG L  AR+ F
Sbjct: 159 NVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVF 218

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------------- 261
           + M  +    WNSMIS Y     + EA  +F +M +E  +   VTF              
Sbjct: 219 DGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQ 278

Query: 262 ---------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
                                  LI  Y +    + A ++  RM+      ++ TW+ +I
Sbjct: 279 HGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQ----TNLITWSAII 334

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           + FA +G   +AL  F+ M   G++PN VT  S ++  T    L     IH L  + G  
Sbjct: 335 TAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLD 394

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
           D   + N+L+N+Y +CE  + A  VFD ++  ++ SWNSMI  Y Q      A +LF  M
Sbjct: 395 DTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTM 454

Query: 421 QESDVPPNVITW-----------------------------------NVLISGYIQNGNE 445
           Q+  + P+ + +                                     L++ Y + G  
Sbjct: 455 QQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGEL 514

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           D A  + Q M +     +   +WN LI GY   G+   AL  ++K+Q      + VT +S
Sbjct: 515 DVAEVILQEMDE-----QQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFIS 569

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           VL AC    +  + K IH   +   L+S + V N+L + Y+K G++  +R IFD M  + 
Sbjct: 570 VLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRS 629

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
            ++WN ++  Y  HG     L L  +M+  G+K N  TF+S++ + S AG++  G + F 
Sbjct: 630 AVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFH 689

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
           S+     I    EHY  ++DL GR+GKL+EA ++I  MP+EP    W +LL ACR+  ++
Sbjct: 690 SLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDL 749

Query: 686 DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV 745
           D   LA  +L +L+PG+     ++  IY+  G  ++A K+R+       +   G   I+V
Sbjct: 750 DRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQV 809

Query: 746 KNLVYTFVTGGWSESYSDLLYSWLQN----------VPENVTARSSHSGLCIEEEEKEEI 795
           KN V+ F     S   +  +Y  ++           VP+  T    H    ++EE+KE +
Sbjct: 810 KNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGYVPD--TKMVLHD---VDEEQKESL 864

Query: 796 SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
              HSEKLA+AF LI + +   ++ I KN+R+C  CH   K++S +   EI + D+   H
Sbjct: 865 LAYHSEKLAIAFGLISTPETS-SLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFH 923

Query: 856 HFKNGQCSCGDYW 868
           HF++G CSC DYW
Sbjct: 924 HFRDGSCSCKDYW 936



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 184/662 (27%), Positives = 310/662 (46%), Gaps = 72/662 (10%)

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +Y++CG L DA   F  +R RN+ +W+ MI AYS  + ++E + LF  M+ +G+ P+   
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
              +L +CG+  +   G L+H+L ++ G      V  ++L +Y KCG L+ A+  FE M 
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 220 EKDGVAWNSMISGYFQIGEN-DEAHRLFDKMCREEIKLGVVTF----------------- 261
           EK+ V WN+M+  Y   G     A  LF +M  E +K  V+TF                 
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 262 ------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
                               L+ +Y + G    A ++   M        V TW  MIS +
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMP----CRSVGTWNSMISAY 236

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
           + + R+ +A  +F+ M   G   + VT  S + AC + + L  G  +     +  F  D+
Sbjct: 237 SISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDL 296

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
            VG +LI MY++C   E A +VF  +K  ++ +W+++I  +   G+CG+A   F  MQ+ 
Sbjct: 297 FVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQE 356

Query: 424 DVPPNVITWNVLISGY----------------IQNGNEDEA------VDLFQRMGKNDKV 461
            + PN +T+  L++G+                 ++G +D        V+++ R    D  
Sbjct: 357 GILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDA 416

Query: 462 KR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
           +         N  SWNS+I  Y Q  + ++AL +FR MQ     P+ V  +++L AC   
Sbjct: 417 RTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIG 476

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
                 K +H CV    L  S  V  SL++ YAK+G +  +  I   M  + I  WN LI
Sbjct: 477 SHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLI 536

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
            GY LHG    AL+ + +++   +  ++ TF+S++ A + +  +  GK +  +  EC   
Sbjct: 537 NGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLD 596

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
             +I   +A+ ++Y + G +E A    + MPI    S W  +L A   HG  +  +  I 
Sbjct: 597 SDVIVK-NALTNMYSKCGSMENARRIFDSMPIRSAVS-WNGMLQAYAQHGESEEVLKLIR 654

Query: 694 RL 695
           ++
Sbjct: 655 KM 656



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 130/472 (27%), Positives = 217/472 (45%), Gaps = 54/472 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTE--ID-- 90
           +G   EA+     +  +G    R T+I+LL      + +    ++H    L+TE  +D  
Sbjct: 340 HGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHL---LITEHGLDDT 396

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
             ++  L++VY +C   DDAR VF+ +   NL +W++MIG Y + +R  + ++LF  M Q
Sbjct: 397 TTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQ 456

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G+ PD   F  IL AC         KL+H  V + G+     V+ S++ +Y K G+L  
Sbjct: 457 QGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDV 516

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------- 261
           A    + MDE+   AWN +I+GY   G + EA   + K+  E I +  VTF         
Sbjct: 517 AEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTS 576

Query: 262 --------------------------NILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVF 294
                                     N L   Y++ G    +ME  +R+ +S+ I   V 
Sbjct: 577 STSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCG----SMENARRIFDSMPIRSAV- 631

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSL 353
           +W  M+  +AQ+G + + L L ++M   GV  NG+T  S +S+C+    +A G +  HSL
Sbjct: 632 SWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSL 691

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAER-VFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
               G          L+++  +  +L+ AE+ +  M  +  + +W S++ G C+      
Sbjct: 692 GHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLL-GACRVQKDLD 750

Query: 413 AYELFI-KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
             +L   K+ E D P N     VL + Y + G+   A  L + M    +VK+
Sbjct: 751 RGKLAAGKLLELD-PGNSSASVVLSNIYSERGDWKNAAKLRRAMASR-RVKK 800



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 143/301 (47%), Gaps = 11/301 (3%)

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
           Y + G+  +AV  F ++       RN  SWN +I+ Y        AL +F  M      P
Sbjct: 2   YSRCGSLGDAVAAFGKIRA-----RNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAP 56

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           N +T+++VL +C           +H   L R    +  V  +L++ Y K G ++ ++++F
Sbjct: 57  NAITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVF 116

Query: 559 DGMSSKDIITWNSLICGYVLHG-FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           + M+ K+++TWN+++  Y L G  W  A++LF +M   G+K N  TFL+++ +      +
Sbjct: 117 EEMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDAL 176

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
             GK +   + E    + +  + +A+++ Y + G L +A +  + MP     + W ++++
Sbjct: 177 RKGKFIHSCVRESEHSLDVFVN-TALVNTYTKCGSLTDARKVFDGMPCRSVGT-WNSMIS 234

Query: 678 ACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNS 737
           A  I      A    +R+   + G+   +   L I   C  PE  L+  K  RE+    S
Sbjct: 235 AYSISERSGEAFFIFQRM--QQEGERCDRVTFLSILDACVNPE-TLQHGKHVRESISETS 291

Query: 738 F 738
           F
Sbjct: 292 F 292


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/688 (34%), Positives = 382/688 (55%), Gaps = 39/688 (5%)

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           +++ Y  CG L   RR F++M++K+   WN M+S Y +IG+  E+               
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKES--------------- 46

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           +  F I++    +  + + A E+  ++       DV +W  MISG+  NG T + L ++K
Sbjct: 47  ICLFKIMVEKGIEGKRSESASELFDKL----CDRDVISWNSMISGYVSNGLTERGLGIYK 102

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
           +M ++G+  +  TI S +  C     L++G  +HSLA+K  F   +   N+L++MYSKC 
Sbjct: 103 QMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCG 162

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           +L+ A RVF+ + +++V SW SMIAGY + G+   A  L  +M++  V  +V+    ++ 
Sbjct: 163 DLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILH 222

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM------ 491
              ++G+ D   D+   +  N+ +  N    N+L+  Y + G    A  VF  M      
Sbjct: 223 ACARSGSLDNGKDVHDYIKANN-MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDII 281

Query: 492 ----QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
                     P+  T+  +LPACA L A  + KEIHG +LR    S   V N+L+D Y K
Sbjct: 282 SWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 341

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G +  +R +FD + SKD+++W  +I GY +HG+ + A+  F++M+  G++P+  +F+SI
Sbjct: 342 CGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 401

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           + A S +G+++ G + F  +   + I P +EHY+ M+DL  R+G L +A +FIE +PI P
Sbjct: 402 LYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAP 461

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR- 726
           D++IW ALL  CRI+ +I+LA    ER+F+LEP +     L+  IYA   K E+  ++R 
Sbjct: 462 DATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMRE 521

Query: 727 KLERENTRRNSFGQCWIEVKNLVYTFVTG-GWSESYSDLLYSWLQNV-----PENVTARS 780
           K+ ++  R+N  G  WIE+K  V  FV+G   S  +S  + S L+ +      E    ++
Sbjct: 522 KIGKKGLRKNP-GCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKT 580

Query: 781 SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSM 840
            ++ +  +E +KE     HSEKLA+AF L+ +     TIR+ KN+R+C  CHE AK++S 
Sbjct: 581 KYALINADEMQKEMALCGHSEKLAMAFGLL-TLPPRKTIRVTKNLRVCGDCHEMAKFMSK 639

Query: 841 MHHCEIFLADSKCLHHFKNGQCSCGDYW 868
               EI L DS   HHFK+G CSC  +W
Sbjct: 640 ETRREIVLRDSNRFHHFKDGYCSCRGFW 667



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 197/425 (46%), Gaps = 62/425 (14%)

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD---- 151
           KL+S YA CG L + R VF+ M ++N+Y W+ M+  Y++   ++E + LF +MV+     
Sbjct: 1   KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEG 60

Query: 152 -----------------------------------------------GLFPDDFLFPKIL 164
                                                          G+  D      +L
Sbjct: 61  KRSESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVL 120

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
             C   G    GK +HSL IK          N++L +Y KCG L  A R FE M E++ V
Sbjct: 121 VGCAKSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVV 180

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           +W SMI+GY + G +D A  L  +M +E +KL VV    ++ +  + G  D   ++   +
Sbjct: 181 SWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYI 240

Query: 285 ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM---------SFVG-VMPNGVTITSA 334
           ++  +  ++F    ++  +A+ G    A  +F  M         + VG + P+  T+   
Sbjct: 241 KANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPDSRTMACI 300

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           + AC  L AL  G EIH   ++ G++ D  V N+L+++Y KC  L  A  +FDMI  KD+
Sbjct: 301 LPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDL 360

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQR 454
            SW  MIAGY   GY  +A   F +M+++ + P+ +++  ++     +G  ++    F  
Sbjct: 361 VSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYI 420

Query: 455 MGKND 459
           M KND
Sbjct: 421 M-KND 424



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 108/455 (23%), Positives = 195/455 (42%), Gaps = 30/455 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG     + +   +   G  V   T I++L  C  S ++ L + +H+  +    E  +  
Sbjct: 91  NGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERRINF 150

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              LL +Y+KCG LD A  VFE M ERN+ +W++MI  Y+RD      + L   M ++G+
Sbjct: 151 SNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGV 210

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             D      IL AC   G  + GK +H  +    M+    V N+++ +Y KCG +  A  
Sbjct: 211 KLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANS 270

Query: 214 FFESMDEKDGVAWNSMIS--------------GYFQIGENDEAHRLFDKMCREEIKLGVV 259
            F +M  KD ++WN+M+                   +   +    +   + R        
Sbjct: 271 VFSTMVVKDIISWNTMVGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRH 330

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
             N L+  Y + G   +A  +   + S     D+ +WT MI+G+  +G  ++A+  F EM
Sbjct: 331 VANALVDLYVKCGVLGLARLLFDMIPS----KDLVSWTVMIAGYGMHGYGNEAIATFNEM 386

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN--SLINMYSKCE 377
              G+ P+ V+  S + AC+    L  G     + +K  F  +  + +   ++++ S+  
Sbjct: 387 RDAGIEPDEVSFISILYACSHSGLLEQGWRFFYI-MKNDFNIEPKLEHYACMVDLLSRTG 445

Query: 378 ELEAAERVFDMIK-DKDVYSWNSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWN 433
            L  A +  + +    D   W +++ G   Y       K  E   +++    P N   + 
Sbjct: 446 NLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELE----PENTGYYV 501

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           +L + Y +    +E   + +++GK    K    SW
Sbjct: 502 LLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSW 536


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 251/810 (30%), Positives = 396/810 (48%), Gaps = 93/810 (11%)

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
           W    ++   + + G   D + + K+LQ+C    D   GK +H  +++ G+     + N+
Sbjct: 9   WYAPADVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNT 68

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           +L +Y  CG +  AR+ F+    K  V+WN MISGY   G   EA  LF  M +E ++  
Sbjct: 69  LLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPD 128

Query: 258 VVTF-----------------------------------NILIRSYNQLGQCDVAMEMVK 282
             TF                                   N LI  Y + G    A  +  
Sbjct: 129 KFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFD 188

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
            M S     D  +WT +   +A++G   ++L  +  M    V P+ +T  + +SAC  L 
Sbjct: 189 AMASR----DEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLA 244

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           AL  G +IH+  V+  +  DV V  +L  MY KC   + A  VF+ +  +DV +WN+MI 
Sbjct: 245 ALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIR 304

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITW------------------------------ 432
           G+  +G   +A+  F +M E  V P+  T+                              
Sbjct: 305 GFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVS 364

Query: 433 -----NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
                N LI+ Y + G+  +A  +F RM K D V     SW +L+  Y    Q   +   
Sbjct: 365 DVRFGNALINMYSKAGSMKDARQVFDRMPKRDVV-----SWTTLLGRYADCDQVVESFTT 419

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           F++M       N +T + VL AC+  VA    KEIH  V++  L + L V N+L+  Y K
Sbjct: 420 FKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFK 479

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G++  +  +F+GMS +D++TWN+LI G   +G    AL  ++ MKS G++PN  TF+++
Sbjct: 480 CGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNV 539

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           + A  +  +V+ G++ F  +++ Y I+P  +HY+ M+D+  R+G L EA + I  +P++P
Sbjct: 540 LSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKP 599

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
            +++W ALL ACRIH N+++   A E    LEP +  +   +  IYA  G   D  K+RK
Sbjct: 600 SAAMWGALLAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRK 659

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--------TAR 779
             +E   +   G+ WIE+   V++FV    S   +  +Y+ L+ + + +        T  
Sbjct: 660 FMKERGVKKEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRF 719

Query: 780 SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYV 838
             H    +++E KE     HSEKLA+A+ LI  S  P T IRI KN+R+C  CH   K++
Sbjct: 720 VMHD---LDDEGKERAVCHHSEKLAIAYGLI--STPPGTPIRISKNLRVCTDCHTATKFI 774

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S +   EI   D+   HHFKNG+CSCGDYW
Sbjct: 775 SKITKREIIARDAHRFHHFKNGECSCGDYW 804



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 150/534 (28%), Positives = 253/534 (47%), Gaps = 72/534 (13%)

Query: 44  VLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYA 102
           VL  +  +G +V    Y+ LLQ+C+ +  + + +++H   L    + +V++   LL +YA
Sbjct: 15  VLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYA 74

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
            CG +++AR++F+    +++ +W+ MI  Y+     +E   LF LM Q+ L PD F F  
Sbjct: 75  HCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVS 134

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           IL AC +      G+ +H  V++ G++    V N+++++Y KCG +  ARR F++M  +D
Sbjct: 135 ILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRD 194

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD------- 275
            V+W ++   Y + G  +E+ + +  M +E ++   +T+  ++ +   L   +       
Sbjct: 195 EVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHA 254

Query: 276 ------------VAMEMVKRMESLGITP------------DVFTWTCMISGFAQNGRTSQ 311
                       V+  + K     G               DV  W  MI GF  +G+  +
Sbjct: 255 HIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEE 314

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           A   F  M   GV P+  T T+ +SAC     LA G EIH+ A K G   DV  GN+LIN
Sbjct: 315 AHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALIN 374

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MYSK   ++ A +VFD +  +DV SW +++  Y       +++  F +M +  V  N IT
Sbjct: 375 MYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKIT 434

Query: 432 W-----------------------------------NVLISGYIQNGNEDEAVDLFQRMG 456
           +                                   N L+S Y + G+ ++A+ +F+ M 
Sbjct: 435 YMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMS 494

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             D V     +WN+LI G  Q G+   AL  +  M+S    PN  T ++VL AC
Sbjct: 495 MRDVV-----TWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSAC 543



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 211/437 (48%), Gaps = 41/437 (9%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           G   EA  +   +  +  +  + T++++L AC     ++  R++H   +      D  V 
Sbjct: 108 GLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVG 167

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+S+YAKCG + DAR VF+ M  R+  +W+ + GAY+      E ++ +  M+Q+ + 
Sbjct: 168 NALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVR 227

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P    +  +L ACG+    E GK +H+ +++       RV  ++  +Y+KCG    AR  
Sbjct: 228 PSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREV 287

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------- 261
           FE +  +D +AWN+MI G+   G+ +EAH  F +M  E +     T+             
Sbjct: 288 FECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGL 347

Query: 262 ----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                                 N LI  Y++ G    A ++  RM       DV +WT +
Sbjct: 348 ARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKR----DVVSWTTL 403

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           +  +A   +  ++   FK+M   GV  N +T    + AC++  AL  G EIH+  VK G 
Sbjct: 404 LGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGL 463

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             D+ V N+L++MY KC  +E A RVF+ +  +DV +WN++I G  Q G   +A + +  
Sbjct: 464 LADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEV 523

Query: 420 MQESDVPPNVITW-NVL 435
           M+   + PN  T+ NVL
Sbjct: 524 MKSEGMRPNAATFVNVL 540



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 115/475 (24%), Positives = 202/475 (42%), Gaps = 49/475 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           +G   E++    ++  +  +  R TY+N+L AC    ++   +++HA  +      DV V
Sbjct: 208 SGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRV 267

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L  +Y KCG   DAREVFE +  R++  W+ MI  +    +  E    F  M+++G+
Sbjct: 268 STALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGV 327

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD   +  +L AC   G    GK +H+   K G+    R  N+++ +Y K G +  AR+
Sbjct: 328 APDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQ 387

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------ 261
            F+ M ++D V+W +++  Y    +  E+   F +M ++ +K   +T+            
Sbjct: 388 VFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVA 447

Query: 262 -----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
                                  N L+  Y + G  + A+ + + M       DV TW  
Sbjct: 448 LKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMS----MRDVVTWNT 503

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK-M 357
           +I G  QNGR  +AL  ++ M   G+ PN  T  + +SAC     +  G    +   K  
Sbjct: 504 LIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDY 563

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS-WNSMIAG---YCQAGYCGKA 413
           G          ++++ ++   L  AE V   I  K   + W +++A    +C      +A
Sbjct: 564 GIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGERA 623

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
            E  +K++    P N   +  L + Y   G   +   L + M +    K    SW
Sbjct: 624 AEHCLKLE----PQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSW 674


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 251/789 (31%), Positives = 411/789 (52%), Gaps = 73/789 (9%)

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           + + D+    + +S Y + G  + A  VF  MR R+  T++AMI  Y  + ++    ++F
Sbjct: 55  IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVF 114

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M      PD  L                                    N +L+ YVK 
Sbjct: 115 EKM------PDRDLIS---------------------------------WNVMLSGYVKN 135

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CREEIKLGVVTFNIL 264
           G L  AR  F  M EKD V+WN+M+SG+ Q G  +EA ++FD+M  + EI     ++N L
Sbjct: 136 GNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEI-----SWNGL 190

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
           + +Y Q G+    +E  +R+    +  ++ +W C++ G+ +  R   A  LF  M     
Sbjct: 191 LSAYVQNGR----IEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDK 246

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
           +   + IT    A   L + A  +    L ++     DV    ++++ + +   L+ A R
Sbjct: 247 ISWNIMITGY--AQNGLLSEARRL-FEELPIR-----DVFAWTAMVSGFVQNGMLDEATR 298

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           +F+ + +K+  SWN+MIAGY Q+    KA ELF +M       N  +WN +++GY Q GN
Sbjct: 299 IFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSR----NTSSWNTMVTGYAQCGN 354

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            D+A  LF  M + D +     SW ++I+GY Q GQ   AL +F KM+      N   + 
Sbjct: 355 IDQAKILFDEMPQRDCI-----SWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALA 409

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
             L +CA + A    K++HG +++   ++     N+L+  Y K G+I  +  +F+ ++ K
Sbjct: 410 CALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEK 469

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           DI++WN++I GY  HGF   AL LF+ MK   +KP+  T + ++ A S  G+VD G + F
Sbjct: 470 DIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTGLVDKGMEYF 528

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
            S+ + Y I    +HY+ MIDL GR+G+L+EA+  ++ MP  PD++ W ALL A RIHG+
Sbjct: 529 NSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGD 588

Query: 685 IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIE 744
            +L   A E++F++EP +  +  L+  +YA  G+  +  ++R   R+   +   G  W+E
Sbjct: 589 TELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVE 648

Query: 745 VKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS--SHSGLC---IEEEEKEEISGIH 799
           ++N  + F  G  S   ++ +Y++L+ +   +      S + L    +EEEEKE +   H
Sbjct: 649 IQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYH 708

Query: 800 SEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKN 859
           SEKLA+AF ++ S      IR++KN+R+C  CH   K++S +   +I + DS   HHF  
Sbjct: 709 SEKLAVAFGIL-SIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSE 767

Query: 860 GQCSCGDYW 868
           G CSCGDYW
Sbjct: 768 GSCSCGDYW 776



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 240/505 (47%), Gaps = 69/505 (13%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           TY  ++   + +N    ARK+      + + D+     +LS Y K G L  AR +F  M 
Sbjct: 93  TYNAMISGYLSNNKFDCARKV---FEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP 149

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK- 177
           E+++ +W+AM+  ++++    E  ++F  M    L  ++  +  +L A    G  E  + 
Sbjct: 150 EKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARR 205

Query: 178 ---------------LMHSLVIKLGMSCVRR------VRNSV-----LAVYVKCGKLIWA 211
                          LM   V K  +   R       VR+ +     +  Y + G L  A
Sbjct: 206 LFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEA 265

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           RR FE +  +D  AW +M+SG+ Q G  DEA R+F++M  +      V++N +I  Y Q 
Sbjct: 266 RRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAMIAGYVQS 321

Query: 272 GQCDVAMEMVKRMESLGITP---------------------------DVFTWTCMISGFA 304
            Q + A E+  +M S   +                            D  +W  MISG+A
Sbjct: 322 QQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYA 381

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           Q+G++ +AL LF +M   G + N   +  A+S+C ++ AL +G ++H   VK GF    +
Sbjct: 382 QSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYI 441

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
            GN+L+ MY KC  +E A  VF+ I +KD+ SWN+MIAGY + G+  +A  LF  M+ + 
Sbjct: 442 AGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT- 500

Query: 425 VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
           + P+ +T   ++S     G  D+ ++ F  M +N  +  N   +  +I    + G+ + A
Sbjct: 501 IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEA 560

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPA 509
           L +   M+S  FYP+  T  ++L A
Sbjct: 561 LNL---MKSMPFYPDAATWGALLGA 582



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 176/369 (47%), Gaps = 18/369 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           NG L+EA  + + +  +  +V  N    ++   + S  I  AR+L    + +   +    
Sbjct: 290 NGMLDEATRIFEEMPEKN-EVSWNA---MIAGYVQSQQIEKAREL---FDQMPSRNTSSW 342

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             +++ YA+CG +D A+ +F++M +R+  +W+AMI  Y++  +  E + LF  M +DG  
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            +       L +C      E GK +H  ++K G        N++LA+Y KCG +  A   
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDV 462

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           FE + EKD V+WN+MI+GY + G   EA  LF+ M +  IK   VT   ++ + +  G  
Sbjct: 463 FEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLV 521

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
           D  ME    M ++ GIT +   +TCMI    + GR  +AL+L K M F    P+  T  +
Sbjct: 522 DKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFY---PDAATWGA 578

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            + A        +G +      +M   D+  +   L N+Y+          +   ++DK 
Sbjct: 579 LLGASRIHGDTELGEKAAEKVFEME-PDNSGMYVLLSNLYAASGRWREVREMRSKMRDKG 637

Query: 394 V-----YSW 397
           V     YSW
Sbjct: 638 VKKVPGYSW 646


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 250/795 (31%), Positives = 402/795 (50%), Gaps = 88/795 (11%)

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           +++V  + + ++ + + G + DA  +F  M  R+  T++ M+  Y+ + R  + +  F  
Sbjct: 104 DMEVIRRNRAITAHMRAGRVPDAERLFAAMPRRSTSTYNTMLAGYAANGRLPQALSFFRS 163

Query: 148 MVQDGLFPDDFLFPKILQACG---NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           + +    PD F +  +L A G   +  D  A  L   + +K  +S      N +++ +  
Sbjct: 164 IPR----PDSFSYNTLLHALGVSSSLADVRA--LFDEMPVKDSVSY-----NVMISSHAN 212

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
            G +  AR +F+   EKD V+WN M++ Y + G   EA  LFD       +   +++N L
Sbjct: 213 HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDS----RTEWDAISWNAL 268

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
           +  Y Q  Q + A +M  +M       DV +W  M+SG+A+ G  ++A  LF       V
Sbjct: 269 MAGYVQRSQIEEAQKMFNKMPQR----DVVSWNTMVSGYARRGDMAEARRLFD------V 318

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            P                                   DV    ++++ Y++   LE A+R
Sbjct: 319 AP---------------------------------IRDVFTWTAIVSGYAQNGMLEEAKR 345

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP--NVITWNVLISGYIQN 442
           VFD + DK+  SWN+M+A Y Q     +A ELF      D  P  NV +WN +++GY Q 
Sbjct: 346 VFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELF------DAMPCRNVASWNTMLTGYAQA 399

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G  DEA  +F  M + D V     SW +++A Y Q+G     L +F++M     + N   
Sbjct: 400 GMLDEARAIFGMMPQKDAV-----SWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSA 454

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
              VL  CA + A     ++H  +++        V N+L+  Y K G++  + + F+ M 
Sbjct: 455 FACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEME 514

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            +D+++WN++I GY  HGF   AL++FD M+    KP+  T + ++ A S +G+V+ G  
Sbjct: 515 ERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGIS 574

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F S+   + +    EHY+ MIDL GR+G+L+EA+  ++DMP EPDS++W ALL A RIH
Sbjct: 575 YFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIH 634

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
            N +L   A E++F+LEP +  +  L+  IYA  GK  D  K+R +  E   +   G  W
Sbjct: 635 RNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSW 694

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKE 793
           IEV+N V+TF  G       + +Y++L    E++  R   +G           +EEEEKE
Sbjct: 695 IEVQNKVHTFSVGDSVHPEREDIYAFL----EDLDIRMKKAGYVSATDMVLHDVEEEEKE 750

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
            +   HSEKLA+A+ ++        IR++KN+R+C  CH   K +S +    I L DS  
Sbjct: 751 HMLKYHSEKLAVAYGILKIPPG-RPIRVIKNLRVCRDCHTAFKCISAIEGRLIILRDSNR 809

Query: 854 LHHFKNGQCSCGDYW 868
            HHF++G CSCGDYW
Sbjct: 810 FHHFRDGSCSCGDYW 824



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 142/532 (26%), Positives = 252/532 (47%), Gaps = 60/532 (11%)

Query: 10  QQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACID 69
           ++L + + ++S   + +T L     NGRL +A++   SI    +     +Y  LL A   
Sbjct: 127 ERLFAAMPRRSTSTY-NTMLAGYAANGRLPQALSFFRSIPRPDS----FSYNTLLHALGV 181

Query: 70  SNSIHLARKL------------------HA----------FLNLVTEIDVFVKTKLLSVY 101
           S+S+   R L                  HA          + +L  E D      +L+ Y
Sbjct: 182 SSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAY 241

Query: 102 AKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFP 161
            + G + +ARE+F+   E +  +W+A++  Y +  +  E  ++F  M Q     D   + 
Sbjct: 242 VRNGRIQEARELFDSRTEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQR----DVVSWN 297

Query: 162 KILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE 220
            ++      GD  EA +L     I+   +       ++++ Y + G L  A+R F++M +
Sbjct: 298 TMVSGYARRGDMAEARRLFDVAPIRDVFTWT-----AIVSGYAQNGMLEEAKRVFDAMPD 352

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKM-CREEIKLGVVTFNILIRSYNQLGQCDVAME 279
           K+ V+WN+M++ Y Q    +EA  LFD M CR      V ++N ++  Y Q G  D A  
Sbjct: 353 KNAVSWNAMMAAYVQRRMMEEAKELFDAMPCR-----NVASWNTMLTGYAQAGMLDEARA 407

Query: 280 MVKRMESLGITP--DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
           +       G+ P  D  +W  M++ ++Q G + + L LFKEM   G   N       +S 
Sbjct: 408 I------FGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLST 461

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C D+ AL  GM++HS  +K G+     VGN+L+ MY KC  +E A   F+ ++++DV SW
Sbjct: 462 CADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSW 521

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
           N+MIAGY + G+  +A E+F  M+++   P+ IT   +++    +G  ++ +  F  M +
Sbjct: 522 NTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHR 581

Query: 458 NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           +  V      +  +I    + G+ + A+ + + M    F P+     ++L A
Sbjct: 582 DFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMP---FEPDSTMWGALLGA 630


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 235/677 (34%), Positives = 376/677 (55%), Gaps = 41/677 (6%)

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
            ++I    +I    +A +L  +  R +  L   + +I+I  Y  L     A+ + K +ES
Sbjct: 9   KTLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLVFKTLES 67

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
               P V  W  +I  F      S+AL  F EM   G  P+     S + +CT +  L  
Sbjct: 68  ----PPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRF 123

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G  +H   V++G   D+  GN+L+NMYSK   +++  +VF+++  KDV S+N++IAGY Q
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQ 183

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVL---------------ISGY-IQNGNEDEA-- 448
           +G    A  +  +M  SD+ P+  T + +               I GY I+ G + +   
Sbjct: 184 SGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYI 243

Query: 449 ----VDLFQ---RMGKNDKV-----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
               VD++    R+  +++V     +R++ SWNSL+AGY Q G+ N AL +FR+M S+  
Sbjct: 244 GSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKV 303

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            P  V   SV+PACA+L   +  K++HG VLR     ++ + ++L+D Y+K GNI  +R 
Sbjct: 304 RPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARK 363

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           IFD M+  D ++W ++I G+ LHG  H A+ LF++MK  G+KPN+  F++++ A S  G+
Sbjct: 364 IFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 423

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           VD     F S+T+ Y +   +EHY+A+ DL GR+GKLEEA +FI  M +EP  S+W  LL
Sbjct: 424 VDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLL 483

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
           ++C +H N++LA    E++F ++  ++    L+  +YA  G+ ++  K+R   R+   R 
Sbjct: 484 SSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMAKLRLRVRKKGLRK 543

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTAR---SSHSGLC--IEEEE 791
                WIE+KN  + FV+G  S    D +  +L+ V E +      +  SG+   ++EE 
Sbjct: 544 KPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVADTSGVLHDVDEEH 603

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           K E+   HSE+LA+AF +I +++   TIR+ KNIR+C  CH   K++S +   EI + D+
Sbjct: 604 KRELLFGHSERLAVAFGII-NTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDN 662

Query: 852 KCLHHFKNGQCSCGDYW 868
              HHF  G CSCGDYW
Sbjct: 663 SRFHHFNRGSCSCGDYW 679



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 199/413 (48%), Gaps = 31/413 (7%)

Query: 76  ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           A++LHA       +     + ++S+Y     L +A  VF+ +    +  W ++I  ++  
Sbjct: 24  AKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQ 83

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
             +   +  F  M   G  PD  +FP +L++C    D   G+ +H  +++LGM C     
Sbjct: 84  SLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 143

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N+++ +Y K   +   R+ FE M  KD V++N++I+GY Q G  ++A R+  +M   ++K
Sbjct: 144 NALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLK 203

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF--------------------- 294
               T + ++  +++        E+   +   GI  DV+                     
Sbjct: 204 PDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 263

Query: 295 ----------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
                     +W  +++G+ QNGR ++AL LF++M    V P  V  +S I AC  L  L
Sbjct: 264 FSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATL 323

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
            +G ++H   ++ GF  ++ + ++L++MYSKC  ++AA ++FD +   D  SW ++I G+
Sbjct: 324 HLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGH 383

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
              G+  +A  LF +M+   V PN + +  +++     G  DEA   F  M K
Sbjct: 384 ALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK 436



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 183/417 (43%), Gaps = 75/417 (17%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           N + ++L++C     +     +H F+  L  + D++    L+++Y+K   +D  R+VFE 
Sbjct: 106 NVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFEL 165

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M  +++ +++ +I  Y++   + + + +   M    L PD F    +L       D   G
Sbjct: 166 MPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKG 225

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           K +H  VI+ G+     + +S++ +Y K  ++  + R F  +  +D ++WNS+++GY Q 
Sbjct: 226 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQN 285

Query: 237 GENDEAHRLFDKMCREEIKLGVVTF------------------------------NILIR 266
           G  +EA RLF +M   +++ G V F                              NI I 
Sbjct: 286 GRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIA 345

Query: 267 S-----YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           S     Y++ G    A ++  RM       D  +WT +I G A +G   +A+ LF+EM  
Sbjct: 346 SALVDMYSKCGNIQAARKIFDRMN----LHDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 401

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL-VGNSLINMYSKCEELE 380
            GV PN V   + ++AC+ +                G  D+     NS+  +Y   +ELE
Sbjct: 402 QGVKPNQVAFVAVLTACSHV----------------GLVDEAWGYFNSMTKVYGLNQELE 445

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
               V D++                +AG   +AY+   KM+   V P    W+ L+S
Sbjct: 446 HYAAVADLLG---------------RAGKLEEAYDFISKMR---VEPTGSVWSTLLS 484



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/318 (22%), Positives = 156/318 (49%), Gaps = 5/318 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           +G   +A+ ++  + T   K    T  ++L    +   +   +++H + +    + DV++
Sbjct: 184 SGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYI 243

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAK   ++D+  VF  +  R+  +W++++  Y ++ R+ E + LF  MV   +
Sbjct: 244 GSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKV 303

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P    F  ++ AC +      GK +H  V++ G      + ++++ +Y KCG +  AR+
Sbjct: 304 RPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARK 363

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M+  D V+W ++I G+   G   EA  LF++M R+ +K   V F  ++ + + +G 
Sbjct: 364 IFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 423

Query: 274 CDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            D A      M  + G+  ++  +  +     + G+  +A D   +M    V P G   +
Sbjct: 424 VDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKMR---VEPTGSVWS 480

Query: 333 SAISACTDLKALAMGMEI 350
           + +S+C+  K L +  ++
Sbjct: 481 TLLSSCSVHKNLELAEKV 498


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 251/789 (31%), Positives = 410/789 (51%), Gaps = 73/789 (9%)

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           + + D+    + +S Y + G  + A  VF  MR R+  T++AMI  Y  + ++    ++F
Sbjct: 55  IVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVF 114

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M      PD  L                                    N +L+ YVK 
Sbjct: 115 EKM------PDRDLIS---------------------------------WNVMLSGYVKN 135

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CREEIKLGVVTFNIL 264
           G L  AR  F  M EKD V+WN+M+SG+ Q G  +EA ++FD+M  + EI     ++N L
Sbjct: 136 GNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEI-----SWNGL 190

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
           + +Y Q G+    +E  +R+    +  ++ +W C++ G+ +  R   A  LF  M     
Sbjct: 191 LSAYVQNGR----IEDARRLFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDK 246

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
           +   + IT    A   L + A  +    L ++     DV    ++++ + +   L+ A R
Sbjct: 247 ISWNIMITGY--AQNGLLSEARRL-FEELPIR-----DVFAWTAMVSGFVQNGMLDEATR 298

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           +F+ + +K+  SWN+MIAGY Q+    KA ELF +M       N  +WN +++GY Q GN
Sbjct: 299 IFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQMPSR----NTSSWNTMVTGYAQCGN 354

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            D+A  LF  M + D +     SW ++I+GY Q GQ   AL +F KM+      N   + 
Sbjct: 355 IDQAKILFDEMPQRDCI-----SWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALA 409

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
             L +CA + A    K++HG +++   ++     N+L+  Y K G+I  +  +F+ ++ K
Sbjct: 410 CALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEK 469

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           DI++WN++I GY  HGF   AL LF+ MK   +KP+  T + ++ A S  G VD G + F
Sbjct: 470 DIVSWNTMIAGYARHGFGKEALALFESMK-MTIKPDDVTLVGVLSACSHTGFVDKGMEYF 528

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
            S+ + Y I    +HY+ MIDL GR+G+L+EA+  ++ MP  PD++ W ALL A RIHG+
Sbjct: 529 NSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGD 588

Query: 685 IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIE 744
            +L   A E++F++EP +  +  L+  +YA  G+  +  ++R   R+   +   G  W+E
Sbjct: 589 TELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWVE 648

Query: 745 VKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS--SHSGLC---IEEEEKEEISGIH 799
           ++N  + F  G  S   ++ +Y++L+ +   +      S + L    +EEEEKE +   H
Sbjct: 649 IQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSSTKLVLHDVEEEEKEHMLKYH 708

Query: 800 SEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKN 859
           SEKLA+AF ++ S      IR++KN+R+C  CH   K++S +   +I + DS   HHF  
Sbjct: 709 SEKLAVAFGIL-SIPPGRPIRVIKNLRVCEDCHNAIKHISKITQRQIIVRDSNRFHHFSE 767

Query: 860 GQCSCGDYW 868
           G CSCGDYW
Sbjct: 768 GSCSCGDYW 776



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 240/505 (47%), Gaps = 69/505 (13%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           TY  ++   + +N    ARK+      + + D+     +LS Y K G L  AR +F  M 
Sbjct: 93  TYNAMISGYLSNNKFDCARKV---FEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMP 149

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK- 177
           E+++ +W+AM+  ++++    E  ++F  M    L  ++  +  +L A    G  E  + 
Sbjct: 150 EKDVVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARR 205

Query: 178 ---------------LMHSLVIKLGMSCVRR------VRNSV-----LAVYVKCGKLIWA 211
                          LM   V K  +   R       VR+ +     +  Y + G L  A
Sbjct: 206 LFDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEA 265

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           RR FE +  +D  AW +M+SG+ Q G  DEA R+F++M  +      V++N +I  Y Q 
Sbjct: 266 RRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAMIAGYVQS 321

Query: 272 GQCDVAMEMVKRMESLGITP---------------------------DVFTWTCMISGFA 304
            Q + A E+  +M S   +                            D  +W  MISG+A
Sbjct: 322 QQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYA 381

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           Q+G++ +AL LF +M   G + N   +  A+S+C ++ AL +G ++H   VK GF    +
Sbjct: 382 QSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYI 441

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
            GN+L+ MY KC  +E A  VF+ I +KD+ SWN+MIAGY + G+  +A  LF  M+ + 
Sbjct: 442 AGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT- 500

Query: 425 VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
           + P+ +T   ++S     G  D+ ++ F  M +N  +  N   +  +I    + G+ + A
Sbjct: 501 IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEA 560

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPA 509
           L +   M+S  FYP+  T  ++L A
Sbjct: 561 LNL---MKSMPFYPDAATWGALLGA 582



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 176/369 (47%), Gaps = 18/369 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           NG L+EA  + + +  +  +V  N    ++   + S  I  AR+L    + +   +    
Sbjct: 290 NGMLDEATRIFEEMPEKN-EVSWNA---MIAGYVQSQQIEKAREL---FDQMPSRNTSSW 342

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             +++ YA+CG +D A+ +F++M +R+  +W+AMI  Y++  +  E + LF  M +DG  
Sbjct: 343 NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGI 402

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            +       L +C      E GK +H  ++K G        N++LA+Y KCG +  A   
Sbjct: 403 LNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDV 462

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           FE + EKD V+WN+MI+GY + G   EA  LF+ M +  IK   VT   ++ + +  G  
Sbjct: 463 FEDITEKDIVSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFV 521

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
           D  ME    M ++ GIT +   +TCMI    + GR  +AL+L K M F    P+  T  +
Sbjct: 522 DKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFY---PDAATWGA 578

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            + A        +G +      +M   D+  +   L N+Y+          +   ++DK 
Sbjct: 579 LLGASRIHGDTELGEKAAEKVFEME-PDNSGMYVLLSNLYAASGRWREVREMRSKMRDKG 637

Query: 394 V-----YSW 397
           V     YSW
Sbjct: 638 VKKVPGYSW 646


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  404 bits (1038), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 277/889 (31%), Positives = 426/889 (47%), Gaps = 154/889 (17%)

Query: 42  ITVLDSIATQGAKVRRNTYINLLQACIDSNSIH--LARKLHA------------FLNLVT 87
           +T  DSI T       N Y +LLQ C   + I   LAR +HA             LN + 
Sbjct: 1   MTTPDSIRTAA-----NRYGSLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLI 55

Query: 88  EI--------------------DVFVKTKLLSVYAKCGCLDDAREVFED--MRERNLYTW 125
           +I                    D+  +T L++ Y+  G L  +R++F D  +  R+   +
Sbjct: 56  DIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFY 115

Query: 126 SAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVI 184
           +AMI AYS +      +ELF  M +D   PD++ F  +L A     + E   + +H  V+
Sbjct: 116 NAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVV 175

Query: 185 KLGMSCVRRVRNSVLAVYVKCGK---------LIWARRFFESMDEKDGVAWNSMISGYFQ 235
           K G   V  V N++++ YVKC           +  AR+ F+ M  +D ++W ++I+GY +
Sbjct: 176 KSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVK 235

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
             + D A    +   +   KLGV                                     
Sbjct: 236 NNDLDAAKEFLNGTSK---KLGV------------------------------------A 256

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  MISG+A  G   +A ++F++M    +  +  T TS IS C +     +G E+H+  +
Sbjct: 257 WNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFL 316

Query: 356 KM--GFTDDVL--VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           K       DV   V N+LI  Y KC +++ A+                            
Sbjct: 317 KTVANPAPDVAMPVNNALITFYWKCGKVDIAQ---------------------------- 348

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
              E+F KM E D+    ++WN+++SGY+     DEA   F     N+  ++N  SW  +
Sbjct: 349 ---EIFNKMPERDL----VSWNIILSGYVNVRCMDEAKSFF-----NEMPEKNILSWIIM 396

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           I+G  Q+G    AL  F +M+   F P        + +C+ L +    +++H  V+R   
Sbjct: 397 ISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGY 456

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
           ESSL   N+LI  YA+ G +  +  +F  M   D I+WN++I     HG    A++LF++
Sbjct: 457 ESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEE 516

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           M   G+ P+R +FL++I A S AG+V  G+K F S+   Y + P  EHY+ +IDL  R+G
Sbjct: 517 MLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAG 576

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
           K  EA E +E MP EP + IWEALL  CRIHGNIDL + A ERLF+L+P       L+  
Sbjct: 577 KFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYVLLSN 636

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN 771
           +YA+ G+  D  KVRKL R+   +   G  WIEV+N V++F+ G  +      +Y++L+ 
Sbjct: 637 MYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYNYLEQ 696

Query: 772 ----------VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH--TI 819
                     VP+            +E + KE     HSEKLA+A+  +   + PH  T+
Sbjct: 697 LVLEMRKIGYVPDTKCVLHD-----VESDLKEHELSTHSEKLAVAYGFM---KLPHGATV 748

Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           R+ KN+R+C  CH   K++S +   EI + D K  HHF++G+CSCGDYW
Sbjct: 749 RVFKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 262/857 (30%), Positives = 416/857 (48%), Gaps = 96/857 (11%)

Query: 93   VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
            V   L+++Y++CGC++DA +VF+ M  R+  +W++ I  Y  +      V+LF  M  +G
Sbjct: 235  VANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEG 294

Query: 153  LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM--------SCVRRVRNSVLA-VYV 203
                      +L AC   G    GK++H   +K G+        S +     S L  +YV
Sbjct: 295  TEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYV 354

Query: 204  KCGKLIWARRFFESMDEKDGV-AWNSMISGYFQIGENDEAHRLFDKM------------- 249
            KCG +  ARR F++M  K  V  WN ++ GY +  E +E+  LF++M             
Sbjct: 355  KCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALS 414

Query: 250  ----------CREE--------IKLGVVT----FNILIRSYNQLGQCDVAMEMVKRMESL 287
                      C  +        +KLG  T     N LI  Y +    D A+ +  RM   
Sbjct: 415  CLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPH- 473

Query: 288  GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
                D  +W  +ISG   NG  S+A++LF  M   G   +  T+ S + AC       +G
Sbjct: 474  ---QDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVG 530

Query: 348  MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
              +H  +VK G   +  + N+L++MYS C +  +  ++F  +  K+V SW +MI  Y +A
Sbjct: 531  RVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRA 590

Query: 408  GYCGKAYELFIKMQESDVPPNVITWNVLISGY----------------IQNG-------- 443
            G   K   L  +M    + P+V     ++ G+                I+NG        
Sbjct: 591  GLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVA 650

Query: 444  -----------NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
                       N +EA  +F  +   D +     SWN+LI GY +    N +  +F  M 
Sbjct: 651  NALMEMYVNCRNMEEARLVFDHVTNKDII-----SWNTLIGGYSRNNFANESFSLFSDML 705

Query: 493  SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
               F PN VT+  +LPA A + +  + +EIH   LRR         N+L+D Y K G ++
Sbjct: 706  LQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALL 764

Query: 553  YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
             +R +FD ++ K++I+W  +I GY +HG    A+ LF+QM+  G++P+  +F +I+ A  
Sbjct: 765  VARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACC 824

Query: 613  LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
             +G+   G K F ++ + Y+I P ++HY+ ++DL   +G L+EA EFIE MPIEPDSSIW
Sbjct: 825  HSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIW 884

Query: 673  EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
             +LL  CRIH ++ LA    +R+F LEP +     L+  IYA   + E   K++      
Sbjct: 885  VSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGR 944

Query: 733  TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP-----ENVTARSSHSGLCI 787
              R + G  WIEV+  V+ F+    +    + +  +L +V      E    +  +S +  
Sbjct: 945  GLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVARRMREEGHDPKKKYSLMGA 1004

Query: 788  EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIF 847
             +   +E    HS KLA+ F ++   +    IR+ KN ++C HCHE AK++S M + EI 
Sbjct: 1005 NDAVHDEALCGHSSKLAVTFGVLHLPEG-RPIRVTKNSKVCSHCHEAAKFISKMCNREII 1063

Query: 848  LADSKCLHHFKNGQCSC 864
            L DS   HHF+ G+CSC
Sbjct: 1064 LRDSSRFHHFEGGRCSC 1080



 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 201/759 (26%), Positives = 342/759 (45%), Gaps = 119/759 (15%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTE--I 89
           LC  G L  A+ +L S    G +    +Y  ++Q C +  S+  AR+ HA +   T   I
Sbjct: 73  LCQAGDLAAALRLLGSDGGVGVR----SYCAVVQLCGEERSLEAARRAHALVRAGTGGII 128

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRER--NLYTWSAMIGAYSRDQRWREVVELFFL 147
              +  +L+  Y KCG L  AR VF++M  R  ++  W++++ AY++   ++E V LF  
Sbjct: 129 GSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQ 188

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M   G+ PD      +L+   + G    G+++H L+ KLG+     V N+++A+Y +CG 
Sbjct: 189 MQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGC 248

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------ 261
           +  A + F+SM  +D ++WNS ISGYF  G +D A  LF KM  E  ++  VT       
Sbjct: 249 MEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPA 308

Query: 262 --------------------------------------NILIRSYNQLGQCDVAMEMVKR 283
                                                 + L+  Y + G    A  +   
Sbjct: 309 CAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDA 368

Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
           M S G   +V  W  ++ G+A+     ++L LF++M  +G+ P+   ++  +   T L  
Sbjct: 369 MPSKG---NVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSC 425

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
              G+  H   VK+GF     V N+LI+ Y+K   ++ A  VFD +  +D  SWNS+I+G
Sbjct: 426 ARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISG 485

Query: 404 YCQAGYCGKAYELFIK--MQESDVPPNVIT-----------WNV--LISGY-IQNG--NE 445
               G   +A ELF++  MQ  ++    +            W V  ++ GY ++ G   E
Sbjct: 486 CTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGE 545

Query: 446 DEAVDLFQRMGKN------------DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
               +    M  N            +  ++N  SW ++I  Y + G  +   G+ ++M  
Sbjct: 546 TSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVL 605

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
               P+   + SVL   A   +  + K +HG  +R  +E  LPV N+L++ Y    N+  
Sbjct: 606 DGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEE 665

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           +R +FD +++KDII+WN+LI GY  + F + +  LF  M     KPN  T   I+ A + 
Sbjct: 666 ARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDML-LQFKPNTVTMTCILPAVAS 724

Query: 614 AGMVDLGKKVFCS------ITECYQIIPMIEHY------------------------SAM 643
              ++ G+++         + + Y    +++ Y                        + M
Sbjct: 725 ISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIM 784

Query: 644 IDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLTAC 679
           I  YG  G  ++A+   E M    +EPD++ + A+L AC
Sbjct: 785 IAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYAC 823



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 199/481 (41%), Gaps = 89/481 (18%)

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL--AVKM 357
           I    Q G  + AL L      VGV     +  + +  C + ++L      H+L  A   
Sbjct: 70  IQRLCQAGDLAAALRLLGSDGGVGVR----SYCAVVQLCGEERSLEAARRAHALVRAGTG 125

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK--DVYSWNSMIAGYCQAGYCGKAYE 415
           G    VL G  L+  Y KC +L  A  VFD +  +  DV  W S+++ Y +AG   +   
Sbjct: 126 GIIGSVL-GKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVS 184

Query: 416 LFIKMQESDVPPNV-----------------------------------ITWNVLISGYI 440
           LF +MQ   V P+                                       N LI+ Y 
Sbjct: 185 LFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANALIALYS 244

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           + G  ++A+ +F  M   D +     SWNS I+GY   G  + A+ +F KM S     + 
Sbjct: 245 RCGCMEDAMQVFDSMHARDAI-----SWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISS 299

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID---------TYAKSGNI 551
           VT+LSVLPACA L      K +HG  ++  L   L  + S ID          Y K G++
Sbjct: 300 VTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDM 359

Query: 552 VYSRTIFDGMSSK-DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI--- 607
             +R +FD M SK ++  WN ++ GY     +  +L LF+QM   G+ P+      +   
Sbjct: 360 GSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKC 419

Query: 608 ----------ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
                     ++AH    +V LG    C++             +A+I  Y +S  ++ A+
Sbjct: 420 ITCLSCARDGLVAHGY--LVKLGFGTQCAVC------------NALISFYAKSNMIDNAV 465

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICG 717
              + MP + D+  W ++++ C  +G    A+    R++    G  L    +L +   C 
Sbjct: 466 LVFDRMPHQ-DTISWNSVISGCTSNGLNSEAIELFVRMW--MQGHELDSTTLLSVLPACA 522

Query: 718 K 718
           +
Sbjct: 523 R 523



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 4/201 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N   NE+ ++   +  Q  K    T   +L A    +S+   R++HA+ L      D + 
Sbjct: 691 NNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYT 749

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y KCG L  AR +F+ + ++NL +W+ MI  Y      ++ V LF  M   G+
Sbjct: 750 SNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGV 809

Query: 154 FPDDFLFPKILQACGNCG-DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  IL AC + G   E  K  +++  +  +    +    ++ +    G L  A 
Sbjct: 810 EPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAF 869

Query: 213 RFFESMD-EKDGVAWNSMISG 232
            F ESM  E D   W S++ G
Sbjct: 870 EFIESMPIEPDSSIWVSLLHG 890


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 258/817 (31%), Positives = 423/817 (51%), Gaps = 89/817 (10%)

Query: 131 AYSRDQRWREVVELFFLMVQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMS 189
           A  R++ + + +++F  ++ D  F  D+F FP +++AC    D   G+++H +VIK+G+ 
Sbjct: 4   AVHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLL 63

Query: 190 CVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG-ENDEAHRLFDK 248
               V N+++A+Y K G +  A + F  M  ++ V+WNS+ISG+ + G   D    L + 
Sbjct: 64  LDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEM 123

Query: 249 MCREE--------------------------------IKLG----VVTFNILIRSYNQLG 272
           M  EE                                +KLG    V   N L+  Y++ G
Sbjct: 124 MAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCG 183

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV-GVMPNGVTI 331
               A  +  +        +  +W  MI G    G   +A +LF+EM     +  N VT+
Sbjct: 184 YLTEAQMLFDKNNR----KNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTV 239

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
            + + AC ++  L    E+H  +++ GF  D LV N  +  Y+KC  L  AERVF  ++ 
Sbjct: 240 LNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMET 299

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN------------------ 433
           K V SWN++I G  Q G   KA  L+I+M  S + P+  T                    
Sbjct: 300 KTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEV 359

Query: 434 -----------------VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
                             L+S YI  G    A  LF  M      ++++ SWN++I+GY 
Sbjct: 360 HGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGM-----EEKSSVSWNAMISGYS 414

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           Q G   +AL +FRK+ S  F P+ + ++SVL AC+   A    KE H   L+  L   + 
Sbjct: 415 QNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVF 474

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           V  S ID YAKSG I  SR++FDG+ +KD+ +WN++I  Y +HG    +++LF++M+  G
Sbjct: 475 VACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVG 534

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
             P+  TF+ I+   S AG+V+ G K F  +   + I P +EHY+ ++D+ GR+G+L++A
Sbjct: 535 QMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDA 594

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
           +  + +MP +PDS +W +LL+ CR  G +++  +  E+L +LEP +V     +  +YA  
Sbjct: 595 LRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGS 654

Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG-GWSESYSDLLYSW--LQNVP 773
           G+ +D  +VR++ ++   +   G  WIE+   V++FV G        ++  +W  L+   
Sbjct: 655 GRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKM 714

Query: 774 ENVTARSSHSGLC--IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHC 831
             +  + + S +   ++EE+K E    HSEKLA+ F L+ +++   T+RI KN+R+CV C
Sbjct: 715 CKIGYKPNTSAVLHDVDEEKKIEKLRGHSEKLAICFGLLNTTKGT-TLRIFKNLRICVDC 773

Query: 832 HETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           H  +K++S +   EI + D+K  HHFK+G CSCGDYW
Sbjct: 774 HNASKFMSEVTGREIIIRDNKRFHHFKDGLCSCGDYW 810



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 166/588 (28%), Positives = 278/588 (47%), Gaps = 79/588 (13%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  +++AC  S    L   +H   + +   +DVFV   L+++Y K G +D A +VF  M
Sbjct: 33  TFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYM 92

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMV--QDGLFPDDFLFPKILQACGNCGDFEA 175
             RNL +W+++I  +S +   ++  ++   M+  ++GL PD      +L  C    D + 
Sbjct: 93  PVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQM 152

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +H L +KLG+S   RV NS++ +Y KCG L  A+  F+  + K+ V+WN+MI G   
Sbjct: 153 GIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCT 212

Query: 236 IGENDEAHRLFDKM-CREEIKLGVVT-FNIL--------IRSYNQLG--------QCD-- 275
            G   EA  LF +M  +E+I++  VT  NIL        +RS  +L         Q D  
Sbjct: 213 KGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDEL 272

Query: 276 VAMEMVKRMESLGI------------TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           VA   V      G+            T  V +W  +I G AQNG   +AL+L+ +M++ G
Sbjct: 273 VANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSG 332

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           ++P+  TI S + A   LK+L  G E+H   ++ G   D  +G SL+++Y  C E  +A 
Sbjct: 333 LVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSAR 392

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN- 442
            +FD +++K   SWN+MI+GY Q G    A  LF K+      P+ I    ++    Q  
Sbjct: 393 LLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQS 452

Query: 443 ----GNEDE-----------------AVDLFQRMG-------KNDKVK-RNTASWNSLIA 473
               G E                    +D++ + G         D +K ++ ASWN++IA
Sbjct: 453 ALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIA 512

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY-------LVASNKVKEIHGCV 526
            Y   G    ++ +F +M+     P+  T + +L  C++       L   N+++  HG  
Sbjct: 513 AYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHG-- 570

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYS-RTIFDGMSSKDIITWNSLI 573
               +E  L     ++D   ++G +  + R + +     D   W+SL+
Sbjct: 571 ----IEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLL 614



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 135/552 (24%), Positives = 249/552 (45%), Gaps = 62/552 (11%)

Query: 6   LTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQ-GAKVRRNTYINLL 64
           LT  Q L     +K N    +T +  LC  G + EA  +   +  Q   +V   T +N+L
Sbjct: 185 LTEAQMLFDKNNRK-NAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNIL 243

Query: 65  QACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLY 123
            AC++ + +   ++LH + +    + D  V    ++ YAKCG L  A  VF  M  + + 
Sbjct: 244 PACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVN 303

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
           +W+A+IG  +++   R+ + L+  M   GL PD F    +L A  +      GK +H  V
Sbjct: 304 SWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFV 363

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
           ++ G+     +  S+L++Y+ CG+   AR  F+ M+EK  V+WN+MISGY Q G  ++A 
Sbjct: 364 LRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDAL 423

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM----------------------- 280
            LF K+  +  +   +    ++ + +Q     +  E                        
Sbjct: 424 ILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMY 483

Query: 281 -----VKRMESL--GI-TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
                +K   S+  G+   D+ +W  +I+ +  +G   ++++LF+ M  VG MP+G T  
Sbjct: 484 AKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFI 543

Query: 333 SAISACTDLKALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER-VFDMIK 390
             ++ C+    +  G++  + +    G    +     +++M  +   L+ A R V +M +
Sbjct: 544 GILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPE 603

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFI------KMQESDVPPNVITWNVLISGYIQNGN 444
             D   W+S+++      +C    EL I      K+ E + P NV  +  L + Y  +G 
Sbjct: 604 QPDSRVWSSLLS------FCRNFGELEIGQIVAEKLLELE-PKNVENYVSLSNLYAGSGR 656

Query: 445 EDEAVDLFQRMGKNDKVKRNTA-SW-------NSLIAGYQQLGQKNNALGVFRKMQSSC- 495
            D+ V   ++M K+  ++++   SW       +S +AG   L Q       +RK++    
Sbjct: 657 WDD-VRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMC 715

Query: 496 ---FYPNCVTIL 504
              + PN   +L
Sbjct: 716 KIGYKPNTSAVL 727


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 264/836 (31%), Positives = 410/836 (49%), Gaps = 84/836 (10%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           L +A  +F+    R+  ++ +++  +SRD R +E   LF  + + G+  D  +F  +L+ 
Sbjct: 43  LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
                D   G+ +H   IK G      V  S++  Y+K       R+ F+ M E++ V W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------------- 261
            ++ISGY +   NDE   LF +M  E  +    TF                         
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222

Query: 262 ----------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQ 311
                     N LI  Y + G    A  +  + E       V TW  MISG+A NG   +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE----VKSVVTWNSMISGYAANGLDLE 278

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           AL +F  M    V  +  +  S I  C +LK L    ++H   VK GF  D  +  +L+ 
Sbjct: 279 ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV 338

Query: 372 MYSKCEELEAAERVFDMIK-DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
            YSKC  +  A R+F  I    +V SW +MI+G+ Q     +A +LF +M+   V PN  
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398

Query: 431 TWNV-------------------------------LISGYIQNGNEDEAVDLFQRMGKND 459
           T++V                               L+  Y++ G  +EA  +F   G +D
Sbjct: 399 TYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS--GIDD 456

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS-NK 518
           K   +  +W++++AGY Q G+   A+ +F ++      PN  T  S+L  CA   AS  +
Sbjct: 457 K---DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 513

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
            K+ HG  ++  L+SSL V ++L+  YAK GNI  +  +F     KD+++WNS+I GY  
Sbjct: 514 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 573

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           HG    ALD+F +MK   +K +  TF+ +  A + AG+V+ G+K F  +    +I P  E
Sbjct: 574 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKE 633

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
           H S M+DLY R+G+LE+AM+ IE+MP    S+IW  +L ACR+H   +L  LA E++  +
Sbjct: 634 HNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAM 693

Query: 699 EPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS 758
           +P D     L+  +YA  G  ++  KVRKL  E   +   G  WIEVKN  Y+F+ G  S
Sbjct: 694 KPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRS 753

Query: 759 ESYSDLLYSWLQNVPENVT-----ARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSS 813
               D +Y  L+++   +        +S+    I++E KE +   HSE+LA+AF LI + 
Sbjct: 754 HPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATP 813

Query: 814 QAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF-KNGQCSCGDYW 868
           +    + I+KN+R+C  CH   K ++ +   EI + DS   HHF  +G CSCGD+W
Sbjct: 814 KGSPLL-IIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 178/643 (27%), Positives = 298/643 (46%), Gaps = 93/643 (14%)

Query: 16  LTKKSNPRFRDTHLDFLCG---NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNS 72
           L  KS  R R++++  L G   +GR  EA  +  +I   G ++  + + ++L+       
Sbjct: 49  LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108

Query: 73  IHLARKLH------AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWS 126
               R+LH       FL+     DV V T L+  Y K     D R+VF++M+ERN+ TW+
Sbjct: 109 ELFGRQLHCQCIKFGFLD-----DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWT 163

Query: 127 AMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL 186
            +I  Y+R+    EV+ LF  M  +G  P+ F F   L      G    G  +H++V+K 
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223

Query: 187 GMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF 246
           G+     V NS++ +Y+KCG +  AR  F+  + K  V WNSMISGY   G + EA  +F
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 283

Query: 247 DKMCREEIKLGVVTFNILI---------RSYNQL-----------------------GQC 274
             M    ++L   +F  +I         R   QL                        +C
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKC 343

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
              ++ ++  + +G   +V +WT MISGF QN    +A+DLF EM   GV PN  T +  
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVI 403

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           ++A   +       E+H+  VK  +     VG +L++ Y K  ++E A +VF  I DKD+
Sbjct: 404 LTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---------------------- 432
            +W++M+AGY Q G    A ++F ++ +  + PN  T+                      
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519

Query: 433 --------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
                         + L++ Y + GN + A ++F+R  + D V     SWNS+I+GY Q 
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV-----SWNSMISGYAQH 574

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           GQ   AL VF++M+      + VT + V  AC +     + ++    ++R    +     
Sbjct: 575 GQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEH 634

Query: 539 NS-LIDTYAKSGNIVYSRTIFDGMSSKDIIT-WNSLICGYVLH 579
           NS ++D Y+++G +  +  + + M +    T W +++    +H
Sbjct: 635 NSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVH 677


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 254/794 (31%), Positives = 395/794 (49%), Gaps = 89/794 (11%)

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+  ++F FP +L+AC    D   GK +H +V+  G      V NS++ +Y KCG    A
Sbjct: 5   GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI----------------- 254
           R  F+++ ++  V+WN++ S Y     + EA  LF  M    I                 
Sbjct: 65  RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124

Query: 255 --------------KLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                         KLG      + N L+  Y ++G  + A  +   +      PD+ +W
Sbjct: 125 EDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAK----PDIVSW 180

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             +I+G   +    +AL+L +EM+  G+ PN  T++SA+ AC  +    +G ++HS  +K
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
           M    D  +G  LI+MYSKC  ++ A  VF ++ ++D+ +WN++I+G+ Q     +A  L
Sbjct: 241 MDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASL 300

Query: 417 FIKMQESDVPPNVITW-----------------------------------NVLISGYIQ 441
           F  M    +  N  T                                    N LI  Y +
Sbjct: 301 FPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGK 360

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G+ ++A  +F+     D V      + SL+  Y Q GQ   AL ++ +MQ     P+  
Sbjct: 361 CGHVEDATRVFEESPIVDLVL-----FTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSF 415

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
              S+L ACA L A  + K++H  +L+    S +   NSL++ YAK G+I  +   F  +
Sbjct: 416 VCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRI 475

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
             + I++W+++I G   HG+   AL LF QM   G+ PN  T +S++ A + AG+V   K
Sbjct: 476 PVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAK 535

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
             F S+   + I PM EHY+ MIDL GR+GKLE AME +  MP + ++ +W ALL A RI
Sbjct: 536 HYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARI 595

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H NIDL   A E L  LEP       L+  IYA  G  +   +VR+L ++   +   G  
Sbjct: 596 HKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMS 655

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------IEEEEKEEI 795
           W+EVK+ VYTF+ G  S S S  +Y+ L  +  ++  ++ +  +       +E  EKE++
Sbjct: 656 WLEVKDKVYTFIVGDRSHSRSTEIYAKLDEL-SDLLKKAGYVPMVEIDLHDVERSEKEQL 714

Query: 796 SGIHSEKLALAFALIGSSQ-APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCL 854
              HSEKLA+AF LI +   AP  IR+ KN+R+C  CH   K++S +   EI + D+   
Sbjct: 715 LYHHSEKLAVAFGLIATPPGAP--IRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRF 772

Query: 855 HHFKNGQCSCGDYW 868
           HHF+ G CSCG+YW
Sbjct: 773 HHFREGSCSCGEYW 786



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 216/450 (48%), Gaps = 34/450 (7%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKL 97
            EA+++   +   G +    +  +++  C         RK+H +L  L  + D F    L
Sbjct: 93  GEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANAL 152

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           + +YAK G L+DA  VF+++ + ++ +W+A+I      +     +EL   M + G+ P+ 
Sbjct: 153 VDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNM 212

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
           F     L+AC      E G+ +HS +IK+ M     +   ++ +Y KC  +  AR  F+ 
Sbjct: 213 FTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKL 272

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL------ 271
           M E+D +AWN++ISG+ Q  E++EA  LF  M  E I     T + +++S   L      
Sbjct: 273 MPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMC 332

Query: 272 --------------------------GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ 305
                                     G+C    +  +  E   I  D+  +T +++ +AQ
Sbjct: 333 RQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESPIV-DLVLFTSLVTAYAQ 391

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
           +G+  +AL L+ EM   G+ P+    +S ++AC  L A   G ++H   +K GF  D+  
Sbjct: 392 DGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFA 451

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
           GNSL+NMY+KC  +E A   F  I  + + SW++MI G  Q GY  +A +LF +M +  V
Sbjct: 452 GNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGV 511

Query: 426 PPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           PPN IT   ++      G   EA   F  M
Sbjct: 512 PPNHITLVSVLCACNHAGLVAEAKHYFNSM 541



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 164/641 (25%), Positives = 289/641 (45%), Gaps = 85/641 (13%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT--EIDVFVKTKLLSVYAKCGCLDD 109
           G K     + ++L+AC  +  + L +++H  + +VT  + D FV   L+ +YAKCG   D
Sbjct: 5   GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIV-VVTGFDSDEFVANSLVILYAKCGGFGD 63

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           AR +F+ + +R++ +W+A+   Y       E V LF  MV  G+ P++F    ++  C  
Sbjct: 64  ARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTG 123

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
             D   G+ +H  +IKLG        N+++ +Y K G L  A   F+ + + D V+WN++
Sbjct: 124 LEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAI 183

Query: 230 ISGYFQIGENDEAHRLFDKMCREEI--------------------KLGVVTFNILIR--- 266
           I+G      +  A  L  +M +  +                    +LG    + LI+   
Sbjct: 184 IAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDM 243

Query: 267 ---SYNQLGQCDV-----AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
              S+  +G  D+     +M+  + +  L    D+  W  +ISG +QN    +A  LF  
Sbjct: 244 GSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPL 303

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   G+  N  T+++ + +   L+A  M  +IH+L++K GF  D  V NSLI+ Y KC  
Sbjct: 304 MHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGH 363

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP----------- 427
           +E A RVF+     D+  + S++  Y Q G   +A  L+++MQ+  + P           
Sbjct: 364 VEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNA 423

Query: 428 ------------------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
                                   ++   N L++ Y + G+ ++A   F R+       R
Sbjct: 424 CASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIP-----VR 478

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC--AYLVASNKVKE 521
              SW+++I G  Q G    AL +F++M      PN +T++SVL AC  A LVA  K   
Sbjct: 479 GIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAK-HY 537

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
            +   +   +E        +ID   ++G +  +  + + M    + + W +L+    +  
Sbjct: 538 FNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARI-- 595

Query: 581 FWHAALDLFDQMKS--FGLKPNR-GTFLSIILAHSLAGMVD 618
             H  +DL +Q       L+P + GT + +   ++  GM D
Sbjct: 596 --HKNIDLGEQAAEMLLALEPEKSGTHVLLANIYASVGMWD 634



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 213/473 (45%), Gaps = 74/473 (15%)

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M  +G+  N     S + ACT  K L +G ++H + V  GF  D  V NSL+ +Y+KC  
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS- 437
              A  +FD I D+ V SWN++ + Y  +   G+A  LF  M  S + PN  + + +I+ 
Sbjct: 61  FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120

Query: 438 --------------GY-IQNGNEDEA------VDLFQRMGK--------NDKVKRNTASW 468
                         GY I+ G + +A      VD++ ++G         ++  K +  SW
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           N++IAG       + AL + R+M  S   PN  T+ S L ACA +      +++H  +++
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
             + S   +   LID Y+K  ++  +R +F  M  +D+I WN++I G+  +     A  L
Sbjct: 241 MDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASL 300

Query: 589 FDQMKSFGLKPNRGTFLSI---------------ILAHSLAGMVDLGKKVFCSITECYQI 633
           F  M + G+  N+ T  ++               I A SL    +    V  S+ + Y  
Sbjct: 301 FPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGK 360

Query: 634 IPMIEH---------------YSAMIDLYGRSGKLEEAMEF---IEDMPIEPDSSIWEAL 675
              +E                +++++  Y + G+ EEA+     ++D  I+PDS +  +L
Sbjct: 361 CGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSL 420

Query: 676 LTAC------RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDA 722
           L AC           + + +L    + D+  G+ L+      +YA CG  EDA
Sbjct: 421 LNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLV-----NMYAKCGSIEDA 468



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 141/284 (49%), Gaps = 2/284 (0%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLL 98
           EA ++   + T+G    + T   +L++     + ++ R++HA  L    E D +V   L+
Sbjct: 296 EAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLI 355

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
             Y KCG ++DA  VFE+    +L  +++++ AY++D +  E + L+  M   G+ PD F
Sbjct: 356 DTYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSF 415

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
           +   +L AC +   +E GK +H  ++K G        NS++ +Y KCG +  A   F  +
Sbjct: 416 VCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRI 475

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
             +  V+W++MI G  Q G   EA +LF +M +  +    +T   ++ + N  G    A 
Sbjct: 476 PVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAK 535

Query: 279 EMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
                M+ L GI P    + CMI    + G+   A++L  +M F
Sbjct: 536 HYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPF 579


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 243/677 (35%), Positives = 358/677 (52%), Gaps = 75/677 (11%)

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           ++ F+ + RS    G    A+ +   +E     P++F W  MI G + +   + AL  F 
Sbjct: 67  LIEFSAVSRS----GDISYAISLFNSIEE----PNLFIWNSMIRGLSMSLSPALALVFFV 118

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
            M + GV PN  T    + +C  L +   G +IH+  +K+GF  DV +  SLINMY++  
Sbjct: 119 RMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSG 178

Query: 378 ELEAAERVFDM-------------------------------IKDKDVYSWNSMIAGYCQ 406
           E+  A+ VFD                                +  KDV SWN+MIAGY Q
Sbjct: 179 EMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQ 238

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN-----GN------EDEA------- 448
            G   +A  LF  M++++VPPN  T   ++S   Q+     GN      ED         
Sbjct: 239 MGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKL 298

Query: 449 ----VDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
               +D++ + G         +D ++R+  SWN +I GY  +     AL +FR+M +S  
Sbjct: 299 VNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGV 358

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            P  +T LS+LP+CA+L A +  K IH  + +     S  +  SLID YAK GNIV +R 
Sbjct: 359 EPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQ 418

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           +FDGM  K + +WN++ICG  +HG    A +LF +M S G++PN  TF+ I+ A   AG+
Sbjct: 419 VFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGL 478

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           VDLG++ F S+ + Y+I P  +HY  MIDL GR+G  EEA   +++M ++PD +IW +LL
Sbjct: 479 VDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLL 538

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
            ACR HG ++L  L  ERLF+LEP +     L+  IYA  GK +D  ++R    +   + 
Sbjct: 539 GACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRLNDRGMKK 598

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEE 791
             G   IEV N+V+ F+ G      S+ +Y  L+ V E +      A +S     ++EE 
Sbjct: 599 VPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRMLEEVDEQLKVFGFVADTSEVLYDMDEEW 658

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           KE     HSEKLA+AF LI S++    IRI+KN+R+C +CH   K +S + + EI   D 
Sbjct: 659 KEGALSHHSEKLAIAFGLI-STKPGTPIRIIKNLRVCRNCHSATKLISKIFNREIIARDR 717

Query: 852 KCLHHFKNGQCSCGDYW 868
              HHFK+G CSC DYW
Sbjct: 718 NRFHHFKDGSCSCNDYW 734



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 139/525 (26%), Positives = 228/525 (43%), Gaps = 79/525 (15%)

Query: 55  VRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL--SVYAKCGCLDDAR 111
           ++ +  + LL  C    SI   +++HA  +       +F  +KL+  S  ++ G +  A 
Sbjct: 27  LQEHPSLKLLSKC---QSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAI 83

Query: 112 EVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG 171
            +F  + E NL+ W++MI   S        +  F  M+  G+ P+ + FP +L++C    
Sbjct: 84  SLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLA 143

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL----------------------- 208
               GK +H+ V+KLG      +  S++ +Y + G++                       
Sbjct: 144 SAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIA 203

Query: 209 ---IW-----ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
              +W     AR+ F+ M  KD V+WN+MI+GY Q+G + EA  LF+ M +  +     T
Sbjct: 204 GYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNEST 263

Query: 261 F-----------------------------------NILIRSYNQLGQCDVAMEMVKRME 285
                                               N LI  Y++ G    A E+   M 
Sbjct: 264 IVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDM- 322

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
              +  DV +W  MI G+       +AL LF+EM   GV P  +T  S + +C  L A+ 
Sbjct: 323 ---LERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAID 379

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
           +G  IH+   K   +    +  SLI++Y+KC  + AA +VFD +K K + SWN+MI G  
Sbjct: 380 LGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLA 439

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
             G   KA+ELF KM    + PN IT+  ++S     G  D     F  M ++ K+   +
Sbjct: 440 MHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKS 499

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             +  +I    + G    A  + + M+     P+     S+L AC
Sbjct: 500 QHYGCMIDLLGRAGLFEEAESLLQNMEVK---PDGAIWGSLLGAC 541



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 161/316 (50%), Gaps = 9/316 (2%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDVF 92
           GR  EA+ + + +         +T +++L AC  SN++ L   + +++    L + + + 
Sbjct: 240 GRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLV 299

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
               L+ +Y+KCG L  ARE+F+DM ER++ +W+ MIG Y+    ++E + LF  M+  G
Sbjct: 300 --NALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASG 357

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P +  F  IL +C + G  + GK +H+ + K   S    +  S++ +Y KCG ++ AR
Sbjct: 358 VEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAAR 417

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + F+ M  K   +WN+MI G    G+ D+A  LF KM  + I+   +TF  ++ +    G
Sbjct: 418 QVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAG 477

Query: 273 QCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
             D+  +    M +   I+P    + CMI    + G   +A  L + M    V P+G   
Sbjct: 478 LVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNME---VKPDGAIW 534

Query: 332 TSAISACTDLKALAMG 347
            S + AC D   + +G
Sbjct: 535 GSLLGACRDHGRVELG 550



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 115/474 (24%), Positives = 206/474 (43%), Gaps = 68/474 (14%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCG----- 105
           G +    T+  LL++C    S H  +++HA  L L    DVF+ T L+++YA+ G     
Sbjct: 124 GVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNA 183

Query: 106 --------------------------CLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
                                      +D AR++F++M  +++ +W+AMI  Y++  R +
Sbjct: 184 QLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSK 243

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E + LF  M +  + P++     +L AC      + G  M S +   G+    ++ N+++
Sbjct: 244 EALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALI 303

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +Y KCG L  AR  F+ M E+D ++WN MI GY  +    EA  LF +M    ++   +
Sbjct: 304 DMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEI 363

Query: 260 TFNILIRSYNQLGQCDVA----------------------MEMVKRMESLGITPDVF--- 294
           TF  ++ S   LG  D+                       +++  +  ++     VF   
Sbjct: 364 TFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGM 423

Query: 295 ------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
                 +W  MI G A +G+  +A +LF +MS  G+ PN +T    +SAC     + +G 
Sbjct: 424 KIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQ 483

Query: 349 EIHSLAVK-MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIAGYCQ 406
           +  S  V+    +        +I++  +    E AE +   ++ K D   W S++ G C+
Sbjct: 484 QFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLL-GACR 542

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDK 460
                +  EL  +      P N   + +L + Y   G  D+   +  R+  ND+
Sbjct: 543 DHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAGKWDDVARIRTRL--NDR 594


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 269/764 (35%), Positives = 388/764 (50%), Gaps = 78/764 (10%)

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
            K +H+L++  G      +   ++ +Y   G +  +R  F+ + +KD   WNSMIS Y  
Sbjct: 135 AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVH 194

Query: 236 IGENDEAHRLFDKMCR-EEIKLGVVTFNILIRSYN-------------QLG---QCDVAM 278
            G   EA   F ++    EI+    TF  ++++               +LG      VA 
Sbjct: 195 NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAA 254

Query: 279 EMVKRMESLGITP------------DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            ++      G T             D+ +W  MISG  QNG  +QALD+  EM   G+  
Sbjct: 255 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 314

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           N VT+ S +  C  L  ++  M IH   +K G   D+ V N+LINMY+K   LE A + F
Sbjct: 315 NFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARKAF 374

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS--------- 437
             +   DV SWNS+IA Y Q      A+  F+KMQ +   P+++T   L S         
Sbjct: 375 QQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCK 434

Query: 438 ------GYIQNGN---ED-----EAVDLFQRMGKNDKVKR--------NTASWNSLIAGY 475
                 G+I       ED       VD++ ++G  D   +        +  SWN+LI GY
Sbjct: 435 NSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLITGY 494

Query: 476 QQLGQKNNALGVFRKMQSSC--FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
            Q G  + A+ V+ KM   C    PN  T +S+LPA A++ A  +   IHG V++ +L  
Sbjct: 495 AQNGLASEAIEVY-KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKTNLHL 553

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
            + V   LID Y K G +V + ++F  +  +  +TWN++I  + +HG     L LF +M 
Sbjct: 554 DVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEML 613

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
             G+KP+  TF+S++ A S +G V+ GK  F  + E Y I P ++HY  M+DL GR+G L
Sbjct: 614 DEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMVDLLGRAGYL 672

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIY 713
           E A  FI+DMP++PD+SIW ALL ACRIHGNI+L   A +RLF+++  +V    L+  IY
Sbjct: 673 EMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIY 732

Query: 714 AICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP 773
           A  GK E   KVR L RE   + + G   IEV   V  F TG  S      +Y  L+   
Sbjct: 733 ANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELR--- 789

Query: 774 ENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
             +TA+    G           +EE+EKE I   HSE+LA+AF +I S+     IRI KN
Sbjct: 790 -VLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGII-STPPKSPIRIFKN 847

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +R+C  CH   K++S +   EI + DS   HHFK+G CSCGDYW
Sbjct: 848 LRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 241/516 (46%), Gaps = 52/516 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDV 91
           NG  +EAI     +    +++R +  T+  +L+AC    ++   R++H +   L  + +V
Sbjct: 195 NGHFHEAIGCFYQLLLV-SEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLGFQWNV 250

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV   L+ +Y++ G    AR +F+DM  R++ +W+AMI    ++    + +++   M  +
Sbjct: 251 FVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLE 310

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+  +      IL  C   GD     L+H  VIK G+     V N+++ +Y K G L  A
Sbjct: 311 GIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDA 370

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---------------------- 249
           R+ F+ M   D V+WNS+I+ Y Q  +   AH  F KM                      
Sbjct: 371 RKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQS 430

Query: 250 --CREE-------IKLG-----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
             C+         ++ G     VV  N ++  Y +LG  D A ++ + +    +  DV +
Sbjct: 431 RDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEII----LVKDVIS 486

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           W  +I+G+AQNG  S+A++++K M     ++PN  T  S + A   + AL  GM IH   
Sbjct: 487 WNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRV 546

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           +K     DV V   LI++Y KC  L  A  +F  +  +   +WN++I+ +   G+  K  
Sbjct: 547 IKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTL 606

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
           +LF +M +  V P+ +T+  L+S    +G  +E    F R+ +   +K +   +  ++  
Sbjct: 607 KLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF-RLMQEYGIKPSLKHYGCMVDL 665

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             + G    A G  + M      P+     ++L AC
Sbjct: 666 LGRAGYLEMAYGFIKDMP---LQPDASIWGALLGAC 698



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 130/518 (25%), Positives = 224/518 (43%), Gaps = 55/518 (10%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  NG   +A+ VLD +  +G K+   T +++L  C     I  A  +H + +    E D
Sbjct: 291 LIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFD 350

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +FV   L+++YAK G L+DAR+ F+ M   ++ +W+++I AY ++         F  M  
Sbjct: 351 LFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQL 410

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG--MSCVRRVRNSVLAVYVKCGKL 208
           +G  PD      +        D +  + +H  +++ G  M  V  + N+V+ +Y K G L
Sbjct: 411 NGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDV-VIGNAVVDMYAKLGLL 469

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--CREEIKLGVVTFNILIR 266
             A + FE +  KD ++WN++I+GY Q G   EA  ++  M  C+E I     T+  ++ 
Sbjct: 470 DSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP-NQGTWVSILP 528

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR------------------ 308
           +Y  +G     M +  R+    +  DVF  TC+I  + + GR                  
Sbjct: 529 AYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT 588

Query: 309 -------------TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
                          + L LF EM   GV P+ VT  S +SAC+    +  G     L  
Sbjct: 589 WNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQ 648

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAER-VFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           + G    +     ++++  +   LE A   + DM    D   W +++ G C+  +     
Sbjct: 649 EYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALL-GACRI-HGNIEL 706

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
             F   +  +V    + + VL+S    N  + E VD  + + +   +K+ T  W+++   
Sbjct: 707 GKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKK-TPGWSTI--- 762

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTI---LSVLPA 509
                + N  + VF     S  +P C  I   L VL A
Sbjct: 763 -----EVNRKVDVFYTGNQS--HPKCKEIYEELRVLTA 793


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 256/845 (30%), Positives = 411/845 (48%), Gaps = 89/845 (10%)

Query: 30   DFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTE 88
            +F    G L+  + V   +  +G       Y   L+ C     I L  ++H   +    +
Sbjct: 647  EFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFD 706

Query: 89   IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            +DV+++  L++ Y +C  L+ A +VF +M       W+  I    + ++ ++ VELF  M
Sbjct: 707  LDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKM 766

Query: 149  VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
                L  +     ++LQACG  G   A K +H  V + G+     + N ++++Y K GKL
Sbjct: 767  QFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKL 826

Query: 209  IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
              AR                               R+FD M          ++N +I SY
Sbjct: 827  ELAR-------------------------------RVFDSMENRNTS----SWNSMISSY 851

Query: 269  NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
              LG  + A  +   +ES  + PD+ TW C++SG   +G   + L++ + M   G  PN 
Sbjct: 852  AALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNS 911

Query: 329  VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
             ++TS + A ++L  L MG E H   ++ GF  DV VG SLI+MY K   L +A+ VFD 
Sbjct: 912  SSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDN 971

Query: 389  IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
            +K++                                   N+  WN L+SGY   G  ++A
Sbjct: 972  MKNR-----------------------------------NIFAWNSLVSGYSFKGMFEDA 996

Query: 449  VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
            + L  +M K + +K +  +WN +I+GY   G    A           F PN  +I  +L 
Sbjct: 997  LRLLNQMEK-EGIKPDLVTWNGMISGYAMWGCARKA-----------FMPNSASITCLLR 1044

Query: 509  ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT 568
            ACA L    K KEIH   +R      + V  +LID Y+KS ++  +  +F  + +K + +
Sbjct: 1045 ACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLAS 1104

Query: 569  WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT 628
            WN +I G+ + G    A+ +F++M+  G+ P+  TF +++ A   +G++  G K F S+ 
Sbjct: 1105 WNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMI 1164

Query: 629  ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
              Y+I+P +EHY  M+DL GR+G L+EA + I  MP++PD++IW ALL +CRIH N+  A
Sbjct: 1165 TDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFA 1224

Query: 689  VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL 748
              A + LF LEP +     L++ +Y+I  + ED   +R+L      RN     WI++   
Sbjct: 1225 ETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQR 1284

Query: 749  VYTFVTGGWSESYSDLLYSWL-QNVPENVTARSSHSGLCI----EEEEKEEISGIHSEKL 803
            V+ F +       +  +Y  L Q V E           C+    +E EK++I   H+EKL
Sbjct: 1285 VHVFSSDEKPHPDAGKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKL 1344

Query: 804  ALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCS 863
            A+ + LI   +A   IR++KN R+C  CH  AKY+S++   E+FL D    HHF+ G+CS
Sbjct: 1345 AITYGLI-KMKAGEPIRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCS 1403

Query: 864  CGDYW 868
            C D+W
Sbjct: 1404 CNDFW 1408



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/307 (20%), Positives = 140/307 (45%), Gaps = 12/307 (3%)

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ-LGQKNNALGVFRKMQS 493
           LIS Y+  G+   A  +F  +G    + RN   WNS +  ++   G  +  L VF+++  
Sbjct: 613 LISSYLGFGDFWSAAMVFY-VG----LPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHG 667

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
                +       L  C  ++      EIHGC+++R  +  + +  +L++ Y +   +  
Sbjct: 668 KGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEK 727

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           +  +F  M + + + WN  I   +        ++LF +M+   LK    T + ++ A   
Sbjct: 728 ANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGK 787

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
            G ++  K++   +   + +   +   + +I +Y ++GKLE A    + M    ++S W 
Sbjct: 788 MGALNAAKQIHGYVFR-FGLDSDVSLCNPLISMYSKNGKLELARRVFDSME-NRNTSSWN 845

Query: 674 ALLTACRIHGNIDLAVLAIERL--FDLEPGDVLIQRLILQIYAICGKPEDALKV-RKLER 730
           +++++    G ++ A      L   D++P D++    +L  + + G  E+ L + ++++ 
Sbjct: 846 SMISSYAALGFLNDAWSLFYELESSDMKP-DIVTWNCLLSGHFLHGYKEEVLNILQRMQG 904

Query: 731 ENTRRNS 737
           E  + NS
Sbjct: 905 EGFKPNS 911


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 264/881 (29%), Positives = 432/881 (49%), Gaps = 97/881 (11%)

Query: 70  SNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMI 129
           S S+     LH+ L L + +       LL++Y++C     AR VF+++ +    +WS+++
Sbjct: 17  SRSLFAGAHLHSHL-LKSGLLAGFSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLV 75

Query: 130 GAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMS 189
            AYS +   R+ +  F  M   G+  ++F  P +L+      D   G  +H+L +   + 
Sbjct: 76  TAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAP---DVRFGAQVHALAVATRLV 132

Query: 190 CVRRVRNSVLAVYVKCGKLIWARRFFESM----DEKDGVAWNSMISGYFQIGENDEAHRL 245
               V N+++AVY   G +  ARR F+       E++ V+WN+MIS Y +  ++ +A  +
Sbjct: 133 HDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGV 192

Query: 246 FDKMC-----------------------------------REEIKLGVVTFNILIRSYNQ 270
           F +M                                    R   +  V T N L+  Y++
Sbjct: 193 FREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSK 252

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           LG  ++A  + ++M +     DV +W   ISG   +G   +AL+L  +M   G++PN  T
Sbjct: 253 LGDIEMAATVFEKMPA----ADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFT 308

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
           ++S + AC    A  +G +IH   VK     D  V   L++MY+K   L+ A +VFD + 
Sbjct: 309 LSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMP 368

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES--DVPPNVITW---------------- 432
            +D+  WN++I+G    G  G+   LF +M++   D+  N  T                 
Sbjct: 369 RRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHT 428

Query: 433 -------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
                              N LI  Y + G  D A+ +F+    +D +   T     ++ 
Sbjct: 429 RQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTT-----MMT 483

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
              Q     +A+ +F +M      P+   + S+L AC  L A  + K++H  +++R   S
Sbjct: 484 ALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTS 543

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
            +   N+L+  YAK G+I  +   F G+  + I++W+++I G   HG    ALDLF +M 
Sbjct: 544 DVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRML 603

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
             G+ PN  T  S++ A + AG+VD  KK F S+ E + I    EHY+ MID+ GR+GKL
Sbjct: 604 DEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKL 663

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIY 713
           E+AME + +MP + ++++W ALL A R+H + +L  +A E+LF LEP       L+   Y
Sbjct: 664 EDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEPEKSGTHVLLANTY 723

Query: 714 AICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP 773
           A  G  ++  KVRKL +++  +      W+E+K+ V+TF+ G  S   +  +Y  L  + 
Sbjct: 724 ASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVGDKSHPMTRDIYGKLAELG 783

Query: 774 ENVTARSSHSGL-----CIEEEEKEEISGIHSEKLALAFALIGS-SQAPHTIRIVKNIRM 827
           + +        +      ++  EKE +   HSE+LA+AFALI + S AP  IR+ KN+R+
Sbjct: 784 DLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERLAVAFALISTPSGAP--IRVKKNLRI 841

Query: 828 CVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           C  CH   KY+S +   EI + D    HHF NG CSCGDYW
Sbjct: 842 CRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSCGDYW 882



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 230/495 (46%), Gaps = 42/495 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFV 93
           N +  +AI V   +   G +     +  ++ AC  S  +   R++H A +    E DVF 
Sbjct: 183 NDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFT 242

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y+K G ++ A  VFE M   ++ +W+A I            +EL   M   GL
Sbjct: 243 ANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGL 302

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+ F    +L+AC   G F  G+ +H  ++K        V   ++ +Y K G L  AR+
Sbjct: 303 VPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARK 362

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI------------------- 254
            F+ M  +D + WN++ISG    G + E   LF +M +E +                   
Sbjct: 363 VFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASS 422

Query: 255 --------------KLGVVT----FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                         K+G+++     N LI SY + GQ D A+++ K   S     D+ + 
Sbjct: 423 EAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRS----DDIISS 478

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           T M++  +Q      A+ LF +M   G+ P+   ++S ++ACT L A   G ++H+  +K
Sbjct: 479 TTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIK 538

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
             FT DV  GN+L+  Y+KC  +E A+  F  + ++ + SW++MI G  Q G+  +A +L
Sbjct: 539 RQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDL 598

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F +M +  V PN IT   ++S     G  D+A   F+ M +   + R    +  +I    
Sbjct: 599 FHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILG 658

Query: 477 QLGQKNNALGVFRKM 491
           + G+  +A+ +   M
Sbjct: 659 RAGKLEDAMELVNNM 673



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 169/672 (25%), Positives = 289/672 (43%), Gaps = 100/672 (14%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVF 92
           NG   +A+    ++  +G          +L+   D   +    ++HA L + T +  DVF
Sbjct: 81  NGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPD---VRFGAQVHA-LAVATRLVHDVF 136

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDM----RERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
           V   L++VY   G +D+AR +F++      ERN  +W+ MI AY ++ +  + + +F  M
Sbjct: 137 VANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREM 196

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           V  G  P++F F  ++ AC    D EAG+ +H  V++ G        N+++ +Y K G +
Sbjct: 197 VWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDI 256

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             A   FE M   D V+WN+ ISG    G +  A  L  +M    +   V T + ++++ 
Sbjct: 257 EMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKAC 316

Query: 269 NQLGQCDVAME----MVKRME------SLGITP---------------------DVFTWT 297
              G  ++  +    MVK +       ++G+                       D+  W 
Sbjct: 317 AGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWN 376

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVG--VMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
            +ISG + +GR  + L LF  M   G  +  N  T+ S + +    +A+    ++H+LA 
Sbjct: 377 ALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAE 436

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K+G   D  V N LI+ Y KC +L+ A +VF   +  D+ S  +M+    Q  +   A +
Sbjct: 437 KIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIK 496

Query: 416 LFIKMQESDVPP-----------------------------------NVITWNVLISGYI 440
           LF++M    + P                                   +V   N L+  Y 
Sbjct: 497 LFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYA 556

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           + G+ ++A   F  +      +R   SW+++I G  Q G    AL +F +M      PN 
Sbjct: 557 KCGSIEDADMAFSGL-----PERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNH 611

Query: 501 VTILSVLPAC--AYLVASNK-----VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
           +T+ SVL AC  A LV   K     +KE  G  + R+ E        +ID   ++G +  
Sbjct: 612 ITLTSVLSACNHAGLVDDAKKYFESMKETFG--IDRTEEH----YACMIDILGRAGKLED 665

Query: 554 SRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR-GTFLSIILAH 611
           +  + + M    +   W +L+    +H      L      K F L+P + GT + +   +
Sbjct: 666 AMELVNNMPFQANAAVWGALLGASRVH--RDPELGRMAAEKLFTLEPEKSGTHVLLANTY 723

Query: 612 SLAGMVDLGKKV 623
           + AGM D   KV
Sbjct: 724 ASAGMWDEMAKV 735


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 252/787 (32%), Positives = 405/787 (51%), Gaps = 58/787 (7%)

Query: 90  DVFVKTKLLSVYAKCGCLD--DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           D F  ++LL    +   ++   + ++F  +   N +  + M+  Y +     + + ++  
Sbjct: 57  DSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKF 116

Query: 148 MVQDGLFPDDFLFPKILQACG-NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M++  +  D++ +P + Q+C     +F+ GK +   V+K+G      ++N+++ +Y  CG
Sbjct: 117 MLESNVAADNYTYPILFQSCSIRLAEFD-GKCIQDHVLKVGFDSDVYIQNTLINMYAVCG 175

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            L  AR+ F+     D V+WNSM++GY  +G  +EA  ++D+M        V+  N +I 
Sbjct: 176 NLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPER----NVIASNSMIV 231

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            + + G  + A ++   M+      D+ +W+ +IS + QN    +AL LFKEM+  G+M 
Sbjct: 232 LFGKKGNVEEACKLFNEMKQ----KDLVSWSALISCYEQNEMYEEALILFKEMNANGIMV 287

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           + V + S +SAC+ L  +  G  +H L VK+G    V + N+LI+MYS CEE+  A+++F
Sbjct: 288 DEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLF 347

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
                 D  SWNSMI+GY + G   KA  LF  M + D     ++W+ +ISGY Q     
Sbjct: 348 SESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKD----NVSWSAMISGYAQQDRFT 403

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           E + LFQ M                    Q  G K                P+   ++SV
Sbjct: 404 ETLVLFQEM--------------------QIEGTK----------------PDETILVSV 427

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
           + AC +L A ++ K IH  + +  L+ ++ +  +LI+ Y K G +  +  +F G+  K +
Sbjct: 428 ISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGV 487

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
            TWN+LI G  ++G    +L  F +MK  G+ PN  TF++++ A    G+VD G + F S
Sbjct: 488 STWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNS 547

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
           + + ++I P I+HY  M+DL GR+G L+EA E IE MP+ PD S W ALL AC+ +G+ +
Sbjct: 548 MIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNE 607

Query: 687 LAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
                  +L +L P       L+  IYA  G   D L+VR + R++    + G   IE  
Sbjct: 608 TGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAH 667

Query: 747 NLVYTFVTGGWSESYSDLLYSWLQNVP-----ENVTARSSHSGLCIEEEEKEEISGIHSE 801
             V+ F+ G  +   ++ +   L  +      E     +    L I+EEEKE     HSE
Sbjct: 668 GRVHEFLAGDKTHPQNEHIEHMLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHSE 727

Query: 802 KLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQ 861
           KLA+AF LI +   P  IRIVKN+R+C  CH  AK +S   + EI + D    HHFK G 
Sbjct: 728 KLAIAFGLI-AIDPPTPIRIVKNLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGS 786

Query: 862 CSCGDYW 868
           CSC DYW
Sbjct: 787 CSCMDYW 793



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 209/425 (49%), Gaps = 42/425 (9%)

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           + E +V     ++ ++ K G +++A ++F +M++++L +WSA+I  Y +++ + E + LF
Sbjct: 218 MPERNVIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILF 277

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M  +G+  D+ +   +L AC        GKL+H LV+K+G+     ++N+++ +Y  C
Sbjct: 278 KEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSC 337

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            +++ A++ F      D ++WNSMISGY + GE ++A  LFD M  ++     V+++ +I
Sbjct: 338 EEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKD----NVSWSAMI 393

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             Y Q                                     R ++ L LF+EM   G  
Sbjct: 394 SGYAQ-----------------------------------QDRFTETLVLFQEMQIEGTK 418

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P+   + S ISACT L AL  G  IH+   K G   ++++G +LINMY K   +E A  V
Sbjct: 419 PDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEV 478

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
           F  +++K V +WN++I G    G   K+ + F +M+E  V PN IT+  ++      G  
Sbjct: 479 FKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLV 538

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           DE    F  M +  K+  N   +  ++    + G    A  +   M  +   P+  T  +
Sbjct: 539 DEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMA---PDVSTWGA 595

Query: 506 VLPAC 510
           +L AC
Sbjct: 596 LLGAC 600



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 127/261 (48%), Gaps = 8/261 (3%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKT 95
           R  E + +   +  +G K      ++++ AC    ++   + +HA++     +I++ + T
Sbjct: 401 RFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGT 460

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            L+++Y K GC++DA EVF+ + E+ + TW+A+I   + +    + ++ F  M + G+ P
Sbjct: 461 TLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTP 520

Query: 156 DDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           ++  F  +L AC + G  + G +  +S++ +  +    +    ++ +  + G L  A   
Sbjct: 521 NEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEEL 580

Query: 215 FESMDEKDGVA-WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-YNQLG 272
            ESM     V+ W +++    + G+N+   R+  K+   E+      FN+L+ + Y   G
Sbjct: 581 IESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLV--ELHPDHDGFNVLLSNIYASKG 638

Query: 273 QCDVAMEMVKRMESLGI--TP 291
                +E+   M   G+  TP
Sbjct: 639 NWVDVLEVRGMMRQHGVVKTP 659


>gi|125553513|gb|EAY99222.1| hypothetical protein OsI_21180 [Oryza sativa Indica Group]
          Length = 818

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 239/746 (32%), Positives = 388/746 (52%), Gaps = 57/746 (7%)

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE---KDGVAWNSMISGYFQ 235
           +HSL ++ G+S   RV  +++ +  + G+     R      E   KD V WN  ++   +
Sbjct: 74  LHSLAVRTGLSRDPRVTCALVDLLARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAE 133

Query: 236 IGENDEAHRLFDKMCREEI-------------KLG------------------------- 257
             E DEA  +F +M    +             KL                          
Sbjct: 134 AEEWDEAIAVFREMQARGVPRRRGRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAAT 193

Query: 258 ----------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
                     VV +N ++    +LG  D A+E+  RM   G  P+V TW  ++SG +++G
Sbjct: 194 RVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNVATWNTVLSGCSRHG 253

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
           R  +AL +   M   G+ P+  T++S + +  +   L  GMEIH   ++     DV  G 
Sbjct: 254 RDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGT 313

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           +L++MY+KC  L+ A++VFD ++ +++ +WNS++AGY  AG    A EL   M+++ + P
Sbjct: 314 ALVDMYAKCGRLDCAQKVFDALEHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDP 373

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           ++ TWN LI+GY  NG   +AV L +++ K   V  N  SW SLI+G    G+  ++   
Sbjct: 374 DITTWNGLITGYSMNGQSSQAVLLLRQI-KAAGVTPNVVSWTSLISGSCHNGEYEDSFYF 432

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
             +MQ     P+ VT+  +L ACA L    K KE+H   LRR+ +  + V  +LID Y+K
Sbjct: 433 CHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCDMVVSTALIDMYSK 492

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G++V ++ IF+ +  K+++  N+++ G  +HG    A++LF  M + GLKP+  TF ++
Sbjct: 493 GGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWNSGLKPDSITFTAL 552

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           + A    G+V  G + F  +   Y + P  E+Y+ M+DL  R G L+EAM+FIE  PI+P
Sbjct: 553 LTACRSMGLVTEGWEYFDGMETKYGVKPTTENYACMVDLLARCGYLDEAMDFIERSPIDP 612

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
            +S W ALLT C IHGN+ LA +A   LF LEP +     L++ +Y      ++A  ++ 
Sbjct: 613 GASHWGALLTGCSIHGNLALAEVAARNLFRLEPYNSANYLLMMNLYEYERMYDEAESLKY 672

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGG-----WSESYSDLLYSWLQNVPENVTARSSH 782
             +     +  G  WI+++  ++ F   G      +E Y +L+    Q         +S 
Sbjct: 673 AMKARGVDSRPGWSWIQIEQGIHVFEVDGKPHPETAEIYEELIRLVFQIKKAGYVPDTSC 732

Query: 783 SGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMH 842
               ++EEEKE++   H+EKLA+ + LI S  +   +R++KN RMC  CHE AK++S + 
Sbjct: 733 IAYNVQEEEKEKLLLGHTEKLAITYGLIRSDASRAPVRVMKNTRMCNDCHEVAKHISSLC 792

Query: 843 HCEIFLADSKCLHHFKNGQCSCGDYW 868
             +I L D+   HHF +G+CSC DYW
Sbjct: 793 DRQIILRDAVRFHHFVDGKCSCNDYW 818



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 232/483 (48%), Gaps = 28/483 (5%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINL--LQACIDSNSIHLARKLHAFL 83
           + H+  L      +EAI V   +  +G   RR   ++   L+  +D++ +     +  FL
Sbjct: 125 NKHVAMLAEAEEWDEAIAVFREMQARGVPRRRGRAVHAYALKLALDAHPL-----VPGFL 179

Query: 84  N--LVTEIDVFVKTKLLSVY---------------AKCGCLDDAREVFEDMR----ERNL 122
                   DV   T++L                  A+ G +DDA E+   M     E N+
Sbjct: 180 AGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCARLGLVDDALELAARMSRSGPEPNV 239

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            TW+ ++   SR  R RE + +   M++ GL PD      +L++  N G    G  +H  
Sbjct: 240 ATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDATTVSSLLKSVANTGLLRHGMEIHCF 299

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
            ++  +        +++ +Y KCG+L  A++ F++++ ++   WNS+++GY   G  D A
Sbjct: 300 FLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVFDALEHRNLTTWNSLVAGYANAGRFDIA 359

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
             L + M +  +   + T+N LI  Y+  GQ   A+ +++++++ G+TP+V +WT +ISG
Sbjct: 360 LELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAVLLLRQIKAAGVTPNVVSWTSLISG 419

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
              NG    +     EM   GV P+ VT++  + AC  L     G E+H  A++  +  D
Sbjct: 420 SCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRACAGLALQKKGKELHCFALRRAYDCD 479

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           ++V  +LI+MYSK   L +A+ +F+ I+ K++   N+M+ G    G   +A ELF  M  
Sbjct: 480 MVVSTALIDMYSKGGSLVSAKVIFESIQQKNLVLCNAMLTGLAVHGQGREAIELFHDMWN 539

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
           S + P+ IT+  L++     G   E  + F  M     VK  T ++  ++    + G  +
Sbjct: 540 SGLKPDSITFTALLTACRSMGLVTEGWEYFDGMETKYGVKPTTENYACMVDLLARCGYLD 599

Query: 483 NAL 485
            A+
Sbjct: 600 EAM 602



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/463 (23%), Positives = 198/463 (42%), Gaps = 72/463 (15%)

Query: 322 VGVMP-NGVTITSAISACTDLK--------ALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
            GV P +   + S +  C DL         A  +  ++HSLAV+ G + D  V  +L+++
Sbjct: 37  TGVPPYSAGVLVSLLRDCADLHGDDTDHRVARRLAPQLHSLAVRTGLSRDPRVTCALVDL 96

Query: 373 YSKCEELEAAERVFDMIKD---KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP--- 426
            ++     +  R+     +   KD   WN  +A   +A    +A  +F +MQ   VP   
Sbjct: 97  LARLGRGPSCARLLHEAAEDGAKDAVLWNKHVAMLAEAEEWDEAIAVFREMQARGVPRRR 156

Query: 427 ---------------------------------------------PNVITWNVLISGYIQ 441
                                                         +V+ WN +++   +
Sbjct: 157 GRAVHAYALKLALDAHPLVPGFLAGMYAENADVAAATRVLDAMGAGSVVPWNAVVACCAR 216

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G  D+A++L  RM ++   + N A+WN++++G  + G+   ALGV   M      P+  
Sbjct: 217 LGLVDDALELAARMSRSGP-EPNVATWNTVLSGCSRHGRDREALGVVASMLKQGLRPDAT 275

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           T+ S+L + A         EIH   LR  LE  +    +L+D YAK G +  ++ +FD +
Sbjct: 276 TVSSLLKSVANTGLLRHGMEIHCFFLRNQLEPDVYTGTALVDMYAKCGRLDCAQKVFDAL 335

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
             +++ TWNSL+ GY   G +  AL+L + MK   L P+  T+  +I  +S+ G      
Sbjct: 336 EHRNLTTWNSLVAGYANAGRFDIALELVELMKKNRLDPDITTWNGLITGYSMNGQSSQAV 395

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP---IEPDSSIWEALLTA 678
            +   I +   + P +  ++++I     +G+ E++  F  +M    ++P       LL A
Sbjct: 396 LLLRQI-KAAGVTPNVVSWTSLISGSCHNGEYEDSFYFCHEMQKDGVQPSLVTMSVLLRA 454

Query: 679 CR----IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICG 717
           C          +L   A+ R +D    D+++   ++ +Y+  G
Sbjct: 455 CAGLALQKKGKELHCFALRRAYDC---DMVVSTALIDMYSKGG 494


>gi|449464272|ref|XP_004149853.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Cucumis sativus]
 gi|449520209|ref|XP_004167126.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
           chloroplastic-like [Cucumis sativus]
          Length = 840

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 252/780 (32%), Positives = 405/780 (51%), Gaps = 43/780 (5%)

Query: 28  HLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT 87
           H+  LC  G L EA+ ++  +  +   +  + Y  LLQ C+   ++ L +++H  +    
Sbjct: 49  HISSLCKQGHLLEALDLVTDLELEDITIGPDVYGELLQGCVYERALSLGQQIHGRILKNG 108

Query: 88  EI---DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
           E    + +++TKL+  Y+KC   + A  +F  ++ +N ++W+A++G  SR    +E +  
Sbjct: 109 ESIAKNEYIETKLVIFYSKCDESEIANRLFGKLQVQNEFSWAAIMGLKSRMGFNQEALMG 168

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           F  M + GL  D+F+ P   +A G       GK +H+ V+K+G+     V  S+L +Y K
Sbjct: 169 FREMHEYGLLLDNFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGK 228

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--- 261
           CG    A++ F+ + EK+ VAWNSMI  + Q G N EA   F +M  E +    VT    
Sbjct: 229 CGLCEEAKKVFDKILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSF 288

Query: 262 ----------------------------NI----LIRSYNQLGQCDVAMEMVKRMESLGI 289
                                       NI    LI  Y+++G  + A  +   M    +
Sbjct: 289 LSASANLSVIDEGKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEM----L 344

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             D  TW  ++SG+  NG   +ALDL   M    +  + VT+ S ++A  D + L +G E
Sbjct: 345 EKDTVTWNLLVSGYVHNGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKE 404

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
            HS  V+     DV V +S+I+MY+KCE+LE A RVFD    +D+  WN+++A Y + G+
Sbjct: 405 GHSFCVRNNLESDVAVASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAEQGH 464

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
            G+  +LF +MQ   +PPNVI+WN +I G +  G  D+A D F  M ++  +  N  +W 
Sbjct: 465 SGETLKLFYQMQLEGLPPNVISWNSVILGLLNKGKVDQAKDTFMEM-QSLGICPNLITWT 523

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           +LI G  Q G  + A   F+ M+ +   PN ++I S+L AC+ + +    + IH  + R 
Sbjct: 524 TLICGLAQNGLGDEAFLTFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRH 583

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            L  S PV+ SL++ YAK G+I  ++ +FD +  K++  +N++I GY LHG    AL LF
Sbjct: 584 ELSVSTPVLCSLVNMYAKCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAVEALSLF 643

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            ++K   +KP+  TF SI+ A   AG+V  G ++F  +   ++I+   EHY  ++ +  R
Sbjct: 644 RRLKEECIKPDEITFTSILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSR 703

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           S  L+EA+  I  MP EPD+ I+ +LL ACR H + +L     ERL  LEP +      +
Sbjct: 704 SHNLDEALRIILGMPFEPDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVAL 763

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
              YA  G  ++A KVR L +E +     G   I++ N  + F  G  S S +  +Y  L
Sbjct: 764 SNAYAATGMWDEASKVRGLMKERSLSKIPGHSLIQIGNKTHVFFAGDKSHSRTKEIYMML 823


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 255/870 (29%), Positives = 424/870 (48%), Gaps = 94/870 (10%)

Query: 2   FIWILTTFQQLHSLLTKKSNPR--FRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNT 59
           F+  +      H +L+    P     +T L+     G   E +     + TQG  +  +T
Sbjct: 76  FLLSVNNLDCAHQILSYSHEPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDIST 135

Query: 60  YINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           +  L+ AC  +  + L  ++H   L      +  +   L+ +Y+KCG L +  ++FE M 
Sbjct: 136 FHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMT 195

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
            R++ +W+ MI  Y     +RE ++LF  M+  G+ PD+     ++  C    D E GK 
Sbjct: 196 HRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKR 255

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H                    +Y+   KL W R          G   N ++  Y + G+
Sbjct: 256 LH--------------------LYIVDNKL-WIR----------GSLLNCLVDMYSKCGK 284

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
            DEAH L  +   +E ++ VV +  L+  Y +  + D A ++  +M    +     +WT 
Sbjct: 285 MDEAHGLLSRC--DESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLV----SWTT 338

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           M+SG+ Q G   ++L+LF++M F  V+P+ V + + +SAC  L+   +G  +H+  V  G
Sbjct: 339 MMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYG 398

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              D  +GN+L+++Y+KC +L+ A R F+ +  K   SWNS                   
Sbjct: 399 MLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNS------------------- 439

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
                           ++ G+ ++G  D+A D F ++ + D V     SWN+++  Y + 
Sbjct: 440 ----------------MLDGFCRSGGVDKARDFFNKIPEKDIV-----SWNTMVNAYVKH 478

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
              N +  +F KMQSS   P+  T++S+L +CA + A N    ++  + +  +     + 
Sbjct: 479 DLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEIGIDAMLG 538

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
            +LID Y K G +  +  IF  +  K++  W +++  Y + G    A+DL+ +M+  G+K
Sbjct: 539 TALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLEMEERGVK 598

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           P+  TF++++ A S  G+VD G K F  +   Y IIP I HY  M+DL GR G LEE ++
Sbjct: 599 PDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVK 658

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
           FIE MPIEPD SIW +L+ ACR H N++LA  A ++L +++P +     L+  IYA  G+
Sbjct: 659 FIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHVLLSNIYADAGR 718

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA 778
            +D  KVR    E       G   IE   +V+ FV    S   S  +   LQ++   +  
Sbjct: 719 WDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVA---SNLVSADILCMLQDIERRLLV 775

Query: 779 RSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
           +          +E  + +  HSE+LA+AF LI ++Q    IR+V ++RMC  CH   K +
Sbjct: 776 K----------QELSDTTSQHSERLAVAFGLI-NNQENSPIRVVNSVRMCRDCHSVMKLI 824

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S  +  EI + D+   H F +G CSC DYW
Sbjct: 825 SQAYDREIVIRDNYRFHRFTDGHCSCKDYW 854


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 253/880 (28%), Positives = 435/880 (49%), Gaps = 70/880 (7%)

Query: 53  AKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAR 111
           +K +   Y ++L+ C    S+ +A+ +H  +   V   D  +   L++VYAKC     AR
Sbjct: 108 SKKKLKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYAR 167

Query: 112 EVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG 171
            V   M +R++ +W+A+I     +    + + LF  M  +G+ P++F     L+AC  C 
Sbjct: 168 LVLAKMPDRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCM 227

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
             + GK MH+   KLG+     V ++++ +Y KCG++  A + F  M E++ V WN +++
Sbjct: 228 ALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLN 287

Query: 232 GYFQIGENDEAHRLF------DKMCRE--------------EIKLGVVTFNILIRS---- 267
           GY Q G+     +LF      D  C E               +K G V  +++I+     
Sbjct: 288 GYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEG 347

Query: 268 --------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
                    +   +C +A++ +   +++   PD+  W+ +I+   Q G++ +++ LF  M
Sbjct: 348 NEFIGCGLVDMYSKCGLAIDAIGVFKTIK-KPDIVVWSALITCLDQQGQSEESIKLFHLM 406

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
                +PN  TI S +SA T+   L  G  IH+   K GF  DV V N+L+ MY K   +
Sbjct: 407 RLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCV 466

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG- 438
               ++++ + D+D+ SWN+ ++G    G   +   +F  M E    PN+ T+  ++   
Sbjct: 467 HDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSC 526

Query: 439 ---------------YIQNGNEDEA------VDLFQR--------MGKNDKVKRNTASWN 469
                           I+N  +D        +D++ +        +  N    R+  +W 
Sbjct: 527 SCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWT 586

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
            +I  Y Q  Q   AL  FR+MQ     PN  T+   L  C+ L +    +++H  V + 
Sbjct: 587 VIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKS 646

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
              S + V ++L+D YAK G +  +  +F+ +  +D I WN++ICGY  +G  + AL  F
Sbjct: 647 GHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAF 706

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
             M   G+ P+  TF  I+ A S  G+V+ GK+ F S+   + I P ++H + M+D+ GR
Sbjct: 707 RMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGR 766

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
            GK +E  +FI+ M +  ++ IWE +L A ++H N+ L   A  +LF+L+P +     L+
Sbjct: 767 VGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILL 826

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             I+A  G+ +D  +VR L      +   G  W+E    V+TFV+  +S      ++  L
Sbjct: 827 SNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKL 886

Query: 770 QNVPENVTA-----RSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
             +   + +     ++ +    + E EK+E    HSE+LAL FALI +S +   IRI KN
Sbjct: 887 DELDRELASIQYVPKTEYVLHNVGETEKKENLRFHSERLALGFALISTS-SEKKIRIFKN 945

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
           +R+C  CH+  K++S + + EI + D +  HHFKNG CSC
Sbjct: 946 LRICRDCHDVMKHISSITNQEIVVRDVRRFHHFKNGACSC 985



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 146/289 (50%), Gaps = 4/289 (1%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VFV 93
           G  +  +T+   +  +G      T+I++L +C     +H  R++HA + +  ++D   FV
Sbjct: 495 GMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHI-IKNQLDDNNFV 553

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +YAKC  L+DA   F  +  R+L+TW+ +I  Y++  +  + +  F  M Q+G+
Sbjct: 554 CTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGV 613

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P++F     L  C +    E G+ +HS+V K G      V ++++ +Y KCG +  A  
Sbjct: 614 KPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEA 673

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            FE++  +D +AWN++I GY Q G+ ++A   F  M  E I    VTF  ++ + +  G 
Sbjct: 674 LFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGL 733

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
            +   E    M    GI+P V    CM+    + G+  +  D  ++M  
Sbjct: 734 VEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQL 782


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 259/791 (32%), Positives = 403/791 (50%), Gaps = 76/791 (9%)

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           V + D+    K +S + + G  D A  VF  M  R+  +++AMI  Y R+ ++     LF
Sbjct: 44  VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF 103

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M +  LF                                         N +L  YV+ 
Sbjct: 104 DQMPERDLFS---------------------------------------WNVMLTGYVRN 124

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            +L  ARR F+ M EKD V+WNS++SGY Q G  DEA  +FD M  +      +++N L+
Sbjct: 125 CRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKN----SISWNGLL 180

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
            +Y   G+ + A  + +         D+ +W C++ GF +  +   A  LF +M      
Sbjct: 181 AAYVHNGRIEEACLLFESKSDW----DLISWNCLMGGFVRKKKLGDARWLFDKMP----- 231

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKM---GFTDDVLVGNSLINMYSKCEELEAA 382
                +  AIS  T +   A G  + S A ++     T DV    ++++ Y +   L+ A
Sbjct: 232 -----VRDAISWNTMISGYAQGGGL-SQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEA 285

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
           +  FD + +K+  S+N+MIAGY Q      A ELF    ES    N+ +WN +I+GY Q 
Sbjct: 286 KTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELF----ESMPCRNISSWNTMITGYGQI 341

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G+  +A   F  M + D V     SW ++IAGY Q G    AL +F +++      N  T
Sbjct: 342 GDIAQARKFFDMMPQRDCV-----SWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRAT 396

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
               L  CA + A    K+IHG  ++    +   V N+L+  Y K G+I  +   F+G+ 
Sbjct: 397 FGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIE 456

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            KD+++WN+++ GY  HGF   AL +F+ MK+ G+KP+  T + ++ A S  G++D G +
Sbjct: 457 EKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTE 516

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F S+T+ Y +IP  +HY+ MIDL GR+G+LEEA + I +MP +P ++ W ALL A RIH
Sbjct: 517 YFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIH 576

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
           GN +L   A E +F +EP +  +  L+  +YA  G+  DA K+R   R+   +   G  W
Sbjct: 577 GNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSW 636

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISG 797
           +EV+N ++TF  G  S    + +Y++L+ +      E   + +      +EEEEKE +  
Sbjct: 637 VEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLK 696

Query: 798 IHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF 857
            HSEKLA+AF ++ +      IR++KN+R+C  CH   K++S +    I L DS   HHF
Sbjct: 697 YHSEKLAVAFGIL-TIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHF 755

Query: 858 KNGQCSCGDYW 868
             G CSCGDYW
Sbjct: 756 NEGFCSCGDYW 766



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 227/521 (43%), Gaps = 97/521 (18%)

Query: 74  HLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYS 133
           H    LH F N +          ++S Y +    + AR +F+ M ER+L++W+ M+  Y 
Sbjct: 64  HCDSALHVF-NTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYV 122

Query: 134 RDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR 193
           R+ R  +   LF LM +  +   + L     Q   N    EA ++  ++  K  +S    
Sbjct: 123 RNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQ---NGYVDEAREVFDNMPEKNSISW--- 176

Query: 194 VRNSVLAVYVKCGK----------------LIW---------------ARRFFESMDEKD 222
             N +LA YV  G+                + W               AR  F+ M  +D
Sbjct: 177 --NGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRD 234

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDK-----------MCREEIKLGV------------- 258
            ++WN+MISGY Q G   +A RLFD+           M    ++ G+             
Sbjct: 235 AISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE 294

Query: 259 ---VTFNILIRSYNQLGQCDVAMEMVKRMESLGITP------------------------ 291
              V++N +I  Y Q  + D+A E+ + M    I+                         
Sbjct: 295 KNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMM 354

Query: 292 ---DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
              D  +W  +I+G+AQ+G   +AL++F E+   G   N  T   A+S C D+ AL +G 
Sbjct: 355 PQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGK 414

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           +IH  AVKMG+     VGN+L+ MY KC  ++ A   F+ I++KDV SWN+M+AGY + G
Sbjct: 415 QIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHG 474

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           +  +A  +F  M+ + V P+ IT   ++S     G  D   + F  M K+  V   +  +
Sbjct: 475 FGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHY 534

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
             +I    + G+   A  + R M    F P   +  ++L A
Sbjct: 535 TCMIDLLGRAGRLEEAQDLIRNMP---FQPGAASWGALLGA 572



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 173/369 (46%), Gaps = 17/369 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           NG L+EA T  D +  +       +Y  ++   + +  + +AR+L  F ++    ++   
Sbjct: 279 NGMLDEAKTFFDEMPEKNEV----SYNAMIAGYVQTKKMDIAREL--FESMPCR-NISSW 331

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             +++ Y + G +  AR+ F+ M +R+  +W+A+I  Y++   + E + +F  + QDG  
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGES 391

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            +   F   L  C +    E GK +H   +K+G      V N++LA+Y KCG +  A   
Sbjct: 392 LNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDT 451

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           FE ++EKD V+WN+M++GY + G   +A  +F+ M    +K   +T   ++ + +  G  
Sbjct: 452 FEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLL 511

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
           D   E    M +  G+ P    +TCMI    + GR  +A DL + M F    P   +  +
Sbjct: 512 DRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPF---QPGAASWGA 568

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            + A        +G +   +  KM   +  +    L N+Y+       A+++   ++D  
Sbjct: 569 LLGASRIHGNTELGEKAAEMVFKMEPQNSGMY-VLLSNLYAASGRWVDADKMRSKMRDIG 627

Query: 394 V-----YSW 397
           V     YSW
Sbjct: 628 VQKVPGYSW 636



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 109/265 (41%), Gaps = 54/265 (20%)

Query: 604 FLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
           FL +++     G++D G + F  + E Y + P  +HY+ MIDL GR  +LEE        
Sbjct: 770 FLLVVI---YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG------- 819

Query: 664 PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDAL 723
                     ALL A RIHGN +L   A +  F + P +  I ++              +
Sbjct: 820 ----------ALLGASRIHGNTELGEKAAQMFFKMGPQNSGISKM------------RDV 857

Query: 724 KVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHS 783
            V+K+          G  W EV+N ++TF  G +     + +  +L+ +   +  R    
Sbjct: 858 GVQKVP---------GYSWFEVQNKIHTFSVGLFLSRERENI-GFLEELDLKMREREEEK 907

Query: 784 GLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHH 843
              ++           SE LA A  ++          + K + +C  C    K++S +  
Sbjct: 908 ERTLK---------YLSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVG 958

Query: 844 CEIFLADSKCLHHFKNGQCSCGDYW 868
             I L DS   H F    CSCG+YW
Sbjct: 959 RLITLRDS---HRFNESICSCGEYW 980


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  401 bits (1030), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 259/791 (32%), Positives = 403/791 (50%), Gaps = 76/791 (9%)

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           V + D+    K +S + + G  D A  VF  M  R+  +++AMI  Y R+ ++     LF
Sbjct: 44  VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLF 103

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M +  LF                                         N +L  YV+ 
Sbjct: 104 DQMPERDLFS---------------------------------------WNVMLTGYVRN 124

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            +L  ARR F+ M EKD V+WNS++SGY Q G  DEA  +FD M  +      +++N L+
Sbjct: 125 CRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKN----SISWNGLL 180

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
            +Y   G+ + A  + +         D+ +W C++ GF +  +   A  LF +M      
Sbjct: 181 AAYVHNGRIEEACLLFESKSDW----DLISWNCLMGGFVRKKKLGDARWLFDKMP----- 231

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKM---GFTDDVLVGNSLINMYSKCEELEAA 382
                +  AIS  T +   A G  + S A ++     T DV    ++++ Y +   L+ A
Sbjct: 232 -----VRDAISWNTMISGYAQGGGL-SQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEA 285

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
           +  FD + +K+  S+N+MIAGY Q      A ELF    ES    N+ +WN +I+GY Q 
Sbjct: 286 KTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELF----ESMPCRNISSWNTMITGYGQI 341

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G+  +A   F  M + D V     SW ++IAGY Q G    AL +F +++      N  T
Sbjct: 342 GDIAQARKFFDMMPQRDCV-----SWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRAT 396

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
               L  CA + A    K+IHG  ++    +   V N+L+  Y K G+I  +   F+G+ 
Sbjct: 397 FGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIE 456

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            KD+++WN+++ GY  HGF   AL +F+ MK+ G+KP+  T + ++ A S  G++D G +
Sbjct: 457 EKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTE 516

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F S+T+ Y +IP  +HY+ MIDL GR+G+LEEA + I +MP +P ++ W ALL A RIH
Sbjct: 517 YFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIH 576

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
           GN +L   A E +F +EP +  +  L+  +YA  G+  DA K+R   R+   +   G  W
Sbjct: 577 GNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSW 636

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISG 797
           +EV+N ++TF  G  S    + +Y++L+ +      E   + +      +EEEEKE +  
Sbjct: 637 VEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLK 696

Query: 798 IHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF 857
            HSEKLA+AF ++ +      IR++KN+R+C  CH   K++S +    I L DS   HHF
Sbjct: 697 YHSEKLAVAFGIL-TIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHF 755

Query: 858 KNGQCSCGDYW 868
             G CSCGDYW
Sbjct: 756 NEGFCSCGDYW 766



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/521 (27%), Positives = 227/521 (43%), Gaps = 97/521 (18%)

Query: 74  HLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYS 133
           H    LH F N +          ++S Y +    + AR +F+ M ER+L++W+ M+  Y 
Sbjct: 64  HCDSALHVF-NTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYV 122

Query: 134 RDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR 193
           R+ R  +   LF LM +  +   + L     Q   N    EA ++  ++  K  +S    
Sbjct: 123 RNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQ---NGYVDEAREVFDNMPEKNSISW--- 176

Query: 194 VRNSVLAVYVKCGK----------------LIW---------------ARRFFESMDEKD 222
             N +LA YV  G+                + W               AR  F+ M  +D
Sbjct: 177 --NGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRD 234

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDK-----------MCREEIKLGV------------- 258
            ++WN+MISGY Q G   +A RLFD+           M    ++ G+             
Sbjct: 235 AISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPE 294

Query: 259 ---VTFNILIRSYNQLGQCDVAMEMVKRMESLGITP------------------------ 291
              V++N +I  Y Q  + D+A E+ + M    I+                         
Sbjct: 295 KNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDMM 354

Query: 292 ---DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
              D  +W  +I+G+AQ+G   +AL++F E+   G   N  T   A+S C D+ AL +G 
Sbjct: 355 PQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGK 414

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           +IH  AVKMG+     VGN+L+ MY KC  ++ A   F+ I++KDV SWN+M+AGY + G
Sbjct: 415 QIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHG 474

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           +  +A  +F  M+ + V P+ IT   ++S     G  D   + F  M K+  V   +  +
Sbjct: 475 FGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHY 534

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
             +I    + G+   A  + R M    F P   +  ++L A
Sbjct: 535 TCMIDLLGRAGRLEEAQDLIRNMP---FQPGAASWGALLGA 572



 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 173/369 (46%), Gaps = 17/369 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           NG L+EA T  D +  +       +Y  ++   + +  + +AR+L  F ++    ++   
Sbjct: 279 NGMLDEAKTFFDEMPEKNEV----SYNAMIAGYVQTKKMDIAREL--FESMPCR-NISSW 331

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             +++ Y + G +  AR+ F+ M +R+  +W+A+I  Y++   + E + +F  + QDG  
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGES 391

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            +   F   L  C +    E GK +H   +K+G      V N++LA+Y KCG +  A   
Sbjct: 392 LNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDT 451

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           FE ++EKD V+WN+M++GY + G   +A  +F+ M    +K   +T   ++ + +  G  
Sbjct: 452 FEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLL 511

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
           D   E    M +  G+ P    +TCMI    + GR  +A DL + M F    P   +  +
Sbjct: 512 DRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPF---QPGAASWGA 568

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            + A        +G +   +  KM   +  +    L N+Y+       A+++   ++D  
Sbjct: 569 LLGASRIHGNTELGEKAAEMVFKMEPQNSGMY-VLLSNLYAASGRWVDADKMRSKMRDIG 627

Query: 394 V-----YSW 397
           V     YSW
Sbjct: 628 VQKVPGYSW 636


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 260/790 (32%), Positives = 408/790 (51%), Gaps = 80/790 (10%)

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+  D F FP +L+ACG   D   G  +H L+IK G   +  V NS++++Y KC  ++ A
Sbjct: 5   GVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGA 64

Query: 212 RRFFESMDEK-DGVAWNSMISGYFQIGENDEAHRLFDKMCREEI---------------- 254
           R+ F+ M+E+ D V+WNS+IS Y   G+  EA  LF +M +  +                
Sbjct: 65  RKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACED 124

Query: 255 ----KLGVVTFNILIRSYNQLGQCDVAMEMVK---RMESLGITPDVF---------TWTC 298
               KLG+     +++S NQ+    VA  +V    R   +     +F         TW  
Sbjct: 125 SSFKKLGMEIHAAILKS-NQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNS 183

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           MI+GF QNG  ++AL  F  +    + P+ V++ S ++A   L  L  G EIH+ A+K  
Sbjct: 184 MIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNW 243

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              ++ +GN+LI+MYSKC  +  A  VFD + +KD+ SW ++IA Y Q     +A +L  
Sbjct: 244 LDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLR 303

Query: 419 KMQESDVP----------------------------------PNVITWNVLISGYIQNGN 444
           K+Q   +                                    +++  N++I  Y   GN
Sbjct: 304 KVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDLMMQNMIIDVYADCGN 363

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            + A  +F+ +   D V     SW S+I+ Y   G  N ALGVF  M+ +   P+ +T++
Sbjct: 364 INYATRMFESIKCKDVV-----SWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLV 418

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           S+L A A L A NK KEIHG + R+        +NSL+D YA  G++  +  +F    SK
Sbjct: 419 SILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSK 478

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
            ++ W ++I  Y +HG   AA++LF  M+   L P+  TFL+++ A S +G+++ GK++ 
Sbjct: 479 SLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLL 538

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
            ++   YQ+ P  EHY+ ++DL GR+  LEEA  F++ M IEP + +W A L ACRIH N
Sbjct: 539 ETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSN 598

Query: 685 IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIE 744
             L  +A ++L DL+P       LI  ++A  G+ +D  +VR   +    + + G  WIE
Sbjct: 599 KKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIE 658

Query: 745 VKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------IEEEEKEEISGI 798
           V N V+TF+    S   S  +Y  L  + E +     +          + +EEK ++   
Sbjct: 659 VGNKVHTFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYG 718

Query: 799 HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
           HSE+LA+A+ L+ +S+    IRI KN+R+CV CH   K VS     E+ + D+   HHF+
Sbjct: 719 HSERLAIAYGLMSTSEGT-PIRITKNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFE 777

Query: 859 NGQCSCGDYW 868
           +G CSCGD+W
Sbjct: 778 DGVCSCGDFW 787



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 140/527 (26%), Positives = 257/527 (48%), Gaps = 64/527 (12%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  +L+AC     IH   ++H  +     +  VFV   L+S+YAKC  +  AR++F+ M
Sbjct: 12  TFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRM 71

Query: 118 RERN-LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
            ERN + +W+++I AYS + +  E + LF  M + G+  + +     LQAC +    + G
Sbjct: 72  NERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLG 131

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
             +H+ ++K        V N+++A++V+ GK+ +A R F+ +DEKD + WNSMI+G+ Q 
Sbjct: 132 MEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQN 191

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC---------------------- 274
           G  +EA + F  +    +K   V+   ++ +  +LG                        
Sbjct: 192 GLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIG 251

Query: 275 DVAMEMVKRMESLG---------ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
           +  ++M  +   +          I  D+ +WT +I+ +AQN   ++AL L +++   G+ 
Sbjct: 252 NTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMD 311

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
            + + I S + AC+ L+ L+   E+H   +K G + D+++ N +I++Y+ C  +  A R+
Sbjct: 312 VDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNINYATRM 370

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL---------- 435
           F+ IK KDV SW SMI+ Y   G   +A  +F  M+E+ V P+ IT   +          
Sbjct: 371 FESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSAL 430

Query: 436 -----ISGYI-------QNGNEDEAVDLFQRMGKNDKV--------KRNTASWNSLIAGY 475
                I G+I       +    +  VD++   G  +           ++   W ++I  Y
Sbjct: 431 NKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAY 490

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
              G+   A+ +F  M+     P+ +T L++L AC++    N+ K +
Sbjct: 491 GMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRL 537



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 139/520 (26%), Positives = 236/520 (45%), Gaps = 46/520 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG+  EA+ +   +   G      T +  LQAC DS+   L  ++HA  L     +DV+V
Sbjct: 90  NGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYV 149

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L++++ + G +  A  +F+++ E++  TW++MI  ++++  + E ++ F  +    L
Sbjct: 150 ANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANL 209

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD+     IL A G  G    GK +H+  +K  +    R+ N+++ +Y KC  + +A  
Sbjct: 210 KPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGL 269

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------ 261
            F+ M  KD ++W ++I+ Y Q   + EA +L  K+  + + +  +              
Sbjct: 270 VFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRC 329

Query: 262 ----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                                 N++I  Y   G  + A  M + ++      DV +WT M
Sbjct: 330 LSHAKEVHGYTLKRGLSDLMMQNMIIDVYADCGNINYATRMFESIK----CKDVVSWTSM 385

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           IS +  NG  ++AL +F  M    V P+ +T+ S +SA   L AL  G EIH    + GF
Sbjct: 386 ISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGF 445

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             +    NSL++MY+ C  LE A +VF   + K +  W +MI  Y   G    A ELF  
Sbjct: 446 MLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSI 505

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY-QQL 478
           M++  + P+ IT+  L+     +G  +E   L + M    K K     W    A     L
Sbjct: 506 MEDQKLIPDHITFLALLYACSHSGLINEGKRLLETM----KCKYQLEPWPEHYACLVDLL 561

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
           G+ N+    +  ++S    P      + L AC   + SNK
Sbjct: 562 GRANHLEEAYHFVKSMQIEPTAEVWCAFLGACR--IHSNK 599



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 204/426 (47%), Gaps = 48/426 (11%)

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M  +GV  +  T    + AC  ++ +  G EIH L +K G+   V V NSL++MY+KC +
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 379 LEAAERVFDMIKDK-DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW----- 432
           +  A ++FD + ++ DV SWNS+I+ Y   G C +A  LF +MQ++ V  N  T      
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 433 ------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                         N L++ +++ G    A  +F  + + D + 
Sbjct: 121 ACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNI- 179

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
               +WNS+IAG+ Q G  N AL  F  +Q +   P+ V+++S+L A   L      KEI
Sbjct: 180 ----TWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEI 235

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           H   ++  L+S+L + N+LID Y+K   + Y+  +FD M +KD+I+W ++I  Y  +   
Sbjct: 236 HAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCH 295

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
             AL L  ++++ G+  +     S +LA S    +   K+V     +  + +  +   + 
Sbjct: 296 TEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLK--RGLSDLMMQNM 353

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH---GNIDLAVLAIERLFDLE 699
           +ID+Y   G +  A    E +  + D   W ++++ C +H    N  L V  + +   +E
Sbjct: 354 IIDVYADCGNINYATRMFESIKCK-DVVSWTSMIS-CYVHNGLANEALGVFYLMKETSVE 411

Query: 700 PGDVLI 705
           P  + +
Sbjct: 412 PDSITL 417


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 247/796 (31%), Positives = 399/796 (50%), Gaps = 117/796 (14%)

Query: 114 FEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF 173
           F++++      W+ ++   ++   +   + LF  M+  G+  D + F  + ++  +    
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 174 EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
             G+ +H  ++K G      V NS++A Y+K  ++                         
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRV------------------------- 95

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
                 D A ++FD                               EM +R        DV
Sbjct: 96  ------DSARKVFD-------------------------------EMTER--------DV 110

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            +W  +I+G+  NG   + L +F +M   G+  +  TI S  + C D + +++G  +HS+
Sbjct: 111 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 170

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            VK  F+ +    N+L++MYSKC +L++A+ VF  + D+ V S+ SMIAGY + G  G+A
Sbjct: 171 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 230

Query: 414 YELFIKMQESDVPPNVIT----------------------W-------------NVLISG 438
            +LF +M+E  + P+V T                      W             N L+  
Sbjct: 231 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 290

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM-QSSCFY 497
           Y + G+  EA  +F  M   D +     SWN++I GY +    N AL +F  + +   F 
Sbjct: 291 YAKCGSMQEAELVFSEMRVKDII-----SWNTIIGGYSKNCYANEALSLFNLLLEEKRFS 345

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P+  T+  VLPACA L A +K +EIHG ++R    S   V NSL+D YAK G ++ +  +
Sbjct: 346 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHML 405

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           FD ++SKD+++W  +I GY +HGF   A+ LF+QM+  G++ +  +F+S++ A S +G+V
Sbjct: 406 FDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLV 465

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
           D G + F  +    +I P +EHY+ ++D+  R+G L +A  FIE+MPI PD++IW ALL 
Sbjct: 466 DEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLC 525

Query: 678 ACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNS 737
            CRIH ++ LA    E++F+LEP +     L+  IYA   K E   ++RK   +   R +
Sbjct: 526 GCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKN 585

Query: 738 FGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEK 792
            G  WIE+K  V  FV G  S   ++ + ++L+ V      E  +  + ++ +  EE EK
Sbjct: 586 PGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEK 645

Query: 793 EEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
           EE    HSEKLA+A  +I S      IR+ KN+R+C  CHE AK++S +   EI L DS 
Sbjct: 646 EEALCGHSEKLAMALGIISSGHGK-IIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSN 704

Query: 853 CLHHFKNGQCSCGDYW 868
             H FK+G CSC  +W
Sbjct: 705 RFHQFKDGHCSCRGFW 720



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 245/524 (46%), Gaps = 44/524 (8%)

Query: 24  FRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL 83
           F +  ++ L  +G  + +I +   + + G ++   T+  + ++     S+H   +LH F+
Sbjct: 11  FWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFI 70

Query: 84  --NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
             +   E +  V   L++ Y K   +D AR+VF++M ER++ +W+++I  Y  +    + 
Sbjct: 71  LKSGFGERNS-VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 129

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
           + +F  M+  G+  D      +   C +      G+ +HS+ +K   S   R  N++L +
Sbjct: 130 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 189

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           Y KCG L  A+  F  M ++  V++ SMI+GY + G   EA +LF++M  E I   V T 
Sbjct: 190 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 249

Query: 262 NILI-------------RSYNQLGQCDVA---------MEMVKRMESLG---------IT 290
             ++             R +  + + D+          M+M  +  S+            
Sbjct: 250 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 309

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLF----KEMSFVGVMPNGVTITSAISACTDLKALAM 346
            D+ +W  +I G+++N   ++AL LF    +E  F    P+  T+   + AC  L A   
Sbjct: 310 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRF---SPDERTVACVLPACASLSAFDK 366

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G EIH   ++ G+  D  V NSL++MY+KC  L  A  +FD I  KD+ SW  MIAGY  
Sbjct: 367 GREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGM 426

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
            G+  +A  LF +M+++ +  + I++  L+     +G  DE    F  M    K++    
Sbjct: 427 HGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVE 486

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            +  ++     L +  + +  +R +++    P+     ++L  C
Sbjct: 487 HYACIV---DMLARTGDLIKAYRFIENMPIPPDATIWGALLCGC 527


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 238/672 (35%), Positives = 370/672 (55%), Gaps = 33/672 (4%)

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CREEIKLGVVTF 261
           V+   L  AR  F+ M E+D V+WN+M+SGY Q G   EA  +FD+M C+  I     ++
Sbjct: 41  VRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSI-----SW 95

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N ++ +Y Q G+    +E  +R+       ++ +W CM+ G+ +  R   A  +F  M  
Sbjct: 96  NGMLAAYVQNGR----IEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMP- 150

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
                + V+  + IS       L   +E   L  +     DV    ++++ Y +   L+ 
Sbjct: 151 ---ERDEVSWNTMISGYAQNGEL---LEAQRL-FEESPVRDVFTWTAMVSGYVQNGMLDE 203

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
           A RVFD + +K+  SWN++IAGY Q     +A ELF    E+    NV +WN +I+GY Q
Sbjct: 204 ARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELF----EAMPCQNVSSWNTMITGYAQ 259

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
           NG+  +A + F RM + D +     SW ++IAGY Q G    AL +F +M+      N  
Sbjct: 260 NGDIAQARNFFDRMPQRDSI-----SWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRS 314

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           T  S L  CA + A    K++HG V++  LES   V N+L+  Y K GNI  +  +F+G+
Sbjct: 315 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 374

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
             K++++WN++I GY  HGF   AL LF+ MK  G+ P+  T + ++ A S  G+VD G 
Sbjct: 375 EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGT 434

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
           + F S+T+ Y I    +HY+ MIDL GR+G+L++A   +++MP EPD++ W ALL A RI
Sbjct: 435 EYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRI 494

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           HGN +L   A + +F++EP +  +  L+  +YA  G+  D  ++R   R+   +   G  
Sbjct: 495 HGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYS 554

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS--SHSGLC---IEEEEKEEIS 796
           W+EV+N ++TF  G       D +Y++L+ +   +      S + L    +EEEEK  + 
Sbjct: 555 WVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHML 614

Query: 797 GIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHH 856
             HSEKLA+AF ++ +  A   IR++KN+R+C  CH   K++S +    I L DS   HH
Sbjct: 615 KYHSEKLAVAFGIL-AIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHH 673

Query: 857 FKNGQCSCGDYW 868
           F  GQCSCGDYW
Sbjct: 674 FNGGQCSCGDYW 685



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/477 (29%), Positives = 236/477 (49%), Gaps = 53/477 (11%)

Query: 64  LQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLY 123
           L+ C+   ++  AR L    + + E DV     +LS YA+ G + +A+E+F++M  +N  
Sbjct: 37  LRGCVRYRNLRAARLL---FDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSI 93

Query: 124 TWSAMIGAYSRDQRWREVVELF----------------------FLMVQDGLFP-----D 156
           +W+ M+ AY ++ R  +   LF                       L+   G+F      D
Sbjct: 94  SWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERD 153

Query: 157 DFLFPKILQACGNCGD-FEAGKLMHSLVIKLGMSCVRRV--RNSVLAVYVKCGKLIWARR 213
           +  +  ++      G+  EA +L          S VR V    ++++ YV+ G L  ARR
Sbjct: 154 EVSWNTMISGYAQNGELLEAQRLFEE-------SPVRDVFTWTAMVSGYVQNGMLDEARR 206

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CREEIKLGVVTFNILIRSYNQLG 272
            F+ M EK+ V+WN++I+GY Q    D+A  LF+ M C+      V ++N +I  Y Q G
Sbjct: 207 VFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQN-----VSSWNTMITGYAQNG 261

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
               A     RM       D  +W  +I+G+AQ+G   +AL LF EM   G   N  T T
Sbjct: 262 DIAQARNFFDRMPQR----DSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFT 317

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           S +S C ++ AL +G ++H   VK G      VGN+L+ MY KC  ++ A  VF+ I++K
Sbjct: 318 STLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEK 377

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLF 452
           +V SWN+MIAGY + G+  +A  LF  M+++ + P+ +T   ++S     G  D+  + F
Sbjct: 378 EVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYF 437

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
             M ++  +  N+  +  +I    + G+ ++A  + + M    F P+  T  ++L A
Sbjct: 438 YSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMP---FEPDAATWGALLGA 491



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 131/512 (25%), Positives = 224/512 (43%), Gaps = 99/512 (19%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           L  AR +F+ M ER++ +W+AM+  Y+++   +E  E+F  M                  
Sbjct: 46  LRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM-----------------P 88

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C N   +                      N +LA YV+ G++  ARR FES  + + ++W
Sbjct: 89  CKNSISW----------------------NGMLAAYVQNGRIEDARRLFESKADWELISW 126

Query: 227 NSMISGYFQIGENDEAHRLFDKMC-REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME 285
           N M+ GY +     +A  +FD+M  R+E     V++N +I  Y Q G+   A    +R+ 
Sbjct: 127 NCMMGGYVKRNRLVDARGIFDRMPERDE-----VSWNTMISGYAQNGELLEA----QRLF 177

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
                 DVFTWT M+SG+ QNG   +A  +F  M       N V+  + I+     K + 
Sbjct: 178 EESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP----EKNSVSWNAIIAGYVQCKRMD 233

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
              E+           +V   N++I  Y++  ++  A   FD +  +D  SW ++IAGY 
Sbjct: 234 QARELFEAMP----CQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYA 289

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITW--------------------------------- 432
           Q+GY  +A  LF++M+      N  T+                                 
Sbjct: 290 QSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCY 349

Query: 433 --NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
             N L+  Y + GN D+A  +F+ + + + V     SWN++IAGY + G    AL +F  
Sbjct: 350 VGNALLVMYCKCGNIDDAYIVFEGIEEKEVV-----SWNTMIAGYARHGFGKEALMLFES 404

Query: 491 MQSSCFYPNCVTILSVLPACAYLVASNKVKE-IHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           M+ +   P+ VT++ VL AC++    +K  E  +       + ++      +ID   ++G
Sbjct: 405 MKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAG 464

Query: 550 NIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
            +  ++ +   M    D  TW +L+    +HG
Sbjct: 465 RLDDAQNLMKNMPFEPDAATWGALLGASRIHG 496



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 170/372 (45%), Gaps = 23/372 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           NG L+EA  V D +  + +     ++  ++   +    +  AR+L   +      +V   
Sbjct: 198 NGMLDEARRVFDGMPEKNSV----SWNAIIAGYVQCKRMDQARELFEAMPCQ---NVSSW 250

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             +++ YA+ G +  AR  F+ M +R+  +W+A+I  Y++     E + LF  M +DG  
Sbjct: 251 NTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGER 310

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            +   F   L  C      E GK +H  V+K G+     V N++L +Y KCG +  A   
Sbjct: 311 LNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 370

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           FE ++EK+ V+WN+MI+GY + G   EA  LF+ M +  I    VT   ++ + +  G  
Sbjct: 371 FEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLV 430

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
           D   E    M +  GIT +   +TCMI    + GR   A +L K M F    P+  T  +
Sbjct: 431 DKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPF---EPDAATWGA 487

Query: 334 AISACTDLKALAMGMEIHSLAVKMGF---TDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
            + A      +    E+   A KM F    D+  +   L N+Y+         R+   ++
Sbjct: 488 LLGASR----IHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMR 543

Query: 391 DKDV-----YSW 397
           D+ V     YSW
Sbjct: 544 DRGVKKVPGYSW 555



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 180/417 (43%), Gaps = 83/417 (19%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DVF  T ++S Y + G LD+AR VF+ M E+N  +W+A+I  Y + +R  +  ELF  M 
Sbjct: 184 DVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAM- 242

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
                            C N   +                      N+++  Y + G + 
Sbjct: 243 ----------------PCQNVSSW----------------------NTMITGYAQNGDIA 264

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            AR FF+ M ++D ++W ++I+GY Q G  +EA  LF +M R+  +L   TF   + +  
Sbjct: 265 QARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCA 324

Query: 270 QLGQCDVAMEMVKRMESLGI-------------------------------TPDVFTWTC 298
           ++   ++  ++  R+   G+                                 +V +W  
Sbjct: 325 EIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNT 384

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKM 357
           MI+G+A++G   +AL LF+ M   G++P+ VT+   +SAC+    +  G E  +S+    
Sbjct: 385 MIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDY 444

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWNSM-----IAGYCQAGYCG 411
           G T +      +I++  +   L+ A+ +  +M  + D  +W ++     I G  + G   
Sbjct: 445 GITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGE-- 502

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           KA ++  +M+    P N   + +L + Y  +G   +   +  RM      K    SW
Sbjct: 503 KAAKMIFEME----PDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSW 555


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 267/897 (29%), Positives = 428/897 (47%), Gaps = 164/897 (18%)

Query: 61  INLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM--R 118
           I+LL+ C    +  LA +   F++  TE+  +     +  Y +CG   +A  + + +   
Sbjct: 34  ISLLRQCKTLINAKLAHQ-QIFVHGFTEMFSYA----VGAYIECGASAEAVSLLQRLIPS 88

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
              ++ W+A+I    +     + +  +  M + G  PD + FP +L+ACG       G  
Sbjct: 89  HSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGAS 148

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H++V   G+     + NS++A+Y +CG L                              
Sbjct: 149 VHAIVCANGLGSNVFICNSIVAMYGRCGAL------------------------------ 178

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
            D+AH++FD++   +I+                                    D+ +W  
Sbjct: 179 -DDAHQMFDEVLERKIE------------------------------------DIVSWNS 201

Query: 299 MISGFAQNGRTSQALDLFKEMS---FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           +++ + Q G++  AL +   M     + + P+ +T+ + + AC  + AL  G ++H  +V
Sbjct: 202 ILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSV 261

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           + G  DDV VGN+L++MY+KC ++  A +VF+ IK KDV SWN+M+ GY Q G    A  
Sbjct: 262 RNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALS 321

Query: 416 LFIKMQESDVP-----------------------------------PNVITWNVLISG-- 438
           LF  MQE D+                                    PNV+T   L+SG  
Sbjct: 322 LFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCA 381

Query: 439 -------------YI--------QNGNEDEA------VDLFQRMGKNDKVKR-------- 463
                        Y+         N  ED+       +D++ +  K+ +V R        
Sbjct: 382 SVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKC-KSYRVARSIFDSIEG 440

Query: 464 ---NTASWNSLIAGYQQLGQKNNALGVFRKM--QSSCFYPNCVTILSVLPACAYLVASNK 518
              N  +W  +I GY Q G+ N+AL +F ++  Q +   PN  T+   L ACA L     
Sbjct: 441 KDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRL 500

Query: 519 VKEIHGCVLRRSLESS-LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
            +++H   LR   ES  L V N LID Y+KSG+I  +R +FD M  +++++W SL+ GY 
Sbjct: 501 GRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYG 560

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
           +HG    AL LFDQM+  G   +  TFL ++ A S +GMVD G   F  + + + I P  
Sbjct: 561 MHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGA 620

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
           EHY+ M+DL GR+G+L EAME I++M +EP + +W ALL+A RIH NI+L   A  +L +
Sbjct: 621 EHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTE 680

Query: 698 LEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGW 757
           L   +     L+  +YA   + +D  ++R L +    R   G  WI+ K    TF  G  
Sbjct: 681 LGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVGDR 740

Query: 758 SESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGS 812
           S   S+ +Y+ L ++ + +       ++S +   +++EEK ++   HSEKLA+A+ ++  
Sbjct: 741 SHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEKGDLLFEHSEKLAVAYGIL-- 798

Query: 813 SQAP-HTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           + AP   IRI KN+R+C  CH    Y+SM+   EI L DS   HHFK G CSC  YW
Sbjct: 799 TTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSRFHHFKKGSCSCRSYW 855



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 175/369 (47%), Gaps = 18/369 (4%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-----LNLV---TEIDV 91
           EA+ V   +   G +    T  +LL  C    ++   ++ HA+     LNL     E D+
Sbjct: 353 EALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDL 412

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDM--RERNLYTWSAMIGAYSRDQRWREVVELF--FL 147
            V   L+ +YAKC     AR +F+ +  +++N+ TW+ MIG Y++     + ++LF    
Sbjct: 413 LVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIF 472

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK-LGMSCVRRVRNSVLAVYVKCG 206
             +  L P+ F     L AC   G+   G+ +H+  ++    S V  V N ++ +Y K G
Sbjct: 473 KQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSG 532

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            +  AR  F++M  ++ V+W S+++GY   G  +EA  LFD+M +    +  +TF +++ 
Sbjct: 533 DIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLY 592

Query: 267 SYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
           + +  G  D  M     M +  GITP    + CM+    + GR ++A++L K MS   + 
Sbjct: 593 ACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMS---ME 649

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P  V   + +SA      + +G    S   ++G  +D      L N+Y+     +   R+
Sbjct: 650 PTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSY-TLLSNLYANARRWKDVARI 708

Query: 386 FDMIKDKDV 394
             ++K   +
Sbjct: 709 RSLMKHTGI 717



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/431 (24%), Positives = 189/431 (43%), Gaps = 91/431 (21%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF--LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           T +N+L AC    ++   +++H F   N + + DVFV   L+S+YAKC  +++A +VFE 
Sbjct: 236 TLVNILPACASVFALQHGKQVHGFSVRNGLVD-DVFVGNALVSMYAKCSKMNEANKVFEG 294

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD------------------------- 151
           ++++++ +W+AM+  YS+   +   + LF +M ++                         
Sbjct: 295 IKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEA 354

Query: 152 ----------GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK--LGMSCVRR-----V 194
                     GL P+      +L  C + G    GK  H+ VIK  L ++   +     V
Sbjct: 355 LDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLV 414

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEKDG--VAWNSMISGYFQIGENDEAHRLFDKMCRE 252
            N ++ +Y KC     AR  F+S++ KD   V W  MI GY Q GE ++A +LF ++ ++
Sbjct: 415 LNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQ 474

Query: 253 ----------------------EIKLG----------------VVTFNILIRSYNQLGQC 274
                                 E++LG                +   N LI  Y++ G  
Sbjct: 475 KTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDI 534

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
           D A  +   M+      +V +WT +++G+  +GR  +AL LF +M  +G   +G+T    
Sbjct: 535 DAARAVFDNMK----LRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVV 590

Query: 335 ISACTDLKALAMGM-EIHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDK 392
           + AC+    +  GM   H +    G T        ++++  +   L EA E + +M  + 
Sbjct: 591 LYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEP 650

Query: 393 DVYSWNSMIAG 403
               W ++++ 
Sbjct: 651 TAVVWVALLSA 661


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 281/910 (30%), Positives = 444/910 (48%), Gaps = 99/910 (10%)

Query: 9   FQQLHSL---LTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQ 65
           F  LHSL   L K   P   +T + ++  N R N+   V   I    +     +Y  LL 
Sbjct: 3   FPHLHSLRTVLRKPLKPFIVNTSVKYI-SNLRPND---VSGFILDSSSNPSSISYPKLLL 58

Query: 66  ACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTW 125
               S  +     +HA   ++    + ++ +L+++Y+KC C   AR++  D  E +L +W
Sbjct: 59  QFTASKDVSSGMAIHA--RIIRLGLLGLRNRLVNLYSKCQCFRVARKLVIDSSEPDLVSW 116

Query: 126 SAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH--SLV 183
           SA+I  Y ++ R  E +  ++ M   G   ++F F  +L+ C    + E GK +H  +LV
Sbjct: 117 SALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALV 176

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
            ++  + +     S+  V   C  L          DE  G+     + GY          
Sbjct: 177 TEMISTGISPNEFSLSTVLNACAGL---------EDENYGMK----VHGYL--------- 214

Query: 244 RLFDKMCREEIKLGV----VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                     IKLG      + N L+  Y + G  + A+ +   +      PD+ +W  +
Sbjct: 215 ----------IKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPK----PDIVSWNAV 260

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I+G   + +   AL L  +M    V P+  T++SA+ AC  +  + +G ++HS  +KM  
Sbjct: 261 IAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDM 320

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             D  VG  LI+MYSKC  L+ A  VFD++  KDV  WNS+I+GY   GY  +A  LF  
Sbjct: 321 EPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTN 380

Query: 420 MQESDVPPNVITWNVLIS--------------------------GYIQNGNED------- 446
           M +  +  N  T + ++                           GY+ N   D       
Sbjct: 381 MYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCL 440

Query: 447 --EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
             +A  +F+     D V     ++ S+I  Y Q G    AL ++ +MQ     P+     
Sbjct: 441 LEDAAKVFEVCPAEDLV-----AYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFS 495

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           S+  ACA L A  + K+IH  VL+  L S +   NSL++ YAK G+I  +  IF+ +S +
Sbjct: 496 SLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWR 555

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
            I++W+++I G   HG    AL LF QM   G+ PN  T +S++ A + AG+V   ++ F
Sbjct: 556 GIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFF 615

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
             + + + I P  EHY+ M+D+ GR G+L+EAM  +++MP +  +++W ALL A RIH N
Sbjct: 616 GLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKN 675

Query: 685 IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIE 744
           I+L   A E L  LEP       L+  IYA  G  ++  KVR+  + +  +   G  WIE
Sbjct: 676 IELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIE 735

Query: 745 VKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGL-----CIEEEEKEEISGIH 799
           +K+ VYTF+ G  S   S  +Y  L ++ E +T+      +      +E+ EKE++   H
Sbjct: 736 LKDKVYTFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHH 795

Query: 800 SEKLALAFALIGSSQ-APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
           SEKLA+AF LI +   AP  IR+ KN+R+C+ CH   K++S +   EI + D    HHF+
Sbjct: 796 SEKLAVAFGLIATPPGAP--IRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFR 853

Query: 859 NGQCSCGDYW 868
           +G CSCGDYW
Sbjct: 854 DGSCSCGDYW 863


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 261/814 (32%), Positives = 404/814 (49%), Gaps = 103/814 (12%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM--SCVRRVRNSVLAVYVKCGKLIWARR 213
           D F  P   ++        A + +H   ++  +       V N++L  Y +CG L  A  
Sbjct: 58  DHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALA 117

Query: 214 FFESMDEKDGVAWNSMISGY--FQ--IGEND-------EAHRLFD----------KMCRE 252
            F +M  +D V +NS+I+    F+  +   D       E H L                E
Sbjct: 118 LFNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAE 177

Query: 253 EIKLGV-----------------VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD--V 293
           +++LG                    FN L+  Y +LG  D A  +   +++   +P   V
Sbjct: 178 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTD-SPGGGV 236

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            TW  M+S   Q+GR  +A+++  +M   GV P+G+T  SA+ AC+ L+ L++G E+H+ 
Sbjct: 237 VTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAY 296

Query: 354 AVK-MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD--KDVYSWNSMIAGYCQAGYC 410
            +K      +  V ++L++MY+  E +  A RVFDM+    + +  WN+M+ GY QAG  
Sbjct: 297 VLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMD 356

Query: 411 GKAYELFIKMQESD--VPPNVITWNVL--------------ISGYI-QNGNEDEA----- 448
            +A ELF +M+     VP       VL              + GY+ + G  D       
Sbjct: 357 EEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNA 416

Query: 449 -VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY-- 497
            +DL+ R+G  +  +        R+  SWN+LI G    G  ++A  + R+MQ    +  
Sbjct: 417 LMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTD 476

Query: 498 ----------------PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
                           PN VT++++LP CA L A  K KEIHG  +R +L+S + V ++L
Sbjct: 477 ATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSAL 536

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM-KSFGLKPN 600
           +D YAK G +  SR +FD +  +++ITWN LI  Y +HG    A+ LFD+M  S   KPN
Sbjct: 537 VDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPN 596

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
             TF++ + A S +GMVD G ++F S+   + + P  + ++  +D+ GR+G+L+EA   I
Sbjct: 597 EVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSII 656

Query: 661 EDM-PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKP 719
             M P E   S W + L ACR+H N+ L  +A ERLF LEP +     L+  IY+  G  
Sbjct: 657 TSMEPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLW 716

Query: 720 EDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS-----WLQNVPE 774
           E + +VR   R+       G  WIE+  +++ F+ G  +   S L+++     W +   +
Sbjct: 717 EKSSEVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQ 776

Query: 775 NVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHET 834
             T  +S     IEE EK  I   HSEKLA+AF L+ +     TIR+ KN+R+C  CHE 
Sbjct: 777 GYTPDTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGA-TIRVAKNLRVCNDCHEA 835

Query: 835 AKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           AK++S M   EI L D +  HHF +G CSCGDYW
Sbjct: 836 AKFISRMVGREIVLRDVRRFHHFVDGACSCGDYW 869



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 135/501 (26%), Positives = 221/501 (44%), Gaps = 77/501 (15%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACID-SNSIHLARKLHAFL---NLVT 87
           LC   R   A+  L  +  +G  +   T +++L AC   +  + L R+ HAF      + 
Sbjct: 137 LCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLD 196

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVF-----EDMRERNLYTWSAMIGAYSRDQRWREVV 142
             + F    LLS+YA+ G +DDA+ +F      D     + TW+ M+    +  R  E +
Sbjct: 197 GDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAI 256

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK-LGMSCVRRVRNSVLAV 201
           E+ + MV  G+ PD   F   L AC        G+ MH+ V+K   ++    V ++++ +
Sbjct: 257 EVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANSFVASALVDM 316

Query: 202 YVKCGKLIWARRFFESMD--EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
           Y    ++  ARR F+ +    +    WN+M+ GY Q G ++EA  LF +M   E + GVV
Sbjct: 317 YASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARM---EAEAGVV 373

Query: 260 -----------------TF----------------------NILIRSYNQLGQCDVAMEM 280
                            TF                      N L+  Y +LG  + A  +
Sbjct: 374 PSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDMEAARWI 433

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG----------------- 323
              +E      DV +W  +I+G    G    A  L +EM   G                 
Sbjct: 434 FAAIEPR----DVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDEE 489

Query: 324 -VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
            V+PN VT+ + +  C  L A A G EIH  A++     D+ VG++L++MY+KC  L  +
Sbjct: 490 PVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLALS 549

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM-QESDVPPNVITWNVLISGYIQ 441
             VFD +  ++V +WN +I  Y   G   +A  LF +M   ++  PN +T+   ++    
Sbjct: 550 RAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACSH 609

Query: 442 NGNEDEAVDLFQRMGKNDKVK 462
           +G  D  ++LF  M +N  V+
Sbjct: 610 SGMVDRGMELFHSMKRNHGVQ 630



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/316 (24%), Positives = 133/316 (42%), Gaps = 29/316 (9%)

Query: 31  FLCG---NGRLNEAITVLDSIATQGAKVRRNTYI-NLLQACIDSNSIHLARKLHAF-LNL 85
            +CG    G   EA+ +   +  +   V   T I  +L AC  S +      +H + L  
Sbjct: 346 MVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKR 405

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
               + FV+  L+ +YA+ G ++ AR +F  +  R++ +W+ +I          +  +L 
Sbjct: 406 GMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLV 465

Query: 146 FLMVQDGLF------------------PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
             M Q G F                  P++     +L  C        GK +H   ++  
Sbjct: 466 REMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHA 525

Query: 188 MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
           +     V ++++ +Y KCG L  +R  F+ + +++ + WN +I  Y   G  DEA  LFD
Sbjct: 526 LDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFD 585

Query: 248 KMC-REEIKLGVVTFNILIRSYNQLGQCDVAMEM---VKRMESLGITPDVFTWTCMISGF 303
           +M    E K   VTF   + + +  G  D  ME+   +KR   +  TPD+    C +   
Sbjct: 586 RMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLH--ACAVDIL 643

Query: 304 AQNGRTSQALDLFKEM 319
            + GR  +A  +   M
Sbjct: 644 GRAGRLDEAYSIITSM 659


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 252/806 (31%), Positives = 394/806 (48%), Gaps = 127/806 (15%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           ++++F++  ++ L   + ++  +SR+ + +E + LF  + + G   D      +L+ CG 
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
             D   GK +H   IK G                          F E     D     S+
Sbjct: 105 LFDRIVGKQVHCQCIKCG--------------------------FVE-----DVSVGTSL 133

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           +  Y +    ++  R+FD+M                                        
Sbjct: 134 VDMYMKTESVEDGERVFDEM---------------------------------------R 154

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             +V +WT +++G+ QNG   QAL LF +M   G+ PN  T  + +       A+  G++
Sbjct: 155 VKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQ 214

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H++ +K G    + VGNS++NMYSK   +  A+ VFD +++++  SWNSMIAG+   G 
Sbjct: 215 VHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGL 274

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLIS----------------GYIQNGNE-------- 445
             +A+ELF +M+   V      +  +I                   I+NG++        
Sbjct: 275 DLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTA 334

Query: 446 -----------DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ-S 493
                      D+A  LF  M       +N  SW ++I+GY Q G+ + A+ +F +M+  
Sbjct: 335 LMVAYSKCSEIDDAFKLFCMMHG----VQNVVSWTAIISGYVQNGRTDRAMNLFCQMRRE 390

Query: 494 SCFYPNCVTILSVLPACAYLVAS-NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
               PN  T  SVL ACA   AS  + K+ H C ++    ++L V ++L+  YAK GNI 
Sbjct: 391 EGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIE 450

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            +  +F     +D+++WNS+I GY  HG    +L +F++M+S  L+ +  TF+ +I A +
Sbjct: 451 SANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACT 510

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
            AG+V+ G++ F  + + Y I+P +EHYS M+DLY R+G LE+AM+ I  MP    ++IW
Sbjct: 511 HAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIW 570

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
             LL ACR+H N+ L  LA E+L  L+P D     L+  IYA  G  ++  KVRKL    
Sbjct: 571 RTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMK 630

Query: 733 TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------ 786
             +   G  WIEVKN  ++F+ G  S   SD +Y  L    E ++ R   +G        
Sbjct: 631 KVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKL----EELSIRLKDAGYYPDTKYV 686

Query: 787 ---IEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMH 842
              +EEE KE I   HSE+LA+AF LI +   P T I+IVKN+R+C  CH   K +S + 
Sbjct: 687 LHDVEEEHKEVILSQHSERLAIAFGLIAT--PPGTPIQIVKNLRVCGDCHTVIKLISKIE 744

Query: 843 HCEIFLADSKCLHHFKNGQCSCGDYW 868
             +I + DS   HHFK G CSCGDYW
Sbjct: 745 GRDIVVRDSNRFHHFKGGSCSCGDYW 770



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 236/459 (51%), Gaps = 45/459 (9%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DV V T L+ +Y K   ++D   VF++MR +N+ +W++++  Y ++    + ++LF  M 
Sbjct: 126 DVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQ 185

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            +G+ P+ F F  +L      G  E G  +H++VIK G+     V NS++ +Y K   + 
Sbjct: 186 LEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVS 245

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR--- 266
            A+  F+SM+ ++ V+WNSMI+G+   G + EA  LF +M  E +KL    F  +I+   
Sbjct: 246 DAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCA 305

Query: 267 --------------------------------SYNQLGQCDVAMEMVKRMESLGITPDVF 294
                                           +Y++  + D A ++   M  +    +V 
Sbjct: 306 NIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGV---QNVV 362

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSF-VGVMPNGVTITSAISACTDLKA-LAMGMEIHS 352
           +WT +ISG+ QNGRT +A++LF +M    GV PN  T +S ++AC    A +  G + HS
Sbjct: 363 SWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHS 422

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
            ++K GF++ + V ++L+ MY+K   +E+A  VF    D+D+ SWNSMI+GY Q G   K
Sbjct: 423 CSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKK 482

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
           + ++F +M+  ++  + IT+  +IS     G  +E    F  M K+  +      ++ ++
Sbjct: 483 SLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMV 542

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTI-LSVLPAC 510
             Y + G    A+ +  KM     +P   TI  ++L AC
Sbjct: 543 DLYSRAGMLEKAMDLINKMP----FPAGATIWRTLLAAC 577


>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
          Length = 751

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 246/751 (32%), Positives = 401/751 (53%), Gaps = 51/751 (6%)

Query: 54  KVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDA 110
           ++    Y  LLQ C+   ++H  R++HA +     +  ++ +++TKL+  YAKC   + +
Sbjct: 7   RIGPEVYGELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEAS 66

Query: 111 REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
             +F  +R +N+++W+A+IG   R   ++E +  F  M ++GL PD+F+ P +L+ACG  
Sbjct: 67  NSLFRRVRLKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGL 126

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV-KCGKLIWARRFFESMDEKDGVAWNSM 229
                GK++H LV     SC           YV K       ++    M +++ VAWNSM
Sbjct: 127 EWIRIGKVVHGLV-----SCG----------YVWKMWGGGGCKKGVCGMPQRNAVAWNSM 171

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ-------------CDV 276
           I GY Q G N+EA  +F +M  E ++   VT +  + +   LG              C +
Sbjct: 172 IVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGI 231

Query: 277 AME---------------MVKRMESL---GITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
            M                +++  ES+    +  DV TW  +ISG+ Q G   +AL++   
Sbjct: 232 EMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHL 291

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M    +  + VT+ + +SA  D++ L +G E H   ++     DV+V +S+++MY+KCE+
Sbjct: 292 MRLENLRFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEK 351

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           +  A RVF+    KD+  WN+M+A + + G+ G+A  LF +MQ   VPPNVI+WN LI G
Sbjct: 352 IGCARRVFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILG 411

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
           ++ +G  +EA D+F +M ++  V+ N  +W +LI+G  + G    A+  F++MQ +   P
Sbjct: 412 FLNSGQVNEAKDMFLQM-QSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKP 470

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           N V+I+ VL AC  L +    + +HG ++R SL  S+P+  SL+D YAK G+   ++ +F
Sbjct: 471 NVVSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVF 530

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           D +  K++  +N++I G+ LHG    AL L+  +K  GLKP+  TF + + A S A MV 
Sbjct: 531 DMIPDKELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVS 590

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            G ++F  +   + I P IEHY  M+ L  R G L+EA   I  MP +PD  I  +LL A
Sbjct: 591 EGLELFVDMVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAA 650

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
           CR H  I+L      +L  L+P +      +   YA  G+ ++  KVR+L +E   R   
Sbjct: 651 CREHNKIELEEYLSNQLLKLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIP 710

Query: 739 GQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
           G  WI+V   +  FV G  S   ++ +Y+ L
Sbjct: 711 GCSWIQVGEELNVFVAGDKSHPETEEIYTTL 741



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 248/477 (51%), Gaps = 4/477 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFV 93
           NG   EAI V   +  +G +  + T  + L A  +  ++   ++ HA   +   E+   +
Sbjct: 178 NGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNL 237

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L++ Y+K G ++DA  VF  M E+++ TW+ +I  Y +     + + +  LM  + L
Sbjct: 238 GSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENL 297

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             D      ++ A  +  + + GK  H   I+  +     V +S++ +Y KC K+  ARR
Sbjct: 298 RFDSVTLATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARR 357

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F S   KD + WN+M++ + ++G + EA  LF +M  E +   V+++N LI  +   GQ
Sbjct: 358 VFNSSITKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQ 417

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
            + A +M  +M+SLG+ P++ TWT +ISG A++G   +A+  F+ M   GV PN V+I  
Sbjct: 418 VNEAKDMFLQMQSLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIG 477

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            + AC +L +L +G  +H   ++      + +  SL++MY+KC + + A+RVFDMI DK+
Sbjct: 478 VLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKE 537

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ 453
           +  +N+MI+G+   G   +A  L+  ++E  + P+ IT+   +          E ++LF 
Sbjct: 538 LPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFV 597

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            M  N  +  +   +  +++   + G  + A G+   M    + P+   + S+L AC
Sbjct: 598 DMVSNHNINPSIEHYGCMVSLLSRCGDLDEAFGLISAMP---YKPDVQILGSLLAAC 651



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 2/160 (1%)

Query: 9   FQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACI 68
           F Q+ SL   + N     T +  L  +G   EAI     +   G K    + I +L ACI
Sbjct: 425 FLQMQSL-GVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACI 483

Query: 69  DSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSA 127
           +  S+ + R LH +L      + + + T L+ +YAKCG  D A+ VF+ + ++ L  ++A
Sbjct: 484 NLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPIYNA 543

Query: 128 MIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC 167
           MI  ++   +  E + L+  + ++GL PD+  F   L AC
Sbjct: 544 MISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYAC 583


>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
          Length = 1073

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 265/909 (29%), Positives = 447/909 (49%), Gaps = 89/909 (9%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
            +GR  EA  +   +  +G K  +NT+I++L AC    ++    ++H+ +     E DV V
Sbjct: 179  HGRDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNV 238

Query: 94   KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
             T L+++Y KCG L+ AR+VF +MRERN+ +W+AMI  Y +    RE + LF  +++ G+
Sbjct: 239  STALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGI 298

Query: 154  FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             P+   F  IL AC N  D   G  +H+ + + G+     V N+++++Y +CG L  AR+
Sbjct: 299  QPNKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQ 358

Query: 214  FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
             F+++   +   WN+MI+GY + G  +EA RLF  M ++  +    T+  L+        
Sbjct: 359  VFDNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRAD 417

Query: 274  CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM---------SFVG- 323
             D   E+  ++ S G   D+   T +IS +A+ G   +A  +F +M         +F+  
Sbjct: 418  LDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISC 477

Query: 324  ---------------------VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
                                 V P+ +T  + +++CT  + L  G  IH    + G   +
Sbjct: 478  CCRHDLGKEAFQAFKQMRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSN 537

Query: 363  VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK--- 419
              V N+LI+MY +C  L  A  VF  I+ +D+ SWN+MIA   Q G  G A++LF K   
Sbjct: 538  NHVANALISMYGRCGNLADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRS 597

Query: 420  --------------------------------MQESDVPPNVITWNVLISGYIQNGNEDE 447
                                            +++     ++     LI  Y + G+  +
Sbjct: 598  EGGKGDKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRD 657

Query: 448  AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
            A ++F  + + D V      WN+++A Y    +  +AL +F++MQ     P+  T  + L
Sbjct: 658  AENVFSTVQEKDVV-----CWNAMLAAYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTAL 712

Query: 508  PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
             ACA L A    K+IH  +    +E+   V NSLI+ Y++ G +  ++ +F+ M S+DI 
Sbjct: 713  NACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDIN 772

Query: 568  TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
            +WN+LI GY  +G  + AL+ ++ M    + PN+ TF SI+ +++  G  +       SI
Sbjct: 773  SWNALIAGYCQNGQGNIALEYYELMLRASIVPNKATFTSILSSYAQLGEEEQAFDFLESI 832

Query: 628  TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
             + + + P  +HY+ M+   GR+G L+EA EFIE++  E  + +WE+LL ACRIH N++L
Sbjct: 833  KKEWNMEPSEQHYAYMVAALGRAGLLKEAEEFIEEISAESAALMWESLLVACRIHLNVEL 892

Query: 688  AVLAIERLFDLEP-GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
            A  A+E L D +      +   ++ IYA  G+ ED + V K   +     +   C IEV 
Sbjct: 893  AETAVEHLLDAKAQASPAVCEQLMSIYAAAGRWED-VSVLKTTMQEAGLVALKSCTIEVN 951

Query: 747  NLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEE-------EKEEISGIH 799
            +  + F+    S          +Q   E +  + +  G  ++ +       EKE +    
Sbjct: 952  SEFHNFIANHLSPQIG------VQCKIEELVRKMTDRGFSLDPQYASNDSREKECLFFQC 1005

Query: 800  SEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKN 859
             E LA+A+ L  ++    +IR V + R+    HE  K++S  +   I + D  C H F++
Sbjct: 1006 PELLAVAYGLEHTASGV-SIRCVTDSRVTDPSHEMLKFISRAYDRGILVRDPNCFHIFED 1064

Query: 860  GQCSCGDYW 868
            G CSCGDYW
Sbjct: 1065 GICSCGDYW 1073



 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 216/749 (28%), Positives = 357/749 (47%), Gaps = 86/749 (11%)

Query: 48  IATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGC 106
           +  +G +   N Y   LQ C+ + S+   +K+H  +     + D+++   L+S+Y+KCG 
Sbjct: 91  LGKRGVQANLNFYARRLQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGS 150

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           ++DA  VF+ M ++++ +W+AMI  Y+   R +E  +LF+ M ++GL P+   F  IL A
Sbjct: 151 IEDANNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKPNQNTFISILSA 210

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C +    E G+ +HS + K G      V  +++ +Y KCG L  AR+ F  M E++ V+W
Sbjct: 211 CQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSW 270

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------------- 261
            +MISGY Q G++ EA  LF K+ R  I+   V+F                         
Sbjct: 271 TAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPNDLGEGLKLHAYIKQ 330

Query: 262 ----------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQ 311
                     N LI  Y++ G    A ++   + SL  T    TW  MI+G+ + G   +
Sbjct: 331 AGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRT----TWNAMIAGYGE-GLMEE 385

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           A  LF+ M   G  P+  T  S ++ C D   L  G E+HS     G+  D+ V  +LI+
Sbjct: 386 AFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALIS 445

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MY+KC   E A +VF+ + +++V SWN+ I+  C+     +A++ F +M+  DV P+ IT
Sbjct: 446 MYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDVNPDHIT 505

Query: 432 W-----------------------------------NVLISGYIQNGNEDEAVDLFQRMG 456
           +                                   N LIS Y + GN  +A ++F R+ 
Sbjct: 506 FITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAREVFYRI- 564

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
                +R+  SWN++IA   Q G   +A  +FRK +S     +  T ++VL A A L   
Sbjct: 565 ----RRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLEDL 620

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
           +  + IHG V +      + V+ +LI  Y+K G++  +  +F  +  KD++ WN+++  Y
Sbjct: 621 DAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLAAY 680

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
                   AL LF QM+  G+ P+  T+ + + A +    V+ GKK+   + E   +   
Sbjct: 681 AHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEA-GMETD 739

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA-CRI-HGNIDLAVLAIER 694
               +++I++Y R G L  A +  E M +  D + W AL+   C+   GNI L    +  
Sbjct: 740 TRVSNSLIEMYSRCGCLCSAKQVFEKM-LSRDINSWNALIAGYCQNGQGNIALEYYELML 798

Query: 695 LFDLEPGDVLIQRLILQIYAICGKPEDAL 723
              + P        IL  YA  G+ E A 
Sbjct: 799 RASIVPNKATFTS-ILSSYAQLGEEEQAF 826



 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 146/478 (30%), Positives = 241/478 (50%), Gaps = 32/478 (6%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVF 92
           G G + EA  +  ++  +G +  + TY +LL  C D   +   ++LH+ +     + D+ 
Sbjct: 379 GEGLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLT 438

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V T L+S+YAKCG  ++AR+VF  M ERN+ +W+A I    R    +E  + F  M +D 
Sbjct: 439 VATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDD 498

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + PD   F  +L +C +  D E G+ +H  + + GM     V N+++++Y +CG L  AR
Sbjct: 499 VNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGNLADAR 558

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
             F  +  +D  +WN+MI+   Q G N  A  LF K   E  K    TF  ++R+   L 
Sbjct: 559 EVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKGDKYTFINVLRAVANLE 618

Query: 273 QCDVA----------------------MEMVKRMESLGITPDVFT---------WTCMIS 301
             D                        ++M  +  SL    +VF+         W  M++
Sbjct: 619 DLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVFSTVQEKDVVCWNAMLA 678

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
            +A + R   AL LF++M   GV P+  T ++A++AC  L A+  G +IH+   + G   
Sbjct: 679 AYAHSDRGQDALKLFQQMQLEGVNPDSSTYSTALNACARLTAVEHGKKIHAQLKEAGMET 738

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           D  V NSLI MYS+C  L +A++VF+ +  +D+ SWN++IAGYCQ G    A E +  M 
Sbjct: 739 DTRVSNSLIEMYSRCGCLCSAKQVFEKMLSRDINSWNALIAGYCQNGQGNIALEYYELML 798

Query: 422 ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
            + + PN  T+  ++S Y Q G E++A D  + + K   ++ +   +  ++A   + G
Sbjct: 799 RASIVPNKATFTSILSSYAQLGEEEQAFDFLESIKKEWNMEPSEQHYAYMVAALGRAG 856



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 171/358 (47%), Gaps = 42/358 (11%)

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M+ +   P++   N+LIS Y + G+ ++A ++FQ M   D V     SWN++I+GY   G
Sbjct: 126 MRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDVV-----SWNAMISGYALHG 180

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
           +   A  +F +MQ     PN  T +S+L AC   +A    ++IH  + +   ES + V  
Sbjct: 181 RDQEAADLFYQMQREGLKPNQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVST 240

Query: 540 SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
           +LI+ Y K G++  +R +F+ M  +++++W ++I GYV HG    AL LF ++   G++P
Sbjct: 241 ALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQP 300

Query: 600 NRGTFLSIILA-------------HSLAGMVDLGKKVFC------------SITECYQII 634
           N+ +F SI+ A             H+      L ++V              S+    Q+ 
Sbjct: 301 NKVSFASILGACTNPNDLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVF 360

Query: 635 PMIEH-----YSAMIDLYGRSGKLEEAMEF---IEDMPIEPDSSIWEALLTACRIHGNID 686
             +       ++AMI  YG  G +EEA      +E    +PD   + +LL  C    ++D
Sbjct: 361 DNLRSLNRTTWNAMIAGYGE-GLMEEAFRLFRAMEQKGFQPDKFTYASLLAICADRADLD 419

Query: 687 LAVLAIERLFDLE-PGDVLIQRLILQIYAICGKPEDALKV--RKLERENTRRNSFGQC 741
                  ++       D+ +   ++ +YA CG PE+A KV  +  ER     N+F  C
Sbjct: 420 RGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISC 477


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 259/833 (31%), Positives = 402/833 (48%), Gaps = 84/833 (10%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A  +F+   +R+  ++++++  +SRD R +E   LF  +   G+  D  +F  +L+    
Sbjct: 50  AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
             D   G+ +H   IK G      V  S++  Y+K       R  F+ M E++ V W ++
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------------------------- 261
           ISGY +   N+E   LF +M  E  +    TF                            
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL 229

Query: 262 -------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
                  N LI  Y + G    A  +  + E       V TW  MISG+A NG   +AL 
Sbjct: 230 DKTIPVSNSLINLYLKCGNVRKARILFDKTE----VKSVVTWNSMISGYAANGLDLEALG 285

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
           +F  M    V  +  +  S I  C +LK L    ++H   VK GF  D  +  +L+  YS
Sbjct: 286 MFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYS 345

Query: 375 KCEELEAAERVFDMIKD-KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
           KC  +  A R+F       +V SW +MI+G+ Q     +A  LF +M+   V PN  T++
Sbjct: 346 KCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYS 405

Query: 434 V-------------------------------LISGYIQNGNEDEAVDLFQRMGKNDKVK 462
           V                               L+  Y++ G  DEA  +F  +   D V 
Sbjct: 406 VILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIV- 464

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS-NKVKE 521
               +W++++AGY Q G+   A+ +F ++      PN  T  S+L  CA   AS  + K+
Sbjct: 465 ----AWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQ 520

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
            HG  ++  L+SSL V ++L+  YAK G+I  +  +F     KD+++WNS+I GY  HG 
Sbjct: 521 FHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQ 580

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
              ALD+F +MK   +K +  TF+ +  A + AG+V+ G+K F  +    +I P  EH S
Sbjct: 581 AMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNS 640

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            M+DLY R+G+LE+AM+ I++MP    S+IW  +L ACR+H   +L  LA E++  + P 
Sbjct: 641 CMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPE 700

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
           D     L+  +YA  G  ++  KVRKL  E   +   G  WIEVKN  Y F+ G  S   
Sbjct: 701 DSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPL 760

Query: 762 SDLLYSWLQNVPENVT-----ARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAP 816
            D +Y  L+++   +        +S+    I++E KE +   HSE+LA+AF LI + +  
Sbjct: 761 KDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGS 820

Query: 817 HTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF-KNGQCSCGDYW 868
             + I+KN+R+C  CH   K ++ +   EI + DS   HHF  +G CSCGD+W
Sbjct: 821 PLL-IIKNLRVCGDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 177/643 (27%), Positives = 295/643 (45%), Gaps = 93/643 (14%)

Query: 16  LTKKSNPRFRDTHLDFLCG---NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNS 72
           L  KS  R R+++   L G   +GR  EA  +  +I   G ++  + + ++L+       
Sbjct: 53  LFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCD 112

Query: 73  IHLARKLH------AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWS 126
               R+LH       FL+     DV V T L+  Y K     D R VF++M+ERN+ TW+
Sbjct: 113 ELFGRQLHCQCIKFGFLD-----DVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWT 167

Query: 127 AMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL 186
            +I  Y+R+    EV+ LF  M  +G  P+ F F   L      G    G  +H++V+K 
Sbjct: 168 TLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 227

Query: 187 GMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF 246
           G+     V NS++ +Y+KCG +  AR  F+  + K  V WNSMISGY   G + EA  +F
Sbjct: 228 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 287

Query: 247 DKMCREEIKLGVVTFNILI---------RSYNQL-----------------------GQC 274
             M    ++L   +F  +I         R   QL                        +C
Sbjct: 288 YSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKC 347

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
              ++ ++  +  G   +V +WT MISGF QN    +A+ LF EM   GV PN  T +  
Sbjct: 348 MAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVI 407

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           ++A   +       E+H+  VK  +     VG +L++ Y K  +++ A +VF  I +KD+
Sbjct: 408 LTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDI 463

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---------------------- 432
            +W++M+AGY QAG    A ++F ++ +  V PN  T+                      
Sbjct: 464 VAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHG 523

Query: 433 --------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
                         + L++ Y + G+ + A ++F+R  + D V     SWNS+I+GY Q 
Sbjct: 524 FAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLV-----SWNSMISGYAQH 578

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           GQ   AL VF++M+      + VT + V  AC +     + ++    ++R    +     
Sbjct: 579 GQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEH 638

Query: 539 NS-LIDTYAKSGNIVYSRTIFDGMSSKDIIT-WNSLICGYVLH 579
           NS ++D Y+++G +  +  + D M +    T W +++    +H
Sbjct: 639 NSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVH 681


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 268/871 (30%), Positives = 428/871 (49%), Gaps = 108/871 (12%)

Query: 91  VFVKTKLLSVYAKCGCLDD----------AREVFEDMRERNLYTWSA----MIGAYSRDQ 136
           VF   K LS  A    L+D          AR+  + M  R+    S+     I  Y R  
Sbjct: 19  VFGSLKPLSALASAARLEDDCADTCNAPGARQALDGMPSRDAAAGSSSNPVAIVDYGRRG 78

Query: 137 RWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR-RVR 195
           + R      F+ V            ++L+ CG   D  +G+ +H L +K G       V 
Sbjct: 79  KGRGEALDHFVDVHRCGRVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVG 138

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE--- 252
            +++ +Y+KCG +   R  FE M +++ V W S+++GY Q     +   LF +M  E   
Sbjct: 139 TALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVW 198

Query: 253 ----------------------------EIKLG----VVTFNILIRSYNQLGQCDVAMEM 280
                                        +K G    V   N LI  Y++ G  + A  +
Sbjct: 199 PNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAV 258

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
            ++ME    T D+ +W  +++G   N    +AL LF +        +  T ++ I  C +
Sbjct: 259 FRQME----TRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCAN 314

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNS 399
           LK LA+  ++HS  +K GF  D  V  ++++ YSKC EL+ A  +F ++   ++V SW +
Sbjct: 315 LKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTA 374

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV------------------------- 434
           MI G  Q      A  LF +M+E +V PN  T++                          
Sbjct: 375 MIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILLPQIHAQIIKTNYQHA 434

Query: 435 ------LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
                 L++ Y + GN +EA+ +F+ +   D V     +W+++++ Y Q G  + A  VF
Sbjct: 435 PSVGTALLASYSKLGNTEEALSIFKMIDHKDVV-----AWSAMLSCYSQAGDCDGATNVF 489

Query: 489 RKMQSSCFYPNCVTILSVLPACAYLVAS-NKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
            KM      PN  TI S + ACA   A  ++ ++ H   ++   + ++ V ++L+  YA+
Sbjct: 490 IKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYAR 549

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G+I  +R +F+  + +D+++WNS+I GY  HG+   ALD F QM++ G++ +  TFL++
Sbjct: 550 KGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAV 609

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           I+  + AG+V  G++ F S+   + I P +EHYS M+DLY R+GKL+E M  IE MP   
Sbjct: 610 IVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPA 669

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
            + +W  LL ACR+H N++L  LA ++L  LEP D     L+  IYA  G+ ++  +VRK
Sbjct: 670 GAMVWRTLLGACRVHKNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRK 729

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC- 786
           L      +   G  WI++KN V++F+    S   S+ +Y+ L+     +T R    G C 
Sbjct: 730 LMDSKKVKKEAGCSWIQIKNKVHSFIACDKSHPLSEQIYAKLK----AMTTRLKQEGYCP 785

Query: 787 --------IEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKY 837
                   I EE+KE +  +HSE+LALAF LI +   P T ++IVKN+R+C  CH   K 
Sbjct: 786 NTSVVLHDIAEEQKETMLVMHSERLALAFGLIATP--PRTPLQIVKNLRVCGDCHMVMKM 843

Query: 838 VSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           VS++   EI + D    HHF  G CSCGD+W
Sbjct: 844 VSLIEDREIIMRDCSRFHHFNAGACSCGDFW 874



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 150/566 (26%), Positives = 259/566 (45%), Gaps = 91/566 (16%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           +V V T L+ +Y KCG ++D R VFE M +RN+ TW++++  Y + +   +V+ LFF M 
Sbjct: 134 EVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMR 193

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            +G++P+ F F  +L A  + G  + G+ +H+  +K G      V NS++ +Y KCG + 
Sbjct: 194 AEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVE 253

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR--- 266
            A+  F  M+ +D V+WN++++G        EA +LF        KL   T++ +I+   
Sbjct: 254 EAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCA 313

Query: 267 --------------------------------SYNQLGQCDVAMEMVKRMESLGITPDVF 294
                                           +Y++ G+ D A  +   M     + +V 
Sbjct: 314 NLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPG---SQNVV 370

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +WT MI G  QN     A  LF  M    V PN  T ++ ++A   +    +  +IH+  
Sbjct: 371 SWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPI----LLPQIHAQI 426

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           +K  +     VG +L+  YSK    E A  +F MI  KDV +W++M++ Y QAG C  A 
Sbjct: 427 IKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGAT 486

Query: 415 ELFIKMQESDVPPNVIT------------------------------------WNVLISG 438
            +FIKM    + PN  T                                     + L++ 
Sbjct: 487 NVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTM 546

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
           Y + G+ D A  +F+R     +  R+  SWNS+I+GY Q G    AL  FR+M++     
Sbjct: 547 YARKGSIDSARIVFER-----QTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEM 601

Query: 499 NCVTILSVLPACAYLVASNKVKE----IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
           +  T L+V+  C +   +  VKE        V+  ++  ++   + ++D Y+++G +  +
Sbjct: 602 DGATFLAVIVGCTH---AGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDET 658

Query: 555 RTIFDGMS-SKDIITWNSLICGYVLH 579
             + +GM      + W +L+    +H
Sbjct: 659 MNLIEGMPFPAGAMVWRTLLGACRVH 684



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 208/470 (44%), Gaps = 51/470 (10%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL 98
           EA+ +        AK+ ++TY  +++ C +   + LAR+LH+  L      D  V T ++
Sbjct: 285 EALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIM 344

Query: 99  SVYAKCGCLDDAREVFEDMR-ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
             Y+KCG LDDA  +F  M   +N+ +W+AMIG   ++        LF  M +D + P++
Sbjct: 345 DAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNE 404

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
           F +  +L A            +H+ +IK        V  ++LA Y K G    A   F+ 
Sbjct: 405 FTYSTVLTASIPI----LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKM 460

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------------- 261
           +D KD VAW++M+S Y Q G+ D A  +F KM  + +K    T                 
Sbjct: 461 IDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQ 520

Query: 262 --------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                               + L+  Y + G  D A  + +R        D+ +W  MIS
Sbjct: 521 GRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDR----DLVSWNSMIS 576

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFT 360
           G+AQ+G + +ALD F++M  VG+  +G T  + I  CT    +  G +   S+ +    +
Sbjct: 577 GYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNIS 636

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             +   + ++++YS+  +L+    + + M        W +++ G C+     +  +L  +
Sbjct: 637 PTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLL-GACRVHKNVELGKLAAQ 695

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
                 P +  T+ +L + Y   G   E  D  +++  + KVK+    SW
Sbjct: 696 KLLLLEPDDSATYVLLSNIYAAAGRWKER-DEVRKLMDSKKVKKEAGCSW 744



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 5/210 (2%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNS-IHLARKLHAF-LNLVTEIDVFV 93
           G  + A  V   ++ QG K    T  + + AC    + I   R+ HA  +    +  + V
Sbjct: 480 GDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICV 539

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+++YA+ G +D AR VFE   +R+L +W++MI  Y++    +E ++ F  M   G+
Sbjct: 540 GSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGI 599

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             D   F  ++  C + G  + G +   S+V+   +S      + ++ +Y + GKL    
Sbjct: 600 EMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETM 659

Query: 213 RFFESMDEKDG-VAWNSMISGYFQIGENDE 241
              E M    G + W +++ G  ++ +N E
Sbjct: 660 NLIEGMPFPAGAMVWRTLL-GACRVHKNVE 688


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 233/644 (36%), Positives = 346/644 (53%), Gaps = 49/644 (7%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           ++  Y +  Q + A  M  RM       D+  W  MISG+AQNG    AL L   MS  G
Sbjct: 71  VVNMYAKCRQINDAYNMFDRMPE----RDLVCWNTMISGYAQNGFAKVALMLVLRMSEEG 126

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
             P+ +TI S + A  D + L +GM +H   ++ GF   V V  +L++MYSKC  +  A 
Sbjct: 127 HRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIAR 186

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT------------ 431
            +FD +  + V SWNSMI GY Q+G    A  +F KM +  V P  +T            
Sbjct: 187 VIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLG 246

Query: 432 -----------------------WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                                   N LIS Y +    D A D+F+ +       +   SW
Sbjct: 247 DLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRN-----KTLVSW 301

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           N++I GY Q G  N AL  F +MQS    P+  T++SV+PA A L    + K IHG V+R
Sbjct: 302 NAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIR 361

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
           R L+ ++ VM +L+D YAK G I  +R +FD M+++ +ITWN++I GY  HG    +++L
Sbjct: 362 RFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVEL 421

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F +MK   +KPN  TFL  + A S +G+V+ G   F S+ + Y I P ++HY AM+DL G
Sbjct: 422 FKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLG 481

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+G+L +A +FI+ MPI+P  +++ A+L AC+IH N+DL   A   +F L P D     L
Sbjct: 482 RAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVL 541

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  IYA         KVR +  ++  + + G   +E+ N V++F +G  S   S  +YS+
Sbjct: 542 LANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHPQSKKIYSY 601

Query: 769 LQNVPENVTARS----SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
           L+ + + + A      ++S   +E++ K ++   HSEKLA+AF L+ +S     I I KN
Sbjct: 602 LETLVDEIRAAGYVPDTNSIHDVEDDVKVQLLNTHSEKLAIAFGLLNTSTGT-PIHIRKN 660

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +R+C  CH   KY+S++   EI + D    H FK+G CSCGDYW
Sbjct: 661 LRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704



 Score =  212 bits (539), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 243/511 (47%), Gaps = 47/511 (9%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTE---IDVFVK 94
           L+ A++    +     +     +  LL+ C D++ +   +++H   +++T     ++F  
Sbjct: 11  LDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHG--SVITSGFSWNLFAM 68

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T ++++YAKC  ++DA  +F+ M ER+L  W+ MI  Y+++   +  + L   M ++G  
Sbjct: 69  TGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHR 128

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD      IL A  +      G  +H  V++ G   +  V  +++ +Y KCG +  AR  
Sbjct: 129 PDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVI 188

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT-------------- 260
           F+ MD +  V+WNSMI GY Q G+ + A  +F KM  E ++   VT              
Sbjct: 189 FDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDL 248

Query: 261 ---------------------FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                                 N LI  Y++  + D+A ++ K + +      + +W  M
Sbjct: 249 ERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRN----KTLVSWNAM 304

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I G+AQNG  ++AL+ F EM    + P+  T+ S I A  +L        IH L ++   
Sbjct: 305 ILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFL 364

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             +V V  +L++MY+KC  +  A ++FDM+  + V +WN+MI GY   G    + ELF +
Sbjct: 365 DKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKE 424

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M++  + PN IT+   +S    +G  +E +  F+ M K+  ++     + +++    + G
Sbjct: 425 MKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAG 484

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           + N A    +KM      P      ++L AC
Sbjct: 485 RLNQAWDFIQKMP---IKPGITVYGAMLGAC 512



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 152/568 (26%), Positives = 246/568 (43%), Gaps = 88/568 (15%)

Query: 128 MIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
           M+  Y++       +  F  M  D + P  + F  +L+ CG+  D + GK +H  VI  G
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 188 MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
            S        V+ +Y KC ++  A   F+ M E+D V WN+MISGY Q G    A  L  
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 248 KMCREE--------------------IKLGVVTFNILIRS-YNQLGQCDVAM-EMVKRME 285
           +M  E                     +++G+     ++R+ +  L     A+ +M  +  
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 286 SLGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
           S+ I   +F         +W  MI G+ Q+G    A+ +F++M   GV P  VT+  A+ 
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           AC DL  L  G  +H L  ++    DV V NSLI+MYSKC+ ++ A  +F  +++K + S
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVS 300

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPP----------------------------- 427
           WN+MI GY Q G   +A   F +MQ  ++ P                             
Sbjct: 301 WNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVI 360

Query: 428 ------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK 481
                 NV     L+  Y + G    A  LF  M       R+  +WN++I GY   G  
Sbjct: 361 RRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMN-----ARHVITWNAMIDGYGTHGLG 415

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL---PVM 538
             ++ +F++M+     PN +T L  L AC++   S  V+E  G     S++      P M
Sbjct: 416 KTSVELFKEMKKGTIKPNDITFLCALSACSH---SGLVEE--GLCFFESMKKDYGIEPTM 470

Query: 539 N---SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ--MK 593
           +   +++D   ++G +  +      M  K  IT    + G       H  +DL ++   +
Sbjct: 471 DHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACK---IHKNVDLGEKAAFE 527

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGK 621
            F L P+ G +  ++LA+  A     GK
Sbjct: 528 IFKLNPDDGGY-HVLLANIYATASMWGK 554



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 131/468 (27%), Positives = 215/468 (45%), Gaps = 66/468 (14%)

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           M+ G+A++     AL  F  M    V P     T  +  C D   L  G EIH   +  G
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
           F+ ++     ++NMY+KC ++  A  +FD + ++D+  WN+MI+GY Q G+   A  L +
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 419 KMQESDVPPNVIT---------------WNVLISGYI-QNGNED------EAVDLFQRMG 456
           +M E    P+ IT                 + + GY+ + G E         VD++ + G
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180

Query: 457 KNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
                +        R   SWNS+I GY Q G    A+ +F+KM      P  VT++  L 
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT 568
           ACA L    + K +H  V +  L+S + VMNSLI  Y+K   +  +  IF  + +K +++
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVS 300

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA-------------HSLAG 615
           WN++I GY  +G  + AL+ F +M+S  +KP+  T +S+I A             H L  
Sbjct: 301 WNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVI 360

Query: 616 MVDLGKKVFC------------SITECYQIIPMIEH-----YSAMIDLYGRSGKLEEAME 658
              L K VF             +I    ++  M+       ++AMID YG  G  + ++E
Sbjct: 361 RRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVE 420

Query: 659 FIEDM---PIEPDSSIWEALLTACRIHGNIDLAVLAIERL---FDLEP 700
             ++M    I+P+   +   L+AC   G ++  +   E +   + +EP
Sbjct: 421 LFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEP 468


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 253/769 (32%), Positives = 394/769 (51%), Gaps = 75/769 (9%)

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
           C      K +H+L++  G +    +   ++  Y   G +  AR  F+ +  KD   WNSM
Sbjct: 53  CTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSM 112

Query: 230 ISGYFQIGENDEAHRLFDKMCREE-IKLGVVTFNILIRSYNQLG--------------QC 274
           IS Y +IG    A   F++      ++    TF  +IR+   L               +C
Sbjct: 113 ISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDDGRKVHCLVLKLGFEC 172

Query: 275 DV--AMEMVKRMESLGITP------------DVFTWTCMISGFAQNGRTSQALDLFKEMS 320
           DV  A   +      G               D+ TW  MISGF  NG+ ++AL++F EM 
Sbjct: 173 DVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMR 232

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
           F  V  + VTI+S +  C  L  +  G+ IH  A+K+G   D+ V N+LINMY+K  EL 
Sbjct: 233 FKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELR 292

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
           +AE +F+ +K +D+ SWNS++A + Q      A  ++ KM    V P+++T   L S   
Sbjct: 293 SAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAA 352

Query: 441 QNGN-----------------------EDEAVDLFQRMGKNDKVK--------RNTASWN 469
           + GN                        +  +D++ ++G  D  +        ++  SWN
Sbjct: 353 ELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWN 412

Query: 470 SLIAGYQQLGQKNNALGVFRKMQ-SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           SLI GY Q G  N A+ V+  M+  S   PN  T +S+L A + L A  +  + HG +++
Sbjct: 413 SLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIK 472

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
             L   + V   L+D Y K G +  + ++F  +  +  ++WN++I  + LHG+   A+ L
Sbjct: 473 NFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKL 532

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F +M+S G+KP+  TF+S++ A S +G+VD G+  F  + E Y I P ++HY  M+DL+G
Sbjct: 533 FKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFG 592

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+G LE+A  F+++MP+ PD S+W ALL ACRIH N++L     + L  +E  +V    L
Sbjct: 593 RAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKVESENVGYYVL 652

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  IYA  G  E   +VR L R+   + + G   IEV   +  F TG  +    + +YS 
Sbjct: 653 LSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQTHPKCEEIYSE 712

Query: 769 LQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTI 819
           L+    N+TA+    G           +E++EKE I   HSE+LA+AF +I S+    T+
Sbjct: 713 LR----NLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGII-STPPKTTL 767

Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +I KN+R+C  CH   K++S +   EI + DS   HHFK+G CSCGDYW
Sbjct: 768 QIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/581 (26%), Positives = 277/581 (47%), Gaps = 84/581 (14%)

Query: 73  IHLARKLHAFLNLVTEID-VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGA 131
           +HLA++LHA L +  +   +F+  KL++ YA  G +  AR  F+ ++ +++YTW++MI A
Sbjct: 56  VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115

Query: 132 YSRDQRWREVVELFF-LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSC 190
           Y+R   +   V+ F   +    L  D + FP +++ACGN  D   G+ +H LV+KLG  C
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLGFEC 172

Query: 191 VRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC 250
              +  S +  Y + G +  A   F++M  +D   WN+MISG++  G+  EA  +FD+M 
Sbjct: 173 DVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMR 232

Query: 251 REEIKLGVVTF-----------------------------------NILIRSYNQLGQCD 275
            + + +  VT                                    N LI  Y + G+  
Sbjct: 233 FKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELR 292

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            A  +  +M+      D+ +W  +++ F QN +   AL ++ +M  +GV+P+ +T+ S  
Sbjct: 293 SAETIFNQMK----VRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLA 348

Query: 336 SACTDLKALAMGMEIHSLAVKM-GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           S   +L        IH    +   F  D+ +GN++I+MY+K   +++A +VF+ +  KDV
Sbjct: 349 SVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDV 408

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQ-ESDVPPNVITWNVLISGYIQNGNEDEA----- 448
            SWNS+I GY Q G   +A +++  M+  S   PN  TW  +++ + Q G   +      
Sbjct: 409 ISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHG 468

Query: 449 -----------------VDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNN 483
                            VD++ + GK         +   +++ SWN++I+ +   G    
Sbjct: 469 QLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLK 528

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL----RRSLESSLPVMN 539
           A+ +F++MQS    P+ +T +S+L AC++   S  V E   C         +  SL    
Sbjct: 529 AVKLFKEMQSEGVKPDHITFVSLLSACSH---SGLVDEGQWCFQLMQETYGIRPSLKHYG 585

Query: 540 SLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLH 579
            ++D + ++G++  +      M  + D+  W +L+    +H
Sbjct: 586 CMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIH 626



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 237/514 (46%), Gaps = 49/514 (9%)

Query: 36  GRLNEAITVLDS-IATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           G  + A+   +  ++T   +    T+  +++AC    ++   RK+H   L L  E DV++
Sbjct: 120 GHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFECDVYI 176

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
               +  Y++ G +  A  +F++M  R++ TW+AMI  +  + +  E +E+F  M    +
Sbjct: 177 AASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSV 236

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             D      +L  C    D  +G L+H   IKLG+     V N+++ +Y K G+L  A  
Sbjct: 237 SMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAET 296

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------ 261
            F  M  +D V+WNS+++ + Q  +   A  +++KM    +   ++T             
Sbjct: 297 IFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGN 356

Query: 262 ------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                   N +I  Y +LG  D A    K  E L +  DV +W 
Sbjct: 357 FLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSAR---KVFEGLPVK-DVISWN 412

Query: 298 CMISGFAQNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
            +I+G++QNG  ++A+D++  M +  G +PN  T  S ++A + L AL  GM+ H   +K
Sbjct: 413 SLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIK 472

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
                D+ V   L++MY KC +L  A  +F  +  +   SWN++I+ +   GY  KA +L
Sbjct: 473 NFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKL 532

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F +MQ   V P+ IT+  L+S    +G  DE    FQ M +   ++ +   +  ++  + 
Sbjct: 533 FKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFG 592

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           + G    A    + M      P+     ++L AC
Sbjct: 593 RAGHLEKAFNFVKNMPVR---PDVSVWGALLGAC 623



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 204/429 (47%), Gaps = 49/429 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG++ EA+ V D +  +   +   T  +LL  C+  + I     +H + + L  E D+FV
Sbjct: 218 NGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFV 277

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+++YAK G L  A  +F  M+ R++ +W++++ A+ ++++    + ++  M   G+
Sbjct: 278 CNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGV 337

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLV---------IKLGMSCVRRVRNSVLAVYVK 204
            PD      +       G+F + + +H  V         I LG        N+++ +Y K
Sbjct: 338 VPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALG--------NAIIDMYAK 389

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV----T 260
            G +  AR+ FE +  KD ++WNS+I+GY Q G  +EA  ++  M       G V    T
Sbjct: 390 LGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSM---RYYSGAVPNQGT 446

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
           +  ++ +++QLG     M+   ++    +  D+F  TC++  + + G+ + AL LF E  
Sbjct: 447 WVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYE-- 504

Query: 321 FVGVMPNGVTIT-SAISAC-----TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
               +P+  +++ +AI +C       LKA+ +  E+ S  VK     D +   SL++  S
Sbjct: 505 ----VPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVK----PDHITFVSLLSACS 556

Query: 375 KCEELEAAERVFDMIKD-----KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
               ++  +  F ++++       +  +  M+  + +AG+  KA+     M    V P+V
Sbjct: 557 HSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMP---VRPDV 613

Query: 430 ITWNVLISG 438
             W  L+  
Sbjct: 614 SVWGALLGA 622



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 14/189 (7%)

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
           Y    +  K++H  ++      S+ +   LI+ YA  G+I ++R  FD + +KD+ TWNS
Sbjct: 52  YCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNS 111

Query: 572 LICGYVLHGFWHAALDLFDQMKSFG-LKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT-- 628
           +I  Y   G +HAA+D F++  S   L+ +  TF  +I A    G +D G+KV C +   
Sbjct: 112 MISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRA---CGNLDDGRKVHCLVLKL 168

Query: 629 --ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
             EC   I      ++ I  Y R G +  A    ++M I  D   W A+++   ++G + 
Sbjct: 169 GFECDVYIA-----ASFIHFYSRFGFVSLACNLFDNMMIR-DIGTWNAMISGFYLNGKVA 222

Query: 687 LAVLAIERL 695
            A+   + +
Sbjct: 223 EALEVFDEM 231


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 266/884 (30%), Positives = 438/884 (49%), Gaps = 91/884 (10%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           + T + +L  C +SNS+     +H+  + L  + D+++   LLS+YAK   +  AR +F+
Sbjct: 15  QETCLRVLSFC-NSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFD 73

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
           +M  R++ +W+ ++ ++++ +   + ++LF +M+  G +P++F     L++C   G+FE 
Sbjct: 74  EMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFER 133

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG-------KLIWARRFFESMDEKDGVAWNS 228
           G  +H   +KLG+   R V  S++  Y KCG       KL+   +     D  D V+W +
Sbjct: 134 GMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVK-----DGGDVVSWTT 188

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------NILIRSYNQLGQCDVAM-- 278
           M+S   + G+  EA  ++ KM    +     TF        + L  SY +L    + M  
Sbjct: 189 MLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFG 248

Query: 279 -------------------EMVKRMESLGITP--DVFTWTCMISGFAQNGRTSQALDLFK 317
                               MV  ++   +TP  DV+ WT +ISGF QN +  +A+ +F+
Sbjct: 249 AELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFR 308

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
           +M   G++PN  T +S ++A + + +L +G + HS  + +G  DD+ +GN+L++MY KC 
Sbjct: 309 DMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCS 368

Query: 378 ELEA-AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN--- 433
            +   A +VF  I   +V  W S+IAG+ +      +++LF +MQ + V PN  T +   
Sbjct: 369 HITTNAVKVFREITSPNVMCWTSLIAGFAEK-RLEDSFQLFAEMQAAGVRPNSFTMSAIL 427

Query: 434 ------------VLISGYIQNGNED-------EAVDLFQRMGKNDKV--------KRNTA 466
                       +++ G+I     D         VD +  +G  D+          R++ 
Sbjct: 428 GACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSI 487

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           ++  L A   Q G    AL V   M +     +  ++ S L A A L      K++H   
Sbjct: 488 TYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYS 547

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           ++   +    V NSL+  Y+K G+I  +   F  +S  D  +WN LI G+  +G    AL
Sbjct: 548 VKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISHAL 607

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
             FD M+  G+KP+  T LS+I A S  G+++LG + F S+ + Y I P ++HY  ++DL
Sbjct: 608 STFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDL 667

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GR G+LEEAM  IE M  +PDS I + LL AC +HGN+ L      R  +L+P D  I 
Sbjct: 668 LGRGGRLEEAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLELDPSDPAIY 727

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
            L+  +Y   G  +   K R+L RE   R S GQCW+E+++ V+ F  G   +   D + 
Sbjct: 728 LLLANLYDNAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVHHFSAG--EKINEDEIT 785

Query: 767 SWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT--IRIVKN 824
             L+ +      R         + ++ E    H E+LA+AF ++    AP T  IRI KN
Sbjct: 786 EKLEFLITEFRNRRY-------QYQENEDKFYHPEQLAVAFGVL---NAPSTSPIRIYKN 835

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             +C HCH      + +   EI + D K  H FK+GQCSC D +
Sbjct: 836 SLICSHCHTFIMLSTQVIGREIIMRDRKRFHFFKDGQCSCRDIF 879



 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 132/520 (25%), Positives = 234/520 (45%), Gaps = 43/520 (8%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV 86
           T L  L  NG+  EA  +   +   G      T++ LL A      +   + LHA L + 
Sbjct: 188 TMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMF 247

Query: 87  -TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
             E+++ +KT ++ +Y+KC  + DA +V     E ++Y W+ +I  ++++ + RE + +F
Sbjct: 248 GAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVF 307

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M   GL P++F +  +L A  +    + G+  HS VI +G+     + N+++ +Y+KC
Sbjct: 308 RDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKC 367

Query: 206 GKLIW-ARRFFESMDEKDGVAWNSMISGY--------FQ--------------------I 236
             +   A + F  +   + + W S+I+G+        FQ                    +
Sbjct: 368 SHITTNAVKVFREITSPNVMCWTSLIAGFAEKRLEDSFQLFAEMQAAGVRPNSFTMSAIL 427

Query: 237 GENDEAHRLFDKM------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT 290
           G   +   L   M       + ++ + +   N L+ +Y  +G  D A  ++  M      
Sbjct: 428 GACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMN----L 483

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
            D  T+TC+ +   Q G    AL +   M   G+  +  ++ S +SA   L  +  G ++
Sbjct: 484 RDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQL 543

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H  +VK GF     V NSL+++YSKC  +  A R F  I + D +SWN +I+G+   G  
Sbjct: 544 HCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLI 603

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
             A   F  M+ + V P+ IT   LIS     G  +  ++ F  M K   +      +  
Sbjct: 604 SHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMC 663

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           L+    + G+   A+GV  KM    F P+ +   ++L AC
Sbjct: 664 LVDLLGRGGRLEEAMGVIEKMS---FKPDSLICKTLLNAC 700


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 270/855 (31%), Positives = 417/855 (48%), Gaps = 103/855 (12%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A+++F++   R++ +WSA+I AYSR   + +   LF  M+ +GL P+ F    +L+   +
Sbjct: 74  AQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCS 133

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE--SMDEKDGVAWN 227
            G+    + +H   I+ G      +R + + +Y +CG L  A+R F+  S+   D + WN
Sbjct: 134 TGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWN 193

Query: 228 SMISGYFQIGENDEAHRLFDKMCR----------------------EE----------IK 255
           S+I+ Y   G   E  RLF KM                        EE          IK
Sbjct: 194 SIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIK 253

Query: 256 LGVVTFNI---LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
            G+   N+   L+  Y + G    A ++ +R+       DV +W  MI+   Q G    A
Sbjct: 254 AGLEATNLWNSLVTFYGKCGNLQHASQLFERISR----KDVVSWNAMIAANEQRGEGENA 309

Query: 313 LDLFKEMSFV--GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI 370
           L LF+ M  V   V PN VT  S +SA + L AL  G EIH+   ++    D  + NSLI
Sbjct: 310 LGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSLI 369

Query: 371 NMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
             YSKC E+  A  +F+ +  +D+ SWNSM+AGY Q    G+ +++F +M  S + P+  
Sbjct: 370 TFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSH 429

Query: 431 TWNVL-------------------ISGYIQNGNEDEAVDL------------FQRMGKND 459
           +  ++                   I GYI        V L            F R+   +
Sbjct: 430 SLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAE 489

Query: 460 KV-----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV 514
           K+      R++ SWN+++ GY +  +  + L +F  +    F  + V++  +L +C  LV
Sbjct: 490 KIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLV 549

Query: 515 ASNKVKEIHGCVLR-------RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
           +    K+ H  V +          +S L + N+LI  Y+K G+I  +  +F  M  KD+ 
Sbjct: 550 SLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVF 609

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
           +W ++I G   HG    AL LF++MK+ G+KPN+ TFL++++A +  G+V  G   F S+
Sbjct: 610 SWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSM 669

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE-----DMPIEPDS-SIWEALLTACRI 681
              Y + P IEHY+ MIDL+GRSG+ + A   +E       P   D  ++W+ LL AC  
Sbjct: 670 YNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHA 729

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
              +DL V A  ++ +LEP D     L+  +YA  G  EDA+KVRK  R+   R   G  
Sbjct: 730 SKQLDLGVEAATKILELEPEDEATYILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCS 789

Query: 742 WIEVKNLVYTFVTGG--------WSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKE 793
           WI+  N  + FV G           E  + L YS  +     +T    H    ++E EKE
Sbjct: 790 WIDTGNRRHVFVAGDVYHPQRKEIYEKLAQLNYSCRRMGYVPMTELVLHD---VDETEKE 846

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
            I G HSEKLA++F L+        IR++KN+R+C  CH   K+ S++   EI L DS+ 
Sbjct: 847 AILGCHSEKLAVSFGLLNCGVGNGVIRVMKNLRVCEDCHSWMKFASLLEKREILLRDSQR 906

Query: 854 LHHFKNGQCSCGDYW 868
            H F++G CSCGDYW
Sbjct: 907 FHLFRDGSCSCGDYW 921



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 145/569 (25%), Positives = 259/569 (45%), Gaps = 101/569 (17%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDV 91
           CGN    +A  +   +  +G +    +  +LL+    +  I L R+LH + +     +D 
Sbjct: 99  CGN--FAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDS 156

Query: 92  FVKTKLLSVYAKCGCLDDAREVFED--MRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
            ++   +++Y++CG L+DA+ VF++  +   ++  W+++I AY     W EV+ LF  MV
Sbjct: 157 GIRAAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMV 216

Query: 150 QDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
             G+  P +  +  ++ ACG+ G+ + G ++H  +IK G+     + NS++  Y KCG L
Sbjct: 217 SVGVVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEAT-NLWNSLVTFYGKCGNL 275

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE--IKLGVVTF----- 261
             A + FE +  KD V+WN+MI+   Q GE + A  LF +M + E  ++   VTF     
Sbjct: 276 QHASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLS 335

Query: 262 ------------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITP 291
                                         N LI  Y++  +   A E+ +R+    +  
Sbjct: 336 AVSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCREVGKAREIFERL----LLR 391

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC----TDLKALAMG 347
           D+ +W  M++G+ QN +  +  D+FK M   G+ P+  ++T   +A     + L     G
Sbjct: 392 DIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRG 451

Query: 348 MEIHSLAVKMGFTDDV--LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
            EIH   ++      V   V N+++ MY+K   +  AE++F  +K++D YSWN+M+ GY 
Sbjct: 452 KEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGYS 511

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITW--------------------------------- 432
           +         +F+ + +   P + ++                                  
Sbjct: 512 RNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDCP 571

Query: 433 ---------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
                    N LIS Y + G+  +A  +F +M + D       SW ++I G    G    
Sbjct: 572 HQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKD-----VFSWTAMITGCAHHGLAVE 626

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAY 512
           AL +F +M++    PN VT L++L ACA+
Sbjct: 627 ALQLFERMKTDGIKPNQVTFLALLMACAH 655



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 152/591 (25%), Positives = 263/591 (44%), Gaps = 96/591 (16%)

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           +L  A++ F++   +D ++W+++I+ Y + G   +A  LF KM  E ++    +   L++
Sbjct: 70  RLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLK 129

Query: 267 ---SYNQLGQCDV----------------------------AMEMVKRM--ESLGITPDV 293
              S  ++G C                               +E  +R+  E+  +  D+
Sbjct: 130 VSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDI 189

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVM-PNGVTITSAISACTDLKALAMGMEIHS 352
             W  +I+ +  +G   + L LF +M  VGV+ P  +T  S ++AC        G  +H 
Sbjct: 190 LLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMVHG 249

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
             +K G     L  NSL+  Y KC  L+ A ++F+ I  KDV SWN+MIA   Q G    
Sbjct: 250 RIIKAGLEATNL-WNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRGEGEN 308

Query: 413 AYELFIKMQESDVP--PNVITW-----------------------------------NVL 435
           A  LF +M + + P  PN +T+                                   N L
Sbjct: 309 ALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSITNSL 368

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           I+ Y +     +A ++F+R+     + R+  SWNS++AGY+Q  Q+     +F++M  S 
Sbjct: 369 ITFYSKCREVGKAREIFERL-----LLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSG 423

Query: 496 FYPNCVTILSVLPACAY----LVASNKVKEIHGCVLRRSLES--SLPVMNSLIDTYAKSG 549
             P+  ++  +  A +     L+   + KEIHG +LRR      SL V N+++  YAK  
Sbjct: 424 IEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFN 483

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
            I  +  IF GM ++D  +WN+++ GY  +  +   L +F  +   G  P     LSI+L
Sbjct: 484 RIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGF-PLDHVSLSILL 542

Query: 610 AHSLAGMV--DLGKKVFCSIT------ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
             S   +V   LGK+    +       +C     ++   +A+I +Y + G +++A +   
Sbjct: 543 T-SCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQVFL 601

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD--LEPGDVLIQRLIL 710
            M    D   W A++T C  HG    A+   ER+    ++P  V    L++
Sbjct: 602 KME-RKDVFSWTAMITGCAHHGLAVEALQLFERMKTDGIKPNQVTFLALLM 651



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 164/334 (49%), Gaps = 17/334 (5%)

Query: 76  ARKLHAF-LNLVTE--IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY 132
            +++H + L  +T   + + V   +L +YAK   + DA ++F+ M+ R+ Y+W+AM+  Y
Sbjct: 451 GKEIHGYILRRITPGGVSLSVSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGY 510

Query: 133 SRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL--GMSC 190
           SR+ ++ +V+ +F  +++ G   D      +L +CG     + GK  H++V KL  G  C
Sbjct: 511 SRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKLFNGQDC 570

Query: 191 VRR-----VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRL 245
             +     + N+++++Y KCG +  A + F  M+ KD  +W +MI+G    G   EA +L
Sbjct: 571 PHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQL 630

Query: 246 FDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFA 304
           F++M  + IK   VTF  L+ +    G           M    G++P +  + CMI  F 
Sbjct: 631 FERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLFG 690

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITS----AISACTDLKALAMGMEIHSLAVKMGFT 360
           ++G+  +A  L  E       P    I +     + AC   K L +G+E  +  +++   
Sbjct: 691 RSGQFDRAKSLV-EFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPE 749

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           D+      L N+Y+     E A +V   ++DK +
Sbjct: 750 DEATY-ILLANLYASSGLWEDAIKVRKAMRDKGL 782



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 158/341 (46%), Gaps = 40/341 (11%)

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT-- 431
           S+ E L+ A+++FD   ++DV SW+++IA Y + G   +A+ LF KM    + PN  +  
Sbjct: 66  SEHERLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLA 125

Query: 432 --------------------WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR-------- 463
                               W++     + +G     + ++ R G  +  +R        
Sbjct: 126 SLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLL 185

Query: 464 --NTASWNSLIAGYQQLGQKNNALGVFRKMQS-SCFYPNCVTILSVLPACAYLVASNKVK 520
             +   WNS+IA Y   G     L +F KM S     P  +T  SV+ AC          
Sbjct: 186 ALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGA 245

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
            +HG +++  LE++  + NSL+  Y K GN+ ++  +F+ +S KD+++WN++I      G
Sbjct: 246 MVHGRIIKAGLEAT-NLWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRG 304

Query: 581 FWHAALDLFDQMKSF--GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE-CYQIIPMI 637
               AL LF +M      ++PNR TFLS++ A S    +  G+++   I     ++   I
Sbjct: 305 EGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSI 364

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            +  ++I  Y +  ++ +A E  E + +  D   W ++L  
Sbjct: 365 TN--SLITFYSKCREVGKAREIFERLLLR-DIISWNSMLAG 402



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 125/267 (46%), Gaps = 7/267 (2%)

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
           S ++ + +E E +   Q++  N    R+  SW++LIA Y + G    A G+F+KM     
Sbjct: 59  SKFLVSQSEHERLKCAQQLFDNFP-NRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGL 117

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            PN  ++ S+L            +++HG  +R        +  + I  Y++ G +  ++ 
Sbjct: 118 QPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQR 177

Query: 557 IFDGMS--SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG-LKPNRGTFLSIILAHSL 613
           +FD  S  + DI+ WNS+I  Y+ HG W   L LF +M S G + P   T+ S++ A   
Sbjct: 178 VFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGS 237

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           +G    G  V   I +    +     +++++  YG+ G L+ A +  E +    D   W 
Sbjct: 238 SGEEKYGAMVHGRIIKAG--LEATNLWNSLVTFYGKCGNLQHASQLFERIS-RKDVVSWN 294

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEP 700
           A++ A    G  + A+    R+  +EP
Sbjct: 295 AMIAANEQRGEGENALGLFRRMLKVEP 321


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  394 bits (1013), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 257/783 (32%), Positives = 395/783 (50%), Gaps = 78/783 (9%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           TK +S + + G  D A  VF+ M  RN  +++AMI  Y R+ ++    +LF  M    LF
Sbjct: 37  TKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLF 96

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
             + +     +   N    +A  L  S+  K  +S      N++L+ YV+ G +  AR  
Sbjct: 97  SWNLMLTGYAR---NRRLRDARMLFDSMPEKDVVSW-----NAMLSGYVRSGHVDEARDV 148

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F+ M  K+ ++WN +++ Y + G  +EA RLF+     E+    ++ N L+  Y +    
Sbjct: 149 FDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWEL----ISCNCLMGGYVKRNML 204

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
             A ++  ++       D+ +W  MISG+AQ+G  SQA  LF+E                
Sbjct: 205 GDARQLFDQIP----VRDLISWNTMISGYAQDGDLSQARRLFEESP-------------- 246

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
                                      DV    +++  Y +   L+ A RVFD +  K  
Sbjct: 247 -------------------------VRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKRE 281

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQR 454
            S+N MIAGY Q        ELF +M      PN+ +WN++ISGY QNG+  +A +LF  
Sbjct: 282 MSYNVMIAGYAQYKRMDMGRELFEEMPF----PNIGSWNIMISGYCQNGDLAQARNLFDM 337

Query: 455 MGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV 514
           M + D V     SW ++IAGY Q G    A+ +  +M+      N  T    L ACA + 
Sbjct: 338 MPQRDSV-----SWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIA 392

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
           A    K++HG V+R   E    V N+L+  Y K G I  +  +F G+  KDI++WN+++ 
Sbjct: 393 ALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLA 452

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
           GY  HGF   AL +F+ M + G+KP+  T + ++ A S  G+ D G + F S+ + Y I 
Sbjct: 453 GYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGIT 512

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER 694
           P  +HY+ MIDL GR+G LEEA   I +MP EPD++ W ALL A RIHGN++L   A E 
Sbjct: 513 PNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEM 572

Query: 695 LFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           +F +EP +  +  L+  +YA  G+  D  K+R   R+   + + G  W+EV+N ++TF  
Sbjct: 573 VFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTV 632

Query: 755 GGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLAL 805
           G         +Y++L    E +  +  H G           +EEEEK+ +   HSEKLA+
Sbjct: 633 GDCFHPEKGRIYAFL----EELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAV 688

Query: 806 AFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCG 865
           AF ++ +  +   IR++KN+R+C  CH   K++S +    I + DS   HHF  G CSC 
Sbjct: 689 AFGIL-TMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSEGICSCR 747

Query: 866 DYW 868
           DYW
Sbjct: 748 DYW 750



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 153/573 (26%), Positives = 253/573 (44%), Gaps = 93/573 (16%)

Query: 8   TFQQLHSLL------TKKSNPRFRDTH-------LDFLCGNGRLNEAITVLDSIATQGAK 54
             +QLHS +      T    P F D H       +     NG  + A+ V D++  + + 
Sbjct: 6   NLRQLHSSIFHVQRPTNYPKPHFEDPHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSV 65

Query: 55  VRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVF 114
               +Y  ++   + +    LAR L    + +   D+F    +L+ YA+   L DAR +F
Sbjct: 66  ----SYNAMISGYLRNAKFSLARDL---FDKMPHKDLFSWNLMLTGYARNRRLRDARMLF 118

Query: 115 EDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE 174
           + M E+++ +W+AM+  Y R     E  ++F  M       +   +  +L A    G  E
Sbjct: 119 DSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHK----NSISWNGLLAAYVRSGRLE 174

Query: 175 AGK----------------LMHSLVIKLGMSCVRR------VR-----NSVLAVYVKCGK 207
             +                LM   V +  +   R+      VR     N++++ Y + G 
Sbjct: 175 EARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMISGYAQDGD 234

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           L  ARR FE    +D   W +M+  Y Q G  DEA R+FD+M ++      +++N++I  
Sbjct: 235 LSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEMPQKR----EMSYNVMIAG 290

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS------- 320
           Y Q  + D+  E+ + M      P++ +W  MISG+ QNG  +QA +LF  M        
Sbjct: 291 YAQYKRMDMGRELFEEMP----FPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSW 346

Query: 321 ---FVGVMPNGV---------------------TITSAISACTDLKALAMGMEIHSLAVK 356
                G   NG+                     T   A+SAC D+ AL +G ++H   V+
Sbjct: 347 AAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVR 406

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G+    LVGN+L+ MY KC  ++ A  VF  ++ KD+ SWN+M+AGY + G+  +A  +
Sbjct: 407 TGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTV 466

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F  M  + V P+ IT   ++S     G  D   + F  M K+  +  N+  +  +I    
Sbjct: 467 FESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLG 526

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           + G    A  + R M    F P+  T  ++L A
Sbjct: 527 RAGCLEEAQNLIRNMP---FEPDAATWGALLGA 556



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 170/396 (42%), Gaps = 91/396 (22%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DVF  T ++  Y + G LD+AR VF++M ++   +++ MI  Y++ +R     ELF    
Sbjct: 249 DVFTWTAMVYAYVQDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELF---- 304

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
                 ++  FP       N G +                      N +++ Y + G L 
Sbjct: 305 ------EEMPFP-------NIGSW----------------------NIMISGYCQNGDLA 329

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------- 261
            AR  F+ M ++D V+W ++I+GY Q G  +EA  +  +M R+   L   TF        
Sbjct: 330 QARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACA 389

Query: 262 ---------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                                      N L+  Y + G  D A ++ + ++      D+ 
Sbjct: 390 DIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQH----KDIV 445

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSL 353
           +W  M++G+A++G   QAL +F+ M   GV P+ +T+   +SAC+       G E  HS+
Sbjct: 446 SWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHTGLTDRGTEYFHSM 505

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWNSM-----IAGYCQA 407
               G T +      +I++  +   LE A+ +  +M  + D  +W ++     I G  + 
Sbjct: 506 NKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGALLGASRIHGNMEL 565

Query: 408 GYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
           G   +A E+  KM+    P N   + +L + Y  +G
Sbjct: 566 GE--QAAEMVFKME----PHNSGMYVLLSNLYAASG 595



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 131/273 (47%), Gaps = 17/273 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG   EA+ +L  +   G  + R+T+   L AC D  ++ L +++H   +    E    V
Sbjct: 356 NGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLV 415

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y KCGC+D+A +VF+ ++ +++ +W+ M+  Y+R    R+ + +F  M+  G+
Sbjct: 416 GNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGV 475

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD+     +L AC + G  + G +  HS+    G++   +    ++ +  + G L  A+
Sbjct: 476 KPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQ 535

Query: 213 RFFESMD-EKDGVAWNSM-----ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
               +M  E D   W ++     I G  ++GE  +A  +  KM      + V+  N+   
Sbjct: 536 NLIRNMPFEPDAATWGALLGASRIHGNMELGE--QAAEMVFKMEPHNSGMYVLLSNL--- 590

Query: 267 SYNQLGQCDVAMEMVKRMESLGI--TPDVFTWT 297
            Y   G+     +M  +M  +G+  TP  ++W 
Sbjct: 591 -YAASGRWVDVSKMRLKMRQIGVQKTPG-YSWV 621


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 255/866 (29%), Positives = 429/866 (49%), Gaps = 90/866 (10%)

Query: 79  LHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRW 138
           LHA L L +     ++  L+S Y+KC     AR VF+++ +    +WS+++ AYS +   
Sbjct: 26  LHANL-LKSGFLASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLP 84

Query: 139 REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV 198
           R  ++ F  M  +G+  ++F  P +L+      D + G  +H++ +  G      V N++
Sbjct: 85  RSAIQAFHGMRAEGVCCNEFALPVVLKCVP---DAQLGAQVHAMAMATGFGSDVFVANAL 141

Query: 199 LAVYVKCGKLIWARRFF-ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI--- 254
           +A+Y   G +  ARR F E+  E++ V+WN ++S Y +  +  +A ++F +M    I   
Sbjct: 142 VAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPT 201

Query: 255 ----------------------------KLG----VVTFNILIRSYNQLGQCDVAMEMVK 282
                                       ++G    V T N L+  Y ++G+ D+A  + +
Sbjct: 202 EFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFE 261

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
           +M       DV +W  +ISG   NG   +A++L  +M   G++PN   ++S + AC    
Sbjct: 262 KMPD----SDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 317

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           A  +G +IH   +K     D  +G  L++MY+K   L+ A +VFD +  +D+  WN++I+
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 377

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITW------------------------------ 432
           G    G   +A+ +F  +++  +  N  T                               
Sbjct: 378 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 437

Query: 433 -----NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
                N LI  Y +     +A+ +F+     D +     +  S+I    Q      A+ +
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDII-----AVTSMITALSQCDHGEGAIKL 492

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           F +M      P+   + S+L ACA L A  + K++H  +++R   S     N+L+ TYAK
Sbjct: 493 FMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAK 552

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G+I  +   F  +  + +++W+++I G   HG    AL+LF +M   G+ PN  T  S+
Sbjct: 553 CGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSV 612

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           + A + AG+VD  K+ F S+ E + I    EHYS MIDL GR+GKL++AME +  MP + 
Sbjct: 613 LCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQA 672

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           ++S+W ALL A R+H + +L  LA E+LF LEP       L+   YA  G   +  KVRK
Sbjct: 673 NASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRK 732

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCI 787
           L +++  +      W+EVK+ V+TF+ G  S   +  +YS L  + + ++       + +
Sbjct: 733 LMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDV 792

Query: 788 -----EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMH 842
                +  EKE +   HSE+LA+AFAL+ S+     IR+ KN+R+C  CH   K++S + 
Sbjct: 793 DLHDLDRSEKELLLSHHSERLAVAFALL-STPPGAPIRVKKNLRICRDCHMAFKFISNIV 851

Query: 843 HCEIFLADSKCLHHFKNGQCSCGDYW 868
             EI + D    HHF++G CSCGDYW
Sbjct: 852 SREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 223/489 (45%), Gaps = 32/489 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           N +  +AI V   +   G +     +  ++ AC  S +I   R++HA +  +  E DVF 
Sbjct: 180 NDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFT 239

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y K G +D A  +FE M + ++ +W+A+I     +      +EL   M   GL
Sbjct: 240 ANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGL 299

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+ F+   IL+AC   G F+ G+ +H  +IK        +   ++ +Y K   L  A +
Sbjct: 300 VPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMK 359

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M  +D + WN++ISG    G +DEA  +F  + +E + +   T   +++S   L  
Sbjct: 360 VFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEA 419

Query: 274 CDVAMEMVKRMESLGI-------------------------------TPDVFTWTCMISG 302
                ++    E +G                                + D+   T MI+ 
Sbjct: 420 ASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITA 479

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
            +Q      A+ LF EM   G+ P+   ++S ++AC  L A   G ++H+  +K  F  D
Sbjct: 480 LSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSD 539

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
              GN+L+  Y+KC  +E AE  F  + ++ V SW++MI G  Q G+  +A ELF +M +
Sbjct: 540 AFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVD 599

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
             + PN IT   ++      G  DEA   F  M +   + R    ++ +I    + G+ +
Sbjct: 600 EGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLD 659

Query: 483 NALGVFRKM 491
           +A+ +   M
Sbjct: 660 DAMELVNSM 668



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 144/584 (24%), Positives = 260/584 (44%), Gaps = 69/584 (11%)

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +H+ ++K G   +  +RN +++ Y KC +   ARR F+ + +   V+W+S+++ Y  
Sbjct: 23  GAHLHANLLKSGF--LASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80

Query: 236 IGENDEAHRLFDKM-----------------CREEIKLG---------------VVTFNI 263
            G    A + F  M                 C  + +LG               V   N 
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQLGAQVHAMAMATGFGSDVFVANA 140

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+  Y   G  D A  +    +  G   +  +W  ++S + +N +   A+ +F EM + G
Sbjct: 141 LVAMYGGFGFMDDARRV---FDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           + P     +  ++ACT  + +  G ++H++ V+MG+  DV   N+L++MY K   ++ A 
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIAS 257

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL-------- 435
            +F+ + D DV SWN++I+G    G+  +A EL ++M+ S + PNV   + +        
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAG 317

Query: 436 -------ISGYIQNGNEDE----AVDLFQRMGKN----DKVK-------RNTASWNSLIA 473
                  I G++   N D      V L     KN    D +K       R+   WN+LI+
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALIS 377

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
           G    G+ + A  +F  ++      N  T+ +VL + A L A++  +++H    +     
Sbjct: 378 GCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIF 437

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
              V+N LID+Y K   +  +  +F+  SS DII   S+I           A+ LF +M 
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEML 497

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
             GL+P+     S++ A +     + GK+V   + +  Q +      +A++  Y + G +
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK-RQFMSDAFAGNALVYTYAKCGSI 556

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
           E+A      +P E     W A++     HG+   A+    R+ D
Sbjct: 557 EDAELAFSSLP-ERGVVSWSAMIGGLAQHGHGKRALELFGRMVD 599



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 181/398 (45%), Gaps = 44/398 (11%)

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
           M +  TI+  ++     +AL  G  +H+  +K GF   +   N LI+ YSKC     A R
Sbjct: 1   MRSAGTISQQLTRYAAAQALLPGAHLHANLLKSGFLASLR--NHLISFYSKCRRPCCARR 58

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN---------------- 428
           VFD I D    SW+S++  Y   G    A + F  M+   V  N                
Sbjct: 59  VFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQL 118

Query: 429 ----------------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                           V   N L++ Y   G  D+A  +F   G     +RN  SWN L+
Sbjct: 119 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGS----ERNAVSWNGLM 174

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
           + Y +  Q  +A+ VF +M  S   P       V+ AC      +  +++H  V+R   E
Sbjct: 175 SAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYE 234

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
             +   N+L+D Y K G +  +  IF+ M   D+++WN+LI G VL+G  H A++L  QM
Sbjct: 235 KDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY--SAMIDLYGRS 650
           KS GL PN     SI+ A + AG  DLG+++   + +        + Y    ++D+Y ++
Sbjct: 295 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANAD---SDDYIGVGLVDMYAKN 351

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
             L++AM+  + M    D  +W AL++ C   G  D A
Sbjct: 352 HFLDDAMKVFDWMS-HRDLILWNALISGCSHGGRHDEA 388


>gi|242089043|ref|XP_002440354.1| hypothetical protein SORBIDRAFT_09g030130 [Sorghum bicolor]
 gi|241945639|gb|EES18784.1| hypothetical protein SORBIDRAFT_09g030130 [Sorghum bicolor]
          Length = 866

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 235/750 (31%), Positives = 387/750 (51%), Gaps = 40/750 (5%)

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           W+  +   +  + W + +  F  M   G+ PD +   + L ACG  G    G+ +H+   
Sbjct: 151 WNKRVAMLAEAEEWGDAIAAFGEMRARGVAPDGYACARALHACGRAGAPREGQAVHAHAA 210

Query: 185 KLGMSCVRRVRNSVLA-VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
           K G      +    LA +Y +   +  ARR  E+ D    VAWN +++   ++G  D+A 
Sbjct: 211 KAGHVAAHPLVPGFLAGMYAESADVGAARRVLETEDAPP-VAWNVVVACCARLGLVDDAL 269

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
            L ++M R                               R+E   + P + TW  ++SG 
Sbjct: 270 DLAERMARS-----------------------------GRLE---LEPSLATWNAVLSGC 297

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
           A+NGR  +A  + + M   G+ P+  +++S + +   L  LA GME H   ++     DV
Sbjct: 298 ARNGRDREAFGVVRIMLDQGLQPDSSSMSSLLKSVASLGLLAHGMEAHGFFLRNQLEPDV 357

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
             G + ++MY+KC  LE A++VFD ++ +++ +WNS++AGY  AG    A +L  +M+ +
Sbjct: 358 YTGTAFVDMYAKCGHLEYAQKVFDTLELRNITTWNSLVAGYANAGQFDHALDLVEEMKRN 417

Query: 424 DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
            + P+V TWN LI+GY  NG   +AV L +++ K   +  N  SW SLI+G    G   +
Sbjct: 418 RLDPDVTTWNGLINGYSVNGKSSQAVLLLRQI-KAIGLTPNVVSWTSLISGSCNNGDYED 476

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID 543
           +   F +MQ     P+ VT+  +L ACA L    K KE+H   LRR+ +  + V  +LID
Sbjct: 477 SFYFFNEMQKDHVQPSVVTMSVLLRACAGLALLKKGKELHCFALRRAYDRDMVVGTALID 536

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGT 603
            Y+KSGN+  ++ IF+ +   ++++ N+++ G   HG  H A+ LF  M + GLKP+  T
Sbjct: 537 MYSKSGNLASAQRIFERIQENNLVSSNAMLTGLAAHGQGHEAIALFHDMCNSGLKPDSIT 596

Query: 604 FLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
           F +++ A     +V  G + F ++   Y + P +E+Y+ M+DL  R G L+EAM+FI   
Sbjct: 597 FTALLTACRSMDLVTEGWEYFDTMESRYGVTPTVENYACMVDLLARCGYLDEAMDFINKS 656

Query: 664 PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDAL 723
           P +  SS+W ALLT C +HGN+ LA  A  +LF LEP +      ++ +Y      ++A 
Sbjct: 657 PFKSVSSLWGALLTGCTLHGNLALAEAAARKLFKLEPYNSANYLQMVSLYEHEQMFDEAE 716

Query: 724 KVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG-----WSESYSDLLYSWLQNVPENVTA 778
            ++   +        G  WI+++  ++ F   G      +E Y +L+    Q        
Sbjct: 717 SLKYAMKARALDTRPGWSWIQIEQSIHVFEVEGKPHPDTAEIYEELIRLVFQIRKSGYVP 776

Query: 779 RSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
            +S     + EEEKE++   H+EKLA+ + LI S  +   IR++KN RMC  CHE AK++
Sbjct: 777 DTSCIVYNVPEEEKEKLLLSHTEKLAITYGLIHSDASRVPIRVIKNTRMCNDCHELAKHI 836

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S +   +I L D+   H+F +G+CSC + W
Sbjct: 837 SALCARQIILRDADRFHYFTDGKCSCNNCW 866



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 189/344 (54%), Gaps = 7/344 (2%)

Query: 102 AKCGCLDDAREVFEDMR-------ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           A+ G +DDA ++ E M        E +L TW+A++   +R+ R RE   +  +M+  GL 
Sbjct: 260 ARLGLVDDALDLAERMARSGRLELEPSLATWNAVLSGCARNGRDREAFGVVRIMLDQGLQ 319

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD      +L++  + G    G   H   ++  +        + + +Y KCG L +A++ 
Sbjct: 320 PDSSSMSSLLKSVASLGLLAHGMEAHGFFLRNQLEPDVYTGTAFVDMYAKCGHLEYAQKV 379

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F++++ ++   WNS+++GY   G+ D A  L ++M R  +   V T+N LI  Y+  G+ 
Sbjct: 380 FDTLELRNITTWNSLVAGYANAGQFDHALDLVEEMKRNRLDPDVTTWNGLINGYSVNGKS 439

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
             A+ ++++++++G+TP+V +WT +ISG   NG    +   F EM    V P+ VT++  
Sbjct: 440 SQAVLLLRQIKAIGLTPNVVSWTSLISGSCNNGDYEDSFYFFNEMQKDHVQPSVVTMSVL 499

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           + AC  L  L  G E+H  A++  +  D++VG +LI+MYSK   L +A+R+F+ I++ ++
Sbjct: 500 LRACAGLALLKKGKELHCFALRRAYDRDMVVGTALIDMYSKSGNLASAQRIFERIQENNL 559

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
            S N+M+ G    G   +A  LF  M  S + P+ IT+  L++ 
Sbjct: 560 VSSNAMLTGLAAHGQGHEAIALFHDMCNSGLKPDSITFTALLTA 603



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 99/472 (20%), Positives = 198/472 (41%), Gaps = 74/472 (15%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NGR  EA  V+  +  QG +   ++  +LL++      +    + H F L    E DV+ 
Sbjct: 300 NGRDREAFGVVRIMLDQGLQPDSSSMSSLLKSVASLGLLAHGMEAHGFFLRNQLEPDVYT 359

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T  + +YAKCG L+ A++VF+ +  RN+ TW++++  Y+   ++   ++L   M ++ L
Sbjct: 360 GTAFVDMYAKCGHLEYAQKVFDTLELRNITTWNSLVAGYANAGQFDHALDLVEEMKRNRL 419

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD   +  ++      G      L+   +  +G++                        
Sbjct: 420 DPDVTTWNGLINGYSVNGKSSQAVLLLRQIKAIGLT------------------------ 455

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS------ 267
                   + V+W S+ISG    G+ +++   F++M ++ ++  VVT ++L+R+      
Sbjct: 456 -------PNVVSWTSLISGSCNNGDYEDSFYFFNEMQKDHVQPSVVTMSVLLRACAGLAL 508

Query: 268 -----------------------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
                                        Y++ G    A  + +R++      ++ +   
Sbjct: 509 LKKGKELHCFALRRAYDRDMVVGTALIDMYSKSGNLASAQRIFERIQE----NNLVSSNA 564

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKM 357
           M++G A +G+  +A+ LF +M   G+ P+ +T T+ ++AC  +  +  G E   ++  + 
Sbjct: 565 MLTGLAAHGQGHEAIALFHDMCNSGLKPDSITFTALLTACRSMDLVTEGWEYFDTMESRY 624

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS-WNSMIAGYCQAGYCGKAYEL 416
           G T  V     ++++ ++C  L+ A    +    K V S W +++ G    G    A   
Sbjct: 625 GVTPTVENYACMVDLLARCGYLDEAMDFINKSPFKSVSSLWGALLTGCTLHGNLALAEAA 684

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
             K+ + + P N   +  ++S Y      DEA  L   M       R   SW
Sbjct: 685 ARKLFKLE-PYNSANYLQMVSLYEHEQMFDEAESLKYAMKARALDTRPGWSW 735



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 3/203 (1%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDV 91
           C NG   ++    + +     +    T   LL+AC     +   ++LH F L    + D+
Sbjct: 469 CNNGDYEDSFYFFNEMQKDHVQPSVVTMSVLLRACAGLALLKKGKELHCFALRRAYDRDM 528

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            V T L+ +Y+K G L  A+ +FE ++E NL + +AM+   +   +  E + LF  M   
Sbjct: 529 VVGTALIDMYSKSGNLASAQRIFERIQENNLVSSNAMLTGLAAHGQGHEAIALFHDMCNS 588

Query: 152 GLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           GL PD   F  +L AC +      G +   ++  + G++        ++ +  +CG L  
Sbjct: 589 GLKPDSITFTALLTACRSMDLVTEGWEYFDTMESRYGVTPTVENYACMVDLLARCGYLDE 648

Query: 211 ARRFFESMDEKD-GVAWNSMISG 232
           A  F      K     W ++++G
Sbjct: 649 AMDFINKSPFKSVSSLWGALLTG 671


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 278/872 (31%), Positives = 432/872 (49%), Gaps = 106/872 (12%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQAC-IDSNSIHLARKLHAFLNLVTEIDVFVK 94
           GR+ +A  V D     G  VR     N +  C + +  I LARKL    + +   DV   
Sbjct: 109 GRVRDARRVFD-----GMGVRNTVAWNAMVTCYVQNGDITLARKL---FDAMPSRDVSSW 160

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             +L+ Y     +++AR +FE M ERN  +W+ MI  Y   ++     ++F  M+ +G+ 
Sbjct: 161 NTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMT 220

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK-CGKLIWARR 213
           P+      +L A  + G     + +H LV K G      V  ++L  Y K    L  A +
Sbjct: 221 PEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVK 280

Query: 214 FFESMDEKDGVAWN-------------------------------SMISGYFQIGENDEA 242
           FFE M  ++   W+                               SM++G  + G  D+A
Sbjct: 281 FFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDA 340

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
             LFD++        VV++N +I  Y Q    D A ++  RM       +  +W  MI+G
Sbjct: 341 KILFDQIHEPN----VVSWNAMITGYMQNEMVDEAEDLFNRMP----FRNTISWAGMIAG 392

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           +A+NGR+ QAL   + +   G++P+  ++TS+  AC++++AL  G ++HSLAVK G   +
Sbjct: 393 YARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFN 452

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
             V N+LI +Y K   + +  ++FD +  KD  S+NS                       
Sbjct: 453 SYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNS----------------------- 489

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
                        +S  +QN   DEA D+F  M   D V     SW ++I+   Q  Q N
Sbjct: 490 ------------FMSALVQNNLFDEARDVFNNMPSPDVV-----SWTTIISACAQADQGN 532

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
            A+ +FR M      PN   +  +L     L A    ++IH   ++  ++S L V N+L+
Sbjct: 533 EAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALV 592

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
             Y K  +   S  +FD M  +DI TWN++I GY  HG    A+ ++  M S G+ PN  
Sbjct: 593 SMYFKCSS-ADSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEV 651

Query: 603 TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           TF+ ++ A S +G+VD G + F S++  Y + P++EHY+ M+DL GR+G ++ A  FI D
Sbjct: 652 TFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYD 711

Query: 663 MPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDA 722
           MPIEPDS IW ALL AC+IH N+++   A E+LF +EP +     ++  IY+  G  ++ 
Sbjct: 712 MPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEV 771

Query: 723 LKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES-----YSDL--LYSWLQN---V 772
            KVRKL +E       G  W+++KN +++FVTG          Y+ L  LY+ L+    V
Sbjct: 772 AKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTGDEEHEQIQNIYATLWELYTLLKATGYV 831

Query: 773 PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCH 832
           P+  T    H    I+EE+KE     HSEKLA+A+ L+ + +    I+I+KN+R+C  CH
Sbjct: 832 PD--TDFVLHD---IDEEQKESSLLYHSEKLAVAYGLLVTPKG-MPIQIMKNLRICGDCH 885

Query: 833 ETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
              K+VS +   EI + D    HHF+NG CSC
Sbjct: 886 TFIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 156/555 (28%), Positives = 262/555 (47%), Gaps = 86/555 (15%)

Query: 102 AKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFP 161
            + G L +AREVF+ M  R++  W++MI AY                             
Sbjct: 44  GRLGRLHEAREVFDSMPFRDIIAWNSMIFAY----------------------------- 74

Query: 162 KILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK 221
                C N G  +AG+ +   +    +    R    +L+ Y + G++  ARR F+ M  +
Sbjct: 75  -----CNN-GMPDAGRSLADAISGGNL----RTGTILLSGYARAGRVRDARRVFDGMGVR 124

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMV 281
           + VAWN+M++ Y Q G+   A +LFD M   ++     ++N ++  Y      + A  + 
Sbjct: 125 NTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVS----SWNTMLTGYCHSQLMEEARNLF 180

Query: 282 KRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
           +RM E  G+     +WT MISG+    +  +A D+F+ M   G+ P    + S +SA   
Sbjct: 181 ERMPERNGV-----SWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRH 235

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK-CEELEAAERVFDMIKDKDVYSWNS 399
           L    +   IH L  K GF  DV+VG +++N Y+K    L++A + F+ +  ++ Y+W++
Sbjct: 236 LGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWST 295

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVP---------------------------PNVITW 432
           +IA   QAG    A+ ++ +     VP                           PNV++W
Sbjct: 296 IIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSW 355

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           N +I+GY+QN   DEA DLF RM       RNT SW  +IAGY + G+   AL   + + 
Sbjct: 356 NAMITGYMQNEMVDEAEDLFNRMP-----FRNTISWAGMIAGYARNGRSEQALVSLQALH 410

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
                P+  ++ S   AC+ + A    K++H   ++   + +  V N+LI  Y K  +I 
Sbjct: 411 RKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIG 470

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
             R IFD M+ KD +++NS +   V +  +  A D+F+ M S    P+  ++ +II A +
Sbjct: 471 SVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPS----PDVVSWTTIISACA 526

Query: 613 LAGMVDLGKKVFCSI 627
            A   +   ++F S+
Sbjct: 527 QADQGNEAVEIFRSM 541



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 177/395 (44%), Gaps = 42/395 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF------------ 82
           NGR  +A+  L ++  +G     ++  +   AC +  ++   +++H+             
Sbjct: 396 NGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYV 455

Query: 83  --------------------LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
                                + +T  D       +S   +    D+AR+VF +M   ++
Sbjct: 456 CNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDV 515

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            +W+ +I A ++  +  E VE+F  M+ +   P+  +   +L   GN G  + G+ +H++
Sbjct: 516 VSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTI 575

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
            IKLGM     V N+++++Y KC     + + F+SM+E+D   WN++I+GY Q G   EA
Sbjct: 576 AIKLGMDSGLVVANALVSMYFKCSSAD-SLKVFDSMEERDIFTWNTIITGYAQHGLGREA 634

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMIS 301
            R++  M    +    VTF  L+ + +  G  D   +  K M S  G+TP +  + CM+ 
Sbjct: 635 IRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVD 694

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
              + G    A     +M    + P+ V  ++ + AC   K + +G      A K+   +
Sbjct: 695 LLGRAGDVQGAEHFIYDMP---IEPDSVIWSALLGACKIHKNVEIG---RRAAEKLFSIE 748

Query: 362 DVLVGNSLI--NMYSKCEELEAAERVFDMIKDKDV 394
               GN ++  N+YS     +   +V  ++K++ V
Sbjct: 749 PSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGV 783


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 268/770 (34%), Positives = 396/770 (51%), Gaps = 76/770 (9%)

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
           +C      K +H+L++  G      +   ++ +Y   G +  +R  F+ +  KD   WNS
Sbjct: 85  SCTKTLLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNS 144

Query: 229 MISGYFQIGENDEAHRLFDKMCR-EEIKLGVVTFNILIRSYN-------------QLG-Q 273
           MIS Y + G   EA   F ++    + +    TF  ++++               +LG Q
Sbjct: 145 MISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQTLVDGRKIHCWVFKLGFQ 204

Query: 274 CDV-----AMEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEM 319
            DV      + M  R   +GI   +F         +W  MISG  QNG  +QALD+  EM
Sbjct: 205 WDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEM 264

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
              G+  + VT+ S +  C  L  ++    IH   +K G   ++ V N+LINMY+K   L
Sbjct: 265 RLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNL 324

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-- 437
             A++VF  +  +DV SWNS+IA Y Q      A   F KMQ + + P+++T   L S  
Sbjct: 325 GDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIA 384

Query: 438 -------------GYI-QNGNEDEAV-------DLFQRMGKNDKVKR--------NTASW 468
                        G+I + G   EAV       D++ ++G  D   +        +  SW
Sbjct: 385 AQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSW 444

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQS-SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           N+LI+GY Q G  + A+ V+R M+       N  T +S+L A A++ A  +   IHG ++
Sbjct: 445 NTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLI 504

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           + +L   + V   LID Y K G +V +  +F  +  +  + WN++I  + +HG    AL 
Sbjct: 505 KTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALK 564

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           LF +M+  G+KP+  TF+S++ A S +G+VD GK  F  + E Y I P ++HY  M+DL 
Sbjct: 565 LFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQE-YGIKPSLKHYGCMVDLL 623

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           GR+G LE A +FI+DMP+ PD+SIW ALL ACRIHGNI+L   A +RLF+++  +V    
Sbjct: 624 GRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYV 683

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
           L+  IYA  GK E   KVR L RE   + + G   IEV   V  F TG  S      +Y+
Sbjct: 684 LLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTGNQSHPKCKEIYA 743

Query: 768 WLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
            L+     +TA+    G           +EE+EKE I   HSE+LA+AF +I S+     
Sbjct: 744 ELR----ILTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGII-STPPKSA 798

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IRI KN+R+C  CH   K++S +   EI + DSK  HHFKNG CSCGDYW
Sbjct: 799 IRIFKNLRVCGDCHNATKFISRITEREIVVRDSKRFHHFKNGICSCGDYW 848



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 153/596 (25%), Positives = 278/596 (46%), Gaps = 72/596 (12%)

Query: 51  QGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV-FVKTKLLSVYAKCGCLDD 109
           Q AK     + +L  +C  +    LA++LHA L +  +I   F+  +L+++YA  G +  
Sbjct: 70  QPAKNEEIDFNSLFDSCTKT---LLAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSL 126

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL-FPKILQACG 168
           +R  F+ ++ +++YTW++MI AY R+  +RE ++ F+ ++    F  DF  FP +L+AC 
Sbjct: 127 SRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQ 186

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
              D   G+ +H  V KLG      V  S++ +Y + G +  AR  F+ M  +D  +WN+
Sbjct: 187 TLVD---GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNA 243

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA----------- 277
           MISG  Q G   +A  + D+M  E I +  VT   ++    QLG    A           
Sbjct: 244 MISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHG 303

Query: 278 -----------MEMVKRMESLG---------ITPDVFTWTCMISGFAQNGRTSQALDLFK 317
                      + M  +  +LG            DV +W  +I+ + QN     A   F 
Sbjct: 304 LEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFF 363

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF-TDDVLVGNSLINMYSKC 376
           +M   G+ P+ +T+ S  S     +       +H   ++ G+  + V++GN++++MY+K 
Sbjct: 364 KMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKL 423

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE-SDVPPNVITWNVL 435
             +++A +VF++I  KDV SWN++I+GY Q G   +A E++  M+E  ++  N  TW  +
Sbjct: 424 GVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSI 483

Query: 436 ISGYIQNGNEDEA----------------------VDLFQRMGK--------NDKVKRNT 465
           ++ Y   G   +                       +DL+ + G+            + ++
Sbjct: 484 LAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESS 543

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
             WN++I+ +   G    AL +FR+MQ     P+ VT +S+L AC++    ++ K     
Sbjct: 544 VPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHL 603

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
           +    ++ SL     ++D   ++G +  +      M    D   W +L+    +HG
Sbjct: 604 MQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHG 659



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 226/514 (43%), Gaps = 54/514 (10%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  NG   +A+ VLD +  +G  +   T  ++L  C     I  A  +H + +    E +
Sbjct: 248 LIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFE 307

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +FV   L+++YAK G L DA++VF+ M  R++ +W+++I AY ++         FF M  
Sbjct: 308 LFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQL 367

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG--MSCVRRVRNSVLAVYVKCGKL 208
           +GL PD      +        D++  + +H  +++ G  M  V  + N+V+ +Y K G +
Sbjct: 368 NGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAV-VIGNAVMDMYAKLGVI 426

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--CREEIKLGVVTFNILIR 266
             A + F  +  KD V+WN++ISGY Q G   EA  ++  M  CR EIKL   T+  ++ 
Sbjct: 427 DSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECR-EIKLNQGTWVSILA 485

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT----------------- 309
           +Y  +G     M +   +    +  DVF  TC+I  + + GR                  
Sbjct: 486 AYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVP 545

Query: 310 --------------SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
                          +AL LF+EM   GV P+ VT  S +SAC+    +  G     L  
Sbjct: 546 WNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQ 605

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           + G    +     ++++  +   LE A   +D IKD  ++   S+      A       E
Sbjct: 606 EYGIKPSLKHYGCMVDLLGRAGFLEMA---YDFIKDMPLHPDASIWGALLGACRIHGNIE 662

Query: 416 L--FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
           L  F   +  +V    + + VL+S    N  + E VD  + + +   +K+ T  W+S+  
Sbjct: 663 LGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKK-TPGWSSI-- 719

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
                 + N  + +F     S  +P C  I + L
Sbjct: 720 ------EVNRRVDIFYTGNQS--HPKCKEIYAEL 745


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 259/870 (29%), Positives = 428/870 (49%), Gaps = 98/870 (11%)

Query: 79  LHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRW 138
           LHA L     +  F +  L+S Y+KC     AR VF+++ +    +WS+++ AYS +   
Sbjct: 26  LHASLLKSGSLASF-RNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLP 84

Query: 139 REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV 198
           R  ++ F  M  +G+  ++F  P +L+      D   G  +H++ +  G      V N++
Sbjct: 85  RSAIQAFHGMRAEGVCCNEFALPVVLKCVP---DARLGAQVHAMAMATGFGSDVFVANAL 141

Query: 199 LAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI--- 254
           +A+Y   G +  ARR F   D E++ V+WN ++S Y +  +  +A ++F +M    I   
Sbjct: 142 VAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPT 201

Query: 255 ----------------------------KLG----VVTFNILIRSYNQLGQCDVAMEMVK 282
                                       ++G    V T N L+  Y ++G+ D+A  + +
Sbjct: 202 EFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFE 261

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
           +M       DV +W  +ISG   NG   +A++L  +M + G++PN  T++S + AC+   
Sbjct: 262 KMPD----SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           A  +G +IH   +K     D  +G  L++MY+K   L+ A +VFD +  +D+   N++I+
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITW------------------------------ 432
           G    G   +A  LF ++++  +  N  T                               
Sbjct: 378 GCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437

Query: 433 -----NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
                N LI  Y +     +A  +F+     D +     +  S+I    Q      A+ +
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDANRVFEECSSGDII-----ACTSMITALSQCDHGEGAIKL 492

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           F +M      P+   + S+L ACA L A  + K++H  +++R   S     N+L+ TYAK
Sbjct: 493 FMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAK 552

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G+I  +   F  +  + +++W+++I G   HG    AL+LF +M   G+ PN  T  S+
Sbjct: 553 CGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSV 612

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           + A + AG+VD  K+ F S+ E + I    EHYS MIDL GR+GKL++AME +  MP + 
Sbjct: 613 LCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQA 672

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           ++SIW ALL A R+H + +L  LA E+LF LEP       L+   YA  G   +  KVRK
Sbjct: 673 NASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRK 732

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC- 786
           L +++  +      WIEVK+ V+TF+ G  S   +  +Y+ L  + + +    S +G   
Sbjct: 733 LMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLM----SKAGFVP 788

Query: 787 --------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
                   ++  EKE +   HSE+LA+AFAL+ S+     IR+ KN+R+C  CH   K++
Sbjct: 789 NVDVDLHDLDRSEKELLLSHHSERLAVAFALL-STPPGAPIRVKKNLRICRDCHVAFKFI 847

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S +   EI + D    HHF++G CSCGDYW
Sbjct: 848 SKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 222/489 (45%), Gaps = 32/489 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           N +  +AI V   +   G +     +  ++ AC  S +I   R++HA +  +  + DVF 
Sbjct: 180 NDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFT 239

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y K G +D A  +FE M + ++ +W+A+I     +      +EL   M   GL
Sbjct: 240 ANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGL 299

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+ F    IL+AC   G F+ G+ +H  +IK        +   ++ +Y K   L  AR+
Sbjct: 300 VPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARK 359

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M  +D +  N++ISG    G +DEA  LF ++ +E + +   T   +++S   L  
Sbjct: 360 VFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEA 419

Query: 274 CDVAMEMVKRMESLGI-------------------------------TPDVFTWTCMISG 302
                ++      +G                                + D+   T MI+ 
Sbjct: 420 ASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITA 479

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
            +Q      A+ LF EM   G+ P+   ++S ++AC  L A   G ++H+  +K  F  D
Sbjct: 480 LSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSD 539

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
              GN+L+  Y+KC  +E AE  F  + ++ V SW++MI G  Q G+  +A ELF +M +
Sbjct: 540 AFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVD 599

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
             + PN IT   ++      G  DEA   F  M +   + R    ++ +I    + G+ +
Sbjct: 600 EGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLD 659

Query: 483 NALGVFRKM 491
           +A+ +   M
Sbjct: 660 DAMELVNSM 668



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 144/584 (24%), Positives = 260/584 (44%), Gaps = 69/584 (11%)

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +H+ ++K G   +   RN +++ Y KC +   ARR F+ + +   V+W+S+++ Y  
Sbjct: 23  GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80

Query: 236 IGENDEAHRLFDKM-----------------CREEIKLG---------------VVTFNI 263
            G    A + F  M                 C  + +LG               V   N 
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANA 140

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+  Y   G  D A  +    +S     +  +W  ++S + +N +   A+ +F EM + G
Sbjct: 141 LVAMYGGFGFMDDARRVFNEADS---ERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           + P     +  ++ACT  + +  G ++H++ V+MG+  DV   N+L++MY K   ++ A 
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL-------- 435
            +F+ + D DV SWN++I+G    G+  +A EL ++M+ S + PNV T + +        
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317

Query: 436 -------ISGYIQNGNEDE----AVDLFQRMGKNDKV--KRNTASW---------NSLIA 473
                  I G++   N D      V L     KN  +   R    W         N+LI+
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
           G    G+ + AL +F +++      N  T+ +VL + A L A++  +++H   ++     
Sbjct: 378 GCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
              V+N LID+Y K   +  +  +F+  SS DII   S+I           A+ LF +M 
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEML 497

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
             GL+P+     S++ A +     + GK+V   + +  Q +      +A++  Y + G +
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK-RQFMSDAFAGNALVYTYAKCGSI 556

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
           E+A      +P E     W A++     HG+   A+    R+ D
Sbjct: 557 EDAELAFSSLP-ERGVVSWSAMIGGLAQHGHGKRALELFGRMVD 599


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 255/807 (31%), Positives = 389/807 (48%), Gaps = 84/807 (10%)

Query: 137 RWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV--IKLGMSCVRRV 194
           R  ++ E   L+  DG+  DD  +  +LQ C      E GK  H LV    LG   +  V
Sbjct: 73  RSGDLEEALGLLGSDGV--DDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNV 130

Query: 195 RNSVLAV-YVKCGKLIWARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
               L + Y+KCG L  ARR F+ M +  D   W +++SGY + G+  E   LF KM   
Sbjct: 131 LGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCC 190

Query: 253 EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP--------------------- 291
            ++    T + +++    LG  +    +   +E LG                        
Sbjct: 191 GVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDA 250

Query: 292 ----------DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
                     DV +W  MISG   NG   +A++LF  M   G   +  T+ S + AC +L
Sbjct: 251 ILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAEL 310

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
             L +G  +H  +VK GF     + N L++MYS C +  +  ++F  +  K+V SW +MI
Sbjct: 311 HLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMI 370

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVIT------------------------------ 431
             Y +AG   K   LF +M      P++                                
Sbjct: 371 TSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGME 430

Query: 432 -----WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALG 486
                 N L+  Y++ GN +EA  +F  +     V ++  SWN+LI GY +    N A  
Sbjct: 431 KVLAVTNALMEMYVKCGNMEEAKLIFDGV-----VSKDMISWNTLIGGYSRNNLANEAFS 485

Query: 487 VFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
           +F +M      PN VT+  +LPA A L +  + +E+H   LRR       V N+LID Y 
Sbjct: 486 LFTEMLLQ-LRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYV 544

Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
           K G ++ +R +FD +S+K++I+W  ++ GY +HG    A+ LF+QM+  G+ P+  +F +
Sbjct: 545 KCGALLLARRLFDRLSNKNLISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSA 604

Query: 607 IILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
           I+ A S +G+ D G + F ++ + ++I P ++HY+ M+DL   +G L+EA EFI+ MPIE
Sbjct: 605 ILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIE 664

Query: 667 PDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR 726
           PDSSIW +LL  CRIH N+ LA    ER+F+LEP +     L+  IYA   + E   K++
Sbjct: 665 PDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLK 724

Query: 727 KLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP-----ENVTARSS 781
                   R + G  WIE K  V+ F+    +      +  +L  V      E    +  
Sbjct: 725 NKIGGRGLRENTGCSWIEAKGKVHVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKK 784

Query: 782 HSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMM 841
           ++ +  +     E    HS KLA+AF ++  S+    IR+ KN R+C HCHE AK++S M
Sbjct: 785 YALMGADNAVHGEALCGHSSKLAVAFGVLNLSEG-RLIRVTKNSRVCSHCHEAAKFISKM 843

Query: 842 HHCEIFLADSKCLHHFKNGQCSCGDYW 868
              EI L DS   HHF+ G+CSC  YW
Sbjct: 844 CSREIILRDSNRFHHFEQGRCSCRGYW 870



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 171/658 (25%), Positives = 295/658 (44%), Gaps = 95/658 (14%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           + H+  LC +G L EA+ +L S       V   +Y  +LQ C +  S+   ++ H  +  
Sbjct: 65  NLHIQRLCRSGDLEEALGLLGSDG-----VDDRSYGAVLQLCSEVRSLEGGKRAHFLVRA 119

Query: 86  VT----EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWRE 140
            +     +D  +  KL+ +Y KCG L++AR VF++M +  ++  W+A++  Y++    RE
Sbjct: 120 SSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMPQVSDVRVWTALMSGYAKAGDLRE 179

Query: 141 VVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
            V LF  M   G+ PD +    +L+     G  E G+++H L+ KLG      V N+++A
Sbjct: 180 GVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLEKLGFGSQCAVGNALMA 239

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM----------- 249
            Y K  +   A   F+ M  +D ++WNSMISG    G  D+A  LF +M           
Sbjct: 240 FYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSAT 299

Query: 250 -------CRE-------------EIKLGVVT----FNILIRSYNQLGQCDVAMEMVKRME 285
                  C E              +K G ++     N+L+  Y+         ++ + M 
Sbjct: 300 LLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNM- 358

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
              +  +V +WT MI+ + + G   +   LF+EM   G  P+   ITSA+ A    + L 
Sbjct: 359 ---VQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAITSALHAFAGNELLK 415

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
            G  +H  A++ G    + V N+L+ MY KC  +E A+ +FD +  KD+ SWN++I GY 
Sbjct: 416 HGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYS 475

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITW--------------------------------- 432
           +     +A+ LF +M    + PN +T                                  
Sbjct: 476 RNNLANEAFSLFTEML-LQLRPNAVTMTCILPAAASLSSLERGREMHAYALRRGYLEDDF 534

Query: 433 --NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
             N LI  Y++ G    A  LF R+       +N  SW  ++AGY   G+  +A+ +F +
Sbjct: 535 VANALIDMYVKCGALLLARRLFDRLS-----NKNLISWTIMVAGYGMHGRGRDAIALFEQ 589

Query: 491 MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSG 549
           M+ S   P+  +  ++L AC++    ++       + +   +E  L     ++D    +G
Sbjct: 590 MRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHYTCMVDLLINTG 649

Query: 550 NIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFL 605
           N+  +    D M    D   W SL+ G  +H     A ++ +++  F L+P N G ++
Sbjct: 650 NLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERV--FELEPENTGYYV 705


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 264/882 (29%), Positives = 444/882 (50%), Gaps = 89/882 (10%)

Query: 65  QACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE-RNL 122
           +A   S++++  R++HA  ++L  +   F   KL+  Y+       +  VF  +   +N+
Sbjct: 12  RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
           Y W+++I A+S++  + E +E +  + +  + PD + FP +++AC    D E G L++  
Sbjct: 72  YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           ++ +G      V N+++ +Y + G L  AR+ F+ M  +D V+WNS+ISGY   G  +EA
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQL-----GQ-------------------CDVAM 278
             ++ ++    I     T + ++ ++  L     GQ                     VAM
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251

Query: 279 EM-------VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
            +        +R+       D  ++  MI G+ +     +++ +F E +     P+ +T+
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTV 310

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           +S + AC  L+ L++   I++  +K GF  +  V N LI++Y+KC ++  A  VF+ ++ 
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------------- 432
           KD  SWNS+I+GY Q+G   +A +LF  M   +   + IT+                   
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430

Query: 433 ----------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
                           N LI  Y + G   +++ +F  MG  D     T +WN++I+   
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGD-----TVTWNTVISACV 485

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           + G     L V  +M+ S   P+  T L  LP CA L A    KEIH C+LR   ES L 
Sbjct: 486 RFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ 545

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           + N+LI+ Y+K G +  S  +F+ MS +D++TW  +I  Y ++G    AL+ F  M+  G
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSG 605

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           + P+   F++II A S +G+VD G   F  +   Y+I PMIEHY+ ++DL  RS K+ +A
Sbjct: 606 IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKA 665

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
            EFI+ MPI+PD+SIW ++L ACR  G+++ A     R+ +L P D     L    YA  
Sbjct: 666 EEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAAL 725

Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ------ 770
            K +    +RK  ++     + G  WIEV   V+ F +G  S   S+ +Y  L+      
Sbjct: 726 RKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLM 785

Query: 771 ----NVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIR 826
                +P+    R     L  EEE++  I G HSE+LA+AF L+ +++    ++++KN+R
Sbjct: 786 AKEGYIPD---PREVSQNLEEEEEKRRLICG-HSERLAIAFGLL-NTEPGTPLQVMKNLR 840

Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +C  CHE  K +S +   EI + D+   H FK+G CSC D W
Sbjct: 841 VCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 158/648 (24%), Positives = 277/648 (42%), Gaps = 119/648 (18%)

Query: 161 PKILQACGNCGDFEAGKLMHSLVIKLG------------------------MSCVRRVR- 195
           P I +A  +  +    + +H+LVI LG                        +S  RRV  
Sbjct: 8   PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67

Query: 196 -------NSVLAVYVKCGKLIWARRFF----ESMDEKDGVAWNSMISGYFQIGENDEAHR 244
                  NS++  + K G    A  F+    ES    D   + S+I     + + +    
Sbjct: 68  AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127

Query: 245 LFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFA 304
           +++++     +  +   N L+  Y+++G    A ++   M       D+ +W  +ISG++
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMP----VRDLVSWNSLISGYS 183

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
            +G   +AL+++ E+    ++P+  T++S + A  +L  +  G  +H  A+K G    V+
Sbjct: 184 SHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVV 243

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
           V N L+ MY K      A RVFD +  +D  S+N+MI GY +     ++  +F++  +  
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ- 302

Query: 425 VPPNVIT-----------------------------------WNVLISGYIQNGNEDEAV 449
             P+++T                                    N+LI  Y + G+   A 
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           D+F  M   D     T SWNS+I+GY Q G    A+ +F+ M       + +T L ++  
Sbjct: 363 DVFNSMECKD-----TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
              L      K +H   ++  +   L V N+LID YAK G +  S  IF  M + D +TW
Sbjct: 418 STRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTW 477

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL-SIILAHSLAGMVDLGKKVFC--- 625
           N++I   V  G +   L +  QM+   + P+  TFL ++ +  SLA    LGK++ C   
Sbjct: 478 NTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK-RLGKEIHCCLL 536

Query: 626 ------------SITECYQIIPMIEH---------------YSAMIDLYGRSGKLEEAME 658
                       ++ E Y     +E+               ++ MI  YG  G+ E+A+E
Sbjct: 537 RFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALE 596

Query: 659 FIEDMP---IEPDSSIWEALLTACRIHGNIDLAVLAIERL---FDLEP 700
              DM    I PDS ++ A++ AC   G +D  +   E++   + ++P
Sbjct: 597 TFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDP 644


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/618 (35%), Positives = 351/618 (56%), Gaps = 48/618 (7%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           D   W  MI+G  +N     ++ LF+EM   GV  +  T+T+ + A  +L+ L +GM I 
Sbjct: 173 DTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQ 232

Query: 352 SLAVKMGFT--DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
            LA+K+GF   D VL G  LI++YSKC ++  A  +F  I   D+ ++N+MI+G+   G 
Sbjct: 233 CLALKIGFGFCDYVLTG--LISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGG 290

Query: 410 CGKAYELFIKMQESD-------------------------------VPPNVITWNVLISG 438
              + +LF ++  S                                V   +I    + + 
Sbjct: 291 TECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTA 350

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
           +    N+   +DL + +  ++  ++   +WN++I+GY Q G    A+ +F++M  + F P
Sbjct: 351 FTAIYNKLNEIDLARHL-FDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTP 409

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           N VTI ++L ACA L + +  K +H  +   +LE ++ V  +L+D YAK GNI  +  +F
Sbjct: 410 NAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLF 469

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           D MS K+ +TWN++I GY LHG+ H AL L+++M   G  P+  TFLS++ A S AG+V 
Sbjct: 470 DSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVG 529

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            G+++F ++   Y+I P+IEHY+ M+D+ GRSG+LE+A+EFI+ MP+EP  ++W  LL A
Sbjct: 530 EGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGA 589

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
           C IH + D+A LA ERLF+L+PG V    L+  IY++      A  +R++ ++     S 
Sbjct: 590 CMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSP 649

Query: 739 GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--------TARSSHSGLCIEEE 790
           G   IEV    + FV+G  S S++  +Y+ L+ +   +        T  + H    +EEE
Sbjct: 650 GCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQAETVPALHD---VEEE 706

Query: 791 EKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLAD 850
           EKE    +HSEKLA+AF LI +++  + IRI+KN+R+C+ CH   K++S +    I + D
Sbjct: 707 EKELAVNVHSEKLAIAFGLI-TTEPGNEIRIIKNLRVCLDCHTATKFISKITERVIVVRD 765

Query: 851 SKCLHHFKNGQCSCGDYW 868
           +   HHFK+G CSCGDYW
Sbjct: 766 ANRFHHFKDGICSCGDYW 783



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 203/439 (46%), Gaps = 43/439 (9%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           +VFV + L+ +Y K   +  AR+VF+ M ER+   W+ MI    ++  + + ++LF  MV
Sbjct: 142 NVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMV 201

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            DG+  D      +L A     + + G  +  L +K+G      V   ++++Y KCG + 
Sbjct: 202 ADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVN 261

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-------------------- 249
            AR  F  ++  D +A+N+MISG+   G  + + +LF ++                    
Sbjct: 262 TARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHS 321

Query: 250 ---------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD-- 292
                           +  I L           YN+L + D+A  +         +P+  
Sbjct: 322 PFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDE------SPEKT 375

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           V  W  MISG+ QNG T  A+ LFKEM      PN VTIT+ +SAC  L +L+ G  +H 
Sbjct: 376 VVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHH 435

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
           L        ++ V  +L++MY+KC  +  A ++FD + +K+  +WN+MI GY   GY  +
Sbjct: 436 LIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHE 495

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
           A +L+ +M      P+ +T+  ++      G   E  ++F  M    +++     +  ++
Sbjct: 496 ALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMV 555

Query: 473 AGYQQLGQKNNALGVFRKM 491
               + GQ   AL   +KM
Sbjct: 556 DILGRSGQLEKALEFIKKM 574



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/429 (23%), Positives = 197/429 (45%), Gaps = 46/429 (10%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSF-VGVMPNGVTITSAISACTDLKALAMGME 349
           PD+F +  ++ GF+ N   S ++ L+  +     + P+  T   A++AC++ K L   M 
Sbjct: 73  PDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHL---ML 129

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H+ ++  G+  +V VG++L+++Y K   +  A +VFD + ++D   WN+MI G  +   
Sbjct: 130 LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCC 189

Query: 410 CGKAYELFIKMQESDVPPNVITWNV----------------------------------- 434
              + +LF +M    V  +  T                                      
Sbjct: 190 FDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTG 249

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           LIS Y + G+ + A  LF+R+ + D +     ++N++I+G+   G    ++ +FR++  S
Sbjct: 250 LISLYSKCGDVNTARLLFRRINRPDLI-----AYNAMISGFTANGGTECSVKLFRELLFS 304

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
               +  TI+ ++P  +     +    IHG  ++  +  +  V  +    Y K   I  +
Sbjct: 305 GERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLA 364

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           R +FD    K ++ WN++I GY  +G    A+ LF +M      PN  T  +I+ A +  
Sbjct: 365 RHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQL 424

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G +  GK V   + +   + P I   +A++D+Y + G + EA +  + M  E ++  W  
Sbjct: 425 GSLSFGKWVH-HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMS-EKNTVTWNT 482

Query: 675 LLTACRIHG 683
           ++    +HG
Sbjct: 483 MIFGYGLHG 491



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 10/319 (3%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVF 92
            NG    ++ +   +   G +V  +T + L+        +HLA  +H F +     ++  
Sbjct: 287 ANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPT 346

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V T   ++Y K   +D AR +F++  E+ +  W+AMI  Y+++      + LF  M++  
Sbjct: 347 VSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTE 406

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             P+      IL AC   G    GK +H L+    +     V  +++ +Y KCG +  A 
Sbjct: 407 FTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAW 466

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + F+SM EK+ V WN+MI GY   G   EA +L+++M         VTF  ++ + +  G
Sbjct: 467 QLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAG 526

Query: 273 QCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
                 E+   M     I P +  + CM+    ++G+  +AL+  K+M    V P     
Sbjct: 527 LVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMP---VEPGPAVW 583

Query: 332 TSAISAC-----TDLKALA 345
            + + AC     TD+  LA
Sbjct: 584 GTLLGACMIHKDTDIARLA 602



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/282 (20%), Positives = 119/282 (42%), Gaps = 52/282 (18%)

Query: 425 VP-PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
           VP P++  +NVL+ G+  N +   ++ L+  + +N  +                      
Sbjct: 70  VPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLS--------------------- 108

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID 543
                         P+  T    + AC+       +  +H   +     S++ V ++L+D
Sbjct: 109 --------------PDNFTYAFAVAACS---NDKHLMLLHAHSIIDGYGSNVFVGSALVD 151

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGT 603
            Y K   +VY+R +FDGM  +D + WN++I G V +  +  ++ LF +M + G++ +  T
Sbjct: 152 LYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSST 211

Query: 604 FLSIILAHSLAGMVDLGKKVFCSITE-----CYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
             +++ A +    + +G  + C   +     C  ++      + +I LY + G +  A  
Sbjct: 212 VTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVL------TGLISLYSKCGDVNTARL 265

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAV-LAIERLFDLE 699
               +   PD   + A+++    +G  + +V L  E LF  E
Sbjct: 266 LFRRIN-RPDLIAYNAMISGFTANGGTECSVKLFRELLFSGE 306


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 262/883 (29%), Positives = 443/883 (50%), Gaps = 91/883 (10%)

Query: 65  QACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE-RNL 122
           +A   S++++  R++HA  ++L  +   F   KL+  Y+       +  VF  +   +N+
Sbjct: 12  RALSSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNV 71

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
           Y W+++I A+S++  + + +E +  + +  + PD + FP +++AC    D E G L++  
Sbjct: 72  YIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQ 131

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           ++++G      V N+++ +Y + G L  AR+ F+ M  +D V+WNS+ISGY   G  +EA
Sbjct: 132 ILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191

Query: 243 HRLFDKMCRE-------------------------------EIKLGV----VTFNILIRS 267
             ++ ++                                   +K GV    V  N L+  
Sbjct: 192 LEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAM 251

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           Y +  +   A  +   M    +  D  T+  MI G+ +     +++ +F E +     P+
Sbjct: 252 YLKFSRPTDARRVFDEM----VVRDSVTYNTMICGYLKLEMVEESVKMFLE-NLDQFKPD 306

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            +T+TS + AC  L+ L++   I++  ++ GF  +  V N LI++Y+KC ++  A  VF+
Sbjct: 307 ILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFN 366

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------------- 432
            ++ KD  SWNS+I+GY Q+G   +A +LF  M   +   + IT+               
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKF 426

Query: 433 --------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                               N LI  Y + G   +++ +F  MG  D     T +WN++I
Sbjct: 427 GKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLD-----TVTWNTVI 481

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
           +   + G     L V  +M+ +   P+  T L  LP CA L A    KEIH C+LR   E
Sbjct: 482 SACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYE 541

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
           S L + N+LI+ Y+K G +  S  +F+ MS +D++TW  +I  Y ++G    AL+ F  M
Sbjct: 542 SELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDM 601

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
           +  G+ P+   F+++I A S +G+V+ G   F  +   Y+I PMIEHY+ ++DL  RS K
Sbjct: 602 EKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQK 661

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQI 712
           + +A EFI+ MPIEPD+SIW ++L ACR  G+++ A     R+ +L P D     L    
Sbjct: 662 ISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNA 721

Query: 713 YAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYS-------DLL 765
           YA   K +    +RK  R+   + + G  WIE+   V+ F +G  S   S       ++L
Sbjct: 722 YAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDDSAPQSEAIHKSLEIL 781

Query: 766 YSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNI 825
           YS +        +R     L  EEE++  I G HSE+LA+AF L+ +++    ++++KN+
Sbjct: 782 YSLMAKEGYIPDSREVSQNLEEEEEKRRLICG-HSERLAIAFGLL-NTEPGTPLQVMKNL 839

Query: 826 RMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           R+C  CHE  K +S +   EI + D+   H FK+G CSC D W
Sbjct: 840 RVCSDCHEVTKLISKIVGREILVRDANRFHLFKDGICSCKDRW 882



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 139/550 (25%), Positives = 247/550 (44%), Gaps = 83/550 (15%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQAC---IDSNSIHLARKLHAFLNLVTEIDV 91
           NG   +A+     +        + T+ ++++AC    D+    L  K    L +  E D+
Sbjct: 84  NGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYK--QILEMGFESDL 141

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           +V   L+ +Y++ G L  AR+VF++M  R+L +W+++I  YS    + E +E++  +   
Sbjct: 142 YVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNS 201

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            + PD F    +L A  N    + G+ +H   +K G++ V  V N +LA+Y+K  +   A
Sbjct: 202 WIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDA 261

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF------------------------- 246
           RR F+ M  +D V +N+MI GY ++   +E+ ++F                         
Sbjct: 262 RRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQFKPDILTVTSVLCACGHLR 321

Query: 247 ---------DKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                    + M R    L     NILI  Y + G    A ++   ME      D  +W 
Sbjct: 322 DLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSME----CKDTVSWN 377

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            +ISG+ Q+G   +A+ LFK M  +    + +T    IS  T L  L  G  +HS  +K 
Sbjct: 378 SIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKS 437

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           G   D+ V N+LI+MY+KC E+  + ++F+ +   D  +WN++I+   + G      ++ 
Sbjct: 438 GIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVT 497

Query: 418 IKMQESDVPPNVITW-----------------------------------NVLISGYIQN 442
            +M+++ V P++ T+                                   N LI  Y + 
Sbjct: 498 TQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKC 557

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G  + +  +F+RM + D V     +W  +I  Y   G+   AL  F  M+ S   P+ V 
Sbjct: 558 GCLESSFRVFERMSRRDVV-----TWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVV 612

Query: 503 ILSVLPACAY 512
            ++++ AC++
Sbjct: 613 FIALIYACSH 622



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/372 (22%), Positives = 164/372 (44%), Gaps = 15/372 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           +G L EA+ +   +     +    TY+ L+        +   + LH+  +     ID+ V
Sbjct: 386 SGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSV 445

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +YAKCG + D+ ++F  M   +  TW+ +I A  R   +   +++   M ++ +
Sbjct: 446 SNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKV 505

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD   F   L  C +      GK +H  +++ G     ++ N+++ +Y KCG L  + R
Sbjct: 506 VPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFR 565

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            FE M  +D V W  MI  Y   GE ++A   F  M +  I    V F  LI + +  G 
Sbjct: 566 VFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGL 625

Query: 274 CDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            +  +   ++M++   I P +  + C++   +++ + S+A +  + M    + P+     
Sbjct: 626 VEKGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMP---IEPDASIWA 682

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDMIK 390
           S + AC     +     +    +++   D    G S++  N Y+   + +    +   ++
Sbjct: 683 SVLRACRTSGDMETAERVSRRIIELNPDDP---GYSILASNAYAALRKWDKVSLIRKSVR 739

Query: 391 DKDV-----YSW 397
           DK +     YSW
Sbjct: 740 DKHIKKNPGYSW 751


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 247/826 (29%), Positives = 397/826 (48%), Gaps = 106/826 (12%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D  V   L+ +Y+K G +  AR VFE++  R+  +W AM+  Y+++    E + L+  M 
Sbjct: 76  DRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMH 135

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           + G+ P  ++   +L +C     F  G+ +H+   K G      V N+++ +Y++CG   
Sbjct: 136 RAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFR 195

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A R F  M  +D V +N++ISG+ Q    + A  +F++M    +    VT + L+ +  
Sbjct: 196 LAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACA 255

Query: 270 QLGQCDVAMEMVKRMESLGITPD-------------------------------VFTWTC 298
            LG      ++   +   G++ D                               V  W  
Sbjct: 256 SLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNL 315

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           ++  F Q    +++ +LF +M   G+ PN  T    +  CT    + +G +IHSL+VK G
Sbjct: 316 ILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTG 375

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
           F  D+ V   LI+MYSK   LE A RV +M+K+KDV SW SMIAGY Q  YC  A   F 
Sbjct: 376 FESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFK 435

Query: 419 KMQESDVPPN-----------------------------------VITWNVLISGYIQNG 443
           +MQ+  + P+                                   V  WN L++ Y + G
Sbjct: 436 EMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCG 495

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
              EA   F+ +   D++     +WN L++G+ Q G    AL VF +M  S    N  T 
Sbjct: 496 RIREAFSSFEEIEHKDEI-----TWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTF 550

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
           +S L A A L    + K+IH  V++        V N+LI  Y K G+   ++  F  MS 
Sbjct: 551 VSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSE 610

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           ++ ++WN++I     HG    ALD FDQMK  GL                          
Sbjct: 611 RNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGLS------------------------Y 646

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           F S+++ Y I P  +HY+ +ID++GR+G+L+ A +F+E+MPI  D+ +W  LL+AC++H 
Sbjct: 647 FKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHK 706

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
           NI++  LA + L +LEP D     L+   YA+ GK  +  +VRK+ R+   R   G+ WI
Sbjct: 707 NIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEPGRSWI 766

Query: 744 EVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA-----RSSHSGLCIEEEEKEEISGI 798
           EVKN+V+ F  G      ++ +Y++L  + + V          H     E+E ++    +
Sbjct: 767 EVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQEKYHLFHDKEQEGRDPTDLV 826

Query: 799 HSEKLALAFALIGSSQAP-HTIRIVKNIRMCVHCHETAKYVSMMHH 843
           HSEKLA+ F L+  S  P   +R++KN+R+  +   T+ YV+ +H 
Sbjct: 827 HSEKLAVTFGLM--SLPPCMPLRVIKNLRVEKY---TSLYVNFLHQ 867



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 174/599 (29%), Positives = 285/599 (47%), Gaps = 76/599 (12%)

Query: 152 GLFPDDFLFPKILQAC-GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           GL P DF     L+AC GN   ++    +H+  I  G+   R V N ++ +Y K G ++ 
Sbjct: 38  GLGPLDFACA--LRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLP 95

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI---------------- 254
           ARR FE +  +D V+W +M+SGY Q G  +EA  L+ +M R  +                
Sbjct: 96  ARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTK 155

Query: 255 ---------------KLGVV--TF--NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                          K G    TF  N LI  Y + G   +A  +   M       D  T
Sbjct: 156 AELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPH----RDTVT 211

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           +  +ISG AQ      AL++F+EM   G+ P+ VTI+S ++AC  L  L  G ++HS   
Sbjct: 212 FNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLF 271

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K G + D ++  SL+++Y KC ++E A  +F++    +V  WN ++  + Q     K++E
Sbjct: 272 KAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFE 331

Query: 416 LFIKMQESDVPPNVITWNVLI-----SGYIQNGNEDEA-----------------VDLFQ 453
           LF +MQ + + PN  T+  ++     +G I  G +  +                 +D++ 
Sbjct: 332 LFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYS 391

Query: 454 RMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           + G  +K +R        +  SW S+IAGY Q     +AL  F++MQ    +P+ + + S
Sbjct: 392 KYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLAS 451

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
            +  CA + A  +  +IH  V        + + N+L++ YA+ G I  + + F+ +  KD
Sbjct: 452 AISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKD 511

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
            ITWN L+ G+   G    AL +F +M   G+K N  TF+S + A +    +  GK++  
Sbjct: 512 EITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHA 571

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEA-MEFIEDMPIEPDSSIWEALLTACRIHG 683
            + +        E  +A+I LYG+ G  E+A MEF E    E +   W  ++T+C  HG
Sbjct: 572 RVIKTGHSFE-TEVGNALISLYGKCGSFEDAKMEFSE--MSERNEVSWNTIITSCSQHG 627



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 153/618 (24%), Positives = 268/618 (43%), Gaps = 106/618 (17%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA------FLNLVTE 88
           NG   EA+ +   +   G         ++L +C  +      R +HA      F +    
Sbjct: 121 NGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCS---- 176

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            + FV   L+++Y +CG    A  VF DM  R+  T++ +I  +++       +E+F  M
Sbjct: 177 -ETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEM 235

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
              GL PD      +L AC + GD + G  +HS + K GMS    +  S+L +YVKCG +
Sbjct: 236 QSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDV 295

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             A   F   +  + V WN ++  + QI +  ++  LF +M    I+    T+  ++R+ 
Sbjct: 296 ETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTC 355

Query: 269 NQLGQCDVA-------------------------------MEMVKRMESLGITPDVFTWT 297
              G+ D+                                +E  +R+  +    DV +WT
Sbjct: 356 TCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWT 415

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            MI+G+ Q+     AL  FKEM   G+ P+ + + SAIS C  +KA+  G++IH+     
Sbjct: 416 SMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVS 475

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           G++ DV + N+L+N+Y++C  +  A   F+ I+ KD  +WN +++G+ Q+G   +A ++F
Sbjct: 476 GYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVF 535

Query: 418 IKMQESDVPPNVITW-----------------------------------NVLISGYIQN 442
           ++M +S V  NV T+                                   N LIS Y + 
Sbjct: 536 MRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKC 595

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G+ ++A   F  M      +RN  SWN++I    Q G+   AL  F +M+          
Sbjct: 596 GSFEDAKMEFSEMS-----ERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEG------- 643

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
            LS   + +         + + CV               ID + ++G +  ++   + M 
Sbjct: 644 -LSYFKSMSDKYGIRPRPDHYACV---------------IDIFGRAGQLDRAKKFVEEMP 687

Query: 563 -SKDIITWNSLICGYVLH 579
            + D + W +L+    +H
Sbjct: 688 IAADAMVWRTLLSACKVH 705



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 203/419 (48%), Gaps = 43/419 (10%)

Query: 300 ISGFAQNGRTSQALDLF--KEMSFVGVMPNGVTITSAISACT-DLKALAMGMEIHSLAVK 356
           ++GF      ++ L LF  K     G+ P  +    A+ AC  + +   +  EIH+ A+ 
Sbjct: 13  LAGFLAQEDPAKVLSLFADKARQHGGLGP--LDFACALRACRGNGRRWQVVPEIHAKAIT 70

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G   D +VGN LI++YSK   +  A RVF+ +  +D  SW +M++GY Q G   +A  L
Sbjct: 71  RGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWL 130

Query: 417 FIKMQESDVPPNVITWNVLIS-----------------GYIQN-------GNEDEAVDLF 452
           + +M  + V P     + ++S                 GY Q        GN    + L+
Sbjct: 131 YRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGN--ALITLY 188

Query: 453 QRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            R G          D   R+T ++N+LI+G+ Q     +AL +F +MQSS   P+CVTI 
Sbjct: 189 LRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTIS 248

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           S+L ACA L    K  ++H  + +  + S   +  SL+D Y K G++  +  IF+  +  
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRT 308

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           +++ WN ++  +        + +LF QM++ G++PN+ T+  I+   +  G +DLG+++ 
Sbjct: 309 NVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIH 368

Query: 625 C-SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
             S+   ++    +     +ID+Y + G LE+A   +E M  E D   W +++     H
Sbjct: 369 SLSVKTGFESDMYVS--GVLIDMYSKYGWLEKARRVLE-MLKEKDVVSWTSMIAGYVQH 424



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 104/441 (23%), Positives = 206/441 (46%), Gaps = 16/441 (3%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT--EIDVFVKT 95
           L ++  +   + T G +  + TY  +L+ C  +  I L  ++H+ L++ T  E D++V  
Sbjct: 326 LAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHS-LSVKTGFESDMYVSG 384

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            L+ +Y+K G L+ AR V E ++E+++ +W++MI  Y + +  ++ +  F  M + G++P
Sbjct: 385 VLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWP 444

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D+      +  C        G  +H+ V   G S    + N+++ +Y +CG++  A   F
Sbjct: 445 DNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSF 504

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           E ++ KD + WN ++SG+ Q G ++EA ++F +M +  +K  V TF   + +   L +  
Sbjct: 505 EEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIK 564

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
              ++  R+   G + +      +IS + + G    A   F EMS    +     ITS  
Sbjct: 565 QGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCS 624

Query: 336 SACTDLKAL----AMGME----IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER-VF 386
                L+AL     M  E      S++ K G          +I+++ +  +L+ A++ V 
Sbjct: 625 QHGRGLEALDFFDQMKKEGLSYFKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVE 684

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG--- 443
           +M    D   W ++++  C+     +  EL  K      P +  ++ +L + Y   G   
Sbjct: 685 EMPIAADAMVWRTLLSA-CKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWA 743

Query: 444 NEDEAVDLFQRMGKNDKVKRN 464
           N D+   + +  G   +  R+
Sbjct: 744 NRDQVRKMMRDRGVRKEPGRS 764



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 34/244 (13%)

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           V EIH   + R L     V N LID Y+K+G ++ +R +F+ +S++D ++W +++ GY  
Sbjct: 61  VPEIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQ 120

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV--------FCSIT-- 628
           +G    AL L+ QM   G+ P      S++ + + A +   G+ V        FCS T  
Sbjct: 121 NGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFV 180

Query: 629 ------------------ECYQIIPMIE--HYSAMIDLYGRSGKLEEAMEFIEDMP---I 665
                               +  +P  +   ++ +I  + +    E A+E  E+M    +
Sbjct: 181 GNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGL 240

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE-PGDVLIQRLILQIYAICGKPEDALK 724
            PD     +LL AC   G++         LF      D +++  +L +Y  CG  E AL 
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALV 300

Query: 725 VRKL 728
           +  L
Sbjct: 301 IFNL 304


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 250/822 (30%), Positives = 411/822 (50%), Gaps = 94/822 (11%)

Query: 95  TKLLSVYAKCGC---LDDAREVFE----DMRERN-LYTWSAMIGAYSRDQRWREVVELFF 146
           TKL++  A+      LD AR+ FE    D+R  + L+  +++I  YS     RE + L+ 
Sbjct: 61  TKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYV 120

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M+  G+ P+ + FP +L  C     F  G  +H  V+K+G+     ++N ++  Y +CG
Sbjct: 121 RMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECG 180

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            +    + FE M E++ V+W S+I GY +     EA  LF +M    I+   VT   +I 
Sbjct: 181 HMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVCVIS 240

Query: 267 SYNQLGQCDV-------------------------------AMEMVKRMESLGITPDVFT 295
           +  +L   D+                               A++  KR+    +  ++  
Sbjct: 241 ACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVL 300

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           +  ++S +A+ G   +AL +  EM   G  P+ VT+ SAISA   L  L  G   H   +
Sbjct: 301 YNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVI 360

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           + G      +GN +I+MY KC + E A RVFD++ +K                       
Sbjct: 361 RNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNK----------------------- 397

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
                        V++WN L +G+I+NG+ + A ++F     N   +RN   WN++I+G 
Sbjct: 398 ------------TVVSWNSLTAGFIRNGDVESAWEVF-----NQIPERNAVFWNTMISGL 440

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
            Q     +A+ +FR+MQ      + VT++ +  AC YL A    K +H  + +  +   +
Sbjct: 441 VQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDM 500

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            +  +L+D +A+ G+   +  +F+ M+ +D+  W + I    + G    A  LF+QM   
Sbjct: 501 RLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQ 560

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           G+KP+   F+ ++ A S  G V+ G  +F S+ E + I P IEHY  M+DL GR+G L E
Sbjct: 561 GVKPDVVLFVQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLLGRAGLLRE 619

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A + I+ MP+EP+  +W +LL ACR+H N+++A  A ER+ +L P    +  L+  IYA 
Sbjct: 620 AFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYAS 679

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN 775
            GK  D  +VR   RE   R   G   ++V  +++ F +G   ES+ ++ +  L  + + 
Sbjct: 680 AGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSG--DESHPEMTHIAL--MLQE 735

Query: 776 VTARSSHSG---------LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIR 826
           +  R S +G         L ++E+EKE +   HSEKLA+AF LI + ++   IR+VKN+R
Sbjct: 736 MNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRS-MPIRVVKNLR 794

Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           MC  CH  AK  S++++ EI + D+   H F+ G CSC DYW
Sbjct: 795 MCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 836



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/540 (23%), Positives = 244/540 (45%), Gaps = 69/540 (12%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVF 92
           G GR  EAI +   +   G      T+  +L  C    +     ++H + + +  E DVF
Sbjct: 110 GLGR--EAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVF 167

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           ++  L+  YA+CG +D   +VFE M ERN+ +W+++I  Y+R  R +E V LFF MV+ G
Sbjct: 168 IQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAG 227

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P       ++ AC    D + G+ + + + +LG+   + + N+++ +Y+KCG +  A+
Sbjct: 228 IRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAK 287

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------- 261
           R F+   +++ V +N+++S Y + G   EA  + D+M ++  +   VT            
Sbjct: 288 RLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLV 347

Query: 262 ------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITP------ 291
                                   N++I  Y + G+ ++A  +   M +  +        
Sbjct: 348 DLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTA 407

Query: 292 ------------DVFT---------WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
                       +VF          W  MISG  Q      A++LF+EM   G+  + VT
Sbjct: 408 GFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVT 467

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
           +    SAC  L A  +   +H+   K G   D+ +  +L++M+++C + ++A +VF+ + 
Sbjct: 468 MMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMT 527

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
           ++DV +W + I      G    A  LF +M    V P+V+ +  +++     G  ++ + 
Sbjct: 528 ERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLH 587

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +F  M ++  +      +  ++    + G    A  + + M      PN V   S+L AC
Sbjct: 588 IFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMP---MEPNDVVWGSLLAAC 643



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 152/347 (43%), Gaps = 39/347 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL----------- 83
            G   EA+ +LD +  QG +  R T ++ + A      +   +  H ++           
Sbjct: 311 QGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSI 370

Query: 84  -NLVTEIDVFVK----------------------TKLLSVYAKCGCLDDAREVFEDMRER 120
            N++  ID+++K                        L + + + G ++ A EVF  + ER
Sbjct: 371 GNVI--IDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPER 428

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           N   W+ MI    +   + + +ELF  M  +G+  D      I  ACG  G  E  K +H
Sbjct: 429 NAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVH 488

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
           + + K G+ C  R+  +++ ++ +CG    A + F  M E+D  AW + I      G  +
Sbjct: 489 TYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGE 548

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            A  LF++M  + +K  VV F  ++ + +  GQ +  + +   ME  GI+P +  + CM+
Sbjct: 549 GATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMV 608

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
               + G   +A DL K M    + PN V   S ++AC   K + M 
Sbjct: 609 DLLGRAGLLREAFDLIKSMP---MEPNDVVWGSLLAACRVHKNVEMA 652



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 2/216 (0%)

Query: 19  KSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARK 78
           + N  F +T +  L       +AI +   +  +G K  R T + +  AC    +  LA+ 
Sbjct: 427 ERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKW 486

Query: 79  LHAFLNL-VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 137
           +H ++       D+ + T L+ ++A+CG    A +VF  M ER++  W+A IG  + +  
Sbjct: 487 VHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGN 546

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
                 LF  M+  G+ PD  LF ++L AC + G  E G  + SL+   G+S        
Sbjct: 547 GEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGC 606

Query: 198 VLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISG 232
           ++ +  + G L  A    +SM  E + V W S+++ 
Sbjct: 607 MVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAA 642


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 268/882 (30%), Positives = 435/882 (49%), Gaps = 83/882 (9%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNLVTEIDVF--VKTKLLSVYAKCGCLDDAREVFEDM 117
           Y+ L + C  S ++    +LHA L  +T +       TKL+  YA+ G  + ++ VF+  
Sbjct: 4   YMPLFRRCATSTTL---TQLHAHL-FITGLHRHPPASTKLIESYAQIGIFESSKRVFDTF 59

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMV-QDGLFPDDFLFPKILQACGNCGDFEAG 176
            + + + W  +I  Y     + E V L+  MV QD     +F+FP +L+AC   GD   G
Sbjct: 60  PKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVG 119

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
             +H  VIK G      V  S+L +Y +   L  A + F++M  +D VAW+S++  + Q 
Sbjct: 120 GKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQN 179

Query: 237 GENDEAHRLFDKMCREEIKLGVVTF----------------------------------- 261
           G+  E   +F +M  E ++   VT                                    
Sbjct: 180 GQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLN 239

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N LI  Y +LG    A  + + +      P    WT MIS + Q+G   +AL++F +M  
Sbjct: 240 NSLIVMYGKLGDLYSAERLFENVPCRMTAP----WTPMISCYNQSGCFQEALNVFAKMQE 295

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV-LVGNSLINMYSKCEELE 380
             + PN VT+   + AC  L  +  G  +H   ++     ++  +G +L+ +Y+    L 
Sbjct: 296 FKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLR 355

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN------------ 428
              +VF+ IK+K + SWN++I+ + + G   +A  LF++MQ   + P+            
Sbjct: 356 DCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACG 415

Query: 429 VITWNVL---ISGYI-QNGN-----EDEAVDLFQRMG-------KNDKVK-RNTASWNSL 471
            I+++ L   I GYI + GN     ++  +D++ + G         +K+K ++  +WNS+
Sbjct: 416 TISFSQLGAQIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSM 475

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           I G+ Q G    A+ +F +M  +C   + +T LSV+ AC++L    K K +H  ++   L
Sbjct: 476 ICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGL 535

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
                +  +L D Y+K G +  +  +FD MS + I++W+ +I GY +HG  +A + LF+Q
Sbjct: 536 RKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQ 595

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           M   G+KPN  TF+ I+ A S AG V+ GK  F S++E + + P  +H++ M+DL  R+G
Sbjct: 596 MLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSE-FGVEPKHDHFACMVDLLSRAG 654

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
            L  A + I  +P   +SSIW ALL  CRIH  ID+     + L D++  D     L+  
Sbjct: 655 DLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTADTGYYTLLSN 714

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN 771
           IYA  G  +   KVR + +    R   G   IE+   +Y F  G  S S +  +Y +L+N
Sbjct: 715 IYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPGDTSHSQTKDIYRFLEN 774

Query: 772 VPENVTAR-----SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIR 826
               V A+       +S +   +  KE     HSEKLA+AF +I +++   T+RI KN+R
Sbjct: 775 FRSLVHAQVYDSEPDNSIVGTSKFNKENNVVSHSEKLAIAFGII-NTRPGTTLRISKNLR 833

Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +C  CH  AK  S +   EI + D    H F+NG CSC DYW
Sbjct: 834 VCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCNDYW 875



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 215/459 (46%), Gaps = 40/459 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG+ +E + +   + ++  +    T +++ +AC +  S+ L R +H + +    E +  +
Sbjct: 179 NGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASL 238

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y K G L  A  +FE++  R    W+ MI  Y++   ++E + +F  M +  +
Sbjct: 239 NNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKM 298

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSC-VRRVRNSVLAVYVKCGKLIWAR 212
            P+      +L AC   G  + G+ +H  VI+  M   +  +  +++ +Y   G L    
Sbjct: 299 EPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCH 358

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI------------KLGVVT 260
           + FE++ EK  ++WN++IS + + G+ +EA  LF +M  + +              G ++
Sbjct: 359 KVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTIS 418

Query: 261 F----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
           F                      N LI  Y + G    A +M ++++       + TW  
Sbjct: 419 FSQLGAQIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKE----KSLVTWNS 474

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           MI GF+QNG + +A+ LF +M    V  + +T  S I AC+ L  L  G  +H   +  G
Sbjct: 475 MICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYG 534

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              D  +  +L +MYSKC EL+ A  VFD + ++ + SW+ MIAGY   G       LF 
Sbjct: 535 LRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFN 594

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
           +M  S + PN IT+  ++S     G  +E    F  M +
Sbjct: 595 QMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSE 633



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 151/316 (47%), Gaps = 6/316 (1%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +     NG+  EA+ +   + TQG      +  + L AC   +   L  ++H ++  
Sbjct: 373 NTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIK 432

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
               + FV+  L+ +YAKCG +  A ++FE ++E++L TW++MI  +S++    E + LF
Sbjct: 433 TGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLF 492

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M  + +  D   F  ++QAC + G  E GK +H  +I  G+     +  ++  +Y KC
Sbjct: 493 DQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKC 552

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G+L  A   F+ M E+  V+W+ MI+GY   G+ +    LF++M    IK   +TF  ++
Sbjct: 553 GELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHIL 612

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV--- 322
            + +  G  +        M   G+ P    + CM+   ++ G  + A  +   + F    
Sbjct: 613 SACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANS 672

Query: 323 ---GVMPNGVTITSAI 335
              G + NG  I   I
Sbjct: 673 SIWGALLNGCRIHKRI 688


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 251/835 (30%), Positives = 411/835 (49%), Gaps = 89/835 (10%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ-DGLFPDDFLFPKILQACG 168
           AR+ F+++  RN  T    +  ++R     + ++ F  + +  G          +L+ CG
Sbjct: 57  ARQAFDEIPHRN--TLDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCG 114

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVR-RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
           +  D   GK +H L I+ G       V  S++ +Y+K   ++  R+ FE+M +++ V W 
Sbjct: 115 SVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWT 174

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
           S+++GY Q G   +   LF +M  E +    VTF  ++      G  D+   +  +    
Sbjct: 175 SLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKF 234

Query: 288 GI-------------------------------TPDVFTWTCMISGFAQNGRTSQALDLF 316
           G                                T D+ +W  +++G   NG   +AL LF
Sbjct: 235 GCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLF 294

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
            +      M    T  + I  C ++K L +  ++HS  +K GF     V  +L++ YSK 
Sbjct: 295 HDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKA 354

Query: 377 EELEAAERVFDMIK-DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV- 434
            +L  A  +F ++   ++V SW +MI G  Q G    A  LF +M+E  V PN  T++  
Sbjct: 355 GQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTI 414

Query: 435 ------------------------------LISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                                         L++ Y +  N +EA+ +F+ + + D V   
Sbjct: 415 LTASVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVV--- 471

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV-KEIH 523
             SW++++  Y Q G  + A  +F KM      PN  TI SV+ ACA   A   + ++ H
Sbjct: 472 --SWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFH 529

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
              ++     +L V ++L+  YA+ G+I  ++ IF+  + +D+++WNS++ GY  HG+  
Sbjct: 530 AISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQ 589

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            ALD+F QM++ G++ +  TFLS+I+  + AG+V+ G++ F S+   Y I P +EHY+ M
Sbjct: 590 KALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACM 649

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           +DLY R+GKL+EAM  IE M       +W  LL AC++H N++L  LA E+L  LEP D 
Sbjct: 650 VDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDS 709

Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
               L+  IY+  GK ++  +VRKL      +   G  WI++KN V++F+    S   S+
Sbjct: 710 ATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSE 769

Query: 764 LLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQ 814
            +Y+ L+     +T +    G C         + EE+KE +  +HSE+LALAF LI +  
Sbjct: 770 QIYAKLR----AMTTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPP 825

Query: 815 -APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            AP  + I KN+R+C  CH   K VS +   EI + D    HHF +G CSCGD+W
Sbjct: 826 GAP--LHIFKNLRVCGDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 168/617 (27%), Positives = 285/617 (46%), Gaps = 82/617 (13%)

Query: 36  GRLNEAIT-VLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVF 92
           G +++A+   LD     G +V     + +L+ C       L ++LH           DV 
Sbjct: 81  GSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVG 140

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V T L+ +Y K   + D R+VFE M +RN+ TW++++  Y +D    +V+ELFF M  +G
Sbjct: 141 VGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEG 200

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           ++P+   F  +L    + G  + G+ +H+  +K G      V NS++ +Y KCG +  AR
Sbjct: 201 VWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCCSTVFVCNSLMNMYAKCGLVEEAR 260

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD------------------KMCREEI 254
             F  M+ +D V+WN++++G    G + EA +LF                   K+C    
Sbjct: 261 VVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIK 320

Query: 255 KLGV---VTFNILIRSYNQLGQCDVA-MEMVKRMESLGITPDVF----------TWTCMI 300
           +LG+   +  ++L R ++  G    A M+   +   LG   D+F          +WT MI
Sbjct: 321 QLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMI 380

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +G  QNG    A  LF  M   GV PN  T ++ ++A       ++  +IH+  +K  + 
Sbjct: 381 NGCIQNGDVPLAAALFSRMREDGVAPNDFTYSTILTA----SVASLPPQIHAQVIKTNYE 436

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
              +VG +L+  YSK    E A  +F MI  KDV SW++M+  Y QAG    A  +FIKM
Sbjct: 437 CTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKM 496

Query: 421 QESDVPPNVITW------------------------------------NVLISGYIQNGN 444
               + PN  T                                     + L+S Y + G+
Sbjct: 497 TMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGS 556

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            + A  +F+R     +  R+  SWNS+++GY Q G    AL VFR+M++     + VT L
Sbjct: 557 IESAQCIFER-----QTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFL 611

Query: 505 SVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS- 562
           SV+  CA+     + +     + R   +  ++     ++D Y+++G +  + ++ +GMS 
Sbjct: 612 SVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSF 671

Query: 563 SKDIITWNSLICGYVLH 579
               + W +L+    +H
Sbjct: 672 PAGPMVWRTLLGACKVH 688



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 210/472 (44%), Gaps = 45/472 (9%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF-- 92
           NG   EA+ +     +    + ++TY  +++ C +   + LAR+LH+ + L      +  
Sbjct: 284 NGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSV-LKRGFHSYGN 342

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMR-ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           V T L+  Y+K G L +A ++F  M   +N+ +W+AMI    ++        LF  M +D
Sbjct: 343 VMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMRED 402

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+ P+DF +  IL A            +H+ VIK    C   V  ++LA Y K      A
Sbjct: 403 GVAPNDFTYSTILTA----SVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEA 458

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI------ 265
              F+ +D+KD V+W++M++ Y Q G++D A  +F KM    +K    T + +I      
Sbjct: 459 LSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASP 518

Query: 266 -----------------RSYNQLGQCDVAMEMVKRMESL---------GITPDVFTWTCM 299
                            R ++ L      + M  R  S+             D+ +W  M
Sbjct: 519 TAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSM 578

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMG 358
           +SG+AQ+G + +ALD+F++M   G+  +GVT  S I  C     +  G     S+A   G
Sbjct: 579 LSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYG 638

Query: 359 FTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            T  +     ++++YS+  +L EA   +  M        W +++ G C+     +  +L 
Sbjct: 639 ITPTMEHYACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLL-GACKVHKNVELGKLA 697

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
            +   S  P +  T+ +L + Y   G   E  D  +++    KVK+    SW
Sbjct: 698 AEKLLSLEPFDSATYVLLSNIYSAAGKWKEK-DEVRKLMDTKKVKKEAGCSW 748


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 258/870 (29%), Positives = 427/870 (49%), Gaps = 98/870 (11%)

Query: 79  LHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRW 138
           LHA L     +  F +  L+S Y+KC     AR  F+++ +    +WS+++ AYS +   
Sbjct: 26  LHASLLKSGSLASF-RNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSNNGLP 84

Query: 139 REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV 198
           R  ++ F  M  +G+  ++F  P +L+      D   G  +H++ +  G      V N++
Sbjct: 85  RSAIQAFHGMRAEGVCCNEFALPVVLKCVP---DARLGAQVHAMAMATGFGSDVFVANAL 141

Query: 199 LAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI--- 254
           +A+Y   G +  ARR F   D E++ V+WN ++S Y +  +  +A ++F +M    I   
Sbjct: 142 VAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPT 201

Query: 255 ----------------------------KLG----VVTFNILIRSYNQLGQCDVAMEMVK 282
                                       ++G    V T N L+  Y ++G+ D+A  + +
Sbjct: 202 EFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFE 261

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
           +M       DV +W  +ISG   NG   +A++L  +M + G++PN  T++S + AC+   
Sbjct: 262 KMPD----SDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           A  +G +IH   +K     D  +G  L++MY+K   L+ A +VFD +  +D+   N++I+
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITW------------------------------ 432
           G    G   +A  LF ++++  +  N  T                               
Sbjct: 378 GCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437

Query: 433 -----NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
                N LI  Y +     +A  +F+     D +     +  S+I    Q      A+ +
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDANRVFEECSSGDII-----ACTSMITALSQCDHGEGAIKL 492

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           F +M      P+   + S+L ACA L A  + K++H  +++R   S     N+L+ TYAK
Sbjct: 493 FMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAK 552

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G+I  +   F  +  + +++W+++I G   HG    AL+LF +M   G+ PN  T  S+
Sbjct: 553 CGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSV 612

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           + A + AG+VD  K+ F S+ E + I    EHYS MIDL GR+GKL++AME +  MP + 
Sbjct: 613 LCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQA 672

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           ++SIW ALL A R+H + +L  LA E+LF LEP       L+   YA  G   +  KVRK
Sbjct: 673 NASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRK 732

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC- 786
           L +++  +      WIEVK+ V+TF+ G  S   +  +Y+ L  + + +    S +G   
Sbjct: 733 LMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLM----SKAGFVP 788

Query: 787 --------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
                   ++  EKE +   HSE+LA+AFAL+ S+     IR+ KN+R+C  CH   K++
Sbjct: 789 NVDVDLHDLDRSEKELLLSHHSERLAVAFALL-STPPGAPIRVKKNLRICRDCHVAFKFI 847

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S +   EI + D    HHF++G CSCGDYW
Sbjct: 848 SKIVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 222/489 (45%), Gaps = 32/489 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           N +  +AI V   +   G +     +  ++ AC  S +I   R++HA +  +  + DVF 
Sbjct: 180 NDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFT 239

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y K G +D A  +FE M + ++ +W+A+I     +      +EL   M   GL
Sbjct: 240 ANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGL 299

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+ F    IL+AC   G F+ G+ +H  +IK        +   ++ +Y K   L  AR+
Sbjct: 300 VPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARK 359

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M  +D +  N++ISG    G +DEA  LF ++ +E + +   T   +++S   L  
Sbjct: 360 VFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEA 419

Query: 274 CDVAMEMVKRMESLGI-------------------------------TPDVFTWTCMISG 302
                ++      +G                                + D+   T MI+ 
Sbjct: 420 ASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITA 479

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
            +Q      A+ LF EM   G+ P+   ++S ++AC  L A   G ++H+  +K  F  D
Sbjct: 480 LSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSD 539

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
              GN+L+  Y+KC  +E AE  F  + ++ V SW++MI G  Q G+  +A ELF +M +
Sbjct: 540 AFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVD 599

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
             + PN IT   ++      G  DEA   F  M +   + R    ++ +I    + G+ +
Sbjct: 600 EGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLD 659

Query: 483 NALGVFRKM 491
           +A+ +   M
Sbjct: 660 DAMELVNSM 668



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 145/584 (24%), Positives = 261/584 (44%), Gaps = 69/584 (11%)

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +H+ ++K G   +   RN +++ Y KC +   ARRFF+ + +   V+W+S+++ Y  
Sbjct: 23  GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLVTAYSN 80

Query: 236 IGENDEAHRLFDKM-----------------CREEIKLG---------------VVTFNI 263
            G    A + F  M                 C  + +LG               V   N 
Sbjct: 81  NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARLGAQVHAMAMATGFGSDVFVANA 140

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+  Y   G  D A  +    +S     +  +W  ++S + +N +   A+ +F EM + G
Sbjct: 141 LVAMYGGFGFMDDARRVFNEADS---ERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           + P     +  ++ACT  + +  G ++H++ V+MG+  DV   N+L++MY K   ++ A 
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIAS 257

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL-------- 435
            +F+ + D DV SWN++I+G    G+  +A EL ++M+ S + PNV T + +        
Sbjct: 258 VIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAG 317

Query: 436 -------ISGYIQNGNEDE----AVDLFQRMGKNDKV--KRNTASW---------NSLIA 473
                  I G++   N D      V L     KN  +   R    W         N+LI+
Sbjct: 318 AFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALIS 377

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
           G    G+ + AL +F +++      N  T+ +VL + A L A++  +++H   ++     
Sbjct: 378 GCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIF 437

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
              V+N LID+Y K   +  +  +F+  SS DII   S+I           A+ LF +M 
Sbjct: 438 DAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEML 497

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
             GL+P+     S++ A +     + GK+V   + +  Q +      +A++  Y + G +
Sbjct: 498 RKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK-RQFMSDAFAGNALVYTYAKCGSI 556

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
           E+A      +P E     W A++     HG+   A+    R+ D
Sbjct: 557 EDAELAFSSLP-ERGVVSWSAMIGGLAQHGHGKRALELFGRMVD 599


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 231/707 (32%), Positives = 373/707 (52%), Gaps = 58/707 (8%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N++++ Y++  K   AR  F+ M E+D  +WN M++GY +     EAH+LFD M +++  
Sbjct: 81  NAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKD-- 138

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             VV++N ++  Y Q G  D A E+  +M       +  +W  +++ +  NGR  +A  L
Sbjct: 139 --VVSWNAMLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRL 192

Query: 316 FKEMSFVGVMPNGVTITSAI--SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
           F+  S   ++     +   +  +   D + L   M +           DV+  N++I+ Y
Sbjct: 193 FESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVR----------DVISWNTMISGY 242

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ------------ 421
           ++  +L  A+R+F+    +DV++W +M++GY Q G   +A + F +M             
Sbjct: 243 AQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLA 302

Query: 422 ---------------ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                          E+    N+ +WN +I+GY QNG   +A  LF  M + D V     
Sbjct: 303 GYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCV----- 357

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           SW ++I+GY Q G    AL +F +M+      N  T    L  CA + A    K++HG V
Sbjct: 358 SWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQV 417

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           ++   E+   V N+L+  Y K G+   +  +F+G+  KD+++WN++I GY  HGF   AL
Sbjct: 418 VKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQAL 477

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
            LF+ MK  G+KP+  T + ++ A S +G++D G + F S+   Y + P  +HY+ MIDL
Sbjct: 478 VLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDL 537

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GR+G+LEEA   + +MP +P ++ W ALL A RIHGN +L   A E +F +EP +  + 
Sbjct: 538 LGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMY 597

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
            L+  +YA  G+  D  K+R   RE   +   G  W+EV+N ++TF  G       D +Y
Sbjct: 598 VLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIY 657

Query: 767 SWLQNVPENVTARS--SHSGLC---IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRI 821
           ++L+ +   +      S + L    +EEEEKE +   HSEKLA+AF ++ +  A   IR+
Sbjct: 658 AFLEELDLKMRREGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGIL-TIPAGRPIRV 716

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +KN+R+C  CH   K++S +    I L DS   HHF  G CSCGDYW
Sbjct: 717 MKNLRVCQDCHNAIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763



 Score =  202 bits (515), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 222/458 (48%), Gaps = 44/458 (9%)

Query: 80  HAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
           H   +L+ + DV     +LS YA+ G +D+AREVF  M  RN  +W+ ++ AY  + R +
Sbjct: 128 HKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLK 187

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E   LF       L   + L    ++     GD  A +L   + ++  +S      N+++
Sbjct: 188 EARRLFESQSNWELISWNCLMGGYVKR-NMLGD--ARQLFDRMPVRDVISW-----NTMI 239

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CREEIKLGV 258
           + Y + G L  A+R F     +D   W +M+SGY Q G  DEA + FD+M  + EI    
Sbjct: 240 SGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEI---- 295

Query: 259 VTFNILIRSYNQLGQCDVAMEMVKRMESLGITP--------------------------- 291
            ++N ++  Y Q  +  +A E+ + M    I+                            
Sbjct: 296 -SYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQR 354

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           D  +W  +ISG+AQNG   +AL++F EM   G   N  T + A+S C D+ AL +G ++H
Sbjct: 355 DCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVH 414

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
              VK GF     VGN+L+ MY KC   + A  VF+ I++KDV SWN+MIAGY + G+  
Sbjct: 415 GQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGR 474

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
           +A  LF  M+++ V P+ IT   ++S    +G  D   + F  M ++  VK  +  +  +
Sbjct: 475 QALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCM 534

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           I    + G+   A  + R M    F P   +  ++L A
Sbjct: 535 IDLLGRAGRLEEAENLMRNMP---FDPGAASWGALLGA 569



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 149/597 (24%), Positives = 266/597 (44%), Gaps = 91/597 (15%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D+    K +S + + G  D A  VF  M  R+  +++AMI  Y R+ ++    +LF  M 
Sbjct: 45  DIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMP 104

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSC---------------VRRV 194
           +  LF  + +    ++   N    EA KL   +  K  +S                 R V
Sbjct: 105 ERDLFSWNVMLTGYVR---NRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREV 161

Query: 195 ------RNSV-----LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
                 RNS+     LA YV  G+L  ARR FES    + ++WN ++ GY +     +A 
Sbjct: 162 FNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDAR 221

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
           +LFD+M   +    V+++N +I  Y Q+G     +   KR+ +     DVFTWT M+SG+
Sbjct: 222 QLFDRMPVRD----VISWNTMISGYAQVGD----LSQAKRLFNESPIRDVFTWTAMVSGY 273

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
            QNG   +A   F EM     + N ++  + ++     K + +  E+           ++
Sbjct: 274 VQNGMVDEARKYFDEMP----VKNEISYNAMLAGYVQYKKMVIAGELFEAMP----CRNI 325

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
              N++I  Y +   +  A ++FDM+  +D  SW ++I+GY Q G+  +A  +F++M+  
Sbjct: 326 SSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRD 385

Query: 424 DVPPNVITW-----------------------------------NVLISGYIQNGNEDEA 448
               N  T+                                   N L+  Y + G+ DEA
Sbjct: 386 GESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEA 445

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
            D+F+ + + D V     SWN++IAGY + G    AL +F  M+ +   P+ +T++ VL 
Sbjct: 446 NDVFEGIEEKDVV-----SWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLS 500

Query: 509 ACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDI 566
           AC++    ++  E    + R  +++ +      +ID   ++G +  +  +   M      
Sbjct: 501 ACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGA 560

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSLAGM-VDLGK 621
            +W +L+    +HG  +  L        F ++P N G ++ +   ++ +G  VD+GK
Sbjct: 561 ASWGALLGASRIHG--NTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGK 615



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 128/531 (24%), Positives = 218/531 (41%), Gaps = 138/531 (25%)

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           +VT+N  I S+ + G CD A+ +   M          ++  MISG+ +N + S A DLF 
Sbjct: 46  IVTWNKAISSHMRNGHCDSALRVFNSMPRRSSV----SYNAMISGYLRNAKFSLARDLFD 101

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
           +M                                          D+   N ++  Y +  
Sbjct: 102 KMP---------------------------------------ERDLFSWNVMLTGYVRNR 122

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
            L  A ++FD++  KDV SWN+M++GY Q G+  +A E+F KM       N I+WN L++
Sbjct: 123 RLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHR----NSISWNGLLA 178

Query: 438 GYIQNGNEDEAVDLFQRMGK----------NDKVKRN----------------TASWNSL 471
            Y+ NG   EA  LF+                 VKRN                  SWN++
Sbjct: 179 AYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTM 238

Query: 472 IAGYQQLGQKNNALGVFRK---------------------MQSSCFYPNCVTILSVLPAC 510
           I+GY Q+G  + A  +F +                     +  +  Y + + + + +   
Sbjct: 239 ISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYN 298

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVM-----NSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           A L    + K++   V+   L  ++P       N++I  Y ++G I  +R +FD M  +D
Sbjct: 299 AMLAGYVQYKKM---VIAGELFEAMPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRD 355

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
            ++W ++I GY  +G +  AL++F +MK  G   NR TF   +   +    ++LGK+V  
Sbjct: 356 CVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHG 415

Query: 626 SI------TECY-------------------QIIPMIEH-----YSAMIDLYGRSGKLEE 655
            +      T C+                    +   IE      ++ MI  Y R G   +
Sbjct: 416 QVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQ 475

Query: 656 AMEFIEDMP---IEPDSSIWEALLTACRIHGNIDLAV---LAIERLFDLEP 700
           A+   E M    ++PD      +L+AC   G ID       +++R ++++P
Sbjct: 476 ALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKP 526



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 175/387 (45%), Gaps = 70/387 (18%)

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM-QESDVPPNVI----------------- 430
            KD D+ +WN  I+ + + G+C  A  +F  M + S V  N +                 
Sbjct: 41  FKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLF 100

Query: 431 ---------TWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK 481
                    +WNV+++GY++N    EA  LF  M K D V     SWN++++GY Q G  
Sbjct: 101 DKMPERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVV-----SWNAMLSGYAQNGFV 155

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS----LPV 537
           + A  VF KM     + N ++   +L A    V + ++KE      RR  ES     L  
Sbjct: 156 DEAREVFNKMP----HRNSISWNGLLAA---YVHNGRLKEA-----RRLFESQSNWELIS 203

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
            N L+  Y K   +  +R +FD M  +D+I+WN++I GY   G      DL    + F  
Sbjct: 204 WNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVG------DLSQAKRLFNE 257

Query: 598 KPNRGTF--LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
            P R  F   +++  +   GMVD  +K F  +    +I      Y+AM+  Y +  K+  
Sbjct: 258 SPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEI-----SYNAMLAGYVQYKKMVI 312

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG-DVLIQRLILQIYA 714
           A E  E MP    SS W  ++T    +G I  A     +LFD+ P  D +    I+  YA
Sbjct: 313 AGELFEAMPCRNISS-WNTMITGYGQNGGIAQA----RKLFDMMPQRDCVSWAAIISGYA 367

Query: 715 ICGKPEDALKV---RKLERENTRRNSF 738
             G  E+AL +    K + E++ R++F
Sbjct: 368 QNGHYEEALNMFVEMKRDGESSNRSTF 394



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 206/478 (43%), Gaps = 71/478 (14%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           NGRL EA  + +S +         ++  L+   +  N +  AR+L    + +   DV   
Sbjct: 183 NGRLKEARRLFESQSNW----ELISWNCLMGGYVKRNMLGDARQL---FDRMPVRDVISW 235

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             ++S YA+ G L  A+ +F +   R+++TW+AM+  Y ++    E  + F  M      
Sbjct: 236 NTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMP----V 291

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR--NSVLAVYVKCGKLIWAR 212
            ++  +  +L      G  +  K++ +  +   M C R +   N+++  Y + G +  AR
Sbjct: 292 KNEISYNAML-----AGYVQYKKMVIAGELFEAMPC-RNISSWNTMITGYGQNGGIAQAR 345

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------- 261
           + F+ M ++D V+W ++ISGY Q G  +EA  +F +M R+       TF           
Sbjct: 346 KLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIA 405

Query: 262 ------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                   N L+  Y + G  D A ++ + +E      DV +W 
Sbjct: 406 ALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEE----KDVVSWN 461

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVK 356
            MI+G+A++G   QAL LF+ M   GV P+ +T+   +SAC+    +  G E  +S+   
Sbjct: 462 TMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSGLIDRGTEYFYSMDRD 521

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWNSM-----IAGYCQAGYC 410
                       +I++  +   LE AE +  +M  D    SW ++     I G  + G  
Sbjct: 522 YNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWGALLGASRIHGNTELGE- 580

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
            KA E+  KM+    P N   + +L + Y  +G   +   +  +M +    K    SW
Sbjct: 581 -KAAEMVFKME----PQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTGYSW 633


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 263/888 (29%), Positives = 429/888 (48%), Gaps = 116/888 (13%)

Query: 45  LDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKC 104
           L S+    A   +NT   LL A +   ++  AR L      +TE +V     +++ YAK 
Sbjct: 54  LVSVGLASAVFLQNT---LLHAYLSCGALPDARGL--LRGDITEPNVITHNIMMNGYAKL 108

Query: 105 GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKI 163
           G L DA E+F  M  R++ +W+ ++  Y +  R+ + +E F  M + G   P+ F F   
Sbjct: 109 GSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCA 168

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR---------- 213
           +++CG  G  E    +  L+ K G      V   ++ ++V+CG + +A +          
Sbjct: 169 MKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTV 228

Query: 214 ---------------------FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
                                 FESM E+D V+WN M+S   Q G   EA  +   M   
Sbjct: 229 FCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNR 288

Query: 253 EIKLGVVTFNILIRSYNQLGQCD-------------------VAMEMV------------ 281
            ++L   T+   + +  +L                       VA  MV            
Sbjct: 289 GVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEA 348

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
           +R+ S     +  +WT +I GF Q G  S++L+LF +M    +  +   + + IS C++ 
Sbjct: 349 RRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNR 408

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
             + +  ++HSL++K G T  V++ NSLI+MY+KC  L+                     
Sbjct: 409 MDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQ--------------------- 447

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
                      A  +F  M+E D+    ++W  +++ Y Q GN  +A + F  M      
Sbjct: 448 ----------NAESIFSSMEERDI----VSWTGMLTAYSQVGNIGKAREFFDGMST---- 489

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC-FYPNCVTILSVLPACAYLVASNKVK 520
            RN  +WN+++  Y Q G + + L ++  M +     P+ VT +++   CA + A+    
Sbjct: 490 -RNVITWNAMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGD 548

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
           +I G  ++  L     VMN++I  Y+K G I  +R IFD +S KD+++WN++I GY  HG
Sbjct: 549 QITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHG 608

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
               A+++FD M   G KP+  ++++++ + S +G+V  GK  F  +   + + P +EH+
Sbjct: 609 MGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHF 668

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
           S M+DL  R+G L EA   I++MP++P + +W ALL+AC+ HGN +LA LA + LFDL+ 
Sbjct: 669 SCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDS 728

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
            D     L+ +IYA  GK  D+ +VRKL R+   + + G  W+EVKN V+ F     S  
Sbjct: 729 PDSGGYMLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHP 788

Query: 761 YSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIR 820
               +   L  + E +    +  G    E  + EI   HSEKLA+AF ++ +  A   I 
Sbjct: 789 QVIAIREKLDELMEKI----AQLGYVRTESLRSEIH--HSEKLAVAFGIM-NLPAWMPIH 841

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           I+KN+R+C  CH   K +S +   E  + D+   HHFK G CSCGDYW
Sbjct: 842 IMKNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFKGGSCSCGDYW 889



 Score =  216 bits (550), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 213/431 (49%), Gaps = 39/431 (9%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           L  +GR  EA++V   +  +G ++   TY + L AC   +S+   ++LHA  +  +  ID
Sbjct: 269 LSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCID 328

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            +V + ++ +YAKCGC  +AR VF  +R+RN  +W+ +IG + +   + E +ELF  M  
Sbjct: 329 PYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRA 388

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + +  D F    I+  C N  D    + +HSL +K G +    + NS++++Y KCG L  
Sbjct: 389 ELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQN 448

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A   F SM+E+D V+W  M++ Y Q+G   +A   FD M        V+T+N ++ +Y Q
Sbjct: 449 AESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRN----VITWNAMLGAYIQ 504

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G  +  ++M   M                                  ++   V+P+ VT
Sbjct: 505 HGAEEDGLKMYSAM----------------------------------LTEKDVIPDWVT 530

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
             +    C D+ A  +G +I    VK+G   D  V N++I MYSKC  +  A ++FD + 
Sbjct: 531 YVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAVITMYSKCGRISEARKIFDFLS 590

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
            KD+ SWN+MI GY Q G   +A E+F  M +    P+ I++  ++S    +G   E   
Sbjct: 591 RKDLVSWNAMITGYSQHGMGKQAIEIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKF 650

Query: 451 LFQRMGKNDKV 461
            F  + ++  V
Sbjct: 651 YFDMLKRDHNV 661



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 142/571 (24%), Positives = 248/571 (43%), Gaps = 100/571 (17%)

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES-MDEKD 222
           L++CG  G     + +H  ++ +G++    ++N++L  Y+ CG L  AR      + E +
Sbjct: 35  LRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPN 94

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVK 282
            +  N M++GY ++G   +A  LF +M R +    V ++N L+  Y Q G+   AME   
Sbjct: 95  VITHNIMMNGYAKLGSLSDAEELFGRMPRRD----VTSWNTLMSGYYQSGRFLDAMESFV 150

Query: 283 RMESLGIT-PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
            M   G + P+ FT+ C                                   A+ +C  L
Sbjct: 151 SMRRSGDSLPNAFTFGC-----------------------------------AMKSCGAL 175

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
               + +++  L  K GF  D  V   +++M+ +C  ++ A + F  I+   V+  NSM+
Sbjct: 176 GWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVFCRNSML 235

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
           AGY ++     A ELF  M E D    V++WN+++S   Q+G   E              
Sbjct: 236 AGYAKSYGVDHALELFESMPERD----VVSWNMMVSALSQSGRARE-------------- 277

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
                                 AL V   M +     +  T  S L ACA L +    K+
Sbjct: 278 ----------------------ALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQ 315

Query: 522 IHGCVLRRSLESSLP-----VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
           +H  V+R     SLP     V +++++ YAK G    +R +F  +  ++ ++W  LI G+
Sbjct: 316 LHAQVIR-----SLPCIDPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGF 370

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC-SITECYQIIP 635
           + +G +  +L+LF+QM++  +  ++    +II   S    + L +++   S+   +    
Sbjct: 371 LQYGCFSESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAV 430

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
           +I +  ++I +Y + G L+ A      M  E D   W  +LTA    GNI  A       
Sbjct: 431 VISN--SLISMYAKCGNLQNAESIFSSME-ERDIVSWTGMLTAYSQVGNIGKA----REF 483

Query: 696 FD-LEPGDVLIQRLILQIYAICGKPEDALKV 725
           FD +   +V+    +L  Y   G  ED LK+
Sbjct: 484 FDGMSTRNVITWNAMLGAYIQHGAEEDGLKM 514


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 243/793 (30%), Positives = 402/793 (50%), Gaps = 118/793 (14%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG---KLIWARRFFE 216
           +  ++Q C +   F+ GK +H+ +I  G +    +   +L +Y + G    L +AR+ FE
Sbjct: 74  YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV----VTFNILIRSYNQLG 272
            M E++  AWN+MI  Y ++ +  EA  +FD+M    +K+GV     TF   +R    L 
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEAWGIFDRM----LKIGVCPDNFTFASALRVCGALR 189

Query: 273 QCDVAMEMVKRMESLGITPDVF-------------------------------TWTCMIS 301
             D   ++  ++ + G   D F                               TW  +IS
Sbjct: 190 SRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIIS 249

Query: 302 GFAQNGRTSQALDLFKEM--SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
             AQ G  + AL LF  M  S  G+ P+  T T+ ++ C + +    G +IH+  ++   
Sbjct: 250 AEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANI 309

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
           T +++V   L++MYS+C  L  A+ +F+ + +++ YSWNSMI GY Q G   +A  LF +
Sbjct: 310 TKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQ 369

Query: 420 MQESDVPPNVITWNVLISG----------------YIQNGNEDEA------VDLFQRMGK 457
           MQ + + P+  + + ++S                  ++N  E+E       VD++ + G 
Sbjct: 370 MQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGS 429

Query: 458 ND----------KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
            D          K  RNTA WNS++AGY   G K  +   F +M  S    + +T+++++
Sbjct: 430 MDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIV 489

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
                                    + L +  +L+D Y+K G I  +RT+FD M+ K+I+
Sbjct: 490 -------------------------NLLVLETALVDMYSKCGAITKARTVFDNMNGKNIV 524

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
           +WN++I GY  HG    AL L+++M   G+ PN  TFL+I+ A S  G+V+ G ++F S+
Sbjct: 525 SWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSM 584

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
            E Y I    EHY+ M+DL GR+G+LE+A EF+E MPIEP+ S W ALL ACR+H ++D+
Sbjct: 585 QEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDM 644

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
             LA +RLF+L+P +     ++  IYA  G+ ++   +R++ +    +   G  WIE+ +
Sbjct: 645 GRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINS 704

Query: 748 LVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEE----EEKEEISGI----- 798
            +  F  G  +   ++ +Y+ L+    ++T +S   G   +     +  ++I        
Sbjct: 705 EIQIFHAGSKTHPKTEEIYNNLR----HLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEY 760

Query: 799 ---HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
              HSE+LAL+  LI S     TIR+ KN+R+C  CH   K++S +    I   D+   H
Sbjct: 761 LLQHSERLALSLGLI-SLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFH 819

Query: 856 HFKNGQCSCGDYW 868
           HF+NG+CSCGDYW
Sbjct: 820 HFENGKCSCGDYW 832



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 168/587 (28%), Positives = 293/587 (49%), Gaps = 61/587 (10%)

Query: 47  SIATQGAK-VRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKC 104
           SI T+ A  V    Y +L+Q CIDSNS    + +H   ++     D ++ TK+L +YA+ 
Sbjct: 60  SIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARS 119

Query: 105 GCLDD---AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFP 161
           GCLDD   AR++FE+M ERNL  W+ MI AY+R   + E   +F  M++ G+ PD+F F 
Sbjct: 120 GCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFA 179

Query: 162 KILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK 221
             L+ CG     + GK +HS +I  G      V N+++ +Y KC       + F+ M E+
Sbjct: 180 SALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGER 239

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKM-------------------------------- 249
           + V WNS+IS   Q G  ++A  LF +M                                
Sbjct: 240 NQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQ 299

Query: 250 -----CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFA 304
                 R  I   ++    L+  Y++ G+ + A E+  RM       + ++W  MI G+ 
Sbjct: 300 IHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAER----NAYSWNSMIEGYQ 355

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           QNG T +AL LFK+M   G+ P+  +++S +S+C  L     G E+H+  V+    ++ +
Sbjct: 356 QNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGI 415

Query: 365 VGNSLINMYSKCEELEAAERVFDMI--KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           +   L++MY+KC  ++ A +V+D    KD++   WNS++AGY   G   +++  F++M E
Sbjct: 416 LQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLE 475

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK--------RNTASWNSLIAG 474
           SD+  +V+T   +++  +    E   VD++ + G   K +        +N  SWN++I+G
Sbjct: 476 SDIEYDVLTMVTIVNLLVL---ETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISG 532

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLES 533
           Y + G    AL ++ +M     YPN VT L++L AC++  +    ++         ++E+
Sbjct: 533 YSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEA 592

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
                  ++D   ++G +  ++   + M    ++ TW +L+    +H
Sbjct: 593 KAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVH 639



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 215/457 (47%), Gaps = 70/457 (15%)

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC---EELEAAE 383
           N +  +S I  C D  +   G  IH+  +  G+  D  +   ++ +Y++    ++L  A 
Sbjct: 70  NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW----------- 432
           ++F+ + ++++ +WN+MI  Y +     +A+ +F +M +  V P+  T+           
Sbjct: 130 KLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALR 189

Query: 433 ------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                                   N LI  Y +  +E+  + +F  MG     +RN  +W
Sbjct: 190 SRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMG-----ERNQVTW 244

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSS--CFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           NS+I+   Q G  N+AL +F +MQ S     P+  T  ++L  CA     N+ ++IH  +
Sbjct: 245 NSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHL 304

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           +R ++  ++ V   L+  Y++ G + Y++ IF+ M+ ++  +WNS+I GY  +G    AL
Sbjct: 305 IRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEAL 364

Query: 587 DLFDQMKSFGLKPNRGTFLSII-----LAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
            LF QM+  G+KP+  +  S++     L+ S  G  +L   +  +  E   I+ ++    
Sbjct: 365 RLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGR-ELHNFIVRNTMEEEGILQVV---- 419

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPD--SSIWEALLTACRIHG------NIDLAVLAIE 693
            ++D+Y + G ++ A + + D  I+ D  +++W ++L      G      N  L +L  +
Sbjct: 420 -LVDMYAKCGSMDYAWK-VYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESD 477

Query: 694 RLFDLEPGDVLIQRLILQ-----IYAICGKPEDALKV 725
             +D+     ++  L+L+     +Y+ CG    A  V
Sbjct: 478 IEYDVLTMVTIVNLLVLETALVDMYSKCGAITKARTV 514



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 165/367 (44%), Gaps = 39/367 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           NG   EA+ +   +   G K    +  ++L +C+  +     R+LH F+   T E +  +
Sbjct: 357 NGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGIL 416

Query: 94  KTKLLSVYAKCGCLDDAREVFEDM--RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           +  L+ +YAKCG +D A +V++    ++RN   W++++  Y+     +E    F  M++ 
Sbjct: 417 QVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLE- 475

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
                               D E   L    ++ L +     +  +++ +Y KCG +  A
Sbjct: 476 -------------------SDIEYDVLTMVTIVNLLV-----LETALVDMYSKCGAITKA 511

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R  F++M+ K+ V+WN+MISGY + G + EA  L+++M ++ +    VTF  ++ + +  
Sbjct: 512 RTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHT 571

Query: 272 GQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  +  + +   M E   I      +TCM+    + GR   A +  ++M    + P   T
Sbjct: 572 GLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMP---IEPEVST 628

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI---NMYSKCEELEAAERVFD 387
             + + AC   K + MG     LA +  F  D       +   N+Y+     +  E +  
Sbjct: 629 WGALLGACRVHKDMDMG----RLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQ 684

Query: 388 MIKDKDV 394
           M+K K V
Sbjct: 685 MMKMKGV 691


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 272/924 (29%), Positives = 446/924 (48%), Gaps = 98/924 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQAC--IDSNSIHLARKLHAFL-NLVTEIDV 91
           NG   EA+  L  +  +G    +  ++++L+AC  I S  I   R++H  +  L   +D 
Sbjct: 80  NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139

Query: 92  FVKTKLLSVYAKC-GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            V   L+S+Y KC G +  A   F D+  +N  +W+++I  YS+    R    +F  M  
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199

Query: 151 DGLFPDDFLFPKILQ-ACG-NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           DG  P ++ F  ++  AC     D    + +   + K G+     V + +++ + K G L
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------- 249
            +AR+ F  M+ ++ V  N ++ G  +    +EA +LF  M                   
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFP 319

Query: 250 ---CREEIKL-------------GVVTF-----NILIRSYNQLGQCDVAMEMVKRMESLG 288
                EE+ L             G+V F     N L+  Y + G    A    +R+    
Sbjct: 320 EYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADA----RRVFYFM 375

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
              D  +W  MI+G  QNG   +A++ +K M    ++P   T+ S++S+C  LK   +G 
Sbjct: 376 TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           +IH  ++K+G   +V V N+L+ +Y++   L    ++F  + + D  SWNS+I    ++ 
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSE 495

Query: 409 YC-GKAYELFIKMQESDVPPNVITW----------------------------------- 432
               +A   F+  Q +    N IT+                                   
Sbjct: 496 RSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTE 555

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           N LI+ Y + G  D    +F RM +    +R+  +WNS+I+GY        AL +   M 
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAE----RRDNVTWNSMISGYIHNELLAKALDLVWFML 611

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
            +    +     +VL A A +    +  E+H C +R  LES + V ++L+D Y+K G + 
Sbjct: 612 QTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLD 671

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG-LKPNRGTFLSIILAH 611
           Y+   F+ M  ++  +WNS+I GY  HG    AL LF+ MK  G   P+  TF+ ++ A 
Sbjct: 672 YALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSAC 731

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
           S AG+++ G K F S+++ Y + P IEH+S M D+ GR+G+L++  +FIE MP++P+  I
Sbjct: 732 SHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLI 791

Query: 672 WEALLTAC-RIHG-NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLE 729
           W  +L AC R +G   +L   A E LF LEP + +   L+  +YA  G+ ED +K RK  
Sbjct: 792 WRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKM 851

Query: 730 RENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--TARSSHSGLCI 787
           ++   +   G  W+ +K+ V+ FV G  S   +D++Y  L+ +   +        +G  +
Sbjct: 852 KDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFAL 911

Query: 788 ---EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
              E+E KEEI   HSEKLA+AF L     +   IRI+KN+R+C  CH   KY+S +   
Sbjct: 912 YDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGR 971

Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
           +I L DS   HHF++G CSC D+W
Sbjct: 972 QIILRDSNRFHHFQDGACSCSDFW 995



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 199/746 (26%), Positives = 344/746 (46%), Gaps = 92/746 (12%)

Query: 61  INLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
           ++ +Q+C+       AR  H+ L     + DV++   L++ Y + G    AR+VF++M  
Sbjct: 7   LSFVQSCVGHRGA--ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA--GK 177
           RN  +W+ ++  YSR+   +E +     MV++G+F + + F  +L+AC   G      G+
Sbjct: 65  RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKC-GKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
            +H L+ KL  +    V N ++++Y KC G + +A   F  ++ K+ V+WNS+IS Y Q 
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM--EMVKRMESLGITPDVF 294
           G+   A R+F  M  +  +    TF  L+ +   L + DV +  +++  ++  G+  D+F
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244

Query: 295 TWTCMISGFAQNGRTSQALDLFKEM--------------------------------SFV 322
             + ++S FA++G  S A  +F +M                                S +
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMI 304

Query: 323 GVMPNG-VTITSAIS--ACTDLKALAMGMEIHSLAVKMGFTDDVL-VGNSLINMYSKCEE 378
            V P   V + S+    +  +   L  G E+H   +  G  D ++ +GN L+NMY+KC  
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP----------- 427
           +  A RVF  + DKD  SWNSMI G  Q G   +A E +  M+  D+ P           
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424

Query: 428 ------------------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
                                   NV   N L++ Y + G  +E   +F  M ++D+V  
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQV-- 482

Query: 464 NTASWNSLIAGYQQLGQK-NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
              SWNS+I    +  +    A+  F   Q +    N +T  SVL A + L      K+I
Sbjct: 483 ---SWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI 539

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS-KDIITWNSLICGYVLHGF 581
           HG  L+ ++       N+LI  Y K G +     IF  M+  +D +TWNS+I GY+ +  
Sbjct: 540 HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNEL 599

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF-CSITECYQIIPMIEHY 640
              ALDL   M   G + +   + +++ A +    ++ G +V  CS+  C +   ++   
Sbjct: 600 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG-- 657

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE--RLFDL 698
           SA++D+Y + G+L+ A+ F   MP+  +S  W ++++    HG  + A+   E  +L   
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQGEEALKLFETMKLDGQ 716

Query: 699 EPGDVLIQRLILQIYAICGKPEDALK 724
            P D +    +L   +  G  E+  K
Sbjct: 717 TPPDHVTFVGVLSACSHAGLLEEGFK 742



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 3/121 (2%)

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           NCV  LS + +C  +      +  H  + +  L+  + + N+LI+ Y ++G+ V +R +F
Sbjct: 3   NCVP-LSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVF 59

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           D M  ++ ++W  ++ GY  +G    AL     M   G+  N+  F+S++ A    G V 
Sbjct: 60  DEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVG 119

Query: 619 L 619
           +
Sbjct: 120 I 120


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 254/870 (29%), Positives = 420/870 (48%), Gaps = 111/870 (12%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
            LL A +   ++  AR+L   L  +   +V     +L+ Y K G L DA E+F  M  R+
Sbjct: 44  TLLHAYLSCGALPDARRL--LLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARD 101

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMH 180
           + +W+ ++  Y + Q++   +E F  M + G   P+ F F   +++CG  G+      + 
Sbjct: 102 VASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLL 161

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
            +V K G      V  +++ ++V+CG +  A R F  + E      NSM+ GY +    D
Sbjct: 162 GMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVD 221

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            A  LFD M                                          DV +W  M+
Sbjct: 222 HALELFDSMPER---------------------------------------DVVSWNMMV 242

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           S  +Q+GR  +ALD+  +M   GV  +  T TS+++AC  L +L  G ++H+  ++    
Sbjct: 243 SALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPC 302

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D  V ++L+ +Y+KC   + A+ VF+ + D++  +W  +IAG+ Q G   ++ ELF +M
Sbjct: 303 IDPYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQM 362

Query: 421 Q-----------------------------------ESDVPPNVITWNVLISGYIQNGNE 445
           +                                   +S     V+  N LIS Y +  N 
Sbjct: 363 RAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNL 422

Query: 446 DEAVDLFQRMGKNDKVK--------------------------RNTASWNSLIAGYQQLG 479
             A  +F+ M + D V                           +N  +WN+++  Y Q G
Sbjct: 423 QSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHG 482

Query: 480 QKNNALGVFRKMQSSC-FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
            + + L ++  M S     P+ VT +++   CA L A+    +I G  ++  L     V 
Sbjct: 483 AEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVA 542

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           N++I  Y+K G I+ +R +FD ++ KDI++WN++I GY  HG    A+++FD +   G K
Sbjct: 543 NAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAK 602

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           P+  ++++++   S +G+V  GK  F  +   + I P +EH+S M+DL GR+G L EA +
Sbjct: 603 PDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKD 662

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
            I++MP++P + +W ALL+AC+IHGN +LA LA + +F+L+  D     L+ +IYA  GK
Sbjct: 663 LIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGK 722

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA 778
            +D+ ++RKL R+   + + G  W+EV N V+ F     S      +   L  + E +  
Sbjct: 723 SDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLDELMEKI-- 780

Query: 779 RSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
             +  G    +  + EI   HSEKLA+AF L+ S  A   I I+KN+R+C  CH   K +
Sbjct: 781 --ARLGYVRTDSPRSEIH--HSEKLAVAFGLM-SLPAWMPIHIMKNLRICGDCHTVIKLI 835

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S +   E  + D+   HHF  G CSCGDYW
Sbjct: 836 SSVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 233/492 (47%), Gaps = 43/492 (8%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           L  +GR+ EA+ ++  + ++G ++   TY + L AC   +S+   ++LHA  +  +  ID
Sbjct: 245 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCID 304

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            +V + L+ +YAKCGC  +A+ VF  + +RN   W+ +I  + +   + E VELF  M  
Sbjct: 305 PYVASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRA 364

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + +  D F    ++  C +  D   G+ +HSL +K G      V NS++++Y KC  L  
Sbjct: 365 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQS 424

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A   F  M+EKD V+W SMI+ + Q+G   +A   FD M  +     V+T+N ++ +Y Q
Sbjct: 425 AESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKN----VITWNAMLGAYIQ 480

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G  +  + M   M                                  +S   V P+ VT
Sbjct: 481 HGAEEDGLRMYNVM----------------------------------LSEKDVRPDWVT 506

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
             +    C DL A  +G +I    VK+G   D  V N++I MYSKC  +  A +VFD + 
Sbjct: 507 YVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLN 566

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
            KD+ SWN+MI GY Q G   +A E+F  + +    P+ I++  ++SG   +G   E   
Sbjct: 567 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKS 626

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            F  M +   +      ++ ++    + G    A  +  +M      P      ++L AC
Sbjct: 627 YFDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMP---MKPTAEVWGALLSAC 683

Query: 511 AYLVASNKVKEI 522
             +  +N++ E+
Sbjct: 684 K-IHGNNELAEL 694


>gi|326509061|dbj|BAJ86923.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 866

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 234/762 (30%), Positives = 383/762 (50%), Gaps = 49/762 (6%)

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           ++   W+  +   +    W   +  F  M   G+  D +   + L ACG  G    G+ +
Sbjct: 141 KDAVLWNKQVAMLAEAGDWDGAIAAFREMRARGVAADGYACARALHACGRAGRRLEGRAV 200

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H+  +++G+              V    L+                    ++G +  G +
Sbjct: 201 HAHALRVGL--------------VDAHPLV-----------------PGFLAGMYAEGAD 229

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-----SLGITPDVF 294
             A      +       GVV +N +I    +LG  D A+E+ +RM      S    P + 
Sbjct: 230 VAA---ATTVLLRTAGAGVVAWNAVIACCVRLGLVDDALELAERMARDAETSEAAEPTLA 286

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           TW  ++SG A++GR  +AL + + M   G++P+  T++S + +  +  +L  G E+H   
Sbjct: 287 TWNTVLSGCARHGRDREALAVVRRMLEQGILPDAATVSSLLKSVANSGSLGHGTEVHCFF 346

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           ++ G + D   G +L++MY+KC  L+ A+RVFD ++ +++ +WNS++AG+  AG+  +A 
Sbjct: 347 LRHGLSPDAYTGTALVDMYAKCGRLDIAQRVFDGLEHRNLATWNSLVAGHANAGHFDRAL 406

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
           EL   M+   + PNV TWN LI+GY  NG   +A+ L +++ K+  V  N  SW SLI+G
Sbjct: 407 ELVEAMKRHRIDPNVTTWNGLITGYAMNGLSSQAMLLLRQI-KSAGVAPNVVSWTSLISG 465

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS 534
               G   ++   F +MQ     P+ VT+L +L ACA L    K KE+H   LRR+ +  
Sbjct: 466 SCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLALLTKGKELHCFALRRAYDGE 525

Query: 535 LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
           + V  +LID YAK+G++  ++ +F  +  K+++  N+++ G  +HG  H A  LF  M  
Sbjct: 526 VVVSTALIDMYAKAGSLTSAKRVFGRVQGKNLVCCNAMLTGLAVHGQAHEAAALFHDMWR 585

Query: 595 FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLE 654
            GLKP+  TF +++ A    G+V    +    +   Y + P  EH++ M+DL  R G L+
Sbjct: 586 SGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMVDLLARRGYLD 645

Query: 655 EAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYA 714
           EAM FIE  P EP +S W ALLT C IHGN+DLA  A   LF LEP +      ++ +Y 
Sbjct: 646 EAMTFIERSPAEPGASSWGALLTGCAIHGNLDLAESAARHLFKLEPHNSANYLAMMSLYE 705

Query: 715 ICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDL--LYSWLQNV 772
                ++A  ++   +        G  W +    ++ F   G S  + +   +Y  +  +
Sbjct: 706 QHQMFDEAESLKYAMKARGVDARPGWSWTQAGRSIHVFEVDGGSSPHPETPEIYDEMSRL 765

Query: 773 PEN--VTARSSHSGLCIEEE----EKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIR 826
                +      +G CI  +    EKE +   H+EKLA+ + LI S ++   +R+VKN R
Sbjct: 766 VSQMRMVGYVPDTG-CIAYDVPEEEKELLLLCHTEKLAVVYGLIRSDKSRAPVRVVKNTR 824

Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           MC  CHE  K+VS +   +I L D+   HHF +G+CSC DYW
Sbjct: 825 MCRDCHEVIKHVSALCGRQIILRDASRFHHFVDGKCSCDDYW 866



 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 200/413 (48%), Gaps = 41/413 (9%)

Query: 103 KCGCLDDAREVFEDMR---------ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           + G +DDA E+ E M          E  L TW+ ++   +R  R RE + +   M++ G+
Sbjct: 257 RLGLVDDALELAERMARDAETSEAAEPTLATWNTVLSGCARHGRDREALAVVRRMLEQGI 316

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD      +L++  N G    G  +H   ++ G+S       +++ +Y KCG+L  A+R
Sbjct: 317 LPDAATVSSLLKSVANSGSLGHGTEVHCFFLRHGLSPDAYTGTALVDMYAKCGRLDIAQR 376

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ ++ ++   WNS+++G+   G  D A  L + M R  I   V T+N LI  Y   G 
Sbjct: 377 VFDGLEHRNLATWNSLVAGHANAGHFDRALELVEAMKRHRIDPNVTTWNGLITGYAMNGL 436

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
              AM ++++++S G+ P+V +WT +ISG    G    +   F EM   G+ P+ VT+  
Sbjct: 437 SSQAMLLLRQIKSAGVAPNVVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLV 496

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            + AC  L  L  G E+H  A++  +  +V+V  +LI+MY+K   L +A+RVF  ++ K+
Sbjct: 497 LLRACAGLALLTKGKELHCFALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQGKN 556

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA----- 448
           +   N+M+ G    G   +A  LF  M  S + P+ IT+  L++     G   EA     
Sbjct: 557 LVCCNAMLTGLAVHGQAHEAAALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLD 616

Query: 449 ------------------VDLFQRMGKNDK----VKRNTA-----SWNSLIAG 474
                             VDL  R G  D+    ++R+ A     SW +L+ G
Sbjct: 617 DMEAKYGVAPTAEHHACMVDLLARRGYLDEAMTFIERSPAEPGASSWGALLTG 669



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 111/506 (21%), Positives = 206/506 (40%), Gaps = 82/506 (16%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           +GR  EA+ V+  +  QG      T  +LL++  +S S+    ++H F L      D + 
Sbjct: 298 HGRDREALAVVRRMLEQGILPDAATVSSLLKSVANSGSLGHGTEVHCFFLRHGLSPDAYT 357

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +YAKCG LD A+ VF+ +  RNL TW++++  ++    +   +EL   M +  +
Sbjct: 358 GTALVDMYAKCGRLDIAQRVFDGLEHRNLATWNSLVAGHANAGHFDRALELVEAMKRHRI 417

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+   +  ++           G  M+ L  +  M  +R+++++ +A  V          
Sbjct: 418 DPNVTTWNGLIT----------GYAMNGLSSQ-AMLLLRQIKSAGVAPNV---------- 456

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL-- 271
                     V+W S+ISG    G+  ++   F +M ++ I+  +VT  +L+R+   L  
Sbjct: 457 ----------VSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLAL 506

Query: 272 -----------------GQCDVA---MEMVKRMESLGITPDVFTW---------TCMISG 302
                            G+  V+   ++M  +  SL     VF             M++G
Sbjct: 507 LTKGKELHCFALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQGKNLVCCNAMLTG 566

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFTD 361
            A +G+  +A  LF +M   G+ P+G+T T+ ++AC  +  +    E +  +  K G   
Sbjct: 567 LAVHGQAHEAAALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAP 626

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDM-IKDKDVYSWNSMIAGYCQAG---YCGKAYELF 417
                  ++++ ++   L+ A    +    +    SW +++ G    G       A    
Sbjct: 627 TAEHHACMVDLLARRGYLDEAMTFIERSPAEPGASSWGALLTGCAIHGNLDLAESAARHL 686

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
            K++    P N   +  ++S Y Q+   DEA  L   M       R   SW         
Sbjct: 687 FKLE----PHNSANYLAMMSLYEQHQMFDEAESLKYAMKARGVDARPGWSWT-------- 734

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTI 503
             Q   ++ VF     S  +P    I
Sbjct: 735 --QAGRSIHVFEVDGGSSPHPETPEI 758



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 135/315 (42%), Gaps = 24/315 (7%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDV 91
           C  G   ++ T    +   G +    T + LL+AC     +   ++LH F L    + +V
Sbjct: 467 CNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLALLTKGKELHCFALRRAYDGEV 526

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            V T L+ +YAK G L  A+ VF  ++ +NL   +AM+   +   +  E   LF  M + 
Sbjct: 527 VVSTALIDMYAKAGSLTSAKRVFGRVQGKNLVCCNAMLTGLAVHGQAHEAAALFHDMWRS 586

Query: 152 GLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           GL PD   F  +L AC + G   EA + +  +  K G++        ++ +  + G L  
Sbjct: 587 GLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMVDLLARRGYLDE 646

Query: 211 ARRFFE-SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL---GVVTFNILIR 266
           A  F E S  E    +W ++++G    G  D    L +   R   KL       +  ++ 
Sbjct: 647 AMTFIERSPAEPGASSWGALLTGCAIHGNLD----LAESAARHLFKLEPHNSANYLAMMS 702

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDV-FTWTCM---ISGFAQNGRTS---QALDLFKEM 319
            Y Q    D A  +   M++ G+     ++WT     I  F  +G +S   +  +++ EM
Sbjct: 703 LYEQHQMFDEAESLKYAMKARGVDARPGWSWTQAGRSIHVFEVDGGSSPHPETPEIYDEM 762

Query: 320 S-------FVGVMPN 327
           S        VG +P+
Sbjct: 763 SRLVSQMRMVGYVPD 777



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 58/299 (19%), Positives = 117/299 (39%), Gaps = 54/299 (18%)

Query: 449 VDLFQRMGKNDKVKRNTAS-----------WNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
            DL +R+G+    +R  A            WN  +A   + G  + A+  FR+M++    
Sbjct: 116 ADLLERLGRGASGRRLLAEGDGDDWKDAVLWNKQVAMLAEAGDWDGAIAAFREMRARGVA 175

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS-LIDTYAKSGNIVYSRT 556
            +       L AC       + + +H   LR  L  + P++   L   YA+  ++  + T
Sbjct: 176 ADGYACARALHACGRAGRRLEGRAVHAHALRVGLVDAHPLVPGFLAGMYAEGADVAAATT 235

Query: 557 IF------------------------------------DGMSSK----DIITWNSLICGY 576
           +                                     D  +S+     + TWN+++ G 
Sbjct: 236 VLLRTAGAGVVAWNAVIACCVRLGLVDDALELAERMARDAETSEAAEPTLATWNTVLSGC 295

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
             HG    AL +  +M   G+ P+  T  S++ + + +G +  G +V C     + + P 
Sbjct: 296 ARHGRDREALAVVRRMLEQGILPDAATVSSLLKSVANSGSLGHGTEVHCFFLR-HGLSPD 354

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
               +A++D+Y + G+L+ A    + +    + + W +L+      G+ D A+  +E +
Sbjct: 355 AYTGTALVDMYAKCGRLDIAQRVFDGLE-HRNLATWNSLVAGHANAGHFDRALELVEAM 412


>gi|347954472|gb|AEP33736.1| chlororespiratory reduction 21, partial [Raphanus sativus]
          Length = 806

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 237/781 (30%), Positives = 404/781 (51%), Gaps = 52/781 (6%)

Query: 18  KKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLAR 77
           +  NP F    +  LC NG + EA++++  +  +  ++    Y  +LQ C+     H  R
Sbjct: 7   QPRNPYFH--RVSSLCKNGEIREALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGR 64

Query: 78  KLHAFLNLVTEI---DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
           ++HA +    E    + +++TKL+  YAKC   + A  +F  +R RN+++W+A+IG   R
Sbjct: 65  QIHARILKNGEFYAKNEYIETKLVIFYAKCDAHEIAETLFSKLRVRNVFSWAAIIGVKCR 124

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM--SCVR 192
                  +  F  M++D +FPD+F+ P + +ACG       G+ +H  V K G+   CV 
Sbjct: 125 VGLAEGALMGFVEMLKDEIFPDNFVVPNVCKACGALQWSGFGRGIHGYVAKSGLYGDCVF 184

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
            V +S+  +Y KCG L  AR+ F+ + E++ VAWN+++ GY Q G N+EA RL   M  E
Sbjct: 185 -VASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREE 243

Query: 253 EIKLGVVTF-------------------------------NILIRS----YNQLGQCDVA 277
            ++   VT                                NIL  S    Y ++G  + A
Sbjct: 244 GVEPTRVTVSTCLSASANMCGVGEGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLIEYA 303

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
             +  RM    I  DV TW  +ISG+ Q G    A+ + K M    +  + VT+++ +SA
Sbjct: 304 EMVFDRM----IGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSA 359

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
               +   +G E+    ++  F  D+ + +++I+MY+KC  +  A+RVFD    KD+  W
Sbjct: 360 AARTQNSKLGKEVQCYCIRHSFESDIGLASTVIDMYAKCGSIVDAKRVFDSTVQKDLILW 419

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
           N+++A Y ++G  G+A  LF +MQ   VPPN ITWN++I    +NG  DEA ++F +M +
Sbjct: 420 NTLLAAYAESGLSGEALRLFYEMQLESVPPNAITWNLIILSLFRNGQVDEAKEMFLQM-Q 478

Query: 458 NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASN 517
           +  +     SW +++ G  Q G    A+   RKMQ S   PN  +I   L ACA L + +
Sbjct: 479 SSGIVPTLVSWTTMMNGLVQNGCSEEAVHYLRKMQESGLRPNVFSITVALSACANLASLH 538

Query: 518 KVKEIHGCVLRRSLESS-LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
             + +HG ++R  L SS + +  +LID YAK G+I  +  +F   S  ++  +N++I  Y
Sbjct: 539 LGRSVHGYIIRNQLHSSSVSIETALIDMYAKCGDISKAEKVFKRKSYSELPLFNAMISAY 598

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
            L G    A+DL+  ++  G+KP+  TF +++ A + AG ++   ++F  +   + + P 
Sbjct: 599 ALSGNVKEAIDLYRSLEDMGIKPDNITFTNVLSACNHAGDINQAIEIFSDMVSKHGMEPC 658

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF 696
           +EHY  M+DL   +G+ E+A+  +E+MP +PD+ + ++LL  C      +L      +L 
Sbjct: 659 LEHYGLMVDLLASAGETEKALRLMEEMPYKPDARMIQSLLVTCNEEHKTELVDYLSRQLL 718

Query: 697 DLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL---VYTFV 753
           + EP +      I   YA  G  ++ +K+R++ ++   +   G  WI++K     V+ FV
Sbjct: 719 ESEPDNSGNYVTISNAYAGEGSWDEVVKMREMMKDKGLKKKPGCSWIQIKGXXEEVHVFV 778

Query: 754 T 754
            
Sbjct: 779 A 779


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 263/884 (29%), Positives = 430/884 (48%), Gaps = 94/884 (10%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           LL     + S+     +HA L L + +    +  LLS Y+KC     AR VF+++ +   
Sbjct: 10  LLTRYAATQSLLQGAHIHAHL-LKSGLFAVFRNHLLSFYSKCRLPGSARRVFDEIPDPCH 68

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            +WS+++ AYS +   R+ +  F  M    +  ++F+ P +L+   + G    G  +H+L
Sbjct: 69  VSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKCAPDAG---FGTQLHAL 125

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF-ESMDEKDGVAWNSMISGYFQIGENDE 241
            +  G+     V N+++A+Y   G +  AR  F E+  E++ V+WN ++S Y +      
Sbjct: 126 AMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSH 185

Query: 242 AHRLFDKMC-----------------------------------REEIKLGVVTFNILIR 266
           A ++F +M                                    R      V T N L+ 
Sbjct: 186 AVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVD 245

Query: 267 SYNQLGQCDVAMEMVKRMESLGITP--DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
            Y++LG  D+ M  V      G  P  DV +W   ISG   +G    AL+L  +M   G+
Sbjct: 246 MYSKLG--DIRMAAV----VFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGL 299

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
           +PN  T++S + AC    A  +G +IH   VK     D  +   L++MY+K   L+ A++
Sbjct: 300 VPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKK 359

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------ 432
           VFD I  +D+  WN++I+G        +A  LF +M++     N  T             
Sbjct: 360 VFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEA 419

Query: 433 -----------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
                                  N LI  Y +    + A  +F++ G  D +     ++ 
Sbjct: 420 ISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDII-----AFT 474

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           S+I    Q     +A+ +F +M      P+   + S+L ACA L A  + K++H  +++R
Sbjct: 475 SMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
              S +   N+L+ TYAK G+I  +   F G+  K +++W+++I G   HG    ALD+F
Sbjct: 535 QFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVF 594

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            +M    + PN  T  S++ A + AG+VD  K+ F S+ E + I    EHY+ MIDL GR
Sbjct: 595 HRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGR 654

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +GKL++AME +  MP + ++++W ALL A R+H + +L  LA E+LF LEP       L+
Sbjct: 655 AGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTHVLL 714

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
              YA  G  +D  KVRKL +++  +      W+E+K+ V+TF+ G  S   +  +Y+ L
Sbjct: 715 ANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIYAKL 774

Query: 770 QNVPENVTARSSHSGL-----CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
             + + +T       +      +++ EKE +   HSE+LA+AFALI S+ A   IR+ KN
Sbjct: 775 DELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALI-STPAGAPIRVKKN 833

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +R+C  CH   K++S +   EI + D    HHF++G CSC DYW
Sbjct: 834 LRICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 221/489 (45%), Gaps = 32/489 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N R + A+ V   +   G +     +  ++ AC  S  +   RK+HA  +    + DVF 
Sbjct: 180 NDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFT 239

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y+K G +  A  VF  + E ++ +W+A I         +  +EL   M   GL
Sbjct: 240 ANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGL 299

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+ F    IL+AC   G F  G+ +H  ++K        +   ++ +Y K G L  A++
Sbjct: 300 VPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKK 359

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ + ++D V WN++ISG     ++ EA  LF +M +E   +   T   +++S   L  
Sbjct: 360 VFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEA 419

Query: 274 CDVAMEMVKRMESLGI-------------------------------TPDVFTWTCMISG 302
                ++    E LG                                + D+  +T MI+ 
Sbjct: 420 ISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITA 479

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
            +Q      A+ LF EM   G+ P+   ++S ++AC  L A   G ++H+  +K  F  D
Sbjct: 480 LSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSD 539

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V  GN+L+  Y+KC  +E A+  F  + +K V SW++MI G  Q G+  +A ++F +M +
Sbjct: 540 VFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVD 599

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
             + PN IT   ++      G  DEA   F  M +   ++R    +  +I    + G+ +
Sbjct: 600 EHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLD 659

Query: 483 NALGVFRKM 491
           +A+ +   M
Sbjct: 660 DAMELVNSM 668


>gi|326516644|dbj|BAJ92477.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518576|dbj|BAJ88317.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 867

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 234/762 (30%), Positives = 383/762 (50%), Gaps = 49/762 (6%)

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           ++   W+  +   +    W   +  F  M   G+  D +   + L ACG  G    G+ +
Sbjct: 142 KDAVLWNKQVAMLAEAGDWDGAIAAFREMRARGVAADGYACARALHACGRAGRRLEGRAV 201

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H+  +++G+              V    L+                    ++G +  G +
Sbjct: 202 HAHALRVGL--------------VDAHPLV-----------------PGFLAGMYAEGAD 230

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-----SLGITPDVF 294
             A      +       GVV +N +I    +LG  D A+E+ +RM      S    P + 
Sbjct: 231 VAA---ATTVLLRTAGAGVVAWNAVIACCVRLGLVDDALELAERMARDAETSEAAEPTLA 287

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           TW  ++SG A++GR  +AL + + M   G++P+  T++S + +  +  +L  G E+H   
Sbjct: 288 TWNTVLSGCARHGRDREALAVVRRMLEQGILPDAATVSSLLKSVANSGSLGHGTEVHCFF 347

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           ++ G + D   G +L++MY+KC  L+ A+RVFD ++ +++ +WNS++AG+  AG+  +A 
Sbjct: 348 LRHGLSPDAYTGTALVDMYAKCGRLDIAQRVFDGLEHRNLATWNSLVAGHANAGHFDRAL 407

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
           EL   M+   + PNV TWN LI+GY  NG   +A+ L +++ K+  V  N  SW SLI+G
Sbjct: 408 ELVEAMKRHRIDPNVTTWNGLITGYAMNGLSSQAMLLLRQI-KSAGVAPNVVSWTSLISG 466

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS 534
               G   ++   F +MQ     P+ VT+L +L ACA L    K KE+H   LRR+ +  
Sbjct: 467 SCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLALLTKGKELHCFALRRAYDGE 526

Query: 535 LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
           + V  +LID YAK+G++  ++ +F  +  K+++  N+++ G  +HG  H A  LF  M  
Sbjct: 527 VVVSTALIDMYAKAGSLTSAKRVFGRVQGKNLVCCNAMLTGLAVHGQAHEAAALFHDMWR 586

Query: 595 FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLE 654
            GLKP+  TF +++ A    G+V    +    +   Y + P  EH++ M+DL  R G L+
Sbjct: 587 SGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMVDLLARRGYLD 646

Query: 655 EAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYA 714
           EAM FIE  P EP +S W ALLT C IHGN+DLA  A   LF LEP +      ++ +Y 
Sbjct: 647 EAMAFIERSPAEPGASSWGALLTGCAIHGNLDLAESAARHLFKLEPHNSANYLAMMSLYE 706

Query: 715 ICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDL--LYSWLQNV 772
                ++A  ++   +        G  W +    ++ F   G S  + +   +Y  +  +
Sbjct: 707 QHQMFDEAESLKYAMKARGVDARPGWSWTQAGRSIHVFEVDGGSSPHPETPEIYDEMSRL 766

Query: 773 PEN--VTARSSHSGLCIEEE----EKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIR 826
                +      +G CI  +    EKE +   H+EKLA+ + LI S ++   +R+VKN R
Sbjct: 767 VSQMRMVGYVPDTG-CIAYDVPEEEKELLLLCHTEKLAVVYGLIRSDKSRAPVRVVKNTR 825

Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           MC  CHE  K+VS +   +I L D+   HHF +G+CSC DYW
Sbjct: 826 MCRDCHEVIKHVSALCGRQIILRDASRFHHFVDGKCSCDDYW 867



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 200/413 (48%), Gaps = 41/413 (9%)

Query: 103 KCGCLDDAREVFEDMR---------ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           + G +DDA E+ E M          E  L TW+ ++   +R  R RE + +   M++ G+
Sbjct: 258 RLGLVDDALELAERMARDAETSEAAEPTLATWNTVLSGCARHGRDREALAVVRRMLEQGI 317

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD      +L++  N G    G  +H   ++ G+S       +++ +Y KCG+L  A+R
Sbjct: 318 LPDAATVSSLLKSVANSGSLGHGTEVHCFFLRHGLSPDAYTGTALVDMYAKCGRLDIAQR 377

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ ++ ++   WNS+++G+   G  D A  L + M R  I   V T+N LI  Y   G 
Sbjct: 378 VFDGLEHRNLATWNSLVAGHANAGHFDRALELVEAMKRHRIDPNVTTWNGLITGYAMNGL 437

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
              AM ++++++S G+ P+V +WT +ISG    G    +   F EM   G+ P+ VT+  
Sbjct: 438 SSQAMLLLRQIKSAGVAPNVVSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLV 497

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            + AC  L  L  G E+H  A++  +  +V+V  +LI+MY+K   L +A+RVF  ++ K+
Sbjct: 498 LLRACAGLALLTKGKELHCFALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQGKN 557

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA----- 448
           +   N+M+ G    G   +A  LF  M  S + P+ IT+  L++     G   EA     
Sbjct: 558 LVCCNAMLTGLAVHGQAHEAAALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLD 617

Query: 449 ------------------VDLFQRMGKNDK----VKRNTA-----SWNSLIAG 474
                             VDL  R G  D+    ++R+ A     SW +L+ G
Sbjct: 618 DMEAKYGVAPTAEHHACMVDLLARRGYLDEAMAFIERSPAEPGASSWGALLTG 670



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 112/506 (22%), Positives = 206/506 (40%), Gaps = 82/506 (16%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           +GR  EA+ V+  +  QG      T  +LL++  +S S+    ++H F L      D + 
Sbjct: 299 HGRDREALAVVRRMLEQGILPDAATVSSLLKSVANSGSLGHGTEVHCFFLRHGLSPDAYT 358

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +YAKCG LD A+ VF+ +  RNL TW++++  ++    +   +EL   M +  +
Sbjct: 359 GTALVDMYAKCGRLDIAQRVFDGLEHRNLATWNSLVAGHANAGHFDRALELVEAMKRHRI 418

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+   +  ++           G  M+ L  +  M  +R+++++ +A  V          
Sbjct: 419 DPNVTTWNGLIT----------GYAMNGLSSQ-AMLLLRQIKSAGVAPNV---------- 457

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL-- 271
                     V+W S+ISG    G+  ++   F +M ++ I+  +VT  +L+R+   L  
Sbjct: 458 ----------VSWTSLISGSCNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLAL 507

Query: 272 -----------------GQCDVA---MEMVKRMESLGITPDVFTW---------TCMISG 302
                            G+  V+   ++M  +  SL     VF             M++G
Sbjct: 508 LTKGKELHCFALRRAYDGEVVVSTALIDMYAKAGSLTSAKRVFGRVQGKNLVCCNAMLTG 567

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFTD 361
            A +G+  +A  LF +M   G+ P+G+T T+ ++AC  +  +    E +  +  K G   
Sbjct: 568 LAVHGQAHEAAALFHDMWRSGLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAP 627

Query: 362 DVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAG---YCGKAYELF 417
                  ++++ ++   L EA   +     +    SW +++ G    G       A    
Sbjct: 628 TAEHHACMVDLLARRGYLDEAMAFIERSPAEPGASSWGALLTGCAIHGNLDLAESAARHL 687

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
            K++    P N   +  ++S Y Q+   DEA  L   M       R   SW         
Sbjct: 688 FKLE----PHNSANYLAMMSLYEQHQMFDEAESLKYAMKARGVDARPGWSWT-------- 735

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTI 503
             Q   ++ VF     S  +P    I
Sbjct: 736 --QAGRSIHVFEVDGGSSPHPETPEI 759



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 135/315 (42%), Gaps = 24/315 (7%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDV 91
           C  G   ++ T    +   G +    T + LL+AC     +   ++LH F L    + +V
Sbjct: 468 CNGGDYQDSFTFFSEMQQDGIQPSLVTMLVLLRACAGLALLTKGKELHCFALRRAYDGEV 527

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            V T L+ +YAK G L  A+ VF  ++ +NL   +AM+   +   +  E   LF  M + 
Sbjct: 528 VVSTALIDMYAKAGSLTSAKRVFGRVQGKNLVCCNAMLTGLAVHGQAHEAAALFHDMWRS 587

Query: 152 GLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           GL PD   F  +L AC + G   EA + +  +  K G++        ++ +  + G L  
Sbjct: 588 GLKPDGITFTALLTACRSMGLVTEAWEYLDDMEAKYGVAPTAEHHACMVDLLARRGYLDE 647

Query: 211 ARRFFE-SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL---GVVTFNILIR 266
           A  F E S  E    +W ++++G    G  D    L +   R   KL       +  ++ 
Sbjct: 648 AMAFIERSPAEPGASSWGALLTGCAIHGNLD----LAESAARHLFKLEPHNSANYLAMMS 703

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDV-FTWTCM---ISGFAQNGRTS---QALDLFKEM 319
            Y Q    D A  +   M++ G+     ++WT     I  F  +G +S   +  +++ EM
Sbjct: 704 LYEQHQMFDEAESLKYAMKARGVDARPGWSWTQAGRSIHVFEVDGGSSPHPETPEIYDEM 763

Query: 320 S-------FVGVMPN 327
           S        VG +P+
Sbjct: 764 SRLVSQMRMVGYVPD 778



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/299 (19%), Positives = 117/299 (39%), Gaps = 54/299 (18%)

Query: 449 VDLFQRMGKNDKVKRNTAS-----------WNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
            DL +R+G+    +R  A            WN  +A   + G  + A+  FR+M++    
Sbjct: 117 ADLLERLGRGASGRRLLAEGDGDDWKDAVLWNKQVAMLAEAGDWDGAIAAFREMRARGVA 176

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS-LIDTYAKSGNIVYSRT 556
            +       L AC       + + +H   LR  L  + P++   L   YA+  ++  + T
Sbjct: 177 ADGYACARALHACGRAGRRLEGRAVHAHALRVGLVDAHPLVPGFLAGMYAEGADVAAATT 236

Query: 557 IF------------------------------------DGMSSK----DIITWNSLICGY 576
           +                                     D  +S+     + TWN+++ G 
Sbjct: 237 VLLRTAGAGVVAWNAVIACCVRLGLVDDALELAERMARDAETSEAAEPTLATWNTVLSGC 296

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
             HG    AL +  +M   G+ P+  T  S++ + + +G +  G +V C     + + P 
Sbjct: 297 ARHGRDREALAVVRRMLEQGILPDAATVSSLLKSVANSGSLGHGTEVHCFFLR-HGLSPD 355

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
               +A++D+Y + G+L+ A    + +    + + W +L+      G+ D A+  +E +
Sbjct: 356 AYTGTALVDMYAKCGRLDIAQRVFDGLE-HRNLATWNSLVAGHANAGHFDRALELVEAM 413


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/617 (34%), Positives = 344/617 (55%), Gaps = 46/617 (7%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEI 350
           D   W  +++G+A+NG    A+ +   M    G  P+ VT+ S + AC D +AL    E+
Sbjct: 290 DRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREV 349

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H+ AV+ GF + V V  +++++Y KC  +++A +VFD ++D++  SWN+MI GY + G  
Sbjct: 350 HAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDA 409

Query: 411 GKAYELFIKMQESDV-----------------------------------PPNVITWNVL 435
            +A  LF +M    V                                     NV   N L
Sbjct: 410 TEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNAL 469

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           I+ Y +    D A  +F  +G   +V     SWN++I G  Q G   +A+ +F +MQ   
Sbjct: 470 ITMYCKCKRTDLAAQVFDELGYKTRV-----SWNAMILGCTQNGSSEDAVRLFSRMQLEN 524

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
             P+  T++S++PA A +    + + IHG  +R  L+  + V+ +LID YAK G +  +R
Sbjct: 525 VKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIAR 584

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
           ++F+    + +ITWN++I GY  HG    A++LF++MKS G  PN  TFLS++ A S AG
Sbjct: 585 SLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAG 644

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
           +VD G++ F S+ E Y + P +EHY  M+DL GR+GKL EA  FI+ MP+EP  S++ A+
Sbjct: 645 LVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAM 704

Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
           L AC++H N++LA  + +R+F+LEP + +   L+  IYA     +D  +VR    +   +
Sbjct: 705 LGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQ 764

Query: 736 NSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA----RSSHSGLCIEEEE 791
            + G   +++KN ++TF +G  +   +  +Y+ L  + E + A      + S   +E++ 
Sbjct: 765 KTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPDTDSIHDVEDDV 824

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           K ++   HSEKLA+A+ LI ++    TI+I KN+R+C  CH   K +S++   EI + D 
Sbjct: 825 KAQLLNTHSEKLAIAYGLIRTAPGT-TIQIKKNLRVCKDCHNATKLISLVTGREIIMRDI 883

Query: 852 KCLHHFKNGQCSCGDYW 868
           +  HHFK+G+CSCGDYW
Sbjct: 884 QRFHHFKDGKCSCGDYW 900



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 140/537 (26%), Positives = 236/537 (43%), Gaps = 43/537 (8%)

Query: 12  LHSLLTKKSNPRFRDTHLDFLCGNGRLN-----EAITVLDSIATQGAKVRRNTYINLLQA 66
           L S +T  ++    D H        R +      A   +   +  G  +R  T+ +LL+ 
Sbjct: 177 LPSPITAATHAAPDDHHARLRAAASRSDLRGALAAFAAMSPASGSGPVLR--TFTSLLKL 234

Query: 67  CIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTW 125
           C     +   R +HA L       +    T L ++YAKC    DAR VF+ M  R+   W
Sbjct: 235 CAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARDRVAW 294

Query: 126 SAMIGAYSRDQRWREVVELFFLMVQ-DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           +A++  Y+R+      V +   M + DG  PD      +L AC +     A + +H+  +
Sbjct: 295 NALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAV 354

Query: 185 KLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHR 244
           + G      V  ++L VY KCG +  AR+ F+ M +++ V+WN+MI GY + G+  EA  
Sbjct: 355 RGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALA 414

Query: 245 LFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV----------- 293
           LF +M  E + +  V+    + +  +LG  D    + + +  +G+  +V           
Sbjct: 415 LFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMNALITMYC 474

Query: 294 --------------------FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
                                +W  MI G  QNG +  A+ LF  M    V P+  T+ S
Sbjct: 475 KCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVS 534

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            I A  D+        IH  ++++    DV V  +LI+MY+KC  +  A  +F+  +D+ 
Sbjct: 535 IIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRH 594

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ 453
           V +WN+MI GY   G    A ELF +M+ S   PN  T+  ++S     G  DE  + F 
Sbjct: 595 VITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFS 654

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            M ++  ++     + +++    + G+ + A    +KM      P      ++L AC
Sbjct: 655 SMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMP---MEPGISVYGAMLGAC 708



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 136/270 (50%), Gaps = 8/270 (2%)

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALG 486
           P  +    L + Y +     +A  +F RM   D+V     +WN+L+AGY + G    A+G
Sbjct: 258 PEALAATALANMYAKCRRPGDARRVFDRMPARDRV-----AWNALVAGYARNGLAEAAVG 312

Query: 487 VFRKMQSS-CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
           +  +MQ      P+ VT++SVLPACA   A    +E+H   +R   +  + V  +++D Y
Sbjct: 313 MVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVY 372

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
            K G +  +R +FDGM  ++ ++WN++I GY  +G    AL LF +M   G+     + L
Sbjct: 373 CKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVL 432

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
           + + A    G +D G++V   +     +   +   +A+I +Y +  + + A +  +++  
Sbjct: 433 AALHACGELGFLDEGRRVHELLVR-IGLESNVNVMNALITMYCKCKRTDLAAQVFDELGY 491

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIERL 695
           +   S W A++  C  +G+ + AV    R+
Sbjct: 492 KTRVS-WNAMILGCTQNGSSEDAVRLFSRM 520



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 109/238 (45%), Gaps = 6/238 (2%)

Query: 483 NALGVFRKMQ-SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
            AL  F  M  +S   P   T  S+L  CA        + +H  +  R L        +L
Sbjct: 207 GALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATAL 266

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF-GLKPN 600
            + YAK      +R +FD M ++D + WN+L+ GY  +G   AA+ +  +M+   G +P+
Sbjct: 267 ANMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPD 326

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
             T +S++ A + A  +   ++V             +   +A++D+Y + G ++ A +  
Sbjct: 327 AVTLVSVLPACADAQALGACREVHAFAVRG-GFDEQVNVSTAILDVYCKCGAVDSARKVF 385

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
           + M  + +S  W A++     +G+   A+   +R+   E  DV    ++  ++A CG+
Sbjct: 386 DGMQ-DRNSVSWNAMIKGYAENGDATEALALFKRMVG-EGVDVTDVSVLAALHA-CGE 440


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 220/617 (35%), Positives = 346/617 (56%), Gaps = 46/617 (7%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           D   W  MI+G  +N     ++ +FK+M   GV  +  T+ + + A  +++ + +GM I 
Sbjct: 168 DTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQ 227

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY-- 409
            LA+K+GF  D  V   LI+++SKCE+++ A  +F MI+  D+ S+N++I+G+   G   
Sbjct: 228 CLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETE 287

Query: 410 CGKAY--ELFIKMQESDV-----------PPNVITWNVLISGY-------IQNGNEDEAV 449
           C   Y  EL +  Q               P   +     I G+       +Q        
Sbjct: 288 CAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALT 347

Query: 450 DLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            ++ R+ + D  +        +  A+WN++I+GY Q G    A+ +F++M ++ F PN V
Sbjct: 348 TIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPV 407

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           TI S+L ACA L A +  K +H  +  ++LE ++ V  +LID YAK GNI  +  +FD  
Sbjct: 408 TITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLT 467

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
           S K+ +TWN++I GY LHG+   AL LF++M   G +P+  TFLS++ A S AG+V  G 
Sbjct: 468 SEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGD 527

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
           ++F ++   Y+I P+ EHY+ M+D+ GR+G+LE+A+EFI  MP+EP  ++W  LL AC I
Sbjct: 528 EIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMI 587

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H + +LA +A ERLF+L+PG+V    L+  IY++      A  VR+  ++     + G  
Sbjct: 588 HKDTNLARVASERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCT 647

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQNV----------PENVTARSSHSGLCIEEEE 791
            IEV    + FV G  S S +  +Y+ L+ +           E VTA        +EEEE
Sbjct: 648 LIEVNGTPHVFVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHD-----VEEEE 702

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           KE +  +HSEKLA+AF LI +++    IRI+KN+R+C+ CH   K++S +    I + D+
Sbjct: 703 KELMFNVHSEKLAIAFGLI-TTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDA 761

Query: 852 KCLHHFKNGQCSCGDYW 868
              HHFK+G CSCGDYW
Sbjct: 762 NRFHHFKDGICSCGDYW 778



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 215/464 (46%), Gaps = 33/464 (7%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           TY   + A  D N + +    HA ++   + ++FV + L+ +Y K   +  AR+VF+ M 
Sbjct: 108 TYAFAISASPDDN-LGMCLHAHAVVDGF-DSNLFVASALVDLYCKFSRVAYARKVFDKMP 165

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           +R+   W+ MI    R+  + + V++F  MV  G+  D      +L A     + + G  
Sbjct: 166 DRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMG 225

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +  L +KLG      V   +++V+ KC  +  AR  F  + + D V++N++ISG+   GE
Sbjct: 226 IQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGE 285

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA--------------------- 277
            + A + F ++     ++   T   LI   +  G   +A                     
Sbjct: 286 TECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTA 345

Query: 278 -MEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
              +  R+  + +   +F          W  MISG+AQ+G T  A+ LF+EM      PN
Sbjct: 346 LTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPN 405

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            VTITS +SAC  L AL+ G  +H L        ++ V  +LI+MY+KC  +  A ++FD
Sbjct: 406 PVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFD 465

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
           +  +K+  +WN+MI GY   GY  +A +LF +M      P+ +T+  ++      G   E
Sbjct: 466 LTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVRE 525

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
             ++F  M    +++     +  ++    + GQ   AL   RKM
Sbjct: 526 GDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKM 569



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 138/594 (23%), Positives = 247/594 (41%), Gaps = 80/594 (13%)

Query: 55  VRRNTYINLL-QACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREV 113
           + RNT + L+ +AC      HLA      +    + D+   TKL       G    AR +
Sbjct: 6   ISRNTLLALISKACTFP---HLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARAL 62

Query: 114 FEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF 173
           F  + + +++ ++ +I  +S       +     L+    L PD+F +   + A     D 
Sbjct: 63  FFSVPKPDIFLFNVLIKGFSFSPDASSISFYTHLLKNTTLSPDNFTYAFAISA---SPDD 119

Query: 174 EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
             G  +H+  +  G      V ++++ +Y K  ++ +AR+ F+ M ++D V WN+MI+G 
Sbjct: 120 NLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGL 179

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI---- 289
            +    D++ ++F  M  + ++L   T   ++ +  ++ +  V M +      LG     
Sbjct: 180 VRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDD 239

Query: 290 ---------------------------TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
                                       PD+ ++  +ISGF+ NG T  A+  F+E+   
Sbjct: 240 YVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVS 299

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           G   +  T+   I   +    L +   I    VK G      V  +L  +YS+  E++ A
Sbjct: 300 GQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLA 359

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG---- 438
            ++FD   +K V +WN+MI+GY Q+G    A  LF +M  ++  PN +T   ++S     
Sbjct: 360 RQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQL 419

Query: 439 -------------------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTAS 467
                                          Y + GN  EA  LF         ++NT +
Sbjct: 420 GALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTS-----EKNTVT 474

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI-HGCV 526
           WN++I GY   G  + AL +F +M    F P+ VT LSVL AC++     +  EI H  V
Sbjct: 475 WNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMV 534

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
            +  +E        ++D   ++G +  +      M        W +L+   ++H
Sbjct: 535 NKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIH 588



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 140/310 (45%), Gaps = 6/310 (1%)

Query: 31  FLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEI 89
           F C NG    A+     +   G +V  +T + L+        +HLA  +  F +   T +
Sbjct: 280 FSC-NGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTIL 338

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
              V T L ++Y++   +D AR++F++  E+ +  W+AMI  Y++       + LF  M+
Sbjct: 339 QPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMM 398

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
                P+      IL AC   G    GK +H L+    +     V  +++ +Y KCG + 
Sbjct: 399 TTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNIS 458

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A + F+   EK+ V WN+MI GY   G  DEA +LF++M     +   VTF  ++ + +
Sbjct: 459 EASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACS 518

Query: 270 QLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
             G      E+   M     I P    + CM+    + G+  +AL+  ++M    V P  
Sbjct: 519 HAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMP---VEPGP 575

Query: 329 VTITSAISAC 338
               + + AC
Sbjct: 576 AVWGTLLGAC 585


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 229/646 (35%), Positives = 340/646 (52%), Gaps = 70/646 (10%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P+ F W  MI G + +     A+D +  M   GV PN  T    + +C  + A   G +I
Sbjct: 95  PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE--------------------------- 383
           H   +K+G   D  V  SLINMY++  EL  AE                           
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCL 214

Query: 384 ----RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
               R+F+ I  +D  SWN+MIAGY Q+G   +A   F +M+ ++V PN  T   ++S  
Sbjct: 215 DDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSAC 274

Query: 440 IQNGN-----------EDEA-----------VDLFQRMGKNDKVK--------RNTASWN 469
            Q+G+           ED             +D++ + G  DK +        ++  SWN
Sbjct: 275 AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWN 334

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
            +I GY  +     AL +FRKMQ S   PN VT +S+LPACAYL A +  K IH  + ++
Sbjct: 335 VMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394

Query: 530 SLE-SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
            L  ++  +  SLID YAK GNI  ++ +F GM  K + +WN++I G  +HG  + AL+L
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALEL 454

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F QM+  G +P+  TF+ ++ A S AG+V+LG++ F S+ E Y I P ++HY  MIDL G
Sbjct: 455 FRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLG 514

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+G  +EA   +++M ++PD +IW +LL ACR+HGN++L   A + LF+LEP +     L
Sbjct: 515 RAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVL 574

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  IYA  G+ +D  ++R    +   +   G   IEV ++V+ F+ G      S  +Y  
Sbjct: 575 LSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQSQDIYKM 634

Query: 769 LQNVPENVTARSSHSGLCIE------EEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
           L  + + +  ++ H     E      EE KE     HSEKLA+AF LI S++   TIRIV
Sbjct: 635 LDEI-DQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFGLI-STKPETTIRIV 692

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN+R+C +CH   K +S + + EI   D    HHFK+G CSC DYW
Sbjct: 693 KNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 216/490 (44%), Gaps = 80/490 (16%)

Query: 92  FVKTKLLSVYA--KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           F  +KL+   A    G L  A  +FE + + N + W+ MI   S        ++ +  M+
Sbjct: 65  FALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRML 124

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             G+ P+ + FP +L++C   G  + GK +H  V+KLG+     V  S++ +Y + G+L 
Sbjct: 125 LCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELG 184

Query: 210 W-------------------------------ARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +                               ARR FE +  +D V+WN+MI+GY Q G 
Sbjct: 185 YAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGR 244

Query: 239 NDEAHRLFDKMCREEIKLGVVTF-----------------------------------NI 263
            +EA   F +M R  +     T                                    N 
Sbjct: 245 FEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNA 304

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGI-TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
           LI  Y++ G  D A ++ +     GI   D+ +W  MI G++      +AL LF++M   
Sbjct: 305 LIDMYSKCGDLDKARDLFE-----GICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQS 359

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVK--MGFTDDVLVGNSLINMYSKCEELE 380
            V PN VT  S + AC  L AL +G  IH+   K  +G T+  L   SLI+MY+KC  +E
Sbjct: 360 NVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSL-WTSLIDMYAKCGNIE 418

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
           AA++VF  +K K + SWN+MI+G    G+   A ELF +M++    P+ IT+  ++S   
Sbjct: 419 AAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACS 478

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
             G  +     F  M ++  +      +  +I    + G  + A  + + M+     P+ 
Sbjct: 479 HAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNME---MKPDG 535

Query: 501 VTILSVLPAC 510
               S+L AC
Sbjct: 536 AIWGSLLGAC 545



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 123/488 (25%), Positives = 210/488 (43%), Gaps = 73/488 (14%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCG----- 105
           G +    T+  LL++C    +    +++H   L L  E D FV T L+++YA+ G     
Sbjct: 127 GVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYA 186

Query: 106 --------------------------CLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
                                     CLDDAR +FE++  R+  +W+AMI  Y++  R+ 
Sbjct: 187 ELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFE 246

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E +  F  M +  + P++     +L AC   G  E G  + S +   G+    R+ N+++
Sbjct: 247 EALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALI 306

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +Y KCG L  AR  FE + EKD ++WN MI GY  +    EA  LF KM +  ++   V
Sbjct: 307 DMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDV 366

Query: 260 TFNILIRSYNQLGQCDVA-----------------------MEMVKRMESLGITPDVF-- 294
           TF  ++ +   LG  D+                        ++M  +  ++     VF  
Sbjct: 367 TFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAG 426

Query: 295 -------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
                  +W  MISG A +G  + AL+LF++M   G  P+ +T    +SAC+    + +G
Sbjct: 427 MKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELG 486

Query: 348 MEIHSLAVK-MGFTDDVLVGNSLINMYSKC---EELEAAERVFDMIKDKDVYSWNSMIAG 403
            +  S  V+    +  +     +I++  +    +E EA  +  +M  D  +  W S++ G
Sbjct: 487 RQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAI--WGSLL-G 543

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
            C+     +  E   K      P N   + +L + Y   G  D+   +  R   NDK  +
Sbjct: 544 ACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARI--RTKLNDKGMK 601

Query: 464 NTASWNSL 471
                +S+
Sbjct: 602 KVPGCSSI 609



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 154/308 (50%), Gaps = 8/308 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           +GR  EA+     +         +T + +L AC  S S+ L   + +++ +     ++ +
Sbjct: 242 SGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRL 301

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y+KCG LD AR++FE + E+++ +W+ MIG YS    ++E + LF  M Q  +
Sbjct: 302 VNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNV 361

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIK--LGMSCVRRVRNSVLAVYVKCGKLIWA 211
            P+D  F  IL AC   G  + GK +H+ + K  LG++    +  S++ +Y KCG +  A
Sbjct: 362 EPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNT-SLWTSLIDMYAKCGNIEAA 420

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           ++ F  M  K   +WN+MISG    G  + A  LF +M  E  +   +TF  ++ + +  
Sbjct: 421 KQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHA 480

Query: 272 GQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  ++  +    M E   I+P +  + CMI    + G   +A  L K M    + P+G  
Sbjct: 481 GLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNME---MKPDGAI 537

Query: 331 ITSAISAC 338
             S + AC
Sbjct: 538 WGSLLGAC 545


>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g52850, chloroplastic; Flags: Precursor
 gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 893

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 251/890 (28%), Positives = 434/890 (48%), Gaps = 101/890 (11%)

Query: 56  RRNTYINLLQACI------DSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGC 106
           R N   NL ++CI      +SNS  +   +H  +    L+  +D+     LLS+Y K   
Sbjct: 16  RTNELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLC--NNLLSLYLKTDG 73

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           + +AR++F++M  R ++ W+ MI A+++ Q +   + LF  M+  G  P++F F  ++++
Sbjct: 74  IWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRS 133

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C    D   G  +H  VIK G      V +S+  +Y KCG+   A   F S+   D ++W
Sbjct: 134 CAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISW 193

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIK---------LGVVTF-----------NILIR 266
             MIS      +  EA + + +M +  +          LG  +F           NI++R
Sbjct: 194 TMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVR 253

Query: 267 S--------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
                          Y+Q  + + A   V+ + S G   DVF WT ++SGF +N R  +A
Sbjct: 254 GIPLNVVLKTSLVDFYSQFSKMEDA---VRVLNSSG-EQDVFLWTSVVSGFVRNLRAKEA 309

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
           +  F EM  +G+ PN  T ++ +S C+ +++L  G +IHS  +K+GF D   VGN+L++M
Sbjct: 310 VGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDM 369

Query: 373 YSKCEELEA-AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           Y KC   E  A RVF  +   +V SW ++I G    G+    + L ++M + +V PNV+T
Sbjct: 370 YMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVT 429

Query: 432 W-----------------------------------NVLISGYIQNGNEDEAVDLFQRMG 456
                                               N L+  Y  +   D A ++ + M 
Sbjct: 430 LSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK 489

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
           + D +     ++ SL+  + +LG+   AL V   M       + +++   + A A L A 
Sbjct: 490 RRDNI-----TYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGAL 544

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
              K +H   ++     +  V+NSL+D Y+K G++  ++ +F+ +++ D+++WN L+ G 
Sbjct: 545 ETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGL 604

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
             +GF  +AL  F++M+    +P+  TFL ++ A S   + DLG + F  + + Y I P 
Sbjct: 605 ASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQ 664

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF 696
           +EHY  ++ + GR+G+LEEA   +E M ++P++ I++ LL ACR  GN+ L      +  
Sbjct: 665 VEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGL 724

Query: 697 DLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG 756
            L P D  +  L+  +Y   GKPE A K R L  E       G+  +EV+  V++FV+  
Sbjct: 725 ALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSED 784

Query: 757 WSE-SYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALI-GSSQ 814
            +    ++ +Y+ ++++ E +    S            E +  HS K A+ +  I  S +
Sbjct: 785 VTRVDKTNGIYAEIESIKEEIKRFGS-------PYRGNENASFHSAKQAVVYGFIYASPE 837

Query: 815 APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
           AP  + +VKN  +C  CHE    ++ +   +I + D   +H FKNG+CSC
Sbjct: 838 AP--VHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/348 (21%), Positives = 148/348 (42%), Gaps = 33/348 (9%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           N R  EA+     + + G +    TY  +L  C    S+   +++H+  + +  E    V
Sbjct: 303 NLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV 362

Query: 94  KTKLLSVYAKCGCLD-DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              L+ +Y KC   + +A  VF  M   N+ +W+ +I         ++   L   MV+  
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P+      +L+AC           +H+ +++  +     V NS++  Y    K+ +A 
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
               SM  +D + + S+++ + ++G+++ A  + + M  + I++  ++    I +   LG
Sbjct: 483 NVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG 542

Query: 273 QCDV-------------------------------AMEMVKRMESLGITPDVFTWTCMIS 301
             +                                ++E  K++     TPDV +W  ++S
Sbjct: 543 ALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVS 602

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
           G A NG  S AL  F+EM      P+ VT    +SAC++ +   +G+E
Sbjct: 603 GLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLE 650


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 252/825 (30%), Positives = 423/825 (51%), Gaps = 91/825 (11%)

Query: 90  DVFVKTKLLSVYAKCGC---LDDAREVFEDMRERNL-YTWSAMIGAYSRDQRWREVVELF 145
           DV   TKL++   + G    L  A+EVFE+       + ++++I  Y+      E + LF
Sbjct: 63  DVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF 122

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M+  G+ PD + FP  L AC        G  +H L++K+G +    V+NS++  Y +C
Sbjct: 123 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 182

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR-EEIKLGVVTFNIL 264
           G+L  AR+ F+ M E++ V+W SMI GY +     +A  LF +M R EE+    VT   +
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242

Query: 265 IRSYNQLGQCDV-------------------------------AMEMVKRMESLGITPDV 293
           I +  +L   +                                A+++ KR+       ++
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
                M S + + G T +AL +F  M   GV P+ +++ SAIS+C+ L+ +  G   H  
Sbjct: 303 DLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGY 362

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            ++ GF     + N+LI+MY KC   + A R+FD + +K                     
Sbjct: 363 VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK--------------------- 401

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
                          V+TWN +++GY++NG  D A + F+ M +     +N  SWN++I+
Sbjct: 402 --------------TVVTWNSIVAGYVENGEVDAAWETFETMPE-----KNIVSWNTIIS 442

Query: 474 GYQQLGQKNNALGVFRKMQSS-CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
           G  Q      A+ VF  MQS      + VT++S+  AC +L A +  K I+  + +  ++
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ 502

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
             + +  +L+D +++ G+   + +IF+ ++++D+  W + I    + G    A++LFD M
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
              GLKP+   F+  + A S  G+V  GK++F S+ + + + P   HY  M+DL GR+G 
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQI 712
           LEEA++ IEDMP+EP+  IW +LL ACR+ GN+++A  A E++  L P       L+  +
Sbjct: 623 LEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNV 682

Query: 713 YAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
           YA  G+  D  KVR   +E   R   G   I+++   + F +G   ES+ ++    ++ +
Sbjct: 683 YASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSG--DESHPEM--PNIEAM 738

Query: 773 PENVTARSSHSG---------LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
            + V+ R+SH G         + ++E+EK  +   HSEKLA+A+ LI S++   TIRIVK
Sbjct: 739 LDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGT-TIRIVK 797

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+R+C  CH  AK+ S +++ EI L D+   H+ + G+CSCGD+W
Sbjct: 798 NLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 203/454 (44%), Gaps = 44/454 (9%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T + ++ AC     +    K++AF+ N   E++  + + L+ +Y KC  +D A+ +F++ 
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
              NL   +AM   Y R    RE + +F LM+  G+ PD       + +C    +   GK
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
             H  V++ G      + N+++ +Y+KC +   A R F+ M  K  V WNS+++GY + G
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
           E D A   F+ M  + I                                        +W 
Sbjct: 418 EVDAAWETFETMPEKNI---------------------------------------VSWN 438

Query: 298 CMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
            +ISG  Q     +A+++F  M S  GV  +GVT+ S  SAC  L AL +   I+    K
Sbjct: 439 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 498

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G   DV +G +L++M+S+C + E+A  +F+ + ++DV +W + I     AG   +A EL
Sbjct: 499 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIEL 558

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F  M E  + P+ + +   ++     G   +  ++F  M K   V      +  ++    
Sbjct: 559 FDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLG 618

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           + G    A+ +   M      PN V   S+L AC
Sbjct: 619 RAGLLEEAVQLIEDMP---MEPNDVIWNSLLAAC 649


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 261/887 (29%), Positives = 436/887 (49%), Gaps = 64/887 (7%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
            +G   E + +   +        R T   +L+ C++S  +  A  +H + + +  E DVFV
Sbjct: 705  DGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFV 764

Query: 94   KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
               L+++Y+KCG + DAR +F+ MRER++  W+ M+  Y +    +E  +LF    + GL
Sbjct: 765  SGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGL 824

Query: 154  FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS-VLAVYVKCGKLIWAR 212
             PD+F    IL       +++ GK +   V            N  V     K  + +WA 
Sbjct: 825  RPDEFSVQLILNGVSEV-NWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAG 883

Query: 213  RFFESMD----------EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
              + +++          + D V    +++      + +   ++     +  +   V   N
Sbjct: 884  DNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVAN 943

Query: 263  ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
             L+  Y+++G    A E+   M+ L    D+ +W  MIS  AQ+    ++++LF ++   
Sbjct: 944  SLVNMYSKMGCAYFAREVFNDMKHL----DLISWNSMISSCAQSSLEEESVNLFIDLLHE 999

Query: 323  GVMPNGVTITSAISACTDL-KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
            G+ P+  T+ S + AC+ L   L +  +IH  A+K G   D  V  +LI++YSK  ++E 
Sbjct: 1000 GLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEE 1059

Query: 382  AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV------- 434
            AE +F    D D+  WN+M+ GY       KA ELF  + +S    + IT          
Sbjct: 1060 AEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGC 1119

Query: 435  ----------------------------LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                        ++  YI+ G+   A  +F  +   D V     
Sbjct: 1120 LVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDV----- 1174

Query: 467  SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
            +W S+I+G    G ++ AL ++ +M+ S   P+  T  +++ A + + A  + +++H  V
Sbjct: 1175 AWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANV 1234

Query: 527  LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
            ++    S   V  SL+D YAK GNI  +  +F  M+ ++I  WN+++ G   HG    A+
Sbjct: 1235 IKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAV 1294

Query: 587  DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
            +LF  MKS G++P+R +F+ I+ A S AG+     +   S+   Y I P IEHYS ++D 
Sbjct: 1295 NLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDA 1354

Query: 647  YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
             GR+G ++EA + IE MP +  +SI  ALL ACRI G+++       RLF LEP D    
Sbjct: 1355 LGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAY 1414

Query: 707  RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
             L+  IYA   + +D    RK+ +    +   G  WI+VKN+++ FV    S   +D++Y
Sbjct: 1415 VLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIY 1474

Query: 767  SWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRI 821
              ++ + + +        +    L +E+EEKE     HSEKLA+A+ LI S+ A  TIR+
Sbjct: 1475 DKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLI-STPASTTIRV 1533

Query: 822  VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +KN+R+C  CH   KY+S +   EI L D+   HHF++G CSCGDYW
Sbjct: 1534 IKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580



 Score =  265 bits (678), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 184/671 (27%), Positives = 331/671 (49%), Gaps = 47/671 (7%)

Query: 63   LLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
            LL+  I ++++ L +  HA + +     D F+   LL++Y+KCG L  AR+VF+   ER+
Sbjct: 627  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686

Query: 122  LYTWSAMIGAY-----SRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
            L TW+A++GAY     S D   +E + LF L+              +L+ C N G   A 
Sbjct: 687  LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746

Query: 177  KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
            + +H   IK+G+     V  +++ +Y KCG++  AR  F+ M E+D V WN M+ GY Q+
Sbjct: 747  EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806

Query: 237  GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG------QCDVAMEMVKRMESLGIT 290
            G   EA +LF +  R  ++    +  +++   +++         D       ++      
Sbjct: 807  GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDN 866

Query: 291  PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
            PDVF W   +S     G    A++ F  M+ + +  + VT+   ++A      L +G ++
Sbjct: 867  PDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQV 926

Query: 351  HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
            H +AVK G   DV V NSL+NMYSK      A  VF+ +K  D+ SWNSMI+   Q+   
Sbjct: 927  HGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLE 986

Query: 411  GKAYELFIKMQESDVPPNVITW-------NVLISGY----------IQNGNEDEA----- 448
             ++  LFI +    + P+  T        + LI G           ++ GN  ++     
Sbjct: 987  EESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATT 1046

Query: 449  -VDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
             +D++ + GK         +K   + A WN+++ GY        AL +F  +  S    +
Sbjct: 1047 LIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSD 1106

Query: 500  CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
             +T+ +   AC  LV  ++ K+IH   ++   +S L V + ++D Y K G++V +  +F+
Sbjct: 1107 QITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFN 1166

Query: 560  GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
             +S+ D + W S+I G V +G    AL ++ +M+   + P+  TF ++I A S    ++ 
Sbjct: 1167 YISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQ 1226

Query: 620  GKKVFCSITECYQII-PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            G+++  ++ +   +  P +   ++++D+Y + G +E+A    + M +  + ++W A+L  
Sbjct: 1227 GRQLHANVIKLDCVSDPFVG--TSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAMLVG 1283

Query: 679  CRIHGNIDLAV 689
               HGN + AV
Sbjct: 1284 LAQHGNAEEAV 1294



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 192/428 (44%), Gaps = 55/428 (12%)

Query: 28   HLDFLCGNGRLN---------EAITVLDSIATQGAKVRRNTYINLLQAC---IDSNSIHL 75
            HLD +  N  ++         E++ +   +  +G K    T  ++L+AC   ID   +++
Sbjct: 967  HLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDG--LNI 1024

Query: 76   ARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
            +R++H        I D FV T L+ VY+K G +++A  +F++  + +L  W+AM+  Y  
Sbjct: 1025 SRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYII 1084

Query: 135  DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
                ++ +ELF L+ + G   D        +ACG     + GK +H+  IK G      V
Sbjct: 1085 GNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHV 1144

Query: 195  RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
             + +L +Y+KCG ++ A   F  +   D VAW SMISG    G  D+A R++ +M +  +
Sbjct: 1145 NSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRV 1204

Query: 255  KLGVVTFNILIRS-----------------------------------YNQLGQCDVAME 279
                 TF  LI++                                   Y + G  + A  
Sbjct: 1205 MPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYR 1264

Query: 280  MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
            + K+M    I      W  M+ G AQ+G   +A++LFK M   G+ P+ V+    +SAC+
Sbjct: 1265 LFKKMNVRNIA----LWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACS 1320

Query: 340  DLKALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN 398
                 +   E +HS+    G   ++   + L++   +   ++ A++V + +  K   S N
Sbjct: 1321 HAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASIN 1380

Query: 399  SMIAGYCQ 406
              + G C+
Sbjct: 1381 RALLGACR 1388


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 258/889 (29%), Positives = 429/889 (48%), Gaps = 114/889 (12%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           R+T   L + C+   S   +  L  + + +  + DVFV   L+++YAK   + +AR +F+
Sbjct: 122 RHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFD 181

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            M  R++  W+ M+ AY       EV+ LF    + GL PD      IL   G    FE 
Sbjct: 182 RMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFER 241

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
                          + +VR              +A + F   D+ D   WN  +S Y Q
Sbjct: 242 E--------------LEQVR-------------AYATKLFVCDDDSDVTVWNKTLSSYLQ 274

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTF---------------------------------- 261
            GE  EA   F  M +  +    +T+                                  
Sbjct: 275 AGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSV 334

Query: 262 -NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
            N  I  Y + G  + A  M  +M+ +    D+ +W  +ISG A++G    +L LF ++ 
Sbjct: 335 ANSAINMYVKAGSVNYARRMFGQMKEV----DLISWNTVISGCARSGLEECSLRLFIDLL 390

Query: 321 FVGVMPNGVTITSAISACTDLK-ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
             G++P+  TITS + AC+ L+ +  +G ++H+ A+K G   D  V  +LI++YSK  ++
Sbjct: 391 RSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKM 450

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN------ 433
           E AE +F      D+ SWN+M+ G+  +    +A  LF  M E     + IT+       
Sbjct: 451 EEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAA 510

Query: 434 -------------------------VLISG----YIQNGNEDEAVDLFQRMGKNDKVKRN 464
                                     +ISG    Y++ G    A  +F ++   D V   
Sbjct: 511 GCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDV--- 567

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             +W ++I+G  + G++  AL  + +M+ +   P+  T  +++ AC+ L A  + K+IH 
Sbjct: 568 --AWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHA 625

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
            +++ +      VM SL+D YAK GNI  +  +F  M+++ +  WN++I G   HG    
Sbjct: 626 NIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEE 685

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMI 644
           AL+ F++MKS G+ P+R TF+ ++ A S +G+     K F S+ + Y + P IEHYS ++
Sbjct: 686 ALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLV 745

Query: 645 DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVL 704
           D   R+G ++EA + +  MP E  ++++  LL ACR+ G+ +      E+LF ++P D  
Sbjct: 746 DALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSA 805

Query: 705 IQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDL 764
              L+  IYA   + E+A+  R + +    +   G  WI++KN V+ FV G  S   +DL
Sbjct: 806 AYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDL 865

Query: 765 LYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTI 819
           +Y+ ++ V      E     +  + + IEEE+KE     HSEKLA+A+ L+ +  +  T+
Sbjct: 866 IYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPST-TL 924

Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           R++KN+R+C  CH   KY+S +   EI L D+   HHF++G CSCGDYW
Sbjct: 925 RVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973



 Score =  228 bits (582), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 170/682 (24%), Positives = 309/682 (45%), Gaps = 62/682 (9%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNLVTE---IDVFVKTKLLSVYAKCGCLDDAREVFE- 115
           + ++L+  I  + + L ++ HA +  VT     D +V   L+++YAKCG L  AR++F+ 
Sbjct: 16  WFSILRHAIADSDLILGKRTHAVI--VTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDI 73

Query: 116 -DMRERNLYTWSAMIGAYSRD------QRWREVVELFFLMVQDGLFPDDFLFPKILQACG 168
               +R+L T++A++ AY+        ++  E   +F L+ Q  +         + + C 
Sbjct: 74  TPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCL 133

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
             G   A + +    +K+G+     V  +++ +Y K  ++  AR  F+ M  +D V WN 
Sbjct: 134 LYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNV 193

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
           M+  Y ++G  DE   LF    R  ++   V+   ++    +    +  +E V+   +  
Sbjct: 194 MMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKL 253

Query: 289 IT----PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
                  DV  W   +S + Q G   +A+D F++M    V  + +T    +S    L  L
Sbjct: 254 FVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHL 313

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
            +G +IH   V+ G+   V V NS INMY K   +  A R+F  +K+ D+ SWN++I+G 
Sbjct: 314 ELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGC 373

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITW-------------------------------- 432
            ++G    +  LFI +  S + P+  T                                 
Sbjct: 374 ARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLD 433

Query: 433 ----NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
                 LI  Y + G  +EA  LF      D      ASWN+++ G+        AL +F
Sbjct: 434 SFVSTALIDVYSKGGKMEEAELLFHNQDGFD-----LASWNAMMHGFTVSDNYREALRLF 488

Query: 489 RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
             M       + +T  +   A   LV   + K+IH  V++      L V++ ++D Y K 
Sbjct: 489 SLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKC 548

Query: 549 GNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
           G +  +R +F+ + S D + W ++I G V +G    AL  + QM+  G++P+  TF +++
Sbjct: 549 GEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLV 608

Query: 609 LAHSLAGMVDLGKKVFCSITECY-QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
            A SL   ++ GK++  +I +      P +   ++++D+Y + G +E+A      M    
Sbjct: 609 KACSLLTALEQGKQIHANIMKLNCAFDPFV--MTSLVDMYAKCGNIEDAYGLFRRMNTR- 665

Query: 668 DSSIWEALLTACRIHGNIDLAV 689
             ++W A++     HGN + A+
Sbjct: 666 SVALWNAMIVGLAQHGNAEEAL 687



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 208/452 (46%), Gaps = 28/452 (6%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITP----DVFTWTCMISGFAQNG------RTSQ 311
           N LI  Y + G    A ++        ITP    D+ T+  +++ +A  G      +T +
Sbjct: 52  NNLITMYAKCGSLFSARKL------FDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHE 105

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           A  +F+ +    ++    T++     C    + +    +   AVK+G   DV V  +L+N
Sbjct: 106 AFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVN 165

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           +Y+K + +  A  +FD +  +DV  WN M+  Y + G   +   LF     S + P+ ++
Sbjct: 166 IYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVS 225

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKV---KRNTASWNSLIAGYQQLGQKNNALGVF 488
              ++ G  +    +  ++  +       V     +   WN  ++ Y Q G+   A+  F
Sbjct: 226 VRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCF 285

Query: 489 RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
           R M  S    + +T + +L   A L      K+IHG V+R   +  + V NS I+ Y K+
Sbjct: 286 RDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKA 345

Query: 549 GNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
           G++ Y+R +F  M   D+I+WN++I G    G    +L LF  +   GL P++ T  S++
Sbjct: 346 GSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVL 405

Query: 609 LA-HSLAGMVDLGKKVF-CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
            A  SL     +G++V  C++     +   +   +A+ID+Y + GK+EEA E +      
Sbjct: 406 RACSSLEESYCVGRQVHTCALKAGIVLDSFVS--TALIDVYSKGGKMEEA-ELLFHNQDG 462

Query: 667 PDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
            D + W A++    +  N   A+    RLF L
Sbjct: 463 FDLASWNAMMHGFTVSDNYREAL----RLFSL 490



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/368 (23%), Positives = 165/368 (44%), Gaps = 11/368 (2%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLL 98
           EA+ +   +  +G K  + T+ N  +A      +   +++HA  + +    D+FV + +L
Sbjct: 483 EALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGIL 542

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +Y KCG +  AR+VF  +   +   W+ +I     +    + +  +  M   G+ PD++
Sbjct: 543 DMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEY 602

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
            F  +++AC      E GK +H+ ++KL  +    V  S++ +Y KCG +  A   F  M
Sbjct: 603 TFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRM 662

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
           + +    WN+MI G  Q G  +EA   F++M    +    VTF  ++ + +  G    A 
Sbjct: 663 NTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAY 722

Query: 279 EMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
           +    M+ + G+ P++  ++C++   ++ G   +A  +   M F     +     + ++A
Sbjct: 723 KNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEA---SATMYRTLLNA 779

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV--- 394
           C        G  +      M  +D       L N+Y+   + E A    +M+K  +V   
Sbjct: 780 CRVQGDKETGERVAEKLFTMDPSDSAAY-VLLSNIYAAANQWENAVSARNMMKRVNVKKE 838

Query: 395 --YSWNSM 400
             +SW  M
Sbjct: 839 PGFSWIDM 846


>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 232/776 (29%), Positives = 392/776 (50%), Gaps = 78/776 (10%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTK 96
             EAI    +++  G +  + T+  +L+AC  +   H    +H    +   E DVF+ T 
Sbjct: 108 FQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTG 167

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM-VQDGLFP 155
           L+ +Y K G LD+AR+VF+ M  +++ +W+AMI   S+     E +E+F  M +++G+ P
Sbjct: 168 LVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEP 227

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCV-RRVRNSVLAVYVKCGKLIWARRF 214
           D      +  A     D ++ K +H  V++    CV   V NS++ +Y KCG++  A + 
Sbjct: 228 DSVSILNLAPAVSRLEDVDSCKSIHGYVVR---RCVFGVVSNSLIDMYSKCGEVKLAHQI 284

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG----------------- 257
           F+ M  KD ++W +M++GY   G   E  +L D+M R+ IK+                  
Sbjct: 285 FDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDL 344

Query: 258 ------------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                             +V    ++  Y + G+   A E    +E      D+  W+  
Sbjct: 345 EKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEG----RDLVVWSAF 400

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           +S   Q G   +AL +F+EM   G+ P+   ++S +SAC ++ +  +G  +H   +K   
Sbjct: 401 LSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADM 460

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             D+ V  +L++MY++C+    A  +F+ +  KDV +WN++I G+ + G    A E+F++
Sbjct: 461 GSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLR 520

Query: 420 MQESDVPPNVITWNVLISG----------------YIQNGNEDEA------VDLFQRMGK 457
           +Q S V P+  T   L+S                  I+NG E E       +D++ + G 
Sbjct: 521 LQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGS 580

Query: 458 ----------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
                     N  VK +  SWN +IAGY   G  N A+  F +M+     PN VT +++L
Sbjct: 581 LCTAENLFHLNKHVK-DEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTIL 639

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
           PA +YL    +    H C++R    SS  + NSLID YAKSG + YS   F  M +K  I
Sbjct: 640 PAVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTI 699

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
           +WN+++ GY +HG    AL LF  M+   +  +  +++S++ A   AG++  G+ +F S+
Sbjct: 700 SWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSM 759

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
           TE + + P +EHY+ M+DL G +G  +E +  I+ MP EPD+ +W ALL AC++H N+ L
Sbjct: 760 TEKHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVKL 819

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
             +A+  L  LEP + +   ++  IYA CG+  DA + R    ++  + + G  W+
Sbjct: 820 GEIALHHLLKLEPRNAVHYIVLSDIYAQCGRWIDARRTRSNMTDHGLKKNPGYSWV 875



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 175/641 (27%), Positives = 308/641 (48%), Gaps = 85/641 (13%)

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           +L  W+++I AYSR   ++E ++ +  M   GL PD + F  +L+AC    DF  G  +H
Sbjct: 91  SLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIH 150

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
             +    + C   +   ++ +Y K G L  AR+ F+ M  KD  +WN+MISG  Q     
Sbjct: 151 QDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPC 210

Query: 241 EAHRLFDKMCREE-----------------------------------IKLGVVTFNILI 265
           EA  +F +M  EE                                      GVV+ N LI
Sbjct: 211 EALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGVVS-NSLI 269

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             Y++ G+  +A ++  +M       D  +W  M++G+  +G   + L L  EM    + 
Sbjct: 270 DMYSKCGEVKLAHQIFDQM----WVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIK 325

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
            N +++ +++ A T+ + L  G E+H+ A+++G T D++V   +++MY+KC EL+ A+  
Sbjct: 326 MNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEF 385

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP------------------ 427
           F  ++ +D+  W++ ++   QAGY G+A  +F +MQ   + P                  
Sbjct: 386 FLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSS 445

Query: 428 -----------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
                            ++     L+S Y +  +   A+ LF RM   D V     +WN+
Sbjct: 446 RLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVV-----AWNT 500

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           LI G+ + G    AL +F ++Q S   P+  T++S+L ACA L         HG +++  
Sbjct: 501 LINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNG 560

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFD-GMSSKDIITWNSLICGYVLHGFWHAALDLF 589
           +ES + V  +LID YAK G++  +  +F      KD ++WN +I GY+ +G  + A+  F
Sbjct: 561 IESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTF 620

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF-CSITECYQIIPMIEHYSAMIDLYG 648
           +QMK   ++PN  TF++I+ A S   ++        C I   +    +I   +++ID+Y 
Sbjct: 621 NQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIG--NSLIDMYA 678

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
           +SG+L  + +   +M  +   S W A+L+   +HG  ++A+
Sbjct: 679 KSGQLSYSEKCFHEMENKGTIS-WNAMLSGYAMHGQGEVAL 718



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 174/388 (44%), Gaps = 74/388 (19%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P +  W  +I  +++     +A+  ++ MS++G+ P+  T T  + ACT       G+ I
Sbjct: 90  PSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAI 149

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H          DV +G  L++MY                               C+ G+ 
Sbjct: 150 HQDIASRELECDVFIGTGLVDMY-------------------------------CKMGHL 178

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
             A ++F KM   DV     +WN +ISG  Q+ N  EA+++FQRM   + V+        
Sbjct: 179 DNARKVFDKMPGKDVA----SWNAMISGLSQSSNPCEALEIFQRMQMEEGVE-------- 226

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
                                      P+ V+IL++ PA + L   +  K IHG V+RR 
Sbjct: 227 ---------------------------PDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRC 259

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           +     V NSLID Y+K G +  +  IFD M  KD I+W +++ GYV HG +   L L D
Sbjct: 260 VFGV--VSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLD 317

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           +MK   +K N+ + ++ +LA +    ++ GK+V     +      ++   + ++ +Y + 
Sbjct: 318 EMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVV-ATPIVSMYAKC 376

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           G+L++A EF   +    D  +W A L+A
Sbjct: 377 GELKKAKEFFLSLEGR-DLVVWSAFLSA 403



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 196/486 (40%), Gaps = 58/486 (11%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVT 87
           L  L   G   EA+++   +  +G K  +    +L+ AC + +S  L + +H + +    
Sbjct: 401 LSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADM 460

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
             D+ V T L+S+Y +C     A  +F  M  +++  W+ +I  +++    R  +E+F  
Sbjct: 461 GSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLR 520

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           +   G+ PD      +L AC    D   G   H  +IK G+     V+ +++ +Y KCG 
Sbjct: 521 LQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGS 580

Query: 208 LIWARRFFE-SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----- 261
           L  A   F  +   KD V+WN MI+GY   G  +EA   F++M  E ++  +VTF     
Sbjct: 581 LCTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILP 640

Query: 262 ------------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITP 291
                                         N LI  Y + GQ   + +    ME+ G   
Sbjct: 641 AVSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKG--- 697

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI- 350
              +W  M+SG+A +G+   AL LF  M    V  + V+  S +SAC     +  G  I 
Sbjct: 698 -TISWNAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIF 756

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD--------MIKDKDVYSWNSMIA 402
            S+  K             +  Y+   +L     +FD        M  + D   W +++ 
Sbjct: 757 QSMTEKHNLEPS-------MEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALL- 808

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
           G C+     K  E+ +       P N + + VL   Y Q G   +A      M  +   K
Sbjct: 809 GACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQCGRWIDARRTRSNMTDHGLKK 868

Query: 463 RNTASW 468
               SW
Sbjct: 869 NPGYSW 874



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 113/506 (22%), Positives = 206/506 (40%), Gaps = 86/506 (16%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMD----EKDGVAWNSMISGYFQIGENDEAHRLFDKMCR 251
           NS++  Y +      A + +++M     E D   +  ++       +  E   +   +  
Sbjct: 96  NSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQDIAS 155

Query: 252 EEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQ 311
            E++  V     L+  Y ++G  D A ++  +M       DV +W  MISG +Q+    +
Sbjct: 156 RELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPG----KDVASWNAMISGLSQSSNPCE 211

Query: 312 ALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI 370
           AL++F+ M    GV P+ V+I +   A + L+ +     IH   V+       +V NSLI
Sbjct: 212 ALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFG--VVSNSLI 269

Query: 371 NMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
           +MYSKC E++ A                               +++F +M   D     I
Sbjct: 270 DMYSKCGEVKLA-------------------------------HQIFDQMWVKDD----I 294

Query: 431 TWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTAS-WNSLIAGYQQLGQKNNALGVFR 489
           +W  +++GY+ +G   E + L   M K   +K N  S  NS++A  +            R
Sbjct: 295 SWATMMAGYVHHGCYFEVLQLLDEM-KRKHIKMNKISVVNSVLAATET-----------R 342

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
            ++                         K KE+H   L+  + S + V   ++  YAK G
Sbjct: 343 DLE-------------------------KGKEVHNYALQLGMTSDIVVATPIVSMYAKCG 377

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
            +  ++  F  +  +D++ W++ +   V  G+   AL +F +M+  GLKP++    S++ 
Sbjct: 378 ELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVS 437

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDS 669
           A +      LGK + C + +   +   I   + ++ +Y R      AM     M  + D 
Sbjct: 438 ACAEISSSRLGKMMHCYVIKA-DMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYK-DV 495

Query: 670 SIWEALLTACRIHGNIDLAVLAIERL 695
             W  L+      G+  LA+    RL
Sbjct: 496 VAWNTLINGFTKCGDPRLALEMFLRL 521



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 131/294 (44%), Gaps = 45/294 (15%)

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           WNSLI  Y +L     A+  ++ M      P+  T   VL AC   +  ++   IH  + 
Sbjct: 95  WNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQDIA 154

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
            R LE  + +   L+D Y K G++  +R +FD M  KD+ +WN++I G         AL+
Sbjct: 155 SRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALE 214

Query: 588 LFDQMK-SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE--CYQIIPMIEHYSAMI 644
           +F +M+   G++P+  + L++  A S    VD  K +   +     + ++      +++I
Sbjct: 215 IFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVFGVVS-----NSLI 269

Query: 645 DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG--------------------- 683
           D+Y + G+++ A +  + M ++ D S W  ++     HG                     
Sbjct: 270 DMYSKCGEVKLAHQIFDQMWVKDDIS-WATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNK 328

Query: 684 -NIDLAVLAIERLFDLEPG--------------DVLIQRLILQIYAICGKPEDA 722
            ++  +VLA     DLE G              D+++   I+ +YA CG+ + A
Sbjct: 329 ISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKA 382



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 90/207 (43%), Gaps = 14/207 (6%)

Query: 538 MNSLIDTYAKSGNIVYSRTIF-DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           +N L+  +A+   IV   T+  + +++  +I WNSLI  Y     +  A+  +  M   G
Sbjct: 65  LNPLLQIHARL--IVQQCTLAPNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMG 122

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT----ECYQIIPMIEHYSAMIDLYGRSGK 652
           L+P++ TF  ++ A + A     G  +   I     EC   I      + ++D+Y + G 
Sbjct: 123 LEPDKYTFTFVLKACTGALDFHEGVAIHQDIASRELECDVFIG-----TGLVDMYCKMGH 177

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQI 712
           L+ A +  + MP   D + W A+++      N   A+   +R+  +E G       IL +
Sbjct: 178 LDNARKVFDKMP-GKDVASWNAMISGLSQSSNPCEALEIFQRM-QMEEGVEPDSVSILNL 235

Query: 713 YAICGKPEDALKVRKLERENTRRNSFG 739
                + ED    + +     RR  FG
Sbjct: 236 APAVSRLEDVDSCKSIHGYVVRRCVFG 262


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 244/773 (31%), Positives = 387/773 (50%), Gaps = 90/773 (11%)

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
             L H  V+K G      + N+++ VYV+ G  + AR+ F+ M +++GV W  +ISGY Q
Sbjct: 19  ANLFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQ 78

Query: 236 IGENDEAHRLFDKM------------------CREE--------------IKLG-----V 258
            G  ++A  +  +M                  C+E               I+ G     V
Sbjct: 79  NGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKV 138

Query: 259 VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
              N LI  Y + G  D A  +   M    +  D  +W  MI+G  QN     A+  +  
Sbjct: 139 AVGNGLINMYAKCGDIDHARSVFGLM----VDKDSVSWNSMITGLDQNKCFEDAVKSYNS 194

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   G+MP+   + SA+S+C  L  + +G + H   +K+G   DV V N+L+ +Y++   
Sbjct: 195 MRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSR 254

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGY-CGKAYELFIKMQESDVPPNVITW----- 432
           L   ++VF  + ++D  SWN++I     +G    +A E+F++M  +   PN +T+     
Sbjct: 255 LAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLA 314

Query: 433 ------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                         N L++ Y ++G  +   ++F RM +    +
Sbjct: 315 TVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSE----R 370

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
           R+  SWNS+I+GY        A+ +   M       +C T  +VL ACA +       E+
Sbjct: 371 RDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEV 430

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           H C +R  LES + + ++L+D Y+K G I Y+   F+ M  +++ +WNS+I GY  HG  
Sbjct: 431 HACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHG 490

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
             AL LF +MK  G  P+  TF+ ++ A S  G+VD G + F S+TE Y ++P +EHYS 
Sbjct: 491 DNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSC 550

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA-CRIHG-NIDLAVLAIERLFDLEP 700
           M+DL GR+G+L++   FI  MPI+P+  IW  +L A CR +G   +L   A E LF+++P
Sbjct: 551 MVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDP 610

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
            + +   L+  +YA  GK ED  + R+  RE   +   G  W+ +K+ V+ FV G  S  
Sbjct: 611 QNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHP 670

Query: 761 YSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQA 815
              L+Y+ L+ + + +       +   +   +E E KEE+   HSEKLA+AF L  +S  
Sbjct: 671 EKGLIYAKLKELDKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAFVLTRNSGL 730

Query: 816 PHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           P  IRI+KN+R+C  CH   KY+S +    I L DS   HHF++G+CSC DYW
Sbjct: 731 P--IRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 244/515 (47%), Gaps = 45/515 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHL-ARKLHAFL--NLVTEIDV 91
           NG   +A  VL  +  +G    R  + + ++AC +S       R++H +     + +  V
Sbjct: 79  NGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKV 138

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            V   L+++YAKCG +D AR VF  M +++  +W++MI    +++ + + V+ +  M + 
Sbjct: 139 AVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKT 198

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           GL P +F     L +C + G    G+  H   IKLG+     V N++LA+Y +  +L   
Sbjct: 199 GLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAEC 258

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGEN-DEAHRLFDKMCREEIKLGVVTF--------- 261
           ++ F  M E+D V+WN++I      G +  EA  +F +M R       VTF         
Sbjct: 259 QKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSS 318

Query: 262 --------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                                     N L+  Y + G+ +   E+  RM       D  +
Sbjct: 319 LSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSE---RRDEVS 375

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  MISG+  N    +A+DL   M   G   +  T  + +SAC  +  L  GME+H+ A+
Sbjct: 376 WNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAI 435

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           +     DV++G++L++MYSKC  ++ A R F+++  +++YSWNSMI+GY + G+   A  
Sbjct: 436 RACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALR 495

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           LF +M+ S   P+ IT+  ++S     G  DE  + F+ M +   +      ++ ++   
Sbjct: 496 LFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLL 555

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            + G+ +       KM      PN +   +VL AC
Sbjct: 556 GRAGELDKIENFINKMP---IKPNILIWRTVLGAC 587



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 152/585 (25%), Positives = 271/585 (46%), Gaps = 98/585 (16%)

Query: 69  DSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAM 128
           D+N  HL    H F     + D+F+   L++VY + G    AR++F++M +RN  TW+ +
Sbjct: 18  DANLFHLNVLKHGF-----DSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACL 72

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLG 187
           I  Y+++    +   +   M+ +G  P+ F F   ++AC     +   G+ +H   I+ G
Sbjct: 73  ISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTG 132

Query: 188 MSCVR-RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF 246
           ++  +  V N ++ +Y KCG +  AR  F  M +KD V+WNSMI+G  Q    ++A + +
Sbjct: 133 LNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSY 192

Query: 247 DKMCR-------------------------------EEIKLG----VVTFNILIRSY--- 268
           + M +                               E IKLG    V   N L+  Y   
Sbjct: 193 NSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAET 252

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT-SQALDLFKEMSFVGVMPN 327
           ++L +C       +++ S  +  D  +W  +I   A +G + S+A+++F EM   G  PN
Sbjct: 253 SRLAEC-------QKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPN 305

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            VT  + ++  + L    +  +IH+L +K    DD  + N+L+  Y K  E+E  E +F 
Sbjct: 306 RVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFS 365

Query: 388 -MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-----GYIQ 441
            M + +D  SWNSMI+GY       KA +L   M +     +  T+  ++S       ++
Sbjct: 366 RMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLE 425

Query: 442 NGNEDEA-----------------VDLFQRMGKNDKVK--------RNTASWNSLIAGYQ 476
            G E  A                 VD++ + G+ D           RN  SWNS+I+GY 
Sbjct: 426 CGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYA 485

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK-------VKEIHGCVLRR 529
           + G  +NAL +F +M+ S   P+ +T + VL AC+++   ++       + E++G V R 
Sbjct: 486 RHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPR- 544

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLI 573
                +   + ++D   ++G +       + M  K +I+ W +++
Sbjct: 545 -----VEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVL 584


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 230/725 (31%), Positives = 369/725 (50%), Gaps = 69/725 (9%)

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A R F  M EK+GV+WN++++GY Q+G+  +  +LF KM   E K    T + +++    
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 271 LG--------------------------------QCDVAMEMVKRMESLGITPDVFTWTC 298
            G                                +C    + +K    +   PDV  W+ 
Sbjct: 64  TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIR-NPDVVAWSA 122

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           MI+G  Q G   +A +LF  M   G  PN  T++S +S  T++  L  G  IH    K G
Sbjct: 123 MITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYG 182

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
           F  D LV N LI MY K   +E   +VF+ + + D+ SWN++++G+  +  CG+   +F 
Sbjct: 183 FESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFY 242

Query: 419 KMQESDVPPNVITW-NVLIS---------------GYIQNGNEDE------AVDLFQR-- 454
           +M      PN+ T+ +VL S                 I+N ++D+       VD++ +  
Sbjct: 243 QMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKAR 302

Query: 455 ------MGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
                 +  +  V R+  SW  +I+GY Q  Q   A+  FR+MQ     PN  T+ S L 
Sbjct: 303 CLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLS 362

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT 568
            C+++      +++H   ++      + V ++L+D Y K G + ++  IF G+ S+DI++
Sbjct: 363 GCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVS 422

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT 628
           WN++I GY  HG    AL+ F  M S G+ P+  TF+ ++ A S  G+V+ GKK F S++
Sbjct: 423 WNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMS 482

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
           + Y I P IEHY+ M+D+ GR+GK  E   FIE+M + P S IWE +L AC++HGN+D  
Sbjct: 483 KIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFG 542

Query: 689 VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL 748
             A ++LF++EP       L+  I+A  G+ +D   +R L      +   G  W+EV   
Sbjct: 543 EKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQ 602

Query: 749 VYTFVTGGWSESYSDLLYSWLQNVPENVTA-----RSSHSGLCIEEEEKEEISGIHSEKL 803
           V+ F++   S      +Y+ L  + +++ +     ++      +  +EK E    HSE+L
Sbjct: 603 VHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKMEHLYYHSERL 662

Query: 804 ALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCS 863
           AL+FAL+ S+ A   IRI KN+R+C  CH+  K +S + + EI + D +  HHFK G CS
Sbjct: 663 ALSFALL-STNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFHHFKRGTCS 721

Query: 864 CGDYW 868
           C D W
Sbjct: 722 CQDRW 726



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 155/555 (27%), Positives = 258/555 (46%), Gaps = 54/555 (9%)

Query: 53  AKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAR 111
            K  + T   +L+ C ++ S+   + LHA  L    EID F+   L+ +Y+KCG + DA 
Sbjct: 47  TKFSKFTLSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDAL 106

Query: 112 EVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG 171
           +VF  +R  ++  WSAMI    +    +E  ELF LM + G  P+ F    ++    N G
Sbjct: 107 KVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMG 166

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
           D   G+ +H  + K G      V N ++ +Y+K   +    + FE+M   D V+WN+++S
Sbjct: 167 DLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLS 226

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL-------------------- 271
           G++         R+F +M  E  K  + TF  ++RS + L                    
Sbjct: 227 GFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDD 286

Query: 272 ----GQCDVAMEMVKR-MESLGIT------PDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
               G   V M    R +E  G+        D+F+WT +ISG+AQ  +  +A+  F++M 
Sbjct: 287 DDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQ 346

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
             G+ PN  T+ S +S C+ +  L  G ++H++AVK G   D+ VG++L+++Y KC  +E
Sbjct: 347 REGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCME 406

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
            AE +F  +  +D+ SWN++I+GY Q G   KA E F  M    + P+  T+  ++S   
Sbjct: 407 HAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACS 466

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
             G  +E    F  M K   +  +   +  ++    + G+ N       +M      P  
Sbjct: 467 FMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMN---LTPYS 523

Query: 501 VTILSVLPACAYLVASNKVKEIHGCV-----LRRSLESSLPVMNS----LIDTYAKSGNI 551
           +   +VL AC          ++HG V       + L    P+M+S    L + +A  G  
Sbjct: 524 LIWETVLGAC----------KLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRW 573

Query: 552 VYSRTIFDGMSSKDI 566
              R I   M+S+ I
Sbjct: 574 DDVRNIRALMTSRGI 588



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/534 (25%), Positives = 238/534 (44%), Gaps = 63/534 (11%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A  +F  M E+N  +W+A++  Y++    ++V++LF  M +       F    +L+ C N
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
            G    GK++H+L ++ G      +  S++ +Y KCG +  A + F  +   D VAW++M
Sbjct: 64  TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD-------------- 275
           I+G  Q G   EA  LF  M R+  +    T + L+ +   +G                 
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183

Query: 276 ----------VAMEMVKRMESLG-------ITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
                     + M M  R    G         PD+ +W  ++SGF  +    +   +F +
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   G  PN  T  S + +C+ L     G ++H+  +K    DD  VG +L++MY+K   
Sbjct: 244 MLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC 303

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           LE A   FD + ++D++SW  +I+GY Q     KA + F +MQ   + PN  T    +SG
Sbjct: 304 LEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSG 363

Query: 439 -----YIQNGNEDEA-----------------VDLFQRMGKNDK--------VKRNTASW 468
                 ++NG +  A                 VDL+ + G  +         + R+  SW
Sbjct: 364 CSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSW 423

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           N++I+GY Q GQ   AL  FR M S    P+  T + VL AC+++    + K+    + +
Sbjct: 424 NTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSK 483

Query: 529 -RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
              +  S+     ++D   ++G     +   + M+ +   + W +++    LHG
Sbjct: 484 IYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHG 537



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 152/293 (51%), Gaps = 11/293 (3%)

Query: 51  QGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDD 109
           +G K    T+I++L++C         +++HA  +   ++ D FV T L+ +YAK  CL+D
Sbjct: 247 EGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLED 306

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A   F+ +  R++++W+ +I  Y++  +  + V+ F  M ++G+ P+++     L  C +
Sbjct: 307 AGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSH 366

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
               E G+ +H++ +K G      V ++++ +Y KCG +  A   F+ +  +D V+WN++
Sbjct: 367 MATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTI 426

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-- 287
           ISGY Q G+ ++A   F  M  E I     TF  ++ + + +G   +  E  KR +S+  
Sbjct: 427 ISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMG---LVEEGKKRFDSMSK 483

Query: 288 --GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
             GI P +  + CM+    + G+ ++     +EM+     P  +   + + AC
Sbjct: 484 IYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLT---PYSLIWETVLGAC 533



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 169/391 (43%), Gaps = 67/391 (17%)

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           +E AER+F  + +K+  SWN+++ GY Q G   K  +LF KM+E +   +  T + ++ G
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 439 YIQNGNEDEA----------------------VDLFQRMGK-NDKVK-----RN--TASW 468
               G+  E                       VD++ + G   D +K     RN    +W
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           +++I G  Q G    A  +F  M+     PN  T+ S++     +      + IHGC+ +
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICK 180

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
              ES   V N LI  Y KS  +     +F+ M++ D+++WN+L+ G+           +
Sbjct: 181 YGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRI 240

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F QM   G KPN  TF+S++ + S     + GK+V   I +           +A++D+Y 
Sbjct: 241 FYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVG-TALVDMYA 299

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           ++  LE+A                                 +A +RL +    D+    +
Sbjct: 300 KARCLEDAG--------------------------------VAFDRLVNR---DIFSWTV 324

Query: 709 ILQIYAICGKPEDALK-VRKLERENTRRNSF 738
           I+  YA   + E A+K  R+++RE  + N +
Sbjct: 325 IISGYAQTDQAEKAVKYFRQMQREGIKPNEY 355



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 1/139 (0%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLL 98
           +A+     +  +G K    T  + L  C    ++   R+LHA         D+FV + L+
Sbjct: 337 KAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALV 396

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +Y KCGC++ A  +F+ +  R++ +W+ +I  YS+  +  + +E F +M+ +G+ PD+ 
Sbjct: 397 DLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEA 456

Query: 159 LFPKILQACGNCGDFEAGK 177
            F  +L AC   G  E GK
Sbjct: 457 TFIGVLSACSFMGLVEEGK 475


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 256/820 (31%), Positives = 400/820 (48%), Gaps = 127/820 (15%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF-FLMVQDGL 153
           TKL   +   G +   R++F  + + +L+ ++ +I  +S +   +  + L+  L  +  L
Sbjct: 50  TKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNL 109

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD+F +   + A     D   G L+H+              +S++              
Sbjct: 110 RPDNFTYAFAISAASRLEDERVGVLLHA--------------HSIV-------------- 141

Query: 214 FFESMDEKDGVAWN-----SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
                   DGVA N     +++  YF+    + A ++FD M                   
Sbjct: 142 --------DGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPER---------------- 177

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
                                  D   W  MISGF++N     ++ +F +M  VG+  + 
Sbjct: 178 -----------------------DTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDS 214

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            T+ + ++A  +L+   +GM I  LA K G   DV V   LI++YSKC +      +FD 
Sbjct: 215 TTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQ 274

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY--------- 439
           I   D+ S+N+MI+GY        A  LF ++  S    N  T   LI  Y         
Sbjct: 275 IDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLS 334

Query: 440 --IQNGNEDEAVDL-------------------FQRMGKNDKVKRNTASWNSLIAGYQQL 478
             IQN +    + L                   F R   ++  +++ ASWN++I+GY Q 
Sbjct: 335 RLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQN 394

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           G  + A+ +F++M      PN VT+ S+L ACA L A +  K +HG +    LES++ V 
Sbjct: 395 GLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVS 453

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
            +L+D YAK G+IV +R +FD M  K+++TWN++I GY LHG    AL LF +M   G+ 
Sbjct: 454 TALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIP 513

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           P   TFLSI+ A S +G+V  G ++F S+   Y   PM EHY+ M+D+ GR+G+L  A+E
Sbjct: 514 PTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALE 573

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
           FIE MP+EP  ++W ALL AC IH N ++A +A +RLF L+P +V    L+  IY+    
Sbjct: 574 FIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRN 633

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA 778
              A  VR++ ++     + G   IE+ +  Y F +G  S   +  ++  L    E +T 
Sbjct: 634 FPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEML----EKLTG 689

Query: 779 RSSHSGLC----------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMC 828
           +   +G            +E+EEKE +  +HSEKLA+AF LI S++    IRI+KN+R+C
Sbjct: 690 KMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLI-STKPGTEIRIIKNLRVC 748

Query: 829 VHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           + CH   K++S +    I + D+   HHFKNG CSCGDYW
Sbjct: 749 LDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 210/433 (48%), Gaps = 32/433 (7%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           ++FV + ++ +Y K    + AR+VF+ M ER+   W+ MI  +SR+  + + + +F  M+
Sbjct: 147 NLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDML 206

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             GL  D      +L A     ++  G  +  L  K G+     V   ++++Y KCGK  
Sbjct: 207 DVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSC 266

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
             R  F+ +D+ D +++N+MISGY    E + A  LF ++     ++   T   LI  Y 
Sbjct: 267 KGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYL 326

Query: 270 QLGQCDVAMEMVKRMESLGI--TPDVFT-----------------------------WTC 298
                 ++  +      +GI   P V T                             W  
Sbjct: 327 PFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNA 386

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           MISG+ QNG T +A+ LF+EM    + PN VT+TS +SAC  L AL++G  +H L     
Sbjct: 387 MISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSER 445

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              +V V  +L++MY+KC  +  A ++FD++ DK+V +WN+MI GY   G+  +A +LF 
Sbjct: 446 LESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFY 505

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
           +M +S +PP  +T+  ++     +G   E  ++F  M  N   +  +  +  ++    + 
Sbjct: 506 EMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRA 565

Query: 479 GQKNNALGVFRKM 491
           GQ  NAL    +M
Sbjct: 566 GQLTNALEFIERM 578



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 13/265 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NG  + AI++   +  Q +     T  ++L AC    ++ + + +H  + +   E +V+V
Sbjct: 394 NGLTDRAISLFQEMMPQLSP-NPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYV 452

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +YAKCG + +AR++F+ M ++N+ TW+AMI  Y      +E ++LF+ M+Q G+
Sbjct: 453 STALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGI 512

Query: 154 FPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            P    F  IL AC + G   E  ++ HS+    G   +      ++ +  + G+L  A 
Sbjct: 513 PPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNAL 572

Query: 213 RFFESMDEKDGVA-WNSMISGYFQIGENDE-----AHRLFDKMCREEIKLGVVTFNILIR 266
            F E M  + G A W +++ G   I +N E     + RLF ++  E +   V+  NI   
Sbjct: 573 EFIERMPLEPGPAVWGALL-GACMIHKNTEMANVASKRLF-QLDPENVGYYVLLSNIYST 630

Query: 267 SYNQLGQCDVAMEMVKRMESLGITP 291
             N      V   + KR   L  TP
Sbjct: 631 DRNFPKAASVRQVVKKR--KLAKTP 653


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 271/929 (29%), Positives = 453/929 (48%), Gaps = 116/929 (12%)

Query: 39   NEAITVLDSIATQGAKVRRNTYINLLQACIDSN--SIHLARKLHAFLNLVTEI-DVFVKT 95
            NEA  +   + + G       + ++++AC +     +    ++H  ++    + DV    
Sbjct: 156  NEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASN 215

Query: 96   KLLSVYAKC-GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ---- 150
             L+S+Y    G +D AR  F+ +  RNL + ++MI  Y +        ++F  M +    
Sbjct: 216  VLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMG 275

Query: 151  DGLFPDDFLFPKILQAC---GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
            DGL P+++ F  ++ A     N G     +L+ + V K G      V +++++ + K G 
Sbjct: 276  DGLKPNEYTFGSLISATCSLANSGLVLLEQLL-TRVEKSGFLHDLYVGSALVSGFAKAGS 334

Query: 208  LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI---- 263
            + +A+  F+ M  ++ V+ N +I G  +    +EA  LF +M ++ ++L   ++ I    
Sbjct: 335  IGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEM-KDSVELNPNSYMIILTA 393

Query: 264  --------------------LIRS----------------YNQLGQCDVAMEMVKRMESL 287
                                LIRS                Y + G  + A  + + M++ 
Sbjct: 394  FPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDN- 452

Query: 288  GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
                D  TW  MI+G  QN +  +A+  F+EM    + P+  T+ SA+S+C  L  +++G
Sbjct: 453  ---KDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVG 509

Query: 348  MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
             ++H   +K+G   DV V N+L+ +Y +C  ++  ++ F ++ D D  SWNS+I     +
Sbjct: 510  EQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADS 569

Query: 408  GYCG-KAYELFIKMQESDVPPNVITW---------------------------------- 432
                 +A E F+ M  +   PN +T+                                  
Sbjct: 570  EPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAI 629

Query: 433  -NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
             N L++ Y + G+     ++F RM      +++  SWNS+I+GY        A+ +   M
Sbjct: 630  ENALLACYGKCGDMGYCENIFSRMSD----RQDEVSWNSMISGYIHNELLPKAMDMVWFM 685

Query: 492  QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
                   +  T  +VL ACA +    +  E+HGC +R  LES + + ++L+D YAK G I
Sbjct: 686  MQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRI 745

Query: 552  VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             Y+   F+ M ++++ +WNS+I GY  HG    +LDLF QMK  G  P+  TF+ ++ A 
Sbjct: 746  DYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSAC 805

Query: 612  SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
            S AG+V+ G   F S++E Y + P +EH+S M+DL GR G+L +  +F+  MP++P+  I
Sbjct: 806  SHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLI 865

Query: 672  WEALLTA-CRIHG-NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLE 729
            W  +L A CR +G N  L   A E L ++EP + +   L+  +YA  GK +D  K R   
Sbjct: 866  WRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAM 925

Query: 730  RENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPENVTAR 779
            R+   +   G  W+ +K+ V+ FV G  S    DL+Y  L+           +PE   A 
Sbjct: 926  RKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIPETRFAL 985

Query: 780  SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVS 839
                   +E E KEE+   HSEK+A+AF L   S+ P  IRI+KN+R+C  CH   KY+S
Sbjct: 986  YD-----LEGESKEELLSYHSEKIAVAFVLTRPSKMP--IRILKNLRVCGDCHSAFKYIS 1038

Query: 840  MMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             +   +I L DS   HHF+NG+CSCGD+W
Sbjct: 1039 QIVERQIVLRDSNRFHHFENGKCSCGDFW 1067



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 194/698 (27%), Positives = 334/698 (47%), Gaps = 95/698 (13%)

Query: 69  DSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAM 128
           D+  +HL    + F+N     D+F+   L+++YA+ G L   R+VF++M  RNL +WS +
Sbjct: 91  DAEELHLQLFKNGFVN-----DLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCL 145

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF--EAGKLMHSLVIKL 186
           I  Y+R++   E  ELF  MV DG  P+ + F  +++AC  CG++  + G  +H L+ K 
Sbjct: 146 ISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKT 205

Query: 187 GMSCVRRVRNSVLAVYVKC-GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRL 245
                    N ++++Y    G + +ARR F+S+  ++ V+ NSMIS Y Q G+   A  +
Sbjct: 206 QYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDI 265

Query: 246 FDKMCREEIKLGV----VTFNILIRSYNQLGQCDVAM--EMVKRMESLGITPDVFTWTCM 299
           F  M +E +  G+     TF  LI +   L    + +  +++ R+E  G   D++  + +
Sbjct: 266 FSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSAL 325

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMP-NGVTI--------TSAISACTDLK-------- 342
           +SGFA+ G    A ++F++MS+  V+  NG+ I          A+    ++K        
Sbjct: 326 VSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPN 385

Query: 343 -----------------ALAMGMEIHSLAVKMGFTD-DVLVGNSLINMYSKCEELEAAER 384
                                G E+H+  ++ G  +  + +GN LINMY+KC  +  A  
Sbjct: 386 SYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACV 445

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT------------W 432
           VF ++ +KD  +WNSMI G  Q     +A + F +M+ +++ P+  T            W
Sbjct: 446 VFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGW 505

Query: 433 -----------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
                                  N L++ Y + G   E    F  M   D V     SWN
Sbjct: 506 ISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHV-----SWN 560

Query: 470 SLIAGYQQLGQKN-NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           SLI            A+  F  M  + + PN VT +++L A + L      K+IH  VL+
Sbjct: 561 SLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLK 620

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLHGFWHAALD 587
           R++ +   + N+L+  Y K G++ Y   IF  MS + D ++WNS+I GY+ +     A+D
Sbjct: 621 RNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMD 680

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF-CSITECYQIIPMIEHYSAMIDL 646
           +   M   G + +  TF +++ A +    ++ G +V  CS+  C +   +I   SA++D+
Sbjct: 681 MVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIG--SALVDM 738

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
           Y + G+++ A  F E MP     S W ++++    HG+
Sbjct: 739 YAKCGRIDYASRFFEMMPARNLYS-WNSMISGYARHGH 775



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 128/308 (41%), Gaps = 16/308 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           N  L +A+ ++  +  +G ++   T+  +L AC    ++    ++H   +    E D+ +
Sbjct: 672 NELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVI 731

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAKCG +D A   FE M  RNLY+W++MI  Y+R     + ++LF  M   G 
Sbjct: 732 GSALVDMYAKCGRIDYASRFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGP 791

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  +L AC + G    G     S+    G++      + ++ +  + G+L    
Sbjct: 792 LPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKME 851

Query: 213 RFFESMDEKDGV-AWNSMISGYFQI-GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
            F   M  K  V  W +++    +  G N    R   +M  E      V + +L   Y  
Sbjct: 852 DFLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYAS 911

Query: 271 LGQC-DVAMEMVKRMESLGITPDVFTWTCMISG---FAQNGRTSQALDLFKE-------- 318
            G+  DVA   V   ++        +W  M  G   F    ++    DL  E        
Sbjct: 912 GGKWDDVAKTRVAMRKAFVKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGK 971

Query: 319 MSFVGVMP 326
           M   G +P
Sbjct: 972 MRLAGYIP 979



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 3/141 (2%)

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
           Y   S   +E+H  + +    + L + N+LI+ YA+ G++   R +FD M  +++++W+ 
Sbjct: 85  YSCGSKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSC 144

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL--GKKVFCSITE 629
           LI GY  +   + A +LF +M S G  PN   F S+I A    G   L  G ++   +++
Sbjct: 145 LISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSK 204

Query: 630 CYQIIPMIEHYSAMIDLYGRS 650
             Q +  +   + +I +YG +
Sbjct: 205 T-QYVNDVTASNVLISMYGNA 224


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 243/738 (32%), Positives = 377/738 (51%), Gaps = 54/738 (7%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           +D  R +F  +   N + W+ MI AY +         L+  M+ + L  D++ +P ++QA
Sbjct: 28  IDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQA 87

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C         K +H+ V+KLG      VRN+++  +  C  +  A R F      D V+W
Sbjct: 88  CSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSW 147

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
           NS+++GY +IG  +EA  ++ +M    I    +  N +I  +   G    A ++   M  
Sbjct: 148 NSILAGYIEIGNVEEAKHIYHQMPERSI----IASNSMIVLFGMRGLVVEACKLFDEM-- 201

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
             +  D+ TW+ +I+ F QN    +A+  F  M  +GVM + V   SA+SAC +L  + M
Sbjct: 202 --LEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNM 259

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G  IHSL++K+G    + + N+LI MYSKC ++  A ++FD     D+ SWNSMI+GY +
Sbjct: 260 GKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLK 319

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                 A  +F  M E D    V++W+ +ISGY QN   DE + LFQ             
Sbjct: 320 CNLVDNAKAIFDSMPEKD----VVSWSSMISGYAQNDLFDETLALFQ------------- 362

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
                                  +MQ S F P+  T++SV+ ACA L A  + K +H  +
Sbjct: 363 -----------------------EMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYI 399

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
            R  L  ++ +  +LID Y K G +  +  +F GM  K I TWN+LI G  ++G   ++L
Sbjct: 400 KRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSL 459

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
           D+F  MK   + PN  TF+ ++ A    G+VD G+  F S+   ++I P ++HY  M+DL
Sbjct: 460 DMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDL 519

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GR+GKL+EA E +  MP+ PD + W ALL AC+ HG+ ++      +L +L+P      
Sbjct: 520 LGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFH 579

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
            L+  IYA  GK +D L++R +  ++      G   IE   +++ F+ G  +    D + 
Sbjct: 580 VLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIE 639

Query: 767 SWLQNVP-----ENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRI 821
             L  +      E  T   +   L ++EEEKE     HSEKLA+AF LI  S  P  IRI
Sbjct: 640 DMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINIS-PPTPIRI 698

Query: 822 VKNIRMCVHCHETAKYVS 839
           +KN+R+C  CH  AK +S
Sbjct: 699 MKNLRICNDCHTAAKLIS 716



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 227/473 (47%), Gaps = 56/473 (11%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKL 97
            NE+ +VLDS+          ++ ++L   I+  ++  A+ ++   + + E  +     +
Sbjct: 136 FNES-SVLDSV----------SWNSILAGYIEIGNVEEAKHIY---HQMPERSIIASNSM 181

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           + ++   G + +A ++F++M E+++ TWSA+I  + +++ + E +  F  M + G+  D+
Sbjct: 182 IVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDE 241

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
            +    L AC N      GKL+HSL +K+G      ++N+++ +Y KCG ++ AR+ F+ 
Sbjct: 242 VVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDE 301

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
               D ++WNSMISGY +    D A  +FD M  ++    VV+++ +I  Y Q    D  
Sbjct: 302 AYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKD----VVSWSSMISGYAQNDLFDET 357

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
           + + + M+  G  PD                                     T+ S ISA
Sbjct: 358 LALFQEMQMSGFKPD-----------------------------------ETTLVSVISA 382

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C  L AL  G  +H+   + G T +V++G +LI+MY KC  +E A  VF  + +K + +W
Sbjct: 383 CARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTW 442

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
           N++I G    G    + ++F  M++  V PN IT+  ++      G  DE    F  M  
Sbjct: 443 NALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIH 502

Query: 458 NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           + K++ N   +  ++    + G+   A  +  +M  +   P+  T  ++L AC
Sbjct: 503 DHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMT---PDVATWGALLGAC 552



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 206/442 (46%), Gaps = 42/442 (9%)

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
           + ++  +R+ +     + F W  MI  + Q      A  L+K M    +  +  T    I
Sbjct: 26  IHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLI 85

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
            AC+  ++     ++H+  +K+GF  DV V N+LIN +S C  +  A RVF+     D  
Sbjct: 86  QACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSV 145

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           SWNS++AGY + G   +A  ++ +M E     ++I  N +I  +   G   EA  LF  M
Sbjct: 146 SWNSILAGYIEIGNVEEAKHIYHQMPER----SIIASNSMIVLFGMRGLVVEACKLFDEM 201

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
            + D V     +W++LIA +QQ      A+  F  M       + V  +S L ACA L+ 
Sbjct: 202 LEKDMV-----TWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLV 256

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR-------------------- 555
            N  K IH   L+   ES + + N+LI  Y+K G+I+ +R                    
Sbjct: 257 VNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISG 316

Query: 556 -----------TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
                       IFD M  KD+++W+S+I GY  +  +   L LF +M+  G KP+  T 
Sbjct: 317 YLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTL 376

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           +S+I A +    ++ GK V   I      I +I   + +ID+Y + G +E A+E    M 
Sbjct: 377 VSVISACARLAALEQGKWVHAYIKRNGLTINVILG-TTLIDMYMKCGCVETALEVFYGM- 434

Query: 665 IEPDSSIWEALLTACRIHGNID 686
           IE   S W AL+    ++G ++
Sbjct: 435 IEKGISTWNALILGLAMNGLVE 456



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 123/251 (49%), Gaps = 8/251 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVF 92
           N   +E + +   +   G K    T ++++ AC    ++   + +HA++  N +T I+V 
Sbjct: 351 NDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLT-INVI 409

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           + T L+ +Y KCGC++ A EVF  M E+ + TW+A+I   + +      +++F  M +  
Sbjct: 410 LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH 469

Query: 153 LFPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           + P++  F  +L AC + G  + G+   +S++    +    +    ++ +  + GKL  A
Sbjct: 470 VTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEA 529

Query: 212 RRFFESMDEKDGVA-WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-YN 269
                 M     VA W +++    + G+++   R+  K+   E++     F++L+ + Y 
Sbjct: 530 EELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLI--ELQPDHDGFHVLLSNIYA 587

Query: 270 QLGQCDVAMEM 280
             G+ D  +E+
Sbjct: 588 SKGKWDDVLEI 598


>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 244/782 (31%), Positives = 398/782 (50%), Gaps = 93/782 (11%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA--RKLHAFLNLVTEI--DVFVKT 95
           +A+ +LDS+        ++T +N    C++S +  L+  R+ HA + L T +  D  + T
Sbjct: 6   QALALLDSV--------QHTILN----CLNSTTASLSQTRQAHAHI-LKTGLFNDTHLAT 52

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
           KLLS YA   C  DA  V + + E N++++S +I A+S+  ++   +  F  M+  GL P
Sbjct: 53  KLLSHYANNMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMP 112

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D+ + P  ++AC      +  + +H +    G      V++S++ +Y+KC ++       
Sbjct: 113 DNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQI------- 165

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
                                    +AHR+FD+M   +    VV+++ L+ +Y + G  D
Sbjct: 166 ------------------------RDAHRVFDRMFEPD----VVSWSALVAAYARQGCVD 197

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            A  +   M   G+ P++ +W  MI+GF  +G  S+A+ +F +M   G  P+G TI+S +
Sbjct: 198 EAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVL 257

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
            A  DL+ L MG+ IH   +K G   D  V ++LI+MY KC       +VFD +   DV 
Sbjct: 258 PAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDV- 316

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
                       G C                      N  I G  +NG  + ++ LF+++
Sbjct: 317 ------------GSC----------------------NAFIFGLSRNGQVESSLRLFRQL 342

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
            K+  ++ N  SW S+IA   Q G+   AL +FR+MQ +   PN VTI  +LPAC  + A
Sbjct: 343 -KDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAA 401

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
               K  H   LRR + + + V ++LID YAK G I  SR  FDG+ +K+++ WN++I G
Sbjct: 402 LMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAG 461

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
           Y +HG    A+++FD M+  G KP+  +F  ++ A S +G+ + G   F S++  Y I  
Sbjct: 462 YAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEA 521

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
            +EHY+ M+ L  R+GKLE+A   I  MP+ PD+ +W ALL++CR+H N+ L  +A E+L
Sbjct: 522 RVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKL 581

Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
           F+LEP +     L+  IYA  G   +  +VR + +    R + G  WIEVKN V+  + G
Sbjct: 582 FELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAG 641

Query: 756 GWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALI 810
             S      +   L  +   +        +      +EE++KE+I   HSEKLA+ F L+
Sbjct: 642 DKSHPQMTQIIENLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAVVFGLL 701

Query: 811 GS 812
            +
Sbjct: 702 NT 703



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 225/491 (45%), Gaps = 71/491 (14%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKT 95
           + + A++    + T+G         + ++AC   +++  AR++H   ++   + D FV++
Sbjct: 94  QFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQS 153

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR----DQRWR------------ 139
            L+ +Y KC  + DA  VF+ M E ++ +WSA++ AY+R    D+  R            
Sbjct: 154 SLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQP 213

Query: 140 -------------------EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
                              E V +F  M   G  PD      +L A G+  D   G L+H
Sbjct: 214 NLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIH 273

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
             VIK G+   + V ++++ +Y KC       + F+ MD  D  + N+ I G  + G+ +
Sbjct: 274 GYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVE 333

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            + RLF ++  + ++L VV++  +I   +Q G+   A+E+ + M+  G+ P         
Sbjct: 334 SSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKP--------- 384

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
                                     N VTI   + AC ++ AL  G   H  +++ G +
Sbjct: 385 --------------------------NSVTIPCLLPACGNIAALMHGKAAHCFSLRRGIS 418

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            DV VG++LI+MY+KC  ++A+   FD I  K++  WN++IAGY   G   +A E+F  M
Sbjct: 419 TDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLM 478

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
           Q S   P++I++  ++S   Q+G  +E    F  M     ++     +  ++    + G+
Sbjct: 479 QRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGK 538

Query: 481 KNNALGVFRKM 491
              A  + R+M
Sbjct: 539 LEQAYAMIRRM 549



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 3/200 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NGR  EA+ +   +   G K    T   LL AC +  ++   +  H F L      DV+V
Sbjct: 364 NGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYV 423

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAKCG +  +R  F+ +  +NL  W+A+I  Y+   + +E +E+F LM + G 
Sbjct: 424 GSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQ 483

Query: 154 FPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  +L AC   G  E G    +S+  K G+         ++ +  + GKL  A 
Sbjct: 484 KPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAY 543

Query: 213 RFFESMD-EKDGVAWNSMIS 231
                M    D   W +++S
Sbjct: 544 AMIRRMPVNPDACVWGALLS 563


>gi|15240572|ref|NP_200385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g55740, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
 gi|9758608|dbj|BAB09241.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332009292|gb|AED96675.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 830

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 224/760 (29%), Positives = 403/760 (53%), Gaps = 38/760 (5%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-- 89
           LC NG + EA++++  +  +  ++    Y  +LQ C+    +   +++HA +    +   
Sbjct: 45  LCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYA 104

Query: 90  -DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            + +++TKL+  YAKC  L+ A  +F  +R RN+++W+A+IG   R       +  F  M
Sbjct: 105 RNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEM 164

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           +++ +FPD+F+ P + +ACG       G+ +H  V+K G+     V +S+  +Y KCG L
Sbjct: 165 LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVL 224

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             A + F+ + +++ VAWN+++ GY Q G+N+EA RLF  M ++ ++   VT +  + + 
Sbjct: 225 DDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSAS 284

Query: 269 NQLGQCDV-----AMEMVKRME---SLGIT-----------------------PDVFTWT 297
             +G  +      A+ +V  ME    LG +                        DV TW 
Sbjct: 285 ANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWN 344

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            +ISG+ Q G    A+ + + M    +  + VT+ + +SA    + L +G E+    ++ 
Sbjct: 345 LIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRH 404

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            F  D+++ +++++MY+KC  +  A++VFD   +KD+  WN+++A Y ++G  G+A  LF
Sbjct: 405 SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLF 464

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
             MQ   VPPNVITWN++I   ++NG  DEA D+F +M ++  +  N  SW +++ G  Q
Sbjct: 465 YGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTMMNGMVQ 523

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL-P 536
            G    A+   RKMQ S   PN  +I   L ACA+L + +  + IHG ++R    SSL  
Sbjct: 524 NGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVS 583

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           +  SL+D YAK G+I  +  +F      ++   N++I  Y L+G    A+ L+  ++  G
Sbjct: 584 IETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVG 643

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           LKP+  T  +++ A + AG ++   ++F  I     + P +EHY  M+DL   +G+ E+A
Sbjct: 644 LKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKA 703

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
           +  IE+MP +PD+ + ++L+ +C      +L      +L + EP +      I   YA+ 
Sbjct: 704 LRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVE 763

Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEV--KNLVYTFVT 754
           G  ++ +K+R++ +    +   G  WI++  +  V+ FV 
Sbjct: 764 GSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVA 803



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 199/425 (46%), Gaps = 42/425 (9%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
           +P   ++   +S   +NG   +AL L  EM F  +          +  C   + L+ G +
Sbjct: 32  SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQ 91

Query: 350 IHSLAVKMG--FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
           IH+  +K G  +  +  +   L+  Y+KC+ LE AE +F  ++ ++V+SW ++I   C+ 
Sbjct: 92  IHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRI 151

Query: 408 GYCGKAYELFIKMQESDV-PPNVITWNVL--------------ISGY-IQNGNED----- 446
           G C  A   F++M E+++ P N +  NV               + GY +++G ED     
Sbjct: 152 GLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVA 211

Query: 447 -EAVDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
               D++ + G  D           RN  +WN+L+ GY Q G+   A+ +F  M+     
Sbjct: 212 SSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE 271

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P  VT+ + L A A +    + K+ H   +   +E    +  SL++ Y K G I Y+  +
Sbjct: 272 PTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMV 331

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           FD M  KD++TWN +I GYV  G    A+ +   M+   LK +  T  +++ A +    +
Sbjct: 332 FDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENL 391

Query: 618 DLGKKVFCSITECYQIIPMIEH----YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
            LGK+V     +CY I    E      S ++D+Y + G + +A +   D  +E D  +W 
Sbjct: 392 KLGKEV-----QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF-DSTVEKDLILWN 445

Query: 674 ALLTA 678
            LL A
Sbjct: 446 TLLAA 450



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 3/198 (1%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--N 84
           T ++ +  NG   EAI  L  +   G +    +    L AC    S+H+ R +H ++  N
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRN 575

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
           L     V ++T L+ +YAKCG ++ A +VF       L   +AMI AY+     +E + L
Sbjct: 576 LQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIAL 635

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           +  +   GL PD+     +L AC + GD  +A ++   +V K  M         ++ +  
Sbjct: 636 YRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLA 695

Query: 204 KCGKLIWARRFFESMDEK 221
             G+   A R  E M  K
Sbjct: 696 SAGETEKALRLIEEMPFK 713


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 246/757 (32%), Positives = 373/757 (49%), Gaps = 116/757 (15%)

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           L PD F FP +++A    G   A +L H+  ++LG                    L+   
Sbjct: 65  LRPDSFTFPPLVRAA--PGPASAAQL-HACALRLG--------------------LLHPN 101

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
            F          A  S++  Y + G   EA+R+FD                         
Sbjct: 102 VF----------ASGSLVHAYLRFGRVAEAYRVFD------------------------- 126

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
                 EM +R        DV  W  M+SG  +N R + A+ L   M   GV  + VT++
Sbjct: 127 ------EMPER--------DVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLS 172

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           S +  C  L   A+ + +H  AVK G + ++ V N+LI++Y K   L  A  VF  +  +
Sbjct: 173 SVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALR 232

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE------- 445
           D+ +WNS+I+   Q G    A ELF  M ES V P+V+T   L S   Q G+E       
Sbjct: 233 DLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVH 292

Query: 446 ----------------DEAVDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQK 481
                           +  VD++ +M K D  +        R+  SWN+LI GY Q G  
Sbjct: 293 CYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLA 352

Query: 482 NNALGVFRKMQS-SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
           N A+ ++  M +     P   T +SVLPA +YL    +   +H   ++  L   + V   
Sbjct: 353 NEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTC 412

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           LID YAK G +V +  +F+ M  +    WN++I G  +HG    AL LF QM+   +KP+
Sbjct: 413 LIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPD 472

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
             TF+S++ A S AG+VD G+  F  +   Y I+P+ +HY+ M+D+ GR+G+L+EA EFI
Sbjct: 473 HVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFI 532

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
           + MPI+PDS++W ALL ACRIHGN+++  +A + LF+L+P +V    L+  +YA  GK +
Sbjct: 533 QSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWD 592

Query: 721 DALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS 780
               VR L R    + + G   +EVK  V  F +G  +E +    +  +Q    ++ A+ 
Sbjct: 593 GVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQ--HEEIQRGLHDLLAKM 650

Query: 781 SHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHC 831
             +G           +EE+EKE+I   HSE+LA+AF +I +      + I KN+R+C  C
Sbjct: 651 KSAGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGT-PLHIYKNLRVCGDC 709

Query: 832 HETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           H   KY+S +   EI + D+   HHFK+G CSCGD+W
Sbjct: 710 HSATKYISKITEREIIVRDANRFHHFKDGHCSCGDFW 746



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 224/491 (45%), Gaps = 49/491 (9%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNL-VTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           T+  L++A     S   A +LHA  L L +   +VF    L+  Y + G + +A  VF++
Sbjct: 71  TFPPLVRAAPGPAS---AAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDE 127

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M ER++  W+AM+    R+ R  + V L   MV +G+  D      +L  C   GD    
Sbjct: 128 MPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALA 187

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
            +MH   +K G+S    V N+++ VY K G L  A   F  M  +D V WNS+IS   Q 
Sbjct: 188 LVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQG 247

Query: 237 GENDEAHRLFDKM---------------------CREEIKL---------------GVVT 260
           G+   A  LF  M                     C +E+                  ++ 
Sbjct: 248 GKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIA 307

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM- 319
            N ++  Y ++ + D A ++   +       DV +W  +I+G+ QNG  ++A+ ++ +M 
Sbjct: 308 GNAMVDMYAKMSKIDAAQKVFDNLPDR----DVVSWNTLITGYMQNGLANEAIRIYNDMH 363

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
           +  G+ P   T  S + A + L  L  GM +H+L++K G   DV V   LI++Y+KC +L
Sbjct: 364 NHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKL 423

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
             A  +F+ +  +    WN++IAG    G+  KA  LF +MQ+ ++ P+ +T+  L++  
Sbjct: 424 VEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAAC 483

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
              G  D+    F  M     +      +  ++    + GQ + A   F  +QS    P+
Sbjct: 484 SHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEA---FEFIQSMPIKPD 540

Query: 500 CVTILSVLPAC 510
                ++L AC
Sbjct: 541 SAVWGALLGAC 551



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 197/423 (46%), Gaps = 13/423 (3%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVT 87
           L  LC N R  +A+T+L  +  +G      T  ++L  C+      LA  +H + +    
Sbjct: 140 LSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGL 199

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
             ++FV   L+ VY K G L +A  VF  M  R+L TW+++I A  +  +    VELF  
Sbjct: 200 SGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHG 259

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR-NSVLAVYVKCG 206
           M++ G+ PD      +  A   CGD    K +H  V + G      +  N+++ +Y K  
Sbjct: 260 MMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMS 319

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-IKLGVVTFNILI 265
           K+  A++ F+++ ++D V+WN++I+GY Q G  +EA R+++ M   E +K    TF  ++
Sbjct: 320 KIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVL 379

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
            +Y+ LG     M M       G+  DV+  TC+I  +A+ G+  +A+ LF+ M      
Sbjct: 380 PAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTG 439

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P    I          KAL++  ++    +K     D +   SL+   S    ++     
Sbjct: 440 PWNAIIAGLGVHGHGAKALSLFSQMQQEEIK----PDHVTFVSLLAACSHAGLVDQGRSF 495

Query: 386 FDMIKDKDVYSWNSMIAGY-CQAGYCGKAYEL---FIKMQESDVPPNVITWNVLISGYIQ 441
           FD++  + VY    +   Y C     G+A +L   F  +Q   + P+   W  L+     
Sbjct: 496 FDLM--QTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRI 553

Query: 442 NGN 444
           +GN
Sbjct: 554 HGN 556



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 141/311 (45%), Gaps = 19/311 (6%)

Query: 35  NGRLNEAITVLDSIAT-QGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVF 92
           NG  NEAI + + +   +G K  + T++++L A      +    ++HA  +     +DV+
Sbjct: 349 NGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVY 408

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V T L+ +YAKCG L +A  +FE M  R+   W+A+I          + + LF  M Q+ 
Sbjct: 409 VTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEE 468

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL-GMSCVRRVRNSVLAVYVKCGKLIWA 211
           + PD   F  +L AC + G  + G+    L+  + G+  + +    ++ +  + G+L  A
Sbjct: 469 IKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEA 528

Query: 212 RRFFESMDEK-DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
             F +SM  K D   W +++ G  +I  N E  ++  +   E     V  + ++   Y +
Sbjct: 529 FEFIQSMPIKPDSAVWGALL-GACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAK 587

Query: 271 LGQCDV--AMEMVKRMESLGITP-----------DVFTWTCMISGFAQNGRTSQAL-DLF 316
           +G+ D   A+  + R ++L  TP            VF          Q+    + L DL 
Sbjct: 588 IGKWDGVDAVRSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLL 647

Query: 317 KEMSFVGVMPN 327
            +M   G +P+
Sbjct: 648 AKMKSAGYVPD 658


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 256/820 (31%), Positives = 399/820 (48%), Gaps = 127/820 (15%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF-FLMVQDGL 153
           TKL   +   G +   R++F  + + +L+ ++ +I  +S +   +  + L+  L     L
Sbjct: 50  TKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNL 109

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD+F +   + A     D   G L+H+              +S++              
Sbjct: 110 RPDNFTYAFAISAASRLEDERVGVLLHA--------------HSIV-------------- 141

Query: 214 FFESMDEKDGVAWN-----SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
                   DGVA N     +++  YF+    + A ++FD M                   
Sbjct: 142 --------DGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPER---------------- 177

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
                                  D   W  MISGF++N     ++ +F +M  VG+  + 
Sbjct: 178 -----------------------DTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDS 214

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            T+ + ++A  +L+   +GM I  LA K G   DV V   LI++YSKC +      +FD 
Sbjct: 215 TTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQ 274

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY--------- 439
           I   D+ S+N+MI+GY        A  LF ++  S    N  T   LI  Y         
Sbjct: 275 IDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNHLQLS 334

Query: 440 --IQNGNEDEAVDL-------------------FQRMGKNDKVKRNTASWNSLIAGYQQL 478
             IQN +    + L                   F R   ++  +++ ASWN++I+GY Q 
Sbjct: 335 RLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISGYTQN 394

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           G  + A+ +F++M      PN VT+ S+L ACA L A +  K +HG +    LES++ V 
Sbjct: 395 GLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYVS 453

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
            +L+D YAK G+IV +R +FD M  K+++TWN++I GY LHG    AL LF +M   G+ 
Sbjct: 454 TALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGIP 513

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           P   TFLSI+ A S +G+V  G ++F S+   Y   PM EHY+ M+D+ GR+G+L  A+E
Sbjct: 514 PTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNALE 573

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
           FIE MP+EP  ++W ALL AC IH N ++A +A +RLF L+P +V    L+  IY+    
Sbjct: 574 FIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQLDPENVGYYVLLSNIYSTDRN 633

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA 778
              A  VR++ ++     + G   IE+ +  Y F +G  S   +  ++  L    E +T 
Sbjct: 634 FPKAASVRQVVKKRKLAKTPGCTLIEIDDQQYVFTSGDRSHPQATAIFEML----EKLTG 689

Query: 779 RSSHSGLC----------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMC 828
           +   +G            +E+EEKE +  +HSEKLA+AF LI S++    IRI+KN+R+C
Sbjct: 690 KMREAGYQAETVTTALHDVEDEEKELMVNVHSEKLAIAFGLI-STKPGTEIRIIKNLRVC 748

Query: 829 VHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           + CH   K++S +    I + D+   HHFKNG CSCGDYW
Sbjct: 749 LDCHTATKFISKITERVIVVRDANRFHHFKNGICSCGDYW 788



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 210/433 (48%), Gaps = 32/433 (7%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           ++FV + ++ +Y K    + AR+VF+ M ER+   W+ MI  +SR+  + + + +F  M+
Sbjct: 147 NLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDML 206

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             GL  D      +L A     ++  G  +  L  K G+     V   ++++Y KCGK  
Sbjct: 207 DVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSC 266

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
             R  F+ +D+ D +++N+MISGY    E + A  LF ++     ++   T   LI  Y 
Sbjct: 267 KGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYL 326

Query: 270 QLGQCDVAMEMVKRMESLGI--TPDVFT-----------------------------WTC 298
                 ++  +      +GI   P V T                             W  
Sbjct: 327 PFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNA 386

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           MISG+ QNG T +A+ LF+EM    + PN VT+TS +SAC  L AL++G  +H L     
Sbjct: 387 MISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSIGKWVHGLIKSER 445

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              +V V  +L++MY+KC  +  A ++FD++ DK+V +WN+MI GY   G+  +A +LF 
Sbjct: 446 LESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFY 505

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
           +M +S +PP  +T+  ++     +G   E  ++F  M  N   +  +  +  ++    + 
Sbjct: 506 EMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRA 565

Query: 479 GQKNNALGVFRKM 491
           GQ  NAL    +M
Sbjct: 566 GQLTNALEFIERM 578



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 13/265 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NG  + AI++   +  Q +     T  ++L AC    ++ + + +H  + +   E +V+V
Sbjct: 394 NGLTDRAISLFQEMMPQLSP-NPVTVTSILSACAQLGALSIGKWVHGLIKSERLESNVYV 452

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +YAKCG + +AR++F+ M ++N+ TW+AMI  Y      +E ++LF+ M+Q G+
Sbjct: 453 STALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGLHGHGKEALKLFYEMLQSGI 512

Query: 154 FPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            P    F  IL AC + G   E  ++ HS+    G   +      ++ +  + G+L  A 
Sbjct: 513 PPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSEHYACMVDILGRAGQLTNAL 572

Query: 213 RFFESMDEKDGVA-WNSMISGYFQIGENDE-----AHRLFDKMCREEIKLGVVTFNILIR 266
            F E M  + G A W +++ G   I +N E     + RLF ++  E +   V+  NI   
Sbjct: 573 EFIERMPLEPGPAVWGALL-GACMIHKNTEMANVASKRLF-QLDPENVGYYVLLSNIYST 630

Query: 267 SYNQLGQCDVAMEMVKRMESLGITP 291
             N      V   + KR   L  TP
Sbjct: 631 DRNFPKAASVRQVVKKR--KLAKTP 653


>gi|347954470|gb|AEP33735.1| chlororespiratory reduction 21, partial [Olimarabidopsis pumila]
          Length = 811

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 226/754 (29%), Positives = 395/754 (52%), Gaps = 44/754 (5%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-- 89
           LC NG + EA++++  +  +  ++    Y   LQ C+    +   +++HA +    +   
Sbjct: 25  LCKNGEIKEALSLVTEMDFRNXRIGPEIYGEXLQGCVYERDLSTGKQIHARILKNGDFYA 84

Query: 90  -DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            + +++TKL+  YAKC  L+ A  +F  +R RN+++W+A+IG   R       +  F  M
Sbjct: 85  RNEYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEM 144

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           +++ +FPD+F+ P + +ACG       G+ +H  VIK G+     V +S+  +Y KCG L
Sbjct: 145 LENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAGLEDCVFVASSLADMYGKCGVL 204

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------- 261
             AR+ F+ + E++ VAWN+++ GY Q G N+EA RLF  M +E ++   VT        
Sbjct: 205 DDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSAS 264

Query: 262 ------------------------NILIRS----YNQLGQCDVAMEMVKRMESLGITPDV 293
                                   NIL  S    Y ++G  + A  +  RM       DV
Sbjct: 265 ANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRM----FDKDV 320

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            TW  +ISG+ Q G    A+ + + M    +  + VT+++ +SA    + L  G E+   
Sbjct: 321 VTWNLLISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLSTLMSAAARTENLKFGKEVQCY 380

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            ++     D+++ ++ ++MY+KC  +  A++VFD   +KD+  WN+++A Y Q+G  G+A
Sbjct: 381 CIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAQSGLSGEA 440

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
             LF +MQ   VPPNVITWN++I   ++NG  +EA ++F +M ++  +  N  SW +++ 
Sbjct: 441 LRLFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKEMFLQM-QSSGISPNLISWTTMMN 499

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLE 532
           G  Q G    A+   RKMQ S   PN  +I   L A A L + +  + IHG ++R     
Sbjct: 500 GMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSASANLASLHFGRSIHGYIIRNLRHS 559

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
           SS+ +  SL+D YAK G+I  +  +F      ++  +N++I  Y L+G    A+ L+  +
Sbjct: 560 SSVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAIALYRSL 619

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
           +  G+KP+  TF S++ A + AG +D    VF ++   + + P +EHY  M+DL   +G+
Sbjct: 620 EDMGIKPDSVTFTSLLSACNHAGDIDQAVGVFTAMVLKHGMTPCLEHYGLMVDLLASAGE 679

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQI 712
            E+A+  IE+MP +PD+ + ++L+ +C      +L       L + EP +      I   
Sbjct: 680 TEKAIRLIEEMPYKPDARMIQSLVASCNKQHKTELVEYLSRHLLESEPENSGNYVTISNA 739

Query: 713 YAICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
           YA+ G  ++ +K+R++ +    +   G  WI++K
Sbjct: 740 YAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQIK 773



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 213/465 (45%), Gaps = 41/465 (8%)

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
           K  +   + P   ++   +S   +NG   +AL L  EM F             +  C   
Sbjct: 4   KHHDDQALPPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNXRIGPEIYGEXLQGCVYE 63

Query: 342 KALAMGMEIHSLAVKMG--FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           + L+ G +IH+  +K G  +  +  +   L+  Y+KC+ LE AE +F  ++ ++V+SW +
Sbjct: 64  RDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAA 123

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDV-PPNVITWNVL--------------ISGY-IQNG 443
           +I   C+ G C  A   F++M E+++ P N +  NV               + GY I+ G
Sbjct: 124 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAG 183

Query: 444 NED------EAVDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFR 489
            ED         D++ + G  D  +        RN  +WN+L+ GY Q G    A+ +F 
Sbjct: 184 LEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFS 243

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
            M+     P  VT+ + L A A +V   + K+ H   +   LE    +  SL++ Y K G
Sbjct: 244 DMRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVG 303

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
            I Y+  +FD M  KD++TWN LI GYV  G    A+ +   M+   LK +  T  +++ 
Sbjct: 304 LIEYAEMVFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLSTLMS 363

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDS 669
           A +    +  GK+V C     + +   I   S  +D+Y + G + +A +   D  +E D 
Sbjct: 364 AAARTENLKFGKEVQCYCIR-HSLDTDIVLASTTMDMYAKCGSIVDAKKVF-DSTVEKDL 421

Query: 670 SIWEALLTACRIHGNIDLAVLAIERLFDLE----PGDVLIQRLIL 710
            +W  LL A    G   L+  A+   ++++    P +V+   LI+
Sbjct: 422 ILWNTLLAAYAQSG---LSGEALRLFYEMQLESVPPNVITWNLII 463



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 3/198 (1%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--N 84
           T ++ +  NG   EAI  L  +   G +    +    L A  +  S+H  R +H ++  N
Sbjct: 496 TMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSASANLASLHFGRSIHGYIIRN 555

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
           L     V ++T L+ +YAKCG ++ A  VF       L  ++AMI AY+     +E + L
Sbjct: 556 LRHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAIAL 615

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           +  +   G+ PD   F  +L AC + GD  +A  +  ++V+K GM+        ++ +  
Sbjct: 616 YRSLEDMGIKPDSVTFTSLLSACNHAGDIDQAVGVFTAMVLKHGMTPCLEHYGLMVDLLA 675

Query: 204 KCGKLIWARRFFESMDEK 221
             G+   A R  E M  K
Sbjct: 676 SAGETEKAIRLIEEMPYK 693


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 251/787 (31%), Positives = 390/787 (49%), Gaps = 82/787 (10%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D   +  +LQ      D  AGK +H  ++K G S     +N +L  YV  G L  A + F
Sbjct: 2   DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           + M   + V++ ++  G+ +  +   A RL  ++ RE  ++    F  L++    +   D
Sbjct: 62  DEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLAD 121

Query: 276 VAMEMVKRMESLGITPDVF-------------------------------TWTCMISGFA 304
             + +   +  LG   D F                               +WT M++ +A
Sbjct: 122 TCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYA 181

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           +N     +L LF +M  +G  PN  TI++A+ +C  L+A  +G  +H  A+K+ +  D+ 
Sbjct: 182 ENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLY 241

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
           VG +L+ +Y+K  E+  A++ F+ +   D+  W+ MI+ Y Q+    +A ELF +M++S 
Sbjct: 242 VGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSS 301

Query: 425 V------------------------------------PPNVITWNVLISGYIQNGNEDEA 448
           V                                      NV   N L+  Y + G  + +
Sbjct: 302 VVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENS 361

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
           V LF         ++N  +WN++I GY QLG    AL +F  M      P  VT  SVL 
Sbjct: 362 VKLF-----TGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLR 416

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT 568
           A A LVA    ++IH   ++        V NSLID YAK G I  +R  FD M  +D ++
Sbjct: 417 ASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVS 476

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT 628
           WN+LICGY +HG    AL+LFD M+    KPN+ TF+ ++ A S AG++D G+  F S+ 
Sbjct: 477 WNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSML 536

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
           + Y I P IEHY+ M+ L GRSG+ +EA++ I ++P +P   +W ALL AC IH N+DL 
Sbjct: 537 QDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLG 596

Query: 689 VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL 748
            +  +R+ ++EP D     L+  +YA   + ++   VRK  ++   +   G  W+E + +
Sbjct: 597 KVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGV 656

Query: 749 VYTFVTGGWSESYSDLLYS---WLQNVPENV--TARSSHSGLCIEEEEKEEISGIHSEKL 803
           V+ F  G  S     L+++   WL     +       S   L +E++EKE +  +HSE+L
Sbjct: 657 VHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHSERL 716

Query: 804 ALAFALIGSSQAPH--TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQ 861
           ALAF LI   Q P   +IRI+KN+R+CV CH   K VS +   EI + D    HHF+ G 
Sbjct: 717 ALAFGLI---QIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGV 773

Query: 862 CSCGDYW 868
           CSCGDYW
Sbjct: 774 CSCGDYW 780



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 241/496 (48%), Gaps = 42/496 (8%)

Query: 51  QGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDD 109
           +G +V +  +  LL+  +  +       +HA++  L  + D FV T L+  Y+ CG +D 
Sbjct: 98  EGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDA 157

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           AR+VF+ +  +++ +W+ M+  Y+ +    + + LF  M   G  P++F     L++C  
Sbjct: 158 ARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNG 217

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
              F+ GK +H   +K+       V  ++L +Y K G++  A++FFE M + D + W+ M
Sbjct: 218 LEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLM 277

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN-------------ILIRSYNQLGQC-- 274
           IS Y Q  ++ EA  LF +M +  +   VV  N             +L+   NQ+  C  
Sbjct: 278 ISRYAQSDKSKEALELFCRMRQSSV---VVPNNFTFASVLQACASLVLLNLGNQIHSCVL 334

Query: 275 -----------DVAMEMVKRMESLGITPDVFT---------WTCMISGFAQNGRTSQALD 314
                      +  M++  +   +  +  +FT         W  +I G+ Q G   +AL+
Sbjct: 335 KVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALN 394

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
           LF  M  + + P  VT +S + A   L AL  G +IHSL +K  +  D +V NSLI+MY+
Sbjct: 395 LFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYA 454

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           KC  ++ A   FD +  +D  SWN++I GY   G   +A  LF  MQ+S+  PN +T+  
Sbjct: 455 KCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVG 514

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           ++S     G  D+    F+ M ++  ++     +  ++    + GQ + A+ +  ++   
Sbjct: 515 VLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIP-- 572

Query: 495 CFYPNCVTILSVLPAC 510
            F P+ +   ++L AC
Sbjct: 573 -FQPSVMVWRALLGAC 587



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 143/526 (27%), Positives = 239/526 (45%), Gaps = 81/526 (15%)

Query: 58  NTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           ++Y N+LQ  I +   +  + LH   L     +D+F +  LL+ Y   G L+DA ++F++
Sbjct: 4   HSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDE 63

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M   N  ++  +   +SR  +++    L   + ++G   + F+F  +L+   +    +  
Sbjct: 64  MPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTC 123

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
             +H+ V KLG      V  +++  Y  CG +  AR+ F+ +  KD V+W  M++ Y + 
Sbjct: 124 LSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAEN 183

Query: 237 GENDEAHRLFDKM------------------CR--EEIKLGVVTFN-------------- 262
             ++++  LF +M                  C   E  K+G                   
Sbjct: 184 YCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVG 243

Query: 263 -ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
             L+  Y + G+   A +  + M       D+  W+ MIS +AQ+ ++ +AL+LF  M  
Sbjct: 244 IALLELYTKSGEIAEAQQFFEEMPK----DDLIPWSLMISRYAQSDKSKEALELFCRMRQ 299

Query: 322 VG-VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
              V+PN  T  S + AC  L  L +G +IHS  +K+G   +V V N+L+++Y+KC E+E
Sbjct: 300 SSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIE 359

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-------- 432
            + ++F    +K+  +WN++I GY Q G   KA  LF  M   D+ P  +T+        
Sbjct: 360 NSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASA 419

Query: 433 ---------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
                                      N LI  Y + G  D+A   F +M K D+V    
Sbjct: 420 SLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEV---- 475

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
            SWN+LI GY   G    AL +F  MQ S   PN +T + VL AC+
Sbjct: 476 -SWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACS 520



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 163/318 (51%), Gaps = 6/318 (1%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+ ++LQAC     ++L  ++H+  L +  + +VFV   L+ VYAKCG ++++ ++F   
Sbjct: 309 TFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGS 368

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            E+N   W+ +I  Y +     + + LF  M+   + P +  +  +L+A  +    E G+
Sbjct: 369 TEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGR 428

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +HSL IK   +    V NS++ +Y KCG++  AR  F+ MD++D V+WN++I GY   G
Sbjct: 429 QIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHG 488

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTW 296
              EA  LFD M +   K   +TF  ++ + +  G  D      K M +  GI P +  +
Sbjct: 489 LGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEPCIEHY 548

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           TCM+    ++G+  +A+ L  E+ F    P+ +   + + AC   K L +G       ++
Sbjct: 549 TCMVWLLGRSGQFDEAVKLIGEIPF---QPSVMVWRALLGACVIHKNLDLGKVCAQRVLE 605

Query: 357 MGFTDDVLVGNSLINMYS 374
           M   DD      L NMY+
Sbjct: 606 MEPQDDA-THVLLSNMYA 622


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 230/669 (34%), Positives = 364/669 (54%), Gaps = 64/669 (9%)

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITP---DVFTWTCMISGFAQNGRTSQALDLFK 317
           FN L+  Y +LG  D A  +  R  +   +P   DV TW  MIS   Q GR ++A+++  
Sbjct: 213 FNALLSMYARLGLVDDAQSLF-RTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLY 271

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK-MGFTDDVLVGNSLINMYSKC 376
           +M  +GV P+GVT  SA+ AC+ L+ LA+G E+H++ +K      +  V ++L++MY+  
Sbjct: 272 DMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGN 331

Query: 377 EELEAAERVFDMIKD--KDVYSWNSMIAGYCQAGYCGKAYELFIKMQ-ESDVPPNVITWN 433
           E++ +A RVFDM+ +  + +  WN+MI GY QAG   +A ELF +M+ E+   P+  T +
Sbjct: 332 EKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMS 391

Query: 434 VLIS---------------GYI----QNGN---EDEAVDLFQRMGKNDKVKR-------- 463
            ++                GY+      GN   ++  +D++ R+G+ D  +R        
Sbjct: 392 GVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPR 451

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQ-----------------SSCFYPNCVTILSV 506
           +  SWN+LI G    G    A  +  +MQ                   C  PN +T++++
Sbjct: 452 DVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCM-PNNITLMTL 510

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
           LP CA L A  + KEIHG  +R +LES + V ++L+D YAK G +  SR +FD +  +++
Sbjct: 511 LPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNV 570

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFG-LKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
           ITWN LI  Y +HG    A+ LFD+M + G   PN  TF++ + A S +G+VD G ++F 
Sbjct: 571 ITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFH 630

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM-PIEPDSSIWEALLTACRIHGN 684
            +   + + P  + ++ ++D+ GR+G+L+EA   I  M P E   S W +LL ACR+H N
Sbjct: 631 GMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLLGACRLHRN 690

Query: 685 IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIE 744
           ++L  +A ERLF+LEPG+     L+  IY+  G  + ++ VR   R        G  WIE
Sbjct: 691 VELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRVRMRRQGVAKEPGCSWIE 750

Query: 745 VKNLVYTFVTGGWSESYSDLLYS-----WLQNVPENVTARSSHSGLCIEEEEKEEISGIH 799
           +   ++ F+ G  S   S  +++     W +   E     +S     ++E+EK  +   H
Sbjct: 751 LDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSCVLHDVDEDEKAAMLRYH 810

Query: 800 SEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKN 859
           SEKLA+AF L+ +      IR+ KN+R+C  CHE AK++S M   +I L D +  HHF++
Sbjct: 811 SEKLAIAFGLLRAPPGA-AIRVAKNLRVCNDCHEAAKFMSKMVGRDIVLRDVRRFHHFRD 869

Query: 860 GQCSCGDYW 868
           G CSCGDYW
Sbjct: 870 GSCSCGDYW 878



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 141/517 (27%), Positives = 229/517 (44%), Gaps = 75/517 (14%)

Query: 46  DSIATQGAKVRRNTYINLLQAC---IDSNSIHLARKLHAFLNLVTEID----VFVKTKLL 98
           D +A     V   T +++L AC      +   L R+ HAF      +D     F    LL
Sbjct: 158 DMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALL 217

Query: 99  SVYAKCGCLDDAREVFEDMRER------NLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           S+YA+ G +DDA+ +F            ++ TW+ MI    +  R  E VE+ + MV  G
Sbjct: 218 SMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLG 277

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK-LGMSCVRRVRNSVLAVYVKCGKLIWA 211
           + PD   F   L AC        G+ MH++V+K   ++    V ++++ +Y    K+  A
Sbjct: 278 VRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASA 337

Query: 212 RRFFESMDEKD---GVAWNSMISGYFQIGENDEAHRLFDKM------------------- 249
           RR F+ + E     G+ WN+MI GY Q G ++EA  LF +M                   
Sbjct: 338 RRVFDMVPEPSRQLGM-WNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPA 396

Query: 250 -CREE------------IKLGVV----TFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
             R E            +K G+       N L+  Y +LG+ DVA    +R+ ++    D
Sbjct: 397 CARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVA----RRIFAMIDPRD 452

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGV----------------MPNGVTITSAIS 336
           V +W  +I+G    G  ++A  L  EM                     MPN +T+ + + 
Sbjct: 453 VVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLP 512

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
            C  L A A G EIH  AV+     D+ VG++L++MY+KC  L A+  VFD +  ++V +
Sbjct: 513 GCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRNVIT 572

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQE-SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           WN +I  Y   G   +A  LF +M    +  PN +T+   ++    +G  D  ++LF  M
Sbjct: 573 WNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELFHGM 632

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
            ++  VK        ++    + G+ + A  +   M+
Sbjct: 633 ERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSME 669



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 123/510 (24%), Positives = 222/510 (43%), Gaps = 73/510 (14%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +  L   GR  EA+ VL  + + G +    T+ + L AC     + L R++HA +  
Sbjct: 251 NTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLK 310

Query: 86  VTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRE--RNLYTWSAMIGAYSRDQRWREV 141
             ++  + FV + L+ +YA    +  AR VF+ + E  R L  W+AMI  Y++     E 
Sbjct: 311 DADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEA 370

Query: 142 VELFFLM-VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
           +ELF  M  + G  P +     +L AC     F   + MH  V+K GM+  R V+N+++ 
Sbjct: 371 LELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMD 430

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISG---------YFQI--------------- 236
           +Y + G++  ARR F  +D +D V+WN++I+G          FQ+               
Sbjct: 431 MYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSS 490

Query: 237 -GENDEAHR--------------------------LFDKMCREEIKLGVVTFNILIRSYN 269
             E  EAHR                          +     R  ++  +   + L+  Y 
Sbjct: 491 TTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYA 550

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNG 328
           + G    +  +  R+       +V TW  +I  +  +G   +A+ LF EM+  G   PN 
Sbjct: 551 KCGCLAASRAVFDRLPRR----NVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNE 606

Query: 329 VTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
           VT  +A++AC+    +  G+E+ H +    G      +   ++++  +   L+ A  +  
Sbjct: 607 VTFIAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIIT 666

Query: 388 MIK--DKDVYSWNSMIAGYCQAGY---CGK-AYELFIKMQESDVPPNVITWNVLISGYIQ 441
            ++  ++ V +W+S++ G C+       G+ A E   +++  +    V+  N+    Y  
Sbjct: 667 SMEPGEQQVSAWSSLL-GACRLHRNVELGEVAAERLFELEPGEASHYVLLCNI----YSA 721

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
            G  D++V +  RM +    K    SW  L
Sbjct: 722 AGMWDKSVAVRVRMRRQGVAKEPGCSWIEL 751



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 160/383 (41%), Gaps = 79/383 (20%)

Query: 365 VGNSLINMYSKC--------------EELEAA----------------ERVFDMIKD--- 391
           VGN+L+  Y++C               EL  A                ER  D ++D   
Sbjct: 102 VGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALCLFRQWERALDALRDMLA 161

Query: 392 ---KDVYSWN--------SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
               DV S+         S + G        +A+   +K    D       +N L+S Y 
Sbjct: 162 EGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYA 221

Query: 441 QNGNEDEAVDLFQRMGKN-DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
           + G  D+A  LF+           +  +WN++I+   Q G+   A+ V   M S    P+
Sbjct: 222 RLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPD 281

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRS-LESSLPVMNSLIDTYAKSGNIVYSRTIF 558
            VT  S LPAC+ L      +E+H  VL+ + L ++  V ++L+D YA +  +  +R +F
Sbjct: 282 GVTFASALPACSRLEMLALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVF 341

Query: 559 DGM--SSKDIITWNSLICGYVLHGFWHAALDLFDQMKS-FGLKPNRGTFLSIILAHSLAG 615
           D +   S+ +  WN++ICGY   G    AL+LF +M++  G  P+  T   ++ A     
Sbjct: 342 DMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPA----- 396

Query: 616 MVDLGKKVFCSITECYQIIPMIEHY-------------SAMIDLYGRSGKLEEAMEFIED 662
                    C+ +E +     +  Y             +A++D+Y R G+++ A      
Sbjct: 397 ---------CARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFA- 446

Query: 663 MPIEP-DSSIWEALLTACRIHGN 684
             I+P D   W  L+T C + G+
Sbjct: 447 -MIDPRDVVSWNTLITGCVVQGH 468



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 50/208 (24%)

Query: 522 IHGCVLRRSL--ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS--KDIITWNSLICGYV 577
           +H   LRR+L    S  V N+L+  YA+ G++  +  +F   ++  +D +++NSLI    
Sbjct: 85  LHAAALRRALLHRPSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSLISALC 144

Query: 578 LHGFWHAALDLFDQMKSFGLKP-NRGTFLSIIL----------------AHSLA---GMV 617
           L   W  ALD    M + G    +  T +S++L                AH+ A   G +
Sbjct: 145 LFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFL 204

Query: 618 DLGKK--VFCSITECYQIIPMIEH---------------------YSAMIDLYGRSGKLE 654
           D G++   F ++   Y  + +++                      ++ MI L  + G+  
Sbjct: 205 DEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCA 264

Query: 655 EAMEFIEDM---PIEPDSSIWEALLTAC 679
           EA+E + DM    + PD   + + L AC
Sbjct: 265 EAVEVLYDMVSLGVRPDGVTFASALPAC 292


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 243/780 (31%), Positives = 391/780 (50%), Gaps = 108/780 (13%)

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           +S +A+ G +D AR +F+D++ + + +W+A++  Y  ++R  E  +LF  M +       
Sbjct: 23  ISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKMPERNTIS-- 80

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
                                                 N +++ YVK G +  AR+ F+ 
Sbjct: 81  -------------------------------------WNGLVSGYVKNGMISEARKVFDK 103

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
           M E++ V+W SM+ GY Q G  DEA  LF +M  +     VV++ +++    + G+ D A
Sbjct: 104 MPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKN----VVSWTVMLGGLIEDGRVDEA 159

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
               +R+  +    DV   T MI G    GR S+A ++F EM                  
Sbjct: 160 ----RRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMP----------------- 198

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
                                   +V+   S+I+ Y+   +++ A ++F+++ DK+  +W
Sbjct: 199 ----------------------QRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEVTW 236

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
            +M+ GY ++G   +A ELF  M    V P V   N +I G+  NG   +A  +F +M +
Sbjct: 237 TAMLKGYTRSGRINEAAELFKAMP---VKP-VAACNGMIMGFGLNGEVGKARWVFDQMKE 292

Query: 458 NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASN 517
            D       +W++LI  Y++ G +  AL +F  MQ     PN  +I+S+L  C  L + +
Sbjct: 293 KD-----DGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLD 347

Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
             +++H  ++R   +  + V + LI  Y K G++V  + +FD  SSKDI+ WNS+I GY 
Sbjct: 348 HGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYA 407

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
            HGF   AL++F +M S G  P+  TF+ ++ A    G V  G ++F S+   YQ+    
Sbjct: 408 QHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKT 467

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
           EHY+ M+DL GR+GKL EAM  IE+MP+E D+ +W ALL+ACR H N+DLA +A ++L  
Sbjct: 468 EHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQ 527

Query: 698 LEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGW 757
           LEP       L+  +YA   + +D  ++RK  R      S G  WIEV N V+ F TGG 
Sbjct: 528 LEPSSAGPYILLSNLYASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMF-TGGG 586

Query: 758 SESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFA 808
           S S+ +  +  +    E + A    +G C         ++EE+K      HSEK+A+A+ 
Sbjct: 587 SASHPE--HEMIMKKLEKLGASLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYG 644

Query: 809 LIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           L+        IR++KN+R+C  CH   K ++ +   EI L D+   HHFK+G CSC D+W
Sbjct: 645 LL-KVPVGKPIRVMKNLRVCGDCHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 227/480 (47%), Gaps = 34/480 (7%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNT--YINLLQACIDSNSIHLARKLHAFLNLVTEIDVF 92
           N R  EA  + D +        RNT  +  L+   + +  I  ARK+    + + E +V 
Sbjct: 60  NKRPAEAQKLFDKMP------ERNTISWNGLVSGYVKNGMISEARKV---FDKMPERNVV 110

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF-FLMVQD 151
             T ++  Y + G +D+A  +F  M E+N+ +W+ M+G    D R  E   LF  + V+D
Sbjct: 111 SWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKD 170

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR-NSVLAVYVKCGKLIW 210
            +   + +        G C +   G+L  +  I   M     V   S+++ Y    K+  
Sbjct: 171 VVASTNMI-------GGLCSE---GRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDV 220

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           AR+ FE M +K+ V W +M+ GY + G  +EA  LF  M  +     V   N +I  +  
Sbjct: 221 ARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKP----VAACNGMIMGFGL 276

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G+   A  +  +M+      D  TW+ +I  + + G   +AL LF  M   GV PN  +
Sbjct: 277 NGEVGKARWVFDQMKE----KDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPS 332

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
           I S +S C  L +L  G ++HS  V+  F  D+ V + LI MY KC +L   +RVFD   
Sbjct: 333 IISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFS 392

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
            KD+  WNS+IAGY Q G+  KA E+F +M  S   P+ IT+  ++S     G   E ++
Sbjct: 393 SKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLE 452

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +F+ M    +V + T  +  ++    + G+ N A+ +   M       + +   ++L AC
Sbjct: 453 IFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEA---DAIVWGALLSAC 509



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 184/425 (43%), Gaps = 48/425 (11%)

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           C IS FA+ G+  +A ++F ++          T+TS  +            E   L  KM
Sbjct: 21  CQISYFARLGQIDRARNIFDDL-------QSKTVTSWNAIVAGYFHNKRPAEAQKLFDKM 73

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
               + +  N L++ Y K   +  A +VFD + +++V SW SM+ GY Q G   +A  LF
Sbjct: 74  P-ERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLF 132

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV---------------- 461
            +M E     NV++W V++ G I++G  DEA  LF  +   D V                
Sbjct: 133 WRMPEK----NVVSWTVMLGGLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLS 188

Query: 462 ----------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
                     +RN  +W S+I+GY      NN + V RK+       N VT  ++L    
Sbjct: 189 EAREIFDEMPQRNVVAWTSMISGYAM----NNKVDVARKLFEVMPDKNEVTWTAMLKGYT 244

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
                N+  E+   +  + + +     N +I  +  +G +  +R +FD M  KD  TW++
Sbjct: 245 RSGRINEAAELFKAMPVKPVAAC----NGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSA 300

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
           LI  Y   GF   AL LF  M+  G++PN  + +SI+        +D G++V   +   +
Sbjct: 301 LIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSH 360

Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
             +  I   S +I +Y + G L       +      D  +W +++     HG  + A+  
Sbjct: 361 FDLD-IYVSSVLITMYIKCGDLVTGKRVFDRFS-SKDIVMWNSIIAGYAQHGFGEKALEV 418

Query: 692 IERLF 696
              +F
Sbjct: 419 FHEMF 423



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 173/364 (47%), Gaps = 39/364 (10%)

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
           F+    +    I+ +++  +++ A  +FD ++ K V SWN+++AGY       +A +LF 
Sbjct: 12  FSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFD 71

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
           KM E     N I+WN L+SGY++NG   EA  +F +M      +RN  SW S++ GY Q 
Sbjct: 72  KMPER----NTISWNGLVSGYVKNGMISEARKVFDKM-----PERNVVSWTSMVRGYVQE 122

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           G  + A  +F +M       N V+   +L     L+   +V E       R L   +PV 
Sbjct: 123 GLIDEAELLFWRMPEK----NVVSWTVMLGG---LIEDGRVDEA------RRLFDMIPVK 169

Query: 539 N-----SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
           +     ++I      G +  +R IFD M  ++++ W S+I GY ++     A  LF+ M 
Sbjct: 170 DVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMP 229

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
                 N  T+ +++  ++ +G ++   ++F ++      +  +   + MI  +G +G++
Sbjct: 230 D----KNEVTWTAMLKGYTRSGRINEAAELFKAMP-----VKPVAACNGMIMGFGLNGEV 280

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIY 713
            +A  ++ D   E D   W AL+      G  +L  LA+  L   E G       I+ I 
Sbjct: 281 GKA-RWVFDQMKEKDDGTWSALIKIYERKG-FELEALALFSLMQRE-GVRPNFPSIISIL 337

Query: 714 AICG 717
           ++CG
Sbjct: 338 SVCG 341



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 160/350 (45%), Gaps = 46/350 (13%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFLNLVTEI 89
           LC  GRL+EA  + D +       +RN   + +++     +N + +ARKL   +    E+
Sbjct: 181 LCSEGRLSEAREIFDEMP------QRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKNEV 234

Query: 90  DVFVKTKLLSVYAKCGCLDDARE-------------------------------VFEDMR 118
                T +L  Y + G +++A E                               VF+ M+
Sbjct: 235 ---TWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMK 291

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           E++  TWSA+I  Y R     E + LF LM ++G+ P+      IL  CG+    + G+ 
Sbjct: 292 EKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQ 351

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +HS +++        V + ++ +Y+KCG L+  +R F+    KD V WNS+I+GY Q G 
Sbjct: 352 VHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGF 411

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWT 297
            ++A  +F +M         +TF  ++ +    G+    +E+ + M+S   +      + 
Sbjct: 412 GEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYA 471

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
           CM+    + G+ ++A++L + M    V  + +   + +SAC   K L + 
Sbjct: 472 CMVDLLGRAGKLNEAMNLIENMP---VEADAIVWGALLSACRTHKNLDLA 518



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/453 (21%), Positives = 189/453 (41%), Gaps = 65/453 (14%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           ++  +L   I+   +  AR+L    +++   DV   T ++      G L +ARE+F++M 
Sbjct: 142 SWTVMLGGLIEDGRVDEARRL---FDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEMP 198

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD--DFLFPKILQACGNCGDF-EA 175
           +RN+  W++MI  Y+ + +     +LF +M      PD  +  +  +L+     G   EA
Sbjct: 199 QRNVVAWTSMISGYAMNNKVDVARKLFEVM------PDKNEVTWTAMLKGYTRSGRINEA 252

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
            +L  ++ +K   +C     N ++  +   G++  AR  F+ M EKD   W+++I  Y +
Sbjct: 253 AELFKAMPVKPVAAC-----NGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYER 307

Query: 236 IGENDEAHRLFDKMCREEIK-----------------------------------LGVVT 260
            G   EA  LF  M RE ++                                   L +  
Sbjct: 308 KGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYV 367

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
            ++LI  Y + G       +  R  S     D+  W  +I+G+AQ+G   +AL++F EM 
Sbjct: 368 SSVLITMYIKCGDLVTGKRVFDRFSS----KDIVMWNSIIAGYAQHGFGEKALEVFHEMF 423

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
             G  P+ +T    +SAC     +  G+EI  S+  K            ++++  +  +L
Sbjct: 424 SSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKL 483

Query: 380 -EAAERVFDMIKDKDVYSWNSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
            EA   + +M  + D   W ++++    +        A +  ++++ S   P ++  N+ 
Sbjct: 484 NEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNL- 542

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
              Y       +  +L + M   +  K    SW
Sbjct: 543 ---YASQSRWKDVAELRKTMRARNVSKSPGCSW 572


>gi|297796453|ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311946|gb|EFH42370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 829

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 230/765 (30%), Positives = 400/765 (52%), Gaps = 49/765 (6%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV 91
           LC NG + EA++++  +  +  ++    Y  +LQ C+    +   +++HA   ++   D 
Sbjct: 45  LCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHA--RILKNGDF 102

Query: 92  FVK-----TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
           + K     TKL+  YAKC  LD A  +F  +R RN+++W+A+IG   R       +  F 
Sbjct: 103 YAKNEYIETKLVIFYAKCDALDIAEVLFTKLRVRNVFSWAAIIGVKCRIGLCEGALMGFV 162

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M+++ +FPD+F+ P + +ACG       G+ +H  V+K G+     V +S+  +Y KCG
Sbjct: 163 EMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYGKCG 222

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----- 261
            L  AR+ F+ + E++ VAWN+++ GY Q G N+EA RLF  M +E ++   VT      
Sbjct: 223 VLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLS 282

Query: 262 --------------------------NILIRS----YNQLGQCDVAMEMVKRMESLGITP 291
                                     NIL  S    Y ++G  + A  +  RM    I  
Sbjct: 283 ASANMGGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRM----IDK 338

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           DV TW  +ISG+ Q G    A+ + + M    +  + VT+ + +SA    + L +G E+ 
Sbjct: 339 DVVTWNLIISGYVQQGLVENAIYMCQLMRLEKLKYDCVTLATLMSAAARTQNLKLGKEVQ 398

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
              ++  F  D+++ +++++MY+KC  +  A++VFD   +KD+  WN+++A Y ++G  G
Sbjct: 399 CYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTAEKDLILWNTLLAAYAESGLSG 458

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
           +   LF  MQ   VPPNVITWN++I   ++NG  DEA D+F +M ++  +  N  SW ++
Sbjct: 459 EGLRLFYGMQLEGVPPNVITWNLIILSLLRNGEVDEAKDMFLQM-QSSGIFPNLISWTTM 517

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-S 530
           + G  Q G    A+   RKMQ S   PN V+I   L ACA L + +  + IHG ++R   
Sbjct: 518 MNGMVQNGCSEEAILFLRKMQESGLRPNAVSITVALSACANLASLHFGRSIHGYIIRNLQ 577

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
             SS+ +  SL+D YAK G+I  +  +F      ++  +N++I  Y L+G    A+ L+ 
Sbjct: 578 HSSSVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLYNAMISAYALYGNLKEAIALYR 637

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
            ++  GLKP+  T  +++ A + AG  +   ++   +   + + P +EHY  M+DL   +
Sbjct: 638 SLEGVGLKPDNITITNVLSACNHAGDNNQATEIVTEMVSKHGMNPCLEHYGLMVDLLASA 697

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           G+ ++A+  IE+MP +PD+ + ++L+ +C      +L      +L + EP +      I 
Sbjct: 698 GQTDKALRLIEEMPYKPDARMIQSLVASCNKQPKSELVDYLSRQLIESEPDNSGNYVTIS 757

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL-VYTFVT 754
             YA+ G  ++ +K+R++ +    +   G  WI++K   V+ FV 
Sbjct: 758 NAYAVEGSWDEVVKMREIMKAKGLKKKPGCSWIQIKGEGVHVFVA 802



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 199/433 (45%), Gaps = 42/433 (9%)

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
           K+ +   + P   ++   +S   +NG   +AL L  EM F  +          +  C   
Sbjct: 24  KQHDDQALNPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYE 83

Query: 342 KALAMGMEIHSLAVKMG--FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           + L  G +IH+  +K G  +  +  +   L+  Y+KC+ L+ AE +F  ++ ++V+SW +
Sbjct: 84  RDLCTGKQIHARILKNGDFYAKNEYIETKLVIFYAKCDALDIAEVLFTKLRVRNVFSWAA 143

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDV-PPNVITWNVL--------------ISGY-IQNG 443
           +I   C+ G C  A   F++M E+++ P N +  NV               + GY ++ G
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAG 203

Query: 444 NED------EAVDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFR 489
            ED         D++ + G  D  +        RN  +WN+L+ GY Q G    A+ +F 
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFS 263

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
            M+     P  VT+ + L A A +    + K+ H   +   LE    +  SL++ Y K G
Sbjct: 264 DMRKEGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVG 323

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
            I Y+  +FD M  KD++TWN +I GYV  G    A+ +   M+   LK +  T  +++ 
Sbjct: 324 LIEYAEMVFDRMIDKDVVTWNLIISGYVQQGLVENAIYMCQLMRLEKLKYDCVTLATLMS 383

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEH----YSAMIDLYGRSGKLEEAMEFIEDMPI 665
           A +    + LGK+V     +CY I    E      S ++D+Y + G + +A +   D   
Sbjct: 384 AAARTQNLKLGKEV-----QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF-DSTA 437

Query: 666 EPDSSIWEALLTA 678
           E D  +W  LL A
Sbjct: 438 EKDLILWNTLLAA 450



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 3/198 (1%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--N 84
           T ++ +  NG   EAI  L  +   G +    +    L AC +  S+H  R +H ++  N
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKMQESGLRPNAVSITVALSACANLASLHFGRSIHGYIIRN 575

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
           L     V ++T L+ +YAKCG ++ A +VF       L  ++AMI AY+     +E + L
Sbjct: 576 LQHSSSVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLYNAMISAYALYGNLKEAIAL 635

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGD-FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           +  +   GL PD+     +L AC + GD  +A +++  +V K GM+        ++ +  
Sbjct: 636 YRSLEGVGLKPDNITITNVLSACNHAGDNNQATEIVTEMVSKHGMNPCLEHYGLMVDLLA 695

Query: 204 KCGKLIWARRFFESMDEK 221
             G+   A R  E M  K
Sbjct: 696 SAGQTDKALRLIEEMPYK 713


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 256/838 (30%), Positives = 409/838 (48%), Gaps = 102/838 (12%)

Query: 117 MRERNLY-TWSAMIGAYSRDQRWREVVELFFLMVQDGLFP--DDFLFPKILQACGNCGDF 173
           +R R+L  T+S + G  SR+    E ++     +     P  D +   + LQ C   GD 
Sbjct: 2   IRSRSLLPTFSQINGLLSRNLAANEALQWLDDELASLALPKLDSYACARFLQRCIARGDA 61

Query: 174 EAGKLMHSLVIKLGMSCVRRV--RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
            AG+ +H+ V++ G          N +L  Y K G L  ARR F+ M E++ V++ +++ 
Sbjct: 62  RAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQ 121

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG--- 288
           GY   GE +EA  LF ++ RE  ++       +++    +    +A  +      LG   
Sbjct: 122 GYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDR 181

Query: 289 ----------------------------ITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
                                       +  D  TWT M+S +++N     AL+ F +M 
Sbjct: 182 NAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMR 241

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
             G  PN   +TSA+ A   L +  +G  IH  +VK  +  +  VG +L++MY+KC ++E
Sbjct: 242 MTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIE 301

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN------------ 428
            A  +F+MI   DV  W+ +I+ Y Q+    +A+E+F++M  S V PN            
Sbjct: 302 DAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACA 361

Query: 429 -----------------------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
                                  +   N L+  Y +  N + ++++F  +   ++V    
Sbjct: 362 NIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEV---- 417

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
            SWN++I GY Q G   +AL VF +M+++      VT  SVL ACA   +     +IH  
Sbjct: 418 -SWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSL 476

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
           + + +  +   V NSLIDTYAK G I  +  +F+ +   D+++WNS+I  Y LHG    A
Sbjct: 477 IEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNA 536

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           L+LFD+M    +K N  TF+S++      G+V+ G  +F S+   ++I P +EHY+ ++ 
Sbjct: 537 LELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCIVR 596

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           L GR+G+L +A++FI D+P  P   +W ALL++C +H N+ L   A E++ D+EP D   
Sbjct: 597 LLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHDETT 656

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDL- 764
             L+  +YA  G  ++    RK  R    +   G  W+E+K  V+ F  G  S  + D+ 
Sbjct: 657 YVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVG--SADHPDMR 714

Query: 765 ----LYSWLQ-------NVPE-NVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGS 812
               +  WL         VP+ NV          ++EEEK  +  +HSE+LALA+ L   
Sbjct: 715 IINAMLEWLNLKASREGYVPDINVVLHD------VDEEEKARMLWVHSERLALAYGL--- 765

Query: 813 SQAP--HTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S  P  H IRI+KN+R C+ CH   K +S +   EI + D    HHF+ G CSCGDYW
Sbjct: 766 SMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQREIIVRDINRFHHFEEGICSCGDYW 823



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 172/692 (24%), Positives = 308/692 (44%), Gaps = 105/692 (15%)

Query: 5   ILTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYI--N 62
           +L TF Q++ LL++                N   NEA+  LD      A  + ++Y    
Sbjct: 7   LLPTFSQINGLLSR----------------NLAANEALQWLDDELASLALPKLDSYACAR 50

Query: 63  LLQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
            LQ CI        R +HA +     V ++D F    LL+ YAK G L  AR +F+ M E
Sbjct: 51  FLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATARRLFDGMPE 110

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           RN  ++  ++  Y+    + E +ELF  + ++G   + F+   IL+             +
Sbjct: 111 RNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGI 170

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H+   KLG      V  +++  Y  CG +  AR  F+ +  KD V W +M+S Y +    
Sbjct: 171 HACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIP 230

Query: 240 DEAHRLFDKM--------------------CREEIKLG-------VVTF--------NIL 264
           + A   F KM                    C     LG       V T           L
Sbjct: 231 EYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVGGAL 290

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
           +  Y + G  + A  + + +       DV  W+ +IS +AQ+ +  QA ++F  M    V
Sbjct: 291 LDMYAKCGDIEDAHAIFEMIPH----DDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFV 346

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
           +PN  +++  + AC ++  L +G +IH+LA+K+G+  ++ VGN+L++MY+KC  +E +  
Sbjct: 347 VPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLE 406

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------ 432
           +F  ++D +  SWN++I GYCQ+G+   A  +F +M+ + +    +T+            
Sbjct: 407 IFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSS 466

Query: 433 -----------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
                                  N LI  Y + G   +A+ +F+ + + D V     SWN
Sbjct: 467 IKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVV-----SWN 521

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK-VKEIHGCVLR 528
           S+I+ Y   G+  NAL +F +M  S    N VT +S+L  C      N+ +   +  ++ 
Sbjct: 522 SIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMD 581

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYS-RTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
             ++ S+     ++    ++G +  + + I D  S+   + W +L+   V+H   + AL 
Sbjct: 582 HRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHK--NVALG 639

Query: 588 LFDQMKSFGLKP-NRGTFLSIILAHSLAGMVD 618
            +   K   ++P +  T++ +   ++ AG++D
Sbjct: 640 RYAAEKVLDIEPHDETTYVLLSNMYAAAGILD 671


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  384 bits (987), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 239/745 (32%), Positives = 380/745 (51%), Gaps = 79/745 (10%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N++++ YV  G+L+ AR  F+    K  + W+S+ISGY + G   EA  LF  M  E  K
Sbjct: 100 NTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWK 159

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT-------------------- 295
               T   ++R  + LG       +   +   G   +VF                     
Sbjct: 160 ASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFL 219

Query: 296 -------------WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
                        WT M++G+AQNG   +A++ F+ M   GV  N  T  + ++AC+ + 
Sbjct: 220 FKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVL 279

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           A   G ++H   VK GF  +V V ++L++MY+KC +L+ A+ + + ++D DV SWNS++ 
Sbjct: 280 ARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMV 339

Query: 403 GYCQAGYCGKAYELFIKMQESDVP------PNVITW------------------------ 432
           G+ + G   +A  LF  M   ++       P+V+                          
Sbjct: 340 GFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYK 399

Query: 433 ---NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
              N L+  Y + G+ D A  +F++M     ++++  SW SL+ GY Q      +L +F 
Sbjct: 400 LVSNALVDMYAKTGDMDCAYTVFEKM-----LEKDVISWTSLVTGYAQNNSHEESLKIFC 454

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
            M+ +   P+   + S+L ACA L      K++H   ++  L  S  V NSL+  YAK G
Sbjct: 455 DMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCG 514

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
            +  +  IF  M  KD+ITW ++I GY  +G    +L  +D M S G +P+  TF+ ++ 
Sbjct: 515 CLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLF 574

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDS 669
           A S AG+VD G+K F  + + Y I P  EHY+ MIDL+GRSGKL+EA + ++ M ++PD+
Sbjct: 575 ACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDA 634

Query: 670 SIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLE 729
           ++W++LL+ACR+H N++LA  A   LF+LEP + +   ++  +Y+   K  D  K+RKL 
Sbjct: 635 TVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLM 694

Query: 730 RENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS-----SHSG 784
           +        G  W+E+ + V TF++          +Y+ +  +   +         S S 
Sbjct: 695 KSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSL 754

Query: 785 LCIEEEEKEEISGIHSEKLALAFALIGS-SQAPHTIRIVKNIRMCVHCHETAKYVSMMHH 843
             +++E KE     HSEKLA+AF L+ +   AP  IRI KN+R+C  CH   KY+S +  
Sbjct: 755 HDMDKEGKEVGLAYHSEKLAVAFGLLAAPPSAP--IRIFKNLRVCGDCHSAMKYISRVFT 812

Query: 844 CEIFLADSKCLHHFKNGQCSCGDYW 868
             I L DS C HHF+ G+CSCGDYW
Sbjct: 813 RHIILRDSNCFHHFREGECSCGDYW 837



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 152/620 (24%), Positives = 269/620 (43%), Gaps = 102/620 (16%)

Query: 42  ITVLDSIATQGAKVRRNTYIN--LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLS 99
           +  L SI T  A    + Y    LL     S  ++ ARKL    + + + D +    ++S
Sbjct: 48  MAFLRSIHTTTAASYESIYQTNQLLNQLSKSGQVNDARKL---FDKMPQKDEYSWNTMIS 104

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
            Y   G L +ARE+F+    ++  TWS++I  Y +     E  +LF  M  +G     F 
Sbjct: 105 SYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFT 164

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM- 218
              +L+ C + G  + G+++H  V+K G      V   ++ +Y KC  +  A   F+ + 
Sbjct: 165 LGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLE 224

Query: 219 -DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------------- 261
            D K+ V W +M++GY Q G+  +A   F  M  + ++    TF                
Sbjct: 225 FDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFG 284

Query: 262 --------------NILIRS-----YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
                         N+ ++S     Y + G    A  M++ ME      DV +W  ++ G
Sbjct: 285 EQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMED----DDVVSWNSLMVG 340

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           F ++G   +AL LFK M    +  +  T  S ++ C  +        +H L +K GF + 
Sbjct: 341 FVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC--VVGSINPKSVHGLIIKTGFENY 398

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
            LV N+L++MY+K  +++ A  VF+ + +KDV SW S++ GY Q     ++ ++F  M+ 
Sbjct: 399 KLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRV 458

Query: 423 SDVPPNVI-----------------------------------TWNVLISGYIQNGNEDE 447
           + V P+                                      +N L++ Y + G  D+
Sbjct: 459 TGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDD 518

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           A  +F  M   D +     +W ++I GY Q G+  N+L  +  M SS   P+ +T + +L
Sbjct: 519 ADAIFVSMQVKDVI-----TWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLL 573

Query: 508 PACAY--LVASNK-----VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
            AC++  LV   +     + +++G      ++        +ID + +SG +  ++ + D 
Sbjct: 574 FACSHAGLVDEGRKYFQQMNKVYG------IKPGPEHYACMIDLFGRSGKLDEAKQLLDQ 627

Query: 561 MSSK-DIITWNSLICGYVLH 579
           M  K D   W SL+    +H
Sbjct: 628 MDVKPDATVWKSLLSACRVH 647



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 186/407 (45%), Gaps = 44/407 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NG   +A+     +  QG +  + T+  +L AC    +     ++H F+       +V+V
Sbjct: 243 NGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYV 302

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           ++ L+ +YAKCG L +A+ + E M + ++ +W++++  + R     E + LF  M    +
Sbjct: 303 QSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNM 362

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             DD+ FP +L  C   G     K +H L+IK G    + V N+++ +Y K G +  A  
Sbjct: 363 KIDDYTFPSVLNCC-VVGSINP-KSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYT 420

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------CRE--- 252
            FE M EKD ++W S+++GY Q   ++E+ ++F  M                  C E   
Sbjct: 421 VFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTL 480

Query: 253 -----EIKLGVV---------TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
                ++ L  +          +N L+  Y + G  D A  +   M+      DV TWT 
Sbjct: 481 LEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQ----VKDVITWTA 536

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM- 357
           +I G+AQNG+   +L  +  M   G  P+ +T    + AC+    +  G +      K+ 
Sbjct: 537 IIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVY 596

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIAG 403
           G          +I+++ +  +L+ A+++ D +  K D   W S+++ 
Sbjct: 597 GIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSA 643


>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
 gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
          Length = 539

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 212/556 (38%), Positives = 321/556 (57%), Gaps = 32/556 (5%)

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
           + + P+ V++ + + AC  + A   G  +H +AV+ G  +D+ VGN+L++MY+KC  ++ 
Sbjct: 7   IDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDE 66

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
           A +VFD IK+KDV SWN+M+ GY Q G    A  LF KM+E ++  NV++W+ +I+ + Q
Sbjct: 67  ASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQ 126

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM--QSSCFYPN 499
            G   E +D+F+ M                     Q G+ N+AL +F  M  Q     PN
Sbjct: 127 RGLGCETLDVFREM---------------------QHGEANDALELFSWMFKQDGLVKPN 165

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS-LPVMNSLIDTYAKSGNIVYSRTIF 558
           C TI   L ACA L A    ++IH  +LR   +S+ L V N LID YAKSG+I  +R +F
Sbjct: 166 CFTISCALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVF 225

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           D +  K+ ++W SL+ GY +HG    AL++FD+M+  GL+P+  T L ++ A S +GM+D
Sbjct: 226 DNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMID 285

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            G + F S+++ + +IP  EHY+ M+DL GR+G+L EAME IE M +EP S +W ALL+ 
Sbjct: 286 QGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQMEPSSIVWVALLSG 345

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
           CRIH N++L   A ++L +L   +     L+  IYA   + +D  +VR L + +  R   
Sbjct: 346 CRIHANVELGEHAAKQLLELNSENDGSYTLLSNIYANARRWKDVARVRSLMKNSGIRKRP 405

Query: 739 GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKE 793
           G  W++ K    TF     +   S  +Y  L+++ + +        +S +   +++EEK 
Sbjct: 406 GCSWVQGKKGTTTFYVADKTHPQSKQIYEILRSLTQRIKVLGYVPETSFALHDVDDEEKV 465

Query: 794 EISGIHSEKLALAFA-LIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
           ++   HSEKLALA+  LI +  AP  IRI KN+R+C  CH    Y+SM+   EI L DS 
Sbjct: 466 DLLFEHSEKLALAYGILISAPGAP--IRITKNLRVCGDCHNAITYISMIIDHEIILRDSS 523

Query: 853 CLHHFKNGQCSCGDYW 868
             HHFK G CSC  YW
Sbjct: 524 RFHHFKKGSCSCSGYW 539



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 184/359 (51%), Gaps = 26/359 (7%)

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD      +L AC + G +  GK +H + ++ G      V N+++ +Y KCG +  A + 
Sbjct: 11  PDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKV 70

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F+ + EKD V+WN+M++GY QIG  ++A  LF+KM  E I+L VV+++ +I ++ Q G  
Sbjct: 71  FDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLG 130

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG--VMPNGVTIT 332
              +++ + M                    Q+G  + AL+LF  M      V PN  TI+
Sbjct: 131 CETLDVFREM--------------------QHGEANDALELFSWMFKQDGLVKPNCFTIS 170

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVL-VGNSLINMYSKCEELEAAERVFDMIKD 391
            A+ AC  L AL +G +IH+  ++  F    L V N LI+MY+K  +++ A  VFD +K 
Sbjct: 171 CALIACARLAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQ 230

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
           K+  SW S++ GY   G   +A E+F +M+   + P+ +T  V++     +G  D+ ++ 
Sbjct: 231 KNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEF 290

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           F  M K   V      +  ++    + G+ N A+ +   MQ     P+ +  +++L  C
Sbjct: 291 FNSMSKEFGVIPGQEHYACMVDLLGRAGRLNEAMELIEGMQ---MEPSSIVWVALLSGC 346



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 171/391 (43%), Gaps = 59/391 (15%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           + +N+L AC    +    + +H          D+FV   L+ +YAKCG +D+A +VF+ +
Sbjct: 15  SLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAKCGMVDEASKVFDRI 74

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELF-------------------------------- 145
           +E+++ +W+AM+  YS+  R+ + + LF                                
Sbjct: 75  KEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIELNVVSWSAVIAAFAQRGLGCETL 134

Query: 146 -------------------FLMVQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSLVIK 185
                              ++  QDGL  P+ F     L AC        G+ +H+ +++
Sbjct: 135 DVFREMQHGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILR 194

Query: 186 LGM-SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHR 244
               S    V N ++ +Y K G +  AR  F+++ +K+ V+W S+++GY   G   EA  
Sbjct: 195 NHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALE 254

Query: 245 LFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGF 303
           +FD+M R  ++   VT  +++ + +  G  D  +E    M +  G+ P    + CM+   
Sbjct: 255 VFDEMRRVGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLL 314

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
            + GR ++A++L + M    + P+ +   + +S C     + +G       +++   +D 
Sbjct: 315 GRAGRLNEAMELIEGMQ---MEPSSIVWVALLSGCRIHANVELGEHAAKQLLELNSENDG 371

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
                L N+Y+     +   RV  ++K+  +
Sbjct: 372 SY-TLLSNIYANARRWKDVARVRSLMKNSGI 401



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 104/204 (50%), Gaps = 6/204 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYI--NLLQACIDSNSIHLARKLHAFL--NLVTEID 90
           +G  N+A+ +   +  Q   V+ N +     L AC    ++ L R++HA++  N      
Sbjct: 142 HGEANDALELFSWMFKQDGLVKPNCFTISCALIACARLAALRLGRQIHAYILRNHFDSAF 201

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           ++V   L+ +YAK G +D AR VF++++++N  +W++++  Y    R +E +E+F  M +
Sbjct: 202 LYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRR 261

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            GL PD      +L AC + G  + G +  +S+  + G+   +     ++ +  + G+L 
Sbjct: 262 VGLQPDGVTLLVVLYACSHSGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGRAGRLN 321

Query: 210 WARRFFESMD-EKDGVAWNSMISG 232
            A    E M  E   + W +++SG
Sbjct: 322 EAMELIEGMQMEPSSIVWVALLSG 345


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 222/624 (35%), Positives = 342/624 (54%), Gaps = 56/624 (8%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           ++ TWT MI+ FAQ G    A+DLF +M   G +P+  T +S +SACT+L  LA+G ++H
Sbjct: 20  NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLH 79

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCE---ELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           S  +++G   DV VG SL++MY+KC     ++ + +VF+ + + +V SW ++I  Y Q+G
Sbjct: 80  SRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSG 139

Query: 409 YCGK-AYELFIKMQESDVPPNVITW----------------------------------- 432
            C K A ELF KM    + PN  ++                                   
Sbjct: 140 ECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVG 199

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           N LIS Y ++G  ++A   F  +      ++N  S+N+++ GY +  +   A  +F ++ 
Sbjct: 200 NSLISMYARSGRMEDARKAFDIL-----FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIA 254

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
            +    +  T  S+L   A + A  K ++IHG +L+   +S+  + N+LI  Y++ GNI 
Sbjct: 255 DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIE 314

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            +  +F+ M  +++I+W S+I G+  HGF   AL++F +M   G KPN  T+++++ A S
Sbjct: 315 AAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACS 374

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
             GM+  G+K F S+ + + I+P +EHY+ M+DL GRSG L EAMEFI  MP+  D+ +W
Sbjct: 375 HVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVW 434

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
             LL ACR+HGN +L   A E + + EP D     L+  ++A  G+ +D +K+RK  +E 
Sbjct: 435 RTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKER 494

Query: 733 TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--------TARSSHSG 784
                 G  WIEV+N V+ F  G  S   +  +Y  L  +   +        T    H  
Sbjct: 495 NLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHD- 553

Query: 785 LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
             IEEE+KE+    HSEK+A+AF LI +SQ+   IRI KN+R+C  CH   KY+SM    
Sbjct: 554 --IEEEQKEQFLFQHSEKIAVAFGLISTSQSK-PIRIFKNLRVCGDCHTAIKYISMATGR 610

Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
           EI + DS   HH KNG CSC DYW
Sbjct: 611 EIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 198/391 (50%), Gaps = 43/391 (10%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A +VF+ M ERNL TW+ MI  +++    R+ ++LF  M   G  PD F +  +L AC  
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC---GKLIWARRFFESMDEKDGVAW 226
            G    GK +HS VI+LG++    V  S++ +Y KC   G +  +R+ FE M E + ++W
Sbjct: 69  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128

Query: 227 NSMISGYFQIGEND-EAHRLFDKMCREEI------------------------------- 254
            ++I+ Y Q GE D EA  LF KM    I                               
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188

Query: 255 KLGVVTFNI----LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTS 310
           KLG+ + N     LI  Y + G+    ME  ++   +    ++ ++  ++ G+A+N ++ 
Sbjct: 189 KLGIASVNCVGNSLISMYARSGR----MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 244

Query: 311 QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI 370
           +A  LF E++  G+  +  T  S +S    + A+  G +IH   +K G+  +  + N+LI
Sbjct: 245 EAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALI 304

Query: 371 NMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
           +MYS+C  +EAA +VF+ ++D++V SW SMI G+ + G+  +A E+F KM E+   PN I
Sbjct: 305 SMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEI 364

Query: 431 TWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
           T+  ++S     G   E    F  M K   +
Sbjct: 365 TYVAVLSACSHVGMISEGQKHFNSMYKEHGI 395



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 238/478 (49%), Gaps = 53/478 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           G   +AI +   +   G    R TY ++L AC +   + L ++LH+  + L   +DV V 
Sbjct: 35  GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVG 94

Query: 95  TKLLSVYAKC---GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRW-REVVELFFLMVQ 150
             L+ +YAKC   G +DD+R+VFE M E N+ +W+A+I AY++     +E +ELF  M+ 
Sbjct: 95  CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMIS 154

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
             + P+ F F  +L+ACGN  D   G+ ++S  +KLG++ V  V NS++++Y + G++  
Sbjct: 155 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMED 214

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------- 261
           AR+ F+ + EK+ V++N+++ GY +  +++EA  LF+++    I +   TF         
Sbjct: 215 ARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAAS 274

Query: 262 --------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                                     N LI  Y++ G  + A ++   ME      +V +
Sbjct: 275 IGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMED----RNVIS 330

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLA 354
           WT MI+GFA++G  ++AL++F +M   G  PN +T  + +SAC+ +  ++ G +  +S+ 
Sbjct: 331 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 390

Query: 355 VKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQA---GYC 410
            + G    +     ++++  +   L EA E +  M    D   W +++ G C+       
Sbjct: 391 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL-GACRVHGNTEL 449

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           G+     I  QE D P   I  + L   +   G   + V + + M + + +K    SW
Sbjct: 450 GRHAAEMILEQEPDDPAAYILLSNL---HASAGQWKDVVKIRKSMKERNLIKEAGCSW 504


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 222/624 (35%), Positives = 342/624 (54%), Gaps = 56/624 (8%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           ++ TWT MI+ FAQ G    A+DLF +M   G +P+  T +S +SACT+L  LA+G ++H
Sbjct: 15  NLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLH 74

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCE---ELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           S  +++G   DV VG SL++MY+KC     ++ + +VF+ + + +V SW ++I  Y Q+G
Sbjct: 75  SRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSG 134

Query: 409 YCGK-AYELFIKMQESDVPPNVITW----------------------------------- 432
            C K A ELF KM    + PN  ++                                   
Sbjct: 135 ECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVG 194

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           N LIS Y ++G  ++A   F  +      ++N  S+N+++ GY +  +   A  +F ++ 
Sbjct: 195 NSLISMYARSGRMEDARKAFDIL-----FEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIA 249

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
            +    +  T  S+L   A + A  K ++IHG +L+   +S+  + N+LI  Y++ GNI 
Sbjct: 250 DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIE 309

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            +  +F+ M  +++I+W S+I G+  HGF   AL++F +M   G KPN  T+++++ A S
Sbjct: 310 AAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACS 369

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
             GM+  G+K F S+ + + I+P +EHY+ M+DL GRSG L EAMEFI  MP+  D+ +W
Sbjct: 370 HVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVW 429

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
             LL ACR+HGN +L   A E + + EP D     L+  ++A  G+ +D +K+RK  +E 
Sbjct: 430 RTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKER 489

Query: 733 TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--------TARSSHSG 784
                 G  WIEV+N V+ F  G  S   +  +Y  L  +   +        T    H  
Sbjct: 490 NLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHD- 548

Query: 785 LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
             IEEE+KE+    HSEK+A+AF LI +SQ+   IRI KN+R+C  CH   KY+SM    
Sbjct: 549 --IEEEQKEQFLFQHSEKIAVAFGLISTSQSK-PIRIFKNLRVCGDCHTAIKYISMATGR 605

Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
           EI + DS   HH KNG CSC DYW
Sbjct: 606 EIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 198/391 (50%), Gaps = 43/391 (10%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A +VF+ M ERNL TW+ MI  +++    R+ ++LF  M   G  PD F +  +L AC  
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC---GKLIWARRFFESMDEKDGVAW 226
            G    GK +HS VI+LG++    V  S++ +Y KC   G +  +R+ FE M E + ++W
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 227 NSMISGYFQIGEND-EAHRLFDKMCREEI------------------------------- 254
            ++I+ Y Q GE D EA  LF KM    I                               
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183

Query: 255 KLGVVTFNI----LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTS 310
           KLG+ + N     LI  Y + G+    ME  ++   +    ++ ++  ++ G+A+N ++ 
Sbjct: 184 KLGIASVNCVGNSLISMYARSGR----MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSE 239

Query: 311 QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI 370
           +A  LF E++  G+  +  T  S +S    + A+  G +IH   +K G+  +  + N+LI
Sbjct: 240 EAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALI 299

Query: 371 NMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
           +MYS+C  +EAA +VF+ ++D++V SW SMI G+ + G+  +A E+F KM E+   PN I
Sbjct: 300 SMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEI 359

Query: 431 TWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
           T+  ++S     G   E    F  M K   +
Sbjct: 360 TYVAVLSACSHVGMISEGQKHFNSMYKEHGI 390



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/478 (27%), Positives = 239/478 (50%), Gaps = 53/478 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           G   +AI +   +   G    R TY ++L AC +   + L ++LH+  + L   +DV V 
Sbjct: 30  GCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVG 89

Query: 95  TKLLSVYAKC---GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRW-REVVELFFLMVQ 150
             L+ +YAKC   G +DD+R+VFE M E N+ +W+A+I AY++     +E +ELF  M+ 
Sbjct: 90  CSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMIS 149

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
             + P+ F F  +L+ACGN  D   G+ ++S  +KLG++ V  V NS++++Y + G++  
Sbjct: 150 GHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMED 209

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------- 261
           AR+ F+ + EK+ V++N+++ GY +  +++EA  LF+++    I +   TF         
Sbjct: 210 ARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAAS 269

Query: 262 --------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                                     N LI  Y++ G  + A ++   ME      +V +
Sbjct: 270 IGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMED----RNVIS 325

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLA 354
           WT MI+GFA++G  ++AL++F +M   G  PN +T  + +SAC+ +  ++ G +  +S+ 
Sbjct: 326 WTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 385

Query: 355 VKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQA---GYC 410
            + G    +     ++++  +   L EA E +  M    D   W +++ G C+       
Sbjct: 386 KEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL-GACRVHGNTEL 444

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           G+     I  QE D P   I   +L + +   G   + V + + M + + +K    SW
Sbjct: 445 GRHAAEMILEQEPDDPAAYI---LLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSW 499


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 234/769 (30%), Positives = 370/769 (48%), Gaps = 116/769 (15%)

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E + +    +Q GL  D F++ ++L+ C    D  A K +H  +IK  M           
Sbjct: 11  EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRM----------- 59

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
                               E++    N+++  Y + G   EA  +FD + +   K G  
Sbjct: 60  --------------------EQNAHVMNNLLHVYIECGRLQEARCVFDALVK---KSGA- 95

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
                                              +W  MI+G+ ++     A+ LF+EM
Sbjct: 96  -----------------------------------SWNAMIAGYVEHKHAEDAMRLFREM 120

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
              GV PN  T    + AC  L AL  G E+H+     G   DV VG +L+ MY KC  +
Sbjct: 121 CHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSI 180

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------- 432
             A R+FD + + D+ SW  MI  Y Q+G   +AY L ++M++    PN IT+       
Sbjct: 181 NEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNAC 240

Query: 433 ----------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                                         L+  Y ++G+ D+A  +F RM    KV R+
Sbjct: 241 ASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRM----KV-RD 295

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             SWN +I  + + G+ + A  +F +MQ+    P+ +  LS+L ACA   A   VK+IH 
Sbjct: 296 VVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHR 355

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
             L   LE  + V  +L+  Y+KSG+I  +R +FD M  +++++WN++I G   HG    
Sbjct: 356 HALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQD 415

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMI 644
           AL++F +M + G+KP+R TF++++ A S AG+VD G+  + ++T+ Y I P + H + M+
Sbjct: 416 ALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMV 475

Query: 645 DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVL 704
           DL GR+G+L EA  FI++M ++PD + W ALL +CR +GN++L  L  +    L+P +  
Sbjct: 476 DLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAA 535

Query: 705 IQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDL 764
              L+  IYA  GK +    VR + RE   R   G+ WIEV N ++ F+    S      
Sbjct: 536 TYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKE 595

Query: 765 LYSWLQNVPENVTARS--SHSGLCIEE---EEKEEISGIHSEKLALAFALIGSSQAPHTI 819
           +      V E + A      + L ++    ++KE     HSEKLA+ + L+ +    + I
Sbjct: 596 INESKDKVIEKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPG-NPI 654

Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           R+ KN+R+C  CH   K +S +   EI + D+   HHFK+G CSCGDYW
Sbjct: 655 RVFKNLRVCTDCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 235/510 (46%), Gaps = 72/510 (14%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTK 96
           L+EAI VL +   +G       Y+ +L+ C+    +  A+++H   +    E +  V   
Sbjct: 9   LSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNN 68

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           LL VY +CG L +AR VF+ + +++  +W+AMI  Y   +   + + LF  M  +G+ P+
Sbjct: 69  LLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPN 128

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
              +  IL+AC +    + GK +H+ +   G+    RV  ++L +Y KCG +  ARR F+
Sbjct: 129 AGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFD 188

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------------- 261
           ++   D ++W  MI  Y Q G   EA+RL  +M +E  K   +T+               
Sbjct: 189 NLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKW 248

Query: 262 --------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                                 L++ Y + G  D A  +  RM+      DV +W  MI 
Sbjct: 249 VKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMK----VRDVVSWNVMIG 304

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
            FA++GR  +A DLF +M   G  P+ +   S ++AC    AL    +IH  A+  G   
Sbjct: 305 AFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEV 364

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           DV VG +L++MYSK   ++ A  VFD +K ++V SWN+MI+G  Q G    A E+F +M 
Sbjct: 365 DVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMT 424

Query: 422 ESDVPPNVITWNVLISGYIQNGNEDEA-----------------------VDLFQRMGK- 457
              V P+ +T+  ++S     G  DE                        VDL  R G+ 
Sbjct: 425 AHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRL 484

Query: 458 --------NDKVKRNTASWNSLIAGYQQLG 479
                   N  V  + A+W +L+   +  G
Sbjct: 485 MEAKLFIDNMAVDPDEATWGALLGSCRTYG 514



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 209/445 (46%), Gaps = 43/445 (9%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLL 98
           +A+ +   +  +G +    TY+ +L+AC   +++   +++HA + +   E DV V T LL
Sbjct: 112 DAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALL 171

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +Y KCG +++AR +F+++   ++ +W+ MIGAY++    +E   L   M Q+G  P+  
Sbjct: 172 RMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAI 231

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
            +  IL AC + G  +  K +H   +  G+    RV  +++ +Y K G +  AR  F+ M
Sbjct: 232 TYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRM 291

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------------- 261
             +D V+WN MI  + + G   EA+ LF +M  E  K   + F                 
Sbjct: 292 KVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVK 351

Query: 262 ------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
                               L+  Y++ G  D A  +  RM+      +V +W  MISG 
Sbjct: 352 KIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMK----VRNVVSWNAMISGL 407

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH-SLAVKMGFTDD 362
           AQ+G    AL++F+ M+  GV P+ VT  + +SAC+    +  G   + ++    G   D
Sbjct: 408 AQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPD 467

Query: 363 VLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           V   N ++++  +   L  A+   D M  D D  +W +++ G C+     +  EL  K +
Sbjct: 468 VSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALL-GSCRTYGNVELGELVAKER 526

Query: 422 ESDVPPNVITWNVLISGYIQNGNED 446
               P N  T+ +L + Y + G  D
Sbjct: 527 LKLDPKNAATYVLLSNIYAEAGKWD 551



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 161/316 (50%), Gaps = 7/316 (2%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVF 92
           GNG+  EA  ++  +  +G K    TY+++L AC    ++   +++H   L+   E+DV 
Sbjct: 209 GNGK--EAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVR 266

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V T L+ +YAK G +DDAR VF+ M+ R++ +W+ MIGA++   R  E  +LF  M  +G
Sbjct: 267 VGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEG 326

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             PD  +F  IL AC + G  E  K +H   +  G+    RV  +++ +Y K G +  AR
Sbjct: 327 CKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDAR 386

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
             F+ M  ++ V+WN+MISG  Q G   +A  +F +M    +K   VTF  ++ + +  G
Sbjct: 387 VVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAG 446

Query: 273 QCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
             D        M  + GI PDV    CM+    + GR  +A      M+   V P+  T 
Sbjct: 447 LVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMA---VDPDEATW 503

Query: 332 TSAISACTDLKALAMG 347
            + + +C     + +G
Sbjct: 504 GALLGSCRTYGNVELG 519


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 237/779 (30%), Positives = 388/779 (49%), Gaps = 85/779 (10%)

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
           Q   N  D  AGK +H  ++K G S     +N +L  YV+   L  A + F+ M + + +
Sbjct: 43  QIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTI 102

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR------------------ 266
           ++ ++  GY +  +  +A     ++ +E  ++    F  L++                  
Sbjct: 103 SFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACV 162

Query: 267 -----------------SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT 309
                            +Y+  G  DVA  +   +       D+ +WT M++ +A+N   
Sbjct: 163 YKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDI----CCKDMVSWTGMVACYAENCFY 218

Query: 310 SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL 369
            ++L LF +M  +G  PN  TI+ A+ +C  L+A  +G  +H  A+K  +  D+ VG +L
Sbjct: 219 EESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIAL 278

Query: 370 INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           + +Y+K  E+  A+R+F+ +   D+  W+ MIA Y Q+    +A +LF++M+++ V PN 
Sbjct: 279 LELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNN 338

Query: 430 ITW------------------------------NVLISG-----YIQNGNEDEAVDLFQR 454
            T+                              NV +S      Y + G  + ++ LF+ 
Sbjct: 339 FTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEE 398

Query: 455 MGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV 514
           +       RN  +WN++I GY QLG    A+ +F  M      P  VT  SVL A A L 
Sbjct: 399 LPD-----RNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLA 453

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
           A     +IH   ++        V NSLID YAK G I  +R  FD M+ +D ++WN++IC
Sbjct: 454 ALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMIC 513

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
           GY +HG    AL+LFD M+    KPN+ TF+ ++ A S AG++  G+  F S+++ Y I 
Sbjct: 514 GYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIK 573

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER 694
           P IEHY+ M+ L GR G+ +EAM+ I ++  +P   +W ALL AC IH  +DL  +  + 
Sbjct: 574 PCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQH 633

Query: 695 LFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           + ++EP D     L+  +YA  G+ ++   VRK  ++   R   G  W+E + +V+ F  
Sbjct: 634 VLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSV 693

Query: 755 GGWSESYSDL---LYSWLQNVPENVTARSSHSG--LCIEEEEKEEISGIHSEKLALAFAL 809
           G  S     L   +  WL     +       +   L ++++EKE    +HSE+LALA+ L
Sbjct: 694 GDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVHSERLALAYGL 753

Query: 810 IGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           I +  +  +IRI+KN+R+C+ CH   K +S +   EI + D    HHF++G CSCGDYW
Sbjct: 754 IRTPLSC-SIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHGVCSCGDYW 811



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/551 (26%), Positives = 253/551 (45%), Gaps = 91/551 (16%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARK-LHA-FLNLVTEID 90
           C N    + ++ LDS          ++Y ++LQ  I + +  +A K LH   L   T +D
Sbjct: 20  CRNIHHQQCLSALDS----------HSYAHMLQQIIRNGADPIAGKHLHCHILKRGTSLD 69

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +F +  LL+ Y +   L DA ++F++M + N  ++  +   YSRD ++ + +     + +
Sbjct: 70  LFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFK 129

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           +G   + F+F  +L+   +         +H+ V KLG      V  +++  Y   G +  
Sbjct: 130 EGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDV 189

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK-------------LG 257
           AR  F+ +  KD V+W  M++ Y +    +E+ +LF++M     K             LG
Sbjct: 190 ARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLG 249

Query: 258 VVTFNI----------------------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
           +  FN+                      L+  Y + G+   A  + + M    + P    
Sbjct: 250 LEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIP---- 305

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W+ MI+ +AQ+ R+ +ALDLF  M    V+PN  T  S + AC    +L +G +IHS  +
Sbjct: 306 WSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVL 365

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K G   +V V N+++++Y+KC E+E + ++F+ + D++  +WN++I GY Q G   +A  
Sbjct: 366 KFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMN 425

Query: 416 LFIKMQESDVPPNVITW-----------------------------------NVLISGYI 440
           LF  M E D+ P  +T+                                   N LI  Y 
Sbjct: 426 LFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYA 485

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           + G  ++A   F +M K D+V     SWN++I GY   G    AL +F  MQ +   PN 
Sbjct: 486 KCGRINDARLTFDKMNKRDEV-----SWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNK 540

Query: 501 VTILSVLPACA 511
           +T + VL AC+
Sbjct: 541 LTFVGVLSACS 551



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 241/510 (47%), Gaps = 43/510 (8%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKT 95
           + ++A+  +  I  +G +V    +  LL+  +  +  HL   LHA    L    D FV T
Sbjct: 116 QFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGT 175

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            L+  Y+  G +D AR VF+D+  +++ +W+ M+  Y+ +  + E ++LF  M   G  P
Sbjct: 176 ALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKP 235

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           ++F     L++C     F  GK +H   +K        V  ++L +Y K G++I A+R F
Sbjct: 236 NNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLF 295

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           E M + D + W+ MI+ Y Q   + EA  LF +M     +  VV  N    S  Q     
Sbjct: 296 EEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRM----RQTSVVPNNFTFASVLQACASS 351

Query: 276 VAMEMVKRMES----LGITPDVF-------------------------------TWTCMI 300
           V++++ K++ S     G+  +VF                               TW  +I
Sbjct: 352 VSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTII 411

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
            G+ Q G   +A++LF  M    + P  VT +S + A   L AL  G++IHSL +K  + 
Sbjct: 412 VGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYN 471

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D +V NSLI+MY+KC  +  A   FD +  +D  SWN+MI GY   G   +A  LF  M
Sbjct: 472 KDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMM 531

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
           Q +D  PN +T+  ++S     G   +    F+ M K+  +K     +  ++    +LG+
Sbjct: 532 QHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGR 591

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            + A+ +  ++    + P+ +   ++L AC
Sbjct: 592 FDEAMKLIGEI---AYQPSVMVWRALLGAC 618


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 266/887 (29%), Positives = 432/887 (48%), Gaps = 86/887 (9%)

Query: 60  YINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           Y +LL    DS S+ L +++HA +     +   F+   L+ +Y  CG L DA+  F+ M 
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGK 177
            ++  TW+ +I A+ +     + + LF  M  +G+ P +  F  +L AC    +  E G+
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H ++    M     V  ++L +Y KC  +  AR+ F+ +  K  V WN+MI+ Y Q  
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILI---------------------RSYNQLGQCDV 276
            +++A ++F  M  E +K   +TF  ++                     R ++ L     
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 277 AMEMVKRMESLGITPDVFTW-----------TCMISGFAQNGRTSQALDLFKEMSFVGVM 325
           A  +V    S G     F             T MI+ + Q  R  +AL+LFK M   GV 
Sbjct: 241 ATALVNFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVK 300

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
            + +   + ++AC+  + L  G  IH    ++ F   V  GN+LINMY KC  LE A  V
Sbjct: 301 LDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEV 360

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ------------------------ 421
           F  ++ +DV SWN++IA + Q     +A  L   MQ                        
Sbjct: 361 FRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCAASEAL 420

Query: 422 -----------ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
                      ES +  +V+  N ++  Y    + D+A  +F+ M   D+V     SWN+
Sbjct: 421 AKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQV-----SWNA 475

Query: 471 LIAGYQ-QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           +I  Y  Q    + AL +F++MQ   F P+ ++ ++ L ACA   +  + K +H  +   
Sbjct: 476 MITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRET 535

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            LES++ V N++++ YAKSG++V +R +F  M   D+I+WN +I  +  HG     L  F
Sbjct: 536 GLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFF 595

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII-PMIEHYSAMIDLYG 648
            +M   G  PN  TF+S++ A S  G+V  G ++F S+   +  I P  EHY  M+DL  
Sbjct: 596 RRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIA 655

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+GKL+ A +FI   P++PD  I   +L A ++H +++ A  + E L +L P       +
Sbjct: 656 RAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVV 715

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  +Y   GK ++  K+R+L  E   R       I VK  V+ F TG  + + +  +   
Sbjct: 716 LSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEE 775

Query: 769 LQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRI 821
           L+ +   + A++ ++         + +E+K+ +   HSEKLA+AF LI  S AP T +RI
Sbjct: 776 LERLSLEM-AKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLI--STAPGTSLRI 832

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +KN+R+C  CH   K++S +   EI + DS   HHF NG CSCGDYW
Sbjct: 833 IKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879


>gi|347954474|gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium officinale]
          Length = 826

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/764 (29%), Positives = 400/764 (52%), Gaps = 48/764 (6%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV 91
           L  +G + EA+++L  +  +  ++    Y  +LQ C+    +   +++HA   ++   D 
Sbjct: 43  LSKSGEIREALSLLTEMDFRKLRIGPEIYGEILQGCVYERDLCTGKQIHA--RILKNGDF 100

Query: 92  FVK-----TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
           + K     TKL+  YAKC   + +  +F  +R RN+Y+W+A+IG   R     E +  F 
Sbjct: 101 YAKNEYIETKLVIFYAKCDAFEASEVLFSKLRVRNVYSWAAIIGVKCRIGLCEEALMGFV 160

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M+Q+ +FPD+F+ P + +ACG       G+ +H  V+K G+     V +S+  +Y KCG
Sbjct: 161 EMLQNEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKSGLHDCVFVASSLADMYGKCG 220

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----- 261
            L  AR+ F+ + E++ VAWN+++ GY Q G N+EA RL   M +E I+   VT      
Sbjct: 221 VLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLS 280

Query: 262 --------------------------NILIRS----YNQLGQCDVAMEMVKRMESLGITP 291
                                     NIL  S    Y ++G  + A  +  RM    I  
Sbjct: 281 ASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCKVGLIEYAEMIFDRM----IEK 336

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           DV TW  +ISG+ Q G    A+ + + M    +  + VT+++ +SA    + L +G E+ 
Sbjct: 337 DVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAARTQNLKLGKEVQ 396

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
              ++  F  D+++ ++ ++MY+ C  +  A++VFD +  KD+  WN++++ Y ++G  G
Sbjct: 397 CYCIRHSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNTLLSVYAESGLSG 456

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
           +A+ LF +MQ   VPPN ITWN++I  +++NG  +EA ++F +M ++  +  N  SW ++
Sbjct: 457 EAFRLFYEMQLESVPPNAITWNLIILSFLRNGQVNEAKEIFSQM-QSSGIFPNLVSWTTM 515

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR-RS 530
           + G  Q G    A+   RKMQ S   PN  +I   L AC+ L + +  + +HG ++R + 
Sbjct: 516 MNGLVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACSNLASLHFGRSVHGYIIRNQQ 575

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
             SS+ +  SL+D YAK G+I  +  +F      D+  +N++I  Y L+G    A+ L  
Sbjct: 576 HSSSVLIETSLVDMYAKCGDINKAEMVFRSKLCSDLPLYNAMISAYALNGNVKEAIALCR 635

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           +++  G+KP+  TF S++ A + AG V    ++F  +   + I P +EHY  M+D+   +
Sbjct: 636 RLEDTGIKPDNITFTSLLSACNHAGDVSQAVEIFTDMVSKHGIKPCLEHYGLMVDILASA 695

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           G+ ++A+  IE+MP + D+ + ++L+ +C +    +L       L + EP +      I 
Sbjct: 696 GETDKALRLIEEMPYKSDARMIQSLVASCNMKHKTELMDFLSRHLLETEPENSGNYVTIS 755

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
             YA+ G  ++ +K R++ +    + S G  WI +K  V+ FV 
Sbjct: 756 NAYAVEGSWDEVVKTREMMKAKRLKKSPGCSWIRIKGGVHVFVA 799



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 3/198 (1%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--N 84
           T ++ L  NG   EAI  L  +   G +    +    L AC +  S+H  R +H ++  N
Sbjct: 514 TMMNGLVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACSNLASLHFGRSVHGYIIRN 573

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
                 V ++T L+ +YAKCG ++ A  VF      +L  ++AMI AY+ +   +E + L
Sbjct: 574 QQHSSSVLIETSLVDMYAKCGDINKAEMVFRSKLCSDLPLYNAMISAYALNGNVKEAIAL 633

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
              +   G+ PD+  F  +L AC + GD  +A ++   +V K G+         ++ +  
Sbjct: 634 CRRLEDTGIKPDNITFTSLLSACNHAGDVSQAVEIFTDMVSKHGIKPCLEHYGLMVDILA 693

Query: 204 KCGKLIWARRFFESMDEK 221
             G+   A R  E M  K
Sbjct: 694 SAGETDKALRLIEEMPYK 711


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 247/829 (29%), Positives = 404/829 (48%), Gaps = 77/829 (9%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A ++F++   +++  ++ ++  +SR+   RE + LF  +   GL  D       L+ CG 
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
             D   G+ +H   +K G      V  S++ +Y+K       R  F+ M  K+ V+W S+
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIK---------LGVVTFNILIRSYNQLGQ------- 273
           +SGY + G NDE   L ++M  E +          LG +    +I    Q+         
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236

Query: 274 ------CDVAMEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFKE 318
                 C+  + M  + E +G    VF         TW  MI G+A  G   +   +F  
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   GV  +     +A+  C+  + L    ++H   VK G+     +  +L+  YSKC  
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSS 356

Query: 379 LEAAERVFDMI-KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           ++ A ++F M     +V +W +MI G+ Q     KA +LF +M    V PN  T++ +++
Sbjct: 357 VDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLA 416

Query: 438 G-------------------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
           G                               Y++ GN  E+  +F  +   D V     
Sbjct: 417 GKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIV----- 471

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS-NKVKEIHGC 525
           +W++++ G  Q      A+ VF ++      PN  T  SV+ AC+   A+    K+IH  
Sbjct: 472 AWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHAT 531

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
            ++    ++L V ++L+  Y+K GNI  +  +F     +DI++WNS+I GY  HG    A
Sbjct: 532 AVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKA 591

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           L++F  M++ GL  +  TF+ ++ A + AG+V+ G+K F  + + Y I   IEHYS M+D
Sbjct: 592 LEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVD 651

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           LY R+G  ++AM+ I  MP     +IW  LL ACR+H N++L  LA E+L  L+P D + 
Sbjct: 652 LYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVG 711

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
             L+  I+A+ G  E+   VRKL  E   +   G  WIE+KN +++F+ G  S  +SDL+
Sbjct: 712 YVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLV 771

Query: 766 YSWLQNVPENVT-----ARSSHSGLCIEEEEKEEISGIHSEKLALAFALIG-SSQAPHTI 819
           Y+ L+ +   +        +++    +EEE KE I   HSE+LA+A+ LI     AP  I
Sbjct: 772 YAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAP--I 829

Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +I KN+R+C  CH   + +S++    + + DS   HHFK G CSCG YW
Sbjct: 830 QIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 213/618 (34%), Positives = 339/618 (54%), Gaps = 46/618 (7%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFV--GVMPNGVTITSAISACTDLKALAMGME 349
           D   W  +++G+A+NG  S A++    M     G  P+ VT+ S + AC D +AL    E
Sbjct: 81  DRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACRE 140

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H+ A++ G  + V V  ++++ Y KC  +EAA  VFD +  ++  SWN+MI GY   G 
Sbjct: 141 VHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADNGN 200

Query: 410 CGKAYELFIKMQESDV-----------------------------------PPNVITWNV 434
             +A  LF +M +  V                                     NV   N 
Sbjct: 201 ATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNA 260

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           LI+ Y +    D A  +F  +G     K+   SWN++I G+ Q     +A  +F +MQ  
Sbjct: 261 LITTYAKCKRADLAAQVFNELGN----KKTRISWNAMILGFTQNECPEDAERLFARMQLE 316

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              P+  T++SV+PA A +    + + IHG  +R  L+  + V+ +LID Y+K G +  +
Sbjct: 317 NVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIA 376

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           R +FD    + +ITWN++I GY  HGF  AA++LF++MK  G  PN  TFLS++ A S A
Sbjct: 377 RRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHA 436

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G+VD G+K F S+ + Y + P +EHY  M+DL GR+GKL+EA  FI++MPIEP  S++ A
Sbjct: 437 GLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGA 496

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           +L AC++H N++LA  + + +F+L P + +   L+  IYA     +D  +VR    +   
Sbjct: 497 MLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGL 556

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT----ARSSHSGLCIEEE 790
           + + G   I++KN V+TF +G  +  ++  +Y+ L  + E +        + S   +E++
Sbjct: 557 QKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDTDSIHDVEDD 616

Query: 791 EKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLAD 850
            K ++   HSEKLA+A+ LI ++    TI+I KN+R+C  CH   K +S++   EI + D
Sbjct: 617 VKAQLLNTHSEKLAIAYGLIRTAPGT-TIQIKKNLRVCNDCHNATKLISLLTGREIIMRD 675

Query: 851 SKCLHHFKNGQCSCGDYW 868
            +  HHFK+G+CSCGDYW
Sbjct: 676 IQRFHHFKDGKCSCGDYW 693



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 215/492 (43%), Gaps = 48/492 (9%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           T+  LL+ C     +   R +HA L    L +E      T L ++Y KC    DAR VF+
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASE--SIASTALANMYFKCRRPADARRVFD 75

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV--QDGLFPDDFLFPKILQACGNCGDF 173
            M  R+   W+A++  Y+R+      +E    M   + G  PD      +L AC +    
Sbjct: 76  RMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARAL 135

Query: 174 EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
            A + +H+  ++ G+  +  V  +VL  Y KCG +  AR  F+ M  ++ V+WN+MI GY
Sbjct: 136 HACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGY 195

Query: 234 FQIGENDEAHRLFDKMCREEI---------------KLG--------------------V 258
              G   EA  LF +M +E +               +LG                    V
Sbjct: 196 ADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNV 255

Query: 259 VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
              N LI +Y +  + D+A ++      LG      +W  MI GF QN     A  LF  
Sbjct: 256 SVTNALITTYAKCKRADLAAQV---FNELGNKKTRISWNAMILGFTQNECPEDAERLFAR 312

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M    V P+  T+ S I A  D+        IH  +++     DV V  +LI+MYSKC  
Sbjct: 313 MQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGR 372

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           +  A R+FD  +D+ V +WN+MI GY   G+   A ELF +M+ +   PN  T+  +++ 
Sbjct: 373 VSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAA 432

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
               G  DE    F  M K+  ++     + +++    + G+ + A    + M      P
Sbjct: 433 CSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMP---IEP 489

Query: 499 NCVTILSVLPAC 510
                 ++L AC
Sbjct: 490 GISVYGAMLGAC 501



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 165/368 (44%), Gaps = 9/368 (2%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT- 87
           +D    NG   EA+ +   +  +G  V   + +  LQAC +   +   R++H  L  V  
Sbjct: 192 IDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGL 251

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDM-RERNLYTWSAMIGAYSRDQRWREVVELFF 146
             +V V   L++ YAKC   D A +VF ++  ++   +W+AMI  +++++   +   LF 
Sbjct: 252 SSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFA 311

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M  + + PD F    ++ A  +  D    + +H   I+  +     V  +++ +Y KCG
Sbjct: 312 RMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCG 371

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           ++  ARR F+S  ++  + WN+MI GY   G    A  LF++M          TF  ++ 
Sbjct: 372 RVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLA 431

Query: 267 SYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
           + +  G  D   +    M+   G+ P +  +  M+    + G+  +A    K M     +
Sbjct: 432 ACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMP----I 487

Query: 326 PNGVTITSA-ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
             G+++  A + AC   K + +  E   +  ++G  + V     L N+Y+     +   R
Sbjct: 488 EPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVY-HVLLANIYANASMWKDVAR 546

Query: 385 VFDMIKDK 392
           V   ++ K
Sbjct: 547 VRTAMEKK 554



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 101/223 (45%), Gaps = 6/223 (2%)

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P   T  ++L  CA        + +H  +  R L S      +L + Y K      +R +
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKS--FGLKPNRGTFLSIILAHSLAG 615
           FD M S+D + WN+++ GY  +G   +A++   +M+    G +P+  T +S++ A + A 
Sbjct: 74  FDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADAR 133

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
            +   ++V         +  ++   +A++D Y + G +E A    + MP+  +S  W A+
Sbjct: 134 ALHACREVHAFALRA-GLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVR-NSVSWNAM 191

Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
           +     +GN   A+    R+  ++ G  +    +L     CG+
Sbjct: 192 IDGYADNGNATEAMALFWRM--VQEGVDVTDASVLAALQACGE 232


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 251/824 (30%), Positives = 422/824 (51%), Gaps = 91/824 (11%)

Query: 90  DVFVKTKLLSVYAKCGC---LDDAREVFEDMRERNL-YTWSAMIGAYSRDQRWREVVELF 145
           DV   TKL++   + G    L  A+EVFE+       + ++++I  Y+      E + LF
Sbjct: 63  DVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF 122

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M+  G+ PD + FP  L AC        G  +H L++K+G +    V+NS++  Y +C
Sbjct: 123 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 182

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR-EEIKLGVVTFNIL 264
           G+L  AR+ F+ M E++ V+W SMI GY +     +A  LF +M R EE+    VT   +
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242

Query: 265 IRSYNQLGQCDV-------------------------------AMEMVKRMESLGITPDV 293
           I +  +L   +                                A+++ KR+       ++
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
                M S + + G T +AL +F  M   GV P+ +++ SAIS+C+ L+ +  G   H  
Sbjct: 303 DLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGY 362

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            ++ GF     + N+LI+MY KC   + A R+FD + +K                     
Sbjct: 363 VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK--------------------- 401

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
                          V+TWN +++GY++NG  D A + F+ M +     +N  SWN++I+
Sbjct: 402 --------------TVVTWNSIVAGYVENGEVDAAWETFETMPE-----KNIVSWNTIIS 442

Query: 474 GYQQLGQKNNALGVFRKMQSS-CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
           G  Q      A+ VF  MQS      + VT++S+  AC +L A +  K I+  + +  ++
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ 502

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
             + +  +L+D +++ G+   + +IF+ ++++D+  W + I    + G    A++LFD M
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
              GLKP+   F+  + A S  G+V  GK++F S+ + + + P   HY  M+DL GR+G 
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQI 712
           LEEA++ IEDMP+EP+  IW +LL ACR+ GN+++A  A E++  L P       L+  +
Sbjct: 623 LEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNV 682

Query: 713 YAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
           YA  G+  D  KVR   +E   R   G   I+++   + F +G   ES+ ++    ++ +
Sbjct: 683 YASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSG--DESHPEM--PNIEAM 738

Query: 773 PENVTARSSHSG---------LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
            + V+ R+SH G         + ++E+EK  +   HSEKLA+A+ LI S++   TIRIVK
Sbjct: 739 LDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGT-TIRIVK 797

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
           N+R+C  CH  AK+ S +++ EI L D+   H+ + G+CSCGD+
Sbjct: 798 NLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 203/454 (44%), Gaps = 44/454 (9%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T + ++ AC     +    K++AF+ N   E++  + + L+ +Y KC  +D A+ +F++ 
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
              NL   +AM   Y R    RE + +F LM+  G+ PD       + +C    +   GK
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
             H  V++ G      + N+++ +Y+KC +   A R F+ M  K  V WNS+++GY + G
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
           E D A   F+ M  + I                                        +W 
Sbjct: 418 EVDAAWETFETMPEKNI---------------------------------------VSWN 438

Query: 298 CMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
            +ISG  Q     +A+++F  M S  GV  +GVT+ S  SAC  L AL +   I+    K
Sbjct: 439 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 498

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G   DV +G +L++M+S+C + E+A  +F+ + ++DV +W + I     AG   +A EL
Sbjct: 499 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIEL 558

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F  M E  + P+ + +   ++     G   +  ++F  M K   V      +  ++    
Sbjct: 559 FDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLG 618

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           + G    A+ +   M      PN V   S+L AC
Sbjct: 619 RAGLLEEAVQLIEDMP---MEPNDVIWNSLLAAC 649


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 263/884 (29%), Positives = 432/884 (48%), Gaps = 92/884 (10%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           LL     + S+ L   +HA L     +  F +  LLS Y+KC     AR VF++  +   
Sbjct: 10  LLTRYAATQSLFLGAHIHAHLLKSGLLHAF-RNHLLSFYSKCRLPGSARRVFDETPDPCH 68

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            +WS+++ AYS +   RE +  F  M   G+  ++F  P +L+   + G    G  +H++
Sbjct: 69  VSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAG---LGVQVHAV 125

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF-ESMDEKDGVAWNSMISGYFQIGENDE 241
            +  G+S    V N+++A+Y   G +  ARR F E+  +++ V+WN M+S + +     +
Sbjct: 126 AVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSD 185

Query: 242 AHRLFDKMC-----------------------------------REEIKLGVVTFNILIR 266
           A  LF +M                                    R      V T N L+ 
Sbjct: 186 AVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVD 245

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            Y++LG   +A  +  ++       DV +W   ISG   +G    AL+L  +M   G++P
Sbjct: 246 MYSKLGDIHMAALVFGKVPK----TDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVP 301

Query: 327 NGVTITSAISACTDLKALAMGM--EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
           N  T++S + AC    A A  +  +IH   +K     D  +G +L++MY+K   L+ A +
Sbjct: 302 NVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARK 361

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG------ 438
           VF+ I  KD+  WN++I+G    G  G++  LF +M++     N  T   ++        
Sbjct: 362 VFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEA 421

Query: 439 --------------------YIQNGNEDE---------AVDLFQRMGKNDKVKRNTASWN 469
                               ++ NG  D          A  +F+    +     N  ++ 
Sbjct: 422 ISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSD-----NIIAFT 476

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           S+I    Q     +A+ +F +M      P+   + S+L ACA L A  + K++H  +++R
Sbjct: 477 SMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 536

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
              + +   N+L+ TYAK G+I  +   F G+  K +++W+++I G   HG    ALD+F
Sbjct: 537 KFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVF 596

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            +M    + PN  T  S++ A + AG+VD  K  F S+ E + I    EHYS MIDL GR
Sbjct: 597 RRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGR 656

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +GKL++AME +  MP E ++++W ALL A R+H + +L  LA E+LF LEP       L+
Sbjct: 657 AGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEPEKSGTHVLL 716

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
              YA  G  ++  KVRKL +++  +      W+E+K+ V+TF+ G  S   +  +Y+ L
Sbjct: 717 ANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVGDKSHPRARDIYAKL 776

Query: 770 QNVPENVTARSSHSGL-----CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
           + + + ++       L      +++ EKE +   HSE+LA+AFALI S+ A   IR+ KN
Sbjct: 777 EELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVAFALI-STPAGAPIRVKKN 835

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +R+C  CH   K++S +   EI + D    HHF +G CSCGDYW
Sbjct: 836 LRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDYW 879



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 220/491 (44%), Gaps = 34/491 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N R ++A+ +   +   G +     +  ++ AC  S  +   RK+HA  +    + DVF 
Sbjct: 180 NDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFT 239

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y+K G +  A  VF  + + ++ +W+A I         +  +EL   M   GL
Sbjct: 240 ANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGL 299

Query: 154 FPDDFLFPKILQ--ACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            P+ F    IL+  A    G F  G+ +H  +IK        +  +++ +Y K G L  A
Sbjct: 300 VPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDA 359

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R+ FE +  KD + WN++ISG    G + E+  LF +M +E   +   T   +++S   L
Sbjct: 360 RKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASL 419

Query: 272 GQCDVAMEMVKRMESLGITPD-------------------------------VFTWTCMI 300
                  ++    E +G   D                               +  +T MI
Sbjct: 420 EAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMI 479

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +  +Q      A+ LF EM   G+ P+   ++S ++AC  L A   G ++H+  +K  F 
Sbjct: 480 TALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFM 539

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            DV  GN+L+  Y+KC  +E A+  F  + DK V SW++MI G  Q G+  +A ++F +M
Sbjct: 540 TDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRM 599

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
            +  + PN IT   ++      G  DEA   F  M +   + R    ++ +I    + G+
Sbjct: 600 VDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGK 659

Query: 481 KNNALGVFRKM 491
            ++A+ +   M
Sbjct: 660 LDDAMELVNSM 670



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 140/292 (47%), Gaps = 3/292 (1%)

Query: 33  CGNGRLN-EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-D 90
           C +G  + E++++   +  +G+ + R T   +L++     +I    ++HA    +  + D
Sbjct: 381 CSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSD 440

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
             V   L+  Y KC CL  A +VFE+    N+  +++MI A S+     + ++LF  M++
Sbjct: 441 SHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLR 500

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            GL PD F+   +L AC +   +E GK +H+ +IK          N+++  Y KCG +  
Sbjct: 501 KGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIED 560

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A   F  + +K  V+W++MI G  Q G    A  +F +M  E I    +T   ++ + N 
Sbjct: 561 ADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNH 620

Query: 271 LGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
            G  D A      M E  GI      ++CMI    + G+   A++L   M F
Sbjct: 621 AGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPF 672



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 95/205 (46%), Gaps = 9/205 (4%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEI 89
           C +G   +AI +   +  +G +       +LL AC   ++    +++HA L     +T  
Sbjct: 485 CDHG--EDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMT-- 540

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DVF    L+  YAKCG ++DA   F  + ++ + +WSAMIG  ++    +  +++F  MV
Sbjct: 541 DVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMV 600

Query: 150 QDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
            + + P+      +L AC + G   EA     S+    G+       + ++ +  + GKL
Sbjct: 601 DERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKL 660

Query: 209 IWARRFFESMD-EKDGVAWNSMISG 232
             A     SM  E +   W ++++ 
Sbjct: 661 DDAMELVNSMPFEANAAVWGALLAA 685


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 228/682 (33%), Positives = 349/682 (51%), Gaps = 70/682 (10%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N +++ +   G +  AR +F+   EKD V+WN M++ Y + G  +EA  LF+       +
Sbjct: 10  NVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS----RTE 65

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             V+++N L+  Y Q G+   A E+  RM       DV +W  M+SG+A+ G   +A  L
Sbjct: 66  WDVISWNALMSGYVQWGKMSEARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARRL 121

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           F                                             DV    ++++ Y++
Sbjct: 122 FDAAP---------------------------------------VRDVFTWTAVVSGYAQ 142

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
              LE A RVFD + +++  SWN+M+A Y Q     +A ELF  M       NV +WN +
Sbjct: 143 NGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR----NVASWNTM 198

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           ++GY Q G  +EA  +F  M + D V     SW +++A Y Q G     L +F +M    
Sbjct: 199 LTGYAQAGMLEEAKAVFDTMPQKDAV-----SWAAMLAAYSQGGCSEETLQLFIEMGRCG 253

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
            + N      VL  CA + A     ++HG ++R        V N+L+  Y K GN+  +R
Sbjct: 254 EWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDAR 313

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
             F+ M  +D+++WN++I GY  HGF   AL++FD M++   KP+  T + ++ A S +G
Sbjct: 314 NAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG 373

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
           +V+ G   F S+   + +    EHY+ MIDL GR+G+L EA + ++DMP EPDS++W AL
Sbjct: 374 LVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGAL 433

Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
           L A RIH N +L   A E++F+LEP +  +  L+  IYA  GK  DA K+R +  E   +
Sbjct: 434 LGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVK 493

Query: 736 NSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC--------- 786
              G  WIEV+N V+TF  G       + +Y++L    E++  R   +G           
Sbjct: 494 KVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFL----EDLDMRMKKAGYVSATDMVLHD 549

Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
           +EEEEKE +   HSEKLA+A+ ++        IR++KN+R+C  CH   KY+S +    I
Sbjct: 550 VEEEEKEHMLKYHSEKLAVAYGILNIPPG-RPIRVIKNLRVCGDCHNAFKYISAIEGRLI 608

Query: 847 FLADSKCLHHFKNGQCSCGDYW 868
            L DS   HHF+ G CSCGDYW
Sbjct: 609 LLRDSNRFHHFRGGSCSCGDYW 630



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 218/453 (48%), Gaps = 26/453 (5%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           TY  ++ +  +   + LAR    + +L  E D      +L+ Y + G +++AR +F    
Sbjct: 8   TYNVMISSHANHGLVSLARH---YFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT 64

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGK 177
           E ++ +W+A++  Y +  +  E  ELF  M       D   +  ++      GD  EA +
Sbjct: 65  EWDVISWNALMSGYVQWGKMSEARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARR 120

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
           L  +  ++   +       +V++ Y + G L  ARR F++M E++ V+WN+M++ Y Q  
Sbjct: 121 LFDAAPVRDVFTWT-----AVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRR 175

Query: 238 ENDEAHRLFDKM-CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
             DEA  LF+ M CR      V ++N ++  Y Q G  + A  +   M       D  +W
Sbjct: 176 MMDEAKELFNMMPCRN-----VASWNTMLTGYAQAGMLEEAKAVFDTMPQ----KDAVSW 226

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             M++ ++Q G + + L LF EM   G   N       +S C D+ AL  GM++H   ++
Sbjct: 227 AAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIR 286

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G+     VGN+L+ MY KC  +E A   F+ ++++DV SWN+MIAGY + G+  +A E+
Sbjct: 287 AGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEI 346

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F  M+ +   P+ IT   +++    +G  ++ +  F  M  +  V      +  +I    
Sbjct: 347 FDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLG 406

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           + G+   A  + + M    F P+     ++L A
Sbjct: 407 RAGRLAEAHDLMKDMP---FEPDSTMWGALLGA 436



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 149/288 (51%), Gaps = 8/288 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           NG L EA  V D++  + A     ++  ++ A I    +  A++L    N++   +V   
Sbjct: 143 NGMLEEARRVFDAMPERNAV----SWNAMVAAYIQRRMMDEAKEL---FNMMPCRNVASW 195

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             +L+ YA+ G L++A+ VF+ M +++  +W+AM+ AYS+     E ++LF  M + G +
Sbjct: 196 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 255

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            +   F  +L  C +    E G  +H  +I+ G      V N++LA+Y KCG +  AR  
Sbjct: 256 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 315

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           FE M+E+D V+WN+MI+GY + G   EA  +FD M     K   +T   ++ + +  G  
Sbjct: 316 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 375

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           +  +     M    G+T     +TCMI    + GR ++A DL K+M F
Sbjct: 376 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 423


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 225/650 (34%), Positives = 349/650 (53%), Gaps = 71/650 (10%)

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
           SL   P    W  +I  +  +G    +L  F +M   G  P+     S + +CT +K L 
Sbjct: 64  SLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLR 123

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE------------------------- 380
            G  +H   +++G   D+   N+L+NMYSK   LE                         
Sbjct: 124 FGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKES 183

Query: 381 ----AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---- 432
               +  +VF+M+  +D+ SWN++I+G  Q G    A  +  +M  +D+ P+  T     
Sbjct: 184 YYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVL 243

Query: 433 -------NVL----ISGY-IQNGNEDEA------VDLFQRMGKNDKVKR--------NTA 466
                  N+L    I GY I+NG + +       +D++ +  + D   R        +  
Sbjct: 244 PIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGI 303

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           SWNS+IAG  Q G  +  L  F++M  +   PN V+  S++PACA+L   +  K++HG +
Sbjct: 304 SWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYI 363

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           +R   + ++ + ++L+D YAK GNI  +R IFD M   D+++W ++I GY LHG  + A+
Sbjct: 364 IRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAI 423

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
            LF +M+  G+KPN   F++++ A S AG+VD   K F S+T+ Y+IIP +EHY+A+ DL
Sbjct: 424 SLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADL 483

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GR G+LEEA EFI DM IEP  S+W  LL ACR+H NI+LA    ++LF ++P ++   
Sbjct: 484 LGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAY 543

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
            L+  IY+  G+ +DA K+R   R+   +      WIE+KN V+ FV G  S  Y D + 
Sbjct: 544 VLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRIN 603

Query: 767 SWLQNVPENV--------TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
             L+ + E +        T    H    +EEE+K  +   HSE+LA+ F +I S+ A  T
Sbjct: 604 EALKVLLEQMEREGYVLDTTEVLHD---VEEEQKRYLLCSHSERLAITFGII-STPAGTT 659

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IR+ KN+R+CV CH   K++S +   EI + D+   HHFK+G+CSCGD+W
Sbjct: 660 IRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/461 (23%), Positives = 202/461 (43%), Gaps = 61/461 (13%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM-RER 120
            LLQ      S   A++LHA +   +     + + +LS+Y+    L D+  +F  +    
Sbjct: 10  TLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPP 69

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
               W ++I  Y+    +   +  F  M+  G +PD  +FP +L++C    D   G+ +H
Sbjct: 70  TTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVH 129

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKL-----------------IWA------------ 211
             +I+LGM       N+++ +Y K   L                 +++            
Sbjct: 130 GCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSL 189

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R+ FE M ++D V+WN++ISG  Q G +++A  +  +M   +++    T + ++  + + 
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 249

Query: 272 GQCDVAMEMVKRMESLGITPDVF-------------------------------TWTCMI 300
                  E+       G   DVF                               +W  +I
Sbjct: 250 VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSII 309

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +G  QNG   + L  F++M    + PN V+ +S + AC  L  L +G ++H   ++  F 
Sbjct: 310 AGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFD 369

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            +V + ++L++MY+KC  +  A  +FD ++  D+ SW +MI GY   G+   A  LF +M
Sbjct: 370 GNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM 429

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
           +   V PN + +  +++     G  DEA   F  M ++ ++
Sbjct: 430 EVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRI 470



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 160/337 (47%), Gaps = 20/337 (5%)

Query: 60  YINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           Y+NLL+           +++H + +    + DVF+ + L+ +YAKC  +DD+  VF  + 
Sbjct: 249 YVNLLKG----------KEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLP 298

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           + +  +W+++I    ++  + E ++ F  M+   + P+   F  I+ AC +      GK 
Sbjct: 299 QHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQ 358

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H  +I+        + ++++ +Y KCG +  AR  F+ M+  D V+W +MI GY   G 
Sbjct: 359 LHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGH 418

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWT 297
             +A  LF +M  E +K   V F  ++ + +  G  D A +    M +   I P +  + 
Sbjct: 419 AYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYA 478

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            +     + GR  +A +   +M    + P G   ++ ++AC   K + +  ++   + K+
Sbjct: 479 AVADLLGRVGRLEEAYEFISDMH---IEPTGSVWSTLLAACRVHKNIELAEKV---SKKL 532

Query: 358 GFTDDVLVGNSLI--NMYSKCEELEAAERVFDMIKDK 392
              D   +G  ++  N+YS     + A ++   ++DK
Sbjct: 533 FTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDK 569



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 108/466 (23%), Positives = 185/466 (39%), Gaps = 89/466 (19%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DV+ K +  S Y     L   R+VFE M +R++ +W+ +I   +++    + + +   M 
Sbjct: 174 DVYSKKEKESYY-----LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMG 228

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
              L PD F    +L       +   GK +H   I+ G      + +S++ +Y KC ++ 
Sbjct: 229 NADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVD 288

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------- 261
            + R F  + + DG++WNS+I+G  Q G  DE  + F +M   +IK   V+F        
Sbjct: 289 DSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACA 348

Query: 262 ----------------------NILIRS-----YNQLGQCDVAMEMVKRMESLGITPDVF 294
                                 N+ I S     Y + G    A  +  +ME      D+ 
Sbjct: 349 HLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELY----DMV 404

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +WT MI G+A +G    A+ LFK M   GV PN V   + ++AC+               
Sbjct: 405 SWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACS--------------- 449

Query: 355 VKMGFTDDVL-VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
              G  D+     NS+   Y     LE    V D++                + G   +A
Sbjct: 450 -HAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLG---------------RVGRLEEA 493

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
           YE    M    + P    W+ L++    + N + A  + +++   D   +N  ++  L  
Sbjct: 494 YEFISDMH---IEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVD--PQNIGAYVLLSN 548

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
            Y   G+  +A  +   M+           +   PAC+++   NKV
Sbjct: 549 IYSAAGRWKDARKLRIAMRDKG--------MKKKPACSWIEIKNKV 586


>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 222/611 (36%), Positives = 333/611 (54%), Gaps = 37/611 (6%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            P    +  +I   + +    +AL L+  M   G+ P+ +T    I AC +      G+ 
Sbjct: 157 NPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLL 216

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H+  VK GF  D  + +SLI++Y+  ++L AA+++F++   +DV SWN+MI GY +   
Sbjct: 217 VHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVE 276

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK------- 462
            G A  +F +M   DV    I+WN +I+GY   G  DEA  LF  M + + V        
Sbjct: 277 MGHARMVFDRMVCRDV----ISWNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAG 332

Query: 463 -------------------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
                              R+  SWNS++A Y Q G+ N AL +F +M++    P   T+
Sbjct: 333 FVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATV 392

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
           +S+L ACA+L A +K   +H  +    +E +  V  +L+D YAK G I  +  +F+ M S
Sbjct: 393 VSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMES 452

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           KD++ WN++I G  +HG    A  LF +MK  G++PN  TF++I+ A S AGMVD G+K+
Sbjct: 453 KDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKL 512

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
              ++  Y I P +EHY  +IDL  R+G LEEAME I  MP+EP+ S   ALL  CRIHG
Sbjct: 513 LDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHG 572

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
           N +L  +  +RL +L+P       L+  IYA   K +DA KVR L + N      G   I
Sbjct: 573 NFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVI 632

Query: 744 EVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSG------LCIEEEEKEEISG 797
           E+K +V+ FV G WS   S+ +Y  L  +   + +   +S       L +EEE+KE    
Sbjct: 633 ELKGMVHRFVAGDWSHPESNKIYEKLNEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALA 692

Query: 798 IHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF 857
           +HSEKLA+A+ L+    +   IRIVKN+R+C  CH   K +S ++  EI + D    HHF
Sbjct: 693 VHSEKLAIAYGLL-HLDSKEAIRIVKNLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHF 751

Query: 858 KNGQCSCGDYW 868
           ++G+CSC D+W
Sbjct: 752 EDGECSCLDFW 762



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 208/429 (48%), Gaps = 36/429 (8%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A+ +F  ++      ++++I A S  +   E + L+  M+Q GL PD   +P +++AC  
Sbjct: 148 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 207

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
                 G L+H+ V+K G  C   + +S++ +Y     L  A++ F     +D V+WN+M
Sbjct: 208 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 267

Query: 230 ISGYFQIGENDEAHRLFDKM-CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
           I GY +  E   A  +FD+M CR+     V+++N +I  Y  +G+ D A  +   M    
Sbjct: 268 IDGYVKHVEMGHARMVFDRMVCRD-----VISWNTMINGYAIVGKIDEAKRLFDEMPERN 322

Query: 289 ITP---------------------------DVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           +                             DV +W  M++ +AQ G+ ++AL LF +M  
Sbjct: 323 LVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRA 382

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
           VGV P   T+ S +SAC  L AL  G+ +H+         + +VG +L++MY+KC ++  
Sbjct: 383 VGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISL 442

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
           A +VF+ ++ KDV +WN++IAG    G   +A +LF +M+E+ V PN IT+  ++S    
Sbjct: 443 ATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSH 502

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G  DE   L   M  +  ++     +  +I    + G    A+ +   M      PN  
Sbjct: 503 AGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMP---MEPNPS 559

Query: 502 TILSVLPAC 510
            + ++L  C
Sbjct: 560 ALGALLGGC 568



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 138/277 (49%), Gaps = 19/277 (6%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           +L+ + KCG ++DA  +F +M  R++ +W++M+  Y++  +  E + LF  M   G+ P 
Sbjct: 329 MLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPT 388

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           +     +L AC + G  + G  +H+ +    +     V  +++ +Y KCGK+  A + F 
Sbjct: 389 EATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFN 448

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
           +M+ KD +AWN++I+G    G   EA +LF +M    ++   +TF  ++ + +  G  D 
Sbjct: 449 AMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDE 508

Query: 277 AMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
             +++  M  S GI P V  + C+I   A+ G   +A++L      +G MP     ++  
Sbjct: 509 GQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMEL------IGTMPMEPNPSA-- 560

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
                L AL  G  IH       F    +VG  LIN+
Sbjct: 561 -----LGALLGGCRIHG-----NFELGEMVGKRLINL 587



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 102/441 (23%), Positives = 185/441 (41%), Gaps = 55/441 (12%)

Query: 1   FFIWILTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTY 60
           F  +  T F  L     +   P   ++ +  L  +    EA+ +  ++   G K    TY
Sbjct: 144 FLAYAKTIFHHL-----QNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTY 198

Query: 61  INLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
             +++AC +S+       +H   +    E D ++ + L+ +YA    L  A+++F     
Sbjct: 199 PFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSA 258

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           R++ +W+AMI  Y +         +F  MV      D   +  ++      G  +  K +
Sbjct: 259 RDVVSWNAMIDGYVKHVEMGHARMVFDRMVCR----DVISWNTMINGYAIVGKIDEAKRL 314

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
              + +  +       NS+LA +VKCG +  A   F  M  +D V+WNSM++ Y Q G+ 
Sbjct: 315 FDEMPERNLVS----WNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKP 370

Query: 240 DEAHRLFDKM------------------CRE-----------------EIKLGVVTFNIL 264
           +EA  LFD+M                  C                    I++  +    L
Sbjct: 371 NEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTAL 430

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
           +  Y + G+  +A ++   MES     DV  W  +I+G A +G   +A  LFKEM   GV
Sbjct: 431 VDMYAKCGKISLATQVFNAMES----KDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGV 486

Query: 325 MPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA- 382
            PN +T  + +SAC+    +  G + +  ++   G    V     +I++ ++   LE A 
Sbjct: 487 EPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAM 546

Query: 383 ERVFDMIKDKDVYSWNSMIAG 403
           E +  M  + +  +  +++ G
Sbjct: 547 ELIGTMPMEPNPSALGALLGG 567



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 8/211 (3%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-LVTEIDVFVK 94
           G+ NEA+ + D +   G K    T ++LL AC    ++     LH ++N    E++  V 
Sbjct: 368 GKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVG 427

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T L+ +YAKCG +  A +VF  M  +++  W+ +I   +     +E  +LF  M + G+ 
Sbjct: 428 TALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVE 487

Query: 155 PDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           P+D  F  IL AC + G  + G KL+  +    G+         V+ +  + G L  A  
Sbjct: 488 PNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAME 547

Query: 214 FFESMD-EKDGVAWNSM-----ISGYFQIGE 238
              +M  E +  A  ++     I G F++GE
Sbjct: 548 LIGTMPMEPNPSALGALLGGCRIHGNFELGE 578


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 222/647 (34%), Positives = 346/647 (53%), Gaps = 50/647 (7%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+ +Y + G+   A      M       DV  W  M+SG  +N R ++A+ LF  M   G
Sbjct: 110 LVHAYLRFGRVRDAYRAFDEMRHR----DVPAWNAMLSGLCRNARAAEAVGLFGRMVMEG 165

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V  + VT++S +  C  L   A+ + +H  AVK G  D++ V N++I++Y K   LE   
Sbjct: 166 VAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVR 225

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
           +VFD +  +D+ +WNS+I+G+ Q G    A E+F  M++S V P+V+T   L S   Q G
Sbjct: 226 KVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCG 285

Query: 444 N-----------------------EDEAVDLFQRMGKNDKVKR--------NTASWNSLI 472
           +                        +  VD++ ++ K +  +R        +  SWN+LI
Sbjct: 286 DICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLI 345

Query: 473 AGYQQLGQKNNALGVFRKMQS-SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
            GY Q G  + A+ V+  MQ      P   T +SVLPA ++L A  +   +H   ++  L
Sbjct: 346 TGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGL 405

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
              + V   +ID YAK G +  +  +F+    +    WN++I G  +HG    AL LF Q
Sbjct: 406 NLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQ 465

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           M+  G+ P+  TF+S++ A S AG+VD G+  F  +   Y I P+ +HY+ M+D++GR+G
Sbjct: 466 MQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAG 525

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
           +L++A +FI +MPI+PDS+IW ALL ACRIHGN+++  +A + LF+L+P +V    L+  
Sbjct: 526 QLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSN 585

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN 771
           +YA  GK +   +VR L R    + + G   IEVK  V  F +G     +    +  +Q 
Sbjct: 586 MYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQ--HEEIQR 643

Query: 772 VPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRI 821
              ++ A+    G           +EE+EKE+I   HSE+LA+AF +I +   P T + I
Sbjct: 644 ELLDLLAKIRSLGYVPDYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTP--PRTPLHI 701

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            KN+R+C  CH   KY+S +   EI + DS   HHFK+G CSCGD+W
Sbjct: 702 YKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYCSCGDFW 748



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 135/491 (27%), Positives = 221/491 (45%), Gaps = 49/491 (9%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNL-VTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           T+  LL+A     +   A +LHA  L L +   D F    L+  Y + G + DA   F++
Sbjct: 73  TFPPLLRAAQGPGT---AAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDE 129

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           MR R++  W+AM+    R+ R  E V LF  MV +G+  D      +L  C   GD    
Sbjct: 130 MRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALA 189

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
             MH   +K G+     V N+++ VY K G L   R+ F+ M  +D V WNS+ISG+ Q 
Sbjct: 190 LAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQG 249

Query: 237 GENDEAHRLFDKMCREEIKLGVVTF----------------------------------- 261
           G+   A  +F  M    +   V+T                                    
Sbjct: 250 GQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIA 309

Query: 262 -NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
            N ++  Y +L + + A  M   M       D  +W  +I+G+ QNG  S+A+ ++  M 
Sbjct: 310 GNAIVDMYAKLSKIEAAQRMFDSMP----VRDAVSWNTLITGYMQNGLASEAIHVYDHMQ 365

Query: 321 -FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
              G+ P   T  S + A + L AL  G  +H+L++K G   DV VG  +I++Y+KC +L
Sbjct: 366 KHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKL 425

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
           + A  +F+    +    WN++I+G    G+  KA  LF +MQ+  + P+ +T+  L++  
Sbjct: 426 DEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAAC 485

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
              G  D+  + F  M     +K     +  ++  + + GQ ++A    R M      P+
Sbjct: 486 SHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMP---IKPD 542

Query: 500 CVTILSVLPAC 510
                ++L AC
Sbjct: 543 SAIWGALLGAC 553



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 206/428 (48%), Gaps = 23/428 (5%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACI--DSNSIHLARKLHAFLNLV 86
           L  LC N R  EA+ +   +  +G      T  ++L  C+     ++ LA  L+A  + +
Sbjct: 142 LSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGL 201

Query: 87  TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
            + ++FV   ++ VY K G L++ R+VF+ M  R+L TW+++I  + +  +    VE+F 
Sbjct: 202 DD-ELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFC 260

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR-NSVLAVYVKC 205
            M   G+ PD      +  A   CGD   G+ +H  +++ G      +  N+++ +Y K 
Sbjct: 261 GMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKL 320

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-IKLGVVTFNIL 264
            K+  A+R F+SM  +D V+WN++I+GY Q G   EA  ++D M + E +K    TF  +
Sbjct: 321 SKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSV 380

Query: 265 IRSYNQLGQCDVAMEMVKRMESL----GITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
           + +Y+ LG    A++   RM +L    G+  DV+  TC+I  +A+ G+  +A+ LF++  
Sbjct: 381 LPAYSHLG----ALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTP 436

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
                P    I+         KAL++  ++     + G + D +   SL+   S    ++
Sbjct: 437 RRSTGPWNAVISGVGVHGHGAKALSLFSQMQ----QEGISPDHVTFVSLLAACSHAGLVD 492

Query: 381 AAERVFDMIKDKDVYSWNSMIAGY-CQAGYCGKAYEL---FIKMQESDVPPNVITWNVLI 436
                F+M+  +  Y    +   Y C     G+A +L   F  ++   + P+   W  L+
Sbjct: 493 QGRNFFNMM--QTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALL 550

Query: 437 SGYIQNGN 444
                +GN
Sbjct: 551 GACRIHGN 558



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 177/397 (44%), Gaps = 26/397 (6%)

Query: 35  NGRLNEAITVLDSIAT-QGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVF 92
           NG  +EAI V D +   +G K  + T++++L A     ++    ++HA  +     +DV+
Sbjct: 351 NGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVY 410

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V T ++ +YAKCG LD+A  +FE    R+   W+A+I          + + LF  M Q+G
Sbjct: 411 VGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEG 470

Query: 153 LFPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           + PD   F  +L AC + G  + G+   + +    G+  + +    ++ ++ + G+L  A
Sbjct: 471 ISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDA 530

Query: 212 RRFFESMDEK-DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
             F  +M  K D   W +++ G  +I  N E  ++  +   E     V  + ++   Y +
Sbjct: 531 FDFIRNMPIKPDSAIWGALL-GACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAK 589

Query: 271 LGQCDVAMEM--VKRMESLGITP-----------DVFTWTCMISGFAQNGRTS-QALDLF 316
           +G+ D   E+  + R ++L  TP           +VF     ++   Q+     + LDL 
Sbjct: 590 VGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLL 649

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK- 375
            ++  +G +P+   +   +    D K   +      LA+  G  +      + +++Y   
Sbjct: 650 AKIRSLGYVPDYSFVLQDVE--EDEKEQILNNHSERLAIAFGIINT--PPRTPLHIYKNL 705

Query: 376 --CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
             C +   A +    I ++++   +S    + + GYC
Sbjct: 706 RVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGYC 742



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 11/174 (6%)

Query: 521 EIHGCVLRRSL-ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
           ++H C LR  L         +L+  Y + G +  +   FD M  +D+  WN+++ G   +
Sbjct: 89  QLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRN 148

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
                A+ LF +M   G+  +  T  S+     L   V LG +        Y +   ++ 
Sbjct: 149 ARAAEAVGLFGRMVMEGVAGDAVTVSSV-----LPMCVLLGDRALALAMHLYAVKHGLDD 203

Query: 640 Y----SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
                +AMID+YG+ G LEE  +  + M    D   W ++++     G +  AV
Sbjct: 204 ELFVCNAMIDVYGKLGMLEEVRKVFDGMSSR-DLVTWNSIISGHEQGGQVASAV 256


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 235/782 (30%), Positives = 387/782 (49%), Gaps = 80/782 (10%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           +  +L+AC         K +H   +K   +    V + +  +Y+ C +++ ARR F+ + 
Sbjct: 11  YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
               + WN +I  Y   G  D A  L+  M    ++    T+  ++++ + L   +  +E
Sbjct: 71  NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130

Query: 280 MVKRMESLGITPDVFT-------------------------------WTCMISGFAQNGR 308
           +    +  G+  DVF                                W  MI+G +  G 
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
              A+ L  +M   G+ PN  TI   +    + KAL  G  +H   V+  F + V+VG  
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG 250

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD-VPP 427
           L++MY+KC+ L  A ++FD++  ++  SW++MI GY  +    +A ELF +M   D + P
Sbjct: 251 LLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDP 310

Query: 428 NVITW-----------------------------------NVLISGYIQNGNEDEAVDLF 452
             +T                                    N L+S Y + G  D+A+  F
Sbjct: 311 TPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFF 370

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
             M   D V     S++++++G  Q G    AL +FR MQ S   P+  T+L VLPAC++
Sbjct: 371 DEMNPKDSV-----SFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSH 425

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 572
           L A       HG ++ R   +   + N+LID Y+K G I ++R +F+ M   DI++WN++
Sbjct: 426 LAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAM 485

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQ 632
           I GY +HG    AL LF  + + GLKP+  TF+ ++ + S +G+V  G+  F +++  + 
Sbjct: 486 IIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFS 545

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAI 692
           I+P +EH   M+D+ GR+G ++EA  FI +MP EPD  IW ALL+ACRIH NI+L     
Sbjct: 546 IVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVS 605

Query: 693 ERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTF 752
           +++  L P       L+  IY+  G+ +DA  +R  +++   +   G  WIE+  +V+ F
Sbjct: 606 KKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAF 665

Query: 753 VTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLALA 806
           V G  S      +   L+ +   +  R  +   C      +EEEEKE+I   HSEKLA+A
Sbjct: 666 VGGDQSHLQLSQINRKLEELLVEMK-RLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIA 724

Query: 807 FALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGD 866
           F ++ + +A   I + KN+R+C  CH   K+++++   EI + D+   HHFKNG C+CGD
Sbjct: 725 FGIL-NLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGD 783

Query: 867 YW 868
           +W
Sbjct: 784 FW 785



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 171/639 (26%), Positives = 293/639 (45%), Gaps = 90/639 (14%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           +N Y++LL+ACI S S+  A+K+H  FL   +  D  V  KL  +Y  C  +  AR +F+
Sbjct: 8   KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFD 67

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
           ++   ++  W+ +I AY+ +  +   ++L+  M+  G+ P+ + +P +L+AC      E 
Sbjct: 68  EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +HS     G+     V  +++  Y KCG L+ A+R F SM  +D VAWN+MI+G   
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSL 187

Query: 236 IGENDEAHRLFDKM-----------------------------------CREEIKLGVVT 260
            G  D+A +L  +M                                    R     GVV 
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVV 247

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
              L+  Y    +C   +   K  + +G+  +V +W+ MI G+  +    +AL+LF +M 
Sbjct: 248 GTGLLDMY---AKCQCLLYARKIFDVMGVRNEV-SWSAMIGGYVASDCMKEALELFDQMI 303

Query: 321 FVGVM-PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
               M P  VT+ S + AC  L  L+ G ++H   +K+G   D+L+GN+L++MY+KC  +
Sbjct: 304 LKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVI 363

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------- 432
           + A R FD +  KD  S++++++G  Q G    A  +F  MQ S + P++ T        
Sbjct: 364 DDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPAC 423

Query: 433 ----------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                                       N LI  Y + G    A ++F RM ++D V   
Sbjct: 424 SHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIV--- 480

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             SWN++I GY   G    ALG+F  + +    P+ +T + +L +C++   S  V E   
Sbjct: 481 --SWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSH---SGLVMEGRL 535

Query: 525 CVLRRSLESSL-PVMNS---LIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
                S + S+ P M     ++D   ++G I  +      M    D+  W++L+    +H
Sbjct: 536 WFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIH 595

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
                  ++  +++S G   + G F+ +   +S AG  D
Sbjct: 596 KNIELGEEVSKKIQSLG-PESTGNFVLLSNIYSAAGRWD 633



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 231/513 (45%), Gaps = 44/513 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFV 93
           NG  + AI +  S+   G +  + TY  +L+AC    +I    ++H+   +   E DVFV
Sbjct: 87  NGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFV 146

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+  YAKCG L +A+ +F  M  R++  W+AMI   S      + V+L   M ++G+
Sbjct: 147 CTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGI 206

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+      +L   G       GK +H   ++        V   +L +Y KC  L++AR+
Sbjct: 207 CPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARK 266

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-------------------- 253
            F+ M  ++ V+W++MI GY       EA  LFD+M  ++                    
Sbjct: 267 IFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLT 326

Query: 254 ------------IKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                       IKLG    ++  N L+  Y + G  D A+     M       D  +++
Sbjct: 327 DLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNP----KDSVSFS 382

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            ++SG  QNG  + AL +F+ M   G+ P+  T+   + AC+ L AL  G   H   +  
Sbjct: 383 AIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVR 442

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           GF  D L+ N+LI+MYSKC ++  A  VF+ +   D+ SWN+MI GY   G   +A  LF
Sbjct: 443 GFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLF 502

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
             +    + P+ IT+  L+S    +G   E    F  M ++  +         ++    +
Sbjct: 503 HDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGR 562

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            G  + A    R M    F P+     ++L AC
Sbjct: 563 AGLIDEAHHFIRNMP---FEPDVRIWSALLSAC 592



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 167/364 (45%), Gaps = 21/364 (5%)

Query: 38  LNEAITVLDSIATQGA-KVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKT 95
           + EA+ + D +  + A      T  ++L+AC     +   RKLH ++  L + +D+ +  
Sbjct: 292 MKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGN 351

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            LLS+YAKCG +DDA   F++M  ++  ++SA++    ++      + +F +M   G+ P
Sbjct: 352 TLLSMYAKCGVIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDP 411

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D      +L AC +    + G   H  +I  G +    + N+++ +Y KCGK+ +AR  F
Sbjct: 412 DLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVF 471

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
             MD  D V+WN+MI GY   G   EA  LF  +    +K   +TF  L+ S +  G   
Sbjct: 472 NRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSG--- 528

Query: 276 VAMEMVKRM------ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
             + M  R+          I P +    CM+    + G   +A    + M F    P+  
Sbjct: 529 --LVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPF---EPDVR 583

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFD 387
             ++ +SAC   K + +G E+      +G       GN ++  N+YS     + A  +  
Sbjct: 584 IWSALLSACRIHKNIELGEEVSKKIQSLGPES---TGNFVLLSNIYSAAGRWDDAAHIRI 640

Query: 388 MIKD 391
             KD
Sbjct: 641 TQKD 644


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 266/887 (29%), Positives = 431/887 (48%), Gaps = 86/887 (9%)

Query: 60  YINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           Y +LL    DS S+ L +++HA +     +   F+   L+ +Y  CG L DA+  F+ M 
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGK 177
            ++  TW+ +I A+ +     + + LF  M  +G+ P +  F  +L AC    +  E G+
Sbjct: 61  VQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEGR 120

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H ++    M     V  ++L +Y KC  +  AR+ F+ +  K  V WN+MI+ Y Q  
Sbjct: 121 RIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKRVVEWNAMITAYAQQD 180

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILI---------------------RSYNQLGQCDV 276
            +++A ++F  M  E +K   +TF  ++                     R ++ L     
Sbjct: 181 HHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHDSSF 240

Query: 277 AMEMVKRMESLGITPDVFTW-----------TCMISGFAQNGRTSQALDLFKEMSFVGVM 325
           A  +V    S G     F             T MI+ + Q  R  +AL+LFK M   GV 
Sbjct: 241 ATALVNFYGSCGDLEQAFRAFSRHRLELILATAMITQYTQRERWDEALELFKVMLLEGVK 300

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
            + +   + ++AC+  + L  G  IH    ++ F   V  GN+LINMY KC  LE A  V
Sbjct: 301 LDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGKCGSLEEAVEV 360

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ------------------------ 421
           F  ++ +DV SWN++IA + Q     +A  L   MQ                        
Sbjct: 361 FRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNALPLCATSEAL 420

Query: 422 -----------ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
                      ES +  +V+  N ++  Y    + D+A  +F+ M   D+V     SWN+
Sbjct: 421 AKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQV-----SWNA 475

Query: 471 LIAGYQ-QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           +I  Y  Q    + AL +F++MQ   F P+ ++ ++ L ACA   +  + K +H  +   
Sbjct: 476 MITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGKLLHDRIRET 535

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            LES++ V N++++ YAKSG +V +R +F  M   D+I+WN +I  +  HG     L  F
Sbjct: 536 GLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHGHADQVLRFF 595

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII-PMIEHYSAMIDLYG 648
            +M   G  PN  TF+S++ A S  G+V  G ++F S+   +  I P  EHY  M+DL  
Sbjct: 596 RRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEHYYCMVDLIA 655

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+GKL+ A +FI   P++PD  I   +L A ++H +++ A  + E L +L P       +
Sbjct: 656 RAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELTPDRSAAYVV 715

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  +Y   GK ++  K+R+L  E   R       I VK  V+ F TG  + + +  +   
Sbjct: 716 LSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTNARTPEILEE 775

Query: 769 LQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRI 821
           L+ +   + A++ ++         + +E+K+ +   HSEKLA+AF LI  S AP T +RI
Sbjct: 776 LERLSLEM-AKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLI--STAPGTSLRI 832

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +KN+R+C  CH   K++S +   EI + DS   HHF NG CSCGDYW
Sbjct: 833 IKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879


>gi|347954458|gb|AEP33729.1| chlororespiratory reduction 21, partial [Brassica rapa]
          Length = 788

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 227/756 (30%), Positives = 390/756 (51%), Gaps = 48/756 (6%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV 91
           LC NG + EA++++  +  +  ++    Y  +LQ C+     H  +++HA   ++   D 
Sbjct: 1   LCKNGEIKEALSLVTEMDFRNVRIGPEIYGEILQGCVYERDFHTGQQIHA--RILKNGDF 58

Query: 92  FVK-----TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
           + K     TKL+  YAKC  L+ A  +F  +R RN+++W+A+IG   R       +  F 
Sbjct: 59  YAKNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRMGLVEGALMGFV 118

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M++D +FPD+F+ P + +ACG       G+ +H  V K G+     V +S+  +Y KCG
Sbjct: 119 EMLKDEIFPDNFVVPNVCKACGALQWRGFGRGVHGYVAKSGLDDCVFVASSLADMYGKCG 178

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----- 261
            L  AR+ F+ + E++ VAWN+++ GY Q G N+EA RL   M  E ++   VT      
Sbjct: 179 VLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVEPTRVTVSTCLS 238

Query: 262 --------------------------NILIRS----YNQLGQCDVAMEMVKRMESLGITP 291
                                     NIL  S    Y ++G  + A  +  RM    +  
Sbjct: 239 ASANMGGVEEGKQSHALAVVNGLELDNILGTSVLNFYCKVGLVEYAEMVFDRM----VGK 294

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           DV TW  +ISG+ Q G    A+ + K M    +  + VT+++ +S     +   +G E+ 
Sbjct: 295 DVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSTAARTQNSKLGKEVQ 354

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
              ++  F  D+++ ++ ++MY+KC  +  A++VFD    KD+  WN+++A Y ++G  G
Sbjct: 355 CYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLAAYAESGLSG 414

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
           +A  LF +MQ   VPPNVITWN++I   ++NG  DEA  +F +M ++  +     SW ++
Sbjct: 415 EALRLFYEMQLESVPPNVITWNLIILSLLRNGQVDEAKKMFLQM-QSSGIVPTIVSWTTM 473

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           + G  Q G    A+   RKMQ     PN  +I   L ACA L + +  + +HG ++R  L
Sbjct: 474 MNGLVQNGCSEEAIHYLRKMQEYGMRPNVFSITVALSACANLASLHFGRSVHGYIIRNRL 533

Query: 532 ESS-LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
            SS + +  SL+D YAK G+I  +  +F      ++  +N++I  Y L+G    A+ L+ 
Sbjct: 534 HSSSVSIETSLVDMYAKCGDISKAEKVFRRKLFSELPLYNAMISAYALYGNVEEAMALYR 593

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
            +   G+KP+  TF +I+ A + AG ++   ++F  +   + + P +EHY  M+DL   +
Sbjct: 594 SLDDMGIKPDNITFTNILSACNHAGDINQAIEIFSDMVSKHGVKPCLEHYGLMVDLLASA 653

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           G+ E+A+  +E+MP EPD+ + ++LL  C      +L     ++L + EP +      I 
Sbjct: 654 GETEKALRLMEEMPYEPDARMIQSLLATCNKEHKTELVEYLSKQLLESEPDNSGNYVTIS 713

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
             YA+ G  ++ +K+R++ +    +   G  WI VK
Sbjct: 714 NAYAVEGSWDEVVKMREMMKAKGLKKQPGCSWIRVK 749



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 4/209 (1%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--N 84
           T ++ L  NG   EAI  L  +   G +    +    L AC +  S+H  R +H ++  N
Sbjct: 472 TMMNGLVQNGCSEEAIHYLRKMQEYGMRPNVFSITVALSACANLASLHFGRSVHGYIIRN 531

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
            +    V ++T L+ +YAKCG +  A +VF       L  ++AMI AY+      E + L
Sbjct: 532 RLHSSSVSIETSLVDMYAKCGDISKAEKVFRRKLFSELPLYNAMISAYALYGNVEEAMAL 591

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           +  +   G+ PD+  F  IL AC + GD  +A ++   +V K G+         ++ +  
Sbjct: 592 YRSLDDMGIKPDNITFTNILSACNHAGDINQAIEIFSDMVSKHGVKPCLEHYGLMVDLLA 651

Query: 204 KCGKLIWARRFFESMD-EKDGVAWNSMIS 231
             G+   A R  E M  E D     S+++
Sbjct: 652 SAGETEKALRLMEEMPYEPDARMIQSLLA 680


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 247/768 (32%), Positives = 408/768 (53%), Gaps = 74/768 (9%)

Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD 172
           +F      N++ +++M+  YS  Q   +VV +F  M   G+ PD F++P ++++ GN   
Sbjct: 56  LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGN--- 112

Query: 173 FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD--EKDGVAWNSMI 230
              G   H+ V+KLG      VRN+V+ +Y + G +  AR+ F+ +   E+    WN+M+
Sbjct: 113 --GGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT 290
           SGY++     +A  LFD M        V+T+  ++  Y ++      +E  +R       
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERN----VITWTAMVTGYAKVKD----LEAARRYFDCMPE 222

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK----ALAM 346
             V +W  M+SG+AQNG   + L LF EM   G+ P+  T  + ISAC+       A ++
Sbjct: 223 RSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASL 282

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
              +H   +++    +  V  +L++MY+KC  + AA R+FD +                 
Sbjct: 283 VRTLHQKQIQL----NCFVRTALLDMYAKCGSIGAARRIFDELG---------------- 322

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                 AY             N +TWN +IS Y + GN D A +LF  M       RN  
Sbjct: 323 ------AYR------------NSVTWNAMISAYTRVGNLDSARELFNTMPG-----RNVV 359

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKM-QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
           +WNS+IAGY Q GQ   A+ +F++M  +    P+ VT++SV+ AC +L A      +   
Sbjct: 360 TWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRF 419

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
           +    ++ S+   N++I  Y++ G++  ++ +F  M+++D++++N+LI G+  HG    A
Sbjct: 420 LTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEA 479

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           ++L   MK  G++P+R TF+ ++ A S AG+++ G+KVF SI +     P I+HY+ M+D
Sbjct: 480 INLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMVD 534

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           L GR G+LE+A   +E MP+EP + ++ +LL A RIH  ++L  LA  +LF+LEP +   
Sbjct: 535 LLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSGN 594

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
             L+  IYA  G+ +D  ++R+  ++   + + G  W+E    ++ F+    S   SD +
Sbjct: 595 FILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFIVADRSHERSDDI 654

Query: 766 YSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIR 820
           Y  L  + + +      A  S     +EEEEKEEI G HSEKLA+ +AL+  S+A   IR
Sbjct: 655 YQLLIELRKKMREAGYIADKSCVLRDVEEEEKEEIVGTHSEKLAICYALL-VSEAGAVIR 713

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +VKN+R+C  CH   K +S +    I + D+   H F +G CSC DYW
Sbjct: 714 VVKNLRVCWDCHTAIKMISKLEGRVIIVRDNNRFHCFNDGLCSCKDYW 761



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 202/403 (50%), Gaps = 61/403 (15%)

Query: 82  FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
             +++ E +V   T +++ YAK   L+ AR  F+ M ER++ +W+AM+  Y+++    EV
Sbjct: 185 LFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEV 244

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIK-LGMSCVRRVRNSVL 199
           + LF  MV  G+ PD+  +  ++ AC + GD   A  L+ +L  K + ++C   VR ++L
Sbjct: 245 LRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQIQLNCF--VRTALL 302

Query: 200 AVYVKCGKLIWARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV 258
            +Y KCG +  ARR F+ +   ++ V WN+MIS Y ++G  D A  LF+ M        V
Sbjct: 303 DMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSARELFNTMPGRN----V 358

Query: 259 VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
           VT+N +I  Y Q GQ  +A+E+ K M    IT    T                       
Sbjct: 359 VTWNSMIAGYAQNGQSAMAIELFKEM----ITAKKLT----------------------- 391

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
                  P+ VT+ S ISAC  L AL +G  +     +      +   N++I MYS+C  
Sbjct: 392 -------PDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGS 444

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-NVLI- 436
           +E A+RVF  +  +DV S+N++I+G+   G+  +A  L   M+E  + P+ +T+  VL  
Sbjct: 445 MEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTA 504

Query: 437 ---SGYIQNGN------EDEA-------VDLFQRMGKNDKVKR 463
              +G ++ G       +D A       VDL  R+G+ +  KR
Sbjct: 505 CSHAGLLEEGRKVFESIKDPAIDHYACMVDLLGRVGELEDAKR 547


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 260/823 (31%), Positives = 405/823 (49%), Gaps = 118/823 (14%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM--SCVRRVRNSVLAVYVKCGKLIWARR 213
           D F  P  +++     D  + + +H   ++  +       V N++L  Y +CG L  A  
Sbjct: 47  DHFALPPAIKSAAALRDSRSTRAIHGASLRRALLHRPTPAVSNALLTAYARCGDLDAALA 106

Query: 214 FFESM--DEKDGVAWNSMISG---YFQIGEN----------------------------- 239
            F +   D +D V++NS+IS    + + G                               
Sbjct: 107 LFAATPPDLRDAVSYNSLISALCLFRRWGHALDALRDMLADHEVSSFTLVSVLLACSHLA 166

Query: 240 DEAHRLFDKMCREEIKLGVV-------TFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
           D+ HRL  +     +K G +        FN L+  Y +LG  D A  +     S     D
Sbjct: 167 DQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLF--FSSGAGVGD 224

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           + TW  MIS   Q GR  +A+ +  +M  +GV P+GVT  SA+ AC+ L+ L +G E+H+
Sbjct: 225 LVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHA 284

Query: 353 LAVKMGFTDDVLVGNS-----LINMYSKCEELEAAERVFDMIKD--KDVYSWNSMIAGYC 405
             +K    DD L  NS     L++MY+  E++  A RVFDM+ +  + +  WN+MI GY 
Sbjct: 285 FVLK----DDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYA 340

Query: 406 Q-AGYCGKAYELFIKMQ-ESDVPPN---------------VITWNVLISGYIQNGN---- 444
           Q  G   +A ELF +M+ E+   P+               V T    + GY+   +    
Sbjct: 341 QHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASN 400

Query: 445 ---EDEAVDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQ- 492
              ++  +D++ R+G+ D+          R+  SWN+LI G    G  + A  + R+MQ 
Sbjct: 401 RFVQNALMDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQL 460

Query: 493 --------------------SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
                                 C  PN +T++++LP CA L A  + KEIHG  +R +LE
Sbjct: 461 PSSAASGETMLEGDDTSVDGQRCM-PNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALE 519

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
           S L V ++L+D YAK G +  +R +FD +  +++ITWN LI  Y +HG    AL LFD+M
Sbjct: 520 SDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRM 579

Query: 593 KSFG-LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
            + G   PN  TF++ + A S +G+VD G ++F  +   Y   P    ++ ++D+ GR+G
Sbjct: 580 VANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAG 639

Query: 652 KLEEAMEFIEDM-PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           +L+EA   I  M P E   S W  +L ACR+H N+ L  +A ERLF+LEP +     L+ 
Sbjct: 640 RLDEAYGIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLC 699

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS--- 767
            IY+  G  E++ +VR + R+       G  WIE+   ++ F+ G  +   S  +++   
Sbjct: 700 NIYSAAGLWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMD 759

Query: 768 --WLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNI 825
             W +   E     +S     ++E EK  +   HSEKLA+AF L+ +     TIR+ KN+
Sbjct: 760 ALWERMRREGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGA-TIRVAKNL 818

Query: 826 RMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           R+C  CHE AK++S M   EI L D +  HHF++G CSCGDYW
Sbjct: 819 RVCNDCHEAAKFISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 217/502 (43%), Gaps = 73/502 (14%)

Query: 59  TYINLLQAC--IDSNSIHLARKLHAFLNLVTEIDV----FVKTKLLSVYAKCGCLDDARE 112
           T +++L AC  +      L R+ HAF      +D     F    LLS+YA+ G +DDA+ 
Sbjct: 154 TLVSVLLACSHLADQGHRLGREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQR 213

Query: 113 VF--EDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
           +F        +L TW+ MI    +  R  E V++ + MV  G+ PD   F   L AC   
Sbjct: 214 LFFSSGAGVGDLVTWNTMISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRL 273

Query: 171 GDFEAGKLMHSLVIK-LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE--KDGVAWN 227
                G+ +H+ V+K   ++    V ++++ +Y    ++  ARR F+ + E  +    WN
Sbjct: 274 ELLGVGREVHAFVLKDDDLAANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWN 333

Query: 228 SMISGYFQIGEND-EAHRLFDKM--------------------CREEIKLGVVTF----- 261
           +MI GY Q G  D EA  LF +M                     R E+  G         
Sbjct: 334 AMICGYAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVV 393

Query: 262 -----------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTS 310
                      N L+  Y +LG+ D A  +   ++      D+ +W  +I+G    G  S
Sbjct: 394 KRDMASNRFVQNALMDMYARLGRMDEAHTIFAMID----LRDIVSWNTLITGCIVQGLIS 449

Query: 311 QALDLFKEMSFVG--------------------VMPNGVTITSAISACTDLKALAMGMEI 350
           +A  L +EM                         MPN +T+ + +  C  L A A G EI
Sbjct: 450 EAFQLVREMQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEI 509

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H  AV+     D+ VG++L++MY+KC  L  A  VFD +  ++V +WN +I  Y   G  
Sbjct: 510 HGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLG 569

Query: 411 GKAYELFIKM-QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
            +A  LF +M    +  PN +T+   ++    +G  D  ++LFQ M ++   +       
Sbjct: 570 DEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHA 629

Query: 470 SLIAGYQQLGQKNNALGVFRKM 491
            ++    + G+ + A G+   M
Sbjct: 630 CVVDVLGRAGRLDEAYGIISSM 651



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 7/192 (3%)

Query: 46  DSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYA 102
           D  +  G +   N  T + LL  C    +    +++H + +    E D+ V + L+ +YA
Sbjct: 474 DDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYA 533

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFP 161
           KCGCL  AR VF+ +  RN+ TW+ +I AY       E + LF  MV +G   P++  F 
Sbjct: 534 KCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFI 593

Query: 162 KILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM-- 218
             L AC + G  + G +L   +    G      +   V+ V  + G+L  A     SM  
Sbjct: 594 AALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSMAP 653

Query: 219 DEKDGVAWNSMI 230
            E    AW++M+
Sbjct: 654 GEHQVSAWSTML 665


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 267/923 (28%), Positives = 451/923 (48%), Gaps = 104/923 (11%)

Query: 39   NEAITVLDSIATQGAKVRRNTYINLLQAC--IDSNSIHLARKLHAFL-NLVTEIDVFVKT 95
            +EA ++   + + G         + L+AC    S  I L  ++HAF+  L    D+ +  
Sbjct: 223  DEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSN 282

Query: 96   KLLSVYAKC-GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG-- 152
             L+S+Y+ C G +DDA  VF++++ RN  TW+++I  Y R        +LF +M  +G  
Sbjct: 283  VLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVE 342

Query: 153  --LFPDDFLFPKILQAC---GNCGDFEAGKLMHSLVIKLGMSCVRR---VRNSVLAVYVK 204
              L P+++    ++ A     +CG      L+  ++ ++  S   R   V ++++  + +
Sbjct: 343  LNLRPNEYTLCSLVTAACSLADCGLV----LLEQMLTRIEKSGFLRDLYVGSALVNGFAR 398

Query: 205  CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--------------- 249
             G +  A+  F+ M +++ V  N ++ G  +  + +EA ++F +M               
Sbjct: 399  YGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLL 458

Query: 250  --------CREEIKLGVVTFNILIRS-------------YNQLGQCDVAMEMVKRMESLG 288
                     +E  + G      L RS              N  G+C  A++    +  L 
Sbjct: 459  STFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKC-TAIDNACSVFQLM 517

Query: 289  ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
             + D  +W  MISG   N R  +A+  F  M   G++P+  ++ S +S+C+ L  L +G 
Sbjct: 518  PSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGR 577

Query: 349  EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ-A 407
            +IH    K G   DV V N+L+ +Y++ + +   ++VF  + + D  SWNS I    +  
Sbjct: 578  QIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYE 637

Query: 408  GYCGKAYELFIKMQESDVPPNVITW----------------------------------- 432
                +A + F++M ++   PN +T+                                   
Sbjct: 638  ASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIE 697

Query: 433  NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
            N L++ Y +    ++   +F RM +    +R+  SWNS+I+GY   G  + A+ +   M 
Sbjct: 698  NALLAFYGKCEQMEDCEIIFSRMSE----RRDEVSWNSMISGYLHSGILHKAMDLVWPMM 753

Query: 493  SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
                  +  T  +VL ACA +    +  E+H C +R  LES + V ++L+D YAK G I 
Sbjct: 754  QRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKID 813

Query: 553  YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            Y+   F+ M  ++I +WNS+I GY  HG    AL +F +MK  G  P+  TF+ ++ A S
Sbjct: 814  YASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACS 873

Query: 613  LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
              G+VD G K F S+ E Y + P IEH+S M+DL GR+G +++  +FI+ MP++P+  IW
Sbjct: 874  HVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIW 933

Query: 673  EALLTA-CRIHG-NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLER 730
              +L A CR +G N +L   A + L +LEP + +   L+  ++A  G  ED ++ R   R
Sbjct: 934  RTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMR 993

Query: 731  ENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGL 785
            +   +   G  W+ +K+ V+ FV G  +    + +Y  L+ +   +        + ++  
Sbjct: 994  KAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYVPETKYALY 1053

Query: 786  CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCE 845
             +E E KEE+   HSEKLA+AF L   S+ P  IRI+KN+R+C  CH   KY+S +   +
Sbjct: 1054 DLELENKEELLSYHSEKLAIAFVLTRKSELP--IRIMKNLRVCGDCHTAFKYISKIVGRQ 1111

Query: 846  IFLADSKCLHHFKNGQCSCGDYW 868
            I L DS   HHF  G CSCGDYW
Sbjct: 1112 IILRDSNRFHHFGGGMCSCGDYW 1134



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 186/710 (26%), Positives = 327/710 (46%), Gaps = 97/710 (13%)

Query: 69  DSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAM 128
           D+N +HL      F +     DVF    L+++Y + G L  AR++F++M ++NL +WS +
Sbjct: 158 DANHLHLQLYKTGFTD-----DVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCL 212

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD--FEAGKLMHSLVIKL 186
           I  Y++++   E   LF  ++  GL P+ F     L+AC  CG    + G  +H+ + KL
Sbjct: 213 ISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKL 272

Query: 187 GMSCVRRVRNSVLAVYVKC-GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRL 245
                  + N ++++Y  C G +  A R F+ +  ++ V WNS+IS Y + G+   A +L
Sbjct: 273 PCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKL 332

Query: 246 FDKMCREEIKLGV----VTFNILIRSYNQLGQCDVAM--EMVKRMESLGITPDVFTWTCM 299
           F  M  E ++L +     T   L+ +   L  C + +  +M+ R+E  G   D++  + +
Sbjct: 333 FSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSAL 392

Query: 300 ISGFAQNG-------------------------------RTSQALDLFKEMSFVGVMPNG 328
           ++GFA+ G                               +  +A  +FKEM  + V  N 
Sbjct: 393 VNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINS 451

Query: 329 VTITSAISACTDLKALA----MGMEIHSLAVKMGFTD-DVLVGNSLINMYSKCEELEAAE 383
            ++   +S  T+   L      G E+H+   + G  D  + +GN+L+NMY KC  ++ A 
Sbjct: 452 ESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNAC 511

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP---------------- 427
            VF ++  KD  SWNSMI+G        +A   F  M+ + + P                
Sbjct: 512 SVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLG 571

Query: 428 -------------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                              +V   N L++ Y +  + +E   +F +M + D+V     SW
Sbjct: 572 WLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQV-----SW 626

Query: 469 NSLIAGYQQL-GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           NS I    +       AL  F +M  + + PN VT +++L A +         +IH  +L
Sbjct: 627 NSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALIL 686

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS-KDIITWNSLICGYVLHGFWHAAL 586
           + S+     + N+L+  Y K   +     IF  MS  +D ++WNS+I GY+  G  H A+
Sbjct: 687 KYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAM 746

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF-CSITECYQIIPMIEHYSAMID 645
           DL   M   G K +  TF +++ A +    ++ G +V  C++  C +   ++   SA++D
Sbjct: 747 DLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVG--SALVD 804

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
           +Y + GK++ A  F E MP+    S W ++++    HG+   A+    R+
Sbjct: 805 MYAKCGKIDYASRFFELMPVRNIYS-WNSMISGYARHGHGQKALKIFTRM 853



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 114/479 (23%), Positives = 213/479 (44%), Gaps = 41/479 (8%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
            N R  EA++   ++   G      + I+ L +C     + L R++H        ++DV V
Sbjct: 535  NERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSV 594

Query: 94   KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR-DQRWREVVELFFLMVQDG 152
               LL++YA+   +++ ++VF  M E +  +W++ IGA ++ +    + ++ F  M+Q G
Sbjct: 595  SNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAG 654

Query: 153  LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
              P+   F  IL A  +      G  +H+L++K  ++    + N++LA Y KC ++    
Sbjct: 655  WRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCE 714

Query: 213  RFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
              F  M E +D V+WNSMISGY   G   +A  L   M +   KL   TF  ++ +   +
Sbjct: 715  IIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASV 774

Query: 272  GQCDVAMEM-------------------------------VKRMESLGITPDVFTWTCMI 300
               +  ME+                                 R   L    ++++W  MI
Sbjct: 775  ATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMI 834

Query: 301  SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGF 359
            SG+A++G   +AL +F  M   G  P+ VT    +SAC+ +  +  G +   S+    G 
Sbjct: 835  SGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGL 894

Query: 360  TDDVLVGNSLINMYSKCEELEAAER-VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL-- 416
            +  +   + ++++  +  +++  E  +  M  D ++  W +++   C+A   G+  EL  
Sbjct: 895  SPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRAN--GRNTELGQ 952

Query: 417  -FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
               KM     P N + + +L + +   GN ++ V+    M K    K    SW ++  G
Sbjct: 953  RAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDG 1011


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 235/782 (30%), Positives = 387/782 (49%), Gaps = 80/782 (10%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           +  +L+AC         K +H   +K   +    V + +  +Y+ C +++ ARR F+ + 
Sbjct: 11  YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIP 70

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
               + WN +I  Y   G  D A  L+  M    ++    T+  ++++ + L   +  +E
Sbjct: 71  NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130

Query: 280 MVKRMESLGITPDVF-------------------------------TWTCMISGFAQNGR 308
           +    +  G+  DVF                                W  MI+G +  G 
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
              A+ L  +M   G+ PN  TI   +    + KAL  G  +H   V+  F + V+VG  
Sbjct: 191 CDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTG 250

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD-VPP 427
           L++MY+KC+ L  A ++FD++  ++  SW++MI GY  +    +A ELF +M   D + P
Sbjct: 251 LLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDP 310

Query: 428 NVITW-----------------------------------NVLISGYIQNGNEDEAVDLF 452
             +T                                    N L+S Y + G  D+A+  F
Sbjct: 311 TPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFF 370

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
             M   D V     S++++++G  Q G    AL +FR MQ S   P+  T+L VLPAC++
Sbjct: 371 DXMNPKDSV-----SFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSH 425

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 572
           L A       HG ++ R   +   + N+LID Y+K G I ++R +F+ M   DI++WN++
Sbjct: 426 LAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAM 485

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQ 632
           I GY +HG    AL LF  + + GLKP+  TF+ ++ + S +G+V  G+  F +++  + 
Sbjct: 486 IIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFS 545

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAI 692
           I+P +EH   M+D+ GR+G ++EA  FI +MP EPD  IW ALL+ACRIH NI+L     
Sbjct: 546 IVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVS 605

Query: 693 ERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTF 752
           +++  L P       L+  IY+  G+ +DA  +R  +++   +   G  WIE+  +V+ F
Sbjct: 606 KKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAF 665

Query: 753 VTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLALA 806
           V G  S      +   L+ +   +  R  +   C      +EEEEKE+I   HSEKLA+A
Sbjct: 666 VGGDQSHLQLSQINRKLEELLVEMK-RLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIA 724

Query: 807 FALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGD 866
           F ++ + +A   I + KN+R+C  CH   K+++++   EI + D+   HHFKNG C+CGD
Sbjct: 725 FGIL-NLKAGRPILVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNCGD 783

Query: 867 YW 868
           +W
Sbjct: 784 FW 785



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 171/639 (26%), Positives = 293/639 (45%), Gaps = 90/639 (14%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           +N Y++LL+ACI S S+  A+K+H  FL   +  D  V  KL  +Y  C  +  AR +F+
Sbjct: 8   KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFD 67

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
           ++   ++  W+ +I AY+ +  +   ++L+  M+  G+ P+ + +P +L+AC      E 
Sbjct: 68  EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +HS     G+     V  +++  Y KCG L+ A+R F SM  +D VAWN+MI+G   
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSL 187

Query: 236 IGENDEAHRLFDKM-----------------------------------CREEIKLGVVT 260
            G  D+A +L  +M                                    R     GVV 
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVV 247

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
              L+  Y    +C   +   K  + +G+  +V +W+ MI G+  +    +AL+LF +M 
Sbjct: 248 GTGLLDMY---AKCQCLLYARKIFDVMGVRNEV-SWSAMIGGYVXSDCMKEALELFDQMI 303

Query: 321 FVGVM-PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
               M P  VT+ S + AC  L  L+ G ++H   +K+G   D+L+GN+L++MY+KC  +
Sbjct: 304 LKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVI 363

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------- 432
           + A R FD +  KD  S++++++G  Q G    A  +F  MQ S + P++ T        
Sbjct: 364 DDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPAC 423

Query: 433 ----------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                                       N LI  Y + G    A ++F RM ++D V   
Sbjct: 424 SHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIV--- 480

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             SWN++I GY   G    ALG+F  + +    P+ +T + +L +C++   S  V E   
Sbjct: 481 --SWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSH---SGLVMEGRL 535

Query: 525 CVLRRSLESSL-PVMNS---LIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
                S + S+ P M     ++D   ++G I  +      M    D+  W++L+    +H
Sbjct: 536 WFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIH 595

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
                  ++  +++S G   + G F+ +   +S AG  D
Sbjct: 596 KNIELGEEVSKKIQSLG-PESTGNFVLLSNIYSAAGRWD 633



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 143/513 (27%), Positives = 231/513 (45%), Gaps = 44/513 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFV 93
           NG  + AI +  S+   G +  + TY  +L+AC    +I    ++H+   +   E DVFV
Sbjct: 87  NGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFV 146

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+  YAKCG L +A+ +F  M  R++  W+AMI   S      + V+L   M ++G+
Sbjct: 147 CTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGI 206

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+      +L   G       GK +H   ++        V   +L +Y KC  L++AR+
Sbjct: 207 CPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARK 266

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-------------------- 253
            F+ M  ++ V+W++MI GY       EA  LFD+M  ++                    
Sbjct: 267 IFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLT 326

Query: 254 ------------IKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                       IKLG    ++  N L+  Y + G  D A+     M       D  +++
Sbjct: 327 DLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFDXMNP----KDSVSFS 382

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            ++SG  QNG  + AL +F+ M   G+ P+  T+   + AC+ L AL  G   H   +  
Sbjct: 383 AIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVR 442

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           GF  D L+ N+LI+MYSKC ++  A  VF+ +   D+ SWN+MI GY   G   +A  LF
Sbjct: 443 GFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLF 502

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
             +    + P+ IT+  L+S    +G   E    F  M ++  +         ++    +
Sbjct: 503 HDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGR 562

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            G  + A    R M    F P+     ++L AC
Sbjct: 563 AGLIDEAHHFIRNMP---FEPDVRIWSALLSAC 592



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 165/364 (45%), Gaps = 21/364 (5%)

Query: 38  LNEAITVLDSIATQGA-KVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKT 95
           + EA+ + D +  + A      T  ++L+AC     +   RKLH ++  L   +D+ +  
Sbjct: 292 MKEALELFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGN 351

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            LLS+YAKCG +DDA   F+ M  ++  ++SA++    ++      + +F +M   G+ P
Sbjct: 352 TLLSMYAKCGVIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDP 411

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D      +L AC +    + G   H  +I  G +    + N+++ +Y KCGK+ +AR  F
Sbjct: 412 DLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVF 471

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
             MD  D V+WN+MI GY   G   EA  LF  +    +K   +TF  L+ S +  G   
Sbjct: 472 NRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSG--- 528

Query: 276 VAMEMVKRM------ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
             + M  R+          I P +    CM+    + G   +A    + M F    P+  
Sbjct: 529 --LVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPF---EPDVR 583

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFD 387
             ++ +SAC   K + +G E+      +G       GN ++  N+YS     + A  +  
Sbjct: 584 IWSALLSACRIHKNIELGEEVSKKIQSLGPES---TGNFVLLSNIYSAAGRWDDAAHIRI 640

Query: 388 MIKD 391
             KD
Sbjct: 641 TQKD 644


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 246/829 (29%), Positives = 403/829 (48%), Gaps = 77/829 (9%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A ++F++   +++  ++ ++  +SR+   RE + LF  +   GL  D       L+ CG 
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
             D   G+ +H   +K G      V  S++ +Y+K       R  F+ M  K+ V+W S+
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIK---------LGVVTFNILIRSYNQLGQ------- 273
           +SGY + G NDE   L ++M  E +          LG +    +I    Q+         
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236

Query: 274 ------CDVAMEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFKE 318
                 C+  + M  + E +G    VF         TW  MI G+A  G   +   +F  
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   GV  +     +A+  C+  + L    ++H   VK G+     +  +L+  YSKC  
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSS 356

Query: 379 LEAAERVFDMI-KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           ++ A ++F M     +V +W +MI G+ Q     KA +LF +M    V PN  T++ +++
Sbjct: 357 VDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLA 416

Query: 438 G-------------------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
           G                               Y++ GN  E+  +F  +   D V     
Sbjct: 417 GKPSSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIV----- 471

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS-NKVKEIHGC 525
           +W++++ G  Q      A+ VF ++      PN  T  SV+ AC+   A+    K+IH  
Sbjct: 472 AWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHAT 531

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
            ++    ++L V ++L+  Y+K GNI  +  +F     +DI++WNS+I GY  HG    A
Sbjct: 532 AVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKA 591

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           L++F  M++ GL  +  TF+ ++ A + AG+V+ G+K F  + + Y I    EHYS M+D
Sbjct: 592 LEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVD 651

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           LY R+G  ++AM+ I  MP     +IW  LL ACR+H N++L  LA E+L  L+P D + 
Sbjct: 652 LYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEKLVSLQPNDAVG 711

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
             L+  I+A+ G  E+   VRKL  E   +   G  WIE+KN +++F+ G  S  +SDL+
Sbjct: 712 YVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLAGDVSHPFSDLV 771

Query: 766 YSWLQNVPENVT-----ARSSHSGLCIEEEEKEEISGIHSEKLALAFALIG-SSQAPHTI 819
           Y+ L+ +   +        +++    +EEE KE I   HSE+LA+A+ LI     AP  I
Sbjct: 772 YAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQHSERLAIAYGLIALPPGAP--I 829

Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +I KN+R+C  CH   + +S++    + + DS   HHFK G CSCG YW
Sbjct: 830 QIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKGGVCSCGGYW 878


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 237/734 (32%), Positives = 366/734 (49%), Gaps = 88/734 (11%)

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           L+  +      PD  L P  L++C         + +H+  +  G++    V +S+L  Y+
Sbjct: 7   LYHFLRHVSFPPDPHLLPSALKSCPA---QPLARALHAAAVVSGLAEDPFVASSLLHSYI 63

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           + G    AR  F+ M EK+ V W+++I+GY   G+ + A  L ++M    ++  V+T+N 
Sbjct: 64  RLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNG 123

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+   N+ G+   A+  + RM S G  PD    +C                         
Sbjct: 124 LVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSC------------------------- 158

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
                     A+SA  D+K +++G ++H   VK G   D  V  +LI+MY KC   +   
Sbjct: 159 ----------ALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIV 208

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
           RVF      DV S N+++AG  +     +A  LF +     V  NV++W  +++  +QNG
Sbjct: 209 RVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNG 268

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
            + EAVDL                                    FR MQS    PN VTI
Sbjct: 269 RDLEAVDL------------------------------------FRTMQSIGVEPNSVTI 292

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
             VLPA A + A    +  H   LR+     + V ++L+D YAK G   ++RTIFD M S
Sbjct: 293 PCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPS 352

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           +++++WN++I GY +HG    A+ LF  M+    KP+  TF  ++ A S AG+ + G++ 
Sbjct: 353 RNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRY 412

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           F  + + + I P +EHY+ M+ L GRSGKL+EA + I +MP EPDS IW +LL +CR++G
Sbjct: 413 FNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYG 472

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
           N+ LA +A E+LF LEPG+     L+  IYA     +   +VR   +    +   G  WI
Sbjct: 473 NVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWI 532

Query: 744 EVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEE 794
           E+KN V+  + G  S      +   L      +T   +  G           +EE+EK+ 
Sbjct: 533 EIKNKVHMLLAGDNSHPMMTAITEKLN----QLTIEMNRLGFAPSRDFVLHDVEEQEKDN 588

Query: 795 ISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCL 854
           I  +HSEKLA+A  LI S++    +R++KN+R+C  CHE  K++S     EI + D+   
Sbjct: 589 ILAVHSEKLAVALGLI-STRPGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRF 647

Query: 855 HHFKNGQCSCGDYW 868
           HHFK+G+CSCGDYW
Sbjct: 648 HHFKDGKCSCGDYW 661



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/568 (25%), Positives = 236/568 (41%), Gaps = 114/568 (20%)

Query: 75  LARKLHA--FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY 132
           LAR LHA   ++ + E D FV + LL  Y + G    AR VF+ M E+N+  WSA+I  Y
Sbjct: 35  LARALHAAAVVSGLAE-DPFVASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGY 93

Query: 133 S-----------------------------------RDQRWREVVELFFLMVQDGLFPDD 157
           S                                   R  R  + V     M  +G FPD 
Sbjct: 94  SARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDA 153

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
                 L A G+  +   GK +H  V+K G      V  +++ +Y KCG+     R F  
Sbjct: 154 TGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHE 213

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDK-MCREEIKLGVVTFNILIRSYNQLGQCDV 276
               D  + N++++G  +  +  EA  LF + +CR                         
Sbjct: 214 SSHMDVASCNALVAGLSRNAQVSEALLLFREFICR------------------------- 248

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
                      G+  +V +WT +++   QNGR  +A+DLF+ M  +GV PN VTI   + 
Sbjct: 249 -----------GVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLP 297

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           A  ++ AL  G   H  +++ GF  DV VG++L++MY+KC +   A  +FD +  ++V S
Sbjct: 298 AFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVS 357

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMG 456
           WN+MI GY   G    A +LF  MQ+    P+++T+  ++    Q G  +E    F  M 
Sbjct: 358 WNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQ 417

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
           +   +      +  ++    + G+ + A  +  +M    F P+     S+L +C      
Sbjct: 418 QGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMP---FEPDSCIWGSLLGSC------ 468

Query: 517 NKVKEIHGCVL--RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
                ++G VL    + E    +       Y    NI  S+ ++DG++            
Sbjct: 469 ----RVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVNR----------- 513

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRG 602
                        + D+MK+ GLK  +G
Sbjct: 514 -------------VRDEMKNMGLKKEKG 528



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 175/416 (42%), Gaps = 78/416 (18%)

Query: 310 SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL 369
           S +  L+  +  V   P+   + SA+ +C    A  +   +H+ AV  G  +D  V +SL
Sbjct: 2   SHSNSLYHFLRHVSFPPDPHLLPSALKSC---PAQPLARALHAAAVVSGLAEDPFVASSL 58

Query: 370 INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           ++ Y +     AA  VFD + +K+V  W+++IAGY   G    A+ L  +M+ + V PNV
Sbjct: 59  LHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNV 118

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
           ITWN L+SG  ++G   +AV    R                                   
Sbjct: 119 ITWNGLVSGLNRSGRALDAVTALVR----------------------------------- 143

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
            M S  F+P+   +   L A   +   +  K++HG V++        V+ +LID Y K G
Sbjct: 144 -MHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCG 202

Query: 550 ---------------NIVYSRTIFDGMSSK--------------------DIITWNSLIC 574
                          ++     +  G+S                      ++++W S++ 
Sbjct: 203 RADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVA 262

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC-SITECYQI 633
             V +G    A+DLF  M+S G++PN  T   ++ A +    +  G+   C S+ + +  
Sbjct: 263 CCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGF-- 320

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
           +  +   SA++D+Y + GK   A    + MP     S W A++    +HG+   AV
Sbjct: 321 LHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVS-WNAMIGGYAMHGDAANAV 375


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 247/784 (31%), Positives = 394/784 (50%), Gaps = 72/784 (9%)

Query: 46  DSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAK 103
           DS+A Q         +++LQ C D + +   R+ HA + LV  I  +  + TKLL +Y  
Sbjct: 43  DSLAPQ--------LVSILQTCTDPSGLSQGRQAHAQM-LVNGIGYNGILGTKLLGMYVL 93

Query: 104 CGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKI 163
           CG   DA+ +F  +R      W+ MI  ++   ++   +  +F M+  G  PD + FP +
Sbjct: 94  CGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYV 153

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG 223
           ++ACG       G+++H  +  +G      V +S++  Y + G +  AR  F+ M  KDG
Sbjct: 154 IKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDG 213

Query: 224 VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------NILIRSYNQLGQC 274
           V WN M++GY + G+ D A  +F +M R E     VTF          I+I   +QL   
Sbjct: 214 VLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGL 273

Query: 275 DVA--MEM--------------------VKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
            V+  +EM                     +R+  +    D+ TW  MISG+ QNG   +A
Sbjct: 274 VVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEA 333

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
             LF EM    + P+ +T +S +   ++   L  G EIH   ++ G + DV + ++LI++
Sbjct: 334 SCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDI 393

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y KC ++E A ++FD     D+    +MI+GY   G    A E+F  + +  +  N +T 
Sbjct: 394 YFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTL 453

Query: 433 NVLIS---------------GYI-QNGNEDEA------VDLFQRMGKNDKVK-------- 462
             ++                G+I +NG+          +D++ + G+ D           
Sbjct: 454 ASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISD 513

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
           ++   WNS+I    Q G+   A+ +FR+M  +    +CV+I + L ACA L A +  KEI
Sbjct: 514 KDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEI 573

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           H  ++R +  S L   ++LID Y+K GN+  +  +FD M  K+ ++WNS+I  Y  HG  
Sbjct: 574 HAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRL 633

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
             +L+LF  M   G++P+  TFL+II A   AG VD G   F  +TE   I+  +EHY+ 
Sbjct: 634 KDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYAC 693

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           M+DL+GR+G+L EA   I  MP  PD+ +W  LL ACR+HGN++LA +A   LFDL+P +
Sbjct: 694 MVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQN 753

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYS 762
                L+  ++A  G+ E  LK+R L +E   +   G  WI+V N  + FV    S   S
Sbjct: 754 SGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQS 813

Query: 763 DLLY 766
             +Y
Sbjct: 814 SQIY 817



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 176/367 (47%), Gaps = 16/367 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG  N A+ +   +  +  +    T  ++L AC    ++ L ++LH   L        +V
Sbjct: 428 NGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYV 487

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + ++ +YAKCG LD A + F  + +++   W++MI + S++ +  E ++LF  M   G 
Sbjct: 488 GSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGT 547

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             D       L AC N      GK +H+ +++          ++++ +Y KCG L  A R
Sbjct: 548 KYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACR 607

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F++M+EK+ V+WNS+I+ Y   G   ++  LF  M  + I+   VTF  +I +    GQ
Sbjct: 608 VFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQ 667

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            D  +   + M E LGI   +  + CM+  F + GR ++A  +   M F    P+     
Sbjct: 668 VDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFS---PDAGVWG 724

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS-----LINMYSKCEELEAAERVFD 387
           + + AC     L   +E+  +A +  F  D+   NS     L N+++   + E+  ++  
Sbjct: 725 TLLGACR----LHGNVELAEVASRNLF--DLDPQNSGYYVLLSNVHANAGQWESVLKIRS 778

Query: 388 MIKDKDV 394
           ++K++ V
Sbjct: 779 LMKERGV 785


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 248/800 (31%), Positives = 396/800 (49%), Gaps = 107/800 (13%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV--RNSVLAVYVKCGKLIWARR 213
           D +   ++LQ C   GD  AG+ +H+ V++ G          N +L +Y K G L  ARR
Sbjct: 46  DSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARR 105

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE--EIKLGVVTFNI-------- 263
            F+ M E++ V++ +++ GY   G  +EA  LF ++ RE  E+   V+T  +        
Sbjct: 106 LFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDA 165

Query: 264 -------------------------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
                                    LI +Y+  G    A  +   +    I  D  TWT 
Sbjct: 166 PGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGI----IWKDAVTWTA 221

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           M+S +++N     AL+ F +M   G  PN   +TS + A   L +  +G  IH  AVK  
Sbjct: 222 MVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTL 281

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              +  VG +L++MY+KC  +E A  VF++I   DV  W+ +I+ Y Q+    +A+E+F+
Sbjct: 282 CDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFL 341

Query: 419 KMQESDVPPN-----------------------------------VITWNVLISGYIQNG 443
           +M  S V PN                                   +   N L+  Y +  
Sbjct: 342 RMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCR 401

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           N + ++++F+ +   ++V     SWN++I GY Q G   +AL VF++M+++      VT 
Sbjct: 402 NMENSLEIFRSLRDANEV-----SWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTF 456

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
            SVL ACA   +     +IH  + + +  +   V NSLIDTYAK G I  +  +F+ +  
Sbjct: 457 SSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQ 516

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
            D+++WN++I GY LHG    AL+LF++M     KPN  TF++++      G+V+ G  +
Sbjct: 517 CDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSL 576

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           F S+T  ++I P ++HY+ ++ L GR+G+L +A++FI D+P  P   +W ALL++C +H 
Sbjct: 577 FNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHK 636

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
           N+ L   + E++ ++EP D     L+  +YA  G  +    +RK  R    +   G  W+
Sbjct: 637 NVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWV 696

Query: 744 EVKNLVYTFVTGGWSESYSDL-----LYSWLQ-------NVPE-NVTARSSHSGLCIEEE 790
           E+K  V+ F  G  S  + D+     +  WL         VP+ NV          ++EE
Sbjct: 697 EIKGEVHAFSVG--SADHPDMRIINAMLEWLNLKASREGYVPDINVVLHD------VDEE 748

Query: 791 EKEEISGIHSEKLALAFALIGSSQAP--HTIRIVKNIRMCVHCHETAKYVSMMHHCEIFL 848
           EK  +  +HSE+LALA+ L   S  P  H IRI+KN+R C+ CH   K +S +   EI +
Sbjct: 749 EKARMLWVHSERLALAYGL---SMTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQREIVV 805

Query: 849 ADSKCLHHFKNGQCSCGDYW 868
            D    HHF  G CSCGDYW
Sbjct: 806 RDINRFHHFDEGICSCGDYW 825



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 165/654 (25%), Positives = 299/654 (45%), Gaps = 81/654 (12%)

Query: 39  NEAITVLDSIATQGAKVRRNTYI--NLLQACIDSNSIHLARKLHAFL---NLVTEIDVFV 93
           N A+  LD      A  + ++Y    LLQ CI        R +HA +     V ++D F 
Sbjct: 27  NAALQWLDDELASLALPKLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFC 86

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              LL++YAK G L  AR +F+ M ERN+ ++  ++  Y+    + E   LF  + ++G 
Sbjct: 87  ANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGH 146

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             + F+   IL+             +H+   KLG      V +S++  Y  CG +  AR 
Sbjct: 147 EVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARC 206

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR-----SY 268
            F+ +  KD V W +M+S Y +    ++A   F KM     K        +++     S 
Sbjct: 207 VFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSS 266

Query: 269 NQLGQ----------CD----VAMEMVKRMESLG----------ITP--DVFTWTCMISG 302
             LG+          CD    V   ++      G          I P  DV  W+ +IS 
Sbjct: 267 AVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISR 326

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           +AQ+ +  QA ++F  M    V+PN  +++  + AC ++  L +G +IH+L +K+G+  +
Sbjct: 327 YAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESE 386

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           + VGN+L+++Y+KC  +E +  +F  ++D +  SWN++I GYCQ+G+   A  +F +M+ 
Sbjct: 387 LFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRA 446

Query: 423 SDVPPNVITW-----------------------------------NVLISGYIQNGNEDE 447
           + V    +T+                                   N LI  Y + G   +
Sbjct: 447 AHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRD 506

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           A+ +F+ + + D V     SWN++I+GY   G+  +AL +F +M  S   PN VT +++L
Sbjct: 507 ALKVFESIIQCDVV-----SWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALL 561

Query: 508 PACAYLVASNK-VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS-RTIFDGMSSKD 565
             C      N+ +   +   +   ++ S+     ++    ++G +  + + I D  S+  
Sbjct: 562 SVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPS 621

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSLAGMVD 618
            + W +L+   V+H   + AL  F   K   ++P +  T++ +   ++ AG++D
Sbjct: 622 PMVWRALLSSCVVHK--NVALGKFSAEKVLEIEPQDETTYVLLSNMYAAAGILD 673



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 131/507 (25%), Positives = 238/507 (46%), Gaps = 35/507 (6%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           G   EA  +   +  +G +V       +L+  +  ++  L   +HA    L  + + FV 
Sbjct: 129 GGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHACACKLGHDRNAFVG 188

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           + L+  Y+ CG +  AR VF+ +  ++  TW+AM+  YS +    + +  F  M   G  
Sbjct: 189 SSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAK 248

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+ F+   +L+A         GK +H   +K        V  ++L +Y KCG +  AR  
Sbjct: 249 PNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTV 308

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           FE +   D + W+ +IS Y Q  +N++A  +F +M R  +     + + ++++   +   
Sbjct: 309 FEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFL 368

Query: 275 DVAMEMVKRMESLGITPDVF-------------------------------TWTCMISGF 303
           D+  ++   +  LG   ++F                               +W  +I G+
Sbjct: 369 DLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGY 428

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
            Q+G    AL +F+EM    V+   VT +S + AC +  ++   ++IHSL  K  F +D 
Sbjct: 429 CQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDT 488

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
           +V NSLI+ Y+KC  +  A +VF+ I   DV SWN++I+GY   G    A ELF +M +S
Sbjct: 489 IVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKS 548

Query: 424 DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
           D  PN +T+  L+S     G  ++ + LF  M  + ++K +   +  ++    + G+ N+
Sbjct: 549 DTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLND 608

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPAC 510
           AL     + S+   P+ +   ++L +C
Sbjct: 609 ALKFIGDIPST---PSPMVWRALLSSC 632



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 123/269 (45%), Gaps = 5/269 (1%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDV 91
           C +G   +A++V   +        + T+ ++L+AC ++ SI    ++H+ +   T   D 
Sbjct: 429 CQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDT 488

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            V   L+  YAKCGC+ DA +VFE + + ++ +W+A+I  Y+   R  + +ELF  M + 
Sbjct: 489 IVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKS 548

Query: 152 GLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
              P+D  F  +L  CG+ G    G  L +S+ +   +         ++ +  + G+L  
Sbjct: 549 DTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRLND 608

Query: 211 ARRFFESMDEKDG-VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
           A +F   +      + W +++S    + +N    +   +   E       T+ +L   Y 
Sbjct: 609 ALKFIGDIPSTPSPMVWRALLSSCV-VHKNVALGKFSAEKVLEIEPQDETTYVLLSNMYA 667

Query: 270 QLGQCDVAMEMVKRMESLGITPDV-FTWT 297
             G  D    + K M ++G+  +V  +W 
Sbjct: 668 AAGILDQVALLRKSMRNIGVKKEVGLSWV 696


>gi|347954466|gb|AEP33733.1| chlororespiratory reduction 21, partial [Lepidium sativum]
          Length = 805

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 224/768 (29%), Positives = 403/768 (52%), Gaps = 37/768 (4%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTE 88
           LC +G + EA+ ++  +  +  ++    Y  +LQ C+    +   +++HA +        
Sbjct: 23  LCKHGEIREALRLVKEMDFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGAFYA 82

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            + +++TKLL  YAKC  L+ A+++F  +R RN+++W+A+IG   R       +  F  M
Sbjct: 83  RNEYIETKLLIFYAKCDALEVAQDLFSRLRVRNVFSWAAIIGLKCRIGLCEGALLGFVEM 142

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           +++G+ PD+++ P + +ACG       G+ +H  V+K G+     V +S+  +Y KCG L
Sbjct: 143 LENGVLPDNYVVPNVCKACGALHWSWFGRGVHGYVLKAGLHDCVFVASSLADMYGKCGVL 202

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             AR  F+ + E++ VAWN+++ GY Q G N+EA RL   M +E I+   VT +  + + 
Sbjct: 203 DDARMVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSAS 262

Query: 269 NQLGQCDV-----AMEMVKRME---SLG-----------------------ITPDVFTWT 297
             +G  +      A+ +V  +E    LG                       I  D+ TW 
Sbjct: 263 ANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDRIIGKDIVTWN 322

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            +ISG+ Q G    A+ + K M    +  + VT+++ +SA    + L +G E+   +++ 
Sbjct: 323 LLISGYVQQGLVDDAMYMCKLMRLENLRYDSVTLSTLMSAAARTQNLNLGKEVQCYSIRH 382

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            F  ++++ +S ++MY+KC  +  A++VF+   +KD+  WN+++A Y  +G  G+A +LF
Sbjct: 383 SFESEIVLASSTVDMYAKCGSIVDAKKVFESTAEKDLILWNTLLAAYADSGLSGEALKLF 442

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
             M    VPPN+ITWN +I  +++NG  DEA ++F +M ++  +  N  SW +++ G+ Q
Sbjct: 443 YDMLLESVPPNIITWNSIILSFLRNGQVDEAKEMFLQM-QSSGIFPNLISWTTMMNGWVQ 501

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLP 536
            G    A+   RKMQ S   PN  TI   L AC +LV+ N  + IHG ++R     SS+ 
Sbjct: 502 NGCSEEAIIFLRKMQESGLRPNAFTISVALSACTHLVSLNFGRSIHGYIIRNFQHSSSVS 561

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
              SL+D YAK G+I  +  +F      ++   N++I  Y L+G    ++ L+ +++   
Sbjct: 562 FETSLVDLYAKCGDINQAEKVFGNKLYDELPLHNAMISAYALYGNVKESITLYRRLEDMA 621

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           +KP+  TF S++ A + AG +     +F  +   + + P +EHY  M+D+   SG+  +A
Sbjct: 622 MKPDNITFTSLLYACTHAGDIVQAINIFTEMVSKHDMKPCLEHYGLMVDILASSGETNKA 681

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
           +E IE+MP +PD+ + ++L+ +C      +L      +L + EP +      I   YAI 
Sbjct: 682 LELIEEMPYKPDARMIQSLVASCNKQHKTELVDYLSRQLLESEPENSGNYVTISNAYAIE 741

Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEVKNL-VYTFVTGGWSESYSD 763
           G   + +K+R++ +    +   G  WI++K   V+ FV    +   +D
Sbjct: 742 GSWNEVMKMREMMKAKGLKKKPGCSWIQIKGEGVHVFVANDMTHIKND 789



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 203/445 (45%), Gaps = 45/445 (10%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            P   ++   IS   ++G   +AL L KEM F  V          +  C   + L  G +
Sbjct: 10  NPSSSSYFHQISSLCKHGEIREALRLVKEMDFRNVRIGPEIYGEILQGCVYERDLCTGQQ 69

Query: 350 IHSLAVKMG--FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
           IH+  +K G  +  +  +   L+  Y+KC+ LE A+ +F  ++ ++V+SW ++I   C+ 
Sbjct: 70  IHARILKNGAFYARNEYIETKLLIFYAKCDALEVAQDLFSRLRVRNVFSWAAIIGLKCRI 129

Query: 408 GYCGKAYELFIKMQESDV-PPNVITWNVL--------------ISGYIQNGNEDEAV--- 449
           G C  A   F++M E+ V P N +  NV               + GY+      + V   
Sbjct: 130 GLCEGALLGFVEMLENGVLPDNYVVPNVCKACGALHWSWFGRGVHGYVLKAGLHDCVFVA 189

Query: 450 ----DLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
               D++ + G  D  +        RN  +WN+L+ GY Q G    A+ +   M+     
Sbjct: 190 SSLADMYGKCGVLDDARMVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIE 249

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P  VT+ + L A A +    + K+ H   +   LE    +  S+++ Y K G I Y+  I
Sbjct: 250 PTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMI 309

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           FD +  KDI+TWN LI GYV  G    A+ +   M+   L+ +  T  +++ A +    +
Sbjct: 310 FDRIIGKDIVTWNLLISGYVQQGLVDDAMYMCKLMRLENLRYDSVTLSTLMSAAARTQNL 369

Query: 618 DLGKKVFCSITECYQIIPMIEH----YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           +LGK+V     +CY I    E      S+ +D+Y + G + +A +  E    E D  +W 
Sbjct: 370 NLGKEV-----QCYSIRHSFESEIVLASSTVDMYAKCGSIVDAKKVFESTA-EKDLILWN 423

Query: 674 ALLTACRIHGNIDLAVLAIERLFDL 698
            LL A   + +  L+  A++  +D+
Sbjct: 424 TLLAA---YADSGLSGEALKLFYDM 445


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 249/754 (33%), Positives = 383/754 (50%), Gaps = 60/754 (7%)

Query: 117 MRERNLYTWS----AMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACG-NCG 171
           MR     TW     A   AY +         L+  M+ + L  D++ +P ++QAC     
Sbjct: 169 MRYPQANTWKMPAKASRRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRS 228

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
           ++EA K +H+ V+KLG      VRN+++  +  C  +  A R F      D V+WNS+++
Sbjct: 229 EWEA-KQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILA 287

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
           GY +IG  +EA  ++ +M    I    +  N +I  +   G    A ++   M    +  
Sbjct: 288 GYIEIGNVEEAKHIYHQMPERSI----IASNSMIVLFGMRGLVVEACKLFDEM----LEK 339

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           D+ TW+ +I+ F QN    +A+  F  M  +GVM + V   SA+SAC +L  + MG  IH
Sbjct: 340 DMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIH 399

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           SL++K+G    + + N+LI MYSKC ++  A ++FD     D+ SWNSMI+GY +     
Sbjct: 400 SLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVD 459

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
            A  +F  M E D    V++W+ +ISGY QN   DE + LFQ                  
Sbjct: 460 NAKAIFDSMPEKD----VVSWSSMISGYAQNDLFDETLALFQ------------------ 497

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
                             +MQ S F P+  T++SV+ ACA L A  + K +H  + R  L
Sbjct: 498 ------------------EMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGL 539

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
             ++ +  +LID Y K G +  +  +F GM  K I TWN+LI G  ++G   ++LD+F  
Sbjct: 540 TINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSN 599

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           MK   + PN  TF+ ++ A    G+VD G+  F S+   ++I P ++HY  M+DL GR+G
Sbjct: 600 MKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAG 659

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
           KL+EA E +  MP+ PD + W ALL AC+ HG+ ++      +L +L+P       L+  
Sbjct: 660 KLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSN 719

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN 771
           IYA  GK +D L++R +  ++      G   IE   +++ F+ G  +    D +   L  
Sbjct: 720 IYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVE 779

Query: 772 VP-----ENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIR 826
           +      E  T   +   L ++EEEKE     HSEKLA+AF LI  S  P  IRI+KN+R
Sbjct: 780 MAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINIS-PPTPIRIMKNLR 838

Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNG 860
           +C  CH  AK +S     +I + D    HHF+ G
Sbjct: 839 ICNDCHTAAKLISKAFCRKIVVRDRHRFHHFEQG 872



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 227/473 (47%), Gaps = 56/473 (11%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKL 97
            NE+ +VLDS+          ++ ++L   I+  ++  A+ ++   + + E  +     +
Sbjct: 271 FNES-SVLDSV----------SWNSILAGYIEIGNVEEAKHIY---HQMPERSIIASNSM 316

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           + ++   G + +A ++F++M E+++ TWSA+I  + +++ + E +  F  M + G+  D+
Sbjct: 317 IVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDE 376

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
            +    L AC N      GKL+HSL +K+G      ++N+++ +Y KCG ++ AR+ F+ 
Sbjct: 377 VVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDE 436

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
               D ++WNSMISGY +    D A  +FD M  ++    VV+++ +I  Y Q    D  
Sbjct: 437 AYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKD----VVSWSSMISGYAQNDLFDET 492

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
           + + + M+  G  PD                                     T+ S ISA
Sbjct: 493 LALFQEMQMSGFKPD-----------------------------------ETTLVSVISA 517

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C  L AL  G  +H+   + G T +V++G +LI+MY KC  +E A  VF  + +K + +W
Sbjct: 518 CARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTW 577

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
           N++I G    G    + ++F  M++  V PN IT+  ++      G  DE    F  M  
Sbjct: 578 NALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIH 637

Query: 458 NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           + K++ N   +  ++    + G+   A  +  +M  +   P+  T  ++L AC
Sbjct: 638 DHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMT---PDVATWGALLGAC 687



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 123/251 (49%), Gaps = 8/251 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVF 92
           N   +E + +   +   G K    T ++++ AC    ++   + +HA++  N +T I+V 
Sbjct: 486 NDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLT-INVI 544

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           + T L+ +Y KCGC++ A EVF  M E+ + TW+A+I   + +      +++F  M +  
Sbjct: 545 LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH 604

Query: 153 LFPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           + P++  F  +L AC + G  + G+   +S++    +    +    ++ +  + GKL  A
Sbjct: 605 VTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEA 664

Query: 212 RRFFESMDEKDGVA-WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-YN 269
                 M     VA W +++    + G+++   R+  K+   E++     F++L+ + Y 
Sbjct: 665 EELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLI--ELQPDHDGFHVLLSNIYA 722

Query: 270 QLGQCDVAMEM 280
             G+ D  +E+
Sbjct: 723 SKGKWDDVLEI 733


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 246/784 (31%), Positives = 394/784 (50%), Gaps = 92/784 (11%)

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVR-RVRNSVLAVYVKCGKLIWARRFFESMDEK 221
           I++ CG+  D   GK +H+L ++ G      RV  S++ +Y+    ++  R+ FE M ++
Sbjct: 61  IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGMLKR 120

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKMCRE----------------------------- 252
           + V W S+++GY Q G   +   LF +M  E                             
Sbjct: 121 NVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVH 180

Query: 253 --EIKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN 306
              IK G    V   N L+  Y + G  + A  +  RME    T D+ +W  +++G   N
Sbjct: 181 AQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRME----TRDMVSWNTLMAGLVLN 236

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           GR  +AL LF +      M    T ++ I+ C +LK L +  ++HS  +K GF     V 
Sbjct: 237 GRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVM 296

Query: 367 NSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
            +L++ Y+K  +L+ A  VF ++   ++V SW +MI G  Q G    A  LF +M+E  V
Sbjct: 297 TALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGV 356

Query: 426 PPNVITWNVLIS-------------------------------GYIQNGNEDEAVDLFQR 454
            PN +T++ +++                                Y +  + +EA+ +F+ 
Sbjct: 357 APNDLTYSTILTVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKM 416

Query: 455 MGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV 514
           + + D V     SW++++  Y Q G  N A   F KM      PN  TI S + ACA   
Sbjct: 417 IDQKDVV-----SWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPA 471

Query: 515 ASNKV-KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
           A   + ++ H   ++     +L V ++L+  YA+ G+I  ++ +F+  + +D+++WNS++
Sbjct: 472 AGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSML 531

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
            GY  HG+   ALD+F QM+  G+  +  TFLS+I+  + AG+V+ G++ F  +   Y I
Sbjct: 532 SGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGI 591

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
            P ++HY+ M+DLY R+GKL+E M  IE MP     +IW ALL ACR+H N++L  LA E
Sbjct: 592 TPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAE 651

Query: 694 RLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFV 753
           +L  LEP D     L+  IY+  GK ++  +VRKL      R   G  WI++KN V+ F+
Sbjct: 652 KLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFI 711

Query: 754 TGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLA 804
               S   S+ +Y+ L+     +TA+    G C         + E++KE +  +HSE+LA
Sbjct: 712 ASDKSHPLSEQIYAKLR----AMTAKLKQEGYCPDTSFVPHDVAEDQKEAMLAMHSERLA 767

Query: 805 LAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
           LAF LI +  A   + I KN+R+    H   K VS +   EI + D    HHFK+G CSC
Sbjct: 768 LAFGLIATPPAA-PLHIFKNLRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHFKSGVCSC 826

Query: 865 GDYW 868
           GD+W
Sbjct: 827 GDFW 830



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 162/610 (26%), Positives = 274/610 (44%), Gaps = 87/610 (14%)

Query: 45  LDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYA 102
           LD+   QG  V     + +++ C       L ++LHA          D+ V T L+ +Y 
Sbjct: 43  LDAHRRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYM 102

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
               + D R+VFE M +RN+ TW++++  Y +     +V+ LFF M  +G++P+ F F  
Sbjct: 103 NWHSVLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSS 162

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           +L    + G  + G+ +H+  IK G      V NS++ +Y KCG +  AR  F  M+ +D
Sbjct: 163 VLSMVASQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRD 222

Query: 223 GVAWNSMISGYFQIGENDEAHRLFD------------------KMCREEIKLGVV----- 259
            V+WN++++G    G + EA +LF                    +C     LG+      
Sbjct: 223 MVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHS 282

Query: 260 ------------TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
                           L+ +YN+ GQ D A+++   M     + +V +WT MI G  QNG
Sbjct: 283 SVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSG---SQNVVSWTAMIDGCIQNG 339

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
               A  LF  M   GV PN +T ++ ++    +   +   +IH+  +K  +     VG 
Sbjct: 340 DIPLAAALFSRMREDGVAPNDLTYSTILT----VSEASFPPQIHAQVIKTNYECTPTVGT 395

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           +L+  YSK    E A  +F MI  KDV SW++M+  Y QAG C  A   FIKM    + P
Sbjct: 396 ALMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKP 455

Query: 428 NVITW------------------------------------NVLISGYIQNGNEDEAVDL 451
           N  T                                     + L+S Y + G+ + A  +
Sbjct: 456 NEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCV 515

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           F+R     +  R+  SWNS+++GY Q G    AL VFR+M+      + +T LSV+  CA
Sbjct: 516 FER-----QTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCA 570

Query: 512 YLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITW 569
           +     + ++    ++R   +  ++     ++D Y+++G +  + ++ +GM        W
Sbjct: 571 HAGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIW 630

Query: 570 NSLICGYVLH 579
            +L+    +H
Sbjct: 631 RALLGACRVH 640



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 201/471 (42%), Gaps = 43/471 (9%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF-- 92
           NGR  EA+ +     +    +  +TY  ++  C +   + LAR+LH+ + L      +  
Sbjct: 236 NGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSV-LKHGFHSYGN 294

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMR-ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           V T L+  Y K G LD A +VF  M   +N+ +W+AMI    ++        LF  M +D
Sbjct: 295 VMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMRED 354

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+ P+D  +  IL       +      +H+ VIK    C   V  +++  Y K      A
Sbjct: 355 GVAPNDLTYSTIL----TVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEA 410

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI------ 265
              F+ +D+KD V+W++M++ Y Q G+ + A   F KM    +K    T +  I      
Sbjct: 411 LSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASP 470

Query: 266 -----------------RSYNQLGQCDVAMEMVKRMESL---------GITPDVFTWTCM 299
                            R ++ L      + M  R  S+             D+ +W  M
Sbjct: 471 AAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSM 530

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK-MG 358
           +SG+AQ+G + +ALD+F++M   G+  +G+T  S I  C     +  G +   L V+  G
Sbjct: 531 LSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYG 590

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            T  +     ++++YS+  +L+    + + M        W +++ G C+     +  +L 
Sbjct: 591 ITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALL-GACRVHKNVELGKLA 649

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
            +   S  P +  T+ +L + Y   G   E  ++ + M      K    SW
Sbjct: 650 AEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSW 700


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 252/847 (29%), Positives = 413/847 (48%), Gaps = 102/847 (12%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKL 97
           L  A  V  +I T G +   +    L+     S+ +  AR+L    + ++E D   +T +
Sbjct: 30  LQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQL---FDEISEPDKIARTTM 86

Query: 98  LSVYAKCGCLDDAREVFED--MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
           +S Y   G +  AR VFE+  +  R+   ++AMI  +S +      + LF  M  +G  P
Sbjct: 87  VSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKP 146

Query: 156 DDFLFPKILQACGNCGDFEAGKL-MHSLVIKLGMSCVRRVRNSVLAVYVKCGK----LIW 210
           DDF +  +L       D E   +  H+  +K G   V  V N++++VY +C      L  
Sbjct: 147 DDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHS 206

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           AR+ F+ + EKD  +W +M++GY + G  D    L   M                     
Sbjct: 207 ARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGM--------------------- 245

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
               D  M++V              +  MISG+   G   +AL++ + M   G+  +  T
Sbjct: 246 ----DENMKLV-------------AYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFT 288

Query: 331 ITSAISACTDLKALAMGMEIHSLAVK---MGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             S I AC + + L +G ++H+  ++     F  D    NSL+ +Y KC           
Sbjct: 289 YPSVIRACANARLLQLGKQVHAYVLRREDFSFHFD----NSLVTLYYKC----------- 333

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
                               G   +A  +F KM   D+    ++WN L+SGY+ +G+  E
Sbjct: 334 --------------------GKFNEARAIFEKMPAKDL----VSWNALLSGYVSSGHIGE 369

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           A  +F+ M +     +N  SW  +I+G  + G     L +F  M+   F P        +
Sbjct: 370 AKLIFKEMKE-----KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAI 424

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
            +CA L A    ++ H  +++   +SSL   N+LI  YAK G +  ++ +F  M   D +
Sbjct: 425 KSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSV 484

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
           +WN+LI     HG    A+D++++M   G++P+R TFL+++ A S AG+VD G+K F S+
Sbjct: 485 SWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSM 544

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
              Y+I P  +HY+ +IDL  RSGK  EA   IE +P +P + IWEALL+ CR+HGN++L
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMEL 604

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
            ++A ++LF L P       L+  +YA  G+ E+  +VRKL R+   +      WIE++ 
Sbjct: 605 GIIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMET 664

Query: 748 LVYTFVTGGWSESYSDLLYSWLQNVPENVT--ARSSHSGLCIEEEE----KEEISGIHSE 801
            V+TF+    S   ++ +Y +LQ++ + +        +   + + E    KE++   HSE
Sbjct: 665 QVHTFLVDDTSHPEAEAVYKYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSE 724

Query: 802 KLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQ 861
           K+A+AF L+       TIRI KN+R C  CH   +++S +   +I L D K  HHF+NG+
Sbjct: 725 KIAVAFGLMKLPPGT-TIRIFKNLRTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGE 783

Query: 862 CSCGDYW 868
           CSCG++W
Sbjct: 784 CSCGNFW 790



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/397 (22%), Positives = 184/397 (46%), Gaps = 48/397 (12%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
           G   EA+ ++  + + G ++   TY ++++AC ++  + L +++HA++    +       
Sbjct: 265 GLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFHFDN 324

Query: 96  KLLSVYAKCGCLDDAREVFE-------------------------------DMRERNLYT 124
            L+++Y KCG  ++AR +FE                               +M+E+N+ +
Sbjct: 325 SLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           W  MI   + +    E ++LF  M ++G  P D+ F   +++C   G +  G+  H+ ++
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLV 444

Query: 185 KLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHR 244
           K+G        N+++ +Y KCG +  A++ F +M   D V+WN++I+   Q G   EA  
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVD 504

Query: 245 LFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGF 303
           ++++M ++ I+   +TF  ++ + +  G  D   +    ME++  I P    +  +I   
Sbjct: 505 VYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLL 564

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
            ++G+ S+A  + + + F    P      + +S C     +   ME+  +A    F    
Sbjct: 565 CRSGKFSEAESIIESLPF---KPTAEIWEALLSGCR----VHGNMELGIIAADKLFG--- 614

Query: 364 LVGNS------LINMYSKCEELEAAERVFDMIKDKDV 394
           L+         L NMY+   + E   RV  +++D+ V
Sbjct: 615 LIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGV 651



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 187/389 (48%), Gaps = 19/389 (4%)

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           +L +   +H   +  GF     + N LI++Y K  EL+ A ++FD I + D  +  +M++
Sbjct: 29  SLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVS 88

Query: 403 GYCQAGYCGKAYELFIKMQESDVP-PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
           GYC +G    A  +F   +E+ V   + + +N +I+G+  N +   A++LF +M K++  
Sbjct: 89  GYCASGDIALARSVF---EETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKM-KHEGF 144

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFR--KMQSSCFYPNCVT--ILSVLPACAYLVASN 517
           K +  ++ S++AG   +         F    ++S   Y   V+  ++SV   CA   +S 
Sbjct: 145 KPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCA---SSP 201

Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGY 576
            +      V     E       +++  Y K+G     + +  GM     ++ +N++I GY
Sbjct: 202 SLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGY 261

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
           V  G +  AL++  +M S G++ +  T+ S+I A + A ++ LGK+V   +         
Sbjct: 262 VNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDFSFH 321

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF 696
            +  ++++ LY + GK  EA    E MP + D   W ALL+     G+I  A L  +   
Sbjct: 322 FD--NSLVTLYYKCGKFNEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFK--- 375

Query: 697 DLEPGDVLIQRLILQIYAICGKPEDALKV 725
           +++  ++L   +++   A  G  E+ LK+
Sbjct: 376 EMKEKNILSWMIMISGLAENGFGEEGLKL 404


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 227/676 (33%), Positives = 366/676 (54%), Gaps = 23/676 (3%)

Query: 203 VKCGKLIWARRFFESMD-----EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           V+   ++ A+R    MD       D    N ++  Y + G   +A  LFDKM R +    
Sbjct: 33  VRSNDVVQAKRLQTHMDLHLYQPTDTFLQNRLLHLYAKSGNLSDARDLFDKMSRRD---- 88

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           V ++N ++ +Y++ G  +    +  +M       D  ++  +I+GF+ NG +SQAL+ F 
Sbjct: 89  VFSWNAMLSAYSKSGNVEDLRAVFDQMS----VHDAVSYNTVIAGFSGNGCSSQALEFFV 144

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
            M   G      T  S + AC+ L  +  G +IH   V     + V V N+L NMY+KC 
Sbjct: 145 RMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCG 204

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
            L+ A  +FD + +K+V SWNSMI+GY Q G      +LF +MQ S + P+ +T + ++S
Sbjct: 205 ALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILS 264

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
            Y Q G  DEA   F+ + + DKV      W +++ G  Q G++ +AL +FR+M      
Sbjct: 265 AYFQCGYIDEACKTFREIKEKDKV-----CWTTMMVGCAQNGKEEDALLLFREMLLENVR 319

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P+  TI SV+ +CA L +  + + +HG  +   ++  L V ++L+D Y+K G    +  +
Sbjct: 320 PDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIV 379

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           F  M ++++I+WNS+I GY  +G    AL L+++M    LKP+  TF+ ++ A   AG+V
Sbjct: 380 FKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLV 439

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
           + G+  F SI++ + + P  +HYS MI+L GR+G +++A++ I+ M  EP+  IW  LL+
Sbjct: 440 ERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLS 499

Query: 678 ACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNS 737
            CRI+ +++   +A   LF+L+P +     ++  IYA CG+ +D   VR L + N  +  
Sbjct: 500 VCRINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKF 559

Query: 738 FGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--TARSSHSGLCIE---EEEK 792
               WIE+ N V+ FV    + S ++ +Y  L  + + +  +  +  + L +    EEEK
Sbjct: 560 AAYSWIEIDNQVHKFVAEDRTHSETEQIYEELNRLIKKLQESGFTPDTNLVLHDVVEEEK 619

Query: 793 EEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
            +    HSEKLALAF LI        IRI+KNIR+C  CH   K+VS +    I L D  
Sbjct: 620 FDSICYHSEKLALAFWLIKKPHGRTPIRIMKNIRVCGDCHVFMKFVSKIIRRPIILRDIN 679

Query: 853 CLHHFKNGQCSCGDYW 868
             HHF  G+CSC D W
Sbjct: 680 RFHHFIEGRCSCKDSW 695



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 160/507 (31%), Positives = 253/507 (49%), Gaps = 44/507 (8%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKL--HAFLNLVTEIDVFVK 94
           RL EAI  L S  T  ++    +Y  LL  C+ SN +  A++L  H  L+L    D F++
Sbjct: 6   RLREAIDALYSRGTANSE----SYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQ 61

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR-----------DQRW----- 138
            +LL +YAK G L DAR++F+ M  R++++W+AM+ AYS+           DQ       
Sbjct: 62  NRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDAV 121

Query: 139 ---------------REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
                           + +E F  M ++G    D+    +L AC    D + GK +H  +
Sbjct: 122 SYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRI 181

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
           +   +     V N++  +Y KCG L  AR  F+ M  K+ V+WNSMISGY Q G+ +   
Sbjct: 182 VATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCT 241

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
           +LF +M    +    VT + ++ +Y Q G  D A +  + ++      D   WT M+ G 
Sbjct: 242 KLFCEMQSSGLMPDQVTISNILSAYFQCGYIDEACKTFREIKE----KDKVCWTTMMVGC 297

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
           AQNG+   AL LF+EM    V P+  TI+S +S+C  L +L  G  +H  AV  G   D+
Sbjct: 298 AQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDL 357

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
           LV ++L++MYSKC E   A  VF  +  ++V SWNSMI GY Q G   +A  L+ +M   
Sbjct: 358 LVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHE 417

Query: 424 DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
           ++ P+ IT+  ++S  +  G  +     F  + K   +      ++ +I    + G  + 
Sbjct: 418 NLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDK 477

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPAC 510
           A+ + + M    F PNC+   ++L  C
Sbjct: 478 AVDLIKSMT---FEPNCLIWSTLLSVC 501



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 181/441 (41%), Gaps = 110/441 (24%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DV 91
           GNG  ++A+     +  +G +    T++++L AC     I   +++H  + + T +   V
Sbjct: 132 GNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRI-VATSLGESV 190

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV   L ++YAKCG LD AR +F+ M  +N+ +W++MI  Y ++ +     +LF  M   
Sbjct: 191 FVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQPETCTKLFCEMQSS 250

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           GL PD      IL A                                   Y +CG +  A
Sbjct: 251 GLMPDQVTISNILSA-----------------------------------YFQCGYIDEA 275

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS---- 267
            + F  + EKD V W +M+ G  Q G+ ++A  LF +M  E ++    T + ++ S    
Sbjct: 276 CKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARL 335

Query: 268 -------------------------------YNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                                          Y++ G+   A  + KRM    +T +V +W
Sbjct: 336 ASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRM----LTRNVISW 391

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             MI G+AQNG+  +AL L++EM    + P+ +T    +SAC           +H+  V+
Sbjct: 392 NSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSAC-----------MHAGLVE 440

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G              +    ++      FD         ++ MI    +AGY  KA +L
Sbjct: 441 RG-----------QGYFYSISKIHGMNPTFD--------HYSCMINLLGRAGYMDKAVDL 481

Query: 417 FIKMQESDVPPNVITWNVLIS 437
              M      PN + W+ L+S
Sbjct: 482 IKSMT---FEPNCLIWSTLLS 499


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 234/747 (31%), Positives = 374/747 (50%), Gaps = 83/747 (11%)

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH--SLVIKL 186
           I  +S+   +  V+ +F  M+  G+ PD  + P +++ C      + GK MH  +LV  L
Sbjct: 46  IQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGL 105

Query: 187 GMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF 246
           G+                                 D V  +S++  Y Q     +A  +F
Sbjct: 106 GL---------------------------------DSVVLSSLLHMYVQFDHLKDARNVF 132

Query: 247 DKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN 306
           DK+ +     GVVT + LI  + + G+     E+  +   LG+  ++ +W  MISGF ++
Sbjct: 133 DKLPQP----GVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRS 188

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           G    A+ +F+ M   G+ P+G +++S + A  DL    MG++IH   +K G   D  V 
Sbjct: 189 GSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVV 248

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           ++LI+MY KC        VF+ + + DV             G C                
Sbjct: 249 SALIDMYGKCACASEMSGVFNEMDEVDV-------------GAC---------------- 279

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALG 486
                 N L++G  +NG  D A+++F++    D    N  SW S+IA   Q G+   AL 
Sbjct: 280 ------NALVTGLSRNGLVDNALEVFKQFKGMD---LNVVSWTSMIASCSQNGKDMEALE 330

Query: 487 VFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
           +FR+MQ     PN VTI  +LPAC  + A    K  H   LR  + + + V ++LID YA
Sbjct: 331 LFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYA 390

Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
           K G ++ SR  FD M ++++++WNSL+ GY +HG    A+++F+ M+  G KP+  +F  
Sbjct: 391 KCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTC 450

Query: 607 IILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
           ++ A +  G+ + G   F S++  + +   +EHYS M+ L GRSG+LEEA   I+ MP E
Sbjct: 451 VLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFE 510

Query: 667 PDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR 726
           PDS +W ALL++CR+H  +DL  +A +R+F+LEP +     L+  IYA      +   VR
Sbjct: 511 PDSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVR 570

Query: 727 KLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ--NVPENVTARSSHSG 784
            + R    + + G  WIE+KN V+  + G  S      +   L    V    +    H+ 
Sbjct: 571 DMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTD 630

Query: 785 LC---IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMM 841
                +EE++KE+I   HSEKLA+   L+ +++    ++++KN+R+C  CH   K++S  
Sbjct: 631 FVLQDVEEQDKEQILCGHSEKLAVVLGLL-NTKPGFPLQVIKNLRICRDCHAVIKFISDF 689

Query: 842 HHCEIFLADSKCLHHFKNGQCSCGDYW 868
              EIF+ D+   H FK G CSCGDYW
Sbjct: 690 EKREIFVRDTNRFHQFKGGVCSCGDYW 716



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 128/510 (25%), Positives = 226/510 (44%), Gaps = 78/510 (15%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKT 95
               I V   + TQG          +++ C   +++   +++H F  LV+ +  D  V +
Sbjct: 55  FGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFA-LVSGLGLDSVVLS 113

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF--------- 146
            LL +Y +   L DAR VF+ + +  + T SA+I  ++R  R +E  ELF+         
Sbjct: 114 SLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVEL 173

Query: 147 ----------------------LMVQ----DGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
                                 LM Q    +GL PD      +L A G+      G  +H
Sbjct: 174 NLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIH 233

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
             VIK G+   + V ++++ +Y KC         F  MDE D  A N++++G  + G  D
Sbjct: 234 CYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVD 293

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            A  +F +   + + L VV++  +I S +Q G+   A+E+ + M+  G+ P         
Sbjct: 294 NALEVFKQF--KGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKP--------- 342

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
                                     N VTI   + AC ++ AL  G   H  +++ G  
Sbjct: 343 --------------------------NSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIF 376

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
           +DV VG++LI+MY+KC  + A+   FDM+ ++++ SWNS++AGY   G   +A  +F  M
Sbjct: 377 NDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELM 436

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
           Q     P+ +++  ++S   Q G  +E    F  M +N  V+     ++ ++    + G+
Sbjct: 437 QRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGR 496

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
              A  + ++M    F P+     ++L +C
Sbjct: 497 LEEAYAMIKQMP---FEPDSCVWGALLSSC 523



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 168/333 (50%), Gaps = 18/333 (5%)

Query: 76  ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR--ERNLYTWSAMIGAYS 133
           A ++    N + E+DV     L++  ++ G +D+A EVF+  +  + N+ +W++MI + S
Sbjct: 261 ASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCS 320

Query: 134 RDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR 193
           ++ +  E +ELF  M  +G+ P+    P +L ACGN      GK  H   ++ G+     
Sbjct: 321 QNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVY 380

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
           V ++++ +Y KCG+++ +R  F+ M  ++ V+WNS+++GY   G+  EA  +F+ M R  
Sbjct: 381 VGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCG 440

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQA 312
            K   V+F  ++ +  Q G  +        M  + G+   +  ++CM++   ++GR  +A
Sbjct: 441 QKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEA 500

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT-DDVLVGNSLI- 370
             + K+M F    P+     + +S+C     + +G     +A K  F  +    GN ++ 
Sbjct: 501 YAMIKQMPF---EPDSCVWGALLSSCRVHNRVDLG----EIAAKRVFELEPRNPGNYILL 553

Query: 371 -NMYSKCEELEAAERVFDMIKDKDV-----YSW 397
            N+Y+        + V DM++ + +     YSW
Sbjct: 554 SNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSW 586


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 252/870 (28%), Positives = 425/870 (48%), Gaps = 111/870 (12%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
            LL A     ++  AR+L      + E +V     +++ YAK G L DA E+F+ M  R+
Sbjct: 44  TLLHAYFSCGALSDARRL--LRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRD 101

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMH 180
           + +W+ ++  Y + +R+ + +E F  M + G   P+ F F  ++++CG  G  E    + 
Sbjct: 102 VASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLL 161

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
            L  K        V  +++ ++V+CG + +A R F  ++       NSM++GY ++   D
Sbjct: 162 GLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGID 221

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            A   F+ M   +    VV++N++I + +Q G+   A+ +V  M   G+  D  T+    
Sbjct: 222 HAIEYFEDMAERD----VVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTY---- 273

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
                                          TS+++AC  L +L  G ++H+  ++    
Sbjct: 274 -------------------------------TSSLTACARLFSLGWGKQLHAKVIRSLPQ 302

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D  V ++LI +Y+KC   + A+RVF+ ++D++  SW  +I G  Q     K+ ELF +M
Sbjct: 303 IDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQM 362

Query: 421 Q-----------------------------------ESDVPPNVITWNVLISGYIQNGNE 445
           +                                   +S     ++  N LIS Y + G+ 
Sbjct: 363 RAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDL 422

Query: 446 DEAVDLFQRMGKNDKVK--------------------------RNTASWNSLIAGYQQLG 479
             A  +F  M + D V                           RN  +WN+++  Y Q G
Sbjct: 423 QNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLGAYIQHG 482

Query: 480 QKNNALGVFRKMQSSC-FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
            + + L ++  M S     P+ VT +++   CA + A+    +I G  ++  L  ++ V 
Sbjct: 483 AEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVA 542

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           N+ I  Y+K G I  ++ +FD ++ KD+++WN++I GY  HG    A   FD M S G K
Sbjct: 543 NAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAK 602

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           P+  ++++++   S +G+V  GK  F  +T  + I P +EH+S M+DL GR+G L EA +
Sbjct: 603 PDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKD 662

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
            I+ MP++P + +W ALL+AC+IHGN +LA LA + +F+L+  D     L+ +IY+  GK
Sbjct: 663 LIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGK 722

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA 778
            +D+ +VRKL R+   + + G  W+EV+N V+ F     S      + + L  + E +  
Sbjct: 723 SDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKLDELMEKI-- 780

Query: 779 RSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
             +H G    E  + EI   HSEKLA+AF ++ S  A   I I+KN+R+C  CH   K +
Sbjct: 781 --AHLGYVRTESPRSEIH--HSEKLAVAFGIM-SLPAWMPIHIMKNLRICGDCHTVIKLI 835

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S +   E  + D    HHFK+G CSCGDYW
Sbjct: 836 SSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 228/481 (47%), Gaps = 44/481 (9%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           L  +GR+ EA+ ++  +  +G ++   TY + L AC    S+   ++LHA  +  + +ID
Sbjct: 245 LSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQID 304

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            +V + L+ +YAKCG   +A+ VF  +++RN  +W+ +IG   + + + + VELF  M  
Sbjct: 305 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + +  D F    ++  C N  D   G+ +HSL +K G +    V NS++++Y KCG L  
Sbjct: 365 ELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQN 424

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A   F SM E+D V+W SMI+ Y QIG   +A   FD M         +T+N ++ +Y Q
Sbjct: 425 AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRN----AITWNAMLGAYIQ 480

Query: 271 LGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G  +  ++M   M S   +TPD  T+  +  G                           
Sbjct: 481 HGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRG--------------------------- 513

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
                   C D+ A  +G +I    VK G   +V V N+ I MYSKC  +  A+++FD++
Sbjct: 514 --------CADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
             KDV SWN+MI GY Q G   +A + F  M      P+ I++  ++SG   +G   E  
Sbjct: 566 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 625

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
             F  M +   +      ++ ++    + G    A  +  KM      P      ++L A
Sbjct: 626 LYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMP---MKPTAEVWGALLSA 682

Query: 510 C 510
           C
Sbjct: 683 C 683



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 136/566 (24%), Positives = 247/566 (43%), Gaps = 90/566 (15%)

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG 223
           L++CG+ G     + +H  ++ +G++          AV+++                   
Sbjct: 11  LRSCGSRGALAGARALHGRLVTVGLAS---------AVFLQ------------------- 42

Query: 224 VAWNSMISGYFQIGENDEAHRLFDKMCREEIK-LGVVTFNILIRSYNQLGQCDVAMEMVK 282
              N+++  YF  G   +A RL     R +IK   V+T NI++  Y + G    A E+  
Sbjct: 43  ---NTLLHAYFSCGALSDARRLL----RADIKEPNVITHNIMMNGYAKQGSLSDAEELFD 95

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDL 341
           RM       DV +W  ++SG+ Q  R    L+ F  M   G  +PN  T    + +C  L
Sbjct: 96  RMPR----RDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGAL 151

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
               +  ++  L  K  F  D  V  +L++M+ +C  ++ A R+F  I+   ++  NSM+
Sbjct: 152 GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSML 211

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
           AGY +      A E F  M E D    V++WN++I+   Q+G   E              
Sbjct: 212 AGYAKLYGIDHAIEYFEDMAERD----VVSWNMMIAALSQSGRVRE-------------- 253

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
                                 ALG+  +M       +  T  S L ACA L +    K+
Sbjct: 254 ----------------------ALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQ 291

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           +H  V+R   +    V ++LI+ YAK G+   ++ +F+ +  ++ ++W  LI G + +  
Sbjct: 292 LHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYEC 351

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV--FCSITECYQIIPMIEH 639
           +  +++LF+QM++  +  ++    ++I        + LG+++   C  +   + I +   
Sbjct: 352 FSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVV--- 408

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
            +++I LY + G L+ A EF+     E D   W +++TA    GNI   + A E    ++
Sbjct: 409 SNSLISLYAKCGDLQNA-EFVFSSMSERDIVSWTSMITAYSQIGNI---IKAREFFDGMD 464

Query: 700 PGDVLIQRLILQIYAICGKPEDALKV 725
             + +    +L  Y   G  ED LK+
Sbjct: 465 TRNAITWNAMLGAYIQHGAEEDGLKM 490



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 162/357 (45%), Gaps = 29/357 (8%)

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM- 388
            +  A+ +C    ALA    +H   V +G    V + N+L++ Y  C  L  A R+    
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           IK+ +V + N M+ GY + G    A ELF +M   DV     +WN L+SGY Q     + 
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVA----SWNTLMSGYFQARRFLDG 121

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA---LGVFRKMQSSCFY--PNCVTI 503
           ++ F  M ++     N  ++  ++     LG +  A   LG+F K     F+  P+  T 
Sbjct: 122 LETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFD---FWGDPDVETA 178

Query: 504 L-SVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           L  +   C Y+  AS    +I           ++   NS++  YAK   I ++   F+ M
Sbjct: 179 LVDMFVRCGYVDFASRLFSQIE--------RPTIFCRNSMLAGYAKLYGIDHAIEYFEDM 230

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
           + +D+++WN +I      G    AL L  +M   G++ +  T+ S + A +    +  GK
Sbjct: 231 AERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGK 290

Query: 622 KVFCSITECYQIIPMIEHY--SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           ++   +      +P I+ Y  SA+I+LY + G  +EA      +  + +S  W  L+
Sbjct: 291 QLHAKVIRS---LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLI 343


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 251/870 (28%), Positives = 428/870 (49%), Gaps = 111/870 (12%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
            LL A +   ++  AR+L      + E +V     +++ YAK G L DA E+F+ M  R+
Sbjct: 44  TLLHAYLSCGALSDARRL--LRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRD 101

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMH 180
           + +W+ ++  Y + +R+ + +E F  M + G   P+ F F  ++++CG  G  E    + 
Sbjct: 102 VASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLL 161

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
            L  K        V  +++ ++V+CG + +A R F  ++       NSM++GY ++   D
Sbjct: 162 GLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGID 221

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            A   F+ M   +    VV++N++I + +Q G+   A+ +V  M   G+  D  T+    
Sbjct: 222 HAIEYFEDMAERD----VVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTY---- 273

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
                                          TS+++AC  L +L  G ++H+  ++    
Sbjct: 274 -------------------------------TSSLTACARLFSLGWGKQLHAKVIRSLPQ 302

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D  V ++LI +Y+KC   + A+RVF+ ++D++  SW  +I G  Q     K+ ELF +M
Sbjct: 303 IDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQM 362

Query: 421 Q-----------------------------------ESDVPPNVITWNVLISGYIQNGNE 445
           +                                   +S     ++  N LIS Y + G+ 
Sbjct: 363 RAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDL 422

Query: 446 DEAVDLFQRMGKNDKVK--------------------------RNTASWNSLIAGYQQLG 479
             A  +F  M + D V                           RN  +WN+++  Y Q G
Sbjct: 423 QNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHG 482

Query: 480 QKNNALGVFRKMQSSC-FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
            + + L ++  M S     P+ VT +++   CA + A+    +I G  ++  L  ++ V 
Sbjct: 483 AEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVA 542

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           N+ I  Y+K G I  ++ +FD ++ KD+++WN++I GY  HG    A   FD M S G K
Sbjct: 543 NAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAK 602

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           P+  ++++++   S +G+V  GK  F  +T  + I P +EH+S M+DL GR+G L EA +
Sbjct: 603 PDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKD 662

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
            I+ MP++P + +W ALL+AC+IHGN +LA LA + +F+L+  D     L+ +IY+  GK
Sbjct: 663 LIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGK 722

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA 778
            +D+ +VRKL R+   + + G  W+EV+N V+ F     ++  S      ++N  + +  
Sbjct: 723 SDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFK----ADDVSHPQVIAIRNKMDELME 778

Query: 779 RSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
           + +H G    E  + EI   HSEKLA+AF ++ S  A   I I+KN+R+C  CH   K +
Sbjct: 779 KIAHLGYVRTESPRSEIH--HSEKLAVAFGIM-SLPAWMPIHIMKNLRICGDCHTVIKLI 835

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S +   E  + D    HHFK+G CSCGDYW
Sbjct: 836 SSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  209 bits (532), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 228/481 (47%), Gaps = 44/481 (9%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           L  +GR+ EA+ ++  +  +G ++   TY + L AC    S+   ++LHA  +  + +ID
Sbjct: 245 LSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQID 304

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            +V + L+ +YAKCG   +A+ VF  +++RN  +W+ +IG   + + + + VELF  M  
Sbjct: 305 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 364

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + +  D F    ++  C N  D   G+ +HSL +K G +    V NS++++Y KCG L  
Sbjct: 365 ELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQN 424

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A   F SM E+D V+W SMI+ Y QIG   +A   FD M         +T+N ++ +Y Q
Sbjct: 425 AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRN----AITWNAMLGAYIQ 480

Query: 271 LGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G  +  ++M   M S   +TPD  T+  +  G                           
Sbjct: 481 HGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRG--------------------------- 513

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
                   C D+ A  +G +I    VK G   +V V N+ I MYSKC  +  A+++FD++
Sbjct: 514 --------CADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 565

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
             KDV SWN+MI GY Q G   +A + F  M      P+ I++  ++SG   +G   E  
Sbjct: 566 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 625

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
             F  M +   +      ++ ++    + G    A  +  KM      P      ++L A
Sbjct: 626 LYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMP---MKPTAEVWGALLSA 682

Query: 510 C 510
           C
Sbjct: 683 C 683



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 136/566 (24%), Positives = 244/566 (43%), Gaps = 90/566 (15%)

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG 223
           L++CG+ G     + +H  ++ +G++    ++N++L  Y+ CG L  ARR          
Sbjct: 11  LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLL-------- 62

Query: 224 VAWNSMISGYFQIGENDEAHRLFDKMCREEIK-LGVVTFNILIRSYNQLGQCDVAMEMVK 282
                                      R +IK   V+T NI++  Y + G    A E+  
Sbjct: 63  ---------------------------RADIKEPNVITHNIMMNGYAKQGSLSDAEELFD 95

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDL 341
           RM       DV +W  ++SG+ Q  R    L+ F  M   G  +PN  T    + +C  L
Sbjct: 96  RMPR----RDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGAL 151

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
               +  ++  L  K  F  D  V  +L++M+ +C  ++ A R+F  I+   ++  NSM+
Sbjct: 152 GCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSML 211

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
           AGY +      A E F  M E D    V++WN++I+   Q+G   E              
Sbjct: 212 AGYAKLYGIDHAIEYFEDMAERD----VVSWNMMIAALSQSGRVRE-------------- 253

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
                                 ALG+  +M       +  T  S L ACA L +    K+
Sbjct: 254 ----------------------ALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQ 291

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           +H  V+R   +    V ++LI+ YAK G+   ++ +F+ +  ++ ++W  LI G + +  
Sbjct: 292 LHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYEC 351

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV--FCSITECYQIIPMIEH 639
           +  +++LF+QM++  +  ++    ++I        + LG+++   C  +   + I +   
Sbjct: 352 FSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVV--- 408

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
            +++I LY + G L+ A EF+     E D   W +++TA    GNI   + A E    + 
Sbjct: 409 SNSLISLYAKCGDLQNA-EFVFSSMSERDIVSWTSMITAYSQIGNI---IKAREFFDGMA 464

Query: 700 PGDVLIQRLILQIYAICGKPEDALKV 725
             + +    +L  Y   G  ED LK+
Sbjct: 465 TRNAITWNAMLGAYIQHGAEEDGLKM 490



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 162/357 (45%), Gaps = 29/357 (8%)

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM- 388
            +  A+ +C    ALA    +H   V +G    V + N+L++ Y  C  L  A R+    
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           IK+ +V + N M+ GY + G    A ELF +M   DV     +WN L+SGY Q     + 
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVA----SWNTLMSGYFQARRFLDG 121

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA---LGVFRKMQSSCFY--PNCVTI 503
           ++ F  M ++     N  ++  ++     LG +  A   LG+F K     F+  P+  T 
Sbjct: 122 LETFVSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFD---FWGDPDVETA 178

Query: 504 L-SVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           L  +   C Y+  AS    +I           ++   NS++  YAK   I ++   F+ M
Sbjct: 179 LVDMFVRCGYVDFASRLFSQIE--------RPTIFCRNSMLAGYAKLYGIDHAIEYFEDM 230

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
           + +D+++WN +I      G    AL L  +M   G++ +  T+ S + A +    +  GK
Sbjct: 231 AERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGK 290

Query: 622 KVFCSITECYQIIPMIEHY--SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           ++   +      +P I+ Y  SA+I+LY + G  +EA      +  + +S  W  L+
Sbjct: 291 QLHAKVIRS---LPQIDPYVASALIELYAKCGSFKEAKRVFNSLQ-DRNSVSWTVLI 343


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 245/743 (32%), Positives = 371/743 (49%), Gaps = 77/743 (10%)

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
           R+ N++L++ V+ G++  A R F  M E+D  +WN M+ GY ++G  +EA  L+ +M   
Sbjct: 132 RLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWA 191

Query: 253 EIKLGVVTFNILIRS--------------------------------YNQLGQCDVAMEM 280
            ++  V TF  ++R+                                     +C   +  
Sbjct: 192 GMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAA 251

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
            K  + + +T D  +W  MI+G  +N      L+LF  M    V PN +TITS   A   
Sbjct: 252 RKVFDGMAVT-DCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
           L  +    E+H  AVK GF  DV   NSLI MY+    +  A ++F  ++ KD  SW +M
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370

Query: 401 IAGYCQAGYCGKAYELFIKMQESDVPPN-------------------------------- 428
           I+GY + G+  KA E++  M+  +V P+                                
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430

Query: 429 ---VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL 485
              V+  N L+  Y ++ + D+A+++F+ M + D V     SW+S+IAG+    +   AL
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVV-----SWSSMIAGFCFNHRSFEAL 485

Query: 486 GVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
             FR M      PN VT ++ L ACA   A    KEIH  VLR  + S   V N+L+D Y
Sbjct: 486 YYFRYMLGH-VKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLY 544

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
            K G   Y+   F   S KD+++WN ++ G+V HG    AL LF+QM   G  P+  TF+
Sbjct: 545 VKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV 604

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
           +++ A S AGMV  G ++F  +TE + I+P ++HY+ M+DL  R GKL EA   I  MPI
Sbjct: 605 ALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPI 664

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
           +PD+++W ALL  CRIH +++L  LA + + +LEP DV    L+  +Y   GK     +V
Sbjct: 665 KPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARV 724

Query: 726 RKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGL 785
           RK  RE       G  W+EVK + + F+T   S      +   L  + E + A       
Sbjct: 725 RKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVE 784

Query: 786 CIEEEE--KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHH 843
            +E++E  +++I   HSE+LA+AF LI ++    TI + KN   C  CH   K +S +  
Sbjct: 785 SLEDKEVSEDDILCGHSERLAVAFGLINTTPGT-TISVTKNRYTCQSCHVIFKAISEIVR 843

Query: 844 CEIFLADSKCLHHFKNGQCSCGD 866
            EI + D+K LH FK+G CSCGD
Sbjct: 844 REITVRDTKQLHCFKDGDCSCGD 866



 Score =  232 bits (591), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 172/646 (26%), Positives = 309/646 (47%), Gaps = 82/646 (12%)

Query: 25  RDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN 84
           R   L  LC +G+L +A+ +L+S            Y+ L + C    ++    +  A  +
Sbjct: 67  RSAALRALCSHGQLAQALWLLES---SPEPPDEGAYVALFRLCEWRRAVDAGMRACARAD 123

Query: 85  LV-TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
                  + +   +LS+  + G +  A  VF  M ER++++W+ M+G Y +     E ++
Sbjct: 124 AEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALD 183

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           L++ M+  G+ PD + FP +L+ CG   D+  G+ +H+ V++ G      V N+++ +Y 
Sbjct: 184 LYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYA 243

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-- 261
           KCG ++ AR+ F+ M   D ++WN+MI+G+F+  E +    LF  M   E++  ++T   
Sbjct: 244 KCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITS 303

Query: 262 ---------------------------------NILIRSYNQLGQCDVAMEMVKRMESLG 288
                                            N LI+ Y  LG+   A ++  RME   
Sbjct: 304 VTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRME--- 360

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
            T D  +WT MISG+ +NG   +AL+++  M    V P+ VTI SA++AC  L  L +G+
Sbjct: 361 -TKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGI 419

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           ++H LA   GF   V+V N+L+ MY+K + ++ A  VF  + +KDV SW+SMIAG+C   
Sbjct: 420 KLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFC--- 476

Query: 409 YCGKAYE--LFIKMQESDVPPNVITWNVLIS-----GYIQNGNEDEA------------- 448
           +  +++E   + +     V PN +T+   +S     G +++G E  A             
Sbjct: 477 FNHRSFEALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYV 536

Query: 449 ----VDLFQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
               +DL+ + G+            +++  SWN +++G+   G  + AL +F +M     
Sbjct: 537 PNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGE 596

Query: 497 YPNCVTILSVLPACAYLVASNKVKEI-HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
           +P+ VT +++L AC+      +  E+ H    + S+  +L     ++D  ++ G +  + 
Sbjct: 597 HPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAY 656

Query: 556 TIFDGMSSK-DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
            + + M  K D   W +L+ G  +H   H  L          L+PN
Sbjct: 657 NLINRMPIKPDAAVWGALLNGCRIHR--HVELGELAAKVILELEPN 700


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 227/671 (33%), Positives = 347/671 (51%), Gaps = 84/671 (12%)

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           G    A+ + K + +    P+   W  MI G + +     AL+ +  M   G  PN  T 
Sbjct: 76  GDLSYALSLFKTIRN----PNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTF 131

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL------------ 379
            S   +CT ++    G ++H+  +K+G   +  V  SLINMY++  EL            
Sbjct: 132 PSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSM 191

Query: 380 -------------------EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
                              + A  +FD I  +DV SWN+MI+GY Q+G   +A   F +M
Sbjct: 192 RDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEM 251

Query: 421 QESDVPPNVIT-----------------------W-------------NVLISGYIQNGN 444
           + + V PNV T                       W             N LI  Y++ G+
Sbjct: 252 RRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGD 311

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            +EA +LF+++       +N  SWN +I GY  +     ALG+FR+M  S   PN VT L
Sbjct: 312 LEEASNLFEKIQD-----KNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFL 366

Query: 505 SVLPACAYLVASNKVKEIHGCVLR--RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
           S+LPACA L A +  K +H  V +  +S+++++ +  SLID YAK G++  ++ IFD M+
Sbjct: 367 SILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMN 426

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
           +K + TWN++I G+ +HG    AL LF +M S G  P+  TF+ ++ A   AG++ LG++
Sbjct: 427 TKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRR 486

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F S+ + Y++ P + HY  MIDL+GR+G  +EA   +++M ++PD +IW +LL ACRIH
Sbjct: 487 YFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIH 546

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
             I+LA    + LF+LEP +     L+  IYA  G+ ED  K+R    +N  +   G   
Sbjct: 547 RRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSS 606

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISG 797
           IEV ++V+ F+ G      S+ +Y  L  +            +S     ++EE KE +  
Sbjct: 607 IEVDSVVHEFLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLS 666

Query: 798 IHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF 857
            HSEKLA+AF LI S++   TIRI+KN+R+C +CH   K +S + + EI   D    HHF
Sbjct: 667 HHSEKLAIAFGLI-STKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHF 725

Query: 858 KNGQCSCGDYW 868
           K+G CSC DYW
Sbjct: 726 KDGSCSCKDYW 736



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 137/509 (26%), Positives = 229/509 (44%), Gaps = 72/509 (14%)

Query: 105 GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKIL 164
           G L  A  +F+ +R  N   W+ MI   S  +     +E +  M+  G  P+++ FP I 
Sbjct: 76  GDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIF 135

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
           ++C        GK +H+ V+KLG+     V  S++ +Y + G+L+ AR  F+    +D V
Sbjct: 136 KSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAV 195

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           ++ ++I+GY   G  DEA  LFD++   +    VV++N +I  Y Q G+ + AM   + M
Sbjct: 196 SFTALITGYASKGFLDEARELFDEIPVRD----VVSWNAMISGYAQSGRVEEAMAFFEEM 251

Query: 285 ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
               +TP+V T   ++S  AQ+G                                   +L
Sbjct: 252 RRAKVTPNVSTMLSVLSACAQSG----------------------------------SSL 277

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
            +G  + S     G   ++ + N LI+MY KC +LE A  +F+ I+DK+V SWN MI GY
Sbjct: 278 QLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGY 337

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                  +A  LF +M +S++ PN +T+  ++      G  D    +   + KN K  +N
Sbjct: 338 THMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKN 397

Query: 465 T--------------------------------ASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           T                                A+WN++I+G+   G  + ALG+F +M 
Sbjct: 398 TVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMT 457

Query: 493 SSCFYPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
           S  F P+ +T + VL AC +  + S   +     +    +   LP    +ID + ++G  
Sbjct: 458 SEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLF 517

Query: 552 VYSRTIFDGMSSK-DIITWNSLICGYVLH 579
             + T+   M  K D   W SL+    +H
Sbjct: 518 DEAETLVKNMEMKPDGAIWCSLLGACRIH 546



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 155/309 (50%), Gaps = 8/309 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDS-NSIHLARKLHAFL-NLVTEIDVF 92
           +GR+ EA+   + +         +T +++L AC  S +S+ L   + +++ +     ++ 
Sbjct: 238 SGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIR 297

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           +   L+ +Y KCG L++A  +FE ++++N+ +W+ MIG Y+    ++E + LF  M+Q  
Sbjct: 298 LVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSN 357

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK--LGMSCVRRVRNSVLAVYVKCGKLIW 210
           + P+D  F  IL AC N G  + GK +H+ V K    M     +  S++ +Y KCG L  
Sbjct: 358 IDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAV 417

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A+R F+ M+ K    WN+MISG+   G  D A  LF +M  E      +TF  ++ +   
Sbjct: 418 AKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKH 477

Query: 271 LGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G   +       M +   ++P +  + CMI  F + G   +A  L K M    + P+G 
Sbjct: 478 AGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNME---MKPDGA 534

Query: 330 TITSAISAC 338
              S + AC
Sbjct: 535 IWCSLLGAC 543



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 202/477 (42%), Gaps = 69/477 (14%)

Query: 50  TQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKC---- 104
           + G +    T+ ++ ++C      H  +++HA  L L  E + FV T L+++YA+     
Sbjct: 121 SSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELV 180

Query: 105 ---------------------------GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 137
                                      G LD+ARE+F+++  R++ +W+AMI  Y++  R
Sbjct: 181 NARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGR 240

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCG-DFEAGKLMHSLVIKLGMSCVRRVRN 196
             E +  F  M +  + P+      +L AC   G   + G  + S +   G+    R+ N
Sbjct: 241 VEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVN 300

Query: 197 SVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL 256
            ++ +YVKCG L  A   FE + +K+ V+WN MI GY  +    EA  LF +M +  I  
Sbjct: 301 GLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDP 360

Query: 257 GVVTFNILIRSYNQLGQCDVA------------------------MEMVKRMESLGITPD 292
             VTF  ++ +   LG  D+                         ++M  +   L +   
Sbjct: 361 NDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKR 420

Query: 293 VF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
           +F         TW  MISGFA +G T  AL LF  M+  G +P+ +T    ++AC     
Sbjct: 421 IFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGL 480

Query: 344 LAMGMEIHSLAVK-MGFTDDVLVGNSLINMYSKCEELEAAER-VFDMIKDKDVYSWNSMI 401
           L++G    S  ++    +  +     +I+++ +    + AE  V +M    D   W S++
Sbjct: 481 LSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLL 540

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
            G C+     +  E   K      P N   + +L + Y   G  ++   +  R+  N
Sbjct: 541 -GACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDN 596


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 262/895 (29%), Positives = 417/895 (46%), Gaps = 160/895 (17%)

Query: 61  INLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM--R 118
           I  L+ C   NS+  A+ LH   +++  +   + T L+  Y        A  + E +   
Sbjct: 165 ITALKEC---NSLAHAKLLHQ-QSIMQGLLFHLATNLIGTYIASNSTAYAILLLERLPPS 220

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
             +++ W+ +I         R+V  L+  M   G  PD + FP + +AC N      G  
Sbjct: 221 PSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGAS 280

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H+ V + G +    V N+V+++Y KCG L                              
Sbjct: 281 LHATVSRSGFASNVFVCNAVVSMYGKCGAL------------------------------ 310

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
              AH +FD +C   I+                                    D+ +W  
Sbjct: 311 -RHAHNMFDDLCHRGIQ------------------------------------DLVSWNS 333

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVM-PNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           ++S +      + AL LF +M+   +M P+ +++ + + AC  L A   G ++H  +++ 
Sbjct: 334 VVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRS 393

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA---------- 407
           G  DDV VGN++++MY+KC ++E A +VF  +K KDV SWN+M+ GY QA          
Sbjct: 394 GLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLF 453

Query: 408 --------------------GYCGK-----AYELFIKMQESDVPPNVITWNVLIS----- 437
                               GY  +     A ++F +M +    PNV+T   L+S     
Sbjct: 454 ERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSV 513

Query: 438 GYIQNGNEDEA-------------------------VDLFQRMGKNDKVK---------- 462
           G + +G E                            +D++ +    +  +          
Sbjct: 514 GALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKD 573

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKM--QSSCFYPNCVTILSVLPACAYLVASNKVK 520
           R+  +W  +I GY Q G  NNAL +F  M        PN  T+   L ACA L A    +
Sbjct: 574 RDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGR 633

Query: 521 EIHGCVLRRSLESS-LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
           ++H  VLR    S  L V N LID Y+KSG++  ++ +FD M  ++ ++W SL+ GY +H
Sbjct: 634 QVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMH 693

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
           G    AL +FD+M+   L P+  TFL ++ A S +GMVD G   F  +++ + + P  EH
Sbjct: 694 GRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEH 753

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
           Y+ M+DL+GR+G+L EAM+ I +MP+EP   +W ALL+ACR+H N++L   A  RL +LE
Sbjct: 754 YACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELE 813

Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSE 759
            G+     L+  IYA   + +D  ++R   +    +   G  WI+ +  V TF  G  S 
Sbjct: 814 SGNDGSYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSH 873

Query: 760 SYSDLLYSWLQNVPENVTA-----RSSHSGLCIEEEEKEEISGIHSEKLALAFALIG-SS 813
             S  +Y  L ++ + + A     ++S +   +++EEK ++   HSEKLALA+ ++    
Sbjct: 874 PQSQQIYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHP 933

Query: 814 QAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +AP  IRI KN+R+C  CH    Y+S +   EI L DS   HHFKNG CSC  YW
Sbjct: 934 RAP--IRITKNLRICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 159/530 (30%), Positives = 242/530 (45%), Gaps = 93/530 (17%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           G   +  T+   + + G      T+  + +AC + +S+ L   LHA ++      +VFV 
Sbjct: 238 GSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVC 297

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRER---NLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
             ++S+Y KCG L  A  +F+D+  R   +L +W++++ AY         + LF  M   
Sbjct: 298 NAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTR 357

Query: 152 GLF-PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            L  PD      IL AC +      G+ +H   I+ G+     V N+V+ +Y KCGK+  
Sbjct: 358 HLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEE 417

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A + F+ M  KD V+WN+M++GY Q G  + A  LF++M  E I+L VVT+  +I  Y Q
Sbjct: 418 ANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQ 477

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            GQ   A+++ ++M   G  P+V                                   VT
Sbjct: 478 RGQGCEALDVFRQMCDCGSRPNV-----------------------------------VT 502

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGF--------TDDVLVGNSLINMYSKCEELEAA 382
           + S +SAC  + AL  G E H  A+K            DD+ V N LI+MY+KC+  E A
Sbjct: 503 LVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVA 562

Query: 383 ERVFDMI--KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD--VPPNVITW------ 432
            ++FD +  KD+DV +W  MI GY Q G    A +LF  M + D  + PN  T       
Sbjct: 563 RKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVA 622

Query: 433 ------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                         N LI  Y ++G+ D A  +F  M      +
Sbjct: 623 CARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMP-----Q 677

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
           RN  SW SL+ GY   G+  +AL VF +M+     P+ +T L VL AC++
Sbjct: 678 RNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSH 727



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 161/318 (50%), Gaps = 18/318 (5%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-----LNL----V 86
           G+  EA+ V   +   G++    T ++LL AC+   ++   ++ H +     LNL     
Sbjct: 479 GQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDP 538

Query: 87  TEIDVFVKTKLLSVYAKCGCLDDAREVFEDM--RERNLYTWSAMIGAYSRDQRWREVVEL 144
              D+ V   L+ +YAKC   + AR++F+ +  ++R++ TW+ MIG Y++       ++L
Sbjct: 539 GADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQL 598

Query: 145 FFLMVQ--DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK-LGMSCVRRVRNSVLAV 201
           F  M +    + P+DF     L AC        G+ +H+ V++    S +  V N ++ +
Sbjct: 599 FSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDM 658

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           Y K G +  A+  F++M +++ V+W S+++GY   G  ++A R+FD+M +  +    +TF
Sbjct: 659 YSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITF 718

Query: 262 NILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
            +++ + +  G  D  +    RM +  G+ P    + CM+  + + GR  +A+ L  EM 
Sbjct: 719 LVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMP 778

Query: 321 FVGVMPNGVTITSAISAC 338
              + P  V   + +SAC
Sbjct: 779 ---MEPTPVVWVALLSAC 793


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 215/590 (36%), Positives = 325/590 (55%), Gaps = 26/590 (4%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP-NGVTITSAISACTDLKALAMGM 348
           +PD F W  MI  +  +    +++ LF +M     +P +  +++  I AC  LK    G 
Sbjct: 66  SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQ 125

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           ++H+  +K+G   D+ V  +LI MY+K  ++E A  + D +   D+  +N ++A Y + G
Sbjct: 126 KLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVG 185

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
               A++LF +M E D+    ++WN +I G+   G+   A  LF R       +R+  SW
Sbjct: 186 EINLAHDLFDRMPERDL----VSWNTMIHGHASLGDVGTAKKLFDR-----TCERDLISW 236

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           +S+IA Y +  Q N AL +F +MQ +   P+ VT++SVL AC  + A    K IH C+ R
Sbjct: 237 SSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIER 296

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
             +E  L +  SL+D YAK G+I  S  +F+GM+++D+  W+++I G   HGF   ALD 
Sbjct: 297 NRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDH 356

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F +M S  +KPN  TF+ ++ A S  G+VD G   F S+++ Y + P IEHY  ++D+ G
Sbjct: 357 FSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILG 416

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+G+L+EAME I+ MP  PD+ +W ALL ACRI+ N+++A  A   L +LEP       L
Sbjct: 417 RAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEPHVDGNYVL 476

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  IY+   + +  + VR++ +    +   G   IEV N V+ FV G  S   S  +   
Sbjct: 477 LSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVHEFVAGDQSHPESKKILRM 536

Query: 769 LQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAP-HT 818
           L      +TAR   +G            +E+EKE     HSEKLA+AF L+  S AP  T
Sbjct: 537 LS----EITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAIAFGLL--STAPGST 590

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IRIVKN+R+C  CH   K +S  +   I + D    HHF NG CSC DYW
Sbjct: 591 IRIVKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKDYW 640



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 236/456 (51%), Gaps = 21/456 (4%)

Query: 61  INLLQACIDSNSIHLARKLHAFLNLVTEID--VFVKTKLLSVYAKCGCLDD---AREVFE 115
           ++LLQ     N I    ++HA + + T +D   FV  KLL     C   +D   AR VF+
Sbjct: 7   MSLLQNATKLNQI---IQIHALI-IKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFD 62

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP-DDFLFPKILQACGNCGDFE 174
           ++   + + W+ MI AY   Q  +E + LFF M      P D +    ++QACG   D  
Sbjct: 63  EIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPG 122

Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
            G+ +H+ V+K+G+     V  +++ +Y K G +  AR   + M   D V +N +++ Y 
Sbjct: 123 NGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYV 182

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
           ++GE + AH LFD+M   ++    V++N +I  +  LG    A ++  R        D+ 
Sbjct: 183 RVGEINLAHDLFDRMPERDL----VSWNTMIHGHASLGDVGTAKKLFDRT----CERDLI 234

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +W+ MI+ +A+  ++++AL LF EM    V+P+ VT+ S +SAC D+ AL MG  IH   
Sbjct: 235 SWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECI 294

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
            +     D+ +G SL++MY+KC +++ + RVF+ + ++DV++W++MI G    G+   A 
Sbjct: 295 ERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELAL 354

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
           + F KM   D+ PN +T+  ++S     G  DE    F  M K   V      +  ++  
Sbjct: 355 DHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDI 414

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             + G+   A+ + + M    F P+ +   ++L AC
Sbjct: 415 LGRAGRLQEAMELIKSMP---FAPDAIVWRALLGAC 447



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 165/338 (48%), Gaps = 12/338 (3%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
           Y  LL   +    I+LA   H   + + E D+     ++  +A  G +  A+++F+   E
Sbjct: 174 YNVLLAEYVRVGEINLA---HDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCE 230

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           R+L +WS+MI AY++ ++  E + LF  M    + PD      +L ACG+ G    GK++
Sbjct: 231 RDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMI 290

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H  + +  +    ++  S++ +Y KCG +  + R F  M+ +D  AW++MI G    G  
Sbjct: 291 HECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFG 350

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTC 298
           + A   F KM  E+IK   VTF  ++ + + +G  D        M  +  ++P +  + C
Sbjct: 351 ELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGC 410

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           ++    + GR  +A++L K M F    P+ +   + + AC   K + +  E     V + 
Sbjct: 411 VVDILGRAGRLQEAMELIKSMPFA---PDAIVWRALLGACRIYKNVEIAEEA---TVNLL 464

Query: 359 FTDDVLVGNSLI--NMYSKCEELEAAERVFDMIKDKDV 394
             +  + GN ++  N+YS+ +E +    V  M+K+ ++
Sbjct: 465 ELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINI 502



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 4/206 (1%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL-VTEIDVFVKTKL 97
           NEA+ +   +        + T +++L AC D  ++ + + +H  +     EID+ + T L
Sbjct: 250 NEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSL 309

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           + +YAKCG +D++  VF  M  R+++ WSAMI   +        ++ F  M+ + + P+D
Sbjct: 310 VDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPND 369

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKL-GMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
             F  +L AC + G  + G    + + K+  +S        V+ +  + G+L  A    +
Sbjct: 370 VTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIK 429

Query: 217 SMD-EKDGVAWNSMISGYFQIGENDE 241
           SM    D + W +++ G  +I +N E
Sbjct: 430 SMPFAPDAIVWRALL-GACRIYKNVE 454



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 36/201 (17%)

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTY---AKSGNIVYSRTIFDGMSSKDIITWNSLI 573
           N++ +IH  +++ SL+ +  V+  L+      + + +++Y+R++FD + S D   WN++I
Sbjct: 17  NQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMI 76

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA--------------HSLAGMVDL 619
             Y+       ++ LF QM+     P     LS+++               H+    + L
Sbjct: 77  RAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGL 136

Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
           G  +F                +A+I++Y + G +E A   +++M   PD   +  LL   
Sbjct: 137 GSDLFVE--------------TALIEMYAKFGDIEIARNILDEMA-HPDLVPYNVLLAEY 181

Query: 680 RIHGNIDLAVLAIERLFDLEP 700
              G I+LA      LFD  P
Sbjct: 182 VRVGEINLA----HDLFDRMP 198


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 240/790 (30%), Positives = 387/790 (48%), Gaps = 93/790 (11%)

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
           Y +S++I  +S      + + +F  ++  G  PD+F FP +L AC        G  +H  
Sbjct: 105 YMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGA 164

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           ++K+G      V NS++  Y +CG++   RR F+ M E++ V+W S+I GY + G   EA
Sbjct: 165 IVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEA 224

Query: 243 HRLFDKMCREEIKLGVVTF-----------------------------------NILIRS 267
             LF +M    I+   VT                                    N L+  
Sbjct: 225 VSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDM 284

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           Y + G  D A ++        +  ++  +  ++S + + G   + L +  EM   G  P+
Sbjct: 285 YMKCGAIDKARKIFDEC----VDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPD 340

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            +T+ SA+SAC++L  ++ G   H   ++ G      V N++INMY KC + E A RVFD
Sbjct: 341 RITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFD 400

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
            + +K                                     ++WN LI+G+++NG+ + 
Sbjct: 401 RMLNK-----------------------------------TRVSWNSLIAGFVRNGDMES 425

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           A  +F  M  +D V     SWN++I    Q      A+ +FR MQS     + VT++ V 
Sbjct: 426 AWKIFSAMPDSDLV-----SWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVA 480

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
            AC YL A +  K IHG + ++ +   + +  +L+D +A+ G+   +  +F+ M  +D+ 
Sbjct: 481 SACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVS 540

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
            W + I    + G    A++LFD+M   G+KP+   F++++ A S  G+V+ G  +F S+
Sbjct: 541 AWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSM 600

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
            + Y I P   HY  M+DL GR+G L EA+  I  M +EP+  IW +LL ACR+H N+D+
Sbjct: 601 KDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDI 660

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
           A  A ER+ +L+P    I  L+  IYA  G+ +D  KVR   +E       G   IE+  
Sbjct: 661 AAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSIEING 720

Query: 748 LVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSG---------LCIEEEEKEEISGI 798
            ++ F TG   ES+ ++ +  ++ + + +  R    G         L + E+EKE +   
Sbjct: 721 KIFEFTTG--DESHPEMTH--IEPMLKEICCRLRDIGYVPDLTNVLLDVNEKEKEYLLSR 776

Query: 799 HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
           HSEKLA+AFALI + Q    IR+ KN+R+C  CH  AK VS  +  EI + D+   H F+
Sbjct: 777 HSEKLAIAFALISTGQG-MPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQ 835

Query: 859 NGQCSCGDYW 868
            G CSCGDYW
Sbjct: 836 QGFCSCGDYW 845



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 248/524 (47%), Gaps = 75/524 (14%)

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKR-----MESLGITPDVFT 295
           E  +L  ++ +  +    ++   LI S  ++G  + ++E  ++     +E  GI    + 
Sbjct: 48  ELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFE-SLEYAQKALELFIEDNGIMGTHYM 106

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           ++ +I GF+  G   +A+ +F+++  +G +P+  T    +SACT   AL  G ++H   V
Sbjct: 107 FSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIV 166

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           KMGF  D+ V NSLI+ Y +C E++   RVFD + +++V SW S+I GY + G   +A  
Sbjct: 167 KMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVS 226

Query: 416 LFIKMQESDVPPNVITWNVLISGY-----IQNGNE-----------------DEAVDLFQ 453
           LF +M E  + PN +T   +IS       +Q G +                 +  VD++ 
Sbjct: 227 LFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYM 286

Query: 454 RMGKNDK--------VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           + G  DK        V +N   +N++++ Y + G     L V  +M      P+ +T+LS
Sbjct: 287 KCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLS 346

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
            + AC+ L   +  K  HG VLR  LE    V N++I+ Y K G    +  +FD M +K 
Sbjct: 347 AVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKT 406

Query: 566 IITWNSLICGYVLHG-------------------------------FWHAALDLFDQMKS 594
            ++WNSLI G+V +G                                +  A++LF  M+S
Sbjct: 407 RVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQS 466

Query: 595 FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY-SAMIDLYGRSGKL 653
            G+  ++ T + +  A    G +DL K +   I +  + I    H  +A++D++ R G  
Sbjct: 467 EGITADKVTMVGVASACGYLGALDLAKWIHGYIKK--KDIHFDMHLGTALVDMFARCGDP 524

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
           + AM+    M ++ D S W A + A  + GN      AIE LFD
Sbjct: 525 QSAMQVFNKM-VKRDVSAWTAAIGAMAMEGN---GTGAIE-LFD 563



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/541 (24%), Positives = 242/541 (44%), Gaps = 68/541 (12%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDV 91
           CG G   +AI V   +   GA     T+  +L AC  S ++    ++H A + +  E D+
Sbjct: 117 CGLGY--KAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDM 174

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV+  L+  Y +CG +D  R VF+ M ERN+ +W+++IG Y++   ++E V LFF MV+ 
Sbjct: 175 FVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEV 234

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+ P+      ++ AC    D + G+ + + + +L +     + N+++ +Y+KCG +  A
Sbjct: 235 GIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKA 294

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------- 261
           R+ F+   +K+ V +N+++S Y + G   E   +  +M +   +   +T           
Sbjct: 295 RKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSEL 354

Query: 262 -------------------------NILIRSYNQLGQCDVAMEMVKRM------------ 284
                                    N +I  Y + G+ ++A  +  RM            
Sbjct: 355 DDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLI 414

Query: 285 -------------ESLGITP--DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
                        +     P  D+ +W  MI    Q     +A++LF+ M   G+  + V
Sbjct: 415 AGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKV 474

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           T+    SAC  L AL +   IH    K     D+ +G +L++M+++C + ++A +VF+ +
Sbjct: 475 TMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKM 534

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
             +DV +W + I      G    A ELF +M +  + P+ + +  L++     G  ++  
Sbjct: 535 VKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGW 594

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
            +F+ M     +      +  ++    + G  + AL +   MQ     PN V   S+L A
Sbjct: 595 HIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQ---MEPNDVIWGSLLAA 651

Query: 510 C 510
           C
Sbjct: 652 C 652



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 99/210 (47%), Gaps = 3/210 (1%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +  L       EAI +   + ++G    + T + +  AC    ++ LA+ +H ++  
Sbjct: 442 NTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKK 501

Query: 86  V-TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
                D+ + T L+ ++A+CG    A +VF  M +R++  W+A IGA + +      +EL
Sbjct: 502 KDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIEL 561

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           F  M+Q G+ PD  +F  +L A  + G  E G  +  S+    G++        ++ +  
Sbjct: 562 FDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLG 621

Query: 204 KCGKLIWARRFFESMD-EKDGVAWNSMISG 232
           + G L  A     SM  E + V W S+++ 
Sbjct: 622 RAGLLSEALSLINSMQMEPNDVIWGSLLAA 651


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 246/763 (32%), Positives = 388/763 (50%), Gaps = 54/763 (7%)

Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF-LMVQDGLFPDDFLFPKILQACG-NC 170
           +F  +R  N +TW+ ++ A+   Q       L + L +     PD + +P +LQ C    
Sbjct: 60  IFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARV 119

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
            +FE G+ +H+  +  G      VRN+++ +Y  CG +  ARR FE     D V+WN+++
Sbjct: 120 SEFE-GRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLL 178

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT 290
           +GY Q GE +EA R+F+ M         +  N +I  + + G  + A  +   +   G  
Sbjct: 179 AGYVQAGEVEEAERVFEGMPERN----TIASNSMIALFGRKGCVEKARRIFNGVR--GRE 232

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
            D+ +W+ M+S + QN    +AL LF EM   GV  + V + SA+SAC+ +  + MG  +
Sbjct: 233 RDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWV 292

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H LAVK+G  D V + N+LI++YS C E+  A R+FD                       
Sbjct: 293 HGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFD----------------------- 329

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
               EL           ++I+WN +ISGY++ G+  +A  LF  M + D V     SW++
Sbjct: 330 -DGGELL----------DLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVV-----SWSA 373

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +I+GY Q    + AL +F++MQ     P+   ++S + AC +L   +  K IH  + R  
Sbjct: 374 MISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNK 433

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           L+ ++ +  +LID Y K G +  +  +F  M  K + TWN++I G  ++G    +L++F 
Sbjct: 434 LQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFA 493

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
            MK  G  PN  TF+ ++ A    G+V+ G+  F S+   ++I   I+HY  M+DL GR+
Sbjct: 494 DMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRA 553

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           G L+EA E I+ MP+ PD + W ALL ACR H + ++      +L  L+P       L+ 
Sbjct: 554 GLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFHVLLS 613

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ 770
            IYA  G   + L++R +  ++    + G   IE    V+ F+ G  +    + +   L 
Sbjct: 614 NIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINDIEHMLD 673

Query: 771 NVP-----ENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNI 825
            V      E     +S   L I+EEEKE     HSEKLA+AF LI  S  P  IR+ KN+
Sbjct: 674 VVAAKLKIEGYVPTTSEVSLDIDEEEKETALFRHSEKLAVAFGLITIS-PPTPIRVTKNL 732

Query: 826 RMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           R+C  CH   K +S     +I + D    HHFK+G CSC D+W
Sbjct: 733 RICNDCHTVVKLISKAFDRDIVVRDRHRFHHFKHGACSCMDFW 775



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 203/428 (47%), Gaps = 45/428 (10%)

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR--ERNLYTWSAMIGAYSRDQRWREVVE 143
           + E +      +++++ + GC++ AR +F  +R  ER++ +WSAM+  Y +++   E + 
Sbjct: 197 MPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALV 256

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           LF  M   G+  D+ +    L AC    + E G+ +H L +K+G+     ++N+++ +Y 
Sbjct: 257 LFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYS 316

Query: 204 KCGKLIWARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
            CG+++ ARR F+   E  D ++WNSMISGY + G   +A  LF  M  ++    VV+++
Sbjct: 317 SCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKD----VVSWS 372

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            +I  Y Q      A+ + + M+  G+ PD                              
Sbjct: 373 AMISGYAQHECFSEALALFQEMQLHGVRPD------------------------------ 402

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
                   + SAISACT L  L +G  IH+   +     +V++  +LI+MY KC  +E A
Sbjct: 403 -----ETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENA 457

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
             VF  +++K V +WN++I G    G   ++  +F  M+++   PN IT+  ++      
Sbjct: 458 LEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHM 517

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G  ++    F  M    K++ N   +  ++    + G    A  +   M  +   P+  T
Sbjct: 518 GLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMA---PDVAT 574

Query: 503 ILSVLPAC 510
             ++L AC
Sbjct: 575 WGALLGAC 582



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/292 (23%), Positives = 134/292 (45%), Gaps = 9/292 (3%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           +N  I+L  +C     I  AR++  F +    +D+     ++S Y +CG + DA  +F  
Sbjct: 308 KNALIHLYSSC---GEIVDARRI--FDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYS 362

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M E+++ +WSAMI  Y++ + + E + LF  M   G+ PD+      + AC +    + G
Sbjct: 363 MPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLG 422

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           K +H+ + +  +     +  +++ +Y+KCG +  A   F +M+EK    WN++I G    
Sbjct: 423 KWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMN 482

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFT 295
           G  +++  +F  M +       +TF  ++ +   +G  +        M     I  ++  
Sbjct: 483 GSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKH 542

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
           + CM+    + G   +A +L   M      P+  T  + + AC   +   MG
Sbjct: 543 YGCMVDLLGRAGLLKEAEELIDSMPMA---PDVATWGALLGACRKHRDNEMG 591



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 106/215 (49%), Gaps = 3/215 (1%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL-VTEIDVFVKTK 96
            +EA+ +   +   G +      ++ + AC    ++ L + +HA+++    +++V + T 
Sbjct: 384 FSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTT 443

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+ +Y KCGC+++A EVF  M E+ + TW+A+I   + +    + + +F  M + G  P+
Sbjct: 444 LIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSLNMFADMKKTGTVPN 503

Query: 157 DFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           +  F  +L AC + G    G+   +S++ +  +    +    ++ +  + G L  A    
Sbjct: 504 EITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAEELI 563

Query: 216 ESMDEKDGVA-WNSMISGYFQIGENDEAHRLFDKM 249
           +SM     VA W +++    +  +N+   RL  K+
Sbjct: 564 DSMPMAPDVATWGALLGACRKHRDNEMGERLGRKL 598



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 74/366 (20%), Positives = 141/366 (38%), Gaps = 82/366 (22%)

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEEL---EAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           S  +  G   D    + LIN  S    L     + R+F+ +++ + ++WN+++  +    
Sbjct: 24  SQTILTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTFTWNTIMRAHLYLQ 83

Query: 409 YCGKA----YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA---------------- 448
                    Y+LF+    S   P+  T+ +L+       +E E                 
Sbjct: 84  NSPHQALLHYKLFLA---SHAKPDSYTYPILLQCCAARVSEFEGRQLHAHAVSSGFDGDV 140

Query: 449 ------VDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
                 ++L+   G     +R        +  SWN+L+AGY Q G+   A  VF  M   
Sbjct: 141 YVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGYVQAGEVEEAERVFEGM--- 197

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              P   TI S                                 NS+I  + + G +  +
Sbjct: 198 ---PERNTIAS---------------------------------NSMIALFGRKGCVEKA 221

Query: 555 RTIFDGMSS--KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
           R IF+G+    +D+++W++++  Y  +     AL LF +MK  G+  +    +S + A S
Sbjct: 222 RRIFNGVRGRERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACS 281

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
               V++G+ V   +     +   +   +A+I LY   G++ +A    +D     D   W
Sbjct: 282 RVLNVEMGRWVH-GLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISW 340

Query: 673 EALLTA 678
            ++++ 
Sbjct: 341 NSMISG 346


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 242/745 (32%), Positives = 391/745 (52%), Gaps = 68/745 (9%)

Query: 136 QRWREVVELFFLMVQDGL--FPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVR 192
           Q+  + ++L +     GL  F D   + +++  C    DF +A +L   + + L      
Sbjct: 5   QKLHQAIDLLY---SHGLASFDD---YTRLVLHCARANDFIQAKRLQSHMELNLFQPKDS 58

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC-R 251
            + N +L +Y K GKL  A+  F++M ++D  +WN+++S Y ++G  +  H +FD+M  R
Sbjct: 59  FIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYR 118

Query: 252 EEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQ 311
           + +            SYN L  C                            FA NG + +
Sbjct: 119 DSV------------SYNTLIAC----------------------------FASNGHSGK 138

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           AL +   M   G  P   +  +A+ AC+ L  L  G +IH   V     ++  V N++ +
Sbjct: 139 ALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTD 198

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MY+KC +++ A  +FD + DK+V SWN MI+GY + G   +   LF +MQ S + P+++T
Sbjct: 199 MYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVT 258

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            + +++ Y + G  D+A +LF ++ K D++      W ++I GY Q G++ +A  +F  M
Sbjct: 259 VSNVLNAYFRCGRVDDARNLFIKLPKKDEI-----CWTTMIVGYAQNGREEDAWMLFGDM 313

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
                 P+  TI S++ +CA L +    + +HG V+   +++S+ V ++L+D Y K G  
Sbjct: 314 LRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVT 373

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
           + +R IF+ M  +++ITWN++I GY  +G    AL L+++M+    KP+  TF+ ++ A 
Sbjct: 374 LDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSAC 433

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
             A MV  G+K F SI+E + I P ++HY+ MI L GRSG +++A++ I+ MP EP+  I
Sbjct: 434 INADMVKEGQKYFDSISE-HGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRI 492

Query: 672 WEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
           W  LL+ C   G++  A LA   LF+L+P +     ++  +YA CG+ +D   VR L +E
Sbjct: 493 WSTLLSVC-AKGDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKE 551

Query: 732 NTRRNSFGQCWIEVKNLVYTFVTGGW-----SESYSDL--LYSWLQNVPENV-TARSSHS 783
              +      W+EV N V+ FV+         + Y +L  L S LQ +  N  T    H+
Sbjct: 552 KNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIGYNPDTNIVLHN 611

Query: 784 GLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHH 843
              + EEEK      HSEKLALAFALI        IRI+KNIR+C  CH   K+ S+   
Sbjct: 612 ---VGEEEKFRSISYHSEKLALAFALIRKPNGVAPIRIIKNIRVCDDCHVFMKFASITIS 668

Query: 844 CEIFLADSKCLHHFKNGQCSCGDYW 868
             I + DS   HHF  G+CSC D W
Sbjct: 669 RPIIMRDSNRFHHFFGGKCSCNDNW 693



 Score =  220 bits (561), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 240/482 (49%), Gaps = 38/482 (7%)

Query: 58  NTYINLLQACIDSNSIHLARKL--HAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           + Y  L+  C  +N    A++L  H  LNL    D F+  +LL +YAK G L DA+ VF+
Sbjct: 23  DDYTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAKFGKLSDAQNVFD 82

Query: 116 DMRERNLYTWSAMIGAYSR-----------DQ-RWREVV-------------------EL 144
           +M +R++Y+W+ ++ AY++           DQ  +R+ V                   ++
Sbjct: 83  NMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKV 142

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
              M +DG  P  +     LQAC    D   GK +H  ++   +     VRN++  +Y K
Sbjct: 143 LVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAK 202

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
           CG +  AR  F+ M +K+ V+WN MISGY ++G  +E   LF++M    +K  +VT + +
Sbjct: 203 CGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQLSGLKPDLVTVSNV 262

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
           + +Y + G+ D A  +  ++       D   WT MI G+AQNGR   A  LF +M    V
Sbjct: 263 LNAYFRCGRVDDARNLFIKLPK----KDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNV 318

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            P+  TI+S +S+C  L +L  G  +H   V MG  + +LV ++L++MY KC     A  
Sbjct: 319 KPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARV 378

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           +F+ +  ++V +WN+MI GY Q G   +A  L+ +MQ+ +  P+ IT+  ++S  I    
Sbjct: 379 IFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADM 438

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
             E    F  + ++  +      +  +I    + G  + A+ + + M     Y    T+L
Sbjct: 439 VKEGQKYFDSISEHG-IAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLL 497

Query: 505 SV 506
           SV
Sbjct: 498 SV 499



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 150/352 (42%), Gaps = 71/352 (20%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-- 89
              NG   +A+ VL  +   G +  + +++N LQAC     +   +++H  + +V ++  
Sbjct: 130 FASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRI-VVADLGE 188

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           + FV+  +  +YAKCG +D AR +F+ M ++N+ +W+ MI  Y +     E + LF  M 
Sbjct: 189 NTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEMQ 248

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             GL PD      +L A                                   Y +CG++ 
Sbjct: 249 LSGLKPDLVTVSNVLNA-----------------------------------YFRCGRVD 273

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            AR  F  + +KD + W +MI GY Q G  ++A  LF  M R  +K    T + ++ S  
Sbjct: 274 DARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCA 333

Query: 270 QLG--------------------------------QCDVAMEMVKRMESLGITPDVFTWT 297
           +L                                 +C V ++     E++ I  +V TW 
Sbjct: 334 KLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIR-NVITWN 392

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            MI G+AQNG+  +AL L++ M      P+ +T    +SAC +   +  G +
Sbjct: 393 AMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQK 444


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 264/921 (28%), Positives = 432/921 (46%), Gaps = 102/921 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG   EA+ +   +  +G +  +  ++  L AC  S  +   R++H+  +      ++ +
Sbjct: 36  NGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSGLTSNIII 95

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+++Y KC  +  A +VF+ M  R++ +W+AM+  Y+++  W + +E    M  +G+
Sbjct: 96  SNSLVNMYGKCQDVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGV 155

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+   F  I+  C      + G+ +H  +I  G+     + N+++ +Y  CG     + 
Sbjct: 156 KPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKS 215

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------ 261
            F  M +   + W +MI+G  Q G+ +E   +F KM  E +K   VT+            
Sbjct: 216 VFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDA 275

Query: 262 -----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
                                    LI  Y Q G  D A  +++ M       DV  W  
Sbjct: 276 VKEGEMIDARILESPFCSSTLLATSLISLYGQCGILDRAKGLLEHM----YQRDVVAWNA 331

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           M++  AQNG   +A+ L + M   G   N VT  S + AC +L+AL+ G EIH+  +  G
Sbjct: 332 MVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCG 391

Query: 359 FTD-DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
               +V VGNS+I MY KC + EAA  VF+ +  KD  SWN++I           A ELF
Sbjct: 392 LLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELF 451

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNED-------------------------EAVDLF 452
             M+   +  N  T   L+      G ED                           V+++
Sbjct: 452 HGMELEGLRSNEFTLLSLLEAC--GGLEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMY 509

Query: 453 QRMGK--------NDKVKRNTASWNSLIAGYQQL--GQKNNALGVFRKMQSSCFYPNCVT 502
            R G         +   ++   +W+ ++A Y Q   G    A   F++M++    P  VT
Sbjct: 510 ARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVT 569

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRS-----LESSLPVMNSLIDTYAKSGNIVYSRTI 557
            +S L ACA +      + +H    RR+     +E+SL + N++I+ Y K G+   ++ +
Sbjct: 570 FVSALDACAAMATLEHGRSMH----RRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLV 625

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           FD M  K +I+WNSLI  Y  +G    AL    +M   G  P+ GT +SI+   S AG++
Sbjct: 626 FDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGLSHAGLL 685

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI-EPDSSIWEALL 676
           + G + F S  + + + P       ++DL  R G L+ A E I   P  + D+  W  LL
Sbjct: 686 ERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADTIAWMTLL 745

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
            AC+ +G+    +   ER+F+LEP       ++  +YA  G+  DA ++RK+    + + 
Sbjct: 746 AACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMMERMSVKK 805

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------I 787
             G  WIE+   V+ F++G   ES    +    +++ E +T R   +G           +
Sbjct: 806 EPGCSWIELSGSVHEFISG---ESKHPKIREICEDL-EKLTLRMREAGYVPDTTNVVHDV 861

Query: 788 EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIF 847
           EE +KEEI   HSE+LA+ F L+ S++   TIR+VKN+R+C  CH   K +S +   EI 
Sbjct: 862 EEGDKEEILSRHSERLAIVFGLM-STRPGETIRVVKNLRVCSDCHAATKIISSVVGREIV 920

Query: 848 LADSKCLHHFKNGQCSCGDYW 868
           + DS   HHFK+GQCSCGD+W
Sbjct: 921 VRDSSRFHHFKHGQCSCGDFW 941



 Score =  238 bits (608), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 171/676 (25%), Positives = 312/676 (46%), Gaps = 80/676 (11%)

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +Y KC  + DA  VF+ +  +N+++W+ M+ AYS++  +RE +ELF  M  +G  PD  +
Sbjct: 1   MYGKCARVTDALMVFDGISAKNVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKVV 60

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           F   L AC   G+ + G+ +HS V+  G++    + NS++ +Y KC  +  A + F+ M 
Sbjct: 61  FVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVFDGML 120

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
            +D V+W +M++ Y Q G   +A     +M  E +K   VTF  ++    +L   D+  +
Sbjct: 121 LRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRK 180

Query: 280 MVKRMESLGITPD-------------------------------VFTWTCMISGFAQNGR 308
           +  R+ + G+ PD                               V  WT MI+G +QNG+
Sbjct: 181 IHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCSQNGQ 240

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
             + L +F++M   GV  N VT  S +  C +L A+  G  I +  ++  F    L+  S
Sbjct: 241 YEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTLLATS 300

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           LI++Y +C  L+ A+ + + +  +DV +WN+M+    Q G   +A  L  +M       N
Sbjct: 301 LISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGAN 360

Query: 429 VITW------------------------------------NVLISGYIQNGNEDEAVDLF 452
            +T+                                    N +I+ Y + G  + A+ +F
Sbjct: 361 KVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVF 420

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
           + M + D V     SWN++I       +  +AL +F  M+      N  T+LS+L AC  
Sbjct: 421 EAMPRKDDV-----SWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGG 475

Query: 513 LVASNKVKEIH-GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
           L      ++IH          +S  V NS+++ YA+ G+++ ++  FD +  K ++ W+ 
Sbjct: 476 LEDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSI 535

Query: 572 LICGYVLH--GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
           ++  Y     G    A   F +M++ G+KP   TF+S + A +    ++ G+ +      
Sbjct: 536 ILAAYAQSKDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAA 595

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
              +   +   + +I++YG+ G   +A    + MP E     W +L+ A   +G+   A+
Sbjct: 596 SGFVETSLVLGNTIINMYGKCGSPSDAKLVFDQMP-EKCLISWNSLIVAYAHNGHALEAL 654

Query: 690 LAIERL----FDLEPG 701
            +++ +    FD + G
Sbjct: 655 SSLQEMLLQGFDPDSG 670



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 130/289 (44%), Gaps = 6/289 (2%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DV 91
           GN +  +A+ +   +  +G +    T ++LL+AC     + LAR++HA            
Sbjct: 440 GNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNST 499

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY--SRDQRWREVVELFFLMV 149
            V   ++++YA+CG L DA++ F+ + E+ L  WS ++ AY  S+D   R   + F  M 
Sbjct: 500 AVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEME 559

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV-RNSVLAVYVKCGKL 208
            +G+ P +  F   L AC      E G+ MH      G      V  N+++ +Y KCG  
Sbjct: 560 AEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSP 619

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             A+  F+ M EK  ++WNS+I  Y   G   EA     +M  +       T   ++   
Sbjct: 620 SDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYGL 679

Query: 269 NQLGQCDVAMEMVK-RMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 316
           +  G  +  +E  +  ++  G+ P      C++   A+ G    A +L 
Sbjct: 680 SHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELI 728


>gi|413946759|gb|AFW79408.1| hypothetical protein ZEAMMB73_086527 [Zea mays]
          Length = 865

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 260/856 (30%), Positives = 415/856 (48%), Gaps = 91/856 (10%)

Query: 61  INLLQACID-----------SNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLD 108
           ++LL+ C D           S + HLA +LH+  +      D  V   L  + A+ G   
Sbjct: 53  VSLLRQCADVPHGDEDTERLSAARHLAPQLHSLAVRAGRARDPRVACALADLLARLGRWA 112

Query: 109 DAREVFEDMRER------------NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
            AR + ++                +   W+  +   +  + W + +  F  M   G+ PD
Sbjct: 113 SARRLLQEATAAEEEGKEEGDEEVDTMLWNKRVAMLAEAEEWGDAIAAFAEMRARGVAPD 172

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA-VYVKCGKLIWARRFF 215
            +   + L ACG  G    G+ +H+   K G      +    LA +Y +   +  ARR  
Sbjct: 173 GYACARALHACGRAGAPREGQAVHAHAAKAGHVAAHPLVPGFLAGMYAESADVGAARRVL 232

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE---EIKLGVVTFNILIRSYNQLG 272
           E+ D    VAWN +++   ++G  D+A  L ++M R    E    + T+N ++    + G
Sbjct: 233 ETEDAPP-VAWNVVVACCARLGLVDDALDLAERMARSGPVEASPSLATWNAVLSGCARHG 291

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
           +   A  +V+ M   GI PD  + + ++   A                            
Sbjct: 292 RDREAFGVVRSMLERGIPPDSSSMSSLLKSVAS--------------------------- 324

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
                   L  LA GME H   ++     DV  G + ++MY+KC  LE A++VFD ++ +
Sbjct: 325 --------LGLLAHGMEAHCFFLRHRLEPDVYTGTAFVDMYAKCGRLEYAQKVFDTLELR 376

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLF 452
           ++ +WNS++AGY  AG    A +L  +M+ + + P++ TWN LISGY  NG   +AV L 
Sbjct: 377 NITTWNSLVAGYSNAGQFDHALDLVEEMKRNRLDPDITTWNGLISGYSMNGRSSQAVLLL 436

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
           ++M K   +  N  SW SLI+G    G   ++   F +MQ     P+ VT+  +L ACA 
Sbjct: 437 RQM-KAIGLTPNVVSWTSLISGSCHNGDYEDSFYFFNEMQKDHVQPSVVTMSVLLRACAG 495

Query: 513 LVASNKVKEIHGCVL-RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWN 570
           L    K KE+H   L RR+ +  + V  +LID Y+KSGN+  +  IF+ +   K++++WN
Sbjct: 496 LALLAKGKELHCFALRRRAYDRDMVVATALIDMYSKSGNLASATRIFERIQEEKNLVSWN 555

Query: 571 SLICGYVLHGFWHAALDLFDQMKS------FGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           +++ G   HG    A+ LFD M S       GLKP+  TF +++ A     ++  G   F
Sbjct: 556 AMLTGLAAHGQGREAIALFDDMCSASAGAGAGLKPDSITFTALLTACRSMELITEGWDYF 615

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
            ++   Y + P +E+Y+ M+DL  R G L+EA +FI   P +  +S+W ALLT C +HGN
Sbjct: 616 DAMESRYGVTPTVENYACMVDLLARCGYLDEATDFINRSPFKSAASLWGALLTGCVVHGN 675

Query: 685 IDLAVLAIERLFDLEPGDV--LIQRLIL----QIYAICGKPEDALKVRKLERENTRRNSF 738
           + LA  A  +LF LEP +    +Q + L    Q++      + A+K R L   NTR    
Sbjct: 676 LALAEAAARKLFKLEPYNSANYLQMVSLYEREQMFDEAESLKYAMKARAL---NTRP--- 729

Query: 739 GQCWIEVKNLVYTFVTGG------WSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEK 792
           G  WI+++  ++ F   G       +E Y  L+   LQ       A +S     + EE+K
Sbjct: 730 GWSWIQIEQSIHVFQVEGKPPHPDTAEIYQQLVRLVLQIRKAGYVADTSCIAYNVPEEDK 789

Query: 793 EEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
           E++   H+EKLA+ + LI S  +   IR++KN RMC  CHE AK++S +   +I L D+ 
Sbjct: 790 EKLLLSHTEKLAITYGLIHSDASGTPIRVIKNTRMCSDCHEVAKHISALCGRQIILRDAD 849

Query: 853 CLHHFKNGQCSCGDYW 868
             HHF +G+CSC D W
Sbjct: 850 RFHHFTDGKCSCNDRW 865


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 260/907 (28%), Positives = 425/907 (46%), Gaps = 88/907 (9%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSI-HLARKLHAFLNLVTEI-DVFVKTKL 97
           E +     +   G K       +L+ AC  S S+     ++H F+     + DV+V T +
Sbjct: 41  EGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAI 100

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           L +Y   G +  +R+VFE+M +RN+ +W++++  YS      EV++++  M  +G+  ++
Sbjct: 101 LHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNE 160

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
                ++ +CG   D   G+ +   V+K G+     V NS++++    G + +A   F+ 
Sbjct: 161 NSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQ 220

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE------------------------ 253
           M E+D ++WNS+ + Y Q G  +E+ R+F  M R                          
Sbjct: 221 MSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWG 280

Query: 254 -------IKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
                  +K+G    V   N L+R Y   G+   A  + K+M     T D+ +W  +++ 
Sbjct: 281 RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP----TKDLISWNSLMAS 336

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           F  +GR+  AL L   M   G   N VT TSA++AC        G  +H L V  G   +
Sbjct: 337 FVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYN 396

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
            ++GN+L++MY K  E+  + RV   +  +DV +WN++I GY +     KA   F  M+ 
Sbjct: 397 QIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRV 456

Query: 423 SDVPPNVITW------------------------------------NVLISGYIQNGNED 446
             V  N IT                                     N LI+ Y + G+  
Sbjct: 457 EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 516

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
            + DLF     N    RN  +WN+++A     G     L +  KM+S     +  +    
Sbjct: 517 SSQDLF-----NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 571

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
           L A A L    + +++HG  ++   E    + N+  D Y+K G I     +     ++ +
Sbjct: 572 LSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 631

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
            +WN LI     HG++      F +M   G+KP   TF+S++ A S  G+VD G   +  
Sbjct: 632 PSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDM 691

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
           I   + + P IEH   +IDL GRSG+L EA  FI  MP++P+  +W +LL +C+IHGN+D
Sbjct: 692 IARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLD 751

Query: 687 LAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
               A E L  LEP D  +  L   ++A  G+ ED   VRK       +      W+++K
Sbjct: 752 RGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLK 811

Query: 747 NLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSE 801
           + V +F  G  +   +  +Y+ L+++ + +      A +S +    +EE+KE     HSE
Sbjct: 812 DKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSE 871

Query: 802 KLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQ 861
           +LALA+AL+ + +   T+RI KN+R+C  CH   K+VS +    I L D    HHF+ G 
Sbjct: 872 RLALAYALMSTPEGS-TVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGL 930

Query: 862 CSCGDYW 868
           CSC DYW
Sbjct: 931 CSCKDYW 937



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 150/612 (24%), Positives = 269/612 (43%), Gaps = 69/612 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKL-HAFLNLVTEIDVFVK 94
           G   E I +   +  +G     N+   ++ +C       L R++    +    E  + V+
Sbjct: 139 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 198

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+S+    G +D A  +F+ M ER+  +W+++  AY+++    E   +F LM +    
Sbjct: 199 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 258

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            +      +L   G+    + G+ +H LV+K+G   V  V N++L +Y   G+ + A   
Sbjct: 259 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 318

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS------- 267
           F+ M  KD ++WNS+++ +   G + +A  L   M      +  VTF   + +       
Sbjct: 319 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 378

Query: 268 ----------------YNQ-LGQCDVAM-----EMVKRMESLGITP--DVFTWTCMISGF 303
                           YNQ +G   V+M     EM +    L   P  DV  W  +I G+
Sbjct: 379 EKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGY 438

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC---TDLKALAMGMEIHSLAVKMGFT 360
           A++    +AL  F+ M   GV  N +T+ S +SAC    DL  L  G  +H+  V  GF 
Sbjct: 439 AEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDL--LERGKPLHAYIVSAGFE 496

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D  V NSLI MY+KC +L +++ +F+ + ++++ +WN+M+A     G+  +  +L  KM
Sbjct: 497 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 556

Query: 421 QESDVPPNVITWNVLIS-----GYIQNGNE-----------------DEAVDLFQRMGK- 457
           +   V  +  +++  +S       ++ G +                 + A D++ + G+ 
Sbjct: 557 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 616

Query: 458 -------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                     V R+  SWN LI+   + G        F +M      P  VT +S+L AC
Sbjct: 617 GEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 676

Query: 511 AYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIIT 568
           ++    +K    +  + R   LE ++     +ID   +SG +  + T    M  K + + 
Sbjct: 677 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 736

Query: 569 WNSLICGYVLHG 580
           W SL+    +HG
Sbjct: 737 WRSLLASCKIHG 748



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 201/436 (46%), Gaps = 41/436 (9%)

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL-AMGMEIHSL 353
           +W  M+SG  + G   + ++ F++M  +G+ P+   I S ++AC    ++   G+++H  
Sbjct: 25  SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF 84

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
             K G   DV V  +++++Y     +  + +VF+ + D++V SW S++ GY   G   + 
Sbjct: 85  VAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEV 144

Query: 414 YELFIKMQESDVPPNVITWNVLIS--GYIQNGN--------------------EDEAVDL 451
            +++  M+   V  N  + +++IS  G +++ +                    E+  + +
Sbjct: 145 IDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISM 204

Query: 452 FQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
              MG  D          +R+T SWNS+ A Y Q G    +  +F  M+      N  T+
Sbjct: 205 LGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTV 264

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
            ++L    ++      + IHG V++   +S + V N+L+  YA +G  V +  +F  M +
Sbjct: 265 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPT 324

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK-- 621
           KD+I+WNSL+  +V  G    AL L   M S G   N  TF S + A       + G+  
Sbjct: 325 KDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRIL 384

Query: 622 --KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
              V  S     QII      +A++ +YG+ G++ E+   +  MP   D   W AL+   
Sbjct: 385 HGLVVVSGLFYNQIIG-----NALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGGY 438

Query: 680 RIHGNIDLAVLAIERL 695
               + D A+ A + +
Sbjct: 439 AEDEDPDKALAAFQTM 454



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/478 (22%), Positives = 206/478 (43%), Gaps = 48/478 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVF 92
           +GR  +A+ +L S+ + G  V   T+ + L AC   +     R LH  + +V+ +  +  
Sbjct: 340 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV-VVSGLFYNQI 398

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           +   L+S+Y K G + ++R V   M  R++  W+A+IG Y+ D+   + +  F  M  +G
Sbjct: 399 IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 458

Query: 153 LFPDDFLFPKILQACGNCGD-FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           +  +      +L AC   GD  E GK +H+ ++  G      V+NS++ +Y KCG L  +
Sbjct: 459 VSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSS 518

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           +  F  +D ++ + WN+M++     G  +E  +L  KM    + L   +F+  + +  +L
Sbjct: 519 QDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKL 578

Query: 272 GQCDVAMEMVKRMESLGITPDVF-------------------------------TWTCMI 300
              +   ++      LG   D F                               +W  +I
Sbjct: 579 AVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILI 638

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL-AVKMGF 359
           S   ++G   +    F EM  +G+ P  VT  S ++AC+    +  G+  + + A   G 
Sbjct: 639 SALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGL 698

Query: 360 TDDVLVGNSLINMYSKCEELEAAER-VFDMIKDKDVYSWNSMIA-----GYCQAGYCGKA 413
              +     +I++  +   L  AE  +  M    +   W S++A     G    G   KA
Sbjct: 699 EPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGR--KA 756

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
            E   K++  D    V++ N+    +   G  ++  ++ ++MG  +  K+   SW  L
Sbjct: 757 AENLSKLEPEDDSVYVLSSNM----FATTGRWEDVENVRKQMGFKNIKKKQACSWVKL 810


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 220/623 (35%), Positives = 337/623 (54%), Gaps = 59/623 (9%)

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           V   N LI  Y   G  D+A  + + +E  G   D+ +W  M++GF Q G   +ALDLF+
Sbjct: 275 VFVLNSLIHFYASCGHLDLAYLVFEMIE--GNNKDIVSWNSMVTGFVQGGYPDKALDLFE 332

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
            M   GV PN VT+ S +SAC     L +G ++     +     ++ V N+ I+M+ KC 
Sbjct: 333 RMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCG 392

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           E+E A  +FD ++ +DV                                   ++W  +I 
Sbjct: 393 EVEIARGLFDNMEKRDV-----------------------------------VSWTTIID 417

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ--SSC 495
           GY +      A D+F  M + D       +WN LI+GY+Q G+   AL +FR++Q   S 
Sbjct: 418 GYAKMSEHGIARDIFDSMPRKD-----IPAWNVLISGYEQSGRPKEALAIFRELQLTKSG 472

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
             P+ VT+LS L ACA L A +  + IHG + +  ++ +  +  SLID Y+KSG++  + 
Sbjct: 473 ARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAI 532

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            +F  + +KD+  W+++I G  +HG   AA++LF  M+   +KPN  TF +++ A S +G
Sbjct: 533 EVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSG 592

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
           +VD GK++F  +   Y ++P  +HYS M+D+ GR+G LEEA++FIE MP+ P +S+W AL
Sbjct: 593 LVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGAL 652

Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
           L AC IHGN++LA  A  RL ++EPG+     L+  +YA  G  E   ++R+  R++  +
Sbjct: 653 LGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLK 712

Query: 736 NSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSG-----LCI--- 787
              G   IE+   V+ F+ G  +   S  +Y+ L    + + AR    G     LC+   
Sbjct: 713 KETGCSSIEIDGTVHEFIVGDNAHPLSRDIYAKL----DEIMARLRSHGYVANTLCMLQF 768

Query: 788 --EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCE 845
             EEE KE+   +HSEK+A+AF LI  + +   IRIVKN+R+C  CH  AK VS ++  +
Sbjct: 769 VEEEEMKEKALKLHSEKMAIAFGLI-RADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRD 827

Query: 846 IFLADSKCLHHFKNGQCSCGDYW 868
           I L D    HHF  G CSC DYW
Sbjct: 828 IVLRDRYRFHHFSGGHCSCQDYW 850



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 148/518 (28%), Positives = 232/518 (44%), Gaps = 76/518 (14%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSV--YAKCGCLDDAREVFEDMRE 119
           L Q C    S    +++HA +    ++ D +  ++L +   ++    LD AR+VF+ + +
Sbjct: 145 LFQQC---TSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQ 201

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF-PDDFLFPKILQACGNCGDFEAGKL 178
            NLY+W+ +I A +      + V +F  M+ D  F P+ F FP +++A      F  GK 
Sbjct: 202 PNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKA 261

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD--EKDGVAWNSMISGYFQI 236
           +H + IK        V NS++  Y  CG L  A   FE ++   KD V+WNSM++G+ Q 
Sbjct: 262 VHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQG 321

Query: 237 GENDEAHRLFDKMCREEIKLGVVTF----------------------------------- 261
           G  D+A  LF++M  E +    VT                                    
Sbjct: 322 GYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVC 381

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESL------------------GITPDVF--------- 294
           N  I  + + G+ ++A  +   ME                    GI  D+F         
Sbjct: 382 NATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIP 441

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFV--GVMPNGVTITSAISACTDLKALAMGMEIHS 352
            W  +ISG+ Q+GR  +AL +F+E+     G  P+ VT+ S +SAC  L A+ +G  IH 
Sbjct: 442 AWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHG 501

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
              K     +  +  SLI+MYSK  ++E A  VF  I +KDV+ W++MIAG    G    
Sbjct: 502 YIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEA 561

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
           A ELF+ MQE+ V PN +T+  L+     +G  DE   LF  M +   V   T  ++ ++
Sbjct: 562 AIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMV 621

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               + G    AL     M      P+     ++L AC
Sbjct: 622 DVLGRAGHLEEALKFIEGMP---LAPSASVWGALLGAC 656



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/338 (23%), Positives = 144/338 (42%), Gaps = 38/338 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKL-------HAFLNL--- 85
           G  ++A+ + + +  +G      T ++++ AC  + ++ L RK+          +NL   
Sbjct: 322 GYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVC 381

Query: 86  VTEIDVFVK----------------------TKLLSVYAKCGCLDDAREVFEDMRERNLY 123
              ID+FVK                      T ++  YAK      AR++F+ M  +++ 
Sbjct: 382 NATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIP 441

Query: 124 TWSAMIGAYSRDQRWREVVELF--FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
            W+ +I  Y +  R +E + +F    + + G  PD       L AC   G  + G+ +H 
Sbjct: 442 AWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHG 501

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
            + K  +   R +  S++ +Y K G +  A   F S+  KD   W++MI+G    G  + 
Sbjct: 502 YIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEA 561

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMI 300
           A  LF  M   ++K   VTF  L+ + +  G  D    +   ME + G+ P    ++CM+
Sbjct: 562 AIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMV 621

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
               + G   +AL   + M      P+     + + AC
Sbjct: 622 DVLGRAGHLEEALKFIEGMPLA---PSASVWGALLGAC 656


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 239/785 (30%), Positives = 395/785 (50%), Gaps = 85/785 (10%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFE--DMR 118
           LLQAC + N +   +++HAFL +V  I  D +   ++L +YA CG   D  ++F   D+R
Sbjct: 41  LLQACSNPNLLRQGKQVHAFL-IVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
             ++  W+++I ++ R+    + +  +F M+  G+ PD   FP +++AC    +F+    
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +   V  LGM C   V +S++  Y++ GK+    + F+ + +KD V WN M++GY + G 
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219

Query: 239 NDEAHRLFDKMCREEIKLGVVTF-----------------------------------NI 263
            D   + F  M  ++I    VTF                                   N 
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+  Y++ G+ D A ++ + M       D  TW CMISG+ Q+G   ++L  F EM   G
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMS----RADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V+P+ +T +S + + +  + L    +IH   ++   + D+ + ++LI+ Y KC  +  A+
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW----------- 432
            +F      DV  + +MI+GY   G    + E+F  + +  + PN IT            
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455

Query: 433 ---------------------NV---LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                                N+   +I  Y + G  + A ++F+R+ K D V     SW
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV-----SW 510

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           NS+I    Q    + A+ +FR+M  S    +CV+I + L ACA L + +  K IHG +++
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK 570

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
            SL S +   ++LID YAK GN+  +  +F  M  K+I++WNS+I     HG    +L L
Sbjct: 571 HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCL 630

Query: 589 FDQM-KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           F +M +  G++P++ TFL II +    G VD G + F S+TE Y I P  EHY+ ++DL+
Sbjct: 631 FHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLF 690

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           GR+G+L EA E ++ MP  PD+ +W  LL ACR+H N++LA +A  +L DL+P +     
Sbjct: 691 GRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYV 750

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
           LI   +A   + E   KVR L +E   +   G  WIE+    + FV+G  +   S  +YS
Sbjct: 751 LISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYS 810

Query: 768 WLQNV 772
            L ++
Sbjct: 811 LLNSL 815



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 164/681 (24%), Positives = 301/681 (44%), Gaps = 88/681 (12%)

Query: 10  QQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACID 69
           +  + L  ++S+ R  ++ +     NG LN+A+     +   G     +T+  L++AC+ 
Sbjct: 91  KMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVA 150

Query: 70  SNSIHLARKLHAFLN-LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAM 128
             +      L   ++ L  + + FV + L+  Y + G +D   ++F+ + +++   W+ M
Sbjct: 151 LKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVM 210

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM 188
           +  Y++      V++ F +M  D + P+   F  +L  C +    + G  +H LV+  G+
Sbjct: 211 LNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGV 270

Query: 189 SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
                ++NS+L++Y KCG+   A + F  M   D V WN MISGY Q G  +E+   F +
Sbjct: 271 DFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYE 330

Query: 249 MCREEIKLGVVTFNILIRS---YNQLGQC--------------DV--------------A 277
           M    +    +TF+ L+ S   +  L  C              D+               
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
           + M + + S   + DV  +T MISG+  NG    +L++F+ +  V + PN +T+ S +  
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
              L AL +G E+H   +K GF +   +G ++I+MY+KC  +  A  +F+ +  +D+ SW
Sbjct: 451 IGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSW 510

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDV-------------------------------- 425
           NSMI    Q+     A ++F +M  S +                                
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK 570

Query: 426 ---PPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
                +V + + LI  Y + GN   A+++F+ M      ++N  SWNS+IA     G+  
Sbjct: 571 HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-----EKNIVSWNSIIAACGNHGKLK 625

Query: 483 NALGVFRKM-QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS- 540
           ++L +F +M + S   P+ +T L ++ +C ++     V E  G    RS+     +    
Sbjct: 626 DSLCLFHEMVEKSGIRPDQITFLEIISSCCHV---GDVDE--GVRFFRSMTEDYGIQPQQ 680

Query: 541 -----LIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
                ++D + ++G +  +      M    D   W +L+    LH   +  L      K 
Sbjct: 681 EHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHK--NVELAEVASSKL 738

Query: 595 FGLKP-NRGTFLSIILAHSLA 614
             L P N G ++ I  AH+ A
Sbjct: 739 MDLDPSNSGYYVLISNAHANA 759


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 259/886 (29%), Positives = 429/886 (48%), Gaps = 104/886 (11%)

Query: 57   RNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
            R+T   + + C+ S S   A  LH + + +  + DVFV   L+++YAK G + +AR +F+
Sbjct: 727  RHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFD 786

Query: 116  DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
             M  R++  W+ M+ AY       E + LF    + GL PDD                  
Sbjct: 787  GMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDD------------------ 828

Query: 176  GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF--ESMDEKDGVAWNSMISGY 233
                   V    ++ V + + +VL   +K  K    + F   +  D  D +AWN  +S +
Sbjct: 829  -------VTLCTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWF 881

Query: 234  FQIGENDEAHRLFDKMCREEIKLGVVTF-------------------------------- 261
             Q GE  EA   F  M    +    +TF                                
Sbjct: 882  LQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVV 941

Query: 262  ---NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
               N LI  Y + G    A  +  +M  +    D+ +W  MISG A +G    ++ +F +
Sbjct: 942  SVGNCLINMYVKTGSVSRARTVFWQMNEV----DLVSWNTMISGCALSGLEECSVGMFVD 997

Query: 319  MSFVGVMPNGVTITSAISACTDLKA-LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
            +   G++P+  T+ S + AC+ L     +  +IH+ A+K G   D  V  +LI++YSK  
Sbjct: 998  LLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSG 1057

Query: 378  ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
            ++E AE +F      D+ SWN+M+ GY  +G   KA  L+I MQES    N IT      
Sbjct: 1058 KMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLANAAK 1117

Query: 438  GY-----IQNGNEDEAV-----------------DLFQRMGKNDKVKR--------NTAS 467
                   ++ G + +AV                 D++ + G+ +  +R        +  +
Sbjct: 1118 AAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVA 1177

Query: 468  WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
            W ++I+G  + GQ+ +AL  +  M+ S   P+  T  +++ AC+ L A  + ++IH   +
Sbjct: 1178 WTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTV 1237

Query: 528  RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
            + +      VM SL+D YAK GNI  +R +F   ++  I +WN++I G   HG    AL 
Sbjct: 1238 KLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQ 1297

Query: 588  LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
             F++MKS G+ P+R TF+ ++ A S +G+V    + F S+ + Y I P IEHYS ++D  
Sbjct: 1298 FFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDAL 1357

Query: 648  GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
             R+G++ EA + I  MP E  +S++  LL ACR+  + +      E+L  LEP D     
Sbjct: 1358 SRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYV 1417

Query: 708  LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
            L+  +YA   + E+    R + R+   +   G  W+++KN V+ FV G  S   +D++Y+
Sbjct: 1418 LLSNVYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYN 1477

Query: 768  WLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
             ++ +      E     +  + + +EEE+KE     HSEKLA+A+ L+ +  +  T+R++
Sbjct: 1478 KVEYIMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPST-TLRVI 1536

Query: 823  KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            KN+R+C  CH   KY+S +   E+ L D+   HHF++G CSCGDYW
Sbjct: 1537 KNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 176/686 (25%), Positives = 313/686 (45%), Gaps = 62/686 (9%)

Query: 60   YINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
            + ++L+  I ++ + L ++ HA  L      D F+   L+++Y+KCG L  AR++F+   
Sbjct: 629  WFSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTP 688

Query: 119  E--RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
            +  R+L TW+A++ A++   + R+   LF L+ +  +         + + C       A 
Sbjct: 689  DTSRDLVTWNAILSAHA--DKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAA 746

Query: 177  KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
            + +H   +K+G+     V  +++ +Y K G++  AR  F+ M  +D V WN M+  Y   
Sbjct: 747  ESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDT 806

Query: 237  GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT------ 290
            G   EA  LF +  R  ++   VT   L R      + +V    +K++++ G        
Sbjct: 807  GLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKS--KQNVLEWQLKQLKAYGTKLFMYDD 864

Query: 291  ----PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
                 DV  W   +S F Q G T +A+D F +M    V  +G+T    +S    L  L +
Sbjct: 865  DDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLEL 924

Query: 347  GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
            G +IH + V+ G    V VGN LINMY K   +  A  VF  + + D+ SWN+MI+G   
Sbjct: 925  GKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCAL 984

Query: 407  AGYCGKAYELFIKMQESDVPPNVIT----------------------------------- 431
            +G    +  +F+ +    + P+  T                                   
Sbjct: 985  SGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSF 1044

Query: 432  -WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
                LI  Y ++G  +EA  LF      D      ASWN+++ GY   G    AL ++  
Sbjct: 1045 VSTTLIDVYSKSGKMEEAEFLFVNQDGFD-----LASWNAMMHGYIVSGDFPKALRLYIL 1099

Query: 491  MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGN 550
            MQ S    N +T+ +   A   LV   + K+I   V++R     L V++ ++D Y K G 
Sbjct: 1100 MQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGE 1159

Query: 551  IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA 610
            +  +R IF+ + S D + W ++I G V +G    AL  +  M+   ++P+  TF +++ A
Sbjct: 1160 MESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKA 1219

Query: 611  HSLAGMVDLGKKVFCSITECY-QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDS 669
             SL   ++ G+++  +  +      P +   ++++D+Y + G +E+A    +       +
Sbjct: 1220 CSLLTALEQGRQIHANTVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFKRTNTSRIA 1277

Query: 670  SIWEALLTACRIHGNIDLAVLAIERL 695
            S W A++     HGN + A+   E +
Sbjct: 1278 S-WNAMIVGLAQHGNAEEALQFFEEM 1302



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 1/138 (0%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
            NG+   A+     +     +    T+  L++AC    ++   R++HA  + L    D FV
Sbjct: 1188 NGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFV 1247

Query: 94   KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
             T L+ +YAKCG ++DAR +F+      + +W+AMI   ++     E ++ F  M   G+
Sbjct: 1248 MTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGV 1307

Query: 154  FPDDFLFPKILQACGNCG 171
             PD   F  +L AC + G
Sbjct: 1308 TPDRVTFIGVLSACSHSG 1325


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 251/870 (28%), Positives = 422/870 (48%), Gaps = 111/870 (12%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
            LL A +   ++  AR L    + +TE +V     +++ YAK G L DA E+F  M  R+
Sbjct: 65  TLLHAYLSCGALSDARNL--LRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRD 122

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMH 180
           + +W+ ++  Y +  ++   +++F  M Q G   P+ F F  ++++CG  G  E    + 
Sbjct: 123 VASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLL 182

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
            L+ K        V+ +++ + V+CG + +A + F  +     +  NSM+ GY +    D
Sbjct: 183 GLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVD 242

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            A  +F  M   +    VV++N++I + ++ G+   A++MV  M   G+ PD  T+    
Sbjct: 243 HALEIFKSMPERD----VVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTY---- 294

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
                                          TS+++AC  L +L  G ++H   ++    
Sbjct: 295 -------------------------------TSSLTACARLSSLEWGKQLHVQVIRNLPH 323

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D  V ++++ +Y+KC   + A+RVF  ++D++  SW  +I G+ Q G   ++ ELF +M
Sbjct: 324 IDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQM 383

Query: 421 Q-----------------------------------ESDVPPNVITWNVLISGYIQNGNE 445
           +                                   +S     V+  N LIS Y + GN 
Sbjct: 384 RAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNL 443

Query: 446 DEAVDLFQRMGKNDKVK--------------------------RNTASWNSLIAGYQQLG 479
             A  +F  M + D V                           RN  +WN+++  Y Q G
Sbjct: 444 QNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHG 503

Query: 480 QKNNALGVFRKMQSSC-FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
            + + L ++  M +     P+ VT +++   CA + A+    +I G  ++  L     V+
Sbjct: 504 AEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVV 563

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           N++I  Y+K G I  +R  FD +S KD+++WN++I GY  HG    A+++FD + + G K
Sbjct: 564 NAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAK 623

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           P+  ++++++   S +G+V+ GK  F  +   + I P +EH+S M+DL GR+G L EA  
Sbjct: 624 PDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKN 683

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
            I++MP++P + +W ALL+AC+ HGN DLA LA + LFDL+        L+ ++YA  GK
Sbjct: 684 LIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGK 743

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA 778
            +D+ +VRKL R+   + S G  W+EV N V+ F     S      +   L  + E +  
Sbjct: 744 SDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIREKLDELMEKI-- 801

Query: 779 RSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
             +H G    E  + EI   HSEKLA+AF ++ S  A   I I+KN+R+C  CH   K +
Sbjct: 802 --AHLGYVRTESPRSEIH--HSEKLAVAFGIM-SLPAWMPIHIMKNLRICDDCHTVIKLI 856

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S +   E  + D    HHFK G CSC DYW
Sbjct: 857 STVTDREFVIRDGVRFHHFKGGSCSCMDYW 886



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/455 (29%), Positives = 219/455 (48%), Gaps = 45/455 (9%)

Query: 13  HSLLTKKSNPRFRDTH-----LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQAC 67
           H+L   KS P  RD       +  L  +GR+ EA+ ++  +  +G +    TY + L AC
Sbjct: 243 HALEIFKSMPE-RDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTAC 301

Query: 68  IDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWS 126
              +S+   ++LH   +  +  ID +V + ++ +YAKCGC  +A+ VF  +R+RN  +W+
Sbjct: 302 ARLSSLEWGKQLHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWT 361

Query: 127 AMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL 186
            +IG + +   + E VELF  M  + +  D F    ++  C N  D   G  +HSL +K 
Sbjct: 362 VLIGGFLQYGCFSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKS 421

Query: 187 GMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF 246
           G +    V NS++++Y KCG L  A   F  M E+D V+W  MI+ Y Q+G   +A   F
Sbjct: 422 GHTRAVVVSNSLISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFF 481

Query: 247 DKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN 306
           D M        V+T+N ++ +Y Q G  +  ++M                          
Sbjct: 482 DDMSTRN----VITWNAMLGAYIQHGAEEDGLKMYS------------------------ 513

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
                  D+  E     V+P+ VT  +    C D+ A  +G +I    VK+G   D  V 
Sbjct: 514 -------DMLTEKD---VIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVV 563

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           N++I MYSKC  +  A + FD +  KD+ SWN+MI GY Q G   +A E+F  +      
Sbjct: 564 NAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFDDILNKGAK 623

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
           P+ I++  ++SG   +G  +E    F  M ++  +
Sbjct: 624 PDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNI 658



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 137/564 (24%), Positives = 246/564 (43%), Gaps = 86/564 (15%)

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG 223
           L++CG        + +HS +I +G++ V  ++N++L  Y+ CG L  AR           
Sbjct: 32  LRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLL-------- 83

Query: 224 VAWNSMISGYFQIGENDEAHRLFDKMCREEI-KLGVVTFNILIRSYNQLGQCDVAMEMVK 282
                                      R+EI +  V+T NI++  Y +LG    A+E+  
Sbjct: 84  ---------------------------RDEITEPNVITHNIMMNGYAKLGSLSDAVELFG 116

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDL 341
           RM     T DV +W  ++SG+ Q+G+   ALD+F  M   G  +PN  T    + +C  L
Sbjct: 117 RMP----TRDVASWNTIMSGYYQSGQFLNALDIFVSMRQTGDSLPNAFTFGCVMKSCGAL 172

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
               + +++  L  K    DD  V  +L++M  +C  ++ A + F  IK+          
Sbjct: 173 GWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKN---------- 222

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
                                    P +I  N ++ GY ++   D A+++F+ M + D V
Sbjct: 223 -------------------------PTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVV 257

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
                SWN +I+   + G+   AL +   M      P+  T  S L ACA L +    K+
Sbjct: 258 -----SWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQ 312

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           +H  V+R        V +++++ YAK G    ++ +F  +  ++ ++W  LI G++ +G 
Sbjct: 313 LHVQVIRNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGC 372

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
           +  +++LF+QM++  +  ++    ++I        + LG ++     +      ++   S
Sbjct: 373 FSESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNS 432

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            +I +Y + G L+ A E I +   E D   W  ++TA    GNI     A E   D+   
Sbjct: 433 -LISMYAKCGNLQNA-ELIFNFMAERDIVSWTGMITAYSQVGNI---AKAREFFDDMSTR 487

Query: 702 DVLIQRLILQIYAICGKPEDALKV 725
           +V+    +L  Y   G  ED LK+
Sbjct: 488 NVITWNAMLGAYIQHGAEEDGLKM 511



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 161/353 (45%), Gaps = 21/353 (5%)

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF-DM 388
            +  A+ +C    AL     +HS  + +G    V + N+L++ Y  C  L  A  +  D 
Sbjct: 27  ALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDE 86

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           I + +V + N M+ GY + G    A ELF +M   DV     +WN ++SGY Q+G    A
Sbjct: 87  ITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVA----SWNTIMSGYYQSGQFLNA 142

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA---LGVFRKMQSSCFYPNCVTILS 505
           +D+F  M +      N  ++  ++     LG    A   LG+  K  S         ++ 
Sbjct: 143 LDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVD 202

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           +L  C  +  ++K          R    ++   NS++  YAKS  + ++  IF  M  +D
Sbjct: 203 MLVRCGAMDFASK-------QFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERD 255

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
           +++WN +I      G    ALD+   M   G++P+  T+ S + A +    ++ GK++  
Sbjct: 256 VVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHV 315

Query: 626 SITECYQIIPMIEHY--SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
            +    + +P I+ Y  SAM++LY + G  +EA      +  + +S  W  L+
Sbjct: 316 QVI---RNLPHIDPYVASAMVELYAKCGCFKEAKRVFSSLR-DRNSVSWTVLI 364


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 244/782 (31%), Positives = 401/782 (51%), Gaps = 110/782 (14%)

Query: 98  LSVYAKCGCLDDAREVFED--MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
           ++ YA+ G LD AR+VF++  +  R + +W+AM+ AY   ++ RE +             
Sbjct: 29  IACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREAL------------- 75

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
              LF K+ Q   N   +                      N +++ ++K G L  ARR F
Sbjct: 76  --LLFEKMPQR--NTVSW----------------------NGLISGHIKNGMLSEARRVF 109

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           ++M +++ V+W SM+ GY + G+  EA RLF  M  +     VV++ +++    Q G+ D
Sbjct: 110 DTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKN----VVSWTVMLGGLLQEGRVD 165

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            A ++   M       DV   T MI G+ + GR  +A  LF EM       N VT T+ +
Sbjct: 166 DARKLFDMMPE----KDVVAVTNMIGGYCEEGRLDEARALFDEMP----KRNVVTWTAMV 217

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
           S                                    Y++  +++ A ++F+++ +++  
Sbjct: 218 SG-----------------------------------YARNGKVDVARKLFEVMPERNEV 242

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           SW +M+ GY  +G   +A  LF  M    V P V+  N +I G+  NG  D+A  +F+ M
Sbjct: 243 SWTAMLLGYTHSGRMREASSLFDAMP---VKP-VVVCNEMIMGFGLNGEVDKARRVFKGM 298

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
            +     R+  +W+++I  Y++ G +  ALG+FR+MQ      N  +++SVL  C  L +
Sbjct: 299 KE-----RDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLAS 353

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
            +  K++H  ++R   +  L V + LI  Y K GN+V ++ +F+    KD++ WNS+I G
Sbjct: 354 LDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITG 413

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
           Y  HG    AL++F  M S G+ P+  TF+ ++ A S +G V  G ++F ++   YQ+ P
Sbjct: 414 YSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEP 473

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
            IEHY+ ++DL GR+ ++ EAM+ +E MP+EPD+ +W ALL ACR H  +DLA +A+E+L
Sbjct: 474 GIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKL 533

Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
             LEP +     L+  +YA  G+  D   +R+  +  +     G  WIEV+  V+ F TG
Sbjct: 534 AQLEPKNAGPYVLLSNMYAYKGRWRDVEVLREKIKARSVTKLPGCSWIEVEKKVHMF-TG 592

Query: 756 GWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALA 806
           G S+ + +     +  + E +      +G C         ++EEEK    G HSEKLA+A
Sbjct: 593 GDSKGHPE--QPIIMKMLEKLGGLLREAGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVA 650

Query: 807 FALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGD 866
           + L+   +    IR++KN+R+C  CH   K ++ +   EI L D+   HHFK+G CSC D
Sbjct: 651 YGLLKVPEG-MPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGHCSCKD 709

Query: 867 YW 868
           YW
Sbjct: 710 YW 711



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 143/499 (28%), Positives = 234/499 (46%), Gaps = 39/499 (7%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           NG+L+ A  V D        V  +++  ++ A  ++      R+       + + +    
Sbjct: 35  NGQLDHARKVFDETPLPHRTV--SSWNAMVAAYFEARQ---PREALLLFEKMPQRNTVSW 89

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM------ 148
             L+S + K G L +AR VF+ M +RN+ +W++M+  Y R+    E   LF+ M      
Sbjct: 90  NGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHKNVV 149

Query: 149 ---------VQDGLFPD-----DFLFPKILQACGNC--GDFEAGKLMHSLVIKLGMSCVR 192
                    +Q+G   D     D +  K + A  N   G  E G+L  +  +   M    
Sbjct: 150 SWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRN 209

Query: 193 RVR-NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR 251
            V   ++++ Y + GK+  AR+ FE M E++ V+W +M+ GY   G   EA  LFD M  
Sbjct: 210 VVTWTAMVSGYARNGKVDVARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPV 269

Query: 252 EEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQ 311
           +     VV  N +I  +   G+ D A  + K M+      D  TW+ MI  + + G   +
Sbjct: 270 KP----VVVCNEMIMGFGLNGEVDKARRVFKGMKER----DNGTWSAMIKVYERKGYELE 321

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           AL LF+ M   G+  N  ++ S +S C  L +L  G ++H+  V+  F  D+ V + LI 
Sbjct: 322 ALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLIT 381

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MY KC  L  A++VF+    KDV  WNSMI GY Q G   +A  +F  M  S VPP+ +T
Sbjct: 382 MYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVT 441

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           +  ++S    +G   E ++LF+ M    +V+     +  L+    +  Q N A+ +  KM
Sbjct: 442 FIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKM 501

Query: 492 QSSCFYPNCVTILSVLPAC 510
                 P+ +   ++L AC
Sbjct: 502 P---MEPDAIVWGALLGAC 517



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/448 (23%), Positives = 197/448 (43%), Gaps = 55/448 (12%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           ++  +L   +    +  ARKL    +++ E DV   T ++  Y + G LD+AR +F++M 
Sbjct: 150 SWTVMLGGLLQEGRVDDARKL---FDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMP 206

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGK 177
           +RN+ TW+AM+  Y+R+ +     +LF +M +     ++  +  +L    + G   EA  
Sbjct: 207 KRNVVTWTAMVSGYARNGKVDVARKLFEVMPER----NEVSWTAMLLGYTHSGRMREASS 262

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
           L  ++ +K  + C     N ++  +   G++  ARR F+ M E+D   W++MI  Y + G
Sbjct: 263 LFDAMPVKPVVVC-----NEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKG 317

Query: 238 ENDEAHRLFDKMCREEIKLGVVTF-----------------------------------N 262
              EA  LF +M RE + L   +                                    +
Sbjct: 318 YELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVAS 377

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
           +LI  Y + G    A ++  R        DV  W  MI+G++Q+G   +AL++F +M   
Sbjct: 378 VLITMYVKCGNLVRAKQVFNRFP----LKDVVMWNSMITGYSQHGLGEEALNVFHDMCSS 433

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEEL-E 380
           GV P+ VT    +SAC+    +  G+E+  ++  K      +     L+++  + +++ E
Sbjct: 434 GVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNE 493

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
           A + V  M  + D   W +++ G C+        E+ ++      P N   + +L + Y 
Sbjct: 494 AMKLVEKMPMEPDAIVWGALL-GACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYA 552

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASW 468
             G   +   L +++      K    SW
Sbjct: 553 YKGRWRDVEVLREKIKARSVTKLPGCSW 580



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 154/337 (45%), Gaps = 40/337 (11%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFLNLVTEID 90
           C  GRL+EA  + D +       +RN  T+  ++     +  + +ARKL   +    E+ 
Sbjct: 190 CEEGRLDEARALFDEMP------KRNVVTWTAMVSGYARNGKVDVARKLFEVMPERNEVS 243

Query: 91  ----------------------------VFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
                                       V V  +++  +   G +D AR VF+ M+ER+ 
Sbjct: 244 WTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDN 303

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            TWSAMI  Y R     E + LF  M ++GL  +      +L  C +    + GK +H+ 
Sbjct: 304 GTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQ 363

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           +++        V + ++ +YVKCG L+ A++ F     KD V WNSMI+GY Q G  +EA
Sbjct: 364 LVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEA 423

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMIS 301
             +F  MC   +    VTF  ++ + +  G+    +E+ + M+    + P +  + C++ 
Sbjct: 424 LNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVD 483

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
              +  + ++A+ L ++M    + P+ +   + + AC
Sbjct: 484 LLGRADQVNEAMKLVEKMP---MEPDAIVWGALLGAC 517



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 107/225 (47%), Gaps = 15/225 (6%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VFVKTKL 97
           EA+ +   +  +G  +   + I++L  C+   S+   +++HA L + +E D  ++V + L
Sbjct: 321 EALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQL-VRSEFDQDLYVASVL 379

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           +++Y KCG L  A++VF     +++  W++MI  YS+     E + +F  M   G+ PDD
Sbjct: 380 ITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDD 439

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV------LAVYVKCGKLIWA 211
             F  +L AC       +GK+   L +   M C  +V   +      + +  +  ++  A
Sbjct: 440 VTFIGVLSACSY-----SGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEA 494

Query: 212 RRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
            +  E M  E D + W +++       + D A    +K+ + E K
Sbjct: 495 MKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPK 539


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 241/710 (33%), Positives = 371/710 (52%), Gaps = 63/710 (8%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           NS +A Y + G++  ARR F+ M +K  V+WNSM++GYFQ     EA  LFDKM      
Sbjct: 20  NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER--- 76

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
              V++N LI  Y +      A +    M       +V +WT M+ G+ Q G  S+A  L
Sbjct: 77  -NTVSWNGLISGYVKNRMVSEARKAFDTMPER----NVVSWTAMVRGYVQEGLVSEAETL 131

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKAL--AMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
           F +M       N V+ T  +     ++ +  A G+    + VK     DV+   ++I+ Y
Sbjct: 132 FWQMP----EKNVVSWTVMLGGLIQVRRIDEARGL-FDIMPVK-----DVVARTNMISGY 181

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
            +   L  A  +FD +  ++V SW +MI+GY Q G    A +LF  M E     N ++W 
Sbjct: 182 CQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEK----NEVSWT 237

Query: 434 VLISGYIQNGNEDEAVDLFQRM---------------GKNDKV-----------KRNTAS 467
            ++ GY Q G  +EA +LF  M               G+N +V           +++  +
Sbjct: 238 AMLMGYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGT 297

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           W+++I  Y++ G +  AL +F  MQ      N  +++SVL  CA L + +  +++H  ++
Sbjct: 298 WSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELV 357

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           +   +S + V + LI  Y K G++V +R IFD  S KDI+ WNS+I GY  HG    AL 
Sbjct: 358 KSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQ 417

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           +F +M S G+  +  TF+ ++ A S  G V  G ++F S+   Y + P  EHY+ M+DL 
Sbjct: 418 VFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLL 477

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           GR+G + +AM+ I+ MP+E D+ IW ALL ACR H N++LA +A ++L  LEP +     
Sbjct: 478 GRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYI 537

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
           L+  IYA  G+  D  ++R+  R      S G  WIEV+  V+ F TGG S  + +L  S
Sbjct: 538 LLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMF-TGGVSTKHPEL--S 594

Query: 768 WLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
            +  + E +      +G           ++EEEK    G HSE+LA+AF L+   +    
Sbjct: 595 SIMKMLEKLDGMLREAGYYPDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEG-MP 653

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IR++KN+R+C  CH   K ++ +   EI L D+   HHFK+G CSC DYW
Sbjct: 654 IRVMKNLRVCGDCHSAIKLIAKITGREIILRDANRFHHFKDGFCSCRDYW 703



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 226/462 (48%), Gaps = 33/462 (7%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNT--YINLLQACIDSNSIHLARKLHAFLNLVTEIDVF 92
           N R  EA  + D +        RNT  +  L+   + +  +  ARK  AF + + E +V 
Sbjct: 60  NNRPREARYLFDKMP------ERNTVSWNGLISGYVKNRMVSEARK--AF-DTMPERNVV 110

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
             T ++  Y + G + +A  +F  M E+N+ +W+ M+G   + +R  E   LF +M    
Sbjct: 111 SWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLIQVRRIDEARGLFDIM---- 166

Query: 153 LFPDDFLFPKILQACGNCGD---FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             P   +  +     G C +    EA +L   +  +  +S       ++++ YV+ G++ 
Sbjct: 167 --PVKDVVARTNMISGYCQEGRLAEARELFDEMPRRNVISW-----TTMISGYVQNGQVD 219

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            AR+ FE M EK+ V+W +M+ GY Q G  +EA  LFD M  +     VV  N +I  + 
Sbjct: 220 VARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVK----AVVACNAMILGFG 275

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           Q G+   A ++  ++       D  TW+ MI  + + G   +AL+LF  M   GV  N  
Sbjct: 276 QNGEVAKARQVFDQIRE----KDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFP 331

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           ++ S +S C  L +L  G ++H+  VK  F  DV V + LI MY KC +L  A ++FD  
Sbjct: 332 SLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRF 391

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
             KD+  WNS+I GY Q G   +A ++F +M  S +  + +T+  ++S     G   E +
Sbjct: 392 SPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGL 451

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           ++F+ M     V+  T  +  ++    + G  N+A+ + +KM
Sbjct: 452 EIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKM 493



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 148/521 (28%), Positives = 235/521 (45%), Gaps = 82/521 (15%)

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           ++ YA+ G ++ AR VF++M ++ + +W++M+  Y ++ R RE   LF  M +      +
Sbjct: 23  IARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWN 82

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
            L    ++   N    EA K   ++  +  +S    VR      YV+ G +  A   F  
Sbjct: 83  GLISGYVK---NRMVSEARKAFDTMPERNVVSWTAMVRG-----YVQEGLVSEAETLFWQ 134

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
           M EK+ V+W  M+ G  Q+   DEA  LFD M  ++    VV    +I  Y Q G+   A
Sbjct: 135 MPEKNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKD----VVARTNMISGYCQEGRLAEA 190

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP--NGVTITSAI 335
            E+   M       +V +WT MISG+ QNG+   A  LF+      VMP  N V+ T+ +
Sbjct: 191 RELFDEMPRR----NVISWTTMISGYVQNGQVDVARKLFE------VMPEKNEVSWTAML 240

Query: 336 SACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
              T    +    E+  ++ VK      V+  N++I  + +  E+  A +VFD I++KD 
Sbjct: 241 MGYTQGGRIEEASELFDAMPVKA-----VVACNAMILGFGQNGEVAKARQVFDQIREKDD 295

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN-------------------------- 428
            +W++MI  Y + G+  +A  LF  MQ   V  N                          
Sbjct: 296 GTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAE 355

Query: 429 ---------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
                    V   +VLI+ Y++ G+  +A  +F R    D V      WNS+I GY Q G
Sbjct: 356 LVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVM-----WNSIITGYAQHG 410

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
               AL VF +M SS    + VT + VL AC+Y   + KVKE  G  +  S++S   V  
Sbjct: 411 LVEEALQVFHEMCSSGMATDGVTFVGVLSACSY---TGKVKE--GLEIFESMKSKYLVEP 465

Query: 540 S------LIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLI 573
                  ++D   ++G +  +  +   M    D I W +L+
Sbjct: 466 KTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALL 506



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 103/448 (22%), Positives = 191/448 (42%), Gaps = 55/448 (12%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           ++  +L   I    I  AR L    +++   DV  +T ++S Y + G L +ARE+F++M 
Sbjct: 142 SWTVMLGGLIQVRRIDEARGL---FDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMP 198

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGK 177
            RN+ +W+ MI  Y ++ +     +LF +M +     ++  +  +L      G   EA +
Sbjct: 199 RRNVISWTTMISGYVQNGQVDVARKLFEVMPEK----NEVSWTAMLMGYTQGGRIEEASE 254

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
           L  ++ +K  ++C     N+++  + + G++  AR+ F+ + EKD   W++MI  Y + G
Sbjct: 255 LFDAMPVKAVVAC-----NAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKG 309

Query: 238 ENDEAHRLFDKMCREEIKLG-----------------------------------VVTFN 262
              EA  LF  M RE ++                                     V   +
Sbjct: 310 FEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVAS 369

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
           +LI  Y + G    A ++  R        D+  W  +I+G+AQ+G   +AL +F EM   
Sbjct: 370 VLITMYVKCGDLVKARQIFDRFS----PKDIVMWNSIITGYAQHGLVEEALQVFHEMCSS 425

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEEL-E 380
           G+  +GVT    +SAC+    +  G+EI  S+  K            ++++  +   + +
Sbjct: 426 GMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVND 485

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
           A + +  M  + D   W +++ G C+        E+  K      P N   + +L + Y 
Sbjct: 486 AMDLIQKMPVEADAIIWGALL-GACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYA 544

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASW 468
             G   +  +L + M      K    SW
Sbjct: 545 SKGRWGDVAELRRNMRVKKVSKSPGCSW 572


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 253/849 (29%), Positives = 414/849 (48%), Gaps = 106/849 (12%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKL 97
           L  A  V  +I T G + R +    L+     S+ ++ AR+L    + ++E D   +T +
Sbjct: 30  LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQL---FDEISEPDKIARTTM 86

Query: 98  LSVYAKCGCLDDAREVFED----MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           +S Y   G +  AR VFE     MR+  +Y  +AMI  +S +      + LF  M  +G 
Sbjct: 87  VSGYCASGDITLARGVFEKAPVCMRDTVMY--NAMITGFSHNNDGYSAINLFCKMKHEGF 144

Query: 154 FPDDFLFPKILQACGNCGDFEAGKL-MHSLVIKLGMSCVRRVRNSVLAVYVKCGK----L 208
            PD+F F  +L       D E   +  H+  +K G   +  V N++++VY KC      L
Sbjct: 145 KPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             AR+ F+ + EKD  +W +M++GY + G  D    L + M                   
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM------------------- 245

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
                 D  M++V              +  MISG+   G   +AL++ + M   G+  + 
Sbjct: 246 ------DDNMKLV-------------AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDE 286

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVK---MGFTDDVLVGNSLINMYSKCEELEAAERV 385
            T  S I AC     L +G ++H+  ++     F  D    NSL+++Y KC + + A  +
Sbjct: 287 FTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAI 342

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
                                          F KM   D+    ++WN L+SGY+ +G+ 
Sbjct: 343 -------------------------------FEKMPAKDL----VSWNALLSGYVSSGHI 367

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
            EA  +F+ M +     +N  SW  +I+G  + G     L +F  M+   F P       
Sbjct: 368 GEAKLIFKEMKE-----KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSG 422

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
            + +CA L A    ++ H  +L+   +SSL   N+LI  YAK G +  +R +F  M   D
Sbjct: 423 AIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLD 482

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
            ++WN+LI     HG    A+D++++M   G++P+R T L+++ A S AG+VD G+K F 
Sbjct: 483 SVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFD 542

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
           S+   Y+I P  +HY+ +IDL  RSGK  +A   IE +P +P + IWEALL+ CR+HGN+
Sbjct: 543 SMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNM 602

Query: 686 DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV 745
           +L ++A ++LF L P       L+  ++A  G+ E+  +VRKL R+   +      WIE+
Sbjct: 603 ELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEM 662

Query: 746 KNLVYTFVTGGWSESYSDLLYSWLQNVPENVT--ARSSHSGLCIEEEE----KEEISGIH 799
           +  V+TF+    S   ++ +Y +LQ++ + +        +   + + E    KE++   H
Sbjct: 663 ETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTH 722

Query: 800 SEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKN 859
           SEK+A+AF L+       TIRI KN+R C  CH   +++S +   +I L D K  HHF+N
Sbjct: 723 SEKIAVAFGLMKLPPGT-TIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRN 781

Query: 860 GQCSCGDYW 868
           G+CSCG++W
Sbjct: 782 GECSCGNFW 790



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 181/396 (45%), Gaps = 46/396 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
           G   EA+ ++  + + G ++   TY ++++AC  +  + L +++HA++    +       
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN 324

Query: 96  KLLSVYAKCGCLDDAREVFE-------------------------------DMRERNLYT 124
            L+S+Y KCG  D+AR +FE                               +M+E+N+ +
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           W  MI   + +    E ++LF  M ++G  P D+ F   +++C   G +  G+  H+ ++
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL 444

Query: 185 KLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHR 244
           K+G        N+++ +Y KCG +  AR+ F +M   D V+WN++I+   Q G   EA  
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVD 504

Query: 245 LFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGF 303
           ++++M ++ I+   +T   ++ + +  G  D   +    ME++  I P    +  +I   
Sbjct: 505 VYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLL 564

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT--- 360
            ++G+ S A  + + + F    P      + +S C     +   ME+  +A    F    
Sbjct: 565 CRSGKFSDAESVIESLPF---KPTAEIWEALLSGCR----VHGNMELGIIAADKLFGLIP 617

Query: 361 --DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
             D   +   L NM++   + E   RV  +++D+ V
Sbjct: 618 EHDGTYM--LLSNMHAATGQWEEVARVRKLMRDRGV 651



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 187/388 (48%), Gaps = 17/388 (4%)

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           +L +   +H   +  GF     + N LI++Y K  EL  A ++FD I + D  +  +M++
Sbjct: 29  SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
           GYC +G    A  +F K        + + +N +I+G+  N +   A++LF +M K++  K
Sbjct: 89  GYCASGDITLARGVFEKAPV--CMRDTVMYNAMITGFSHNNDGYSAINLFCKM-KHEGFK 145

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFR--KMQSSCFYPNCVT--ILSVLPACAYLVASNK 518
            +  ++ S++AG   +         F    ++S   Y   V+  ++SV   CA   +S  
Sbjct: 146 PDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA---SSPS 202

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYV 577
           +      V    LE       +++  Y K+G       + +GM     ++ +N++I GYV
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
             GF+  AL++  +M S G++ +  T+ S+I A + AG++ LGK+V   +          
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF 322

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
           +  ++++ LY + GK +EA    E MP + D   W ALL+     G+I  A L  +   +
Sbjct: 323 D--NSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFK---E 376

Query: 698 LEPGDVLIQRLILQIYAICGKPEDALKV 725
           ++  ++L   +++   A  G  E+ LK+
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKL 404


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 214/586 (36%), Positives = 325/586 (55%), Gaps = 18/586 (3%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            P V  W  +I  +A NG    A+DL+  M  +GV PN  T    + AC+ L A+  G+E
Sbjct: 71  NPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVE 130

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           IHS A   G   DV V  +L++ Y+KC  L  A+R+F  +  +DV +WN+MIAG    G 
Sbjct: 131 IHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGL 190

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN-EDEAVDLFQRMGKNDKVKRNTASW 468
           C  A +L ++MQE  + PN  T    I G +        A  +F  MG      RN  SW
Sbjct: 191 CDDAVQLIMQMQEEGICPNSST----IVGVLPTCQCLLYARKIFDVMGV-----RNEVSW 241

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           +++I GY        AL +FR MQ S   P+  T+L VLPAC++L A       HG ++ 
Sbjct: 242 SAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIV 301

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
           R   +   + N+LID Y+K G I ++R +F+ M   DI++WN++I GY +HG    AL L
Sbjct: 302 RGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGL 361

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F  + + GLKP+  TF+ ++ + S +G+V  G+  F +++  + I+P +EH   M+D+ G
Sbjct: 362 FHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILG 421

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+G ++EA  FI +MP EPD  IW ALL+ACRIH NI+L     +++  L P       L
Sbjct: 422 RAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVL 481

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  IY+  G+ +DA  +R  +++   +   G  WIE+  +V+ FV G  S      +   
Sbjct: 482 LSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRK 541

Query: 769 LQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
           L+ +   +  R  +   C      +EEEEKE+I   HSEKLA+AF ++ + +A   I + 
Sbjct: 542 LEELLVEMK-RLGYQAECSFVFQDVEEEEKEQILLYHSEKLAIAFGIL-NLKAGRPILVT 599

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN+R+C  CH   K+++++   EI + D+   HHFKNG C+CGD+W
Sbjct: 600 KNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNCGDFW 645



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 224/455 (49%), Gaps = 11/455 (2%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           +N Y++LL+ACI S S+  A+K+H  FL   +  D  V  KL  +Y  C  +  AR +F+
Sbjct: 8   KNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFD 67

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
           ++   ++  W+ +I AY+ +  +   ++L+  M+  G+ P+ + +P +L+AC      E 
Sbjct: 68  EIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +HS     G+     V  +++  Y KCG L+ A+R F SM  +D VAWN+MI+G   
Sbjct: 128 GVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSL 187

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
            G  D+A +L  +M  E I     T          L  C   +   K  + +G+  +V +
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTI------VGVLPTCQCLLYARKIFDVMGVRNEV-S 240

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W+ MI G+  +    +ALD+F+ M   G+ P+  T+   + AC+ L AL  G   H   +
Sbjct: 241 WSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLI 300

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
             GF  D L+ N+LI+MYSKC ++  A  VF+ +   D+ SWN+MI GY   G   +A  
Sbjct: 301 VRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALG 360

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           LF  +    + P+ IT+  L+S    +G   E    F  M ++  +         ++   
Sbjct: 361 LFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDIL 420

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            + G  + A    R M    F P+     ++L AC
Sbjct: 421 GRAGLIDEAHHFIRNMP---FEPDVRIWSALLSAC 452



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 140/303 (46%), Gaps = 15/303 (4%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           + ++ V   C CL  AR++F+ M  RN  +WSAMIG Y      +E +++F +M   G+ 
Sbjct: 211 STIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGID 270

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD      +L AC +    + G   H  +I  G +    + N+++ +Y KCGK+ +AR  
Sbjct: 271 PDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREV 330

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F  MD  D V+WN+MI GY   G   EA  LF  +    +K   +TF  L+ S +  G  
Sbjct: 331 FNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSG-- 388

Query: 275 DVAMEMVKRMESL----GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            + ME     +++     I P +    CM+    + G   +A    + M F    P+   
Sbjct: 389 -LVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPF---EPDVRI 444

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDM 388
            ++ +SAC   K + +G E+      +G       GN ++  N+YS     + A  +   
Sbjct: 445 WSALLSACRIHKNIELGEEVSKKIQSLGPES---TGNFVLLSNIYSAAGRWDDAAHIRIT 501

Query: 389 IKD 391
            KD
Sbjct: 502 QKD 504



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 142/341 (41%), Gaps = 78/341 (22%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFV 93
           NG  + AI +  S+   G +  + TY  +L+AC    +I    ++H+   +   E DVFV
Sbjct: 87  NGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHSHAKMFGLESDVFV 146

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+  YAKCG L +A+ +F  M  R++  W+AMI   S      + V+L   M ++G+
Sbjct: 147 CTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLCDDAVQLIMQMQEEGI 206

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+                                       ++++ V   C  L++AR+
Sbjct: 207 CPNS--------------------------------------STIVGVLPTCQCLLYARK 228

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------ 261
            F+ M  ++ V+W++MI GY       EA  +F  M    I   + T             
Sbjct: 229 IFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAA 288

Query: 262 -----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
                                  N LI  Y++ G+   A E+  RM+      D+ +W  
Sbjct: 289 LQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDR----HDIVSWNA 344

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           MI G+  +G   +AL LF ++  +G+ P+ +T    +S+C+
Sbjct: 345 MIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCS 385



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 90/205 (43%), Gaps = 28/205 (13%)

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
           L +L AC    +  + K+IH   L+ +  +   V++ L   Y     +V +R +FD + +
Sbjct: 12  LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA------------- 610
             +I WN +I  Y  +G +  A+DL+  M   G++PN+ T+  ++ A             
Sbjct: 72  PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131

Query: 611 HSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSS 670
           HS A M  L   VF                +A++D Y + G L EA      M    D  
Sbjct: 132 HSHAKMFGLESDVFVC--------------TALVDFYAKCGILVEAQRLFSSMS-HRDVV 176

Query: 671 IWEALLTACRIHGNIDLAVLAIERL 695
            W A++  C ++G  D AV  I ++
Sbjct: 177 AWNAMIAGCSLYGLCDDAVQLIMQM 201


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 237/772 (30%), Positives = 382/772 (49%), Gaps = 78/772 (10%)

Query: 166 ACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA 225
           A   C D E+ + +H  +     + V  + N ++  Y KCG +  AR  F+++  K+  +
Sbjct: 33  ALRQCQDLESVRQIHDRISGAASANVF-LGNEIVRAYGKCGSVASARAAFDAIARKNDYS 91

Query: 226 WNSMISGYFQIGENDEAHRLFDKM--------------------CREE------------ 253
           W SM++ Y Q G    A  L+ +M                      EE            
Sbjct: 92  WGSMLTAYAQNGHYRAALDLYKRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTK 151

Query: 254 -IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
            +KL V+  N L+  Y + G  + A  + +RM    ++    +W  MI+ +AQ+G   +A
Sbjct: 152 GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVS----SWNAMIAAYAQSGHFEEA 207

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
           + L+++M    V P+  T TS +SAC++L  L  G +IH+L    G   D+ + N+L+ M
Sbjct: 208 IRLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTM 264

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y++C+ L+ A ++F  +  +DV SW++MIA + +     +A E + KMQ   V PN  T+
Sbjct: 265 YARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTF 324

Query: 433 ---------------------NVLISGY-IQNGNEDEAVDLFQRMGKNDKVK-------- 462
                                 +L +GY I   N    VDL+   G  D+ +        
Sbjct: 325 ASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIEN 384

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS-VLPACAYLVASNKVKE 521
           R+   W  LI GY + G +   L ++R+M+++   P    I S V+ ACA L A    ++
Sbjct: 385 RDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQ 444

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
            H  +    + S   +  SL++ Y++ GN+  +R +FD MSS+D + W +LI GY  HG 
Sbjct: 445 AHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGE 504

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
              AL L+ +M+  G +P+  TF+ ++ A S AG+ + GK++F SI   Y + P I HYS
Sbjct: 505 HGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYS 564

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            +IDL  R+G+L +A E I  MP+EP+   W +LL A RIH ++  A  A  ++  L+P 
Sbjct: 565 CIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPV 624

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
           D     L+  ++A+ G       VR        +   G  WIEV + ++ F  G  S   
Sbjct: 625 DPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPR 684

Query: 762 SDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAP 816
              +++ LQ +   +        S      + E+EKE +  +HSEKLA+AF LI ++   
Sbjct: 685 FQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGT 744

Query: 817 HTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            T+RI   +R+C  CH   K++S +   EI + DS   H F++GQCSCGDYW
Sbjct: 745 -TLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 147/590 (24%), Positives = 279/590 (47%), Gaps = 84/590 (14%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
           Y + L+ C D  S+   R++H  ++     +VF+  +++  Y KCG +  AR  F+ +  
Sbjct: 30  YRDALRQCQDLESV---RQIHDRISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIAR 86

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           +N Y+W +M+ AY+++  +R  ++L+  M    L P+  ++  +L AC +    E GK +
Sbjct: 87  KNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAI 143

Query: 180 HSLVIKL-GMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           HS +    G+     + NS+L +Y KCG L  A+R FE M  +   +WN+MI+ Y Q G 
Sbjct: 144 HSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGH 203

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT-------- 290
            +EA RL++ M   +++  V TF  ++ + + LG  D   ++   + S G          
Sbjct: 204 FEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNA 260

Query: 291 -----------------------PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
                                   DV +W+ MI+ FA+     +A++ + +M   GV PN
Sbjct: 261 LLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPN 320

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             T  S + AC  +  L  G  +H   +  G+   ++ G +L+++Y+    L+ A  +FD
Sbjct: 321 YYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFD 380

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE-SDVPPNVITWNVLISG-------- 438
            I+++D   W  +I GY + G+     EL+ +M+  + VP   I ++ +IS         
Sbjct: 381 QIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFA 440

Query: 439 ---------------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                                      Y + GN + A  +F +M       R+T +W +L
Sbjct: 441 DARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMS-----SRDTLAWTTL 495

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-S 530
           IAGY + G+   ALG++++M+     P+ +T + VL AC++     + K++   +    +
Sbjct: 496 IAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYA 555

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
           +  ++   + +ID  +++G +  +  + + M    + +TW+SL+    +H
Sbjct: 556 MHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIH 605



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 154/605 (25%), Positives = 278/605 (45%), Gaps = 65/605 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT--EIDVF 92
           NG    A+ +   +  Q   V    Y  +L AC    ++   + +H+ ++     ++DV 
Sbjct: 102 NGHYRAALDLYKRMDLQPNPV---VYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVI 158

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           ++  LL++YAKCG L+DA+ +FE M  R++ +W+AMI AY++   + E + L+  M    
Sbjct: 159 LENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---D 215

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P    F  +L AC N G  + G+ +H+L+   G      ++N++L +Y +C  L  A 
Sbjct: 216 VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAA 275

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------- 261
           + F+ +  +D V+W++MI+ + +    DEA   + KM  E ++    TF           
Sbjct: 276 KIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVG 335

Query: 262 ------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                     L+  Y   G  D A  +  ++E+     D   WT
Sbjct: 336 DLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIEN----RDEGLWT 391

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS-AISACTDLKALAMGMEIHSLAVK 356
            +I G+++ G  +  L+L++EM     +P    I S  ISAC  L A A   + HS    
Sbjct: 392 VLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEA 451

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G   D ++  SL+NMYS+   LE+A +VFD +  +D  +W ++IAGY + G  G A  L
Sbjct: 452 DGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGL 511

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           + +M+     P+ +T+ V++      G +++   LF  +  +  +  N A ++ +I    
Sbjct: 512 YKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLS 571

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           + G+ ++A  +   M      PN VT  S+L A    +  +  +  H       L+   P
Sbjct: 572 RAGRLSDAEELINAMP---VEPNDVTWSSLLGASR--IHKDVKRATHAAGQITKLDPVDP 626

Query: 537 VMNSLI-DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
               L+ + +A +GN+        GM+S      N+++   V      + +++ DQ+  F
Sbjct: 627 ASYVLLSNVHAVTGNLA-------GMAS----VRNTMVARGVKKRRGSSWIEVADQIHEF 675

Query: 596 GLKPN 600
            +  N
Sbjct: 676 NVGDN 680


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 253/748 (33%), Positives = 376/748 (50%), Gaps = 86/748 (11%)

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
           R+ N++L++ V+ G+   A R F  M E+D  +WN M+ GY + G  DEA  L+ +M   
Sbjct: 124 RLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWA 183

Query: 253 EIKLGVVTFNILIRS--------------------------------YNQLGQCDVAMEM 280
            ++  V TF  ++RS                                     +C   M  
Sbjct: 184 GVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAA 243

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
            K  +S+ +  D  +W  MI+G  +NG  +  L+LF  M    V PN +TITS   A   
Sbjct: 244 RKVFDSMTVM-DCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGL 302

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
           L  +    E+H LAVK GF  DV   NSLI MY+    +  A  VF  +  +D  +W +M
Sbjct: 303 LSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAM 362

Query: 401 IAGYCQAGYCGKAYELFIKMQESDVPPNVIT----------------------------- 431
           I+GY + G+  KA E++  M+ ++V P+ IT                             
Sbjct: 363 ISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGF 422

Query: 432 ------WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL 485
                  N ++  Y ++   D+A+++F+ M + D V     SW+S+IAG+    +   AL
Sbjct: 423 ISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVV-----SWSSMIAGFCFNHRNFEAL 477

Query: 486 GVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
             FR M +    PN VT ++ L ACA   A    KEIH  VLR  +E    + N+LID Y
Sbjct: 478 YYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLY 536

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
            K G   Y+   F    +KD+++WN +I G+V HG    AL  F+QM   G  P+  TF+
Sbjct: 537 VKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFV 596

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
           +++ A S  GMV  G ++F S+TE Y I+P ++HY+ M+DL  R+G+L EA  FI +MPI
Sbjct: 597 ALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPI 656

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
            PD+++W ALL  CRIH +++L  LA + +  LEP D     L+  +YA     +   +V
Sbjct: 657 TPDAAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARV 716

Query: 726 RKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGL 785
           RK  RE    +  G  W+EVK +V+ F+T    ES+  +    +  V E +  R   SG 
Sbjct: 717 RKTMREKGLDHDSGCSWVEVKGVVHAFLTD--DESHPQIRE--INTVLEGIYERMKASGY 772

Query: 786 ------CIEEEE-KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
                 C E+E  K++I   HSE+LA+AF LI ++    +I + KN   C  CH   K +
Sbjct: 773 APVESHCPEDEVLKDDIFCGHSERLAVAFGLINTTPGT-SISVTKNQYTCQSCHRILKMI 831

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGD 866
           S +   +I + DSK LHHFK+G CSCGD
Sbjct: 832 SNIVRRDIIVRDSKQLHHFKDGSCSCGD 859



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 184/657 (28%), Positives = 306/657 (46%), Gaps = 100/657 (15%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHL-------ARKL 79
           T L  LC +G+L +A+ +L+S A    +   + Y+ L + C    ++         A   
Sbjct: 61  TELRALCSHGQLAQALWLLESSAEPPDE---DAYVALFRLCEWRRAVEPGLRACAHADDR 117

Query: 80  HAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
           HA+  L       +   +LS+  + G    A  VF  M ER++++W+ M+G Y +     
Sbjct: 118 HAWFGLR------LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLD 171

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E ++L+  M+  G+ PD + FP +L++CG   D+  G+ +H+ V++ G      V N+++
Sbjct: 172 EALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALM 231

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK---- 255
            +Y KCG ++ AR+ F+SM   D ++WN+MI+G+F+ GE +    LF  M  +E++    
Sbjct: 232 TMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLM 291

Query: 256 -----------LGVVTF--------------------NILIRSYNQLGQCDVAMEMVKRM 284
                      L  VTF                    N LI+ Y  LG    A  +  RM
Sbjct: 292 TITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRM 351

Query: 285 ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
           +    T D  TWT MISG+ +NG   +AL+++  M    V P+ +TI SA++AC  L +L
Sbjct: 352 D----TRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSL 407

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
            +G+++H LA   GF   ++V N+++ MY+K + ++ A  VF  + +KDV SW+SMIAG+
Sbjct: 408 DVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGF 467

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITW-------------------------------- 432
           C      +A   F  M  +DV PN +T+                                
Sbjct: 468 CFNHRNFEALYYFRHML-ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEG 526

Query: 433 ---NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
              N LI  Y++ G    A   F   G  D V     SWN +IAG+   G  + AL  F 
Sbjct: 527 YLPNALIDLYVKCGQTGYAWAQFCAHGAKDVV-----SWNIMIAGFVAHGHGDTALSFFN 581

Query: 490 KMQSSCFYPNCVTILSVLPACAY-LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
           +M      P+ VT +++L AC+   + S   +  H    + S+  +L     ++D  +++
Sbjct: 582 QMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRA 641

Query: 549 GNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           G +  +    + M  + D   W +L+ G  +H   H  L          L+PN   +
Sbjct: 642 GQLTEAYNFINEMPITPDAAVWGALLNGCRIHR--HVELGELAAKYVLALEPNDAGY 696


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 241/804 (29%), Positives = 404/804 (50%), Gaps = 87/804 (10%)

Query: 107 LDDAREVF--EDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKIL 164
           LD AR  F  +D    +L+ ++ +I  Y+      + + L+  M+  G+ PD + FP +L
Sbjct: 78  LDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLL 137

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
            AC        G  +H  V+K+G+     V NS++  Y +CGK+   R+ F+ M E++ V
Sbjct: 138 SACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVV 197

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           +W S+I+GY     + EA  LF +M    ++   VT   +I +  +L   ++  ++   +
Sbjct: 198 SWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYI 257

Query: 285 ESLGI-------------------------------TPDVFTWTCMISGFAQNGRTSQAL 313
             LG+                                 ++  +  ++S +  +   S  L
Sbjct: 258 SELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVL 317

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
            +  EM   G  P+ VT+ S I+AC  L  L++G   H+  ++ G      + N++I+MY
Sbjct: 318 VILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMY 377

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
            KC + EAA +VF+ + +K                                    V+TWN
Sbjct: 378 MKCGKREAACKVFEHMPNK-----------------------------------TVVTWN 402

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
            LI+G +++G+ + A  +F  M     ++R+  SWN++I    Q+     A+ +FR+MQ+
Sbjct: 403 SLIAGLVRDGDMELAWRIFDEM-----LERDLVSWNTMIGALVQVSMFEEAIELFREMQN 457

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
                + VT++ +  AC YL A +  K +   + +  +   L +  +L+D +++ G+   
Sbjct: 458 QGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSS 517

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           +  +F  M  +D+  W + I    + G    A++LF++M    +KP+   F++++ A S 
Sbjct: 518 AMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSH 577

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
            G VD G+++F S+ + + I P I HY  M+DL GR+G LEEA++ I+ MPIEP+  +W 
Sbjct: 578 GGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWG 637

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
           +LL ACR H N++LA  A E+L  L P  V I  L+  IYA  GK  D  +VR   +E  
Sbjct: 638 SLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKG 697

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSG--------- 784
            +   G   IEV+ L++ F +G   ES+++  +  L  + E +  R S +G         
Sbjct: 698 VQKVPGSSSIEVQGLIHEFTSG--DESHAENTHIGL--MLEEINCRLSEAGYVPDTTNVL 753

Query: 785 LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
           L ++E+EKE +   HSEKLA+A+ LI + Q    IR+VKN+RMC  CH  AK VS +++ 
Sbjct: 754 LDVDEQEKEHLLSRHSEKLAMAYGLITTGQGI-PIRVVKNLRMCSDCHSFAKLVSKLYNR 812

Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
           EI + D+   H FK G CSC DYW
Sbjct: 813 EITVRDNNRYHFFKEGFCSCRDYW 836



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/538 (25%), Positives = 242/538 (44%), Gaps = 66/538 (12%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVK 94
           G  ++AI +   +   G    + T+  LL AC    ++    ++H A L +  E D+FV 
Sbjct: 109 GLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVS 168

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+  YA+CG +D  R++F+ M ERN+ +W+++I  YS     +E V LFF M + G+ 
Sbjct: 169 NSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVE 228

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+      ++ AC    D E GK + S + +LGM     + N+++ +Y+KCG +  AR+ 
Sbjct: 229 PNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQI 288

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ- 273
           F+    K+ V +N+++S Y       +   + D+M ++  +   VT    I +  QLG  
Sbjct: 289 FDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDL 348

Query: 274 -------------------------CDVAMEMVKRMESLGI---TPD--VFTWTCMISGF 303
                                     D+ M+  KR  +  +    P+  V TW  +I+G 
Sbjct: 349 SVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGL 408

Query: 304 AQNGRT-------------------------------SQALDLFKEMSFVGVMPNGVTIT 332
            ++G                                  +A++LF+EM   G+  + VT+ 
Sbjct: 409 VRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMV 468

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
              SAC  L AL +   + +   K     D+ +G +L++M+S+C +  +A  VF  ++ +
Sbjct: 469 GIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKR 528

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLF 452
           DV +W + I      G    A ELF +M E  V P+ + +  L++     G+ D+   LF
Sbjct: 529 DVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLF 588

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             M K   ++ +   +  ++    + G    A+ +   +QS    PN V   S+L AC
Sbjct: 589 WSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDL---IQSMPIEPNDVVWGSLLAAC 643



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 119/230 (51%), Gaps = 1/230 (0%)

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           N LI+  +Q G  +         G +D    +   +N LI GY   G  + A+ ++ +M 
Sbjct: 63  NKLIASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQML 122

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
                P+  T   +L AC+ ++A ++  ++HG VL+  LE  + V NSLI  YA+ G + 
Sbjct: 123 VMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVD 182

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
             R +FDGM  +++++W SLI GY        A+ LF QM   G++PN  T + +I A +
Sbjct: 183 LGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVISACA 242

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
               ++LGKKV   I+E    +  I   +A++D+Y + G +  A +  ++
Sbjct: 243 KLKDLELGKKVCSYISELGMELSTI-MVNALVDMYMKCGDICAARQIFDE 291


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 227/619 (36%), Positives = 333/619 (53%), Gaps = 33/619 (5%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           LI S   L   D A+ + +  +     P++F +  +I G A+N R   ++  F  M  + 
Sbjct: 78  LISSSCSLKSLDYALSIFRCFDH----PNLFVFNALIRGLAENSRFEGSVSHFVLMLRLS 133

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           + P+ +T+   + +   L  + +G  +H   +K+G   D  V  SL++MY K  EL    
Sbjct: 134 IRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGL 193

Query: 384 RVFDMI----KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
           ++FD      K + +  WN +I G C+ G   KA  LF  M E     N  +WN LI+G+
Sbjct: 194 QLFDESPQRNKAESILLWNVLINGCCKVGDLSKAASLFEAMPER----NAGSWNSLINGF 249

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
           ++NG+ D A +LF +M +     +N  SW ++I G+ Q G    AL +F +M      PN
Sbjct: 250 VRNGDLDRARELFVQMPE-----KNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPN 304

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
            +T++S L AC  + A    + IH  +     + +  +  +L+D YAK GNI  +  +F 
Sbjct: 305 DLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFV 364

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
               KD++TW+ +I G+ +HG +  AL  F +MKS G+ P+   FL+I+ A S +G VD 
Sbjct: 365 ETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQ 424

Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
           G   F S+   Y I P ++HY+ ++DL GR+G+L+EA+ FI+ MPI PD  IW AL  AC
Sbjct: 425 GLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGALFCAC 484

Query: 680 RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFG 739
           R H NI++A L  E+L  LEP        +  +YA  G+ ED  +VR L +        G
Sbjct: 485 RAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRGVEKDPG 544

Query: 740 QCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEE 790
             +IEV+  V++FV G  +   ++ +   L    E +TA +   G           IEEE
Sbjct: 545 WSYIEVEGQVHSFVAGDHAHVRAEEISLKL----EEITASAKQEGYMPETAWVLHNIEEE 600

Query: 791 EKEEISGIHSEKLALAFALIGSSQAP-HTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
           EKE+  G HSEKLALAF LI  S AP  TIRIVKN+R+C  CH   KY S +   EI L 
Sbjct: 601 EKEDALGSHSEKLALAFGLI--STAPGSTIRIVKNLRVCGDCHSMMKYASKLSRREIILR 658

Query: 850 DSKCLHHFKNGQCSCGDYW 868
           D K  HHFK+G CSCGDYW
Sbjct: 659 DIKRFHHFKDGTCSCGDYW 677



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 239/458 (52%), Gaps = 23/458 (5%)

Query: 60  YINLLQACIDSNSIHLARKLHA--FL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           +I L+ A   SN++    ++HA  FL NL +   V   T+L+S       LD A  +F  
Sbjct: 43  FIPLIHA---SNTLPQLHQIHAQIFLHNLFSNSRVV--TQLISSSCSLKSLDYALSIFRC 97

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
               NL+ ++A+I   + + R+   V  F LM++  + PD    P +L++     D   G
Sbjct: 98  FDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLG 157

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG----VAWNSMISG 232
           + +H  V+KLG+     VR S++ +YVK G+L +  + F+   +++     + WN +I+G
Sbjct: 158 RCLHGGVMKLGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLING 217

Query: 233 YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
             ++G+  +A  LF+ M          ++N LI  + + G  D A E+  +M       +
Sbjct: 218 CCKVGDLSKAASLFEAMPERNAG----SWNSLINGFVRNGDLDRARELFVQMPE----KN 269

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           V +WT MI+GF+QNG   +AL +F  M   GV PN +T+ SA+ ACT + AL +G  IH+
Sbjct: 270 VVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHN 329

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
                GF  +  +G +L++MY+KC  +++A RVF   K KD+ +W+ MI G+   G   +
Sbjct: 330 YLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQ 389

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
           A + F+KM+ + + P+ + +  +++    +GN D+ ++ F+ M  +  ++     +  ++
Sbjct: 390 ALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIV 449

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               + G+ + AL     +QS    P+ V   ++  AC
Sbjct: 450 DLLGRAGRLDEALSF---IQSMPINPDFVIWGALFCAC 484



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 158/338 (46%), Gaps = 18/338 (5%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L++ + + G LD ARE+F  M E+N+ +W+ MI  +S++    + + +F+ M+++G+ P+
Sbjct: 245 LINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPN 304

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           D      L AC   G  + G+ +H+ +   G    R +  +++ +Y KCG +  A R F 
Sbjct: 305 DLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFV 364

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
               KD + W+ MI G+   G  D+A + F KM    I    V F  ++ + +  G  D 
Sbjct: 365 ETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINPDEVIFLAILTACSHSGNVDQ 424

Query: 277 AMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            +   + M     I P +  +T ++    + GR  +AL   + M    + P+ V   +  
Sbjct: 425 GLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMP---INPDFVIWGALF 481

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS--LINMYSKCEELEAAERVFDMIKDKD 393
            AC   K + M       A K+   +    G+   L N+Y+     E  ERV  ++K++ 
Sbjct: 482 CACRAHKNIEMA---ELTAEKLLQLEPKHPGSYVFLSNVYAAVGRWEDVERVRTLMKNRG 538

Query: 394 VY---SWNSM-IAGYCQAGYCG-----KAYELFIKMQE 422
           V     W+ + + G   +   G     +A E+ +K++E
Sbjct: 539 VEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEE 576



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 102/206 (49%), Gaps = 3/206 (1%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV 86
           T ++    NG   +A+++   +  +G +    T ++ L AC    ++ +  ++H +L+  
Sbjct: 275 TMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSN 334

Query: 87  T-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
             +++  + T L+ +YAKCG +  A  VF + + ++L TWS MI  ++    + + ++ F
Sbjct: 335 GFQLNRGIGTALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCF 394

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
             M   G+ PD+ +F  IL AC + G+ + G     S+ +   +    +    ++ +  +
Sbjct: 395 VKMKSAGINPDEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGR 454

Query: 205 CGKLIWARRFFESMD-EKDGVAWNSM 229
            G+L  A  F +SM    D V W ++
Sbjct: 455 AGRLDEALSFIQSMPINPDFVIWGAL 480



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/194 (20%), Positives = 87/194 (44%), Gaps = 18/194 (9%)

Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
           ++ +IH  +   +L S+  V+  LI +     ++ Y+ +IF      ++  +N+LI G  
Sbjct: 55  QLHQIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLA 114

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM- 636
            +  +  ++  F  M    ++P+R T   ++   S+A +VD+G      +  C     M 
Sbjct: 115 ENSRFEGSVSHFVLMLRLSIRPDRLTLPFVL--KSVAALVDVG------LGRCLHGGVMK 166

Query: 637 --IEHYS----AMIDLYGRSGKLEEAMEFIEDMPIEPDSS---IWEALLTACRIHGNIDL 687
             +E  S    +++D+Y + G+L   ++  ++ P    +    +W  L+  C   G++  
Sbjct: 167 LGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSK 226

Query: 688 AVLAIERLFDLEPG 701
           A    E + +   G
Sbjct: 227 AASLFEAMPERNAG 240


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 243/750 (32%), Positives = 383/750 (51%), Gaps = 81/750 (10%)

Query: 195 RNSV-----LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG------------ 237
           RNSV     L+ YV+ G +  A   FE+M + D   WN MI G+   G            
Sbjct: 58  RNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRM 117

Query: 238 -----------------------ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
                                  +  E  R+  K+ +  + L +   N LI  Y ++G C
Sbjct: 118 EFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIG-C 176

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
             + EMV R   +    D+ +W  MISG+   G   ++L  F+EM   G+  +  ++   
Sbjct: 177 IESAEMVFREMPV---RDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGI 233

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           + AC+    L  G EIH   ++     DV+V  SL++MY+KC  ++ AER+FD I DK +
Sbjct: 234 LGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSI 293

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESD------------VPP----NVITWNVLISG 438
            +WN+MI GY       +++    KMQE              +PP      I     + G
Sbjct: 294 VAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHG 353

Query: 439 Y-IQNGN------EDEAVDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNN 483
           + I+NG       E   VD++   GK    +        RN  SWN++IA Y + G+   
Sbjct: 354 FAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRK 413

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID 543
           A+ +F+ + +    P+  TI S+LPA A L +  + ++IHG V +  L+S+  V NS++ 
Sbjct: 414 AMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVF 473

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGT 603
            Y K GN++ +R IFD M+ KD+I+WN++I  Y +HGF   +++LF +M+  G +PN  T
Sbjct: 474 MYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGST 533

Query: 604 FLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
           F+S++L+ S+AG+V+ G + F S+   Y I P IEHY  ++DL GR+G L+ A  FIE+M
Sbjct: 534 FVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEM 593

Query: 664 PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDAL 723
           P+ P + IW +LLTA R  G+++LA +A E +  LE  +     L+  +YA  G+ ED  
Sbjct: 594 PLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVE 653

Query: 724 KVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL----QNVPENVTAR 779
           +++   ++     S G   +++ +  + FV    S++  +++Y  L    + + E+V   
Sbjct: 654 RIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGEDVYVH 713

Query: 780 SSHSGLCIEEEEKEEISG-IHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
           S       + E+K   S   HS +LA+ F LI S+   + + + KNIR+C  CH  AK +
Sbjct: 714 SLTKFRPSDLEKKRANSAKSHSLRLAICFGLI-STTIGNPVLVRKNIRICEACHRFAKRI 772

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S     EI + DSK  HHF  G CSCGDYW
Sbjct: 773 SETTKREIIVRDSKIFHHFNGGHCSCGDYW 802



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/552 (24%), Positives = 251/552 (45%), Gaps = 82/552 (14%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T+ LS Y + G + +A ++FE+MR+ + + W+ MI  +  +  + + V+ +  M   G+ 
Sbjct: 64  TRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVR 123

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            D+F +P +++ACG   D   G+ +H  VIK G+     + NS++ +Y K G +  A   
Sbjct: 124 GDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMV 183

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFD--------------------------- 247
           F  M  +D V+WNSMISGY  +G+   +   F                            
Sbjct: 184 FREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFL 243

Query: 248 --------KMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                   +M R  ++L V+    L+  Y + G+ D A  +  ++    I      W  M
Sbjct: 244 RNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIV----AWNAM 299

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVM-PNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           I G++ N ++ ++    ++M   G + P+ +T+ + +  C  L+A+ +G  +H  A++ G
Sbjct: 300 IGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNG 359

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
           F   +++  +L++MY +C +L+ AE +F  + ++++ SWN+MIA Y + G   KA  LF 
Sbjct: 360 FLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQ 419

Query: 419 KMQESDVPPNVITWNVL---------------ISGYIQN--------------------G 443
            +    + P+  T   +               I GY+                      G
Sbjct: 420 DLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCG 479

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           N   A ++F RM   D +     SWN++I  Y   G    ++ +F +M+   F PN  T 
Sbjct: 480 NLLRAREIFDRMTFKDVI-----SWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTF 534

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
           +S+L +C+     N+  E    + R  ++   +     ++D   ++GN+ +++   + M 
Sbjct: 535 VSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMP 594

Query: 563 -SKDIITWNSLI 573
            +     W SL+
Sbjct: 595 LAPTARIWGSLL 606



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 221/495 (44%), Gaps = 43/495 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG   +A+     +   G +    TY  +++AC     +    ++H   +    ++D+++
Sbjct: 104 NGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYI 163

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY-SRDQRWREVVELFFLMVQDG 152
              L+ +YAK GC++ A  VF +M  R+L +W++MI  Y S    WR  +  F  M   G
Sbjct: 164 GNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRS-LSCFREMQASG 222

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           +  D F    IL AC   G    GK +H  +++  +     V+ S++ +Y KCG++ +A 
Sbjct: 223 IKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAE 282

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR--------------------- 251
           R F+ + +K  VAWN+MI GY    ++ E+     KM                       
Sbjct: 283 RLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQL 342

Query: 252 EEIKLGVVTFNILIRS---------------YNQLGQCDVAMEMVKRMESLGITPDVFTW 296
           E I LG       IR+               Y + G+   A  +  +M       ++ +W
Sbjct: 343 EAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNE----RNLISW 398

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             MI+ + +NG   +A+ LF+++    + P+  TI S + A  +L +L    +IH    K
Sbjct: 399 NAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTK 458

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
           +    +  V NS++ MY KC  L  A  +FD +  KDV SWN++I  Y   G+   + EL
Sbjct: 459 LKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIEL 518

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F +M+E    PN  T+  L+      G  +E  + F  M ++  +      +  ++    
Sbjct: 519 FSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIG 578

Query: 477 QLGQKNNALGVFRKM 491
           + G  ++A     +M
Sbjct: 579 RTGNLDHAKNFIEEM 593



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 9/346 (2%)

Query: 51  QGAKVRRN--TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFV-KTKLLSVYAKCGCL 107
           +G K+  +  T INLL  C    +I L + +H F      +   V +T L+ +Y +CG L
Sbjct: 321 EGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKL 380

Query: 108 DDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC 167
             A  +F  M ERNL +W+AMI +Y+++   R+ + LF  +    L PD      IL A 
Sbjct: 381 KPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAY 440

Query: 168 GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
                    + +H  V KL +     V NS++ +Y KCG L+ AR  F+ M  KD ++WN
Sbjct: 441 AELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWN 500

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-S 286
           ++I  Y   G    +  LF +M  +  +    TF  L+ S +  G  +   E    M+  
Sbjct: 501 TVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRD 560

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
             I P +  + C++    + G    A +  +EM          ++ +A     D++   +
Sbjct: 561 YNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEI 620

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV-FDMIKD 391
             E H L+++   T   ++   L NMY++    E  ER+ F M K+
Sbjct: 621 AAE-HILSLEHDNTGCYVL---LSNMYAEAGRWEDVERIKFHMKKE 662



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 143/299 (47%), Gaps = 50/299 (16%)

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
           ++R    + +++  S    ++ Y + GY   A +LF  M++ D       WNV+I G++ 
Sbjct: 48  SKRNQSFLVERNSVSLTRALSSYVERGYMKNALDLFENMRQCD----TFIWNVMIRGFVD 103

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF-YPNC 500
           NG   +AVD + RM                                F  ++   F YP  
Sbjct: 104 NGLFWDAVDFYHRME-------------------------------FGGVRGDNFTYP-- 130

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
                V+ AC  L    + + +HG V++  L+  + + NSLI  YAK G I  +  +F  
Sbjct: 131 ----FVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFRE 186

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           M  +D+++WNS+I GYV  G    +L  F +M++ G+K +R + + I+ A SL G +  G
Sbjct: 187 MPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNG 246

Query: 621 KKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI--WEALL 676
           K++ C +     ++  M++  ++++D+Y + G+++ A    + +    D SI  W A++
Sbjct: 247 KEIHCQMMRSRLELDVMVQ--TSLVDMYAKCGRMDYAERLFDQI---TDKSIVAWNAMI 300


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 236/776 (30%), Positives = 370/776 (47%), Gaps = 123/776 (15%)

Query: 137 RWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRN 196
           R +E + +   M+  G      +F  +LQ C      E G+ +H+ ++K G+   R + N
Sbjct: 27  RLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLEN 86

Query: 197 SVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL 256
           ++L++Y KC                               G   +A R+FD         
Sbjct: 87  TLLSMYAKC-------------------------------GSLTDARRVFDS-------- 107

Query: 257 GVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 316
                   IR  N                       + +WT MI  F    +  +A   +
Sbjct: 108 --------IRDRN-----------------------IVSWTAMIEAFVAGNKNLEAFKCY 136

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
           + M   G  P+ VT  S ++A T+ + L +G ++H   V+ G   +  VG SL+ MY+KC
Sbjct: 137 ETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKC 196

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---- 432
            ++  A  +FD + +K+V +W  +IAGY Q G    A EL   MQ+++V PN IT+    
Sbjct: 197 GDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASIL 256

Query: 433 -------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
                                          N LI+ Y + G  +EA  LF     +D  
Sbjct: 257 QGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLF-----SDLP 311

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
            R+  +W +++ GY QLG  + A+ +FR+MQ     P+ +T  SVL +C+      + K 
Sbjct: 312 HRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKR 371

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY-VLHG 580
           IH  ++       + + ++L+  YAK G++  +  +F+ MS ++++ W ++I G    HG
Sbjct: 372 IHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHG 431

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
               AL+ FDQMK  G+KP++ TF S++ A +  G+V+ G+K F S+   Y I PM+EHY
Sbjct: 432 RCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHY 491

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
           S  +DL GR+G LEEA   I  MP  P  S+W ALL+ACR+H +++    A E +  L+P
Sbjct: 492 SCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDP 551

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
            D      +  IYA  G+ EDA KVR++  +       GQ WIEV   V+ F     S  
Sbjct: 552 DDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKSHP 611

Query: 761 YSDLLYSWLQNVPENV--------TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGS 812
            S+ +Y  L  + E +        T    H    ++EE+KE I   HSE+LA+ + L+ +
Sbjct: 612 ESEQIYVELGKLTEQIKEMGYVPDTRFVLHD---VDEEQKERILFSHSERLAITYGLMKT 668

Query: 813 SQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
                 IRIVKN+R+C  CH   K++S +   EI   D++  HHF +G CSCGD+W
Sbjct: 669 PPG-MPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRFHHFADGVCSCGDFW 723



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 163/585 (27%), Positives = 281/585 (48%), Gaps = 63/585 (10%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVT 87
           +  LC  GRL EA+ +++++  QG +V  + +  LLQ C    S+   R++HA  L    
Sbjct: 19  VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + + +++  LLS+YAKCG L DAR VF+ +R+RN+ +W+AMI A+    +  E  + +  
Sbjct: 79  QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M   G  PD   F  +L A  N    + G+ +H  +++ G+    RV  S++ +Y KCG 
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGD 198

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------ 261
           +  AR  F+ + EK+ V W  +I+GY Q G+ D A  L + M + E+    +TF      
Sbjct: 199 ISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQG 258

Query: 262 -----------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
                                        N LI  Y + G     +E  +++ S     D
Sbjct: 259 CTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCG----GLEEARKLFSDLPHRD 314

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           V TWT M++G+AQ G   +A++LF+ M   G+ P+ +T TS +++C+    L  G  IH 
Sbjct: 315 VVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQ 374

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC-QAGYCG 411
             V  G+  DV + ++L++MY+KC  ++ A  VF+ + +++V +W ++I G C Q G C 
Sbjct: 375 QLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCR 434

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
           +A E F +M++  + P+ +T+  ++S     G  +E    F+ M  +  +K     ++  
Sbjct: 435 EALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCF 494

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR--R 529
           +    + G    A  V   M    F P      ++L AC           +H  V R  R
Sbjct: 495 VDLLGRAGHLEEAENVILSMP---FIPGPSVWGALLSAC----------RVHSDVERGER 541

Query: 530 SLESSLPV-------MNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
           + E+ L +         +L   YA +G    +  +   M  +D++
Sbjct: 542 AAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVV 586



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 208/429 (48%), Gaps = 41/429 (9%)

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
           +++E+L  + DV       S   + GR  +AL +   M   G           +  C  L
Sbjct: 8   RKVETLANSRDV-------SVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARL 60

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
           ++L  G E+H+  +K G   +  + N+L++MY+KC  L  A RVFD I+D+++ SW +MI
Sbjct: 61  RSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMI 120

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY----------------IQNGNE 445
             +       +A++ +  M+ +   P+ +T+  L++ +                ++ G E
Sbjct: 121 EAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLE 180

Query: 446 DEA------VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            E       V ++ + G   K +        +N  +W  LIAGY Q GQ + AL +   M
Sbjct: 181 LEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETM 240

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
           Q +   PN +T  S+L  C    A    K++H  +++      L V+NSLI  Y K G +
Sbjct: 241 QQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGL 300

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             +R +F  +  +D++TW +++ GY   GF   A++LF +M+  G+KP++ TF S++ + 
Sbjct: 301 EEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSC 360

Query: 612 SLAGMVDLGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSS 670
           S    +  GK++   +    Y +   ++  SA++ +Y + G +++A      M  E +  
Sbjct: 361 SSPAFLQEGKRIHQQLVHAGYNLDVYLQ--SALVSMYAKCGSMDDASLVFNQMS-ERNVV 417

Query: 671 IWEALLTAC 679
            W A++T C
Sbjct: 418 AWTAIITGC 426


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 221/648 (34%), Positives = 346/648 (53%), Gaps = 71/648 (10%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEM--SFVGVMPNGVTITSAISACTDLKALAMGM 348
           P+ FTW  +I  +A       ++  F +M  S     PN  T    I A  ++ +L++G 
Sbjct: 94  PNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 153

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
            +H +A+K     DV V NSLI+ Y  C +L++A +VF  IK+KDV SWNSMI G+ Q G
Sbjct: 154 SLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 213

Query: 409 YCGKAYELFIKMQ-----------------------------------ESDVPPNVITWN 433
              KA ELF KM+                                   E+ V  N+   N
Sbjct: 214 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLAN 273

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKV--------------------------KRNTAS 467
            ++  Y + G+ ++A  LF  M + D V                          K++  +
Sbjct: 274 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVA 333

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQ-SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           WN+LI+ Y+Q G+ N AL VF ++Q       N +T++S L ACA + A    + IH  +
Sbjct: 334 WNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYI 393

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
            +  ++ +  V ++LI  Y+K G++  +R +F+ +  +D+  W+++I G  +HG    A+
Sbjct: 394 KKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAV 453

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
           D+F +M+   +KPN  TF ++  A S  G+VD  + +F  +   Y I+P  +HY+ ++D+
Sbjct: 454 DMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDV 513

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GRSG LE+A++FIE MPI P +S+W ALL AC+IH N+ LA +A  RL +LEP +    
Sbjct: 514 LGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAH 573

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
            L+  IYA  GK ++  ++RK  R    +   G   IE+  +++ F++G  +   S+ +Y
Sbjct: 574 VLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVY 633

Query: 767 SWLQNVPENVTARS-----SHSGLCIEEEE-KEEISGIHSEKLALAFALIGSSQAPHTIR 820
             L  V E + +       SH    IEEEE KE+   +HSEKLA+ + LI S++AP  IR
Sbjct: 634 GKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLI-STEAPKAIR 692

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           ++KN+RMC  CH  AK +S +++ EI + D    HHF+NGQCSC D+W
Sbjct: 693 VIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740



 Score =  195 bits (496), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 218/468 (46%), Gaps = 71/468 (15%)

Query: 56  RRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYA--KCGCLDDARE 112
           R    I+L+  C   +S+   ++ HA +       D +  +KL ++ A      L+ AR+
Sbjct: 30  RSRHTISLIDRC---SSLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARK 86

Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV--QDGLFPDDFLFPKILQACGNC 170
           VF+++ + N +TW+ +I AY+        +  F  MV  +   +P+ + FP +++A    
Sbjct: 87  VFDEIPQPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEV 146

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
                G+ +H + IK  +     V NS++  Y  CG L  A + F ++ EKD V+WNSMI
Sbjct: 147 SSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMI 206

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------------------------- 261
           +G+ Q G  D+A  LF KM  E++K   VT                              
Sbjct: 207 NGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVN 266

Query: 262 ------NILIRSYNQLGQCDVAMEMVKRMES-------------------------LGIT 290
                 N ++  Y + G  + A  +   ME                          L   
Sbjct: 267 VNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAM 326

Query: 291 P--DVFTWTCMISGFAQNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMG 347
           P  D+  W  +IS + QNG+ ++AL +F E+     +  N +T+ S +SAC  + AL +G
Sbjct: 327 PKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELG 386

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
             IHS   K G   +  V ++LI+MYSKC +LE A  VF+ ++ +DV+ W++MI G    
Sbjct: 387 RWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMH 446

Query: 408 GYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           G   +A ++F KMQE++V PN +T+  +       G  DEA  LF +M
Sbjct: 447 GCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKM 494



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 99/187 (52%), Gaps = 3/187 (1%)

Query: 35  NGRLNEAITVLDSIATQ-GAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVF 92
           NG+ NEA+ V   +  Q   K+ + T ++ L AC    ++ L R +H+++     +++ +
Sbjct: 344 NGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFY 403

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V + L+ +Y+KCG L+ AREVF  + +R+++ WSAMIG  +      E V++F+ M +  
Sbjct: 404 VTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEAN 463

Query: 153 LFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           + P+   F  +  AC + G   EA  L + +    G+    +    ++ V  + G L  A
Sbjct: 464 VKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKA 523

Query: 212 RRFFESM 218
            +F E+M
Sbjct: 524 VKFIEAM 530


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 233/713 (32%), Positives = 379/713 (53%), Gaps = 68/713 (9%)

Query: 196 NSVLAVYVKCGKLIWARRFFES--MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
            S ++ Y + G +  AR+ F++  + ++   +WN+M+S YF+  +  +A  LFD+M +  
Sbjct: 23  TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRN 82

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
                V+FN +I  Y + G    A ++   M       +V +WT M+ G+ Q G   +A 
Sbjct: 83  ----TVSFNGMISGYVKNGMVADARKVFDVMPER----NVVSWTSMVRGYVQEGMVEEAE 134

Query: 314 DLFKEMSFVGVMPNGVTITSAI--SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
            LF EM    V+   V I   +  S   D K L            M    DV+V  ++I 
Sbjct: 135 KLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKL----------FDMIPEKDVVVVTNMIG 184

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
            Y +   L+ A  +FD +K ++V++W +M++GY + G    A +LF  M E     N ++
Sbjct: 185 GYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPER----NEVS 240

Query: 432 WNVLISGYIQNGNEDEAVDLFQRM------------------GKNDKVK--------RNT 465
           W  ++ GY Q+G   EA +LF+ M                  G+  + +        R+ 
Sbjct: 241 WTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDE 300

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
            +WN++I  +++ G    ALG+F +MQ      N  +++SVL  CA L + +  +++H  
Sbjct: 301 GTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHAR 360

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
           ++R   +  L V + LI  Y K G++V ++ IF+    KD++ WNS+I GY  HG    A
Sbjct: 361 LVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEA 420

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           L++F  M S G++P+  TF+ ++ A S +G V  G ++F ++   YQ+ P IEHY+ M+D
Sbjct: 421 LNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVD 480

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           L GR+G+++EAME +E MP+EPD+ +W ALL ACR H  +DLA +A+E+L  LEP +   
Sbjct: 481 LLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGP 540

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC-WIEVKNLVYTFVTGGWSESYSDL 764
             L+  +YA  G+  D   +RK  + N R   F  C WIEV+  V+ F TGG S+S+ + 
Sbjct: 541 YVLLSHMYATKGRWRDVEVLRK--KINRRVIKFPGCSWIEVEKKVHMF-TGGDSKSHPE- 596

Query: 765 LYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQA 815
               +  + E ++     +G C         ++EEEK    G HSE+LA+A+ L+   + 
Sbjct: 597 -QHMITQMLEKLSGFLREAGYCPDGSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVPEG 655

Query: 816 PHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              IR++KN+R+C  CH   K ++ +   EI L D+   HHFK+G CSC D+W
Sbjct: 656 -MPIRVMKNLRVCGDCHSAIKLIAKVTGREIILRDANRFHHFKDGSCSCKDFW 707



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 225/462 (48%), Gaps = 34/462 (7%)

Query: 56  RRNT--YINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREV 113
           +RNT  +  ++   + +  +  ARK+    +++ E +V   T ++  Y + G +++A ++
Sbjct: 80  QRNTVSFNGMISGYVKNGMVADARKV---FDVMPERNVVSWTSMVRGYVQEGMVEEAEKL 136

Query: 114 FEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF 173
           F +M  RN+ +W+ MIG   ++ R  +  +LF       + P+  +        G C   
Sbjct: 137 FWEMPRRNVVSWTVMIGGLLKESRIDDAKKLF------DMIPEKDVVVVTNMIGGYC--- 187

Query: 174 EAGKLMHSLVIKLGMSCVRRVRN-----SVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
           + G+L  +  +   M    +VRN     ++++ Y K G++  AR+ FE M E++ V+W +
Sbjct: 188 QVGRLDEARELFDEM----KVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTA 243

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
           M+ GY Q G   EA  LF+ M  + I    V  N +I  +   G+   A  M + M+   
Sbjct: 244 MLMGYTQSGRMKEAFELFEAMPVKWI----VACNEMILQFGLAGEMHRARMMFEGMKER- 298

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
              D  TW  MI  F + G   +AL LF  M   GV  N  ++ S +S C  L +L  G 
Sbjct: 299 ---DEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGR 355

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           ++H+  V+  F  D+ V + LI MY KC +L  A+ +F+    KDV  WNSMI GY Q G
Sbjct: 356 QVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHG 415

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
              +A  +F  M  S V P+ +T+  ++S    +G   E  ++F+ M    +V+     +
Sbjct: 416 LGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHY 475

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             ++    + G+ + A+ +  KM      P+ +   ++L AC
Sbjct: 476 ACMVDLLGRAGRVDEAMELVEKMPME---PDAIVWGALLGAC 514



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 144/551 (26%), Positives = 236/551 (42%), Gaps = 134/551 (24%)

Query: 95  TKLLSVYAKCGCLDDAREVFED--MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           T  +S Y + G + +AR+VF++  + +R + +W+AM+ AY    + R+ + LF  M Q  
Sbjct: 23  TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQR- 81

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
                           N   F                      N +++ YVK G +  AR
Sbjct: 82  ----------------NTVSF----------------------NGMISGYVKNGMVADAR 103

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI------------------ 254
           + F+ M E++ V+W SM+ GY Q G  +EA +LF +M R  +                  
Sbjct: 104 KVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDD 163

Query: 255 ---------KLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ 305
                    +  VV    +I  Y Q+G+ D A E+   M+      +VFTWT M+SG+A+
Sbjct: 164 AKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMK----VRNVFTWTTMVSGYAK 219

Query: 306 NGRTSQALDLFKEMSFVGVMP--NGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDD 362
           NGR   A  LF+      VMP  N V+ T+ +   T    +    E+  ++ VK      
Sbjct: 220 NGRVDVARKLFE------VMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKW----- 268

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           ++  N +I  +    E+  A  +F+ +K++D  +WN+MI  + + G   +A  LF +MQ 
Sbjct: 269 IVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQR 328

Query: 423 SDVP---PNVIT--------------------------------WNVLISGYIQNGNEDE 447
             V    P++I+                                 +VLI+ Y++ G+   
Sbjct: 329 EGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVR 388

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           A  +F R      + ++   WNS+I GY Q G    AL VF  M SS   P+ VT + VL
Sbjct: 389 AKGIFNRF-----LFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVL 443

Query: 508 PACAYLVASNKVKE----IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS- 562
            AC+Y   S KVKE             +E  +     ++D   ++G +  +  + + M  
Sbjct: 444 SACSY---SGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPM 500

Query: 563 SKDIITWNSLI 573
             D I W +L+
Sbjct: 501 EPDAIVWGALL 511



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 193/415 (46%), Gaps = 53/415 (12%)

Query: 56  RRN--TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREV 113
           RRN  ++  ++   +  + I  A+KL    +++ E DV V T ++  Y + G LD+ARE+
Sbjct: 142 RRNVVSWTVMIGGLLKESRIDDAKKL---FDMIPEKDVVVVTNMIGGYCQVGRLDEAREL 198

Query: 114 FEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF 173
           F++M+ RN++TW+ M+  Y+++ R     +LF +M +     ++  +  +L      G  
Sbjct: 199 FDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPER----NEVSWTAMLMGYTQSGRM 254

Query: 174 -EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISG 232
            EA +L  ++ +K  ++C     N ++  +   G++  AR  FE M E+D   WN+MI  
Sbjct: 255 KEAFELFEAMPVKWIVAC-----NEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKV 309

Query: 233 YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-------- 284
           + + G + EA  LF +M RE + L   +   ++     L   D   ++  R+        
Sbjct: 310 FERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQD 369

Query: 285 ---ESLGIT--------------------PDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
               S+ IT                     DV  W  MI+G++Q+G   +AL++F +M  
Sbjct: 370 LYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCS 429

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN--SLINMYSKCEEL 379
            GV P+ VT    +SAC+    +  G EI   A+K  +  +  + +   ++++  +   +
Sbjct: 430 SGVQPDEVTFIGVLSACSYSGKVKEGFEIFE-AMKCTYQVEPGIEHYACMVDLLGRAGRV 488

Query: 380 -EAAERVFDMIKDKDVYSWNSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVI 430
            EA E V  M  + D   W +++     + +      A E   K++  +  P V+
Sbjct: 489 DEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVL 543



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 15/225 (6%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKL 97
           EA+ +   +  +G  +   + I++L  C    S+   R++HA L + +E   D++V + L
Sbjct: 318 EALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARL-VRSEFDQDLYVASVL 376

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           +++Y KCG L  A+ +F     +++  W++MI  YS+     E + +F  M   G+ PD+
Sbjct: 377 ITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDE 436

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV------LAVYVKCGKLIWA 211
             F  +L AC       +GK+     I   M C  +V   +      + +  + G++  A
Sbjct: 437 VTFIGVLSACSY-----SGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEA 491

Query: 212 RRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
               E M  E D + W +++       + D A    +K+ + E K
Sbjct: 492 MELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPK 536


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 255/907 (28%), Positives = 431/907 (47%), Gaps = 88/907 (9%)

Query: 40   EAITVLDSIATQGAKVRRNTYINLLQACIDSNSI-HLARKLHAFLNLVTEI-DVFVKTKL 97
            E +     +   G K       +L+ AC  S S+     ++H F+     + DV+V T +
Sbjct: 142  EGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAI 201

Query: 98   LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
            L +Y   G +  +R+VFE+M +RN+ +W++++  YS      EV++++  M  +G+  ++
Sbjct: 202  LHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNE 261

Query: 158  FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
                 ++ +CG   D   G+ +   VIK G+     V NS+++++   G + +A   F  
Sbjct: 262  NSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQ 321

Query: 218  MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE------------------------ 253
            + E+D ++WNS+++ Y Q G  +E+ R+F+ M R                          
Sbjct: 322  ISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWG 381

Query: 254  -------IKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
                   +K+G    V   N L+R Y   G+ + A  + K+M     T D+ +W  +++ 
Sbjct: 382  RGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMP----TKDLISWNSLMAS 437

Query: 303  FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
            F  +GR+  AL +   M   G   N VT TSA++AC   +    G  +H L V  G  D+
Sbjct: 438  FVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDN 497

Query: 363  VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
             ++GN+L++MY K   +  + RV   +  +DV +WN++I GY +     KA   F  ++ 
Sbjct: 498  QIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRV 557

Query: 423  SDVPPNVITW------------------------------------NVLISGYIQNGNED 446
              V  N IT                                     N LI+ Y + G+  
Sbjct: 558  EGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLS 617

Query: 447  EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
             + DLF     N    R+  +WN+++A     G     L +  KM+S     +  +    
Sbjct: 618  SSQDLF-----NGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEG 672

Query: 507  LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
            L A A L    + +++HG  ++   E    + N+  D Y+K G I     +     ++ +
Sbjct: 673  LSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSL 732

Query: 567  ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
             +WN LI     HG++    + F +M   G+KP   TF+S++ A S  G+VD G   +  
Sbjct: 733  PSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDM 792

Query: 627  ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
            I + + + P IEH   +IDL GRSG+L EA  FI  MP++P+  +W +LL +C+IH ++D
Sbjct: 793  IAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLD 852

Query: 687  LAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
                A E L  LEP D  +  L   ++A  G+ ED   VRK       +      W+++K
Sbjct: 853  RGRKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLK 912

Query: 747  NLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSE 801
            + V +F  G  +   +  +Y+ L+++ + +      A +S +    +EE+KE     HSE
Sbjct: 913  DKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSE 972

Query: 802  KLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQ 861
            +LALA+AL+ + +   T+RI KN+R+C  CH   K+VS +    I L D    HHF++G 
Sbjct: 973  RLALAYALMSTPEGS-TVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFESGL 1031

Query: 862  CSCGDYW 868
            CSC DYW
Sbjct: 1032 CSCKDYW 1038



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 126/510 (24%), Positives = 227/510 (44%), Gaps = 50/510 (9%)

Query: 226 WNSMISGYFQIG----ENDEAHRLFDKMC-REEIKLGVVTFNILIRSYNQLGQCDVAMEM 280
           WN  +S + Q G      +   R    +C +  ++L V+  N LI  Y + G+   A  +
Sbjct: 56  WNPELSCFDQTGFSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYL 115

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
             +M       +  +W  M+SG  + G   + ++ F++M  +G+ P+   I S ++AC  
Sbjct: 116 FDKMP----VRNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGR 171

Query: 341 LKAL-AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
             ++   G+++H    K G   DV V  +++++Y     +  + +VF+ + D++V SW S
Sbjct: 172 SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTS 231

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG----------------YIQNG 443
           ++ GY   G   +  +++  M+   V  N  + +++IS                  I++G
Sbjct: 232 LMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSG 291

Query: 444 ------NEDEAVDLFQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKNNALGVFR 489
                  E+  + +F  MG  D          +R+T SWNS++A Y Q G    +  +F 
Sbjct: 292 LESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFN 351

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
            M+      N  T+ ++L     +      + IHG V++   +S + V N+L+  YA +G
Sbjct: 352 LMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 411

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
               +  +F  M +KD+I+WNSL+  +V  G    AL +   M   G   N  TF S + 
Sbjct: 412 RSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALA 471

Query: 610 AHSLAGMVDLGK----KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
           A       D G+     V  S     QII      +A++ +YG+ G +  +   +  MP 
Sbjct: 472 ACFSPEFFDKGRILHGLVVVSGLFDNQIIG-----NALVSMYGKIGGMSTSRRVLLQMP- 525

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIERL 695
             D   W AL+     + + D A+ A + L
Sbjct: 526 RRDVVAWNALIGGYAENEDPDKALAAFQTL 555



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/475 (21%), Positives = 199/475 (41%), Gaps = 42/475 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFV 93
           +GR  +A+ +L S+   G  V   T+ + L AC         R LH  + +    D   +
Sbjct: 441 DGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQII 500

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+S+Y K G +  +R V   M  R++  W+A+IG Y+ ++   + +  F  +  +G+
Sbjct: 501 GNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGV 560

Query: 154 FPDDFLFPKILQACGNCGD-FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             +      +L AC   GD  E GK +H+ ++  G      V+NS++ +Y KCG L  ++
Sbjct: 561 SANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQ 620

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
             F  +D +  + WN++++     G  +E  +L  KM    + L   +F+  + +  +L 
Sbjct: 621 DLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLA 680

Query: 273 QCDVAMEMVKRMESLGITPDVF-------------------------------TWTCMIS 301
             +   ++      LG   D F                               +W  +IS
Sbjct: 681 VLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILIS 740

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK-MGFT 360
              ++G   +  + F EM  +G+ P  VT  S ++AC+    +  G+  + +  K  G  
Sbjct: 741 ALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLE 800

Query: 361 DDVLVGNSLINMYSKCEELEAAER-VFDMIKDKDVYSWNSMIAG---YCQAGYCGKAYEL 416
             +     +I++  +   L  AE  +  M    +   W S++A    +       KA E 
Sbjct: 801 PAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAEN 860

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
             K++  D    V++ N+    +   G  ++  ++ ++MG  +  K+   SW  L
Sbjct: 861 LSKLEPEDDSVFVLSSNM----FATTGRWEDVENVRKQMGFKNIKKKQACSWVKL 911



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/313 (23%), Positives = 151/313 (48%), Gaps = 27/313 (8%)

Query: 397 WNSMIAGYCQAGY-------CGKA-YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           WN  ++ + Q G+        G+A + L +K     V  +V+  N LI+ Y + G    A
Sbjct: 56  WNPELSCFDQTGFSQITRETTGRALHALCVK---GLVRLSVLHTNTLINMYTKFGRVKPA 112

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
             LF +M       RN  SWN++++G  ++G     +  F+KM      P+   I S++ 
Sbjct: 113 RYLFDKMPV-----RNEVSWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVT 167

Query: 509 ACAYLVASNKVKE---IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           AC    + +  +E   +HG V +  L S + V  +++  Y   G +  SR +F+ M  ++
Sbjct: 168 ACGR--SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRN 225

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
           +++W SL+ GY   G     +D++  M+  G++ N  +   +I +  L     LG+++  
Sbjct: 226 VVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIG 285

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
            + +   +   +   +++I ++G  G ++ A  +I +   E D+  W +++ A   +G+I
Sbjct: 286 QVIKS-GLESKLAVENSLISMFGNMGNVDYA-NYIFNQISERDTISWNSIVAAYAQNGHI 343

Query: 686 DLAVLAIERLFDL 698
           + +     R+F+L
Sbjct: 344 EES----SRIFNL 352


>gi|347954468|gb|AEP33734.1| chlororespiratory reduction 21, partial [Lepidium virginicum]
          Length = 788

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 222/754 (29%), Positives = 394/754 (52%), Gaps = 44/754 (5%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-- 89
           LC +G + EA+ ++  +  +  ++    Y  +LQ C+    +   +++HA +    +   
Sbjct: 5   LCKHGEIREALRLVKEMEFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGDFYA 64

Query: 90  -DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            + +++TKLL  YAKC  ++ A+ +F  +R RN+++W+A+IG   R       +  F  M
Sbjct: 65  RNQYIETKLLIFYAKCDAIEVAQNLFSRLRVRNVFSWAAIIGLKCRIGLCEGALTGFVEM 124

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           +++G+ PD+++ P + +ACG       G+ +H  ++K G+     V +S+  +Y KCG L
Sbjct: 125 IENGVLPDNYVVPNVCKACGALQWTWFGRGVHGYLVKAGLHDCVFVASSLADMYGKCGVL 184

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------- 261
             AR+ F+ + E++ VAWN+++ GY Q G N+EA RL   M +E I+   VT        
Sbjct: 185 NDARKVFDKIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCLSAS 244

Query: 262 ------------------------NILIRS----YNQLGQCDVAMEMVKRMESLGITPDV 293
                                   NIL  S    Y ++G  + A  +  RM    I  DV
Sbjct: 245 ANIRGIEEGKQSHAIAIVNGLEMDNILGTSILNFYCKVGLVEYAEMIFDRM----IEKDV 300

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            TW  +ISG+ Q G    A+ + K M    +  + VT+++ +SA      L +G E+   
Sbjct: 301 VTWNLLISGYVQQGLVDDAIHMCKLMRLENLRYDSVTLSTLMSAAARTHNLKLGKEVQCY 360

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            ++  F  ++++ ++ ++MY+KC  +  A++VFD   +KD+  WN+++A Y  +G  G+A
Sbjct: 361 CIRHCFESEIVLASTAVDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYADSGLSGEA 420

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
             LF  MQ   VPPN+ITWN +I   ++NG  DEA ++F +M ++  +  N  SW +++ 
Sbjct: 421 LRLFYDMQLESVPPNMITWNSIILSLLRNGQVDEAKEMFLQM-QSSGIFPNLISWTTMMN 479

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLE 532
           G  Q G    A+   RKMQ S   PN  +I   L ACA+L + N  + IHG ++R     
Sbjct: 480 GLVQNGCSEEAINFLRKMQESGLRPNSFSITVALSACAHLASLNFGRSIHGYIIRNLQHS 539

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
           SS+  + SL+D YAK G+I  +   F      ++  +N++I  Y L+G    A+ L+ ++
Sbjct: 540 SSVSFVTSLVDMYAKCGDINQAEKAFGSKLYDELPLYNAMISAYALYGNMKEAIALYRRL 599

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
           +   +KP+  TF S++ A S AG +     +F  +   + + P +EHY  M+DL   SG+
Sbjct: 600 EDMAIKPDSITFTSLLSACSHAGDIVQAINIFTEMVSKHGMKPCLEHYGLMVDLLASSGE 659

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQI 712
             +A+E I++MP +PD+ + ++L+ +       +L     ++L + EP +      I   
Sbjct: 660 TNKALELIKEMPYKPDARMIQSLVASNNKQHKTELVDYLSKQLLESEPENSGNYVTISNA 719

Query: 713 YAICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
           +AI G  ++ +K+R++ +    +   G  WI++K
Sbjct: 720 FAIEGSWDEVVKMREMMKAKGLKKKPGCSWIQIK 753



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 201/433 (46%), Gaps = 39/433 (9%)

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG- 358
           +S   ++G   +AL L KEM F  V          +  C   + L  G +IH+  +K G 
Sbjct: 2   VSSLCKHGEIREALRLVKEMEFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNGD 61

Query: 359 -FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            +  +  +   L+  Y+KC+ +E A+ +F  ++ ++V+SW ++I   C+ G C  A   F
Sbjct: 62  FYARNQYIETKLLIFYAKCDAIEVAQNLFSRLRVRNVFSWAAIIGLKCRIGLCEGALTGF 121

Query: 418 IKMQESDV-PPNVITWNVL--------------ISGYIQNGNEDEAV-------DLFQRM 455
           ++M E+ V P N +  NV               + GY+      + V       D++ + 
Sbjct: 122 VEMIENGVLPDNYVVPNVCKACGALQWTWFGRGVHGYLVKAGLHDCVFVASSLADMYGKC 181

Query: 456 GK-NDKVK-------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           G  ND  K       RN  +WN+L+ GY Q G    A+ +   M+     P  VT+ + L
Sbjct: 182 GVLNDARKVFDKIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTCL 241

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
            A A +    + K+ H   +   LE    +  S+++ Y K G + Y+  IFD M  KD++
Sbjct: 242 SASANIRGIEEGKQSHAIAIVNGLEMDNILGTSILNFYCKVGLVEYAEMIFDRMIEKDVV 301

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC-S 626
           TWN LI GYV  G    A+ +   M+   L+ +  T  +++ A +    + LGK+V C  
Sbjct: 302 TWNLLISGYVQQGLVDDAIHMCKLMRLENLRYDSVTLSTLMSAAARTHNLKLGKEVQCYC 361

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
           I  C++    I   S  +D+Y + G + +A +   D  +E D  +W  LL A   + +  
Sbjct: 362 IRHCFE--SEIVLASTAVDMYAKCGSIVDAKKVF-DSTVEKDLILWNTLLAA---YADSG 415

Query: 687 LAVLAIERLFDLE 699
           L+  A+   +D++
Sbjct: 416 LSGEALRLFYDMQ 428



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 3/165 (1%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--N 84
           T ++ L  NG   EAI  L  +   G +    +    L AC    S++  R +H ++  N
Sbjct: 476 TMMNGLVQNGCSEEAINFLRKMQESGLRPNSFSITVALSACAHLASLNFGRSIHGYIIRN 535

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
           L     V   T L+ +YAKCG ++ A + F       L  ++AMI AY+     +E + L
Sbjct: 536 LQHSSSVSFVTSLVDMYAKCGDINQAEKAFGSKLYDELPLYNAMISAYALYGNMKEAIAL 595

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGM 188
           +  +    + PD   F  +L AC + GD  +A  +   +V K GM
Sbjct: 596 YRRLEDMAIKPDSITFTSLLSACSHAGDIVQAINIFTEMVSKHGM 640


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 248/787 (31%), Positives = 387/787 (49%), Gaps = 120/787 (15%)

Query: 126 SAMIGAYSRDQRWREVVELF--FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
           + +I A+SR    R    L    L       PD F FP +++A  +  +  A +L H+  
Sbjct: 37  NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPS--NASAAQL-HACA 93

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
           ++LG+     VR SV                F S          S++  Y + G   EA+
Sbjct: 94  LRLGL-----VRPSV----------------FTS---------GSLVHAYLRFGRISEAY 123

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
           ++FD+M                                          DV  W  M+SG 
Sbjct: 124 KVFDEMSER---------------------------------------DVPAWNAMLSGL 144

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
            +N R ++A+ LF  M   GV  + VT++S +  C  L    + + +H  AVK G   ++
Sbjct: 145 CRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGLDKEL 204

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
            V N+LI++Y K   LE A+ VF  ++ +D+ +WNS+I+G  Q G    A ++F  M+ S
Sbjct: 205 FVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGS 264

Query: 424 DVPPNVITWNVLISGYIQNGNEDEA-----------------------VDLFQRMGKNDK 460
            V P+V+T   L S   Q G+   A                       VD++ ++   + 
Sbjct: 265 GVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEA 324

Query: 461 VKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQS-SCFYPNCVTILSVLPACA 511
            +R        ++ SWN+LI GY Q G  N A+  +  MQ          T +SVLPA +
Sbjct: 325 AQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYS 384

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
           +L A  +   +H   ++  L   + V   LID YAK G +  +  +F+ M  +    WN+
Sbjct: 385 HLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNA 444

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
           +I G  +HG    AL LF +M+  G+KP+  TF+S++ A S AG+VD G+  F  +   Y
Sbjct: 445 IISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTY 504

Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
            I+P+ +HY+ M D+ GR+G+L+EA  FI++MPI+PDS++W ALL ACRIHGN+++  +A
Sbjct: 505 DIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVA 564

Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
            + LF+L+P +V    L+  +YA  GK +   +VR L R    + + G   IEVK  V  
Sbjct: 565 SQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSIEVKRSVNV 624

Query: 752 FVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEK 802
           F +G  +E +    +  +Q    ++ A+    G           +E++EKE I   HSE+
Sbjct: 625 FYSGNQTEPHPQ--HEEIQAELRSLLAKIRSVGYVSDYSFVLQDVEDDEKEHILNNHSER 682

Query: 803 LALAFALIGS-SQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQ 861
           LA+AF +I + S+ P  + I KN+R+C  CH   KY+S +   EI + DS   HHFK+G 
Sbjct: 683 LAIAFGIINTPSRTP--LHIYKNLRVCGDCHNATKYISQITEREIIVRDSNRFHHFKDGH 740

Query: 862 CSCGDYW 868
           CSCGD+W
Sbjct: 741 CSCGDFW 747



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 223/492 (45%), Gaps = 51/492 (10%)

Query: 59  TYINLLQACIDSNSIHLARKLHA---FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           T+ +L++A   + S   A +LHA    L LV    VF    L+  Y + G + +A +VF+
Sbjct: 72  TFPSLIRAAPSNAS---AAQLHACALRLGLVRP-SVFTSGSLVHAYLRFGRISEAYKVFD 127

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
           +M ER++  W+AM+    R+ R  E V LF  MV +G+  D      +L  C   GD   
Sbjct: 128 EMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVL 187

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
             +MH   +K G+     V N+++ VY K G L  A+  F  M+ +D V WNS+ISG  Q
Sbjct: 188 ALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQ 247

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTF---------------------------------- 261
            G+   A ++F  M    +   V+T                                   
Sbjct: 248 RGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDII 307

Query: 262 --NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
             N ++  Y +L   + A  M   M       D  +W  +I+G+ QNG  ++A++ +  M
Sbjct: 308 AGNAIVDMYAKLSNIEAAQRMFDSMP----VQDSVSWNTLITGYMQNGLANEAVERYGHM 363

Query: 320 S-FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
               G+     T  S + A + L AL  GM +H+L++K+G   DV VG  LI++Y+KC +
Sbjct: 364 QKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGK 423

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           L  A  +F+ +  +    WN++I+G    G+  +A  LF +MQ+  + P+ +T+  L++ 
Sbjct: 424 LAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAA 483

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
               G  D+    F  M     +      +  +     + GQ + A   F  +Q+    P
Sbjct: 484 CSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEA---FNFIQNMPIKP 540

Query: 499 NCVTILSVLPAC 510
           +     ++L AC
Sbjct: 541 DSAVWGALLGAC 552



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 203/449 (45%), Gaps = 43/449 (9%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVT 87
           L  LC N R  EA+ +   +  +G      T  ++L  C+      LA  +H + +    
Sbjct: 141 LSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVYAVKHGL 200

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + ++FV   L+ VY K G L++A+ VF  M  R+L TW+++I    +  +    +++F  
Sbjct: 201 DKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQG 260

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR-NSVLAVYVKCG 206
           M   G+ PD      +  A    GD  + K +H  V++ G      +  N+++ +Y K  
Sbjct: 261 MRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLS 320

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-IKLGVVTFNILI 265
            +  A+R F+SM  +D V+WN++I+GY Q G  +EA   +  M + E +K    TF  ++
Sbjct: 321 NIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVL 380

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
            +Y+ LG     M M      +G+  DV+  TC+I  +A+ G+ ++A+ LF++M      
Sbjct: 381 PAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTG 440

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P    I+              G+ +H              G   + ++S+ ++       
Sbjct: 441 PWNAIIS--------------GLGVHGH------------GAEALTLFSRMQQ------- 467

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES-DVPPNVITWNVLISGYIQNGN 444
            + IK  D  ++ S++A    AG   +    F  MQ + D+ P    +  +     + G 
Sbjct: 468 -EGIK-PDHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQ 525

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            DEA +  Q M     +K ++A W +L+ 
Sbjct: 526 LDEAFNFIQNM----PIKPDSAVWGALLG 550


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 238/772 (30%), Positives = 381/772 (49%), Gaps = 77/772 (9%)

Query: 166 ACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA 225
           A   C D E+ + +H  +     + V  + N ++  Y KCG +  AR  F+++  K+  +
Sbjct: 33  ALRQCQDLESVRQIHDRISGAASANVF-LGNEIVRAYGKCGSVASARVAFDAIARKNDYS 91

Query: 226 WNSMISGYFQIGENDEAHRLFDKM--------------------CREE------------ 253
           W SM++ Y Q G    A  L+ +M                      EE            
Sbjct: 92  WGSMLTAYAQNGHYRAALDLYKRMDLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTK 151

Query: 254 -IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
            +KL V+  N L+  Y + G  + A  + +RM        V +W  MI+ +AQ+G   +A
Sbjct: 152 GLKLDVILENSLLTMYAKCGSLEDAKRLFERMSG---RRSVSSWNAMIAAYAQSGHFEEA 208

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
           + L+++M    V P+  T TS +SAC++L  L  G +IH+L    G   D+ + N+L+ M
Sbjct: 209 IRLYEDMD---VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTM 265

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y++C+ L+ A ++F  +  +DV SW++MIA + +     +A E + KMQ   V PN  T+
Sbjct: 266 YARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTF 325

Query: 433 ---------------------NVLISGY-IQNGNEDEAVDLFQRMGKNDKVK-------- 462
                                 +L +GY I   N    VDL+   G  D+ +        
Sbjct: 326 ASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIEN 385

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS-VLPACAYLVASNKVKE 521
           R+   W  LI GY + G +   L ++R+M+++   P    I S V+ ACA L A    ++
Sbjct: 386 RDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQ 445

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
            H  +    + S   +  SL++ Y++ GN+  +R +FD MSS+D + W +LI GY  HG 
Sbjct: 446 AHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGE 505

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
              AL L+ +M+  G +P+  TF+ ++ A S AG+ + GK++F SI   Y + P I HYS
Sbjct: 506 HGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYS 565

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            +IDL  R+G+L +A E I  MP+EP+   W +LL A RIH ++  A  A  ++  L+P 
Sbjct: 566 CIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPV 625

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
           D     L+  ++A+ G       VR        +   G  WIEV + ++ F  G  S   
Sbjct: 626 DPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPR 685

Query: 762 SDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAP 816
              +++ LQ +   +        S      + E+EKE +  +HSEKLA+AF LI ++   
Sbjct: 686 FQEIFAELQRLSPKIKEAGYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGT 745

Query: 817 HTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            T+RI   +R+C  CH   K++S +   EI + DS   H F++GQCSCGDYW
Sbjct: 746 -TLRIFNTLRICHDCHSAVKFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796



 Score =  219 bits (557), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 148/591 (25%), Positives = 280/591 (47%), Gaps = 85/591 (14%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
           Y + L+ C D  S+   R++H  ++     +VF+  +++  Y KCG +  AR  F+ +  
Sbjct: 30  YRDALRQCQDLESV---RQIHDRISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIAR 86

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           +N Y+W +M+ AY+++  +R  ++L+  M    L P+  ++  +L AC +    E GK +
Sbjct: 87  KNDYSWGSMLTAYAQNGHYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAI 143

Query: 180 HSLVIKL-GMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV-AWNSMISGYFQIG 237
           HS +    G+     + NS+L +Y KCG L  A+R FE M  +  V +WN+MI+ Y Q G
Sbjct: 144 HSRISGTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSG 203

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT------- 290
             +EA RL++ M   +++  V TF  ++ + + LG  D   ++   + S G         
Sbjct: 204 HFEEAIRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQN 260

Query: 291 ------------------------PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
                                    DV +W+ MI+ FA+     +A++ + +M   GV P
Sbjct: 261 ALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRP 320

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           N  T  S + AC  +  L  G  +H   +  G+   ++ G +L+++Y+    L+ A  +F
Sbjct: 321 NYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLF 380

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE-SDVPPNVITWNVLISG------- 438
           D I+++D   W  +I GY + G+     EL+ +M+  + VP   I ++ +IS        
Sbjct: 381 DQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAF 440

Query: 439 ----------------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
                                       Y + GN + A  +F +M       R+T +W +
Sbjct: 441 ADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMS-----SRDTLAWTT 495

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR- 529
           LIAGY + G+   ALG++++M+     P+ +T + VL AC++     + K++   +    
Sbjct: 496 LIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDY 555

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
           ++  ++   + +ID  +++G +  +  + + M    + +TW+SL+    +H
Sbjct: 556 AMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIH 606



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 113/474 (23%), Positives = 219/474 (46%), Gaps = 49/474 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFV 93
           +G   EAI + + +  +   VR  T+ ++L AC +   +   RK+HA ++   TE+D+ +
Sbjct: 202 SGHFEEAIRLYEDMDVE-PSVR--TFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSL 258

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           +  LL++YA+C CLDDA ++F+ +  R++ +WSAMI A++    + E +E +  M  +G+
Sbjct: 259 QNALLTMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGV 318

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+ + F  +L AC + GD  AG+ +H  ++  G         +++ +Y   G L  AR 
Sbjct: 319 RPNYYTFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARS 378

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------------ 249
            F+ ++ +D   W  +I GY + G       L+ +M                        
Sbjct: 379 LFDQIENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLG 438

Query: 250 -------CREEIKL-GVVTFNILIRS----YNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                     +I+  G+++  +L  S    Y++ G  + A ++  +M S     D   WT
Sbjct: 439 AFADARQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSS----RDTLAWT 494

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH-SLAVK 356
            +I+G+A++G    AL L+KEM   G  P+ +T    + AC+       G ++  S+   
Sbjct: 495 TLIAGYAKHGEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSD 554

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDM--IKDKDVYSWNSMIAGYCQAGYCGKAY 414
                ++   + +I++ S+   L  AE + +   ++  DV +W+S++          +A 
Sbjct: 555 YAMHPNIAHYSCIIDLLSRAGRLSDAEELINAMPVEPNDV-TWSSLLGASRIHKDVKRAT 613

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
               ++ + D P +  ++ +L + +   GN      +   M      KR  +SW
Sbjct: 614 HAAGQITKLD-PVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSW 666


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 234/714 (32%), Positives = 361/714 (50%), Gaps = 88/714 (12%)

Query: 199 LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD----KMCREEI 254
           + VY   G L  AR  F+ + + D   W  +IS   + G + EA + ++    K C E  
Sbjct: 18  IKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPD 77

Query: 255 KL--------------------------------GVVTFNILIRSYNQLGQCDVAMEMVK 282
           KL                                 V+  N LI  Y   G+C  +     
Sbjct: 78  KLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMY---GKCRCSEGARL 134

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
             E +    DV +WT M S +   G   +AL  F++M   G  PN VT++S + ACTDLK
Sbjct: 135 VFEGMPFR-DVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLK 193

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
            L  G E+H   V+ G   +V V ++L+NMY+ C  +  A+ VFD +  +D         
Sbjct: 194 DLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDT-------- 245

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                      ++WNVLI+ Y  N   ++ + +F RM  ++ V 
Sbjct: 246 ---------------------------VSWNVLITAYFLNKECEKGLSVFGRM-MSEGVG 277

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
            N ASWN++I G  Q G+   AL V  +MQ+S F PN +TI SVLPAC  L +    K+I
Sbjct: 278 LNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQI 337

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           HG + R      L    +L+  YAK G++  SR +F  M+ +D ++WN++I    +HG  
Sbjct: 338 HGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNG 397

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
             AL LF +M   G++PN  TF  ++   S + +VD G  +F S++  + + P  +H+S 
Sbjct: 398 EEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSC 457

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE--- 699
           M+D+  R+G+LEEA EFI+ MPIEP +  W ALL  CR++ N++L  +A  RLF++E   
Sbjct: 458 MVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLFEIESDN 517

Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSE 759
           PG+ +   L+  I        +A + RKL R+     + G  WI+V+N V+TFV G  S 
Sbjct: 518 PGNYV---LLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQVRNRVHTFVVGDKSN 574

Query: 760 SYSDLLYSWLQNVPEN--VTARSSHSGLC---IEEEEKEEISGIHSEKLALAFALIGSSQ 814
             SD +Y +L  + E   +     ++      +++EEKEE+   HSEKLA+AF ++ +  
Sbjct: 575 DQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVLCNHSEKLAVAFGVL-NLN 633

Query: 815 APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              +IR+ KN+R+C  CH   K+++ +   +I + DS   HHF++G CSC D+W
Sbjct: 634 GESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHFRDGLCSCQDFW 687



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 212/432 (49%), Gaps = 36/432 (8%)

Query: 61  INLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
           +++ +AC     +  A+++H   +      DV +   L+ +Y KC C + AR VFE M  
Sbjct: 82  LSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPF 141

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           R++ +W++M   Y      RE +  F  M  +G  P+      IL AC +  D ++G+ +
Sbjct: 142 RDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREV 201

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H  V++ GM     V ++++ +Y  C  +  A+  F+SM  +D V+WN +I+ YF   E 
Sbjct: 202 HGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKEC 261

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
           ++   +F +M  E + L   ++N +I    Q G+ + A+E++ RM++             
Sbjct: 262 EKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQN------------- 308

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
            SGF                      PN +TITS + ACT+L++L  G +IH    +  F
Sbjct: 309 -SGFK---------------------PNQITITSVLPACTNLESLRGGKQIHGYIFRHWF 346

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             D+    +L+ MY+KC +LE + RVF M+  +D  SWN+MI      G   +A  LF +
Sbjct: 347 FQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFRE 406

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M +S V PN +T+  ++SG   +   DE + +F  M ++  V+ +    + ++    + G
Sbjct: 407 MVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAG 466

Query: 480 QKNNALGVFRKM 491
           +   A    +KM
Sbjct: 467 RLEEAYEFIKKM 478



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 142/349 (40%), Gaps = 40/349 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVK 94
           G L EA+     +   G +    T  ++L AC D   +   R++H F +      +VFV 
Sbjct: 158 GLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVS 217

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRER---------------------------------- 120
           + L+++YA C  +  A+ VF+ M  R                                  
Sbjct: 218 SALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVG 277

Query: 121 -NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
            N  +W+A+IG   ++ R  + +E+   M   G  P+      +L AC N      GK +
Sbjct: 278 LNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQI 337

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H  + +           +++ +Y KCG L  +RR F  M ++D V+WN+MI      G  
Sbjct: 338 HGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNG 397

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTC 298
           +EA  LF +M    ++   VTF  ++   +     D  + +   M     + PD    +C
Sbjct: 398 EEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSC 457

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
           M+   ++ GR  +A +  K+M    + P      + +  C   K + +G
Sbjct: 458 MVDVLSRAGRLEEAYEFIKKMP---IEPTAGAWGALLGGCRVYKNVELG 503



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 9/221 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NGR  +A+ VL  +   G K  + T  ++L AC +  S+   +++H ++       D+  
Sbjct: 293 NGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTT 352

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +YAKCG L+ +R VF  M +R+  +W+ MI A S      E + LF  MV  G+
Sbjct: 353 TTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGV 412

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLM-HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            P+   F  +L  C +    + G L+  S+     +       + ++ V  + G+L  A 
Sbjct: 413 RPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAY 472

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDE-----AHRLFD 247
            F + M  E    AW +++ G  ++ +N E     A+RLF+
Sbjct: 473 EFIKKMPIEPTAGAWGALLGGC-RVYKNVELGRIAANRLFE 512


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 233/712 (32%), Positives = 374/712 (52%), Gaps = 77/712 (10%)

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
           ++I    +I    +A +L  +  R +  L   + +I+I  Y  L     A+ + K ++S 
Sbjct: 10  TLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKS- 67

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
              P V  W  +I  F      S+AL  F EM   G  P+     S + +CT +  L  G
Sbjct: 68  ---PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFG 124

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKC-------------------------EELEA- 381
             +H   V++G   D+  GN+L+NMY+K                          E+++A 
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAE 184

Query: 382 ----------AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
                       RVF+++  KDV S+N++IAGY Q+G    A  +  +M  +D+ P+  T
Sbjct: 185 TCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244

Query: 432 WNVL---------------ISGY-IQNGNEDEA------VDLFQRMGKNDKVKR------ 463
            + +               I GY I+ G + +       VD++ +  + +  +R      
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304

Query: 464 --NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
             +  SWNSL+AGY Q G+ N AL +FR+M ++   P  V   SV+PACA+L   +  K+
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           +HG VLR    S++ + ++L+D Y+K GNI  +R IFD M+  D ++W ++I G+ LHG 
Sbjct: 365 LHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGH 424

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
            H A+ LF++MK  G+KPN+  F++++ A S  G+VD     F S+T+ Y +   +EHY+
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA 484

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
           A+ DL GR+GKLEEA  FI  M +EP  S+W  LL++C +H N++LA    E++F ++  
Sbjct: 485 AVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSE 544

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
           ++    L+  +YA  G+ ++  K+R   R+   R      WIE+KN  + FV+G  S   
Sbjct: 545 NMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPS 604

Query: 762 SDLLYSWLQNVPENVTAR---SSHSGLC--IEEEEKEEISGIHSEKLALAFALIGSSQAP 816
            D +  +L+ V E +      +  SG+   ++EE K E+   HSE+LA+AF +I +++  
Sbjct: 605 MDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGII-NTEPG 663

Query: 817 HTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            TIR+ KNIR+C  CH   K++S +   EI + D+   HHF  G CSCGDYW
Sbjct: 664 TTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/477 (24%), Positives = 214/477 (44%), Gaps = 82/477 (17%)

Query: 76  ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           A++LHA       +     + ++S+Y     L +A  +F+ ++   +  W ++I  ++  
Sbjct: 24  AKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
             + + +  F  M   G  PD  +FP +L++C    D   G+ +H  +++LGM C     
Sbjct: 84  SLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 143

Query: 196 NSVLAVYVKC---GKLIWARRFFESMDEKDGVAWNSMISGY-----FQIGENDEAHRLFD 247
           N+++ +Y K    G  I     F+ M ++   + +  +        F I   D   R+F+
Sbjct: 144 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGI---DSVRRVFE 200

Query: 248 KMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
            M R++    VV++N +I  Y Q G  + A+ MV+ M +  + PD FT + ++  F    
Sbjct: 201 VMPRKD----VVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIF---- 252

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
             S+ +D+ K                             G EIH   ++ G   DV +G+
Sbjct: 253 --SEYVDVIK-----------------------------GKEIHGYVIRKGIDSDVYIGS 281

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           SL++MY+K   +E +ERVF  +  +D  SWNS++AGY Q G   +A  LF +M  + V P
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 341

Query: 428 NVITWNVLIS---------------GYIQNGN-------EDEAVDLFQRMGKNDKVKR-- 463
             + ++ +I                GY+  G            VD++ + G N K  R  
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCG-NIKAARKI 400

Query: 464 -------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
                  +  SW ++I G+   G  + A+ +F +M+     PN V  ++VL AC+++
Sbjct: 401 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV 457



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 127/557 (22%), Positives = 222/557 (39%), Gaps = 127/557 (22%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKC------------ 104
           N + ++L++C     +     +H F+  L  + D++    L+++YAK             
Sbjct: 106 NVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNV 165

Query: 105 -------------------GCL-----DDAREVFEDMRERNLYTWSAMIGAYSRDQRWRE 140
                               C+     D  R VFE M  +++ +++ +I  Y++   + +
Sbjct: 166 FDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYED 225

Query: 141 VVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
            + +   M    L PD F    +L       D   GK +H  VI+ G+     + +S++ 
Sbjct: 226 ALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVD 285

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y K  ++  + R F  +  +DG++WNS+++GY Q G  +EA RLF +M   ++K G V 
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345

Query: 261 F------------------------------NILIRS-----YNQLGQCDVAMEMVKRME 285
           F                              NI I S     Y++ G    A ++  RM 
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
            L    D  +WT +I G A +G   +A+ LF+EM   GV PN V   + ++AC+ +    
Sbjct: 406 VL----DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV---- 457

Query: 346 MGMEIHSLAVKMGFTDDVL-VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
                       G  D+     NS+  +Y   +ELE    V D++               
Sbjct: 458 ------------GLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG-------------- 491

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
            +AG   +AY    KM    V P    W+ L+S    + N + A  + +++   D    N
Sbjct: 492 -RAGKLEEAYNFISKMC---VEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVD--SEN 545

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             ++  +   Y   G+      +  +M+           L   PAC+++   NK    HG
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKG--------LRKKPACSWIEMKNKT---HG 594

Query: 525 CVLRRSLESSLPVMNSL 541
            V   S + S P M+ +
Sbjct: 595 FV---SGDRSHPSMDKI 608



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 156/318 (49%), Gaps = 5/318 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           +G   +A+ ++  + T   K    T  ++L    +   +   +++H + +    + DV++
Sbjct: 220 SGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYI 279

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAK   ++D+  VF  +  R+  +W++++  Y ++ R+ E + LF  MV   +
Sbjct: 280 GSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P    F  ++ AC +      GK +H  V++ G      + ++++ +Y KCG +  AR+
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M+  D V+W ++I G+   G   EA  LF++M R+ +K   V F  ++ + + +G 
Sbjct: 400 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 459

Query: 274 CDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            D A      M  + G+  ++  +  +     + G+  +A +   +M    V P G   +
Sbjct: 460 VDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMC---VEPTGSVWS 516

Query: 333 SAISACTDLKALAMGMEI 350
           + +S+C+  K L +  ++
Sbjct: 517 TLLSSCSVHKNLELAEKV 534


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 252/844 (29%), Positives = 415/844 (49%), Gaps = 94/844 (11%)

Query: 106 CLDD---AREVFEDMRERNLYTWSAMIGA------YSRDQRWREVVELFFLMVQDGLFPD 156
           CL D   AR   +++  R+     A +GA      Y+R     EV++ F +  + G+  D
Sbjct: 44  CLRDPPGARYPLDEIPRRD-----AAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVD 98

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR-RVRNSVLAVYVKCGKLIWARRFF 215
                 +L+AC +  D   G+ +H L +K G          S++ +Y+KCG +      F
Sbjct: 99  SATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVF 158

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           E M +K+ V W S+++G      + E   LF +M  E I     TF  ++ +    G  D
Sbjct: 159 EGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALD 218

Query: 276 VAMEMVKRMESLGI-------------------------------TPDVFTWTCMISGFA 304
           +   +  +    G                                T D+ +W  +++G  
Sbjct: 219 LGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQ 278

Query: 305 QNGRTSQALDLFKE-MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
            N    +AL LF E  + +G M    T  + I  C +LK LA+  ++HS  +K GF    
Sbjct: 279 LNECELEALQLFHESRATMGKMTQS-TYATVIKLCANLKQLALARQLHSCVLKHGFHLTG 337

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
            V  +L + YSKC EL  A  +F M    ++V SW ++I+G  Q G    A  LF +M+E
Sbjct: 338 NVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397

Query: 423 SDVPPNVITWNV-------------------------------LISGYIQNGNEDEAVDL 451
             V PN  T++                                L++ Y + G+ ++A+ +
Sbjct: 398 DRVMPNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSI 457

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           F+ + + D V     +W+++++ + Q G    A  +F KM      PN  TI SV+ ACA
Sbjct: 458 FKMIEQKDVV-----AWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACA 512

Query: 512 YLVAS-NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
              A  ++ ++ H   ++     ++ V ++L+  Y++ GNI  ++ +F+  + +D+++WN
Sbjct: 513 CPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWN 572

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC 630
           S+I GY  HG+   A++ F QM++ G++ +  TFL++I+  +  G+V  G++ F S+   
Sbjct: 573 SMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRD 632

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
           ++I P +EHY+ M+DLY R+GKL+E M  I DMP    + +W  LL ACR+H N++L   
Sbjct: 633 HKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKF 692

Query: 691 AIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVY 750
           + ++L  LEP D     L+  IYA  GK ++  +VRKL      +   G  WI++KN V+
Sbjct: 693 SADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVH 752

Query: 751 TFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLAL 805
           +F+    S   SD +Y  L+ +      +  +  +S     I E++KE +   HSE+LAL
Sbjct: 753 SFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLAL 812

Query: 806 AFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
           AF LI +   P T ++IVKN+R+C  CH   K VSM+   EI + D    HHF  G CSC
Sbjct: 813 AFGLIATP--PGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSC 870

Query: 865 GDYW 868
           GD+W
Sbjct: 871 GDFW 874



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 168/634 (26%), Positives = 286/634 (45%), Gaps = 90/634 (14%)

Query: 44  VLD--SIATQGAK-VRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLL 98
           VLD  S+A +G   V   T   +L+AC       L  +LH           +V   T L+
Sbjct: 83  VLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLV 142

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +Y KCG + +  EVFE M ++N+ TW++++   +  Q   EV+ LFF M  +G++P+ F
Sbjct: 143 DMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPF 202

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
            F  +L A  + G  + G+ +H+  +K G      V NS++ +Y KCG +  A+  F  M
Sbjct: 203 TFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWM 262

Query: 219 DEKDGVAWNSMISGYFQIGEND-EAHRLFD------------------KMCREEIKLGV- 258
           + +D V+WN++++G  Q+ E + EA +LF                   K+C    +L + 
Sbjct: 263 ETRDMVSWNTLMAG-LQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALA 321

Query: 259 -------------VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ 305
                        +T N++    +   +C    + +        + +V +WT +ISG  Q
Sbjct: 322 RQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQ 381

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
           NG    A+ LF  M    VMPN  T ++ + A   +    +  +IH+  +K  +     V
Sbjct: 382 NGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKTNYQHIPSV 437

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
           G +L+  YSK    E A  +F MI+ KDV +W++M++ + QAG C  A  LF KM    +
Sbjct: 438 GTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGI 497

Query: 426 PPNVITW------------------------------------NVLISGYIQNGNEDEAV 449
            PN  T                                     + L+S Y + GN D A 
Sbjct: 498 KPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQ 557

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
            +F+R     +  R+  SWNS+I+GY Q G    A+  FR+M++S    + VT L+V+  
Sbjct: 558 IVFER-----QTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMG 612

Query: 510 CAY--LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDI 566
           C +  LV   + +     V    +  ++     ++D Y+++G +  + ++   M      
Sbjct: 613 CTHNGLVVEGQ-QYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGA 671

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           + W +L+    +H   +  L  F   K   L+P+
Sbjct: 672 MVWRTLLGACRVHK--NVELGKFSADKLLSLEPH 703


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 251/875 (28%), Positives = 428/875 (48%), Gaps = 71/875 (8%)

Query: 52   GAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDA 110
            G  + R T   LL+ C+ S  + ++  +H + + +  E+D+FV   L+++Y K G +  A
Sbjct: 712  GFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQA 771

Query: 111  REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
            R +F+ M ER+   W+ M+ AY  +    E +  F    + G FPD   F  +    G  
Sbjct: 772  RLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPD---FSNLHCVIGGV 828

Query: 171  -GDFEAGKLMHSLVIK---LGMSCVRRVRN-----SVLAVYVKCGKLIWA----RRFFES 217
              D    +  H+  +K   + M    +  N       L  ++  G+++ A    +    S
Sbjct: 829  NSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRS 888

Query: 218  MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
                D V    ++S      + D   ++   + +      V   N L+  Y++ G    A
Sbjct: 889  TIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAA 948

Query: 278  MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
             +       L    D+ +W  MIS +AQN    +A+  F+++   G+ P+  T+ S + A
Sbjct: 949  EKTFINSPEL----DLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRA 1004

Query: 338  CT---DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
            C+   + +   +G ++H  A+K G  +D  V  +LI++YSK  +++ AE +     D D+
Sbjct: 1005 CSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDL 1064

Query: 395  YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG---------------- 438
             SWN+++ GY ++    KA E F  M E  +P + IT    I                  
Sbjct: 1065 ASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAY 1124

Query: 439  -------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
                               YI+ G+   A++LF  + + D+V     +W ++I+GY + G
Sbjct: 1125 AIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEV-----AWTTMISGYIENG 1179

Query: 480  QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
             +++AL V+  M+ S   P+  T  +++ A + L A  + K+IH  V++        V  
Sbjct: 1180 DEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGT 1239

Query: 540  SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
            SL+D Y K G++  +  +F  M  + ++ WN+++ G   HG    AL+LF  M+S G++P
Sbjct: 1240 SLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQP 1299

Query: 600  NRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEF 659
            ++ TF+ ++ A S +G+     K F ++ + Y I P IEHYS ++D  GR+G+++EA   
Sbjct: 1300 DKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENV 1359

Query: 660  IEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKP 719
            I  MP +  +S++ ALL ACR  G+ + A    ++L  L+P D     L+  IYA   + 
Sbjct: 1360 IASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQW 1419

Query: 720  EDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTAR 779
            +D    R + +    +   G  WI+VKN V+ FV    S   + L+Y  ++++ + +   
Sbjct: 1420 DDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREE 1479

Query: 780  SSH------SGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHE 833
             S+      + L +EEEEKE     HSEKLA+AF LI S+    TIR++KN+R+C  CH 
Sbjct: 1480 GSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLI-STPPSATIRVIKNLRVCGDCHS 1538

Query: 834  TAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              K +S +   EI L D+   HHF+NG CSCGDYW
Sbjct: 1539 AIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 167/673 (24%), Positives = 311/673 (46%), Gaps = 53/673 (7%)

Query: 65   QACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLY 123
            ++ I    + L ++ HA +    ++ D ++   L+++Y+KCG L  AR+VF+   +R+L 
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 124  TWSAMIGAYSR--DQRWREVVE---LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
            TW++++ AY++  D  +  V+E   LF L+ + G          +L+ C   G  +  + 
Sbjct: 679  TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738

Query: 179  MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
            +H   +K+G      V  +++ +Y K G +  AR  F+ M E+D V WN M+  Y +   
Sbjct: 739  VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 239  NDEAHRLFDKMCREEIKLGVVTFNILIR------SYNQLGQCDVAMEMVKRMESLGITPD 292
             DEA R F    R          + +I       S N+    +       +M       +
Sbjct: 799  QDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSN 858

Query: 293  VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
            +F W   ++ F   G+   A+D FK +    +  + VT+   +SA      L +G +IH+
Sbjct: 859  IFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHA 918

Query: 353  LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
            L +K  F   V V NSL+NMYSK   + AAE+ F    + D+ SWN+MI+ Y Q     +
Sbjct: 919  LVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEME 978

Query: 413  AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE------------------------- 447
            A   F  +    + P+  T   ++      G+E E                         
Sbjct: 979  AICTFRDLLRDGLKPDQFTLASVLRA-CSTGDEGEYFTLGSQVHVYAIKCGIINDSFVST 1037

Query: 448  -AVDLFQRMGKND--------KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
              +DL+ + GK D        K   + ASWN+++ GY +  +   AL  F  M       
Sbjct: 1038 ALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPI 1097

Query: 499  NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
            + +T+ + + A   L+   + K+I    ++    + L V + ++D Y K G++  +  +F
Sbjct: 1098 DEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELF 1157

Query: 559  DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
              +S  D + W ++I GY+ +G    AL ++  M+  G++P+  TF ++I A S    ++
Sbjct: 1158 GEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALE 1217

Query: 619  LGKKVFCSITECYQIIPMIEHY--SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
             GK++  ++    ++   ++H+  ++++D+Y + G +++A      M +      W A+L
Sbjct: 1218 QGKQIHANVV---KLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVR-KVVFWNAML 1273

Query: 677  TACRIHGNIDLAV 689
                 HG++D A+
Sbjct: 1274 LGLAQHGHVDEAL 1286



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 203/474 (42%), Gaps = 54/474 (11%)

Query: 40   EAITVLDSIATQGAKVRRNTYINLLQACIDSNS---IHLARKLHAFLNLVTEI-DVFVKT 95
            EAI     +   G K  + T  ++L+AC   +      L  ++H +      I D FV T
Sbjct: 978  EAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVST 1037

Query: 96   KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
             L+ +Y+K G +D+A  +     + +L +W+A++  Y +  + R+ +E F LM + G+  
Sbjct: 1038 ALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPI 1097

Query: 156  DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
            D+      ++A G   + + GK + +  IKLG +    V + VL +Y+KCG +  A   F
Sbjct: 1098 DEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELF 1157

Query: 216  ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
              +   D VAW +MISGY + G+ D A  ++  M    ++    TF  LI++      C 
Sbjct: 1158 GEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKA----SSCL 1213

Query: 276  VAMEMVKRMESLGITPD-----------------------------------VFTWTCMI 300
             A+E  K++ +  +  D                                   V  W  M+
Sbjct: 1214 TALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAML 1273

Query: 301  SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM-GF 359
             G AQ+G   +AL+LF+ M   G+ P+ VT    +SAC+     +   +      K  G 
Sbjct: 1274 LGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGI 1333

Query: 360  TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ----AGYCGKAYE 415
            T ++   + L++   +   ++ AE V   +  K   S    + G C+    A    +  +
Sbjct: 1334 TPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVAD 1393

Query: 416  LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
              + +  SD    V+  N+    Y  +   D+  D  + M K   VK++   SW
Sbjct: 1394 KLLALDPSDSSAYVLLSNI----YAASRQWDDVTDA-RNMMKLKNVKKDPGFSW 1442


>gi|302773754|ref|XP_002970294.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
 gi|300161810|gb|EFJ28424.1| hypothetical protein SELMODRAFT_93439 [Selaginella moellendorffii]
          Length = 1096

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 278/917 (30%), Positives = 439/917 (47%), Gaps = 114/917 (12%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFLNLV-TEID- 90
            NG   +A+ V   +   G+ VR N  T+++++ AC  SN + L R       ++ T  D 
Sbjct: 205  NGHCKDAMQVFQLMDLDGS-VRPNDATFVSVVDAC--SNLLDLPRGKSTHERIIRTGFDS 261

Query: 91   -VFVKTKLLSVYAKCGCLDDAREVFEDMRERNL---YTWSAMIGAYSRDQRWREVVELFF 146
             +FV   L+++Y KCG +D AR VFE MR R++   Y+W+ +I A++ +    E   LF+
Sbjct: 262  YLFVGNSLVNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFY 321

Query: 147  LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
             M  +G+ P+   F  +L+AC      E    + + V  LG+     +  + ++ + K G
Sbjct: 322  KMDLEGVLPNKVTFVTVLRACTTLAQCEK---IFARVKHLGLELDTTLGTAFVSTFAKLG 378

Query: 207  KLIWARRFFESM-DEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CR------------- 251
             L  AR  FE++   ++ V+W  MI  Y Q G    A  L+ +M C              
Sbjct: 379  DLAAARDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCEPNAVTFMAVMDSC 438

Query: 252  ---------EEIKLGVVTFNI---------LIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
                     E+I   +V             L+  Y + G  D A  + + ++       V
Sbjct: 439  LRPEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLKE----RSV 494

Query: 294  FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
              W  M+S FA NG   ++L L++ M   G  P+ +T  + + AC  +       E    
Sbjct: 495  VAWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDACQSVS------EARRY 548

Query: 354  AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD-VYSWNSMIAGYCQAGYCGK 412
            A       D+   N+ ++ Y++C  L+ A+  FD I+ K+   +WN+MI+G  Q G   +
Sbjct: 549  AATFELELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQ 608

Query: 413  AYELFIKMQESDVPPNVITW----------------------------------NVLISG 438
            A E F KM+   V  N +T+                                  N +I+ 
Sbjct: 609  ALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHARILLENIHEANLSNAVINM 668

Query: 439  YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
            Y + G+ DEA+D F +M + D +     SWN++IA Y Q G    AL  F++M    + P
Sbjct: 669  YGKCGSLDEAMDEFVKMPERDVI-----SWNTMIATYAQHGSGRQALEFFKQMDLEGWTP 723

Query: 499  NCVTILSVLPACAYLVASNKVKEIHGCVLRRS--LESSLPVMNSLIDTYAKSGNIVYSRT 556
            +  T L  + AC  + +    K IH  V   +  LE    V  +L+  YA+ G++  +++
Sbjct: 724  DRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKS 783

Query: 557  IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
            +F    S++++TW++LI     HG  + ALDLF +M+  G KP+  TF +++ A S  G+
Sbjct: 784  VFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACSRRGV 843

Query: 617  V-DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
            V D G+++F ++   Y +    EHY  M+++ GR+GKLEEA   I+ MP +   +IW AL
Sbjct: 844  VKDGGRRIFDALGRVYPVSASAEHYGCMVEVLGRAGKLEEAEGLIQGMPRKASGAIWMAL 903

Query: 676  LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL-QIYAICGKPEDALKVRK-LERENT 733
            L AC   G+++  + A  R   L+PG       +L ++Y   G+ EDA +VRK +E  N 
Sbjct: 904  LAACNRRGDLERGIRAANRAQQLDPGSFAASMAMLAELYGAAGRWEDAARVRKAVESRNA 963

Query: 734  RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSS----HSGLCIEE 789
            RR   G+ WIEV N V+ F      E    L    L  +   +   SS      G+C +E
Sbjct: 964  RREPGGRSWIEVNNRVHEF-----GEDDDRLQGPRLDKIRGELQRLSSLAVEEGGICKDE 1018

Query: 790  EEKEEISG-IHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFL 848
              +  I G  HSEK+A+ F ++ S+ A   IRIVKN+R C  CH  AK+VS     EI +
Sbjct: 1019 NARAHILGCCHSEKVAIGFGIV-STPAGQLIRIVKNLRACHDCHAFAKFVSRRIQREISV 1077

Query: 849  ADSKCLHHF-KNGQCSC 864
             D   LH F  NG CSC
Sbjct: 1078 RDPYGLHCFHTNGSCSC 1094



 Score =  290 bits (741), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 199/719 (27%), Positives = 335/719 (46%), Gaps = 76/719 (10%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
           G L E +     +   G K     +  +L AC  + +++  + +H  + L       V  
Sbjct: 106 GHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCVVLAGMETQVVGN 165

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LF 154
            ++++Y KCG + +A+ VFE + ERNL +W+A+I A +++   ++ +++F LM  DG + 
Sbjct: 166 AIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCKDAMQVFQLMDLDGSVR 225

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+D  F  ++ AC N  D   GK  H  +I+ G      V NS++ +Y KCG +  AR  
Sbjct: 226 PNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSLVNMYGKCGSVDHARLV 285

Query: 215 FESMDEKDGV---AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           FE M  +D +   +W  +I+ +   G   EA  LF KM  E +    VTF  ++R+   L
Sbjct: 286 FEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVLPNKVTFVTVLRACTTL 345

Query: 272 GQCDVAMEMVKRM-----------------------------ESLGITPDVFTWTCMISG 302
            QC+     VK +                             E+LG + +V +WT MI  
Sbjct: 346 AQCEKIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFENLGSSRNVVSWTVMIWA 405

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           +AQ G    A DL+K M      PN VT  + + +C   + L    +IH+  V  GF  D
Sbjct: 406 YAQQGFIRAAFDLYKRMD---CEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFESD 462

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V++   L+ MY KC  +++A  +F+ +K++ V +WNSM++ +   G   ++ +L+ +M  
Sbjct: 463 VVLQVCLVTMYGKCGSVDSAWSIFENLKERSVVAWNSMLSAFASNGCYERSLKLYERMLL 522

Query: 423 SDVPPNVITW-----------------------------NVLISGYIQNGNEDEAVDLFQ 453
               P+ IT+                             N  +S Y + G+  EA   F 
Sbjct: 523 EGTKPDKITYLAVLDACQSVSEARRYAATFELELDIAARNAAVSAYARCGSLKEAKAAFD 582

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
            +    + K N  +WN++I+G  Q G+   AL  F KM+      N VT L+ L AC+ L
Sbjct: 583 AI----QWKNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSL 638

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
               + +++H  +L  ++  +  + N++I+ Y K G++  +   F  M  +D+I+WN++I
Sbjct: 639 KDLTRGRQLHARILLENIHEA-NLSNAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMI 697

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK---KVFCSITEC 630
             Y  HG    AL+ F QM   G  P+R T+L  I A      + LGK    +  +   C
Sbjct: 698 ATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIVATAAPC 757

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            +  P +   +A++ +Y R G L +A           +   W  L+ AC  HG  + A+
Sbjct: 758 LEQDPGVA--TALVTMYARCGSLHDAKSVFW-RSHSRNLVTWSNLIAACAQHGRENEAL 813



 Score =  271 bits (694), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 195/699 (27%), Positives = 334/699 (47%), Gaps = 96/699 (13%)

Query: 60  YINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           Y +LLQ C +  S    + +H   L+    ++ +++  L+ +YAKCGCL DA EVFE + 
Sbjct: 29  YASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEVFELLP 88

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
             N+++W+A+I AY+++   REV+  F  M  DG  PD F+F  +L AC + G    GK 
Sbjct: 89  CPNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKA 148

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H  V+  GM   + V N+++ +Y KCG++  A+  FE + E++ V+WN++I+   Q G 
Sbjct: 149 IHDCVVLAGME-TQVVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGH 207

Query: 239 NDEAHRLFDKM-------------------CREEIKL--GVVTFNILIRS---------- 267
             +A ++F  M                   C   + L  G  T   +IR+          
Sbjct: 208 CKDAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGN 267

Query: 268 -----YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
                Y + G  D A  + ++M  L     V++WT +I+ FA NG   +A  LF +M   
Sbjct: 268 SLVNMYGKCGSVDHARLVFEKMR-LRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLE 326

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           GV+PN VT  + + ACT    LA   +I +    +G   D  +G + ++ ++K  +L AA
Sbjct: 327 GVLPNKVTFVTVLRACT---TLAQCEKIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAA 383

Query: 383 ERVFDMI-KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV------- 434
             VF+ +   ++V SW  MI  Y Q G+   A++L+ +M   D  PN +T+         
Sbjct: 384 RDVFENLGSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRM---DCEPNAVTFMAVMDSCLR 440

Query: 435 ----------------------------LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                       L++ Y + G+ D A  +F+ +      +R+  
Sbjct: 441 PEDLPRAEQIHAHMVASGFESDVVLQVCLVTMYGKCGSVDSAWSIFENLK-----ERSVV 495

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           +WNS+++ +   G    +L ++ +M      P+ +T L+VL AC        V E     
Sbjct: 496 AWNSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDAC------QSVSEARRYA 549

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLHGFWHAA 585
               LE  +   N+ +  YA+ G++  ++  FD +  K + +TWN++I G   HG    A
Sbjct: 550 ATFELELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQA 609

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           L+ F +M+  G++ N  T+L+ + A S    +  G+++   I    + I      +A+I+
Sbjct: 610 LECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHARIL--LENIHEANLSNAVIN 667

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
           +YG+ G L+EAM+    MP E D   W  ++     HG+
Sbjct: 668 MYGKCGSLDEAMDEFVKMP-ERDVISWNTMIATYAQHGS 705



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 209/469 (44%), Gaps = 88/469 (18%)

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
            S +  C + K+ A G  +H   +  G   +  + N LI MY+KC  L+ A  VF+++  
Sbjct: 30  ASLLQKCAEQKSAAAGKLVHQHILSSGCGVNRYLQNHLIFMYAKCGCLQDAVEVFELLPC 89

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG--NEDEA- 448
            +V+SW ++I  Y + G+  +    F KMQ     P+   ++ +++     G  NE +A 
Sbjct: 90  PNVFSWTALITAYAKEGHLREVLGFFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAI 149

Query: 449 ------------------VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKN 482
                             V+L+ + G+  + K        RN  SWN+LIA   Q G   
Sbjct: 150 HDCVVLAGMETQVVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGHCK 209

Query: 483 NALGVFRKMQ-SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
           +A+ VF+ M       PN  T +SV+ AC+ L+   + K  H  ++R   +S L V NSL
Sbjct: 210 DAMQVFQLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGNSL 269

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIIT---WNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           ++ Y K G++ ++R +F+ M  +D+++   W  +I  +  +G    A  LF +M   G+ 
Sbjct: 270 VNMYGKCGSVDHARLVFEKMRLRDVLSVYSWTVIIAAFAHNGHLLEAFVLFYKMDLEGVL 329

Query: 599 PNRGTFLSIILA------------------------------HSLAGMVDLG--KKVFCS 626
           PN+ TF++++ A                               + A + DL   + VF +
Sbjct: 330 PNKVTFVTVLRACTTLAQCEKIFARVKHLGLELDTTLGTAFVSTFAKLGDLAAARDVFEN 389

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC------- 679
           +     ++     ++ MI  Y + G +  A +  + M  EP++  + A++ +C       
Sbjct: 390 LGSSRNVVS----WTVMIWAYAQQGFIRAAFDLYKRMDCEPNAVTFMAVMDSCLRPEDLP 445

Query: 680 ---RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
              +IH ++      +   F+    DV++Q  ++ +Y  CG  + A  +
Sbjct: 446 RAEQIHAHM------VASGFE---SDVVLQVCLVTMYGKCGSVDSAWSI 485



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 167/348 (47%), Gaps = 40/348 (11%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           ++ L     NG    ++ + + +  +G K  + TY+ +L AC    S+  AR+  A   L
Sbjct: 498 NSMLSAFASNGCYERSLKLYERMLLEGTKPDKITYLAVLDAC---QSVSEARRYAATFEL 554

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR-ERNLYTWSAMIGAYSRDQRWREVVEL 144
             E+D+  +   +S YA+CG L +A+  F+ ++ + N  TW+AMI   ++    ++ +E 
Sbjct: 555 --ELDIAARNAAVSAYARCGSLKEAKAAFDAIQWKNNAVTWNAMISGLAQHGESKQALEC 612

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           F+ M  +G+  +   +   L+AC +  D   G+ +H+ ++   +     + N+V+ +Y K
Sbjct: 613 FWKMELEGVRANSVTYLASLEACSSLKDLTRGRQLHARILLENIHEA-NLSNAVINMYGK 671

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE------------ 252
           CG L  A   F  M E+D ++WN+MI+ Y Q G   +A   F +M  E            
Sbjct: 672 CGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSGRQALEFFKQMDLEGWTPDRATYLGA 731

Query: 253 --------EIKLGVVTFNILIRSYNQL----GQCDVAMEMVKRMESLGITPDVF------ 294
                    + LG    +I+  +   L    G     + M  R  SL     VF      
Sbjct: 732 IDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSHSR 791

Query: 295 ---TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
              TW+ +I+  AQ+GR ++ALDLF+EM   G  P+ +T ++ ++AC+
Sbjct: 792 NLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPDALTFSTLVAACS 839



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/384 (23%), Positives = 176/384 (45%), Gaps = 15/384 (3%)

Query: 19  KSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARK 78
           K+N    +  +  L  +G   +A+     +  +G +    TY+  L+AC     +   R+
Sbjct: 587 KNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRANSVTYLASLEACSSLKDLTRGRQ 646

Query: 79  LHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRW 138
           LHA + L    +  +   ++++Y KCG LD+A + F  M ER++ +W+ MI  Y++    
Sbjct: 647 LHARILLENIHEANLSNAVINMYGKCGSLDEAMDEFVKMPERDVISWNTMIATYAQHGSG 706

Query: 139 REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR---VR 195
           R+ +E F  M  +G  PD   +   + ACG+      GK +HS+V      C+ +   V 
Sbjct: 707 RQALEFFKQMDLEGWTPDRATYLGAIDACGSVPSLALGKTIHSIVAT-AAPCLEQDPGVA 765

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
            +++ +Y +CG L  A+  F     ++ V W+++I+   Q G  +EA  LF +M  +  K
Sbjct: 766 TALVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTK 825

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLG----ITPDVFTWTCMISGFAQNGRTS 310
              +TF+ L+ + ++ G   V  +  +R+ ++LG    ++     + CM+    + G+  
Sbjct: 826 PDALTFSTLVAACSRRG---VVKDGGRRIFDALGRVYPVSASAEHYGCMVEVLGRAGKLE 882

Query: 311 QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI 370
           +A  L + M       +G    + ++AC     L  G+   + A ++           L 
Sbjct: 883 EAEGLIQGMP---RKASGAIWMALLAACNRRGDLERGIRAANRAQQLDPGSFAASMAMLA 939

Query: 371 NMYSKCEELEAAERVFDMIKDKDV 394
            +Y      E A RV   ++ ++ 
Sbjct: 940 ELYGAAGRWEDAARVRKAVESRNA 963


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 215/617 (34%), Positives = 343/617 (55%), Gaps = 46/617 (7%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEI 350
           D   W  +++G+A+NG    A+++   M    G  P+ +T+ S + AC + +ALA   E 
Sbjct: 124 DRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREA 183

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H+ A++ G  + V V  ++++ Y KC ++ AA  VFD +  K+  SWN+MI GY Q G  
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDS 243

Query: 411 GKAYELFIKMQESDVP-----------------------------------PNVITWNVL 435
            +A  LF +M E  V                                     NV   N L
Sbjct: 244 REALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNAL 303

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           I+ Y +    D A  +F  + +     R   SWN++I G  Q G   +A+ +F +MQ   
Sbjct: 304 ITMYSKCKRVDLASHVFDELDR-----RTQVSWNAMILGCAQNGCSEDAVRLFTRMQLEN 358

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
             P+  T++SV+PA A +    + + IHG  +R  L+  + V+ +LID YAK G +  +R
Sbjct: 359 VKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIAR 418

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            +F+    + +ITWN++I GY  HGF  AA++LF++MKS G+ PN  TFLS++ A S AG
Sbjct: 419 ILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAG 478

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
           +VD G++ F S+ E Y + P +EHY  M+DL GR+GKL+EA  FI+ MP++P  S++ A+
Sbjct: 479 LVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAM 538

Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
           L AC++H N++LA  + +++F+L P + +   L+  IYA     +D  +VR    +N  +
Sbjct: 539 LGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQ 598

Query: 736 NSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA----RSSHSGLCIEEEE 791
            + G   I++KN ++TF +G  +   +  +YS L  + E + A      + S   +E++ 
Sbjct: 599 KTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSIHDVEDDV 658

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           K ++   HSEKLA+AF LI ++    TI+I KN+R+C  CH   K +S++   EI + D 
Sbjct: 659 KAQLLNTHSEKLAIAFGLIRTAPGT-TIQIKKNLRVCNDCHNATKLISLVTGREIIMRDI 717

Query: 852 KCLHHFKNGQCSCGDYW 868
           +  HHFK+G+CSCGDYW
Sbjct: 718 QRFHHFKDGKCSCGDYW 734



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 236/506 (46%), Gaps = 36/506 (7%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTK 96
           L  A+    ++++ GA     T+ +LL+ C     +   R +HA L     + +    T 
Sbjct: 40  LPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATA 99

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD-GLFP 155
           L ++YAKC    DAR VF+ M  R+   W+A++  Y+R+   R  +E+   M ++ G  P
Sbjct: 100 LANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERP 159

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D      +L AC N     A +  H+  I+ G+  +  V  ++L  Y KCG +  AR  F
Sbjct: 160 DSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVF 219

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           + M  K+ V+WN+MI GY Q G++ EA  LF++M  E + +  V+    +++  +LG  D
Sbjct: 220 DWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLD 279

Query: 276 VAMEMVKRMESLGITPDV-------------------------------FTWTCMISGFA 304
             M + + +  +G+  +V                                +W  MI G A
Sbjct: 280 EGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCA 339

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           QNG +  A+ LF  M    V P+  T+ S I A  D+        IH  ++++    DV 
Sbjct: 340 QNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVY 399

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
           V  +LI+MY+KC  +  A  +F+  +++ V +WN+MI GY   G+   A ELF +M+   
Sbjct: 400 VLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIG 459

Query: 425 VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
           + PN  T+  ++S     G  DE  + F  M ++  ++     + +++    + G+ + A
Sbjct: 460 IVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPAC 510
               +KM      P      ++L AC
Sbjct: 520 WAFIQKMPMD---PGLSVYGAMLGAC 542



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 212/480 (44%), Gaps = 83/480 (17%)

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           F  M   G  P    F  +L+ C   GD   G+ +H+ +   G+        ++  +Y K
Sbjct: 47  FVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAK 106

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE----------- 253
           C +   ARR F+ M  +D VAWN++++GY + G    A  +  +M  EE           
Sbjct: 107 CRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166

Query: 254 ---------------------IKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
                                I+ G    V     ++ +Y + G    A  +   M    
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMP--- 223

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
            T +  +W  MI G+AQNG + +AL LF  M   GV    V++ +A+ AC +L  L  GM
Sbjct: 224 -TKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
            +H L V++G   +V V N+LI MYSKC+ ++ A  VFD +  +   SWN+MI G  Q G
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLIS---------------GYIQNGNEDEAV---- 449
               A  LF +MQ  +V P+  T   +I                GY    + D+ V    
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLT 402

Query: 450 ---DLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
              D++ + G+        N   +R+  +WN++I GY   G    A+ +F +M+S    P
Sbjct: 403 ALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVP 462

Query: 499 NCVTILSVLPACAY--LVASNK-----VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
           N  T LSVL AC++  LV   +     +KE +G      LE  +    +++D   ++G +
Sbjct: 463 NETTFLSVLSACSHAGLVDEGREYFTSMKEDYG------LEPGMEHYGTMVDLLGRAGKL 516



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 146/313 (46%), Gaps = 7/313 (2%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVT 87
           +D    NG   EA+ + + +  +G  V   + +  LQAC +   +    ++H  L  +  
Sbjct: 234 IDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGL 293

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + +V V   L+++Y+KC  +D A  VF+++  R   +W+AMI   +++    + V LF  
Sbjct: 294 DSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTR 353

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M  + + PD F    ++ A  +  D    + +H   I+L +     V  +++ +Y KCG+
Sbjct: 354 MQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGR 413

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           +  AR  F S  E+  + WN+MI GY   G    A  LF++M    I     TF  ++ +
Sbjct: 414 VNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSA 473

Query: 268 YNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            +  G  D   E    M E  G+ P +  +  M+    + G+  +A    ++M     M 
Sbjct: 474 CSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP----MD 529

Query: 327 NGVTITSA-ISAC 338
            G+++  A + AC
Sbjct: 530 PGLSVYGAMLGAC 542



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 128/250 (51%), Gaps = 8/250 (3%)

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ-SSCFYPNCVTILS 505
           +A  +F RM   D+V     +WN+L+AGY + G    A+ +  +MQ      P+ +T++S
Sbjct: 112 DARRVFDRMPVRDRV-----AWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           VLPACA   A    +E H   +R  LE  + V  +++D Y K G+I  +R +FD M +K+
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN 226

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
            ++WN++I GY  +G    AL LF++M   G+     + L+ + A    G +D G +V  
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHE 286

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
            +     +   +   +A+I +Y +  +++ A    +++      S W A++  C  +G  
Sbjct: 287 LLVRI-GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS-WNAMILGCAQNGCS 344

Query: 686 DLAVLAIERL 695
           + AV    R+
Sbjct: 345 EDAVRLFTRM 354



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 37/271 (13%)

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID 543
           AL  F  M S+   P   T  S+L  CA        + +H  +  R ++S      +L +
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK-SFGLKPNRG 602
            YAK      +R +FD M  +D + WN+L+ GY  +G    A+++  +M+   G +P+  
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 603 TFLSIIL-------------AHSLA------GMVDLGKKVFCSITECYQI---------I 634
           T +S++              AH+ A       +V++   +  +  +C  I         +
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222

Query: 635 PMIEHYS--AMIDLYGRSGKLEEAMEFIEDMPIE----PDSSIWEALLTACRIHGNIDLA 688
           P     S  AMID Y ++G   EA+     M  E     D S+  A L AC   G +D  
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAA-LQACGELGCLDEG 281

Query: 689 VLAIERLFDLE-PGDVLIQRLILQIYAICGK 718
           +   E L  +    +V +   ++ +Y+ C +
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKR 312


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 215/617 (34%), Positives = 343/617 (55%), Gaps = 46/617 (7%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEI 350
           D   W  +++G+A+NG    A+++   M    G  P+ +T+ S + AC + +ALA   E 
Sbjct: 124 DRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACREA 183

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H+ A++ G  + V V  ++++ Y KC ++ AA  VFD +  K+  SWN+MI GY Q G  
Sbjct: 184 HAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDS 243

Query: 411 GKAYELFIKMQESDVP-----------------------------------PNVITWNVL 435
            +A  LF +M E  V                                     NV   N L
Sbjct: 244 REALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNAL 303

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           I+ Y +    D A  +F  + +     R   SWN++I G  Q G   +A+ +F +MQ   
Sbjct: 304 ITMYSKCKRVDLASHVFDELDR-----RTQVSWNAMILGCAQNGCSEDAVRLFTRMQLEN 358

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
             P+  T++SV+PA A +    + + IHG  +R  L+  + V+ +LID YAK G +  +R
Sbjct: 359 VKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIAR 418

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            +F+    + +ITWN++I GY  HGF  AA++LF++MKS G+ PN  TFLS++ A S AG
Sbjct: 419 ILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAG 478

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
           +VD G++ F S+ E Y + P +EHY  M+DL GR+GKL+EA  FI+ MP++P  S++ A+
Sbjct: 479 LVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAM 538

Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
           L AC++H N++LA  + +++F+L P + +   L+  IYA     +D  +VR    +N  +
Sbjct: 539 LGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQ 598

Query: 736 NSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA----RSSHSGLCIEEEE 791
            + G   I++KN ++TF +G  +   +  +YS L  + E + A      + S   +E++ 
Sbjct: 599 KTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLIEEIKAVGYVPDTDSIHDVEDDV 658

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           K ++   HSEKLA+AF LI ++    TI+I KN+R+C  CH   K +S++   EI + D 
Sbjct: 659 KAQLLNTHSEKLAIAFGLIRTAPGT-TIQIKKNLRVCNDCHNATKLISLVTGREIIMRDI 717

Query: 852 KCLHHFKNGQCSCGDYW 868
           +  HHFK+G+CSCGDYW
Sbjct: 718 QRFHHFKDGKCSCGDYW 734



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 236/506 (46%), Gaps = 36/506 (7%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTK 96
           L  A+    ++++ GA     T+ +LL+ C     +   R +HA L     + +    T 
Sbjct: 40  LPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATA 99

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD-GLFP 155
           L ++YAKC    DAR VF+ M  R+   W+A++  Y+R+   R  +E+   M ++ G  P
Sbjct: 100 LANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERP 159

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D      +L AC N     A +  H+  I+ G+  +  V  ++L  Y KCG +  AR  F
Sbjct: 160 DSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVF 219

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           + M  K+ V+WN+MI GY Q G++ EA  LF++M  E + +  V+    +++  +LG  D
Sbjct: 220 DWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLD 279

Query: 276 VAMEMVKRMESLGITPDV-------------------------------FTWTCMISGFA 304
             M + + +  +G+  +V                                +W  MI G A
Sbjct: 280 EGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCA 339

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           QNG +  A+ LF  M    V P+  T+ S I A  D+        IH  ++++    DV 
Sbjct: 340 QNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVY 399

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
           V  +LI+MY+KC  +  A  +F+  +++ V +WN+MI GY   G+   A ELF +M+   
Sbjct: 400 VLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIG 459

Query: 425 VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
           + PN  T+  ++S     G  DE  + F  M ++  ++     + +++    + G+ + A
Sbjct: 460 IVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPAC 510
               +KM      P      ++L AC
Sbjct: 520 WAFIQKMPMD---PGLSVYGAMLGAC 542



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 212/480 (44%), Gaps = 83/480 (17%)

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           F  M   G  P    F  +L+ C   GD   G+ +H+ +   G+        ++  +Y K
Sbjct: 47  FVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAK 106

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE----------- 253
           C +   ARR F+ M  +D VAWN++++GY + G    A  +  +M  EE           
Sbjct: 107 CRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166

Query: 254 ---------------------IKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
                                I+ G    V     ++ +Y + G    A  +   M    
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMP--- 223

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
            T +  +W  MI G+AQNG + +AL LF  M   GV    V++ +A+ AC +L  L  GM
Sbjct: 224 -TKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
            +H L V++G   +V V N+LI MYSKC+ ++ A  VFD +  +   SWN+MI G  Q G
Sbjct: 283 RVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNG 342

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLIS---------------GYIQNGNEDEAV---- 449
               A  LF +MQ  +V P+  T   +I                GY    + D+ V    
Sbjct: 343 CSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLT 402

Query: 450 ---DLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
              D++ + G+        N   +R+  +WN++I GY   G    A+ +F +M+S    P
Sbjct: 403 ALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVP 462

Query: 499 NCVTILSVLPACAY--LVASNK-----VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
           N  T LSVL AC++  LV   +     +KE +G      LE  +    +++D   ++G +
Sbjct: 463 NETTFLSVLSACSHAGLVDEGREYFTSMKEDYG------LEPGMEHYGTMVDLLGRAGKL 516



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 146/313 (46%), Gaps = 7/313 (2%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVT 87
           +D    NG   EA+ + + +  +G  V   + +  LQAC +   +    ++H  L  +  
Sbjct: 234 IDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGL 293

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + +V V   L+++Y+KC  +D A  VF+++  R   +W+AMI   +++    + V LF  
Sbjct: 294 DSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTR 353

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M  + + PD F    ++ A  +  D    + +H   I+L +     V  +++ +Y KCG+
Sbjct: 354 MQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGR 413

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           +  AR  F S  E+  + WN+MI GY   G    A  LF++M    I     TF  ++ +
Sbjct: 414 VNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSA 473

Query: 268 YNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            +  G  D   E    M E  G+ P +  +  M+    + G+  +A    ++M     M 
Sbjct: 474 CSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP----MD 529

Query: 327 NGVTITSA-ISAC 338
            G+++  A + AC
Sbjct: 530 PGLSVYGAMLGAC 542



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 128/250 (51%), Gaps = 8/250 (3%)

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ-SSCFYPNCVTILS 505
           +A  +F RM   D+V     +WN+L+AGY + G    A+ +  +MQ      P+ +T++S
Sbjct: 112 DARRVFDRMPVRDRV-----AWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVS 166

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           VLPACA   A    +E H   +R  LE  + V  +++D Y K G+I  +R +FD M +K+
Sbjct: 167 VLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKN 226

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
            ++WN++I GY  +G    AL LF++M   G+     + L+ + A    G +D G +V  
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHE 286

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
            +     +   +   +A+I +Y +  +++ A    +++      S W A++  C  +G  
Sbjct: 287 LLVRI-GLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS-WNAMILGCAQNGCS 344

Query: 686 DLAVLAIERL 695
           + AV    R+
Sbjct: 345 EDAVRLFTRM 354



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 37/271 (13%)

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID 543
           AL  F  M S+   P   T  S+L  CA        + +H  +  R ++S      +L +
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK-SFGLKPNRG 602
            YAK      +R +FD M  +D + WN+L+ GY  +G    A+++  +M+   G +P+  
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162

Query: 603 TFLSIIL-------------AHSLA------GMVDLGKKVFCSITECYQI---------I 634
           T +S++              AH+ A       +V++   +  +  +C  I         +
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222

Query: 635 PMIEHYS--AMIDLYGRSGKLEEAMEFIEDMPIE----PDSSIWEALLTACRIHGNIDLA 688
           P     S  AMID Y ++G   EA+     M  E     D S+  A L AC   G +D  
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAA-LQACGELGCLDEG 281

Query: 689 VLAIERLFDLE-PGDVLIQRLILQIYAICGK 718
           +   E L  +    +V +   ++ +Y+ C +
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKR 312


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 252/844 (29%), Positives = 415/844 (49%), Gaps = 94/844 (11%)

Query: 106 CLDD---AREVFEDMRERNLYTWSAMIGA------YSRDQRWREVVELFFLMVQDGLFPD 156
           CL D   AR   +++  R+     A +GA      Y+R     EV++ F +  + G+  D
Sbjct: 44  CLRDPPGARYPLDEIPRRD-----AAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVD 98

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR-RVRNSVLAVYVKCGKLIWARRFF 215
                 +L+AC +  D   G+ +H L +K G          S++ +Y+KCG +      F
Sbjct: 99  SATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVF 158

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           E M +K+ V W S+++G      + E   LF +M  E I     TF  ++ +    G  D
Sbjct: 159 EGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALD 218

Query: 276 VAMEMVKRMESLGI-------------------------------TPDVFTWTCMISGFA 304
           +   +  +    G                                T D+ +W  +++G  
Sbjct: 219 LGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQ 278

Query: 305 QNGRTSQALDLFKE-MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
            N    +AL LF E  + +G M    T  + I  C +LK LA+  ++HS  +K GF    
Sbjct: 279 LNECELEALQLFHESRATMGKMTQS-TYATVIKLCANLKQLALARQLHSCVLKHGFHLTG 337

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
            V  +L + YSKC EL  A  +F M    ++V SW ++I+G  Q G    A  LF +M+E
Sbjct: 338 NVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMRE 397

Query: 423 SDVPPNVITWNV-------------------------------LISGYIQNGNEDEAVDL 451
             V PN  T++                                L++ Y + G+ ++A+ +
Sbjct: 398 DRVMPNEFTYSAMLKASLSILPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSI 457

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           F+ + + D V     +W+++++ + Q G    A  +F KM      PN  TI SV+ ACA
Sbjct: 458 FKMIEQKDVV-----AWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACA 512

Query: 512 YLVAS-NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
              A  ++ ++ H   ++     ++ V ++L+  Y++ GNI  ++ +F+  + +D+++WN
Sbjct: 513 CPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWN 572

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC 630
           S+I GY  HG+   A++ F QM++ G++ +  TFL++I+  +  G+V  G++ F S+   
Sbjct: 573 SMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRD 632

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
           ++I P +EHY+ M+DLY R+GKL+E M  I DMP    + +W  LL ACR+H N++L   
Sbjct: 633 HKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKF 692

Query: 691 AIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVY 750
           + ++L  LEP D     L+  IYA  GK ++  +VRKL      +   G  WI++KN V+
Sbjct: 693 SADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVH 752

Query: 751 TFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLAL 805
           +F+    S   SD +Y  L+ +      +  +  +S     I E++KE +   HSE+LAL
Sbjct: 753 SFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSFVLHDIAEDQKEAMLVAHSERLAL 812

Query: 806 AFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
           AF LI +   P T ++IVKN+R+C  CH   K VSM+   EI + D    HHF  G CSC
Sbjct: 813 AFGLIATP--PGTPLQIVKNLRVCGDCHMVMKMVSMIEDREIIMRDCSRFHHFNGGACSC 870

Query: 865 GDYW 868
           GD+W
Sbjct: 871 GDFW 874



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 169/642 (26%), Positives = 288/642 (44%), Gaps = 90/642 (14%)

Query: 36  GRLNEAITVLD--SIATQGAK-VRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--D 90
            R    + VLD  S+A +G   V   T   +L+AC       L  +LH           +
Sbjct: 75  ARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGE 134

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           V   T L+ +Y KCG + +  EVFE M ++N+ TW++++   +  Q   EV+ LFF M  
Sbjct: 135 VSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRA 194

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           +G++P+ F F  +L A  + G  + G+ +H+  +K G      V NS++ +Y KCG +  
Sbjct: 195 EGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSSVFVCNSLMNMYAKCGLVED 254

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGEND-EAHRLFD------------------KMCR 251
           A+  F  M+ +D V+WN++++G  Q+ E + EA +LF                   K+C 
Sbjct: 255 AKSVFNWMETRDMVSWNTLMAG-LQLNECELEALQLFHESRATMGKMTQSTYATVIKLCA 313

Query: 252 EEIKLGV--------------VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
              +L +              +T N++    +   +C    + +        + +V +WT
Sbjct: 314 NLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWT 373

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            +ISG  QNG    A+ LF  M    VMPN  T ++ + A   +    +  +IH+  +K 
Sbjct: 374 AIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKT 429

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            +     VG +L+  YSK    E A  +F MI+ KDV +W++M++ + QAG C  A  LF
Sbjct: 430 NYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLF 489

Query: 418 IKMQESDVPPNVITW------------------------------------NVLISGYIQ 441
            KM    + PN  T                                     + L+S Y +
Sbjct: 490 NKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSR 549

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            GN D A  +F+R     +  R+  SWNS+I+GY Q G    A+  FR+M++S    + V
Sbjct: 550 KGNIDSAQIVFER-----QTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGV 604

Query: 502 TILSVLPACAY--LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
           T L+V+  C +  LV   + +     V    +  ++     ++D Y+++G +  + ++  
Sbjct: 605 TFLAVIMGCTHNGLVVEGQ-QYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIR 663

Query: 560 GMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
            M      + W +L+    +H   +  L  F   K   L+P+
Sbjct: 664 DMPFPAGAMVWRTLLGACRVHK--NVELGKFSADKLLSLEPH 703


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 259/925 (28%), Positives = 460/925 (49%), Gaps = 100/925 (10%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRNTYINLLQAC--IDSNSIHLARKLHAFLNLVT-EIDV 91
            NG  +EA  +   I + G         + L+AC  +  N + L  ++H  ++      D+
Sbjct: 118  NGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDM 177

Query: 92   FVKTKLLSVYAKCGC-LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
             +   L+S+Y+ C   +DDAR VFE+++ +   +W+++I  Y R        +LF  M +
Sbjct: 178  VLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQR 237

Query: 151  DGL----FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRR---VRNSVLAVY 202
            +       P+++ F  ++     C   + G  L+  ++ ++  S   +   V +++++ +
Sbjct: 238  EATELNCRPNEYTFCSLVTVA--CSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGF 295

Query: 203  VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
             + G +  A+  FE MD+++ V  N ++ G  +  + +EA ++F +M ++ +++   ++ 
Sbjct: 296  ARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM-KDLVEINASSYA 354

Query: 263  ILIRSYNQL---------GQ-----------CDV----------------AMEMVKRMES 286
            +L+ ++ +          GQ            DV                A++  + +  
Sbjct: 355  VLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQ 414

Query: 287  LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
            L  + D  +W  +ISG   N R  +A+  F  M   G++P+  ++ S +S+C  L  + +
Sbjct: 415  LMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIML 474

Query: 347  GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
            G +IH   +K G   DV V N+L+ +Y++ + +E  ++VF ++ + D  SWNS I     
Sbjct: 475  GQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALAT 534

Query: 407  A-GYCGKAYELFIKMQESDVPPNVITW--------------------------------- 432
            +     +A + F++M ++   PN +T+                                 
Sbjct: 535  SEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNA 594

Query: 433  --NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
              N L++ Y +    ++   +F RM +    +R+  SWN++I+GY   G  + A+G+   
Sbjct: 595  IENTLLAFYGKCEQMEDCEIIFSRMSE----RRDEVSWNAMISGYIHNGILHKAMGLVWL 650

Query: 491  MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGN 550
            M       +  T+ +VL ACA +    +  E+H C +R  LE+ + V ++L+D YAK G 
Sbjct: 651  MMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGK 710

Query: 551  IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA 610
            I Y+   F+ M  ++I +WNS+I GY  HG    AL LF QMK  G  P+  TF+ ++ A
Sbjct: 711  IDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSA 770

Query: 611  HSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSS 670
             S  G+VD G + F S+ E Y++ P IEH+S M+DL GR+G +++  EFI+ MP+ P++ 
Sbjct: 771  CSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNAL 830

Query: 671  IWEALLTA-CRIHG-NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKL 728
            IW  +L A CR +  N +L   A + L +LEP + +   L+  ++A  GK ED  + R  
Sbjct: 831  IWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLA 890

Query: 729  ERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHS 783
             R    +   G  W+ +K+ V+ FV G  +    + +Y  L+ +   +        + ++
Sbjct: 891  MRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDKLKEIMNKMRDLGYVPETKYA 950

Query: 784  GLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHH 843
               +E E KEE+   HSEKLA+AF L   S+ P  IRI+KN+R+C  CH   KY+S + +
Sbjct: 951  LYDLELENKEELLSYHSEKLAIAFVLTRQSELP--IRIIKNLRVCGDCHTAFKYISNIVN 1008

Query: 844  CEIFLADSKCLHHFKNGQCSCGDYW 868
             +I L DS   HHF  G CSC DYW
Sbjct: 1009 RQIILRDSNRFHHFDGGICSCQDYW 1033



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 179/699 (25%), Positives = 321/699 (45%), Gaps = 91/699 (13%)

Query: 69  DSNSIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSA 127
           DS ++  A +LH          DVF    L++++ + G L  A+++F++M ++NL +WS 
Sbjct: 51  DSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSC 110

Query: 128 MIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD--FEAGKLMHSLVIK 185
           ++  Y+++    E   LF  ++  GL P+ +     L+AC   G    + G  +H L+ K
Sbjct: 111 LVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISK 170

Query: 186 LGMSCVRRVRNSVLAVYVKCGKLI-WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHR 244
              +    + N ++++Y  C   I  ARR FE +  K   +WNS+IS Y + G+   A +
Sbjct: 171 SPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFK 230

Query: 245 LFDKMCREEIKLGV----VTFNILIRSYNQLGQCDVAM--EMVKRMESLGITPDVFTWTC 298
           LF  M RE  +L       TF  L+     L  C + +  +M+ R+E      D++  + 
Sbjct: 231 LFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSA 290

Query: 299 MISGFAQNGRTSQALDLFKEMS----------FVGV---------------MPNGVTITS 333
           ++SGFA+ G    A  +F++M            VG+               M + V I +
Sbjct: 291 LVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDLVEINA 350

Query: 334 A-----ISACTDLKALA----MGMEIHSLAVKMGFTDD-VLVGNSLINMYSKCEELEAAE 383
           +     +SA T+   L      G E+H+  ++    D  +L+GN+L+N+Y+KC  ++ A 
Sbjct: 351 SSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNAR 410

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP---------------- 427
            +F ++  KD  SWNS+I+G        +A   F  M+ + + P                
Sbjct: 411 SIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLG 470

Query: 428 -------------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                              +V   N L++ Y +    +E   +F  M + D+V     SW
Sbjct: 471 WIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQV-----SW 525

Query: 469 NSLIAGY-QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           NS I            A+  F +M  + + PN VT +++L A + L      ++IH  +L
Sbjct: 526 NSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALIL 585

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS-KDIITWNSLICGYVLHGFWHAAL 586
           + S+     + N+L+  Y K   +     IF  MS  +D ++WN++I GY+ +G  H A+
Sbjct: 586 KHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAM 645

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF-CSITECYQIIPMIEHYSAMID 645
            L   M   G + +  T  +++ A +    ++ G +V  C+I  C +   ++   SA++D
Sbjct: 646 GLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVG--SALVD 703

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
           +Y + GK++ A  F E MP+    S W ++++    HG+
Sbjct: 704 MYAKCGKIDYASRFFELMPVRNIYS-WNSMISGYARHGH 741


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 213/590 (36%), Positives = 331/590 (56%), Gaps = 26/590 (4%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           +V  +  MI  +  NG    AL +FK M+  G  P+  T    + AC+    L +G++IH
Sbjct: 101 NVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIH 160

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
              VK+G   ++ +GN L++MY KC+ L+AA RV D +  +D+ SWNSM+AGY Q G   
Sbjct: 161 GAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFN 220

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV---DLFQRMGKNDKVKRNTASW 468
            A +L  +M++  + P+  T   L+   + N + D  +   D+F ++ +     ++  SW
Sbjct: 221 DALKLCREMEDLKLKPDAGTMGSLLPA-VTNTSCDNVLYVKDMFVKLKE-----KSLISW 274

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           N +IA Y      N A+ ++ +MQ     P+ V+I SVLPAC  L A+   + IH  V R
Sbjct: 275 NVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVER 334

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
           + L  +L + N+LID YAK G +  +R +FD M  +D+++W S+I  Y + G    A+ L
Sbjct: 335 KKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVAL 394

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F +M+  G  P+   F+S++ A S AG+VD G+  F  + E Y I P IEHY+ M+DL G
Sbjct: 395 FKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLMAE-YGITPGIEHYNCMVDLLG 453

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+GK++EA      MP+EP+  +W +LL+ACR++ ++++A+LA + LF L P       L
Sbjct: 454 RAGKIDEAYHLTRQMPMEPNERVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVL 513

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  IYA  G+ +D   VR +      +   G   +E+ + VYTF+ G  S + S  +Y  
Sbjct: 514 LSNIYAKAGRWQDVETVRSIMNSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKA 573

Query: 769 ----------LQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
                     L  +PE  +A        +EEE+KE    +HSEKLA+ FA++ +++   T
Sbjct: 574 LGVLVGRMKELGYMPETDSALHD-----VEEEDKECHLAVHSEKLAIVFAIL-NTKPGST 627

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IRI KNIR+C  CH   K +S +   EI + D+   HHF++G CSCGDYW
Sbjct: 628 IRITKNIRVCGDCHVATKLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 238/471 (50%), Gaps = 7/471 (1%)

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
           KL+  YA CG     R +F+++ ++N+  ++ MI +Y  +  +++ + +F  M   G +P
Sbjct: 76  KLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYP 135

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D++ +P +L+AC   G+   G  +H  V+KLG+     + N ++++Y KC  L  ARR  
Sbjct: 136 DNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVL 195

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           + M  +D V+WNSM++GY Q G  ++A +L  +M   ++K    T   L+ +      CD
Sbjct: 196 DEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNT-SCD 254

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
             +  VK M        + +W  MI+ +  N   ++A+DL+ +M   GV P+ V+I+S +
Sbjct: 255 NVL-YVKDMFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVL 313

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
            AC DL A  +G  IH    +     ++L+ N+LI+MY+KC  L+ A  VFD +  +DV 
Sbjct: 314 PACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVV 373

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           SW SMI+ Y  +G    A  LF KM++S   P+ I +  +++     G  DE    F  M
Sbjct: 374 SWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLM 433

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
            +   +      +N ++    + G+ + A  + R+M      PN     S+L AC    +
Sbjct: 434 AEYG-ITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMP---MEPNERVWGSLLSACRVYSS 489

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
            N        + + + E S   +  L + YAK+G      T+   M+SK I
Sbjct: 490 MNIALLAADHLFQLAPEQSGYYV-LLSNIYAKAGRWQDVETVRSIMNSKGI 539



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 180/377 (47%), Gaps = 16/377 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFV 93
           NG   +A+ V  ++A QG      TY  +L+AC  S ++ +  ++H A + L  ++++++
Sbjct: 115 NGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYI 174

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+S+Y KC  LD AR V ++M  R++ +W++M+  Y+++ R+ + ++L   M    L
Sbjct: 175 GNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKL 234

Query: 154 FPDDFLFPKILQACGN--CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            PD      +L A  N  C +    K    + +KL    +    N ++AVYV       A
Sbjct: 235 KPDAGTMGSLLPAVTNTSCDNVLYVK---DMFVKLKEKSLIS-WNVMIAVYVNNAMPNEA 290

Query: 212 RRFFESMD----EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
              +  M     E D V+ +S++     +       R+ + + R++++  ++  N LI  
Sbjct: 291 VDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDM 350

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           Y + G    A  +  +M    +  DV +WT MIS +  +G+   A+ LFK+M   G  P+
Sbjct: 351 YAKCGCLKEARAVFDQM----MFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPD 406

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVF 386
            +   S ++AC+    +  G    +L  + G T  +   N ++++  +  ++ EA     
Sbjct: 407 WIAFVSVLAACSHAGLVDEGRYCFNLMAEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTR 466

Query: 387 DMIKDKDVYSWNSMIAG 403
            M  + +   W S+++ 
Sbjct: 467 QMPMEPNERVWGSLLSA 483



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 161/364 (44%), Gaps = 67/364 (18%)

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
           +G  L+  Y+ C E      +FD I DK+V  +N MI  Y   G    A  +F  M    
Sbjct: 73  LGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQG 132

Query: 425 VPPNVITWNVL-----ISG---------------------YIQNG-----NEDEAVDLFQ 453
             P+  T+  +     +SG                     YI NG      + + +D  +
Sbjct: 133 FYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAAR 192

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
           R+  ++   R+  SWNS++AGY Q G+ N+AL + R+M+     P+  T+ S+LPA    
Sbjct: 193 RV-LDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPA---- 247

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
                                  V N+  D      N++Y + +F  +  K +I+WN +I
Sbjct: 248 -----------------------VTNTSCD------NVLYVKDMFVKLKEKSLISWNVMI 278

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
             YV +   + A+DL+ QM+  G++P+  +  S++ A        LG+++     E  ++
Sbjct: 279 AVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIH-EYVERKKL 337

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
            P +   +A+ID+Y + G L+EA    + M    D   W ++++A  + G    AV   +
Sbjct: 338 RPNLLLENALIDMYAKCGCLKEARAVFDQMMFR-DVVSWTSMISAYGMSGQGKDAVALFK 396

Query: 694 RLFD 697
           ++ D
Sbjct: 397 KMRD 400



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 100/201 (49%), Gaps = 9/201 (4%)

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVL-RRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           C  IL V P    L      K++H  +L  ++L  +  +   L+  YA  G   Y+R IF
Sbjct: 41  CNKILDVNPDAKTL------KKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIF 94

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           D ++ K+++ +N +I  YV +G +  AL +F  M + G  P+  T+  ++ A S++G + 
Sbjct: 95  DEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLW 154

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           +G ++  ++ +    + +    + ++ +YG+   L+ A   +++MP   D   W +++  
Sbjct: 155 VGLQIHGAVVKLGLDMNLYIG-NGLVSMYGKCKWLDAARRVLDEMPGR-DMVSWNSMVAG 212

Query: 679 CRIHGNIDLAVLAIERLFDLE 699
              +G  + A+     + DL+
Sbjct: 213 YAQNGRFNDALKLCREMEDLK 233


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 234/776 (30%), Positives = 370/776 (47%), Gaps = 118/776 (15%)

Query: 134 RDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR 193
           +  R +E + +   M+  G      +F  +LQ C      E G+ +H+ ++K G      
Sbjct: 73  KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSG------ 126

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
                          I   R+ E          N+++S Y + G   +A R+FD      
Sbjct: 127 ---------------IQPNRYLE----------NTLLSMYAKCGSLTDARRVFDG----- 156

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
                      IR  N                       + +WT MI  F    +  +A 
Sbjct: 157 -----------IRDRN-----------------------IVSWTAMIEAFVAGNQNLEAY 182

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
             ++ M   G  P+ VT  S ++A T+ + L +G ++H    K G   +  VG SL+ MY
Sbjct: 183 KCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMY 242

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW- 432
           +KC ++  A+ +FD + +K+V +W  +IAGY Q G    A EL  KMQ+++V PN IT+ 
Sbjct: 243 AKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYT 302

Query: 433 ----------------------------------NVLISGYIQNGNEDEAVDLFQRMGKN 458
                                             N LI+ Y + G   EA  LF      
Sbjct: 303 SILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLF-----G 357

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
           D   R+  +W +++ GY QLG  + A+ +FR+MQ     P+ +T  S L +C+      +
Sbjct: 358 DLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQE 417

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
            K IH  ++       + + ++L+  YAK G++  +R +F+ MS ++++ W ++I G   
Sbjct: 418 GKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQ 477

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           HG    AL+ F+QMK  G+KP++ TF S++ A +  G+V+ G+K F S+   Y I PM+E
Sbjct: 478 HGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVE 537

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
           HYS  +DL GR+G LEEA   I  MP +P  S+W ALL+ACRIH +++    A E +  L
Sbjct: 538 HYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKL 597

Query: 699 EPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS 758
           +P D      +  IYA  G+ EDA KVR++  +       GQ WIEV   V+ F     S
Sbjct: 598 DPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVFHVEDKS 657

Query: 759 ESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSS 813
              +  +Y+ L  + E +  +            ++EE+K +    HSE+LA+ + L+ + 
Sbjct: 658 HPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAITYGLMKTP 717

Query: 814 QAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             P T IRIVKN+R+C  CH  +K++S +   EI   D+   HHF +G CSCGD+W
Sbjct: 718 --PGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGVCSCGDFW 771



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 176/614 (28%), Positives = 291/614 (47%), Gaps = 71/614 (11%)

Query: 6   LTTFQQLHSLLTKKSNPRFRDT-----HLDFLCGNGRLNEAITVLDSIATQGAKVRRNTY 60
           LTT    H  L   +  R  DT      +  LC  GRL EA+ +L+++  QG +V  + +
Sbjct: 40  LTTPTVSHDQLPGNAGFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVF 99

Query: 61  INLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
             LLQ C    S+   R++HA  L    + + +++  LLS+YAKCG L DAR VF+ +R+
Sbjct: 100 RGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRD 159

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           RN+ +W+AMI A+    +  E  + +  M   G  PD   F  +L A  N    + G+ +
Sbjct: 160 RNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKV 219

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H  + K G+    RV  S++ +Y KCG +  A+  F+ + EK+ V W  +I+GY Q G+ 
Sbjct: 220 HMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQV 279

Query: 240 DEAHRLFDKMCREEIKLGVVTF-----------------------------------NIL 264
           D A  L +KM + E+    +T+                                   N L
Sbjct: 280 DVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNAL 339

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITP--DVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
           I  Y + G    A ++       G  P  DV TWT M++G+AQ G   +A+DLF+ M   
Sbjct: 340 ITMYCKCGGLKEARKL------FGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQ 393

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           G+ P+ +T TSA+++C+    L  G  IH   V  G++ DV + ++L++MY+KC  ++ A
Sbjct: 394 GIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDA 453

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
             VF+ + +++V +W +MI G  Q G C +A E F +M++  + P+ +T+  ++S     
Sbjct: 454 RLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHV 513

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G  +E    F+ M  +  +K     ++  +    + G    A  V   M    F P    
Sbjct: 514 GLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMP---FQPGPSV 570

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLR--RSLESSLPV-------MNSLIDTYAKSGNIVY 553
             ++L AC           IH  V R  R+ E+ L +         +L + YA +G    
Sbjct: 571 WGALLSAC----------RIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRYED 620

Query: 554 SRTIFDGMSSKDII 567
           +  +   M  +D++
Sbjct: 621 AEKVRQVMEKRDVV 634


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 239/795 (30%), Positives = 391/795 (49%), Gaps = 105/795 (13%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRE--RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           T L++ YA  G L  A   F+ + +  R+    +A+I AY+R       V +F  ++  G
Sbjct: 92  TSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151

Query: 153 -LFPDDFLFPKILQACGNCGDFEAGKL--MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            L PDD+ F  +L A G+  +        +   V+K G   V  V N+++A+Y+KC  L 
Sbjct: 152 SLRPDDYSFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALE 211

Query: 210 W---ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
               AR+  + M +KD + W +M+ GY + G+   A  +F+++   ++K  VV       
Sbjct: 212 ATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEV---DVKFDVV------- 261

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
                                        W  MISG+  +G   +A +LF+ M    V  
Sbjct: 262 -----------------------------WNAMISGYVHSGMVVEAFELFRRMVLERVPL 292

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKM--GFTDD--VLVGNSLINMYSKCEELEAA 382
           +  T TS +SAC +    A G  +H    ++   F  +  + V N+L+ +YSKC  +  A
Sbjct: 293 DEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVA 352

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
            R+FD +K K                                   +V++WN ++SGY+++
Sbjct: 353 RRIFDNMKSK-----------------------------------DVVSWNTILSGYVES 377

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
              D+AV++F+ M       +N  SW  +++GY   G   +AL +F +M++    P   T
Sbjct: 378 SCLDKAVEVFEEMPY-----KNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYT 432

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
               + AC  L +    K++HG +++   E S    N+LI  YA+ G +  +  +F  M 
Sbjct: 433 YAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMP 492

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
           + D ++WN++I     HG    AL+LFD+M + G+ P+R +FL+++ A + +G+VD G +
Sbjct: 493 NIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQ 552

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F S+   + IIP  +HY+ +IDL GR+G++ EA + I+ MP EP  SIWEA+L+ CR  
Sbjct: 553 YFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTS 612

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
           G+++L   A ++LF + P       L+   Y+  G+  DA +VRKL R+   +   G  W
Sbjct: 613 GDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSW 672

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKE 793
           IE  N V+ FV G      +  +Y +L    E V AR    G           +E  +KE
Sbjct: 673 IEAGNKVHVFVVGDTKHPEAHKVYKFL----EMVGARMRKLGYVPDTKVVLHDMEPHQKE 728

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
            I   HSE+LA+ F L+       T+ ++KN+R+C  CH    ++S     EI + D + 
Sbjct: 729 HILFAHSERLAVGFGLLKLPPGA-TVTVLKNLRICDDCHAVMMFMSKAVGREIVVRDVRR 787

Query: 854 LHHFKNGQCSCGDYW 868
            HHFK+G+CSCG+YW
Sbjct: 788 FHHFKDGECSCGNYW 802



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 213/457 (46%), Gaps = 49/457 (10%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           N  + L   C    +   ARK+   L+ + + D    T ++  Y + G +  AR VFE++
Sbjct: 198 NALVALYMKCEALEATRDARKV---LDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEV 254

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             +    W+AMI  Y       E  ELF  MV + +  D+F F  +L AC N G F  GK
Sbjct: 255 DVKFDVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGK 314

Query: 178 LMHSLVIKLGMSCVRR----VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
            +H  + +L  + V      V N+++ +Y KCG +  ARR F++M  KD V+WN+++SGY
Sbjct: 315 SVHGQITRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGY 374

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
            +    D+A  +F++M  +      +++ +++  Y   G  + A+++  RM +  + P  
Sbjct: 375 VESSCLDKAVEVFEEMPYKN----ELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCD 430

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
           +T+                                     AISAC +L +L  G ++H  
Sbjct: 431 YTY-----------------------------------AGAISACGELGSLKHGKQLHGH 455

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            V++GF      GN+LI MY++C  ++ A  +F ++ + D  SWN+MI+   Q G+  +A
Sbjct: 456 LVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREA 515

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            ELF +M    + P+ I++  +++    +G  DE    F+ M ++  +      +  LI 
Sbjct: 516 LELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLID 575

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
              + G+   A  + + M    F P      ++L  C
Sbjct: 576 LLGRAGRIGEARDLIKTMP---FEPTPSIWEAILSGC 609



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 156/340 (45%), Gaps = 15/340 (4%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           N  + L   C    +I +AR++  F N+ ++ DV     +LS Y +  CLD A EVFE+M
Sbjct: 337 NALVTLYSKC---GNIAVARRI--FDNMKSK-DVVSWNTILSGYVESSCLDKAVEVFEEM 390

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             +N  +W  M+  Y       + ++LF  M  + + P D+ +   + ACG  G  + GK
Sbjct: 391 PYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGK 450

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H  +++LG        N+++ +Y +CG +  A   F  M   D V+WN+MIS   Q G
Sbjct: 451 QLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHG 510

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTW 296
              EA  LFD+M  E I    ++F  ++ + N  G  D   +  + M+   GI P    +
Sbjct: 511 HGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHY 570

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           T +I    + GR  +A DL K M F    P      + +S C     + +G        K
Sbjct: 571 TRLIDLLGRAGRIGEARDLIKTMPF---EPTPSIWEAILSGCRTSGDMELGAHAADQLFK 627

Query: 357 MGFTDDVLVGNSLI--NMYSKCEELEAAERVFDMIKDKDV 394
           M    D   G  ++  N YS       A RV  +++D+ V
Sbjct: 628 MTPQHD---GTYILLSNTYSAAGRWVDAARVRKLMRDRGV 664



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 4/258 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
            G   +A+ + + +  +  K    TY   + AC +  S+   ++LH  L  L  E     
Sbjct: 408 GGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEGSNSA 467

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+++YA+CG + +A  +F  M   +  +W+AMI A  +    RE +ELF  MV +G+
Sbjct: 468 GNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGI 527

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           +PD   F  +L AC + G  + G +   S+    G+         ++ +  + G++  AR
Sbjct: 528 YPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEAR 587

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
              ++M  E     W +++SG    G+ +      D++ +   +    T+ +L  +Y+  
Sbjct: 588 DLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHD-GTYILLSNTYSAA 646

Query: 272 GQCDVAMEMVKRMESLGI 289
           G+   A  + K M   G+
Sbjct: 647 GRWVDAARVRKLMRDRGV 664


>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
 gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
 gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 705

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 230/682 (33%), Positives = 364/682 (53%), Gaps = 37/682 (5%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           NS++A Y        AR+ F+ M +++ ++WN ++SGY + GE DEA ++FD M      
Sbjct: 52  NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER--- 108

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             VV++  L++ Y   G+ DVA  +  +M       +  +WT M+ GF Q+GR   A  L
Sbjct: 109 -NVVSWTALVKGYVHNGKVDVAESLFWKMPE----KNKVSWTVMLIGFLQDGRIDDACKL 163

Query: 316 FKEMSFVGVMPNGVTI--TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
           ++      ++P+   I  TS I        +    EI     +      V+   +++  Y
Sbjct: 164 YE------MIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERS----VITWTTMVTGY 213

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
            +   ++ A ++FD++ +K   SW SM+ GY Q G    A ELF  M    V P VI  N
Sbjct: 214 GQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP---VKP-VIACN 269

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
            +ISG  Q G   +A  +F  M +     RN ASW ++I  +++ G +  AL +F  MQ 
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKE-----RNDASWQTVIKIHERNGFELEALDLFILMQK 324

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
               P   T++S+L  CA L + +  K++H  ++R   +  + V + L+  Y K G +V 
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG-LKPNRGTFLSIILAHS 612
           S+ IFD   SKDII WNS+I GY  HG    AL +F +M   G  KPN  TF++ + A S
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
            AGMV+ G K++ S+   + + P+  HY+ M+D+ GR+G+  EAME I+ M +EPD+++W
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVW 504

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
            +LL ACR H  +D+A    ++L ++EP +     L+  +YA  G+  D  ++RKL +  
Sbjct: 505 GSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTR 564

Query: 733 TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------ 786
             R S G  W EV+N V+ F  GG +          + +  + +   + ++  C      
Sbjct: 565 LVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHD 624

Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
           ++EEEK      HSE+LA+A+AL+  S+    IR++KN+R+C  CH   K +S +   EI
Sbjct: 625 VDEEEKVNSLKYHSERLAVAYALLKLSEGI-PIRVMKNLRVCSDCHTAIKIISKVKEREI 683

Query: 847 FLADSKCLHHFKNGQCSCGDYW 868
            L D+   HHF+NG+CSC DYW
Sbjct: 684 ILRDANRFHHFRNGECSCKDYW 705



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 140/534 (26%), Positives = 241/534 (45%), Gaps = 61/534 (11%)

Query: 9   FQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACI 68
            ++ +S          R THL  +   G+++EA  + DS  ++      +++ +++    
Sbjct: 7   LRRTYSTTIPPPTANVRITHLSRI---GKIHEARKLFDSCDSKSI----SSWNSMVAGYF 59

Query: 69  DSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAM 128
            +     ARKL    + + + ++     L+S Y K G +D+AR+VF+ M ERN+ +W+A+
Sbjct: 60  ANLMPRDARKL---FDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTAL 116

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM 188
           +  Y  + +      LF+ M +        +    LQ  G   D  A KL   +  K  +
Sbjct: 117 VKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQD-GRIDD--ACKLYEMIPDKDNI 173

Query: 189 SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
           +     R S++    K G++  AR  F+ M E+  + W +M++GY Q    D+A ++FD 
Sbjct: 174 A-----RTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228

Query: 249 MCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR 308
           M  +      V++  ++  Y Q G+ + A E+    E + + P V     MISG  Q G 
Sbjct: 229 MPEKT----EVSWTSMLMGYVQNGRIEDAEEL---FEVMPVKP-VIACNAMISGLGQKGE 280

Query: 309 TS-------------------------------QALDLFKEMSFVGVMPNGVTITSAISA 337
            +                               +ALDLF  M   GV P   T+ S +S 
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C  L +L  G ++H+  V+  F  DV V + L+ MY KC EL  ++ +FD    KD+  W
Sbjct: 341 CASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMW 400

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQES-DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMG 456
           NS+I+GY   G   +A ++F +M  S    PN +T+   +S     G  +E + +++ M 
Sbjct: 401 NSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESME 460

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               VK  TA +  ++    + G+ N A+ +   M      P+     S+L AC
Sbjct: 461 SVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSM---TVEPDAAVWGSLLGAC 511



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 150/319 (47%), Gaps = 32/319 (10%)

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
             N  I   S+  ++  A ++FD    K + SWNSM+AGY        A +LF +M +  
Sbjct: 19  TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR- 77

Query: 425 VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
              N+I+WN L+SGY++NG  DEA  +F  M      +RN  SW +L+ GY   G+ + A
Sbjct: 78  ---NIISWNGLVSGYMKNGEIDEARKVFDLMP-----ERNVVSWTALVKGYVHNGKVDVA 129

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM-NSLID 543
             +F KM         V ++  L          ++ +   C L   +     +   S+I 
Sbjct: 130 ESLFWKMPEKNKVSWTVMLIGFL-------QDGRIDD--ACKLYEMIPDKDNIARTSMIH 180

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGT 603
              K G +  +R IFD MS + +ITW +++ GY  +     A  +FD M     +    +
Sbjct: 181 GLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVS 236

Query: 604 FLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
           + S+++ +   G ++  +++F    E   + P+I   +AMI   G+ G++ +A    + M
Sbjct: 237 WTSMLMGYVQNGRIEDAEELF----EVMPVKPVIA-CNAMISGLGQKGEIAKARRVFDSM 291

Query: 664 PIEPDSSIWEALLTACRIH 682
               D+S W+   T  +IH
Sbjct: 292 KERNDAS-WQ---TVIKIH 306



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 23/206 (11%)

Query: 526 VLRRSLESSLP--VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
           +LRR+  +++P    N  I   ++ G I  +R +FD   SK I +WNS++ GY  +    
Sbjct: 6   LLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPR 65

Query: 584 AALDLFDQMKSFGLKPNRG--TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
            A  LFD+M      P+R   ++  ++  +   G +D  +KVF  + E   +      ++
Sbjct: 66  DARKLFDEM------PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV-----SWT 114

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
           A++  Y  +GK++ A      MP E +   W  +L      G ID A     +L+++ P 
Sbjct: 115 ALVKGYVHNGKVDVAESLFWKMP-EKNKVSWTVMLIGFLQDGRIDDAC----KLYEMIPD 169

Query: 702 DVLIQRLILQIYAIC--GKPEDALKV 725
              I R  + I+ +C  G+ ++A ++
Sbjct: 170 KDNIARTSM-IHGLCKEGRVDEAREI 194


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 242/786 (30%), Positives = 388/786 (49%), Gaps = 81/786 (10%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           + +++  +LQ+C   GD   GK +H  +IK G        N +L  YVK   L  A + F
Sbjct: 43  NTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLF 102

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI------------ 263
           + M +++ V++ ++I GY Q     EA  LF ++  E  +L    F+             
Sbjct: 103 DEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAK 162

Query: 264 -----------------------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
                                  LI  Y+  G  + A ++   +E      D+ +WT M+
Sbjct: 163 LGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIE----YKDMVSWTGMV 218

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           + + +N    ++L LF  M  VG  PN  T  S + AC  L+   +G  +H  A K  + 
Sbjct: 219 ACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYL 278

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
           +++ VG  LI++Y K  +++ A +VF+ +   DV  W+ MIA Y Q+    +A E+F +M
Sbjct: 279 EELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRM 338

Query: 421 QESDVPPNVITWNVLISGY-----IQNGNE-----------------DEAVDLFQRMGK- 457
           +   V PN  T   L+        +Q GN+                 +  +D++ + G+ 
Sbjct: 339 RRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRM 398

Query: 458 -------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                  ++       SWN++I GY Q G    AL +F+ M         VT  SVL AC
Sbjct: 399 ENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRAC 458

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
           A + A     +IH   ++   + +  V N+LID YAK GNI  +R +FD +   D ++WN
Sbjct: 459 AGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWN 518

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC 630
           ++I GY +HG +  AL  F+ M     KP++ TF+ I+ A S AG++D G+  F S+ E 
Sbjct: 519 AMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEE 578

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
           Y I P  EHY+ M+ L GRSG L++A + + ++P EP   +W ALL+AC IH +++L  +
Sbjct: 579 YDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRI 638

Query: 691 AIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVY 750
           + +R+ ++EP D     L+  IYA   +  +   +R   +    R   G  WIE +  V+
Sbjct: 639 SAQRVLEIEPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVH 698

Query: 751 TFVTGGWSESYSDLLYSWLQNVPENVTARS-------SHSGLCIEEEEKEEISGIHSEKL 803
            F  G  S   + L+   L+ +  N+ AR+       S   L +E+ +KE+   +HSE+L
Sbjct: 699 YFSVGDTSHPDTKLINGMLEWL--NMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERL 756

Query: 804 ALAFALIGS-SQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQC 862
           ALA+ LI + S +P  +RI+KN+R+C  CH   K +S +   +I + D    HHF  G C
Sbjct: 757 ALAYGLIRTPSISP--LRIIKNLRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGIC 814

Query: 863 SCGDYW 868
           SCGDYW
Sbjct: 815 SCGDYW 820



 Score =  194 bits (492), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 148/527 (28%), Positives = 246/527 (46%), Gaps = 82/527 (15%)

Query: 58  NTYI--NLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVF 114
           NTYI  +LLQ+CI +      + LH   +     +D+F    LL+ Y K   L DA ++F
Sbjct: 43  NTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLF 102

Query: 115 EDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE 174
           ++M +RN  ++  +I  YS+  R+ E + LF  +  +G   + F+F  +L+   +    +
Sbjct: 103 DEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAK 162

Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
            G  +H+ V KLG      V  +++  Y  CG    AR+ F++++ KD V+W  M++ Y 
Sbjct: 163 LGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYV 222

Query: 235 QIGENDEAHRLFDKMCREEIK-------------LGVVTFNI------------------ 263
           +    +E+ +LF +M     K             +G+  FN+                  
Sbjct: 223 ENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELF 282

Query: 264 ----LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
               LI  Y + G  D A+++ + M       DV  W+ MI+ +AQ+ ++ +A+++F  M
Sbjct: 283 VGVELIDLYIKSGDVDDALQVFEEMPK----DDVIPWSFMIARYAQSEQSEEAIEMFCRM 338

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
               V+PN  T+ S + AC  L  L +G +IH   VK+G   +V V N+L++MY+KC  +
Sbjct: 339 RRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRM 398

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------- 432
           E + ++F    +    SWN++I GY QAG   KA  LF  M E  V    +T+       
Sbjct: 399 ENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRAC 458

Query: 433 ----------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                                       N LI  Y + GN  +A  +F  + ++D+V   
Sbjct: 459 AGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQV--- 515

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
             SWN++I+GY   G    AL  F  M  +   P+ VT + +L AC+
Sbjct: 516 --SWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACS 560



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 167/350 (47%), Gaps = 42/350 (12%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH--AFLNLVTEIDVF 92
           N    E++ +   +   G K    T+ ++L+AC+     ++ + +H  AF     E ++F
Sbjct: 224 NECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLE-ELF 282

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V  +L+ +Y K G +DDA +VFE+M + ++  WS MI  Y++ ++  E +E+F  M +  
Sbjct: 283 VGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGL 342

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P+ F    +LQAC +  D + G  +H  V+K+G+     V N+++ +Y KCG++  + 
Sbjct: 343 VLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSL 402

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + F        V+WN++I GY Q G  ++A  LF  M   +++   VT++ ++R+   + 
Sbjct: 403 QLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIA 462

Query: 273 QCDVAMEMVKRMESLGITP-----------------------------------DVFTWT 297
               A+E   ++ SL +                                     D  +W 
Sbjct: 463 ----ALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWN 518

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
            MISG++ +G   +AL  F+ M      P+ VT    +SAC++   L  G
Sbjct: 519 AMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRG 568



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 179/386 (46%), Gaps = 55/386 (14%)

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
           A+R      + + Y + S++    + G C     L  ++ +     ++   N+L++ Y++
Sbjct: 32  AQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVK 91

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
             +  +A  LF  M       RNT S+ +LI GY Q  + + A+G+F ++Q      N  
Sbjct: 92  YDSLPDAAKLFDEMPD-----RNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPF 146

Query: 502 TILSVLPACAYLVASNKVK---EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
              +VL     LV++   K    +H CV +   +S   V  +LID Y+  G    +R +F
Sbjct: 147 VFSTVLK---LLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVF 203

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           D +  KD+++W  ++  YV +  +  +L LF +M+  G KPN  TF S++ A     + +
Sbjct: 204 DAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFN 263

Query: 619 LGKKVF-CSITECY--QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW--- 672
           +GK V  C+    Y  ++   +E    +IDLY +SG +++A++  E+MP + D   W   
Sbjct: 264 VGKAVHGCAFKTSYLEELFVGVE----LIDLYIKSGDVDDALQVFEEMP-KDDVIPWSFM 318

Query: 673 -----------EALLTACRIHGNIDLA--------VLAIERLFDLEPG------------ 701
                      EA+   CR+   + L         + A   L DL+ G            
Sbjct: 319 IARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGL 378

Query: 702 --DVLIQRLILQIYAICGKPEDALKV 725
             +V +   ++ +YA CG+ E++L++
Sbjct: 379 DMNVFVSNALMDMYAKCGRMENSLQL 404


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 227/724 (31%), Positives = 363/724 (50%), Gaps = 81/724 (11%)

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
           M +++ V++ ++I GY Q  + DE   LF ++ RE  +L    F  +++    +   ++A
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 278 MEMVKRMESLGITPDVF-------------------------------TWTCMISGFAQN 306
             +   +  LG   + F                               +WT M++ +A+N
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
            R   +L LF EM  VG  PN  T    + AC  L+A ++G  +H   +K  +  D+ VG
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
             L+++Y+K  +     RVF+ +   DV  W+ MI+ Y Q+    +A ELF +M+ + V 
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVL 240

Query: 427 PNVITW-----------------------------------NVLISGYIQNGNEDEAVDL 451
           PN  T+                                   N L+  Y + G  D ++ L
Sbjct: 241 PNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKL 300

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           F  +       RN  +WN++I GY Q G  + AL +++ M       + VT  SVL ACA
Sbjct: 301 FMELPN-----RNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACA 355

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
            L A     +IH   L+   +  + V N+LID YAK G+I  +R +FD +S +D I+WN+
Sbjct: 356 SLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNA 415

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
           +I GY +HG    AL  F  M+     PN+ TF+SI+ A S AG++D+G+  F S+ + Y
Sbjct: 416 MISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDY 475

Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
            I P +EHY+ M+ L GRSG L++A++ IE++P+EP+  +W ALL AC IH ++DL +++
Sbjct: 476 GIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMS 535

Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
            +++  ++P D     L+  IYA   +      VRK  +    +   G  WIE + +V+ 
Sbjct: 536 AQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHY 595

Query: 752 FVTGGWSESYSDL-----LYSWLQNVPENVTARSSHSGLC--IEEEEKEEISGIHSEKLA 804
           F  G    S+ D+     +  WL    E        + +   +E++EK+    +HSE+LA
Sbjct: 596 FSVG--DTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLA 653

Query: 805 LAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
           LAF LI +    H IRI+KN+R+C  CH   K +S +   +I + D    HHF++G CSC
Sbjct: 654 LAFGLIRTPSRGH-IRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSC 712

Query: 865 GDYW 868
           GDYW
Sbjct: 713 GDYW 716



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 251/510 (49%), Gaps = 43/510 (8%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKT 95
           +L+E + +   +  +G ++    +  +L+  +      LA  LHA    L  E + FV T
Sbjct: 21  QLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIYKLGHESNAFVGT 80

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            L+  YA CG ++ AR+ F+ +  +++ +W+ M+  Y+ + R+++ ++LF  M   G  P
Sbjct: 81  ALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNP 140

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           + F F  +L+AC     F  GK +H  V+K        V   +L +Y K G      R F
Sbjct: 141 NHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVF 200

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR--------------------EEIK 255
           E M + D + W+ MIS Y Q  ++ EA  LF +M R                    E ++
Sbjct: 201 EEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIENLQ 260

Query: 256 LG---------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
           LG               V   N L+  Y + G+ D +M++   + +     +  TW  MI
Sbjct: 261 LGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPN----RNEVTWNTMI 316

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
            G+ Q+G   +AL L+K M    V  + VT +S + AC  L A+ +G +IHSL++K  + 
Sbjct: 317 VGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQIHSLSLKTIYD 376

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            DV+VGN+LI+MY+KC  ++ A  VFDM+ ++D  SWN+MI+GY   G  G+A + F  M
Sbjct: 377 KDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLVGEALKAFQMM 436

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
           QE++  PN +T+  ++S     G  D   + F+ M ++  ++     +  ++    + G 
Sbjct: 437 QETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGH 496

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            + A+ +  ++      PN     ++L AC
Sbjct: 497 LDKAVKLIEEIP---LEPNVKVWRALLGAC 523



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 215/465 (46%), Gaps = 79/465 (16%)

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M +RN  ++  +I  Y +  +  EVV+LF  + ++G   + F+F  IL+   +    E  
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
             +H+ + KLG      V  +++  Y  CG +  AR+ F+++  KD V+W  M++ Y + 
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 237 GENDEAHRLFDKMCREEIK-------------LGVVTFNI-------------------- 263
               ++ +LF +M                   +G+  F++                    
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 264 --LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
             L+  Y + G  +  + + + M       DV  W+ MIS +AQ+ ++ +A++LF +M  
Sbjct: 181 VGLLDLYTKFGDANDVLRVFEEMPK----HDVIPWSFMISRYAQSNQSREAVELFGQMRR 236

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
             V+PN  T  S + +C  ++ L +G ++H   +K+G   +V V N+L+++Y+KC  L+ 
Sbjct: 237 AFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDN 296

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------- 432
           + ++F  + +++  +WN+MI GY Q+G   KA  L+  M E  V  + +T+         
Sbjct: 297 SMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACAS 356

Query: 433 --------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                     N LI  Y + G+   A  +F  + + D++     
Sbjct: 357 LAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEI----- 411

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           SWN++I+GY   G    AL  F+ MQ +   PN +T +S+L AC+
Sbjct: 412 SWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACS 456



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 171/349 (48%), Gaps = 40/349 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           N R  +++ +   +   G      T+  +L+ACI   +  + + +H   L    E+D++V
Sbjct: 120 NDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYV 179

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              LL +Y K G  +D   VFE+M + ++  WS MI  Y++  + RE VELF  M +  +
Sbjct: 180 GVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFV 239

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+ F F  +LQ+C +  + + GK +H  V+K+G+     V N+++ VY KCG+L  + +
Sbjct: 240 LPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMK 299

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F  +  ++ V WN+MI GY Q G+ D+A  L+  M   +++   VT++ ++R+   L  
Sbjct: 300 LFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLA- 358

Query: 274 CDVAMEMVKRMESLGITP-----------------------------------DVFTWTC 298
              AME+  ++ SL +                                     D  +W  
Sbjct: 359 ---AMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNA 415

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
           MISG++ +G   +AL  F+ M     +PN +T  S +SAC++   L +G
Sbjct: 416 MISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIG 464


>gi|347954478|gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
          Length = 794

 Score =  374 bits (961), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 222/752 (29%), Positives = 399/752 (53%), Gaps = 41/752 (5%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV 91
           LC NG + EA++++  +  +  ++    Y  +LQ C+    +   +++HA   ++ + D 
Sbjct: 9   LCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHA--QILKKGDF 66

Query: 92  F-----VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
           +     ++TKL+  YAKC  L+ A+ +F  +R RN+++W+A+IG   R       +  F 
Sbjct: 67  YARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFV 126

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M+++G+FPD+F+ P + +ACG       G+ +H  V K G+     V +S+  +Y KCG
Sbjct: 127 EMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCG 186

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            L  AR+ F+ + +++ VAWN+++ GY Q G N+EA RL  +M +E I+   VT +  + 
Sbjct: 187 VLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLS 246

Query: 267 SYNQLGQCDV-----AMEMVKRME---SLG-----------------------ITPDVFT 295
           +   +G  +      A+ +V  +E    LG                       I  DV T
Sbjct: 247 ASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVT 306

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  +ISG+ Q G   +A+ + + M    +  + VT+++ +SA T  + L +G EI    +
Sbjct: 307 WNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCI 366

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           + G   D+++ ++ ++MY+KC  +  A++VFD    KD+  WN++++ Y  +G  G+A  
Sbjct: 367 RHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALR 426

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           LF +MQ   VPPNVITWN++I   ++NG  +EA ++F +M ++  +  N  SW +++ G 
Sbjct: 427 LFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQM-QSSGIFPNLISWTTMMNGL 485

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES-S 534
            Q G    A+   RKMQ S   PN  TI   L ACA L + +  + IHG ++R    S S
Sbjct: 486 VQNGCSEEAILFLRKMQESRLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYSFS 545

Query: 535 LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
             +  SL+D YAK G+I  +  +F      ++  +N++I  Y L+G    A+ L+  ++ 
Sbjct: 546 ASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLED 605

Query: 595 FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLE 654
            G+KP+  T  S+ L+ +    V+   +VF  +   + + P +EHY  M+DL   +G+ +
Sbjct: 606 GGVKPDNITITSL-LSCNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLASAGETD 664

Query: 655 EAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYA 714
           +A+  +E+MP +PD+ + ++L  +C      +L     + L + EP +     +I   YA
Sbjct: 665 KALRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMISNAYA 724

Query: 715 ICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
           + G  ++  K+R++ +    +   G  WI++K
Sbjct: 725 VEGSWDEVAKMREMMKVKGLKKKPGCSWIQIK 756



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 8/200 (4%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFL- 83
           T ++ L  NG   EAI  L  +  Q +++R N  T    L AC +  S+H  R +H ++ 
Sbjct: 480 TMMNGLVQNGCSEEAILFLRKM--QESRLRPNAFTITVALSACANLASLHFGRSIHGYII 537

Query: 84  -NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
            N        ++T L+ +YAKCG ++ A  VF       L  ++AMI AY+   + RE +
Sbjct: 538 RNQQYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAI 597

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
            L+  +   G+ PD+     +L +C    D  +A ++   +V K GM         ++ +
Sbjct: 598 TLYRSLEDGGVKPDNITITSLL-SCNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDL 656

Query: 202 YVKCGKLIWARRFFESMDEK 221
               G+   A R  E M  K
Sbjct: 657 LASAGETDKALRLMEEMPYK 676


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 213/613 (34%), Positives = 329/613 (53%), Gaps = 36/613 (5%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++F W  MI G   N     A++ +  M   G +PN  T    + AC  L  L +G++I
Sbjct: 75  PNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKI 134

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H+L VK GF  DV V  SL+ +Y+KC  LE A +VFD I DK+V SW ++I+GY   G  
Sbjct: 135 HTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKF 194

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA---------------------- 448
            +A ++F ++ E ++ P+  T   ++S   Q G+ +                        
Sbjct: 195 REAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSL 254

Query: 449 VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           VD++ + G  +K +        ++  SW ++I GY   G    A+ +F +MQ     P+C
Sbjct: 255 VDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDC 314

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
            T++ VL ACA L A    + + G V R     +  +  +LID YAK G++  +  +F G
Sbjct: 315 YTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKG 374

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           M  KD + WN++I G  ++G+   +  LF Q++  G+KP+  TF+ ++   + AG+VD G
Sbjct: 375 MKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEG 434

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
           ++ F S+   + + P IEHY  M+DL GR+G L+EA + I +MP+E ++ +W ALL ACR
Sbjct: 435 RRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACR 494

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           IH +  LA LA+++L +LEP +     L+  IY+   K ++A KVR    E   +   G 
Sbjct: 495 IHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGC 554

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEI 795
            WIEV  +V+ F+ G      S+ +Y+ L  + + +        +      IEEEEKE  
Sbjct: 555 SWIEVDGIVHEFLVGDKYHPLSEKIYAKLDELTKKMKVAGYVPTTDFVLFDIEEEEKEHF 614

Query: 796 SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
            G HSEKLA+AF LI S+     IR+VKN+R+C  CH   K +S +   EI + D+   H
Sbjct: 615 LGCHSEKLAIAFGLI-SATPTAVIRVVKNLRVCGDCHMAIKLISSITGREITVRDNNRFH 673

Query: 856 HFKNGQCSCGDYW 868
            F+ G CSC DYW
Sbjct: 674 CFREGSCSCNDYW 686



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 215/434 (49%), Gaps = 38/434 (8%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
            R +F  +++ N++ W+ MI     +  + + +E + LM  +G  P++F FP +L+AC  
Sbjct: 65  TRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACAR 124

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
             D + G  +H+LV+K G  C   V+ S++ +Y KCG L  A + F+ + +K+ V+W ++
Sbjct: 125 LLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAI 184

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI--LIRSYNQLG---------QCDVAM 278
           ISGY  +G+  EA  +F ++   E+ L   +F I  ++ +  QLG         +C + M
Sbjct: 185 ISGYIGVGKFREAIDMFRRLL--EMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEM 242

Query: 279 EMVK----------------RMESL-----GIT-PDVFTWTCMISGFAQNGRTSQALDLF 316
            MV+                 ME       G+   D+ +W  MI G+A NG   +A+DLF
Sbjct: 243 GMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLF 302

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
            +M    V P+  T+   +SAC  L AL +G  +  L  +  F  + ++G +LI++Y+KC
Sbjct: 303 LQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKC 362

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
             +  A  VF  +K+KD   WN++I+G    GY   ++ LF ++++  + P+  T+  L+
Sbjct: 363 GSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLL 422

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
            G    G  DE    F  M +   +  +   +  ++    + G  + A  + R M     
Sbjct: 423 CGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEA- 481

Query: 497 YPNCVTILSVLPAC 510
             N +   ++L AC
Sbjct: 482 --NAIVWGALLGAC 493



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 227/489 (46%), Gaps = 43/489 (8%)

Query: 18  KKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLAR 77
           K+ N    +T +  L  N   ++AI     + ++G      T+  +L+AC     + L  
Sbjct: 73  KQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGV 132

Query: 78  KLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQ 136
           K+H  +     + DVFVKT L+ +YAKCG L+DA +VF+D+ ++N+ +W+A+I  Y    
Sbjct: 133 KIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVG 192

Query: 137 RWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRN 196
           ++RE +++F  +++  L PD F   ++L AC   GD  +G+ +H  ++++GM     V  
Sbjct: 193 KFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGT 252

Query: 197 SVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK- 255
           S++ +Y KCG +  AR  F+ M EKD V+W +MI GY   G   EA  LF +M RE +K 
Sbjct: 253 SLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKP 312

Query: 256 -----LGVVT------------------------FN-----ILIRSYNQLGQCDVAMEMV 281
                +GV++                        +N      LI  Y + G    A E+ 
Sbjct: 313 DCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVF 372

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
           K M+      D   W  +ISG A NG    +  LF ++  +G+ P+G T    +  CT  
Sbjct: 373 KGMKE----KDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHA 428

Query: 342 KALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNS 399
             +  G    +S+      T  +     ++++  +   L EA + + +M  + +   W +
Sbjct: 429 GLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGA 488

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           ++ G C+     +  EL +K      P N   + +L + Y  N   DEA  +   M +  
Sbjct: 489 LL-GACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSMNEKR 547

Query: 460 KVKRNTASW 468
             K    SW
Sbjct: 548 IQKPPGCSW 556



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 12/163 (7%)

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
           Y+R +F  +   +I  WN++I G V +  +  A++ +  M+S G  PN  TF  ++ A +
Sbjct: 64  YTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACA 123

Query: 613 LAGMVDLGKKVFCSIT----ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
               + LG K+   +     +C   +      ++++ LY + G LE+A +  +D+P + +
Sbjct: 124 RLLDLQLGVKIHTLVVKGGFDCDVFVK-----TSLVCLYAKCGYLEDAHKVFDDIP-DKN 177

Query: 669 SSIWEALLTACRIHGNIDLAVLAIERLFD--LEPGDVLIQRLI 709
              W A+++     G    A+    RL +  L P    I R++
Sbjct: 178 VVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVL 220


>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Vitis vinifera]
          Length = 788

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 222/692 (32%), Positives = 373/692 (53%), Gaps = 47/692 (6%)

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           +T  +      ++S +AK G + DAR++F+ M +RN+ +W++MI AY  + R  E  +LF
Sbjct: 41  MTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEARQLF 100

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M    L+    +   I     N    +A  L + L  K    C     N+++A Y K 
Sbjct: 101 DKMPTRDLYSWTLM---ITCYTRNGELAKARNLFNLLPYKWNPVCC----NAMVAGYAKN 153

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            +   ARR F++M  KD V+WNSM++GY + GE     + F++M   +    VV++N+++
Sbjct: 154 RQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERD----VVSWNLMV 209

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             + ++G  + + E  +++ +    P+  +W  M+ GFA+ G+ ++A  LF +M    V+
Sbjct: 210 DGFVEVGDLNSSWEFFEKIPN----PNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVV 265

Query: 326 PNGVTITSAISACTDLKALAMGMEI---HSLA--------VKMGFTDD------------ 362
                I + +  C   +A+++ ME+   +S++        V+MG  D+            
Sbjct: 266 AWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRN 325

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V    ++I+ Y + + ++ A ++F+ I  +DV  WN+MIAGY Q G   +A  LF +M +
Sbjct: 326 VAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVK 385

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
            D+    ++WN +++ Y Q G  D A+ +F+ M +     +N  SWNSLI+G  Q G   
Sbjct: 386 KDI----VSWNTMVASYAQVGQMDAAIKIFEEMKE-----KNIVSWNSLISGLTQNGSYL 436

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
           +AL  F  M      P+  T    L +CA+L A    K++H  V++    + L V N+LI
Sbjct: 437 DALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALI 496

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
             YAK G+I  +  +F  +   D+++WNSLI  Y L+G    AL LF +M+  G+ P+  
Sbjct: 497 TMYAKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEV 556

Query: 603 TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           TF+ I+ A S  G++D G K+F  + + Y I P+ EHY+ M+DL GR+G+LEEA + +  
Sbjct: 557 TFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRG 616

Query: 663 MPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDA 722
           M I  ++ IW ALL ACRIHGN++LA  A E+L + EP       L+  + A  G+ ++ 
Sbjct: 617 MKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEV 676

Query: 723 LKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
            +VR+L +E       G  WIE++N V+ F++
Sbjct: 677 ARVRRLMKEKGAEKQPGWSWIELQNRVHAFLS 708



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 128/528 (24%), Positives = 255/528 (48%), Gaps = 55/528 (10%)

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           K G++  A + F+ M  K+ V  NSMIS + + G   +A +LFD M +  I    V++N 
Sbjct: 27  KSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNI----VSWNS 82

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           +I +Y    + + A ++  +M     T D+++WT MI+ + +NG  ++A +LF  + +  
Sbjct: 83  MIAAYLHNDRVEEARQLFDKMP----TRDLYSWTLMITCYTRNGELAKARNLFNLLPYKW 138

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
              N V   + ++     +      E   L   M    D++  NS++  Y++  E+    
Sbjct: 139 ---NPVCCNAMVAGYAKNRQFD---EARRLFDAMP-AKDLVSWNSMLTGYTRNGEMRLGL 191

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
           + F+ + ++DV SWN M+ G+ + G    ++E F K+      PN ++W  ++ G+ + G
Sbjct: 192 QFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPN----PNTVSWVTMLCGFARFG 247

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
              EA  LF +M       RN  +WN++IA Y Q    + A+ +F +M       N ++ 
Sbjct: 248 KIAEARRLFDQMP-----IRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEK----NSISW 298

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
            +V+     +   ++ +++   +  R++ +      ++I  Y ++  +  +R IF+ +S 
Sbjct: 299 TTVINGYVRMGKLDEARQLLNQMPYRNVAAQ----TAMISGYVQNKRMDDARQIFNQISI 354

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           +D++ WN++I GY   G    AL LF QM    +K +  ++ +++ +++  G +D   K+
Sbjct: 355 RDVVCWNTMIAGYSQCGRMDEALHLFKQM----VKKDIVSWNTMVASYAQVGQMDAAIKI 410

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE---PDSSIWEALLTACR 680
           F  + E       I  ++++I    ++G   +A++    M  E   PD S +   L++C 
Sbjct: 411 FEEMKE-----KNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSC- 464

Query: 681 IHGNIDLAVLAIERLFD---LEPG---DVLIQRLILQIYAICGKPEDA 722
                 LA L + +      ++ G   D+ +   ++ +YA CG    A
Sbjct: 465 ----AHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSA 508



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 147/357 (41%), Gaps = 85/357 (23%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           N  ++EAI++   +  + +     ++  ++   +    +  AR+L   LN +   +V  +
Sbjct: 277 NCHVDEAISLFMEMPEKNSI----SWTTVINGYVRMGKLDEARQL---LNQMPYRNVAAQ 329

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T ++S Y +   +DDAR++F  +  R++  W+ MI  YS+  R  E + LF  MV+  + 
Sbjct: 330 TAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIAGYSQCGRMDEALHLFKQMVKKDIV 389

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
                                                    N+++A Y + G++  A + 
Sbjct: 390 S---------------------------------------WNTMVASYAQVGQMDAAIKI 410

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------- 261
           FE M EK+ V+WNS+ISG  Q G   +A + F  M  E  K    TF             
Sbjct: 411 FEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAAL 470

Query: 262 ----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                                 N LI  Y + G    A  + K ++      DV +W  +
Sbjct: 471 QVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHF----DVVSWNSL 526

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           I+ +A NG   +AL LF +M   GV P+ VT    +SAC+ +  +  G+++    V+
Sbjct: 527 IAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQ 583


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 259/809 (32%), Positives = 405/809 (50%), Gaps = 106/809 (13%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM--SCVRRVRNSVLAVYVKCGKLIWARR 213
           D    P  +++     D  + + +H+  ++ G+       V N++L  Y +CG+L  A  
Sbjct: 58  DHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALE 117

Query: 214 FFESMDEK--DGVAWNSMISGYFQIGENDE-----------AHRLFD------------- 247
            F S+ +   D V++NS+IS        D             H L               
Sbjct: 118 VFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHL 177

Query: 248 -------KMCREE----IKLGVV------TFNILIRSYNQLGQCDVAMEMVKRMESLGIT 290
                  ++ RE     +K G++       FN L+  Y +LG    A  +       G T
Sbjct: 178 PAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFA-----GAT 232

Query: 291 P---DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
           P   DV TW  M+S   Q+G   +A+    +M  +GV P+GVT  SA+ AC+ L+ L +G
Sbjct: 233 PGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVG 292

Query: 348 MEIHSLAVKMGFTDDVLVGNS-----LINMYSKCEELEAAERVFDMIKD--KDVYSWNSM 400
            E+H+  +K    DD L  NS     L++MY+  E++  A +VFDM+ D  K +  WN+M
Sbjct: 293 REMHAYVIK----DDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAM 348

Query: 401 IAGYCQAGYCGKAYELFIKMQESD--VPPNVITWNVL--------------ISGYI---- 440
           I GY QAG   +A  LF +M+     VP      +VL              + GY+    
Sbjct: 349 ICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRG 408

Query: 441 QNGN---EDEAVDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFR 489
             GN   ++  +D++ R+GK D  +R        +  SWN+LI G    G   +A  + R
Sbjct: 409 MAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAR 468

Query: 490 KMQS---SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
           +MQ        PN +T++++LP CA L A  + KEIHG  +R +L++ + V ++L+D YA
Sbjct: 469 EMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYA 528

Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG-LKPNRGTFL 605
           K G +  SR +FD +  ++ ITWN LI  Y +HG    A  LFD+M + G  +PN  TF+
Sbjct: 529 KCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFM 588

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
           + + A S +GMVD G ++F ++   + + P  +  + ++D+ GR+G+L+EA   +  M  
Sbjct: 589 AALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMET 648

Query: 666 -EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
            E   S W  +L ACR+H N+ L  +A ERL +LEP +     L+  IY+  G+   A +
Sbjct: 649 GEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAE 708

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS-----WLQNVPENVTAR 779
           VR   R        G  WIEV   ++ F+ G  +   S+ +++     W + V    T  
Sbjct: 709 VRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPD 768

Query: 780 SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVS 839
           +S     +++ +K  +   HSEKLA+AF L+ ++    TIR+ KN+R+C  CHE AK++S
Sbjct: 769 TSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGA-TIRVAKNLRVCNDCHEAAKFLS 827

Query: 840 MMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            M   EI L D +  HHF+NGQCSCGDYW
Sbjct: 828 KMVGREIVLRDVRRFHHFRNGQCSCGDYW 856



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 218/456 (47%), Gaps = 56/456 (12%)

Query: 59  TYINLLQAC----IDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAR 111
           T +++L+A       + ++ L R+ HAF     L+     F    LLS+YA+ G + DA+
Sbjct: 166 TLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQ 225

Query: 112 EVFEDMR--ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
            +F        ++ TW+ M+    +   + E V+  + MV  G+ PD   F   L AC  
Sbjct: 226 RLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSR 285

Query: 170 CGDFEAGKLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE--KDGVAW 226
               + G+ MH+ VIK   ++    V ++++ +Y    ++  AR+ F+ + +  K    W
Sbjct: 286 LELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMW 345

Query: 227 NSMISGYFQIGENDEAHRLFDKM--------------------CREE------------I 254
           N+MI GY Q G ++EA RLF +M                     R E            +
Sbjct: 346 NAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVV 405

Query: 255 KLGVV----TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTS 310
           K G+       N L+  Y +LG+ DVA    +R+ ++   PDV +W  +I+G    G  +
Sbjct: 406 KRGMAGNRFVQNALMDMYARLGKTDVA----RRIFAMVDLPDVVSWNTLITGCVVQGHVA 461

Query: 311 QALDLFKEMSFV---GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
            A  L +EM  +   GV+PN +T+ + +  C  L A A G EIH  AV+     DV VG+
Sbjct: 462 DAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGS 521

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES-DVP 426
           +L++MY+KC  L  +  VFD +  ++  +WN +I  Y   G  G+A  LF +M  S +  
Sbjct: 522 ALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEAR 581

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
           PN +T+   ++    +G  D  + LF  M ++  V+
Sbjct: 582 PNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVE 617



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 150/589 (25%), Positives = 249/589 (42%), Gaps = 85/589 (14%)

Query: 76  ARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE--RNLYTWSAMIG 130
           AR +HA      L+      V   LL+ YA+CG L  A EVF  + +   +  +++++I 
Sbjct: 78  ARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLIS 137

Query: 131 AYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA----GKLMHSLVIKL 186
           A    +RW   +     M+  G     F    +L+A  +     A    G+  H+  +K 
Sbjct: 138 ALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKN 197

Query: 187 GM--SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG--VAWNSMISGYFQIGENDEA 242
           G+     R   N++L++Y + G +  A+R F       G  V WN+M+S   Q G  DEA
Sbjct: 198 GLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEA 257

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME----------------------- 279
            +    M    ++   VTF   + + ++L   DV  E                       
Sbjct: 258 VQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVD 317

Query: 280 MVKRMESLGITPDVF-----------TWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPN 327
           M    E +G    VF            W  MI G+AQ G   +AL LF  M +  G +P 
Sbjct: 318 MYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPC 377

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             T+ S + AC   +A A    +H   VK G   +  V N+L++MY++  + + A R+F 
Sbjct: 378 ETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFA 437

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ---ESDVPPNVITWNVLISG-----Y 439
           M+   DV SWN++I G    G+   A++L  +MQ   E  V PN IT   L+ G      
Sbjct: 438 MVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAA 497

Query: 440 IQNGNE-----------------DEAVDLFQRMG-------KNDKV-KRNTASWNSLIAG 474
              G E                    VD++ + G         D++ +RNT +WN LI  
Sbjct: 498 PARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMA 557

Query: 475 YQQLGQKNNALGVFRKMQSSC-FYPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLE 532
           Y   G    A  +F +M +S    PN VT ++ L AC++  +    ++  H       +E
Sbjct: 558 YGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVE 617

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS--KDIITWNSLICGYVLH 579
            +  ++  ++D   ++G +  +  +   M +  + +  W++++    LH
Sbjct: 618 PTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLH 666



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 219/490 (44%), Gaps = 52/490 (10%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +  L  +G  +EA+  L  +   G +    T+ + L AC     + + R++HA++  
Sbjct: 242 NTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIK 301

Query: 86  VTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRE--RNLYTWSAMIGAYSRDQRWREV 141
             E+  + FV + L+ +YA    +  AR+VF+ + +  + L  W+AMI  Y++     E 
Sbjct: 302 DDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEA 361

Query: 142 VELFFLM-VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
           + LF  M  + G  P +     +L AC     F   + +H  V+K GM+  R V+N+++ 
Sbjct: 362 LRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMD 421

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y + GK   ARR F  +D  D V+WN++I+G    G   +A +L  +M  ++++ G V 
Sbjct: 422 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREM--QQLEEGGVV 479

Query: 261 FNIL--------------------IRSY--NQLGQCDVA-----MEMVKRMESLGITPDV 293
            N +                    I  Y        DVA     ++M  +   L ++  V
Sbjct: 480 PNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAV 539

Query: 294 F---------TWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKA 343
           F         TW  +I  +  +G   +A  LF  M+  G   PN VT  +A++AC+    
Sbjct: 540 FDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGM 599

Query: 344 LAMGMEI-HSLAVKMGF--TDDVLVGNSLINMYSKCEELEAAERVFDMIK--DKDVYSWN 398
           +  G+++ H++    G   T D+L    ++++  +   L+ A  +   ++  ++ V +W+
Sbjct: 600 VDRGLQLFHAMERDHGVEPTPDILA--CVVDILGRAGRLDEAYAMVTSMETGEQQVSAWS 657

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           +M+ G C+        E+  +      P     + +L + Y   G    A ++  RM + 
Sbjct: 658 TML-GACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRR 716

Query: 459 DKVKRNTASW 468
              K    SW
Sbjct: 717 GVAKEPGCSW 726


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 263/878 (29%), Positives = 425/878 (48%), Gaps = 118/878 (13%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEID-VFVKTKLLSVYAKCGCLDDAREVFE-DMRE 119
           + L++C    ++  AR LH  L  V     VF++  LL  Y  CG L DAR +   D++E
Sbjct: 25  DALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKE 84

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQ------DGLFPDDFLFPKILQACGNCG-- 171
            N+ T + M+  Y++     +  ELF  M +      + L  D         +CG  G  
Sbjct: 85  PNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCR 144

Query: 172 -------------DFEAGKLMHSLVIKLGMSC------------VRR----VRNSVLAVY 202
                        DF     + + ++ + + C            + R     RNS+LA Y
Sbjct: 145 ELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGY 204

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
            K   +  A  +FE M E+D V+WN MI+   Q G   EA  L  +M R+ ++L   T+ 
Sbjct: 205 AKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYT 264

Query: 263 I--------------------LIRSYNQLGQ--CDVAMEMVKRMESLGITPDVF------ 294
                                +IRS  Q+        +E+  +  S      VF      
Sbjct: 265 SSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR 324

Query: 295 ---TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
              +WT +I G  Q    S++++LF +M    +  +   + + IS C +   L +G ++H
Sbjct: 325 NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLH 384

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           SL +K G    ++V NSLI++Y+KC +L+ AE V                          
Sbjct: 385 SLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFV-------------------------- 418

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                F  M E D+    ++W  +I+ Y Q GN  +A + F  M       RN  +WN++
Sbjct: 419 -----FSSMSERDI----VSWTSMITAYSQIGNIIKAREFFDGMAT-----RNAITWNAM 464

Query: 472 IAGYQQLGQKNNALGVFRKMQSSC-FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +  Y Q G + + L ++  M S     P+ VT +++   CA + A+    +I G  ++  
Sbjct: 465 LGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAG 524

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           L  ++ V N+ I  Y+K G I  ++ +FD ++ KD+++WN++I GY  HG    A   FD
Sbjct: 525 LILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFD 584

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
            M S G KP+  ++++++   S +G+V  GK  F  +T  + I P +EH+S M+DL GR+
Sbjct: 585 DMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRA 644

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           G L EA + I+ MP++P + +W ALL+AC+IHGN +LA LA + +F+L+  D     L+ 
Sbjct: 645 GHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLA 704

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ 770
           +IY+  GK +D+ +VRKL R+   + + G  W+EV+N V+ F     ++  S      ++
Sbjct: 705 KIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFK----ADDVSHPQVIAIR 760

Query: 771 NVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
           N  + +  + +H G    E  + EI   HSEKLA+AF ++ S  A   I I+KN+R+C  
Sbjct: 761 NKMDELMEKIAHLGYVRTESPRSEIH--HSEKLAVAFGIM-SLPAWMPIHIMKNLRICGD 817

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   K +S +   E  + D    HHFK+G CSCGDYW
Sbjct: 818 CHTVIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 855



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 228/481 (47%), Gaps = 44/481 (9%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           L  +GR+ EA+ ++  +  +G ++   TY + L AC    S+   ++LHA  +  + +ID
Sbjct: 235 LSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQID 294

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            +V + L+ +YAKCG   +A+ VF  +++RN  +W+ +IG   + + + + VELF  M  
Sbjct: 295 PYVASALIELYAKCGSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRA 354

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + +  D F    ++  C N  D   G+ +HSL +K G +    V NS++++Y KCG L  
Sbjct: 355 ELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQN 414

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A   F SM E+D V+W SMI+ Y QIG   +A   FD M         +T+N ++ +Y Q
Sbjct: 415 AEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRN----AITWNAMLGAYIQ 470

Query: 271 LGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G  +  ++M   M S   +TPD  T+  +  G                           
Sbjct: 471 HGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRG--------------------------- 503

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
                   C D+ A  +G +I    VK G   +V V N+ I MYSKC  +  A+++FD++
Sbjct: 504 --------CADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLL 555

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
             KDV SWN+MI GY Q G   +A + F  M      P+ I++  ++SG   +G   E  
Sbjct: 556 NGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGK 615

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
             F  M +   +      ++ ++    + G    A  +  KM      P      ++L A
Sbjct: 616 LYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMP---MKPTAEVWGALLSA 672

Query: 510 C 510
           C
Sbjct: 673 C 673



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 199/476 (41%), Gaps = 83/476 (17%)

Query: 324 VMPNGVT--ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
           ++P+ VT  +  A+ +C    ALA    +H   V +G    V + N+L++ Y  C  L  
Sbjct: 14  LLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSD 73

Query: 382 AERVFDM-IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
           A R+    IK+ +V + N M+ GY + G    A ELF +M   DV     +WN L+S   
Sbjct: 74  ARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVA----SWNTLMSDTS 129

Query: 441 QNGN--------------------------------EDEAVDLFQRMGKND-------KV 461
           +                                   E   VD+F R G  D       ++
Sbjct: 130 RPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQI 189

Query: 462 KRNTA-SWNSLIAGYQQL-------------------------------GQKNNALGVFR 489
           +R T    NS++AGY +L                               G+   ALG+  
Sbjct: 190 ERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVV 249

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           +M       +  T  S L ACA L +    K++H  V+R   +    V ++LI+ YAK G
Sbjct: 250 EMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCG 309

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
           +   ++ +F+ +  ++ ++W  LI G + +  +  +++LF+QM++  +  ++    ++I 
Sbjct: 310 SFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 369

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDS 669
                  + LG+++     +      ++   S +I LY + G L+ A EF+     E D 
Sbjct: 370 GCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS-LISLYAKCGDLQNA-EFVFSSMSERDI 427

Query: 670 SIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
             W +++TA    GNI   + A E    +   + +    +L  Y   G  ED LK+
Sbjct: 428 VSWTSMITAYSQIGNI---IKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKM 480


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 254/771 (32%), Positives = 392/771 (50%), Gaps = 82/771 (10%)

Query: 170 CGDFEAGKLMHS-LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
           C + ++ K +H+ LV+   +  V  +   ++ +Y   G +  AR  F+ +  +D  AWN 
Sbjct: 64  CTNLQSAKCLHARLVVSNAIQNVC-ISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNL 122

Query: 229 MISGYFQIGENDEAHRLFD-------------------KMCRE----------EIKLG-- 257
           MISGY + G + E  R F                    K CR            +K G  
Sbjct: 123 MISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTDGNKIHCLALKFGFM 182

Query: 258 --VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             V     LI  Y + G    A  +   M     T D+ +W  MISG+ Q+G   +AL L
Sbjct: 183 WDVYVAASLIHLYCRYGAVVNARILFDEMP----TRDMGSWNAMISGYCQSGNAKEALTL 238

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
              +  +    + VT+ S +SACT+      G+ IHS ++K G   ++ V N LI++Y++
Sbjct: 239 SDGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
              L+  ++VFD +  +D+ SWNS+I  Y       +A  LF +M+ S + P+ +T   L
Sbjct: 295 FGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISL 354

Query: 436 ISGYIQNGN------------------ED-----EAVDLFQRMGKNDKVK--------RN 464
            S   Q G                   ED       V ++ ++G  D  +        ++
Sbjct: 355 ASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKD 414

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSC--FYPNCVTILSVLPACAYLVASNKVKEI 522
             SWN++I+GY Q G  + A+ ++  M+        N  T +SVLPAC+   A  +  ++
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKL 474

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           HG +L+  L   + V  SL D Y K G +  + ++F  +   + + WN+LI  +  HG  
Sbjct: 475 HGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHG 534

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
             A+ LF +M   G+KP+  TF++++ A S +G+VD G+  F  +   Y I P ++HY  
Sbjct: 535 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGC 594

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           M+DLYGR+G+LE A+ FI+ MP++PD+SIW ALL+ACR+HGN+DL  +A E LF++EP  
Sbjct: 595 MVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEH 654

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYS 762
           V    L+  +YA  GK E   ++R +      R + G   +EV N V  F TG  +    
Sbjct: 655 VGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMY 714

Query: 763 DLLYSWLQNVPEN---VTARSSHSGLC--IEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
           + +Y  L  + E    V     H  +   +E++EKE I   HSE+LA+AFALI ++ A  
Sbjct: 715 EEMYRELTALHEKLKMVGYVPDHRFVLQDVEDDEKEHILMSHSERLAMAFALI-TTPAKT 773

Query: 818 TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           TIRI KN+R+C  CH   K++S +   EI + DS   HHFKNG CSCGDYW
Sbjct: 774 TIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 172/637 (27%), Positives = 281/637 (44%), Gaps = 105/637 (16%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRR-NTYINLLQAC---------IDS--------NSIH 74
           C  GR      VL S+   GA VR  +   N LQ C         ID          ++ 
Sbjct: 15  CKGGRFTR---VLQSV---GAVVREFSASANALQDCWKNGNESKEIDDVHTLFRYCTNLQ 68

Query: 75  LARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYS 133
            A+ LHA L +   I +V +  KL+++Y   G +  AR  F+ +  R++Y W+ MI  Y 
Sbjct: 69  SAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYG 128

Query: 134 RDQRWREVVELFFL-MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR 192
           R     EV+  F L M+  GL PD   FP +L+AC N  D   G  +H L +K G     
Sbjct: 129 RAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD---GNKIHCLALKFGFMWDV 185

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--- 249
            V  S++ +Y + G ++ AR  F+ M  +D  +WN+MISGY Q G   EA  L D +   
Sbjct: 186 YVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAM 245

Query: 250 -----------CRE-------------EIKLG----VVTFNILIRSYNQLGQCDVAMEMV 281
                      C E              IK G    +   N LI  Y + G      ++ 
Sbjct: 246 DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVF 305

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
            RM       D+ +W  +I  +  N +  +A+ LF+EM    + P+ +T+ S  S  + L
Sbjct: 306 DRM----YVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQL 361

Query: 342 KALAMGMEIHSLAVKMG-FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
             +     +    ++ G F +D+ +GN+++ MY+K   +++A  VF+ + +KDV SWN++
Sbjct: 362 GEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTI 421

Query: 401 IAGYCQAGYCGKAYELFIKMQE--SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           I+GY Q G+  +A E++  M+E   ++  N  TW  ++    Q G   + + L  R+ KN
Sbjct: 422 ISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 481

Query: 459 D-----------------------------KVKR-NTASWNSLIAGYQQLGQKNNALGVF 488
                                         ++ R N+  WN+LIA +   G    A+ +F
Sbjct: 482 GLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 541

Query: 489 RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV----LRRSLESSLPVMNSLIDT 544
           ++M      P+ +T +++L AC++   S  V E   C         +  SL     ++D 
Sbjct: 542 KEMLDEGVKPDHITFVTLLSACSH---SGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDL 598

Query: 545 YAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
           Y ++G +  +      M    D   W +L+    +HG
Sbjct: 599 YGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHG 635



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 152/322 (47%), Gaps = 20/322 (6%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D+ +   ++ +YAK G +D AR VF  +  +++ +W+ +I  Y+++    E +E++ +M 
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIME 442

Query: 150 QDG--LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           ++G  +  +   +  +L AC   G    G  +H  ++K G+     V  S+  +Y KCG+
Sbjct: 443 EEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGR 502

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           L  A   F  +   + V WN++I+ +   G  ++A  LF +M  E +K   +TF  L+ +
Sbjct: 503 LDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 562

Query: 268 YNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            +  G  D      + M++  GITP +  + CM+  + + G+   AL+  K M    + P
Sbjct: 563 CSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMP---LQP 619

Query: 327 NGVTITSAISAC-----TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
           +     + +SAC      DL  +A           +G+   VL    L NMY+   + E 
Sbjct: 620 DASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY--HVL----LSNMYASAGKWEG 673

Query: 382 AERVFDMIKDKDVY---SWNSM 400
            + +  +   K +     W+SM
Sbjct: 674 VDEIRSITSGKGLRKTPGWSSM 695


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 259/809 (32%), Positives = 405/809 (50%), Gaps = 106/809 (13%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM--SCVRRVRNSVLAVYVKCGKLIWARR 213
           D    P  +++     D  + + +H+  ++ G+       V N++L  Y +CG+L  A  
Sbjct: 56  DHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALE 115

Query: 214 FFESMDEK--DGVAWNSMISGYFQIGENDE-----------AHRLFD------------- 247
            F S+ +   D V++NS+IS        D             H L               
Sbjct: 116 VFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHL 175

Query: 248 -------KMCREE----IKLGVV------TFNILIRSYNQLGQCDVAMEMVKRMESLGIT 290
                  ++ RE     +K G++       FN L+  Y +LG    A  +       G T
Sbjct: 176 PAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFA-----GAT 230

Query: 291 P---DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
           P   DV TW  M+S   Q+G   +A+    +M  +GV P+GVT  SA+ AC+ L+ L +G
Sbjct: 231 PGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVG 290

Query: 348 MEIHSLAVKMGFTDDVLVGNS-----LINMYSKCEELEAAERVFDMIKD--KDVYSWNSM 400
            E+H+  +K    DD L  NS     L++MY+  E++  A +VFDM+ D  K +  WN+M
Sbjct: 291 REMHAYVIK----DDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAM 346

Query: 401 IAGYCQAGYCGKAYELFIKMQESD--VPPNVITWNVL--------------ISGYI---- 440
           I GY QAG   +A  LF +M+     VP      +VL              + GY+    
Sbjct: 347 ICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRG 406

Query: 441 QNGN---EDEAVDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFR 489
             GN   ++  +D++ R+GK D  +R        +  SWN+LI G    G   +A  + R
Sbjct: 407 MAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAR 466

Query: 490 KMQS---SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
           +MQ        PN +T++++LP CA L A  + KEIHG  +R +L++ + V ++L+D YA
Sbjct: 467 EMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYA 526

Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG-LKPNRGTFL 605
           K G +  SR +FD +  ++ ITWN LI  Y +HG    A  LFD+M + G  +PN  TF+
Sbjct: 527 KCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFM 586

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
           + + A S +GMVD G ++F ++   + + P  +  + ++D+ GR+G+L+EA   +  M  
Sbjct: 587 AALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMET 646

Query: 666 -EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
            E   S W  +L ACR+H N+ L  +A ERL +LEP +     L+  IY+  G+   A +
Sbjct: 647 GEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAE 706

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS-----WLQNVPENVTAR 779
           VR   R        G  WIEV   ++ F+ G  +   S+ +++     W + V    T  
Sbjct: 707 VRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPD 766

Query: 780 SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVS 839
           +S     +++ +K  +   HSEKLA+AF L+ ++    TIR+ KN+R+C  CHE AK++S
Sbjct: 767 TSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGA-TIRVAKNLRVCNDCHEAAKFLS 825

Query: 840 MMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            M   EI L D +  HHF+NGQCSCGDYW
Sbjct: 826 KMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 218/456 (47%), Gaps = 56/456 (12%)

Query: 59  TYINLLQAC----IDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAR 111
           T +++L+A       + ++ L R+ HAF     L+     F    LLS+YA+ G + DA+
Sbjct: 164 TLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQ 223

Query: 112 EVFEDMR--ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
            +F        ++ TW+ M+    +   + E V+  + MV  G+ PD   F   L AC  
Sbjct: 224 RLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSR 283

Query: 170 CGDFEAGKLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE--KDGVAW 226
               + G+ MH+ VIK   ++    V ++++ +Y    ++  AR+ F+ + +  K    W
Sbjct: 284 LELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMW 343

Query: 227 NSMISGYFQIGENDEAHRLFDKM--------------------CREE------------I 254
           N+MI GY Q G ++EA RLF +M                     R E            +
Sbjct: 344 NAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVV 403

Query: 255 KLGVV----TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTS 310
           K G+       N L+  Y +LG+ DVA    +R+ ++   PDV +W  +I+G    G  +
Sbjct: 404 KRGMAGNRFVQNALMDMYARLGKTDVA----RRIFAMVDLPDVVSWNTLITGCVVQGHVA 459

Query: 311 QALDLFKEMSFV---GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
            A  L +EM  +   GV+PN +T+ + +  C  L A A G EIH  AV+     DV VG+
Sbjct: 460 DAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGS 519

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES-DVP 426
           +L++MY+KC  L  +  VFD +  ++  +WN +I  Y   G  G+A  LF +M  S +  
Sbjct: 520 ALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEAR 579

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
           PN +T+   ++    +G  D  + LF  M ++  V+
Sbjct: 580 PNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVE 615



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 150/589 (25%), Positives = 249/589 (42%), Gaps = 85/589 (14%)

Query: 76  ARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE--RNLYTWSAMIG 130
           AR +HA      L+      V   LL+ YA+CG L  A EVF  + +   +  +++++I 
Sbjct: 76  ARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLIS 135

Query: 131 AYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA----GKLMHSLVIKL 186
           A    +RW   +     M+  G     F    +L+A  +     A    G+  H+  +K 
Sbjct: 136 ALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKN 195

Query: 187 GM--SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG--VAWNSMISGYFQIGENDEA 242
           G+     R   N++L++Y + G +  A+R F       G  V WN+M+S   Q G  DEA
Sbjct: 196 GLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEA 255

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME----------------------- 279
            +    M    ++   VTF   + + ++L   DV  E                       
Sbjct: 256 VQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVD 315

Query: 280 MVKRMESLGITPDVF-----------TWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPN 327
           M    E +G    VF            W  MI G+AQ G   +AL LF  M +  G +P 
Sbjct: 316 MYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPC 375

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             T+ S + AC   +A A    +H   VK G   +  V N+L++MY++  + + A R+F 
Sbjct: 376 ETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFA 435

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ---ESDVPPNVITWNVLISG-----Y 439
           M+   DV SWN++I G    G+   A++L  +MQ   E  V PN IT   L+ G      
Sbjct: 436 MVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAA 495

Query: 440 IQNGNE-----------------DEAVDLFQRMG-------KNDKV-KRNTASWNSLIAG 474
              G E                    VD++ + G         D++ +RNT +WN LI  
Sbjct: 496 PARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMA 555

Query: 475 YQQLGQKNNALGVFRKMQSSC-FYPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLE 532
           Y   G    A  +F +M +S    PN VT ++ L AC++  +    ++  H       +E
Sbjct: 556 YGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVE 615

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS--KDIITWNSLICGYVLH 579
            +  ++  ++D   ++G +  +  +   M +  + +  W++++    LH
Sbjct: 616 PTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLH 664



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 219/490 (44%), Gaps = 52/490 (10%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +  L  +G  +EA+  L  +   G +    T+ + L AC     + + R++HA++  
Sbjct: 240 NTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIK 299

Query: 86  VTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRE--RNLYTWSAMIGAYSRDQRWREV 141
             E+  + FV + L+ +YA    +  AR+VF+ + +  + L  W+AMI  Y++     E 
Sbjct: 300 DDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEA 359

Query: 142 VELFFLM-VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
           + LF  M  + G  P +     +L AC     F   + +H  V+K GM+  R V+N+++ 
Sbjct: 360 LRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMD 419

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y + GK   ARR F  +D  D V+WN++I+G    G   +A +L  +M  ++++ G V 
Sbjct: 420 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREM--QQLEEGGVV 477

Query: 261 FNIL--------------------IRSY--NQLGQCDVA-----MEMVKRMESLGITPDV 293
            N +                    I  Y        DVA     ++M  +   L ++  V
Sbjct: 478 PNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAV 537

Query: 294 F---------TWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKA 343
           F         TW  +I  +  +G   +A  LF  M+  G   PN VT  +A++AC+    
Sbjct: 538 FDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGM 597

Query: 344 LAMGMEI-HSLAVKMGF--TDDVLVGNSLINMYSKCEELEAAERVFDMIK--DKDVYSWN 398
           +  G+++ H++    G   T D+L    ++++  +   L+ A  +   ++  ++ V +W+
Sbjct: 598 VDRGLQLFHAMERDHGVEPTPDILA--CVVDILGRAGRLDEAYAMVTSMETGEQQVSAWS 655

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           +M+ G C+        E+  +      P     + +L + Y   G    A ++  RM + 
Sbjct: 656 TML-GACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRR 714

Query: 459 DKVKRNTASW 468
              K    SW
Sbjct: 715 GVAKEPGCSW 724


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 257/850 (30%), Positives = 412/850 (48%), Gaps = 119/850 (14%)

Query: 54  KVRRNTYINLLQACI--DSNSIHLA-RKLHAFL---NLVTEIDVF-------VKTKLLSV 100
           +  R  +  LL A +  D +  HL  R LH +    +L T   +F         T L+S 
Sbjct: 39  RTLRCLHARLLTAALLHDPSHPHLTLRLLHLYTLSPDLATPAVLFRADPGPVAATSLVSA 98

Query: 101 YAKCGCLDDAREVFEDMR--ERNLYTWSAMIGAYSRDQRWREVVELF--FLMVQDGLFPD 156
           YA  G L D+   F+ +    R+    +AMI A++R       V +F   L   D L PD
Sbjct: 99  YAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPD 158

Query: 157 DFLFPKILQACGNCGDFEAGKL--MHSLVIKLGMSCVRRVRNSVLAVYVKC---GKLIWA 211
           D+ F  +L A G   D        +H  V KLG   V  V N+++A+Y+KC   G    A
Sbjct: 159 DYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDA 218

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R+  + M EKD + W +++ G+ + G+   A   F     EEI                 
Sbjct: 219 RKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAF-----EEID---------------- 257

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           G+ DV                   W  MISG+ Q+G  ++A +LF+ M    + P+  T 
Sbjct: 258 GEFDV------------------VWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTF 299

Query: 332 TSAISACTDLKALAMGMEIHSLAVKM--GFTDD--VLVGNSLINMYSKCEELEAAERVFD 387
           TS +SAC +      G  +H   +++   F  +  + V N+L+ +YSK  ++  A ++FD
Sbjct: 300 TSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFD 359

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
            +  K                                   +V++WN ++SGYI++G  D 
Sbjct: 360 SMTLK-----------------------------------DVVSWNTILSGYIESGCLDN 384

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           A  +F+ M    ++     SW  +++GY   G   +AL +F +M+S    P   T    +
Sbjct: 385 AARIFKEMPYKSEL-----SWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAV 439

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
            AC  L A    K++H  +++   E+S    N+L+  YA+ G +  +R +F  M + D +
Sbjct: 440 AACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSV 499

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
           +WN++I     HG    AL+LFDQM + G+ P+R +FL+I+ A + AG+VD G + F S+
Sbjct: 500 SWNAMISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESM 559

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
              + I P  +HY+ +IDL GR+G++ EA + I+ MP EP  +IWEA+L+ CRI+G+++L
Sbjct: 560 ERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMEL 619

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
              A ++LF + P       L+   Y+  G+  DA +VRKL R+   +   G  WIEV N
Sbjct: 620 GAYAADQLFKMVPEHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGN 679

Query: 748 LVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGI 798
            V+ F+ G      +  +Y +L    E V A+    G           +   EKE +   
Sbjct: 680 KVHVFLVGDTKHPDAHEVYRFL----EMVGAKMRKLGYVPDTKFALQDMAPHEKEYVLFA 735

Query: 799 HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
           HSE+LA++F L+    A  T+ ++KN+++C  CH    ++S     EI + D +  HHFK
Sbjct: 736 HSERLAVSFGLL-KLPAGATVTVLKNLKICGDCHTAMMFMSRAVGREIVVRDVRRFHHFK 794

Query: 859 NGQCSCGDYW 868
           +G+CSCG+YW
Sbjct: 795 DGECSCGNYW 804



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 169/384 (44%), Gaps = 21/384 (5%)

Query: 14  SLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSI 73
           SLL+  +N  F      FL G     + I +      + A    N  + L      S  I
Sbjct: 301 SLLSACANAGF------FLHGKSVHGQFIRLQPDFVPEAALPVNNALVTLYS---KSGKI 351

Query: 74  HLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYS 133
            +A K+    + +T  DV     +LS Y + GCLD+A  +F++M  ++  +W  M+  Y 
Sbjct: 352 AVATKI---FDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYV 408

Query: 134 RDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR 193
                 + ++LF  M  + + P D+ +   + ACG  G  + GK +H+ +++ G      
Sbjct: 409 HGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNS 468

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
             N++L +Y +CG +  AR  F  M   D V+WN+MIS   Q G   EA  LFD+M  + 
Sbjct: 469 AGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQG 528

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQA 312
           I    ++F  ++ + N  G  D   +  + ME   GI+P    +  +I    + GR  +A
Sbjct: 529 IYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEA 588

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI-- 370
            DL K M F    P      + +S C     + +G        KM    D   G  ++  
Sbjct: 589 RDLIKTMPF---EPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHD---GTYILLS 642

Query: 371 NMYSKCEELEAAERVFDMIKDKDV 394
           N YS       A RV  +++D+ V
Sbjct: 643 NTYSAAGRWVDAARVRKLMRDRGV 666


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 273/919 (29%), Positives = 449/919 (48%), Gaps = 116/919 (12%)

Query: 48  IATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV----FVKTKLLSVYAK 103
           IA QG     +TY  LLQAC    ++   ++LHA + L   ID+    F+ + L+ ++AK
Sbjct: 35  IADQG-HCAPSTYGCLLQACGRLRALKQGQRLHAHI-LSRRIDLHNHSFLASDLIVMHAK 92

Query: 104 CGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKI 163
           CG L +A E   D R  ++Y+ +AMI A+    R  + +ELF  M    + P+      +
Sbjct: 93  CGNLAEA-EALAD-RFASVYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIAL 147

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM---DE 220
           + AC   G+  AG+ +HS +          + N+++++Y KCG LI A++ F+ +    +
Sbjct: 148 VNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASK 207

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKMCREE----------------IKLGVVTF--- 261
           +D V WN+MIS + + G   EA +LF  M R+                 ++ G+++    
Sbjct: 208 RDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDV 267

Query: 262 -------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
                                L+ SY +LG  D A E+  R      +  + T + MIS 
Sbjct: 268 RAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISA 327

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK-------ALAMGMEIHSLAV 355
             QNG   ++L LF  M+  G  P+GVT+ S ++AC+ L+        L   ME+ S   
Sbjct: 328 CWQNGWPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSA-- 385

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
               T D ++G +L+  Y++  +L  A   FD I+  DV SWN+M A Y Q     +A  
Sbjct: 386 ----TRDNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALV 441

Query: 416 LFIKMQESDVPPNVITW--------------------------------------NVLIS 437
           LF +M    V P+V T+                                      N  ++
Sbjct: 442 LFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLN 501

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
            Y + G+  +A  +F+R+      +R+  +WNS++A Y   G    A  +F+ M++    
Sbjct: 502 MYAKCGSLADARAVFERI---SPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLV 558

Query: 498 -PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            PN VT ++VL A     +  + +EIH  V+    ES   + N+L++ YAK G++  ++ 
Sbjct: 559 KPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQA 618

Query: 557 IFDGMSS--KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           IFD  SS  +D+I W SLI GY  +G    AL LF  M+  G++PN  TF+S + A +  
Sbjct: 619 IFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHG 678

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G ++ G ++   +T  + I+P  +H+S ++DL GR G+L+EA + +E    + D   W A
Sbjct: 679 GKLEQGCELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMA 737

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           LL AC+    ++      ER+  L+P       ++  +YA  G+  +A  +RK   +   
Sbjct: 738 LLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGI 797

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS--SHSGLC---IEE 789
           R   G   +EV   +++F  G  S   S+ +Y  L+ +  ++ A    + +GL    + +
Sbjct: 798 RADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVLHDVSQ 857

Query: 790 EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
           E KE +   HSEKLA+AF L+ S+ +   +R++KN+R+C  CH   K +S +   +I + 
Sbjct: 858 EHKERLLMRHSEKLAIAFGLM-STPSGSPLRVIKNLRVCSDCHTATKLISKVTGRDILMR 916

Query: 850 DSKCLHHFKNGQCSCGDYW 868
           DS   HHF +G CSCGDYW
Sbjct: 917 DSSRYHHFTSGTCSCGDYW 935



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 130/473 (27%), Positives = 207/473 (43%), Gaps = 63/473 (13%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI----- 89
           NG   E++ +  ++  +G K    T +++L AC   + + +       L    E+     
Sbjct: 331 NGWPQESLRLFFAMNLEGTKPSGVTLVSVLNAC---SMLQVGSATAFVLEQAMEVVSATR 387

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D  + T LL+ YA+   L  AR  F+ ++  ++ +W+AM  AY +  R RE + LF  M+
Sbjct: 388 DNVLGTTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERML 447

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEA---GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            +G+ P    F   L AC       A   GK + SL+ + G+     V N+ L +Y KCG
Sbjct: 448 LEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCG 507

Query: 207 KLIWARRFFE--SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-IKLGVVTF-- 261
            L  AR  FE  S   +D + WNSM++ Y   G   EA  LF  M  E+ +K   VTF  
Sbjct: 508 SLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVA 567

Query: 262 ---------------------------------NILIRSYNQLGQCDVAMEMVKRMESLG 288
                                            N L+  Y + G  D A  +  +  S  
Sbjct: 568 VLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSS-- 625

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
              DV  WT +I+G+AQ G+  +AL LF  M   GV PN VT  SA++AC     L  G 
Sbjct: 626 NQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGC 685

Query: 349 EIHSLAVKMGFTDD--VLVGNS----LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           E+ S     G T D  +L  +     ++++  +C  L+ AE++ +     DV +W +++ 
Sbjct: 686 ELLS-----GMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALLD 740

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
               +    +      ++ + D P    ++ VL S Y   G  +EA  + + M
Sbjct: 741 ACKNSKELERGERCAERIMQLD-PEVASSYIVLASMYAAAGRWNEAATIRKTM 792


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 234/709 (33%), Positives = 365/709 (51%), Gaps = 59/709 (8%)

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
           RNS++  Y + G++  AR  F+ M +K+ ++WNS+++GYFQ     EA  +FDKM     
Sbjct: 101 RNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER-- 158

Query: 255 KLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
               +++N L+  Y   G  + A E+  RM       +V +WT M+ G+ + G  S+A  
Sbjct: 159 --NTISWNGLVSGYINNGMINEAREVFDRMPE----RNVVSWTAMVRGYVKEGMISEAET 212

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
           LF +M    V+   V +   +      +A  +          M    DV+   ++I  Y 
Sbjct: 213 LFWQMPEKNVVSWTVMLGGLLQEGRIDEACRL--------FDMMPEKDVVTRTNMIGGYC 264

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           +   L  A  +FD +  ++V SW +MI GY Q      A +LF  M E     N ++W  
Sbjct: 265 QVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTA 320

Query: 435 LISGYIQNGNEDEAVDLFQRM---------------GKNDKV-----------KRNTASW 468
           ++ GY   G  DEA +LF  M               G+N +V           +++  +W
Sbjct: 321 MLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTW 380

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           +++I  Y++ G + +AL +FR MQ     PN  +++SVL  CA L   +  +EIH  ++R
Sbjct: 381 SAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVR 440

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
              +  + V + L+  Y K GN+  ++ +FD  + KD++ WNS+I GY  HG    AL +
Sbjct: 441 SQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRV 500

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F  M   G+ P+  TF+ ++ A S  G V  G ++F S+   YQ+   IEHY+ M+DL G
Sbjct: 501 FHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLG 560

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+GKL EAM+ IE MP+E D+ IW ALL ACR H  +DLA +A ++L  LEP +     L
Sbjct: 561 RAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFIL 620

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD----- 763
           +  IYA  G+ +D  ++R+  R+       G  WI V+  V+ F TGG S  + +     
Sbjct: 621 LSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKF-TGGDSSGHPEHSEIN 679

Query: 764 LLYSWLQNVPENVTARSSHSGLC--IEEEEKEEISGIHSEKLALAFALIGSSQAP--HTI 819
            +  WL  +          S +   ++EEEK +    HSEKLA+A+ L+   + P    I
Sbjct: 680 RILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLL---KIPIGMPI 736

Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           R++KN+R+C  CH   K ++ +   EI L D+   HHFK+G CSC DYW
Sbjct: 737 RVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 228/460 (49%), Gaps = 29/460 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNT--YINLLQACIDSNSIHLARKLHAFLNLVTEIDVF 92
           N R  EA  + D ++       RNT  +  L+   I++  I+ AR++    + + E +V 
Sbjct: 142 NKRPQEAQNMFDKMSE------RNTISWNGLVSGYINNGMINEAREV---FDRMPERNVV 192

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
             T ++  Y K G + +A  +F  M E+N+ +W+ M+G   ++ R  E   LF +M    
Sbjct: 193 SWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMM---- 248

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR-NSVLAVYVKCGKLIWA 211
             P+  +  +     G C   + G+L+ + ++   M     V   +++  YV+  ++  A
Sbjct: 249 --PEKDVVTRTNMIGGYC---QVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIA 303

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R+ FE M EK+ V+W +M+ GY   G  DEA  LF+ M    IK  VV  N +I  + Q 
Sbjct: 304 RKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAM---PIK-SVVACNAMILCFGQN 359

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           G+   A ++  +M       D  TW+ MI  + + G    AL+LF+ M   G+ PN  ++
Sbjct: 360 GEVPKARQVFDQMRE----KDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSL 415

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
            S +S C  L  L  G EIH+  V+  F  DV V + L++MY KC  L  A++VFD    
Sbjct: 416 ISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAV 475

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
           KDV  WNS+I GY Q G   +A  +F  M  S + P+ +T+  ++S     GN  + +++
Sbjct: 476 KDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEI 535

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           F  M    +V++    +  ++    + G+ N A+ +  KM
Sbjct: 536 FNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKM 575



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 155/558 (27%), Positives = 252/558 (45%), Gaps = 79/558 (14%)

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +  +  L++ Y++ G ++ AR VF++MR++N+ +W++++  Y +++R +E   +F  M +
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
                 + L    +    N    EA ++   +  +  +S    VR      YVK G +  
Sbjct: 158 RNTISWNGLVSGYIN---NGMINEAREVFDRMPERNVVSWTAMVRG-----YVKEGMISE 209

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A   F  M EK+ V+W  M+ G  Q G  DEA RLFD M  ++    VVT   +I  Y Q
Sbjct: 210 AETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKD----VVTRTNMIGGYCQ 265

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP--NG 328
           +G+   A  +   M       +V +WT MI+G+ QN +   A  LF+      VMP  N 
Sbjct: 266 VGRLVEARMLFDEMPR----RNVVSWTTMITGYVQNQQVDIARKLFE------VMPEKNE 315

Query: 329 VTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
           V+ T+ +   T+   L    E+ +++ +K      V+  N++I  + +  E+  A +VFD
Sbjct: 316 VSWTAMLKGYTNCGRLDEASELFNAMPIK-----SVVACNAMILCFGQNGEVPKARQVFD 370

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN------------------- 428
            +++KD  +W++MI  Y + G    A ELF  MQ   + PN                   
Sbjct: 371 QMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDH 430

Query: 429 ----------------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                           V   +VL+S YI+ GN  +A  +F R    D V      WNS+I
Sbjct: 431 GREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVV-----MWNSII 485

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV-LRRSL 531
            GY Q G    AL VF  M  S   P+ VT + VL AC+Y     K  EI   +  +  +
Sbjct: 486 TGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQV 545

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFD 590
           E  +     ++D   ++G +  +  + + M    D I W +L+         H  LDL +
Sbjct: 546 EQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRT----HMKLDLAE 601

Query: 591 --QMKSFGLKP-NRGTFL 605
               K   L+P N G F+
Sbjct: 602 VAAKKLLVLEPKNAGPFI 619



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 175/338 (51%), Gaps = 30/338 (8%)

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           ++  NSLI  YS+  ++E A  VFD ++DK++ SWNS++AGY Q     +A  +F KM E
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
                N I+WN L+SGYI NG  +EA ++F RM      +RN  SW +++ GY + G  +
Sbjct: 158 R----NTISWNGLVSGYINNGMINEAREVFDRMP-----ERNVVSWTAMVRGYVKEGMIS 208

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL-ESSLPVMNSL 541
            A  +F +M       N V+   +L     L+   ++ E   C L   + E  +    ++
Sbjct: 209 EAETLFWQMPEK----NVVSWTVMLGG---LLQEGRIDE--ACRLFDMMPEKDVVTRTNM 259

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
           I  Y + G +V +R +FD M  +++++W ++I GYV +     A  LF+ M     + N 
Sbjct: 260 IGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNE 315

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
            ++ +++  ++  G +D   ++F ++      I  +   +AMI  +G++G++ +A +  +
Sbjct: 316 VSWTAMLKGYTNCGRLDEASELFNAMP-----IKSVVACNAMILCFGQNGEVPKARQVFD 370

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
            M  E D   W A++      G ++L  L + R+   E
Sbjct: 371 QMR-EKDEGTWSAMIKVYERKG-LELDALELFRMMQRE 406



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 193/425 (45%), Gaps = 52/425 (12%)

Query: 82  FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
             +++ E DV  +T ++  Y + G L +AR +F++M  RN+ +W+ MI  Y ++Q+    
Sbjct: 244 LFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIA 303

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLA 200
            +LF +M +     ++  +  +L+   NCG   EA +L +++ IK  ++C     N+++ 
Sbjct: 304 RKLFEVMPE----KNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVAC-----NAMIL 354

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK----- 255
            + + G++  AR+ F+ M EKD   W++MI  Y + G   +A  LF  M RE I+     
Sbjct: 355 CFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPS 414

Query: 256 ------------------------------LGVVTFNILIRSYNQLGQCDVAMEMVKRME 285
                                         L V   ++L+  Y + G    A ++  R  
Sbjct: 415 LISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRF- 473

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
                 DV  W  +I+G+AQ+G   +AL +F +M F G+MP+ VT    +SAC+    + 
Sbjct: 474 ---AVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVK 530

Query: 346 MGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAG 403
            G+EI +S+  K      +     ++++  +  +L EA + +  M  + D   W +++ G
Sbjct: 531 KGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL-G 589

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
            C+        E+  K      P N   + +L + Y   G  D+  +L + M      K 
Sbjct: 590 ACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKY 649

Query: 464 NTASW 468
              SW
Sbjct: 650 PGCSW 654



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 98/196 (50%), Gaps = 3/196 (1%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL 98
           +A+ +   +  +G +    + I++L  C    ++   R++HA  +    ++DV+V + LL
Sbjct: 395 DALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLL 454

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
           S+Y KCG L  A++VF+    +++  W+++I  Y++     E + +F  M   G+ PDD 
Sbjct: 455 SMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDV 514

Query: 159 LFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
            F  +L AC   G+ + G ++ +S+  K  +         ++ +  + GKL  A    E 
Sbjct: 515 TFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEK 574

Query: 218 MD-EKDGVAWNSMISG 232
           M  E D + W +++  
Sbjct: 575 MPMEADAIIWGALLGA 590


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 215/616 (34%), Positives = 349/616 (56%), Gaps = 42/616 (6%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           PD   +  MI GF       +A+ LFKEM    V P+  T    +  C+ L+AL+ G +I
Sbjct: 87  PDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQI 146

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H+L +K GF     V N+LI+MY+ C E+E A RVFD + +++V +WNSM AGY ++G  
Sbjct: 147 HALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNW 206

Query: 411 GKAYELFIKMQESDVPPNVITW-NVL--------------ISGYIQ----NGNED---EA 448
            +  +LF +M E D+  + +T  +VL              I+ Y++     GN       
Sbjct: 207 EEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSL 266

Query: 449 VDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           VD++ + G+ D  +R        +  +W+++I+GY Q  +   AL +F +MQ +   PN 
Sbjct: 267 VDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNE 326

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           +T++S+L +CA L A    K +H  + ++ ++ ++ +  +L+D YAK G++  S  +F  
Sbjct: 327 ITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGK 386

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           M  K++++W  LI G   +G    AL+ F  M    ++PN  TF+ ++ A S AG+VD G
Sbjct: 387 MPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEG 446

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
           + +F S++  + I P IEHY  M+D+ GR+G +EEA +FI++MPI+P++ IW  LL +C+
Sbjct: 447 RDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCK 506

Query: 681 IHGNIDLAVLAIERLFDLEP---GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNS 737
           +H N+++   ++++L  LEP   GD +   L+  IYA  G+ EDALKVR   +E   + +
Sbjct: 507 VHKNVEIGEESLKQLIILEPTHSGDYI---LLSNIYASVGRWEDALKVRGEMKEKGIKKT 563

Query: 738 FGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA-----RSSHSGLCIEEEEK 792
            G   IE+  +++ F       S S+ +Y+ ++++ + + +      ++ + L  EE++K
Sbjct: 564 PGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVPNTAEARLDAEEDDK 623

Query: 793 EEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
           E     HSEKLA+AF LI S     TIRI KN+R+C  CH   K VS + + EI + D  
Sbjct: 624 ESSVSHHSEKLAIAFGLIKSPPGT-TIRITKNLRVCTDCHNATKLVSKVFNREIVVRDRT 682

Query: 853 CLHHFKNGQCSCGDYW 868
             HHFK G CSC DYW
Sbjct: 683 RFHHFKEGSCSCNDYW 698



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 145/534 (27%), Positives = 237/534 (44%), Gaps = 74/534 (13%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           +D A  +F  + E +   ++ MI  ++  Q   E + LF  M ++ + PD+F FP IL+ 
Sbjct: 74  MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKV 133

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C        G+ +H+L++K G      V+N+++ +Y  CG++  ARR F+ M E++   W
Sbjct: 134 CSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTW 193

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------------- 261
           NSM +GY + G  +E  +LF +M   +I+   VT                          
Sbjct: 194 NSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEE 253

Query: 262 ----------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQ 311
                       L+  Y + GQ D A  +  +M+      DV  W+ MISG++Q  R  +
Sbjct: 254 KGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRR----DVVAWSAMISGYSQASRCRE 309

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           ALDLF EM    + PN +T+ S +S+C  L AL  G  +H    K      V +G +L++
Sbjct: 310 ALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMD 369

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
            Y+KC  +E++  VF  +  K+V SW  +I G    G   KA E F  M E +V PN +T
Sbjct: 370 FYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVT 429

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           +  ++S     G  DE  DLF  M ++  ++     +  ++    + G    A    + M
Sbjct: 430 FIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNM 489

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
                 PN V   ++L +C          ++H     +++E     +  LI         
Sbjct: 490 P---IQPNAVIWRTLLASC----------KVH-----KNVEIGEESLKQLI--------- 522

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
                I +   S D I  +++   Y   G W  AL +  +MK  G+K   G  L
Sbjct: 523 -----ILEPTHSGDYILLSNI---YASVGRWEDALKVRGEMKEKGIKKTPGCSL 568



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 188/405 (46%), Gaps = 48/405 (11%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKL 97
           +EAI +   +     +    T+  +L+ C    ++    ++HA  +        FVK  L
Sbjct: 106 HEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTL 165

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           + +YA CG ++ AR VF++M ERN+ TW++M   Y++   W EVV+LF  M++  +  D+
Sbjct: 166 IHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDE 225

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
                +L ACG   D E G+ ++  V + G+     +  S++ +Y KCG++  ARR F+ 
Sbjct: 226 VTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQ 285

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI----------------------- 254
           MD +D VAW++MISGY Q     EA  LF +M +  I                       
Sbjct: 286 MDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETG 345

Query: 255 ------------KLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
                       KL V     L+  Y + G  + ++E+  +M       +V +WT +I G
Sbjct: 346 KWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMP----VKNVLSWTVLIQG 401

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH-SLAVKMGFTD 361
            A NG+  +AL+ F  M    V PN VT    +SAC+    +  G ++  S++   G   
Sbjct: 402 LASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEP 461

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS----WNSMIA 402
            +     ++++  +   +E A   F  IK+  +      W +++A
Sbjct: 462 RIEHYGCMVDILGRAGLIEEA---FQFIKNMPIQPNAVIWRTLLA 503



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/393 (22%), Positives = 175/393 (44%), Gaps = 72/393 (18%)

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           D AV +F+++ + D     + ++N +I G+      + A+ +F++M  +   P+  T   
Sbjct: 75  DYAVSIFRQIDEPD-----SPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPC 129

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           +L  C+ L A ++ ++IH  +++    S   V N+LI  YA  G +  +R +FD MS ++
Sbjct: 130 ILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERN 189

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK---- 621
           + TWNS+  GY   G W   + LF +M    ++ +  T +S++ A      ++LG+    
Sbjct: 190 VRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINR 249

Query: 622 -----------KVFCSITECYQIIPMIE---------------HYSAMIDLYGRSGKLEE 655
                       +  S+ + Y     ++                +SAMI  Y ++ +  E
Sbjct: 250 YVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCRE 309

Query: 656 AMEFIEDMP---IEPDSSIWEALLTACRIHGNID----LAVLAIERLFDLEPGDVLIQRL 708
           A++   +M    I+P+     ++L++C + G ++    +     ++   L    V +   
Sbjct: 310 ALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKL---TVTLGTA 366

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN------LVYTFVTGGWSESYS 762
           ++  YA CG  E +++V            FG+  + VKN      L+    + G  +   
Sbjct: 367 LMDFYAKCGSVESSIEV------------FGK--MPVKNVLSWTVLIQGLASNGQGKKAL 412

Query: 763 DLLYSWLQ-NV-PENVT-----ARSSHSGLCIE 788
           +  Y  L+ NV P +VT     +  SH+GL  E
Sbjct: 413 EYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDE 445


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 234/709 (33%), Positives = 365/709 (51%), Gaps = 59/709 (8%)

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
           RNS++  Y + G++  AR  F+ M +K+ ++WNS+++GYFQ     EA  +FDKM     
Sbjct: 101 RNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSER-- 158

Query: 255 KLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
               +++N L+  Y   G  + A E+  RM       +V +WT M+ G+ + G  S+A  
Sbjct: 159 --NTISWNGLVSGYINNGMINEAREVFDRMPE----RNVVSWTAMVRGYVKEGMISEAET 212

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
           LF +M    V+   V +   +      +A  +          M    DV+   ++I  Y 
Sbjct: 213 LFWQMPEKNVVSWTVMLGGLLQEGRIDEACRL--------FDMMPEKDVVTRTNMIGGYC 264

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           +   L  A  +FD +  ++V SW +MI GY Q      A +LF  M E     N ++W  
Sbjct: 265 QVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEK----NEVSWTA 320

Query: 435 LISGYIQNGNEDEAVDLFQRM---------------GKNDKV-----------KRNTASW 468
           ++ GY   G  DEA +LF  M               G+N +V           +++  +W
Sbjct: 321 MLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTW 380

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           +++I  Y++ G + +AL +FR MQ     PN  +++SVL  CA L   +  +EIH  ++R
Sbjct: 381 SAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVR 440

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
              +  + V + L+  Y K GN+  ++ +FD  + KD++ WNS+I GY  HG    AL +
Sbjct: 441 SQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRV 500

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F  M   G+ P+  TF+ ++ A S  G V  G ++F S+   YQ+   IEHY+ M+DL G
Sbjct: 501 FHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLG 560

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+GKL EAM+ IE MP+E D+ IW ALL ACR H  +DLA +A ++L  LEP +     L
Sbjct: 561 RAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFIL 620

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD----- 763
           +  IYA  G+ +D  ++R+  R+       G  WI V+  V+ F TGG S  + +     
Sbjct: 621 LSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKF-TGGDSSGHPEHSEIN 679

Query: 764 LLYSWLQNVPENVTARSSHSGLC--IEEEEKEEISGIHSEKLALAFALIGSSQAP--HTI 819
            +  WL  +          S +   ++EEEK +    HSEKLA+A+ L+   + P    I
Sbjct: 680 RILEWLSGLLREAGYYPDQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLL---KIPIGMPI 736

Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           R++KN+R+C  CH   K ++ +   EI L D+   HHFK+G CSC DYW
Sbjct: 737 RVMKNLRVCGDCHAAIKLIAKVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 228/460 (49%), Gaps = 29/460 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNT--YINLLQACIDSNSIHLARKLHAFLNLVTEIDVF 92
           N R  EA  + D ++       RNT  +  L+   I++  I+ AR++    + + E +V 
Sbjct: 142 NKRPQEAQNMFDKMSE------RNTISWNGLVSGYINNGMINEAREV---FDRMPERNVV 192

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
             T ++  Y K G + +A  +F  M E+N+ +W+ M+G   ++ R  E   LF +M    
Sbjct: 193 SWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMM---- 248

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR-NSVLAVYVKCGKLIWA 211
             P+  +  +     G C   + G+L+ + ++   M     V   +++  YV+  ++  A
Sbjct: 249 --PEKDVVTRTNMIGGYC---QVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIA 303

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R+ FE M EK+ V+W +M+ GY   G  DEA  LF+ M    IK  VV  N +I  + Q 
Sbjct: 304 RKLFEVMPEKNEVSWTAMLKGYTNCGRLDEASELFNAM---PIK-SVVACNAMILCFGQN 359

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           G+   A ++  +M       D  TW+ MI  + + G    AL+LF+ M   G+ PN  ++
Sbjct: 360 GEVPKARQVFDQMRE----KDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSL 415

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
            S +S C  L  L  G EIH+  V+  F  DV V + L++MY KC  L  A++VFD    
Sbjct: 416 ISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAV 475

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
           KDV  WNS+I GY Q G   +A  +F  M  S + P+ +T+  ++S     GN  + +++
Sbjct: 476 KDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEI 535

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           F  M    +V++    +  ++    + G+ N A+ +  KM
Sbjct: 536 FNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKM 575



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 155/558 (27%), Positives = 252/558 (45%), Gaps = 79/558 (14%)

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +  +  L++ Y++ G ++ AR VF++MR++N+ +W++++  Y +++R +E   +F  M +
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
                 + L    +    N    EA ++   +  +  +S    VR      YVK G +  
Sbjct: 158 RNTISWNGLVSGYIN---NGMINEAREVFDRMPERNVVSWTAMVRG-----YVKEGMISE 209

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A   F  M EK+ V+W  M+ G  Q G  DEA RLFD M  ++    VVT   +I  Y Q
Sbjct: 210 AETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKD----VVTRTNMIGGYCQ 265

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP--NG 328
           +G+   A  +   M       +V +WT MI+G+ QN +   A  LF+      VMP  N 
Sbjct: 266 VGRLVEARMLFDEMPR----RNVVSWTTMITGYVQNQQVDIARKLFE------VMPEKNE 315

Query: 329 VTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
           V+ T+ +   T+   L    E+ +++ +K      V+  N++I  + +  E+  A +VFD
Sbjct: 316 VSWTAMLKGYTNCGRLDEASELFNAMPIK-----SVVACNAMILCFGQNGEVPKARQVFD 370

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN------------------- 428
            +++KD  +W++MI  Y + G    A ELF  MQ   + PN                   
Sbjct: 371 QMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDH 430

Query: 429 ----------------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                           V   +VL+S YI+ GN  +A  +F R    D V      WNS+I
Sbjct: 431 GREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVV-----MWNSII 485

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV-LRRSL 531
            GY Q G    AL VF  M  S   P+ VT + VL AC+Y     K  EI   +  +  +
Sbjct: 486 TGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQV 545

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFD 590
           E  +     ++D   ++G +  +  + + M    D I W +L+         H  LDL +
Sbjct: 546 EQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRT----HMKLDLAE 601

Query: 591 --QMKSFGLKP-NRGTFL 605
               K   L+P N G F+
Sbjct: 602 VAAKKLLVLEPKNAGPFI 619



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 175/338 (51%), Gaps = 30/338 (8%)

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           ++  NSLI  YS+  ++E A  VFD ++DK++ SWNS++AGY Q     +A  +F KM E
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSE 157

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
                N I+WN L+SGYI NG  +EA ++F RM      +RN  SW +++ GY + G  +
Sbjct: 158 R----NTISWNGLVSGYINNGMINEAREVFDRMP-----ERNVVSWTAMVRGYVKEGMIS 208

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL-ESSLPVMNSL 541
            A  +F +M       N V+   +L     L+   ++ E   C L   + E  +    ++
Sbjct: 209 EAETLFWQMPEK----NVVSWTVMLGG---LLQEGRIDE--ACRLFDMMPEKDVVTRTNM 259

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
           I  Y + G +V +R +FD M  +++++W ++I GYV +     A  LF+ M     + N 
Sbjct: 260 IGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EKNE 315

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
            ++ +++  ++  G +D   ++F ++      I  +   +AMI  +G++G++ +A +  +
Sbjct: 316 VSWTAMLKGYTNCGRLDEASELFNAMP-----IKSVVACNAMILCFGQNGEVPKARQVFD 370

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
            M  E D   W A++      G ++L  L + R+   E
Sbjct: 371 QMR-EKDEGTWSAMIKVYERKG-LELDALELFRMMQRE 406



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 193/425 (45%), Gaps = 52/425 (12%)

Query: 82  FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
             +++ E DV  +T ++  Y + G L +AR +F++M  RN+ +W+ MI  Y ++Q+    
Sbjct: 244 LFDMMPEKDVVTRTNMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIA 303

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLA 200
            +LF +M +     ++  +  +L+   NCG   EA +L +++ IK  ++C     N+++ 
Sbjct: 304 RKLFEVMPE----KNEVSWTAMLKGYTNCGRLDEASELFNAMPIKSVVAC-----NAMIL 354

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK----- 255
            + + G++  AR+ F+ M EKD   W++MI  Y + G   +A  LF  M RE I+     
Sbjct: 355 CFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPS 414

Query: 256 ------------------------------LGVVTFNILIRSYNQLGQCDVAMEMVKRME 285
                                         L V   ++L+  Y + G    A ++  R  
Sbjct: 415 LISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRF- 473

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
                 DV  W  +I+G+AQ+G   +AL +F +M F G+MP+ VT    +SAC+    + 
Sbjct: 474 ---AVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVK 530

Query: 346 MGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAG 403
            G+EI +S+  K      +     ++++  +  +L EA + +  M  + D   W +++ G
Sbjct: 531 KGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL-G 589

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
            C+        E+  K      P N   + +L + Y   G  D+  +L + M      K 
Sbjct: 590 ACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKY 649

Query: 464 NTASW 468
              SW
Sbjct: 650 PGCSW 654



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 98/196 (50%), Gaps = 3/196 (1%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL 98
           +A+ +   +  +G +    + I++L  C    ++   R++HA  +    ++DV+V + LL
Sbjct: 395 DALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLL 454

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
           S+Y KCG L  A++VF+    +++  W+++I  Y++     E + +F  M   G+ PDD 
Sbjct: 455 SMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDV 514

Query: 159 LFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
            F  +L AC   G+ + G ++ +S+  K  +         ++ +  + GKL  A    E 
Sbjct: 515 TFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEK 574

Query: 218 MD-EKDGVAWNSMISG 232
           M  E D + W +++  
Sbjct: 575 MPMEADAIIWGALLGA 590


>gi|347954476|gb|AEP33738.1| chlororespiratory reduction 21, partial [Matthiola incana]
          Length = 784

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 219/752 (29%), Positives = 393/752 (52%), Gaps = 40/752 (5%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV 91
           LC NG + EA++++  +  +  ++    Y  +LQ C+    +   +++HA   ++ + D 
Sbjct: 22  LCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHA--QILKKGDF 79

Query: 92  F-----VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
           +     ++TKL+  YAKC  L+ A+ +F  +R RN+++W+A+IG   R       +  F 
Sbjct: 80  YARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFV 139

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M+++G+FPD+F+ P + +ACG       G+ +H  V K G+     V +S+  +Y KCG
Sbjct: 140 EMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCG 199

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            L  AR+ F+ + +++ VAWN+++ GY Q G N+EA RL  +M +E I+   VT +  + 
Sbjct: 200 VLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIEPTRVTVSTCLS 259

Query: 267 SYNQLGQ------------------------------CDVAMEMVKRMESLG-ITPDVFT 295
           +   +G                               C V +     M   G I     T
Sbjct: 260 ASANMGGIEEGKQSHAXXIVNGLXLDNILGTSILNFYCXVGLIEYAEMIFDGMIEKXXVT 319

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  +ISG+ Q G   +A+ + + M    +  + VT+++ +SA T  + L +G EI    +
Sbjct: 320 WNLLISGYVQQGLVEEAIHMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCI 379

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           + G   D+++ ++ ++MY+KC  +  A++VFD    KD+  WN++++ Y  +G  G+A  
Sbjct: 380 RHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALR 439

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           LF +MQ   VPPNVITWN++I   ++NG  +EA ++F +M ++  +  N  SW +++ G 
Sbjct: 440 LFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQM-QSSGIFPNLISWTTMMNGL 498

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES-S 534
            Q G    A+   RKMQ S   PN  TI   L ACA L + +  + IHG ++R    S S
Sbjct: 499 VQNGCSEEAILFLRKMQESGLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYSFS 558

Query: 535 LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
             +  SL+D YAK G+I  +  +F      ++  +N++I  Y L+G    A+ L+  ++ 
Sbjct: 559 AWIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLED 618

Query: 595 FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLE 654
            G+KP+  T  S++ A +    V+   +VF  +   + + P +EHY  M+DL   +G+ +
Sbjct: 619 GGVKPDNITITSLLSACNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLASAGETD 678

Query: 655 EAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYA 714
           +A+  +E+MP +PD+ + ++L  +C      +L     + L + EP +     +I   YA
Sbjct: 679 KALRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMISNAYA 738

Query: 715 ICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
           + G  ++  K+R++ +    +   G  WI++K
Sbjct: 739 VEGSWDEVAKMREMMKVKGLKKKPGCSWIQIK 770



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 3/198 (1%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--N 84
           T ++ L  NG   EAI  L  +   G +    T    L AC +  S+H  R +H ++  N
Sbjct: 493 TMMNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACANLASLHFGRSIHGYIIRN 552

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
                  +++T L+ +YAKCG ++ A  VF       L  ++AMI AY+   + RE + L
Sbjct: 553 QQYSFSAWIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITL 612

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           +  +   G+ PD+     +L AC    D  +A ++   +V K GM         ++ +  
Sbjct: 613 YRSLEDGGVKPDNITITSLLSACNYGRDVNQAIEVFSDMVSKHGMKPCLEHYGLMVDLLA 672

Query: 204 KCGKLIWARRFFESMDEK 221
             G+   A R  E M  K
Sbjct: 673 SAGETDKALRLMEEMPYK 690


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 259/809 (32%), Positives = 405/809 (50%), Gaps = 106/809 (13%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM--SCVRRVRNSVLAVYVKCGKLIWARR 213
           D    P  +++     D  + + +H+  ++ G+       V N++L  Y +CG+L  A  
Sbjct: 56  DHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALE 115

Query: 214 FFESMDEK--DGVAWNSMISGYFQIGENDE-----------AHRLFD------------- 247
            F S+ +   D V++NS+IS        D             H L               
Sbjct: 116 VFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHL 175

Query: 248 -------KMCREE----IKLGVV------TFNILIRSYNQLGQCDVAMEMVKRMESLGIT 290
                  ++ RE     +K G++       FN L+  Y +LG    A  +       G T
Sbjct: 176 PAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFA-----GAT 230

Query: 291 P---DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
           P   DV TW  M+S   Q+G   +A+    +M  +GV P+GVT  SA+ AC+ L+ L +G
Sbjct: 231 PGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVG 290

Query: 348 MEIHSLAVKMGFTDDVLVGNS-----LINMYSKCEELEAAERVFDMIKD--KDVYSWNSM 400
            E+H+  +K    DD L  NS     L++MY+  E++  A +VFDM+ D  K +  WN+M
Sbjct: 291 REMHAYVIK----DDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAM 346

Query: 401 IAGYCQAGYCGKAYELFIKMQESD--VPPNVITWNVL--------------ISGYI---- 440
           I GY QAG   +A  LF +M+     VP      +VL              + GY+    
Sbjct: 347 ICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRG 406

Query: 441 QNGN---EDEAVDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFR 489
             GN   ++  +D++ R+GK D  +R        +  SWN+LI G    G   +A  + R
Sbjct: 407 MAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAR 466

Query: 490 KMQS---SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
           +MQ        PN +T++++LP CA L A  + KEIHG  +R +L++ + V ++L+D YA
Sbjct: 467 EMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYA 526

Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG-LKPNRGTFL 605
           K G +  SR +FD +  ++ ITWN LI  Y +HG    A  LFD+M + G  +PN  TF+
Sbjct: 527 KCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFM 586

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
           + + A S +GMVD G ++F ++   + + P  +  + ++D+ GR+G+L+EA   +  M  
Sbjct: 587 AALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEA 646

Query: 666 -EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
            E   S W  +L ACR+H N+ L  +A ERL +LEP +     L+  IY+  G+   A +
Sbjct: 647 GEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAE 706

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS-----WLQNVPENVTAR 779
           VR   R        G  WIEV   ++ F+ G  +   S+ +++     W + V    T  
Sbjct: 707 VRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVHAHMEALWGEMVARGYTPD 766

Query: 780 SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVS 839
           +S     +++ +K  +   HSEKLA+AF L+ ++    TIR+ KN+R+C  CHE AK++S
Sbjct: 767 TSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGA-TIRVAKNLRVCNDCHEAAKFLS 825

Query: 840 MMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            M   EI L D +  HHF+NGQCSCGDYW
Sbjct: 826 KMVGREIVLRDVRRFHHFRNGQCSCGDYW 854



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 230/503 (45%), Gaps = 76/503 (15%)

Query: 59  TYINLLQAC----IDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAR 111
           T +++L+A       + ++ L R+ HAF     L+     F    LLS+YA+ G + DA+
Sbjct: 164 TLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQ 223

Query: 112 EVFEDMR--ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
            +F        ++ TW+ M+    +   + E V+  + MV  G+ PD   F   L AC  
Sbjct: 224 RLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSR 283

Query: 170 CGDFEAGKLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE--KDGVAW 226
               + G+ MH+ VIK   ++    V ++++ +Y    ++  AR+ F+ + +  K    W
Sbjct: 284 LELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMW 343

Query: 227 NSMISGYFQIGENDEAHRLFDKM--------------------CREE------------I 254
           N+MI GY Q G ++EA RLF +M                     R E            +
Sbjct: 344 NAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVV 403

Query: 255 KLGVV----TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTS 310
           K G+       N L+  Y +LG+ DVA    +R+ ++   PDV +W  +I+G    G  +
Sbjct: 404 KRGMAGNRFVQNALMDMYARLGKTDVA----RRIFAMVDLPDVVSWNTLITGCVVQGHVA 459

Query: 311 QALDLFKEMSFV---GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
            A  L +EM  +   GV+PN +T+ + +  C  L A A G EIH  AV+     DV VG+
Sbjct: 460 DAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGS 519

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES-DVP 426
           +L++MY+KC  L  +  VFD +  ++  +WN +I  Y   G  G+A  LF +M  S +  
Sbjct: 520 ALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEAR 579

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRM--------------------GKNDKVKRNTA 466
           PN +T+   ++    +G  D  + LF  M                    G+  ++    A
Sbjct: 580 PNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYA 639

Query: 467 SWNSLIAGYQQLGQKNNALGVFR 489
              S+ AG QQ+   +  LG  R
Sbjct: 640 MVTSMEAGEQQVSAWSTMLGACR 662



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 150/589 (25%), Positives = 249/589 (42%), Gaps = 85/589 (14%)

Query: 76  ARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE--RNLYTWSAMIG 130
           AR +HA      L+      V   LL+ YA+CG L  A EVF  + +   +  +++++I 
Sbjct: 76  ARAIHAAALRRGLLHRPSPAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLIS 135

Query: 131 AYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA----GKLMHSLVIKL 186
           A    +RW   +     M+  G     F    +L+A  +     A    G+  H+  +K 
Sbjct: 136 ALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKN 195

Query: 187 GM--SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG--VAWNSMISGYFQIGENDEA 242
           G+     R   N++L++Y + G +  A+R F       G  V WN+M+S   Q G  DEA
Sbjct: 196 GLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEA 255

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME----------------------- 279
            +    M    ++   VTF   + + ++L   DV  E                       
Sbjct: 256 VQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVD 315

Query: 280 MVKRMESLGITPDVF-----------TWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPN 327
           M    E +G    VF            W  MI G+AQ G   +AL LF  M +  G +P 
Sbjct: 316 MYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPC 375

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             T+ S + AC   +A A    +H   VK G   +  V N+L++MY++  + + A R+F 
Sbjct: 376 ETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFA 435

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ---ESDVPPNVITWNVLISG-----Y 439
           M+   DV SWN++I G    G+   A++L  +MQ   E  V PN IT   L+ G      
Sbjct: 436 MVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAA 495

Query: 440 IQNGNE-----------------DEAVDLFQRMG-------KNDKV-KRNTASWNSLIAG 474
              G E                    VD++ + G         D++ +RNT +WN LI  
Sbjct: 496 PARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMA 555

Query: 475 YQQLGQKNNALGVFRKMQSSC-FYPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLE 532
           Y   G    A  +F +M +S    PN VT ++ L AC++  +    ++  H       +E
Sbjct: 556 YGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVE 615

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS--KDIITWNSLICGYVLH 579
            +  ++  ++D   ++G +  +  +   M +  + +  W++++    LH
Sbjct: 616 PTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLH 664



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 219/490 (44%), Gaps = 52/490 (10%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +  L  +G  +EA+  L  +   G +    T+ + L AC     + + R++HA++  
Sbjct: 240 NTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIK 299

Query: 86  VTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRE--RNLYTWSAMIGAYSRDQRWREV 141
             E+  + FV + L+ +YA    +  AR+VF+ + +  + L  W+AMI  Y++     E 
Sbjct: 300 DDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEA 359

Query: 142 VELFFLM-VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
           + LF  M  + G  P +     +L AC     F   + +H  V+K GM+  R V+N+++ 
Sbjct: 360 LRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMD 419

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y + GK   ARR F  +D  D V+WN++I+G    G   +A +L  +M  ++++ G V 
Sbjct: 420 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREM--QQLEEGGVV 477

Query: 261 FNIL--------------------IRSY--NQLGQCDVA-----MEMVKRMESLGITPDV 293
            N +                    I  Y        DVA     ++M  +   L ++  V
Sbjct: 478 PNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAV 537

Query: 294 F---------TWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKA 343
           F         TW  +I  +  +G   +A  LF  M+  G   PN VT  +A++AC+    
Sbjct: 538 FDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGM 597

Query: 344 LAMGMEI-HSLAVKMGF--TDDVLVGNSLINMYSKCEELEAAERVFDMIK--DKDVYSWN 398
           +  G+++ H++    G   T D+L    ++++  +   L+ A  +   ++  ++ V +W+
Sbjct: 598 VDRGLQLFHAMERDHGVEPTPDILA--CVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWS 655

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           +M+ G C+        E+  +      P     + +L + Y   G    A ++  RM + 
Sbjct: 656 TML-GACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRR 714

Query: 459 DKVKRNTASW 468
              K    SW
Sbjct: 715 GVAKEPGCSW 724


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 256/887 (28%), Positives = 428/887 (48%), Gaps = 110/887 (12%)

Query: 57   RNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
            R+T   + + C+ S S   +  LH + + +  + DVFV   L+++YAK G + +AR +F+
Sbjct: 760  RHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFD 819

Query: 116  DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
             M  R++  W+ M+ AY       E + LF    + G  PDD     +            
Sbjct: 820  GMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTL------------ 867

Query: 176  GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
                 S V+K    C + +      + +K  K    + F    D  D + WN  +S + Q
Sbjct: 868  -----SRVVK----CKKNI------LELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQ 912

Query: 236  IGENDEAHRLFDKMCREEIKLGVVTF---------------------------------- 261
             GE  EA   F  M    +    +TF                                  
Sbjct: 913  RGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSV 972

Query: 262  -NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
             N LI  Y + G    A  +  +M  +    D+ +W  MISG   +G    ++ +F  + 
Sbjct: 973  GNCLINMYVKAGSVSRARSVFGQMNEV----DLISWNTMISGCTLSGLEECSVGMFVHLL 1028

Query: 321  FVGVMPNGVTITSAISACTDLKA-LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
               ++P+  T+ S + AC+ L+    +  +IH+ A+K G   D  V  +LI++YSK  ++
Sbjct: 1029 RDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKM 1088

Query: 380  EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
            E AE +F      D+ SWN+++ GY  +G   KA  L+I MQES    + IT   L++  
Sbjct: 1089 EEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQIT---LVNAA 1145

Query: 440  --------IQNGNEDEAV-----------------DLFQRMGKNDKVKR--------NTA 466
                    ++ G +  AV                 D++ + G+ +  +R        +  
Sbjct: 1146 KAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDV 1205

Query: 467  SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
            +W ++I+G  + GQ+ +AL  + +M+ S   P+  T  +++ AC+ L A  + ++IH  +
Sbjct: 1206 AWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANI 1265

Query: 527  LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
            ++ +      VM SL+D YAK GNI  +R +F   +++ I +WN++I G   HG    AL
Sbjct: 1266 VKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEAL 1325

Query: 587  DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
              F  MKS G+ P+R TF+ ++ A S +G+V    + F S+ + Y I P IEHYS ++D 
Sbjct: 1326 QFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDA 1385

Query: 647  YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
              R+G++EEA + I  MP E  +S++  LL ACR+  + +      E+L  LEP D    
Sbjct: 1386 LSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAY 1445

Query: 707  RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
             L+  +YA   + E+    R + R+   +   G  W+++KN V+ FV G  S   +D++Y
Sbjct: 1446 VLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIY 1505

Query: 767  SWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRI 821
            + ++ +      E     +  + + +EEE+KE     HSEKLA+A+ L+ +  +  T+R+
Sbjct: 1506 NKVEYIMKRIREEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPST-TLRV 1564

Query: 822  VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +KN+R+C  CH   KY+S +   EI L D+   HHF+NG CSCGDYW
Sbjct: 1565 IKNLRVCGDCHSAIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 168/672 (25%), Positives = 312/672 (46%), Gaps = 51/672 (7%)

Query: 62   NLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE- 119
            ++L+  I ++ + L ++ HA  L      D FV   L+++YAKCG L  AR++F+   + 
Sbjct: 661  SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 120  -RNLYTWSAMIGAYS-RDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             R+L TW+A++ A +    +  +   LF L+ +  +         + + C       A +
Sbjct: 721  NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780

Query: 178  LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
             +H   +K+G+     V  +++ +Y K G +  AR  F+ M  +D V WN M+  Y    
Sbjct: 781  SLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTC 840

Query: 238  ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT------- 290
               EA  LF +  R   +   VT    +R+ +++ +C   +  +K+ ++           
Sbjct: 841  LEYEAMLLFSEFHRTGFRPDDVT----LRTLSRVVKCKKNILELKQFKAYATKLFMYDDD 896

Query: 291  -PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
              DV  W   +S F Q G   +A+D F +M    V  +G+T    ++    L  L +G +
Sbjct: 897  GSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQ 956

Query: 350  IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
            IH + ++ G    V VGN LINMY K   +  A  VF  + + D+ SWN+MI+G   +G 
Sbjct: 957  IHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGL 1016

Query: 410  CGKAYELFIKMQESDVPPNVITW-------NVLISGY----------------IQNGNED 446
               +  +F+ +    + P+  T        + L  GY                + +    
Sbjct: 1017 EECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVST 1076

Query: 447  EAVDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
              +D++ + GK ++ +         + ASWN+++ GY   G    AL ++  MQ S    
Sbjct: 1077 ALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGERS 1136

Query: 499  NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
            + +T+++   A   LV   + K+IH  V++R     L V + ++D Y K G +  +R +F
Sbjct: 1137 DQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVF 1196

Query: 559  DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
              + S D + W ++I G V +G    AL  + QM+   ++P+  TF +++ A SL   ++
Sbjct: 1197 SEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALE 1256

Query: 619  LGKKVFCSITECY-QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
             G+++  +I +      P +   ++++D+Y + G +E+A    +       +S W A++ 
Sbjct: 1257 QGRQIHANIVKLNCAFDPFV--MTSLVDMYAKCGNIEDARGLFKRTNTRRIAS-WNAMIV 1313

Query: 678  ACRIHGNIDLAV 689
                HGN   A+
Sbjct: 1314 GLAQHGNAKEAL 1325



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 1/138 (0%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
            NG+   A+     +     +    T+  L++AC    ++   R++HA  + L    D FV
Sbjct: 1217 NGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFV 1276

Query: 94   KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
             T L+ +YAKCG ++DAR +F+    R + +W+AMI   ++    +E ++ F  M   G+
Sbjct: 1277 MTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGV 1336

Query: 154  FPDDFLFPKILQACGNCG 171
             PD   F  +L AC + G
Sbjct: 1337 MPDRVTFIGVLSACSHSG 1354



 Score = 47.4 bits (111), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 77/197 (39%), Gaps = 34/197 (17%)

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P C +IL    A + L      K  H  +L         V N+LI  YAK G++  +R +
Sbjct: 657 PQCFSILRQAIAASDLSLG---KRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKL 713

Query: 558 FDGM--SSKDIITWNSLICGYVLHG-FWHAALDLFDQMKSFGLKPNRGTFLSIILA---- 610
           FD    +++D++TWN+++     H    H    LF  ++   +   R T   +       
Sbjct: 714 FDTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLS 773

Query: 611 ---------HSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
                    H  A  + L   VF +               A++++Y + G + EA    +
Sbjct: 774 ASPSASESLHGYAVKIGLQWDVFVA--------------GALVNIYAKFGLIREARVLFD 819

Query: 662 DMPIEPDSSIWEALLTA 678
            M +  D  +W  ++ A
Sbjct: 820 GMAVR-DVVLWNVMMKA 835


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 243/795 (30%), Positives = 395/795 (49%), Gaps = 105/795 (13%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMR--ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           T L++ +A  G L DA   F+ +    R+    +AM+ A++R       V +F  ++  G
Sbjct: 98  TSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 157

Query: 153 -LFPDDFLFPKILQACGNCGDFEAGKL--MHSLVIKLGMSCVRRVRNSVLAVYVKC--GK 207
            L PDD+ F  ++ A G   +  A     +H  V+K G + V  V N+++A+Y+KC   +
Sbjct: 158 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 217

Query: 208 LIW-ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
             W AR+  + M +KD + W +M+ GY + G+ + A  +F     EE+            
Sbjct: 218 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVF-----EEVD----------- 261

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
                G+ DV                   W  MISG+ Q+G  + A +LF+ M    V  
Sbjct: 262 -----GKFDV------------------VWNAMISGYVQSGMCADAFELFRRMVSEKVPL 298

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKM--GFTDD--VLVGNSLINMYSKCEELEAA 382
           +  T TS +SAC +      G  +H   +++   F  +  + V N+L+ +YSK  ++  A
Sbjct: 299 DEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIA 358

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
           +R+FD +  KDV                                   ++WN ++SGYI +
Sbjct: 359 KRIFDTMNLKDV-----------------------------------VSWNTILSGYIDS 383

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G  D+AV++F+ M       +N  SW  +++GY   G   +AL +F +M++    P   T
Sbjct: 384 GCLDKAVEVFKVMPY-----KNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYT 438

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
               + AC  L A    +++H  +++   E+S    N+L+  YAK G +  +R +F  M 
Sbjct: 439 YAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP 498

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
           + D ++WN++I     HG    AL+LFDQM + G+ P+R +FL+I+ A + AG+VD G  
Sbjct: 499 NLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFH 558

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F S+   + I P  +HY+ +IDL GRSG++ EA + I+ MP EP  SIWEA+L+ CR +
Sbjct: 559 YFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTN 618

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
           G+++    A ++LF + P       L+   Y+  G+  DA +VRKL R+   +   G  W
Sbjct: 619 GDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSW 678

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKE 793
           IEV + ++ F+ G      +  +Y +L    E + AR    G           +E  EKE
Sbjct: 679 IEVGSKIHVFLVGDTKHPEAQEVYQFL----EVIGARMRKLGYVPDTKFVLHDMEPHEKE 734

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
            I   HSEKLA+ F L+       T+ ++KN+R+C  CH    ++S     EI + D + 
Sbjct: 735 YILFAHSEKLAVGFGLLKLPPGA-TVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRR 793

Query: 854 LHHFKNGQCSCGDYW 868
            HHFK+G+CSCG+YW
Sbjct: 794 FHHFKDGECSCGNYW 808



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 213/457 (46%), Gaps = 49/457 (10%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           N  I L   C    +   ARK+   L+ + + D    T ++  Y + G ++ AR VFE++
Sbjct: 204 NALIALYMKCDTPEASWDARKV---LDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEV 260

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             +    W+AMI  Y +     +  ELF  MV + +  D+F F  +L AC N G F  GK
Sbjct: 261 DGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGK 320

Query: 178 LMHSLVIKLGMSCVRR----VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
            +H  +I+L  + V      V N+++ +Y K GK++ A+R F++M+ KD V+WN+++SGY
Sbjct: 321 SVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGY 380

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
              G  D+A  +F  M  +                N L                      
Sbjct: 381 IDSGCLDKAVEVFKVMPYK----------------NDL---------------------- 402

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            +W  M+SG+   G +  AL LF +M    V P   T   AI+AC +L AL  G ++H+ 
Sbjct: 403 -SWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAH 461

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            V+ GF      GN+L+ MY+KC  +  A  VF ++ + D  SWN+MI+   Q G+  +A
Sbjct: 462 LVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREA 521

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            ELF +M    + P+ I++  +++     G  DE    F+ M ++  +      +  LI 
Sbjct: 522 LELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLID 581

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
              + G+   A  + + M    F P      ++L  C
Sbjct: 582 LLGRSGRIGEARDLIKTMP---FEPTPSIWEAILSGC 615



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 160/367 (43%), Gaps = 15/367 (4%)

Query: 31  FLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID 90
           F+ G     + I +  +   + A    N  + L         I +A+++   +NL    D
Sbjct: 316 FVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYS---KGGKIVIAKRIFDTMNLK---D 369

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           V     +LS Y   GCLD A EVF+ M  +N  +W  M+  Y       + ++LF  M  
Sbjct: 370 VVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRA 429

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + + P D+ +   + ACG  G  + G+ +H+ +++ G        N++L +Y KCG +  
Sbjct: 430 EDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVND 489

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           AR  F  M   D V+WN+MIS   Q G   EA  LFD+M  E I    ++F  ++ + N 
Sbjct: 490 ARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNH 549

Query: 271 LGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G  D      + M+   GI+P    +  +I    ++GR  +A DL K M F    P   
Sbjct: 550 AGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPF---EPTPS 606

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFD 387
              + +S C     +  G        +M    D   G  ++  N YS       A RV  
Sbjct: 607 IWEAILSGCRTNGDMEFGAYAADQLFRMIPQHD---GTYILLSNTYSAAGRWVDAARVRK 663

Query: 388 MIKDKDV 394
           +++D+ V
Sbjct: 664 LMRDRGV 670


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 219/647 (33%), Positives = 344/647 (53%), Gaps = 70/647 (10%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGME 349
           P+ F W  +I  +A       ++  F +M S     PN  T    I A  ++ +L++G  
Sbjct: 93  PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H +AVK     DV V NSLI+ Y  C +L++A +VF  IK+KDV SWNSMI G+ Q G 
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212

Query: 410 CGKAYELFIKMQ-----------------------------------ESDVPPNVITWNV 434
             KA ELF KM+                                   E+ V  N+   N 
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKV--------------------------KRNTASW 468
           ++  Y + G+ ++A  LF  M + D V                          +++  +W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQ-SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           N+LI+ Y+Q G+ N AL VF ++Q       N +T++S L ACA + A    + IH  + 
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           +  +  +  V ++LI  Y+K G++  SR +F+ +  +D+  W+++I G  +HG  + A+D
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           +F +M+   +KPN  TF ++  A S  G+VD  + +F  +   Y I+P  +HY+ ++D+ 
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           GRSG LE+A++FIE MPI P +S+W ALL AC+IH N++LA +A  RL +LEP +     
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
           L+  IYA  GK E+  ++RK  R    +   G   IE+  +++ F++G  +   S+ +Y 
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632

Query: 768 WLQNVPENVTARSSHSGLC-----IEEEE-KEEISGIHSEKLALAFALIGSSQAPHTIRI 821
            L  V E + +      +      IEEEE KE+   +HSEKLA+ + LI S++AP  IR+
Sbjct: 633 KLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLI-STEAPKVIRV 691

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +KN+R+C  CH  AK +S ++  EI + D    HHF+NGQCSC D+W
Sbjct: 692 IKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 221/470 (47%), Gaps = 70/470 (14%)

Query: 56  RRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYA--KCGCLDDARE 112
            R+ +I+L++ C+   S+   ++ H   +   T  D +  +KL ++ A      L+ AR+
Sbjct: 29  ERSRHISLIERCV---SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARK 85

Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCG 171
           VF+++ + N + W+ +I AY+        +  F  MV +   +P+ + FP +++A     
Sbjct: 86  VFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS 145

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
               G+ +H + +K  +     V NS++  Y  CG L  A + F ++ EKD V+WNSMI+
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMIN 205

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------------------ 261
           G+ Q G  D+A  LF KM  E++K   VT                               
Sbjct: 206 GFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV 265

Query: 262 -----NILIRSYNQLGQCDVAMEMVKRMES-------------------------LGITP 291
                N ++  Y + G  + A  +   ME                          L   P
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325

Query: 292 --DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP-NGVTITSAISACTDLKALAMGM 348
             D+  W  +IS + QNG+ ++AL +F E+     M  N +T+ S +SAC  + AL +G 
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
            IHS   K G   +  V ++LI+MYSKC +LE +  VF+ ++ +DV+ W++MI G    G
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
              +A ++F KMQE++V PN +T+  +       G  DEA  LF +M  N
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 495


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 252/804 (31%), Positives = 384/804 (47%), Gaps = 129/804 (16%)

Query: 192 RRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR 251
           R +   V+A Y+ CG   +A    E +     V WN +I  + + G  D A  +  +M R
Sbjct: 89  RSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 148

Query: 252 EEIKLGVVTF-----------------------------------NILIRSYNQLGQCDV 276
              +    T                                    N L+  Y++ G  + 
Sbjct: 149 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 208

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF-VGVMPNG-----VT 330
           A  +   +   GI  DV +W  ++S   ++     ALDLF +M+  V   P       ++
Sbjct: 209 ASMIFDEITQRGID-DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 267

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
           I + + AC  LKA+    E+H  A++ G   DV VGN+LI+ Y+KC  +E A +VF+M++
Sbjct: 268 IVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME 327

Query: 391 DKDVYSWNSMIAGYCQ------------------------------AGYCGK-----AYE 415
            KDV SWN+M+AGY Q                              AGY  +     A  
Sbjct: 328 FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 387

Query: 416 LFIKMQESDVPPNVITW-------------------------NVLISGYIQNGNEDE--- 447
           LF +M  S   PN +T                          N L++     G EDE   
Sbjct: 388 LFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLM 447

Query: 448 ----AVDLFQRMGKNDKVK----------RNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
                +D++ +       +          RN  +W  +I G+ Q G  N+AL +F +M S
Sbjct: 448 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 507

Query: 494 SCF--YPNCVTILSVLPACAYLVASNKVKEIHGCVLR--RSLESSLPVMNSLIDTYAKSG 549
             +   PN  TI  +L ACA+L A    K+IH  VLR  R   S+  V N LID Y+K G
Sbjct: 508 EPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCG 567

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
           ++  +R +FD MS K  I+W S++ GY +HG    ALD+FD+M+  G  P+  TFL ++ 
Sbjct: 568 DVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLY 627

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDS 669
           A S  GMVD G   F S++  Y + P  EHY+  IDL  RSG+L++A   ++DMP+EP +
Sbjct: 628 ACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTA 687

Query: 670 SIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLE 729
            +W ALL+ACR+H N++LA  A+ +L ++   +     LI  IYA  G+ +D  ++R L 
Sbjct: 688 VVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLM 747

Query: 730 RENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA-----RSSHSG 784
           +++  +   G  W++ +    +F  G  S   S  +Y+ L+++ + + A      ++ + 
Sbjct: 748 KKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFAL 807

Query: 785 LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
             ++EEEK  +   HSEKLALA+ L+ +S     IRI KN+R+C  CH    Y+S +   
Sbjct: 808 HDVDEEEKNNLLVEHSEKLALAYGLLTTSPGC-PIRITKNLRVCGDCHSAFTYISKIVDH 866

Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
           EI + D    HHFKNG CSCG YW
Sbjct: 867 EIVVRDPSRFHHFKNGSCSCGGYW 890



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 165/638 (25%), Positives = 283/638 (44%), Gaps = 94/638 (14%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           GRL+ AI V   +   G +    T  ++L+AC +  S       H  +     E +VF+ 
Sbjct: 134 GRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFIC 193

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRER---NLYTWSAMIGAYSRDQRWREVVELFFLMV-- 149
             L+++Y++CG L++A  +F+++ +R   ++ +W++++ A+ +       ++LF  M   
Sbjct: 194 NALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLI 253

Query: 150 ----QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
                     D      IL ACG+       K +H   I+ G      V N+++  Y KC
Sbjct: 254 VHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKC 313

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G +  A + F  M+ KD V+WN+M++GY Q G  + A  LF  M +E I L VVT+  +I
Sbjct: 314 GLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVI 373

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             Y+Q G    A+ + ++M   G  P                                  
Sbjct: 374 AGYSQRGCSHEALNLFRQMIFSGSLP---------------------------------- 399

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKM----------GFTDDVLVGNSLINMYSK 375
            N VTI S +SAC  L A + G EIH+ ++K           G  +D++V N+LI+MYSK
Sbjct: 400 -NCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 458

Query: 376 CEELEAAERVFDMI--KDKDVYSWNSMIAGYCQAGYCGKAYELFIKM--QESDVPPNVIT 431
           C   +AA  +FD I  ++++V +W  MI G+ Q G    A +LF++M  +   V PN  T
Sbjct: 459 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 518

Query: 432 WNVL---------------ISGYIQNGNEDEA---------VDLFQRMGKNDKVK----- 462
            + +               I  Y+   +  E+         +D++ + G  D  +     
Sbjct: 519 ISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDS 578

Query: 463 ---RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL-VASNK 518
              ++  SW S++ GY   G+ + AL +F KM+ + F P+ +T L VL AC++  +    
Sbjct: 579 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 638

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS-RTIFDGMSSKDIITWNSLICGYV 577
           +           L          ID  A+SG +  + RT+ D       + W +L+    
Sbjct: 639 LSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACR 698

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
           +H     A    +++     + N G++  I   ++ AG
Sbjct: 699 VHSNVELAEHALNKLVEMNAE-NDGSYTLISNIYATAG 735


>gi|347954480|gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
          Length = 807

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 220/752 (29%), Positives = 397/752 (52%), Gaps = 40/752 (5%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV 91
           LC NG + EA++++  +  +  ++    Y  +LQ C+    +   +++HA   ++ + D 
Sbjct: 21  LCKNGEIREALSLVTEMDYRNIRIGPEIYGEILQGCVYERDLCTGQQIHA--QILKKGDF 78

Query: 92  F-----VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
           +     ++TKL+  YAKC  L+ A+ +F  +R RN+++W+A+IG   R       +  F 
Sbjct: 79  YARNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLGEGALMGFV 138

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M+++G+FPD+F+ P + +ACG       G+ +H  V K G+     V +S+  +Y KCG
Sbjct: 139 EMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCG 198

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            L  AR+ F+ + +++ VAWN+++ GY Q G  +EA RL  +M +E I+   VT +  + 
Sbjct: 199 VLDDARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIEPTRVTVSTCLS 258

Query: 267 SYNQLGQCDV-----AMEMVKRME---SLG-----------------------ITPDVFT 295
           +   +G  +      A+ +V  +E    LG                       I  DV T
Sbjct: 259 ASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDGMIEKDVVT 318

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  +ISG+ Q G   +A+ + + M    +  + VT+++ +SA T  + L +G EI    +
Sbjct: 319 WNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAATSTQNLKLGKEIQCYCI 378

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           + G   D+++ ++ ++MY+KC  +  A++VFD    KD+  WN++++ Y  +G  G+A  
Sbjct: 379 RHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNTLLSAYADSGLSGEALR 438

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           LF +MQ   VPPNVITWN++I   ++NG  +EA ++F +M ++  +  N  SW +++ G 
Sbjct: 439 LFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQM-QSSGIFPNLISWTTMMNGL 497

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES-S 534
            Q G    A+   RKMQ S   PN  TI   L AC  L + +  + IHG ++R    S S
Sbjct: 498 VQNGCSEEAILFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQQYSFS 557

Query: 535 LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
             +  SL+D YAK G+I  +  +F      ++  +N++I  Y L+G    A+ L+  ++ 
Sbjct: 558 ASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSLED 617

Query: 595 FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLE 654
            G+KP+  T  S++ A +    V+   +VF  +   + + P +EHY  M+DL   +G+ +
Sbjct: 618 GGVKPDNITITSLLSACNYGRDVNQAIEVFRDMVSKHGMKPCLEHYGLMVDLLASAGETD 677

Query: 655 EAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYA 714
           +A+  +E+MP +PD+ + ++L  +C      +L     + L + EP +     +I   YA
Sbjct: 678 KALRLMEEMPYKPDARMVQSLFESCSKQHKTELVEYLSKHLLESEPDNSGNYVMISNAYA 737

Query: 715 ICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
           + G  ++  K+R++ +    +   G  WI++K
Sbjct: 738 VEGSWDEVAKMREMMKVKGLKKKPGCSWIQIK 769



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 3/198 (1%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--N 84
           T ++ L  NG   EAI  L  +   G +    T    L AC++  S+H  R +H ++  N
Sbjct: 492 TMMNGLVQNGCSEEAILFLRKMQESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRN 551

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
                   ++T L+ +YAKCG ++ A  VF       L  ++AMI AY+   + RE + L
Sbjct: 552 QQYSFSASIETSLVDMYAKCGDINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITL 611

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           +  +   G+ PD+     +L AC    D  +A ++   +V K GM         ++ +  
Sbjct: 612 YRSLEDGGVKPDNITITSLLSACNYGRDVNQAIEVFRDMVSKHGMKPCLEHYGLMVDLLA 671

Query: 204 KCGKLIWARRFFESMDEK 221
             G+   A R  E M  K
Sbjct: 672 SAGETDKALRLMEEMPYK 689


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 214/616 (34%), Positives = 335/616 (54%), Gaps = 44/616 (7%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           D   W  M+SG  +N    +A+ +F +M   G+  +  T+ + +    +L+ LA+GM I 
Sbjct: 171 DTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQ 230

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
            LA+K+GF     V   L  +YSKC E+E A  +F  I   D+ S+N+MI+GY       
Sbjct: 231 CLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETE 290

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGN----------------------EDEAV 449
            +  LF ++  S    N  +   LI  +   G+                           
Sbjct: 291 SSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALT 350

Query: 450 DLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            ++ R+ +        ++  +++ ASWN++I+GY Q G    A+ +F++MQ     PN V
Sbjct: 351 TVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPV 410

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           T+ S+L ACA L A +  K +H  + R S ES++ V  +LID YAK G+I  ++ +F  M
Sbjct: 411 TVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMM 470

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
             K+ +TWN++I GY LHG+ H AL+LF++M    + P   TFLS++ A S AG+V  G 
Sbjct: 471 PEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGD 530

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
           ++F S+   +   P+ EHY+ M+DL GR+G L++A++FI  MP+EP   +W ALL AC I
Sbjct: 531 EIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMI 590

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H + +LA LA ++LF+L+P +V    L+  IY+      +A  VR + +      + G  
Sbjct: 591 HKDANLARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCT 650

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEK 792
            IEV N ++ F +G  S   +  +Y+ L    E +T +   +G           +EEEEK
Sbjct: 651 LIEVANTLHIFTSGDQSHPQATAIYAML----EKLTGKMREAGFQTETGTALHDVEEEEK 706

Query: 793 EEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
           E +  +HSEKLA+AF LI +S+    IRI+KN+R+C+ CH   K++S +    I + D+ 
Sbjct: 707 ELMVKVHSEKLAIAFGLI-TSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDAN 765

Query: 853 CLHHFKNGQCSCGDYW 868
             HHFK+G CSCGDYW
Sbjct: 766 RFHHFKDGICSCGDYW 781



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 209/433 (48%), Gaps = 31/433 (7%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D+FV + +++ Y K   +  AR+VF+ M ER+   W+ M+    ++  + E + +F  MV
Sbjct: 140 DLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMV 199

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           + G+  D      +L       D   G  +  L +K+G      V   +  +Y KCG++ 
Sbjct: 200 KGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIE 259

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            AR  F  + + D V++N+MISGY    E + + RLF ++     K+   +   LI  + 
Sbjct: 260 TARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFF 319

Query: 270 QLGQCDV---------------------AMEMV----KRMESLGITPD------VFTWTC 298
             G   +                     A+  V      +ES  +  D      + +W  
Sbjct: 320 PFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNA 379

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           MISG+AQNG T +A+ LF+EM    V PN VT+TS +SAC  L AL++G  +H L  +  
Sbjct: 380 MISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRES 439

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
           F  ++ V  +LI+MY+KC  +  A+R+F M+ +K+  +WN+MI+GY   GY  +A  LF 
Sbjct: 440 FESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFN 499

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
           +M  S V P  +T+  ++      G   E  ++F+ M  +   +     +  ++    + 
Sbjct: 500 EMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRA 559

Query: 479 GQKNNALGVFRKM 491
           G  + AL   RKM
Sbjct: 560 GNLDKALDFIRKM 572



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 145/567 (25%), Positives = 244/567 (43%), Gaps = 74/567 (13%)

Query: 51  QGAKVRRNTYINLLQACIDSNSIHLARKLHA--FLNLVTEIDVFVKTKLLSVYAKCGCLD 108
           +G    RN ++ L+      +++H   + HA   LN +   D+   TKL    +    +D
Sbjct: 4   RGIASTRNLFLTLINRV---STLHQLNQTHAQIILNGLHN-DLVTVTKLTHKLSHLKAID 59

Query: 109 DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF-FLMVQDGLFPDDFLFPKILQAC 167
            A  +F  +   +L+ ++ +I A+S +      V L+  L     L PD+F +  ++   
Sbjct: 60  QASLLFSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGA 119

Query: 168 GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
            +          HS+V   G      V ++++A Y K  ++  AR+ F+ M E+D V WN
Sbjct: 120 -SSLGLGLLLHAHSIVAGFGSDLF--VGSAIVACYFKFSRVAAARKVFDGMLERDTVLWN 176

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG--------QCDVAME 279
           +M+SG  +    DEA  +F  M +  I     T   ++    +L         QC +AM+
Sbjct: 177 TMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQC-LAMK 235

Query: 280 MVKRMESLGIT------------------------PDVFTWTCMISGFAQNGRTSQALDL 315
           +     +  IT                        PD+ ++  MISG+  N  T  ++ L
Sbjct: 236 VGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRL 295

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           FKE+   G   N  +I   I        L +   IH    K G   +  V  +L  +YS+
Sbjct: 296 FKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSR 355

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
             E+E+A  +FD   +K + SWN+MI+GY Q G   KA  LF +MQ+ +V PN +T   +
Sbjct: 356 LNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSI 415

Query: 436 ISGYIQNGN----------------------EDEAVDLFQRMGKNDKVKR--------NT 465
           +S   Q G                           +D++ + G   + +R        N 
Sbjct: 416 LSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNA 475

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
            +WN++I+GY   G  + AL +F +M  S   P  VT LSVL AC++     +  EI   
Sbjct: 476 VTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRS 535

Query: 526 VLRRSLESSLPVMNS-LIDTYAKSGNI 551
           ++       LP   + ++D   ++GN+
Sbjct: 536 MVHDHGFEPLPEHYACMVDLLGRAGNL 562



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 141/306 (46%), Gaps = 5/306 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N     ++ +   +   G KV  ++ + L+        +HL R +H F        +  V
Sbjct: 286 NNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSV 345

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L +VY++   ++ AR +F++  E++L +W+AMI  Y+++    + + LF  M +  +
Sbjct: 346 STALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEV 405

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+      IL AC   G    GK +H L+ +        V  +++ +Y KCG +  A+R
Sbjct: 406 RPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQR 465

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F  M EK+ V WN+MISGY   G   EA  LF++M    +    VTF  ++ + +  G 
Sbjct: 466 LFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGL 525

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
                E+ + M    G  P    + CM+    + G   +ALD  ++M    V P      
Sbjct: 526 VREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMP---VEPGPPVWG 582

Query: 333 SAISAC 338
           + + AC
Sbjct: 583 ALLGAC 588



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 103/513 (20%), Positives = 210/513 (40%), Gaps = 79/513 (15%)

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           + H+  +  G  +D++    L +  S  + ++ A  +F  I + D++ +N +I  +    
Sbjct: 28  QTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNVLIRAFSLNN 87

Query: 409 YCGKAYELFIKMQES-DVPPNVITWNVLI------------------SGYIQNGNEDEAV 449
               A  L+  +++S  + P+  T+  +I                  +G+  +     A+
Sbjct: 88  SPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIVAGFGSDLFVGSAI 147

Query: 450 DL----FQRMGKNDKV-----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
                 F R+    KV     +R+T  WN++++G  +    + A+ +F  M       + 
Sbjct: 148 VACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDS 207

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
            T+ +VLP  A L        I    ++    S   V+  L   Y+K G I  +R +F  
Sbjct: 208 TTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQ 267

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           +   D++++N++I GY  +    +++ LF ++   G K N  + + +I      G + L 
Sbjct: 268 IGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGHLHLT 327

Query: 621 KKV--FCS-------------ITECYQIIPMIE---------------HYSAMIDLYGRS 650
           + +  FC+             +T  Y  +  IE                ++AMI  Y ++
Sbjct: 328 RCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISGYAQN 387

Query: 651 GKLEEAMEFIEDM---PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP--GDVLI 705
           G  E+A+   ++M    + P+     ++L+AC   G + L    +  L + E    ++ +
Sbjct: 388 GLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKW-VHDLINRESFESNIFV 446

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
              ++ +YA CG   +A ++  +  E   +N+    W     ++  +   G+     +L 
Sbjct: 447 STALIDMYAKCGSITEAQRLFSMMPE---KNAV--TW---NAMISGYGLHGYGHEALNLF 498

Query: 766 YSWLQN--VPENVTARS-----SHSGLCIEEEE 791
              L +   P  VT  S     SH+GL  E +E
Sbjct: 499 NEMLHSRVSPTGVTFLSVLYACSHAGLVREGDE 531


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 250/875 (28%), Positives = 427/875 (48%), Gaps = 71/875 (8%)

Query: 52   GAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDA 110
            G  + R T   LL+ C+ S  + ++  +H + + +  E+D+FV   L+++Y K G +  A
Sbjct: 712  GFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQA 771

Query: 111  REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
            R +F+ M ER+   W+ M+ AY  +    E +  F    + G  PD   F  +    G  
Sbjct: 772  RLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPD---FSNLHCVIGGV 828

Query: 171  -GDFEAGKLMHSLVIK---LGMSCVRRVRN-----SVLAVYVKCGKLIWA----RRFFES 217
              D    +  H+  +K   + M    +  N       L  ++  G+++ A    +    S
Sbjct: 829  NSDVSNNRKRHAEQVKAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRS 888

Query: 218  MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
                D V    ++S      + D   ++   + +      V   N L+  Y++ G    A
Sbjct: 889  TIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAA 948

Query: 278  MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
             +       L    D+ +W  MIS +AQN    +A+  F+++   G+ P+  T+ S + A
Sbjct: 949  EKTFINSPEL----DLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRA 1004

Query: 338  CT---DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
            C+   + +   +G ++H  A+K G  +D  V  +LI++YSK  +++ AE +     D D+
Sbjct: 1005 CSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDL 1064

Query: 395  YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG---------------- 438
             SWN+++ GY ++    KA E F  M E  +P + IT    I                  
Sbjct: 1065 ASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAY 1124

Query: 439  -------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
                               YI+ G+   A++LF  + + D+V     +W ++I+GY + G
Sbjct: 1125 AIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEV-----AWTTMISGYIENG 1179

Query: 480  QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
             +++AL V+  M+ S   P+  T  +++ A + L A  + K+IH  V++        V  
Sbjct: 1180 DEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGT 1239

Query: 540  SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
            SL+D Y K G++  +  +F  M  + ++ WN+++ G   HG    AL+LF  M+S G++P
Sbjct: 1240 SLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQP 1299

Query: 600  NRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEF 659
            ++ TF+ ++ A S +G+     K F ++ + Y I P IEHYS ++D  GR+G+++EA   
Sbjct: 1300 DKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENV 1359

Query: 660  IEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKP 719
            I  MP +  +S++ ALL ACR  G+ + A    ++L  L+P D     L+  IYA   + 
Sbjct: 1360 IASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQW 1419

Query: 720  EDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTAR 779
            +D    R + +    +   G  WI+VKN V+ FV    S   + L+Y  ++++ + +   
Sbjct: 1420 DDVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFVVDDRSHPQASLIYEKIEDLMKRIREE 1479

Query: 780  SSH------SGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHE 833
             S+      + L +EEEEKE     HSEKLA+AF LI S+    TIR++KN+R+C  CH 
Sbjct: 1480 GSYVPDTDFTLLDVEEEEKERALYYHSEKLAIAFGLI-STPPSATIRVIKNLRVCGDCHS 1538

Query: 834  TAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              K +S +   EI L D+   HHF+NG CSCGDYW
Sbjct: 1539 AIKCISKLTQREIVLRDANRFHHFRNGTCSCGDYW 1573



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 167/673 (24%), Positives = 311/673 (46%), Gaps = 53/673 (7%)

Query: 65   QACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLY 123
            ++ I    + L ++ HA +    ++ D ++   L+++Y+KCG L  AR+VF+   +R+L 
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678

Query: 124  TWSAMIGAYSR--DQRWREVVE---LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
            TW++++ AY++  D  +  V+E   LF L+ + G          +L+ C   G  +  + 
Sbjct: 679  TWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSET 738

Query: 179  MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
            +H   +K+G      V  +++ +Y K G +  AR  F+ M E+D V WN M+  Y +   
Sbjct: 739  VHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSF 798

Query: 239  NDEAHRLFDKMCREEIKLGVVTFNILIR------SYNQLGQCDVAMEMVKRMESLGITPD 292
             DEA R F    R          + +I       S N+    +       +M       +
Sbjct: 799  QDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQVKAYAMKMFPFDQGSN 858

Query: 293  VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
            +F W   ++ F   G+   A+D FK +    +  + VT+   +SA      L +G +IH+
Sbjct: 859  IFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHA 918

Query: 353  LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
            L +K  F   V V NSL+NMYSK   + AAE+ F    + D+ SWN+MI+ Y Q     +
Sbjct: 919  LVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSYAQNNLEME 978

Query: 413  AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE------------------------- 447
            A   F  +    + P+  T   ++      G+E E                         
Sbjct: 979  AICTFRDLLRDGLKPDQFTLASVLRA-CSTGDEGEYFTLGSQVHVYAIKCGIINDSFVST 1037

Query: 448  -AVDLFQRMGKND--------KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
              +DL+ + GK D        K   + ASWN+++ GY +  +   AL  F  M       
Sbjct: 1038 ALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPI 1097

Query: 499  NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
            + +T+ + + A   L+   + K+I    ++    + L V + ++D Y K G++  +  +F
Sbjct: 1098 DEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELF 1157

Query: 559  DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
              +S  D + W ++I GY+ +G    AL ++  M+  G++P+  TF ++I A S    ++
Sbjct: 1158 GEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALE 1217

Query: 619  LGKKVFCSITECYQIIPMIEHY--SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
             GK++  ++    ++   ++H+  ++++D+Y + G +++A      M +      W A+L
Sbjct: 1218 QGKQIHANVV---KLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVR-KVVFWNAML 1273

Query: 677  TACRIHGNIDLAV 689
                 HG++D A+
Sbjct: 1274 LGLAQHGHVDEAL 1286



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 203/474 (42%), Gaps = 54/474 (11%)

Query: 40   EAITVLDSIATQGAKVRRNTYINLLQACIDSNS---IHLARKLHAFLNLVTEI-DVFVKT 95
            EAI     +   G K  + T  ++L+AC   +      L  ++H +      I D FV T
Sbjct: 978  EAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVST 1037

Query: 96   KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
             L+ +Y+K G +D+A  +     + +L +W+A++  Y +  + R+ +E F LM + G+  
Sbjct: 1038 ALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPI 1097

Query: 156  DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
            D+      ++A G   + + GK + +  IKLG +    V + VL +Y+KCG +  A   F
Sbjct: 1098 DEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELF 1157

Query: 216  ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
              +   D VAW +MISGY + G+ D A  ++  M    ++    TF  LI++      C 
Sbjct: 1158 GEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKA----SSCL 1213

Query: 276  VAMEMVKRMESLGITPD-----------------------------------VFTWTCMI 300
             A+E  K++ +  +  D                                   V  W  M+
Sbjct: 1214 TALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAML 1273

Query: 301  SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM-GF 359
             G AQ+G   +AL+LF+ M   G+ P+ VT    +SAC+     +   +      K  G 
Sbjct: 1274 LGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGI 1333

Query: 360  TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ----AGYCGKAYE 415
            T ++   + L++   +   ++ AE V   +  K   S    + G C+    A    +  +
Sbjct: 1334 TPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVAD 1393

Query: 416  LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
              + +  SD    V+  N+    Y  +   D+  D  + M K   VK++   SW
Sbjct: 1394 KLLALDPSDSSAYVLLSNI----YAASRQWDDVTDA-RNMMKLKNVKKDPGFSW 1442


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 251/750 (33%), Positives = 375/750 (50%), Gaps = 90/750 (12%)

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
           R+ N++L++ V+ G+   A R F  M E+D  +WN M+ GY + G  +EA  L+ +M   
Sbjct: 130 RLGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWA 189

Query: 253 EIKLGVVTFNILIRS--------------------------------YNQLGQCDVAMEM 280
            ++  V TF  ++RS                                     +C   +  
Sbjct: 190 GVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAA 249

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
            K  +S+ +  D  +W  MI+G  +NG  +  L+LF  M    V PN +TITS   A   
Sbjct: 250 RKVFDSMAVM-DCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGL 308

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
           L  +    E+H LAVK GF  DV   NSLI MY+    +  A  VF  +  +D  SW +M
Sbjct: 309 LSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAM 368

Query: 401 IAGYCQAGYCGKAYELFIKMQESDVPPN-------------------------------- 428
           I+GY + G+  KA E++  M+ ++V P+                                
Sbjct: 369 ISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGF 428

Query: 429 ---VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL 485
              V+  N L+  Y ++   D+A+++F+ M + D V     SW+S+IAG+    +   AL
Sbjct: 429 MSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVV-----SWSSMIAGFCFNHRNFEAL 483

Query: 486 GVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL--ESSLPVMNSLID 543
             FR M +    PN VT ++ L ACA   A    KEIH  VLR  +  E  LP  N+LID
Sbjct: 484 YYFRHMLAD-VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLP--NALID 540

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGT 603
            Y K G   Y+   F    +KD+++WN +I G+V HG    AL  F+QM   G  P+  T
Sbjct: 541 LYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVT 600

Query: 604 FLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
           F++++ A S  GMV  G ++F S+T+ Y I+P ++HY+ M+DL  R G+L EA  FI +M
Sbjct: 601 FVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEM 660

Query: 664 PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDAL 723
           PI PD+++W ALL  CRIH +++L  LA + + +LEP D     L+  +YA  G  +   
Sbjct: 661 PITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLA 720

Query: 724 KVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHS 783
           +VRK  RE    +  G  W+EVK +V+ F+T    ES+  +    +  V E +  R   S
Sbjct: 721 RVRKTMREKGLDHDSGCSWVEVKGVVHAFLTD--DESHPQI--REINTVLEGIYERMKAS 776

Query: 784 GLCIEEEE-------KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAK 836
           G    E         K++I   HSE+LA+AF LI ++    +I + KN   C  CH   K
Sbjct: 777 GCAPVESHSPEDKVLKDDIFCGHSERLAVAFGLINTTPGT-SISVTKNQYTCQSCHRILK 835

Query: 837 YVSMMHHCEIFLADSKCLHHFKNGQCSCGD 866
            +S +   +I + DSK +HHFK+G CSCGD
Sbjct: 836 MISYIVRRDIIVRDSKQVHHFKDGSCSCGD 865



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 179/650 (27%), Positives = 307/650 (47%), Gaps = 90/650 (13%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHL-------ARKLHA 81
           L  LC +G+L +A+ +L+S A    +   + Y+ L + C    ++         A   HA
Sbjct: 69  LRALCSHGQLAQALWLLESSAEPPDE---DAYVALFRLCEWRRAVEPGLRACAHADDRHA 125

Query: 82  FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           +  L       +   +LS+  + G    A  VF  M ER++++W+ M+G Y +     E 
Sbjct: 126 WFGLR------LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEA 179

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
           ++L+  M+  G+ PD + FP +L++CG   D+  G+ +H+ V++ G +    V N+++ +
Sbjct: 180 LDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTM 239

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           Y KCG ++ AR+ F+SM   D ++WN+MI+G+F+ GE +    LF  M ++E++  ++T 
Sbjct: 240 YAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTI 299

Query: 262 -----------------------------------NILIRSYNQLGQCDVAMEMVKRMES 286
                                              N LI+ Y  LG    A  +  RM+ 
Sbjct: 300 TSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMD- 358

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
              T D  +WT MISG+ +NG   +AL+++  M    V P+ +TI SA++AC  L +L +
Sbjct: 359 ---TRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDV 415

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G+++H LA   GF   V+V N+L+ MY+K + ++ A  VF  + +KDV SW+SMIAG+C 
Sbjct: 416 GVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCF 475

Query: 407 AGYCGKAYELFIKMQESDVPPNVITW---------------------NVLISGYIQNGNE 445
                +A   F  M  +DV PN +T+                     +VL  G    G  
Sbjct: 476 NHRNFEALYYFRHML-ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYL 534

Query: 446 DEA-VDLFQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
             A +DL+ + G+             ++  SWN +IAG+   G    AL  F +M     
Sbjct: 535 PNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGE 594

Query: 497 YPNCVTILSVLPACAY-LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
            P+ VT +++L AC+   + S   +  H    + S+  +L     ++D  ++ G +  + 
Sbjct: 595 CPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAY 654

Query: 556 TIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
              + M  + D   W +L+ G  +H   H  L          L+PN   +
Sbjct: 655 NFINEMPITPDAAVWGALLNGCRIHR--HVELGELAAKYVLELEPNDAGY 702


>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
 gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
          Length = 635

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 209/583 (35%), Positives = 321/583 (55%), Gaps = 29/583 (4%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P VF+W  M  G+++       + L+ EM    V P+  T        T   AL +G E+
Sbjct: 77  PSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGREL 136

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H   VK G   +V   N+LINMYS C  ++ A  +FDM    DV +WN+MI+GY      
Sbjct: 137 HCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGY------ 190

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
                       + +  +VI+W  +++G++  G  D A   F +M + D V     SW +
Sbjct: 191 ------------NRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHV-----SWTA 233

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +I GY +L     AL +FR+MQ+S   P+  T++SVL ACA L A    + I   + +  
Sbjct: 234 MIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNK 293

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           +++   V N+LID Y K GN+  + +IF+ +  +D  TW +++ G  ++G    AL++F 
Sbjct: 294 VKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFS 353

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           QM    + P+  T++ ++ A +  GMVD GKK F S+T  + I P I HY  M+DL G++
Sbjct: 354 QMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKA 413

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           G L+EA E I++MP++P+S +W ALL ACRIH + ++A  AIE++ +LEP +  +  L  
Sbjct: 414 GHLKEAHEIIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQC 473

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ 770
            IYA C K +   ++R++  +   + + G   IE+  +V+ FV G  S   +  +Y  L 
Sbjct: 474 NIYAACNKWDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAGDQSHPQTKEIYGKLN 533

Query: 771 NVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNI 825
            +  ++     +  +S   L I EE+KE     HSEKLA+AF LI S     TIRIVKN+
Sbjct: 534 KMTSDLKIAGYSPNTSEVFLDIAEEDKENAVYRHSEKLAIAFGLINSGPGV-TIRIVKNL 592

Query: 826 RMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           RMC+ CH  AK VS ++  E+ + D    HHF++G CSC DYW
Sbjct: 593 RMCIDCHHVAKLVSKVYDREVIVRDRTRFHHFRHGSCSCKDYW 635



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 222/465 (47%), Gaps = 33/465 (7%)

Query: 50  TQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSV--YAKCG 105
           +Q + V  N  ++L + C    S++  +++H+   + T I  +  ++ K+LS     + G
Sbjct: 7   SQSSPVTENPPLSLFETC---KSMYHLKQIHS-RTIKTGIICNPIIQNKILSFCCSREFG 62

Query: 106 CLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQ 165
            +  AR++F+ + E ++++W+ M   YSR    +  V L+  M++  + PD + +P + +
Sbjct: 63  DMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFK 122

Query: 166 ACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA 225
                   + G+ +H  V+K G+       N+++ +Y  CG +  AR  F+   + D V 
Sbjct: 123 GFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVT 182

Query: 226 WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME 285
           WN+MISGY                    IK  V+++  ++  +   GQ D A +   +M 
Sbjct: 183 WNAMISGY------------------NRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMP 224

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
                 D  +WT MI G+ +     +AL LF+EM    + P+  T+ S ++AC  L AL 
Sbjct: 225 ER----DHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALE 280

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
           +G  I +   K    +D  VGN+LI+MY KC  +E A  +F+ +  +D ++W +M+ G  
Sbjct: 281 LGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLA 340

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
             G   +A  +F +M ++ V P+ +T+  ++S     G  DE    F  M     ++ N 
Sbjct: 341 INGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNI 400

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           A +  ++    + G    A  + + M      PN +   ++L AC
Sbjct: 401 AHYGCMVDLLGKAGHLKEAHEIIKNMP---MKPNSIVWGALLGAC 442



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 160/369 (43%), Gaps = 39/369 (10%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DV   T +++ +   G +D AR+ F  M ER+  +W+AMI  Y R   ++E + LF  M 
Sbjct: 196 DVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQ 255

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
              + PD+F    +L AC   G  E G+ + + + K  +     V N+++ +Y KCG + 
Sbjct: 256 TSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVE 315

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A   F ++ ++D   W +M+ G    G  +EA  +F +M +  +    VT+  ++ +  
Sbjct: 316 MALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACT 375

Query: 270 QLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
             G  D   +    M +  GI P++  + CM+    + G   +A ++ K M    + PN 
Sbjct: 376 HTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMP---MKPNS 432

Query: 329 VTITSAISACTDLKALAMG---------MEIHSLAV---------------KMGFTDDVL 364
           +   + + AC   K   M          +E ++ AV               K+     V+
Sbjct: 433 IVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVM 492

Query: 365 V--------GNSLINMYSKCEELEAAERVFDMIKDKDVYS-WNSMIAGYCQAGYCGKAYE 415
           +        G SLI M     E  A ++     + K++Y   N M +    AGY     E
Sbjct: 493 MDRGIKKTPGCSLIEMNGIVHEFVAGDQSHP--QTKEIYGKLNKMTSDLKIAGYSPNTSE 550

Query: 416 LFIKMQESD 424
           +F+ + E D
Sbjct: 551 VFLDIAEED 559



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 111/233 (47%), Gaps = 8/233 (3%)

Query: 34  GNGRLN---EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL-VTEI 89
           G  RLN   EA+ +   + T   K    T +++L AC    ++ L   +  +++    + 
Sbjct: 237 GYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKN 296

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D FV   L+ +Y KCG ++ A  +F  + +R+ +TW+AM+   + +    E + +F  M+
Sbjct: 297 DTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQML 356

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           +  + PD+  +  +L AC + G  + G K   S+  + G+         ++ +  K G L
Sbjct: 357 KASVTPDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHL 416

Query: 209 IWARRFFESMDEK-DGVAWNSMISGYFQIGENDE-AHRLFDKMCREEIKLGVV 259
             A    ++M  K + + W +++ G  +I ++ E A R  +++   E   G V
Sbjct: 417 KEAHEIIKNMPMKPNSIVWGALL-GACRIHKDAEMAERAIEQILELEPNNGAV 468



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 87/178 (48%), Gaps = 9/178 (5%)

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS---GNIVYSRTIFDG 560
           LS+   C  +     +K+IH   ++  +  + P++ + I ++  S   G++ Y+R +FD 
Sbjct: 18  LSLFETCKSMY---HLKQIHSRTIKTGIICN-PIIQNKILSFCCSREFGDMCYARQLFDT 73

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           +    + +WN +  GY         + L+ +M    +KP+  T+  +    + +  + LG
Sbjct: 74  IPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLG 133

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           +++ C + + Y +   +  ++A+I++Y   G ++ A   I DM  + D   W A+++ 
Sbjct: 134 RELHCHVVK-YGLDSNVFAHNALINMYSLCGLIDMA-RGIFDMSCKSDVVTWNAMISG 189


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 252/804 (31%), Positives = 384/804 (47%), Gaps = 129/804 (16%)

Query: 192 RRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR 251
           R +   V+A Y+ CG   +A    E +     V WN +I  + + G  D A  +  +M R
Sbjct: 96  RSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 155

Query: 252 EEIKLGVVTF-----------------------------------NILIRSYNQLGQCDV 276
              +    T                                    N L+  Y++ G  + 
Sbjct: 156 AGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 215

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF-VGVMPNG-----VT 330
           A  +   +   GI  DV +W  ++S   ++     ALDLF +M+  V   P       ++
Sbjct: 216 ASMIFDEITQRGID-DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 274

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
           I + + AC  LKA+    E+H  A++ G   DV VGN+LI+ Y+KC  +E A +VF+M++
Sbjct: 275 IVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMME 334

Query: 391 DKDVYSWNSMIAGYCQ------------------------------AGYCGK-----AYE 415
            KDV SWN+M+AGY Q                              AGY  +     A  
Sbjct: 335 FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 394

Query: 416 LFIKMQESDVPPNVITW-------------------------NVLISGYIQNGNEDE--- 447
           LF +M  S   PN +T                          N L++     G EDE   
Sbjct: 395 LFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLM 454

Query: 448 ----AVDLFQRMGKNDKVK----------RNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
                +D++ +       +          RN  +W  +I G+ Q G  N+AL +F +M S
Sbjct: 455 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 514

Query: 494 SCF--YPNCVTILSVLPACAYLVASNKVKEIHGCVLR--RSLESSLPVMNSLIDTYAKSG 549
             +   PN  TI  +L ACA+L A    K+IH  VLR  R   S+  V N LID Y+K G
Sbjct: 515 EPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCG 574

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
           ++  +R +FD MS K  I+W S++ GY +HG    ALD+FD+M+  G  P+  TFL ++ 
Sbjct: 575 DVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLY 634

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDS 669
           A S  GMVD G   F S++  Y + P  EHY+  IDL  RSG+L++A   ++DMP+EP +
Sbjct: 635 ACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTA 694

Query: 670 SIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLE 729
            +W ALL+ACR+H N++LA  A+ +L ++   +     LI  IYA  G+ +D  ++R L 
Sbjct: 695 VVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLM 754

Query: 730 RENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA-----RSSHSG 784
           +++  +   G  W++ +    +F  G  S   S  +Y+ L+++ + + A      ++ + 
Sbjct: 755 KKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFAL 814

Query: 785 LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
             ++EEEK  +   HSEKLALA+ L+ +S     IRI KN+R+C  CH    Y+S +   
Sbjct: 815 HDVDEEEKNNLLVEHSEKLALAYGLLTTSPGC-PIRITKNLRVCGDCHSAFTYISKIVDH 873

Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
           EI + D    HHFKNG CSCG YW
Sbjct: 874 EIVVRDPSRFHHFKNGSCSCGGYW 897



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 164/638 (25%), Positives = 283/638 (44%), Gaps = 94/638 (14%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           GRL+ AI V   +   G +    T  ++L+AC +  S       H  +     E +VF+ 
Sbjct: 141 GRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFIC 200

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRER---NLYTWSAMIGAYSRDQRWREVVELFFLMV-- 149
             L+++Y++CG L++A  +F+++ +R   ++ +W++++ A+ +       ++LF  M   
Sbjct: 201 NALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLI 260

Query: 150 ----QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
                     D      IL ACG+       K +H   I+ G      V N+++  Y KC
Sbjct: 261 VHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKC 320

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G +  A + F  M+ KD V+WN+M++GY Q G  + A  LF  M +E I L VVT+  +I
Sbjct: 321 GLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVI 380

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             Y+Q G    A+ + ++M   G  P+                                 
Sbjct: 381 AGYSQRGCSHEALNLFRQMIFSGSLPNC-------------------------------- 408

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKM----------GFTDDVLVGNSLINMYSK 375
              VTI S +SAC  L A + G EIH+ ++K           G  +D++V N+LI+MYSK
Sbjct: 409 ---VTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 465

Query: 376 CEELEAAERVFDMI--KDKDVYSWNSMIAGYCQAGYCGKAYELFIKM--QESDVPPNVIT 431
           C   +AA  +FD I  ++++V +W  MI G+ Q G    A +LF++M  +   V PN  T
Sbjct: 466 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 525

Query: 432 WNVL---------------ISGYIQNGNEDEA---------VDLFQRMGKNDKVK----- 462
            + +               I  Y+   +  E+         +D++ + G  D  +     
Sbjct: 526 ISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDS 585

Query: 463 ---RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL-VASNK 518
              ++  SW S++ GY   G+ + AL +F KM+ + F P+ +T L VL AC++  +    
Sbjct: 586 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 645

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS-RTIFDGMSSKDIITWNSLICGYV 577
           +           L          ID  A+SG +  + RT+ D       + W +L+    
Sbjct: 646 LSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACR 705

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
           +H     A    +++     + N G++  I   ++ AG
Sbjct: 706 VHSNVELAEHALNKLVEMNAE-NDGSYTLISNIYATAG 742


>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 245/762 (32%), Positives = 390/762 (51%), Gaps = 64/762 (8%)

Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD 172
           +F      +   +S M+  YSR     +VV LF       L P  F++  +++  G    
Sbjct: 56  IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG---- 111

Query: 173 FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISG 232
            ++G L H+ V+KLG      +RN++L +Y K G++  AR  FE M E+    WNSMISG
Sbjct: 112 -KSGNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISG 170

Query: 233 YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
            ++ G   EA  LF+ M    I    +T+  ++  Y ++G  + A      M        
Sbjct: 171 CWKSGNETEAVVLFNMMPARNI----ITWTSMVTGYAKMGDLESARRYFDEMPE----RS 222

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           V +W  M S +AQ     +AL+LF +M   G+ P+  T    IS+C+ +    +   I  
Sbjct: 223 VVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILR 282

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
           +  +     +  V  +L++M++K   LE A  +FD +  +                    
Sbjct: 283 MIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQR------------------- 323

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                          N +TWN++IS Y + G    A +LF  M K D V     SWNS+I
Sbjct: 324 ---------------NAVTWNIMISAYTRVGKLSLARELFDNMPKRDVV-----SWNSMI 363

Query: 473 AGYQQLGQKNNALGVFRKMQSSC-FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           AGY Q G+   ++ +F++M S     P+ VTI SVL AC ++ A      +   V  +++
Sbjct: 364 AGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNI 423

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
           +  +   NSLI  Y+K G++  +  IF  M ++D++++N+LI G+  +G    A+ L   
Sbjct: 424 KLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLT 483

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           M+  G++P+  T++ ++ A S AG+++ GK VF SI       P ++HY+ M+DL GR+G
Sbjct: 484 MEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAG 538

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
           +L+EA   I+ MP++P + ++ +LL A RIH  + L  LA  +LF+LEP ++    L+  
Sbjct: 539 ELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSN 598

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN 771
           IYA  G+ ED  +VR++ ++   + S G  W+E K  V+ F  G  S   S  +Y  L  
Sbjct: 599 IYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAE 658

Query: 772 VPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIR 826
           +   +      A  S +   +EEEEKEE+ G HSEKLA+ FAL+  S+   TIR+VKN+R
Sbjct: 659 LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALL-ISEVGTTIRVVKNLR 717

Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +C+ CH   K +S +   EI + D+   H F  G CSC DYW
Sbjct: 718 ICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 215/433 (49%), Gaps = 46/433 (10%)

Query: 24  FRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL 83
            R+  LD    NG+++ A  + + +A +        + +++  C  S +   A  L    
Sbjct: 132 IRNAILDMYAKNGQVDLARNLFEQMAERTLA----DWNSMISGCWKSGNETEAVVL---F 184

Query: 84  NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
           N++   ++   T +++ YAK G L+ AR  F++M ER++ +W+AM  AY++ +  +E + 
Sbjct: 185 NMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALN 244

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           LF  M+++G+ PDD  +   + +C + GD      +  ++ +  +     V+ ++L ++ 
Sbjct: 245 LFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHA 304

Query: 204 KCGKLIWARRFFESM-DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
           K G L  AR  F+ +  +++ V WN MIS Y ++G+   A  LFD M + +    VV++N
Sbjct: 305 KFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRD----VVSWN 360

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            +I  Y Q G+  +++E+ K M S           CM                       
Sbjct: 361 SMIAGYAQNGESAMSIELFKEMIS-----------CM----------------------- 386

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
            + P+ VTI S +SAC  + AL +   +  +  +      +   NSLI MYSKC  +  A
Sbjct: 387 DIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADA 446

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
            R+F  +  +DV S+N++I+G+   G+  +A +L + M+E  + P+ +T+  +++     
Sbjct: 447 HRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHA 506

Query: 443 GNEDEAVDLFQRM 455
           G  +E  ++F+ +
Sbjct: 507 GLLNEGKNVFKSI 519


>gi|347954460|gb|AEP33730.1| chlororespiratory reduction 21, partial [Capsella bursa-pastoris]
          Length = 820

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 220/751 (29%), Positives = 395/751 (52%), Gaps = 38/751 (5%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-- 89
           LC NG + EA++++  +  +  ++    Y  +LQ C+    +   +++HA +    ++  
Sbjct: 34  LCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGDLYA 93

Query: 90  -DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            + +++TKL+  YAKC  L+ A  +F  +R RN+++W+A+IG   R       +  F  M
Sbjct: 94  RNEYIETKLVIFYAKCDDLEIAEVLFSKLRVRNVFSWAAIIGVKCRMGLCEGALMGFVEM 153

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           +++ +FPD+F+ P + +ACG       G+ +H  V+K G+     V +S+  +Y KCG L
Sbjct: 154 LENEIFPDNFVVPNVFKACGALQWSRFGRGVHGYVLKAGLEDCVFVASSLADMYGKCGVL 213

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI-LIRS 267
             AR+ F+ + E++ VAWN+++ GY Q G N+EA RL   M ++ ++   VT +  L  S
Sbjct: 214 DDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKDGVEPTRVTVSTCLSAS 273

Query: 268 YNQLG-----QCDVAMEMVKRME---SLGIT-----------------------PDVFTW 296
            N  G     QC  A+ +V  +E    LG +                        DV TW
Sbjct: 274 ANMAGVEEGTQCH-AIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRMFEKDVVTW 332

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             +ISG+ Q G    A+ + + M    +  + VT+ + +SA    + L +G E+     +
Sbjct: 333 NLLISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCXCFR 392

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
                D+++ ++ ++MY+KC  +  A++VFD   +KD+  WN+++A Y ++G+ G+A  L
Sbjct: 393 HSLESDIVLASTAMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGHSGEALRL 452

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F +MQ   VPPNVITWN++I   ++N   +EA ++F +M ++  +  N  SW +++ G  
Sbjct: 453 FYEMQLESVPPNVITWNLIILSRLRNAEVNEAKEMFLQM-QSSGITPNLISWTTMMNGMV 511

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSL 535
           Q G    A+   RKMQ S   PN  +I   L A A L + +  + IHG ++R     SS 
Sbjct: 512 QNGCSEEAIHFLRKMQESGMRPNAFSITVALSASANLASXHFGRSIHGYIIRNLRHSSSA 571

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            +  SL+D YAK G+I  +  +F+   S ++  +N++I  Y L G    A+ L+  ++  
Sbjct: 572 SIETSLVDMYAKCGDINKAERVFESKLSNELPLYNAMISAYALXGNVTEAVALYRSLEDM 631

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           G KP+  TF S++ A + AG +D   +VF  +   + + P +EHY  ++DL+  + + ++
Sbjct: 632 GXKPDSITFTSLLSACNHAGDIDQAIRVFTDMVSNHGVKPCLEHYGLLVDLFASAKETDK 691

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A+  +E+MP +PD  + ++L+ +C      +L      +L + EP        I   YA+
Sbjct: 692 ALRLMEEMPYKPDXRMIQSLVASCNKQHKTELVDYLSRQLLETEPEXSGNYVTISNAYAV 751

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
            G  ++ +K R++ +    +   G  WI++K
Sbjct: 752 EGSWDEVVKTREMMKAKGLKKKPGCSWIQIK 782



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 209/456 (45%), Gaps = 39/456 (8%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            P   ++   +S   +NG   +AL L  EM F  +          +  C   + L  G +
Sbjct: 21  APSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLCTGKQ 80

Query: 350 IHSLAVKMG--FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
           IH+  +K G  +  +  +   L+  Y+KC++LE AE +F  ++ ++V+SW ++I   C+ 
Sbjct: 81  IHARILKNGDLYARNEYIETKLVIFYAKCDDLEIAEVLFSKLRVRNVFSWAAIIGVKCRM 140

Query: 408 GYCGKAYELFIKMQESDV-PPNVITWNVL--------------ISGYI-QNGNED----- 446
           G C  A   F++M E+++ P N +  NV               + GY+ + G ED     
Sbjct: 141 GLCEGALMGFVEMLENEIFPDNFVVPNVFKACGALQWSRFGRGVHGYVLKAGLEDCVFVA 200

Query: 447 -EAVDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
               D++ + G  D  +        RN  +WN+L+ GY Q G    A+ +   M+     
Sbjct: 201 SSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKDGVE 260

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P  VT+ + L A A +    +  + H   +   LE    +  SL++ Y K G I Y+  I
Sbjct: 261 PTRVTVSTCLSASANMAGVEEGTQCHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMI 320

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           FD M  KD++TWN LI GYV  G    A+ +   M+   LK +  T  +++ A +    +
Sbjct: 321 FDRMFEKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENL 380

Query: 618 DLGKKVFCSITECYQ--IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
            LGK+V C    C++  +   I   S  +D+Y + G + +A +   D  +E D  +W  L
Sbjct: 381 KLGKEVQCX---CFRHSLESDIVLASTAMDMYAKCGSIVDAKKVF-DSTVEKDLILWNTL 436

Query: 676 LTACRIHGNIDLAV-LAIERLFDLEPGDVLIQRLIL 710
           L A    G+   A+ L  E   +  P +V+   LI+
Sbjct: 437 LAAYAESGHSGEALRLFYEMQLESVPPNVITWNLII 472



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 2/150 (1%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--N 84
           T ++ +  NG   EAI  L  +   G +    +    L A  +  S H  R +H ++  N
Sbjct: 505 TMMNGMVQNGCSEEAIHFLRKMQESGMRPNAFSITVALSASANLASXHFGRSIHGYIIRN 564

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
           L       ++T L+ +YAKCG ++ A  VFE      L  ++AMI AY+      E V L
Sbjct: 565 LRHSSSASIETSLVDMYAKCGDINKAERVFESKLSNELPLYNAMISAYALXGNVTEAVAL 624

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFE 174
           +  +   G  PD   F  +L AC + GD +
Sbjct: 625 YRSLEDMGXKPDSITFTSLLSACNHAGDID 654


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 217/680 (31%), Positives = 356/680 (52%), Gaps = 49/680 (7%)

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
           + N +L +Y K G++  AR+ F+ M ++D  +WN+M+S Y + G  ++   +FD M    
Sbjct: 60  IHNRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNM---- 115

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
                                               + D  ++  +ISGFA NGR   AL
Sbjct: 116 -----------------------------------PSRDSVSYNTVISGFAGNGRGGPAL 140

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
            +F  M   G+ P   T  S ++ACT L  L  G +IH   +      +V V N+L ++Y
Sbjct: 141 GVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLY 200

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
           ++C E++ A R+FD +  ++V +WN MI+GY +     K  +LF +MQ S++ P+ +T +
Sbjct: 201 ARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTAS 260

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
            ++  YIQ G  DEA  +F  + + D+V      W  +I G  Q G++ +AL +F +M  
Sbjct: 261 SVLGAYIQAGYIDEARKVFGEIREKDEV-----CWTIMIVGCAQNGKEEDALLLFSEMLL 315

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
               P+  TI SV+ +CA L +    + +HG      +   L V ++L+D Y K G    
Sbjct: 316 ENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRD 375

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           + TIF  M ++++++WNS+I GY L+G    AL L++ M    LKP+  TF+ ++ A   
Sbjct: 376 AWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVH 435

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           AG+V+ GK+ FCS+++ + + P  +HY+ M++L+GRSG +++A++ I  M  EP+S IW 
Sbjct: 436 AGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWT 495

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
            +L+ C + G+I    +A   L +L P + +   ++  +YA  G+ +D   +R L +   
Sbjct: 496 TVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSNMYAARGRWKDVASIRSLMKSKH 555

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--TARSSHSGLCIE--- 788
            +      WIE+ N V+ FV    +   + +++  L  +   +     S ++ L +    
Sbjct: 556 VKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQEAGFSPNTNLVLHDFG 615

Query: 789 EEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFL 848
           E+EK E    HSEKLALA+ LI        IRI+KNIR C  CH   K+VS +    + L
Sbjct: 616 EDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIRTCADCHIFMKFVSNITRRPVIL 675

Query: 849 ADSKCLHHFKNGQCSCGDYW 868
            DS   HHF  G+CSC DYW
Sbjct: 676 RDSNRFHHFVEGKCSCKDYW 695



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 270/568 (47%), Gaps = 55/568 (9%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKL--HAFLNLVTEIDVFVK 94
           +L +AI   D++ T G       Y  L   C  ++ +  A++L  H  L+L    D F+ 
Sbjct: 6   KLRQAI---DTLYTNGP-ASHECYTRLALECFRASDVDQAKRLKSHMHLHLFKPNDTFIH 61

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY-----------------SRDQ- 136
            +LL++YAK G +  AR++F++M +R+ ++W+AM+  Y                 SRD  
Sbjct: 62  NRLLNLYAKSGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSV 121

Query: 137 -------------RWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
                        R    + +F  M ++GL P ++    +L AC    D   GK +H  +
Sbjct: 122 SYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRI 181

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
           I   +     V N++  +Y +CG++  ARR F+ M  ++ V WN MISGY +  + ++  
Sbjct: 182 IICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCI 241

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
            LF +M    +K   VT + ++ +Y Q G  D A ++   +       D   WT MI G 
Sbjct: 242 DLFHEMQVSNLKPDQVTASSVLGAYIQAGYIDEARKVFGEIRE----KDEVCWTIMIVGC 297

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
           AQNG+   AL LF EM      P+G TI+S +S+C  L +L  G  +H  A  MG  DD+
Sbjct: 298 AQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGVNDDL 357

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
           LV ++L++MY KC     A  +F  ++ ++V SWNSMI GY   G   +A  L+  M E 
Sbjct: 358 LVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYENMLEE 417

Query: 424 DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
           ++ P+ +T+  ++S  +  G  +E  + F  M     ++     +  ++  + + G  + 
Sbjct: 418 NLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDK 477

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG-----CVLRRSLESSLPVM 538
           A+ +   M      PN +   +VL  C   V    +K  HG     C++  +  +++P +
Sbjct: 478 AVDLISSMSQE---PNSLIWTTVLSVC---VMKGDIK--HGEMAARCLIELNPFNAVPYI 529

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
             L + YA  G      +I   M SK +
Sbjct: 530 -MLSNMYAARGRWKDVASIRSLMKSKHV 556



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 121/529 (22%), Positives = 219/529 (41%), Gaps = 91/529 (17%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +    GNGR   A+ V   +  +G K    T++++L AC     +   +++H  + +
Sbjct: 124 NTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRI-I 182

Query: 86  VTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
           +  +  +VFV   L  +YA+CG +D AR +F+ M  RN+ TW+ MI  Y ++++  + ++
Sbjct: 183 ICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCID 242

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           LF  M    L PD                                       +SVL  Y+
Sbjct: 243 LFHEMQVSNLKPDQV-----------------------------------TASSVLGAYI 267

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           + G +  AR+ F  + EKD V W  MI G  Q G+ ++A  LF +M  E  +    T + 
Sbjct: 268 QAGYIDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISS 327

Query: 264 LIRSYNQL-----GQCD--------------VAMEMVKRMESLGITPDVFT--------- 295
           ++ S  +L     GQ                V+  +V      G+T D +T         
Sbjct: 328 VVSSCAKLASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRN 387

Query: 296 ---WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH- 351
              W  MI G+A NG+  +AL L++ M    + P+ VT    +SAC     +  G E   
Sbjct: 388 VVSWNSMIGGYALNGQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFC 447

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELE-AAERVFDMIKDKDVYSWNSMIAGYCQAG-- 408
           S++ + G          ++N++ +   ++ A + +  M ++ +   W ++++     G  
Sbjct: 448 SMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDI 507

Query: 409 -YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA- 466
            +   A    I++     P N + + +L + Y   G   +   +   M K+  VK+ +A 
Sbjct: 508 KHGEMAARCLIELN----PFNAVPYIMLSNMYAARGRWKDVASIRSLM-KSKHVKKFSAY 562

Query: 467 SWNSLIAGYQQLGQKNNALG-----------VFRKMQSSCFYPNCVTIL 504
           SW  +     +    +               + RK+Q + F PN   +L
Sbjct: 563 SWIEIDNEVHKFVADDRTHPDAKIIHVQLNRLIRKLQEAGFSPNTNLVL 611


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 223/711 (31%), Positives = 367/711 (51%), Gaps = 81/711 (11%)

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           ++ V +  G    AR+ F+++ + D    +++IS     G ++EA +++  +    IK  
Sbjct: 104 LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 163

Query: 258 VVTF-----------------------------------NILIRSYNQLGQCDVAMEMVK 282
           +  F                                   N LI +Y   G+C   +E  +
Sbjct: 164 MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAY---GKCK-CVEGAR 219

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
           R+    +  DV +WT + S + + G   + +D+F+EM + GV PN +T++S + AC +LK
Sbjct: 220 RVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELK 279

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
            L  G EIH  AV+ G   ++ V ++L+++Y+KC  +  A  VFD++  +DV        
Sbjct: 280 DLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDV-------- 331

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                      ++WN +++ Y +N   ++   LF +M + D V+
Sbjct: 332 ---------------------------VSWNGVLTAYFKNKEYEKGFSLFLKMSR-DGVR 363

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
            + A+WN++I G  + G+   A+ +FRKMQ   F PN +TI S+LPAC++       KEI
Sbjct: 364 ADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEI 423

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           H  V R      L    +L+  YAK G++  SR +FD M  KD++ WN++I    +HG  
Sbjct: 424 HCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNG 483

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
             AL LFD+M    ++PN  TF  ++   S + +V+ G ++F S+   + + P   HYS 
Sbjct: 484 KEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSC 543

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           ++D+Y R+G+L EA +FI+ MP+EP +S W ALL ACR++ N++LA ++ ++LF++EP +
Sbjct: 544 VVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNN 603

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYS 762
                 +  I        +A +VR L +E     + G  W++V N V+TFV G  S   S
Sbjct: 604 PGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIES 663

Query: 763 DLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
           D +Y++L  + E +        + +    I++EEK E    HSEKLA+AF ++ +     
Sbjct: 664 DKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGIL-NLNGQS 722

Query: 818 TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           TIR+ KN+R+C  CH   KY+S +    I + DS   HHFKNG CSC D W
Sbjct: 723 TIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 773



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 242/493 (49%), Gaps = 39/493 (7%)

Query: 19  KSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARK 78
           + +P    T +  L  +G  NEAI +  S+  +G K     ++   +AC  S      ++
Sbjct: 126 QPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKE 185

Query: 79  LHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 137
           +H        + DVFV   L+  Y KC C++ AR VF+D+  R++ +W+++   Y +   
Sbjct: 186 VHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGF 245

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
            R+ +++F  M   G+ P+      IL AC    D ++GK +H   ++ GM     V ++
Sbjct: 246 PRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSA 305

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           ++++Y KC  +  AR  F+ M  +D V+WN +++ YF+  E ++   LF KM R+ ++  
Sbjct: 306 LVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRAD 365

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
             T+N +I    + G+ + A+EM ++M+ +G                           FK
Sbjct: 366 EATWNAVIGGCMENGRSEEAVEMFRKMQKMG---------------------------FK 398

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
                   PN +TI+S + AC+  + L MG EIH    +     D+    +L+ MY+KC 
Sbjct: 399 --------PNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCG 450

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           +L  +  VFDM++ KDV +WN+MI      G   +A  LF KM  S V PN +T+  ++S
Sbjct: 451 DLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLS 510

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
           G   +   +E V +F  MG++  V+ +   ++ ++  Y + G+ N A   ++ +Q     
Sbjct: 511 GCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEA---YKFIQGMPME 567

Query: 498 PNCVTILSVLPAC 510
           P      ++L AC
Sbjct: 568 PTASAWGALLAAC 580


>gi|297796091|ref|XP_002865930.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311765|gb|EFH42189.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 878

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 242/852 (28%), Positives = 418/852 (49%), Gaps = 87/852 (10%)

Query: 56  RRNTYINLLQACI------DSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGC 106
           R N   NL Q+CI      +S+S  +   +H  +    L+  +D+     LLS+Y K   
Sbjct: 15  RTNELSNLQQSCIRILSFCESSSSRIGLHIHCPVIKFGLLENLDLC--NNLLSLYLKTDG 72

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           + +AR++F++M +R ++ W+ MI A+++ Q +   + LF  M+  G+ P++F F  ++++
Sbjct: 73  IWNARKLFDEMPQRTVFAWTVMISAFTKSQEFASALSLFEEMMASGIHPNEFTFSSVIRS 132

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C   GD   G  +H  V+K G      V +S+  +Y KCGKL  AR  F S+   D ++W
Sbjct: 133 CAGLGDLSYGGRVHGSVLKTGFEGNSVVGSSLTDLYSKCGKLKEARELFSSLQNADTISW 192

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG-------------- 272
             MIS      +  EA R + +M +  +     TF  L+ + + LG              
Sbjct: 193 TMMISSLVGARKWSEALRFYSEMIKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSSIIVR 252

Query: 273 -----------------QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
                               +  + V+ + S G   DVF WT ++SGF +N R  +A+  
Sbjct: 253 GIPLNVVLKTSLVYFYSHFSIMEDAVRVLNSTG-EQDVFLWTSVVSGFVRNLRAKEAVGT 311

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           F EM  +G+ PN  T ++ +S C+ +++L +G +IHS  +K+GF D   VGN+L++MY K
Sbjct: 312 FLEMRSLGLHPNNFTYSAILSLCSAVRSLDLGKQIHSQTIKVGFEDSTDVGNALVSMYMK 371

Query: 376 CEELEA-AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           C   E  A RVF  +   +V SW ++I G    G+    + L ++M + +V PN +T + 
Sbjct: 372 CSASEVEASRVFGAMISPNVVSWTTLILGLVDHGFEQDCFGLLMEMVKREVEPNFVTLSG 431

Query: 435 L---------------ISGYIQNGNED-------EAVDLFQRMGKNDKV--------KRN 464
           +               I GY+   + D         VD +   GK D           R+
Sbjct: 432 VLRACSKLKYLRLVLEIHGYLLRRHVDGEMIVGNSLVDAYASSGKVDYAWNVTRSMDMRD 491

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             ++ SL+  + +LG+   AL V   M       + +++   + A A L A    K +H 
Sbjct: 492 NITYTSLVTRFNELGKHEMALSVINHMYGDGIRMDQLSLPGFISASANLGAHETGKHLHC 551

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
             ++     ++ V+NSL+D Y+K G++  ++ +F+ ++  D+++WN L+ G    G   +
Sbjct: 552 YSVKSGFSGAVSVLNSLVDMYSKCGSLEDAKKVFEEIAMPDVVSWNGLVSGLASIGRISS 611

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMI 644
           AL  F++M+  G +P+  TFL ++ A S   + ++G + F S+   + + P IEHY  ++
Sbjct: 612 ALSAFEEMRMKGTEPDSVTFLILLSACSKGRLTEMGLEYFQSMKTIHNMEPQIEHYVHLV 671

Query: 645 DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVL 704
            + GR+G+LEEA   +E M ++P++ I++ LL ACR HGN+ L      +   L P D  
Sbjct: 672 GILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYHGNLSLGEDMANKGLALAPSDPA 731

Query: 705 IQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG-WSESYSD 763
              L+  +Y   GKPE A K R L  E        +  +EV+  V++FV     +   + 
Sbjct: 732 FYILLADLYDESGKPELAQKTRNLMSEKGLCKKLSKSTVEVQGKVHSFVGEDVITVEKTK 791

Query: 764 LLYSWLQNVPENVTA-RSSHSGLCIEEEEKEEISGIHSEKLALAFALI-GSSQAPHTIRI 821
            +Y+ ++++ E +    SS+ G         E +  HS K A+ +  I  S +AP  + +
Sbjct: 792 RIYAEIESIKEEIKRFGSSYRG--------NENASFHSAKQAVVYGFIYASPEAP--VHV 841

Query: 822 VKNIRMCVHCHE 833
           VKN  +C  CH+
Sbjct: 842 VKNKILCKDCHD 853



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 150/352 (42%), Gaps = 41/352 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           N R  EA+     + + G      TY  +L  C    S+ L +++H+  + +  E    V
Sbjct: 302 NLRAKEAVGTFLEMRSLGLHPNNFTYSAILSLCSAVRSLDLGKQIHSQTIKVGFEDSTDV 361

Query: 94  KTKLLSVYAKCGCLD-DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              L+S+Y KC   + +A  VF  M   N+ +W+ +I         ++   L   MV+  
Sbjct: 362 GNALVSMYMKCSASEVEASRVFGAMISPNVVSWTTLILGLVDHGFEQDCFGLLMEMVKRE 421

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P+      +L+AC           +H  +++  +     V NS++  Y   GK+ +A 
Sbjct: 422 VEPNFVTLSGVLRACSKLKYLRLVLEIHGYLLRRHVDGEMIVGNSLVDAYASSGKVDYAW 481

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL---------------- 256
               SMD +D + + S+++ + ++G+++ A  + + M  + I++                
Sbjct: 482 NVTRSMDMRDNITYTSLVTRFNELGKHEMALSVINHMYGDGIRMDQLSLPGFISASANLG 541

Query: 257 -------------------GVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                               V   N L+  Y++ G  + A ++ + +      PDV +W 
Sbjct: 542 AHETGKHLHCYSVKSGFSGAVSVLNSLVDMYSKCGSLEDAKKVFEEIA----MPDVVSWN 597

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            ++SG A  GR S AL  F+EM   G  P+ VT    +SAC+  +   MG+E
Sbjct: 598 GLVSGLASIGRISSALSAFEEMRMKGTEPDSVTFLILLSACSKGRLTEMGLE 649


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 245/751 (32%), Positives = 363/751 (48%), Gaps = 118/751 (15%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N+++  Y   G+L  AR+ F     +  + W+S+ISGY + G + EA  LF +M  E  +
Sbjct: 76  NTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGER 135

Query: 256 ---------LGVVTFNILIRSYNQL-----------------------GQCDVAMEMVKR 283
                    L V +  +L+    Q+                        +C   +E    
Sbjct: 136 PNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYL 195

Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
            E      +   WT M++G++QNG   +A++ F++M   G+  N  T  S ++AC  + A
Sbjct: 196 FELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISA 255

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
              G ++H   V+ GF  +V VG++L++MYSKC +L  A R+ + ++  D  SWNSMI G
Sbjct: 256 CGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVG 315

Query: 404 YCQAGYCGKAYELF-------IKMQESDVPP--NVITW---------------------- 432
             + G   +A  LF       +K+ E   P   N  ++                      
Sbjct: 316 CVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAY 375

Query: 433 ----NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
               N L+  Y + G  D A D+F++M   D +     SW SL+ G    G    AL +F
Sbjct: 376 KLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVI-----SWTSLVTGCVHNGSYEEALRLF 430

Query: 489 RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
            +M+    +P+ + I +VL ACA L      K++H   L+  L SSL V NSL+  YAK 
Sbjct: 431 CEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKC 490

Query: 549 GNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
           G I  +  +FD M  +D+ITW +LI GY  +G                    RG      
Sbjct: 491 GCIEDANKVFDSMEIQDVITWTALIVGYAQNG--------------------RG------ 524

Query: 609 LAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
                AG+V+ G+  F S+ E Y I P  EHY+ MIDL GRSGKL EA E +  M ++PD
Sbjct: 525 --RDHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPD 582

Query: 669 SSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKL 728
           +++W+ALL ACR+HGN++L   A   LF+LEP + +   L+  +Y+  GK E+A K R+L
Sbjct: 583 ATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRL 642

Query: 729 ERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPENVTA 778
            +        G  WIE+ + V+ F++   S   +  +YS +            VP+   A
Sbjct: 643 MKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFA 702

Query: 779 RSSHSGLCIEEEEKEEISGIHSEKLALAFALIG-SSQAPHTIRIVKNIRMCVHCHETAKY 837
                   ++EE KE     HSEKLA+AF L+     AP  IRI KN+R+C  CH   KY
Sbjct: 703 LHD-----MDEEGKELGLAYHSEKLAVAFGLLTMPPGAP--IRIFKNLRICGDCHTAMKY 755

Query: 838 VSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           VS + H  + L DS C HHF+ G CSC DYW
Sbjct: 756 VSGVFHRHVILRDSNCFHHFREGACSCSDYW 786



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 240/493 (48%), Gaps = 60/493 (12%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VFVKTKL 97
           EA+ +   +  +G +  + T+ ++L+ C     +   +++HA   + T+ D   FV T L
Sbjct: 121 EALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHA-IKTQFDSNAFVVTGL 179

Query: 98  LSVYAKCGCLDDAREVFE-DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           + +YAKC C+ +A  +FE    +RN   W+AM+  YS++    + +E F  M  +G+  +
Sbjct: 180 VDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECN 239

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            F FP IL ACG+      G  +H  +++ G      V ++++ +Y KCG L  ARR  E
Sbjct: 240 QFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLE 299

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------------- 261
           +M+  D V+WNSMI G  + G  +EA  LF  M    +K+   T+               
Sbjct: 300 TMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRN 359

Query: 262 --------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                               N L+  Y + G  D A ++ ++M       DV +WT +++
Sbjct: 360 AMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKM----TDKDVISWTSLVT 415

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
           G   NG   +AL LF EM  +G+ P+ + I + +SAC +L  L  G ++H+  +K G   
Sbjct: 416 GCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGS 475

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ-------AGYCGKAY 414
            + V NSL++MY+KC  +E A +VFD ++ +DV +W ++I GY Q       AG      
Sbjct: 476 SLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGLVEHGR 535

Query: 415 ELFIKMQE-SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
             F  M+E   + P    +  +I    ++G   EA +L  +M     V+ +   W +L+A
Sbjct: 536 SYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMA----VQPDATVWKALLA 591

Query: 474 -----GYQQLGQK 481
                G  +LG++
Sbjct: 592 ACRVHGNVELGER 604



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 145/548 (26%), Positives = 252/548 (45%), Gaps = 84/548 (15%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N VL+   KCG++  AR+ F+ M ++D  +WN+MI  Y   G  +EA +LF     E   
Sbjct: 45  NWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLF----YETPI 100

Query: 256 LGVVTFNILIRSYNQLGQCDV-AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
              +T++ LI  Y + G CDV A+E+   M+  G  P+ FTW                  
Sbjct: 101 RSCITWSSLISGYCRYG-CDVEALELFWEMQYEGERPNQFTW------------------ 141

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
                             S +  C+    L  G +IH+ A+K  F  +  V   L++MY+
Sbjct: 142 -----------------GSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYA 184

Query: 375 KCEELEAAERVFDMIKDKDVYS-WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
           KC+ +  AE +F++  DK  +  W +M+ GY Q G   KA E F  M+   +  N  T+ 
Sbjct: 185 KCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFP 244

Query: 434 VLI---------------------SGYIQNGNEDEA-VDLFQRMGKNDKVKR-------- 463
            ++                     SG+  N     A VD++ + G     +R        
Sbjct: 245 SILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVD 304

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           +  SWNS+I G  + G    AL +FR M       +  T  SVL   ++++       +H
Sbjct: 305 DPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVH 364

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
             +++   E+   V N+L+D YAK G   Y+  +F+ M+ KD+I+W SL+ G V +G + 
Sbjct: 365 SLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYE 424

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            AL LF +M+  G+ P++    +++ A +   +++ GK+V  +  +   +   +   +++
Sbjct: 425 EALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKS-GLGSSLSVDNSL 483

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG-NIDLAVL---------AIE 693
           + +Y + G +E+A +  + M I+ D   W AL+     +G   D A L         ++E
Sbjct: 484 VSMYAKCGCIEDANKVFDSMEIQ-DVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSME 542

Query: 694 RLFDLEPG 701
            ++ ++PG
Sbjct: 543 EVYGIKPG 550



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 142/577 (24%), Positives = 243/577 (42%), Gaps = 111/577 (19%)

Query: 76  ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           ARKL    +++ + D      ++  YA  G L++AR++F +   R+  TWS++I  Y R 
Sbjct: 60  ARKL---FDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRY 116

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
               E +ELF+ M  +G  P+ F +  +L+ C      E GK +H+  IK        V 
Sbjct: 117 GCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVV 176

Query: 196 NSVLAVYVKCGKLIWARRFFE-SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
             ++ +Y KC  ++ A   FE + D+++ V W +M++GY Q G+  +A   F  M  E I
Sbjct: 177 TGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGI 236

Query: 255 KLGVVTF------------------------------NILIRS-----YNQLGQCDVAME 279
           +    TF                              N+ + S     Y++ G    A  
Sbjct: 237 ECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARR 296

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           M++ ME      D  +W  MI G  + G   +AL LF+ M    +  +  T  S ++  +
Sbjct: 297 MLETME----VDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFS 352

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
            +  +   M +HSL VK GF    LV N+L++MY+K    + A  VF+ + DKDV SW S
Sbjct: 353 FVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTS 412

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------------------------- 432
           ++ G    G   +A  LF +M+   + P+ I                             
Sbjct: 413 LVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSG 472

Query: 433 --------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
                   N L+S Y + G  ++A  +F  M   D +     +W +LI GY Q G+  + 
Sbjct: 473 LGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVI-----TWTALIVGYAQNGRGRDH 527

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
            G+    +S  ++ +   +  + P            E + C               +ID 
Sbjct: 528 AGLVEHGRS--YFQSMEEVYGIKPG----------PEHYAC---------------MIDL 560

Query: 545 YAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLHG 580
             +SG ++ ++ + + M+ + D   W +L+    +HG
Sbjct: 561 LGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHG 597



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 159/355 (44%), Gaps = 47/355 (13%)

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           T +   C  L+   +   I       G        N +++  SKC  ++ A ++FD++ D
Sbjct: 10  TFSRKVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPD 69

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP-PNVITWNVLISGYIQNGNEDEAVD 450
           +D  SWN+MI  Y  +G   +A +LF      + P  + ITW+ LISGY + G + EA++
Sbjct: 70  RDECSWNTMIGAYANSGRLNEARKLFY-----ETPIRSCITWSSLISGYCRYGCDVEALE 124

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           LF  M                    Q  G++                PN  T  SVL  C
Sbjct: 125 LFWEM--------------------QYEGER----------------PNQFTWGSVLRVC 148

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD-GMSSKDIITW 569
           +  V   K K+IH   ++   +S+  V+  L+D YAK   I+ +  +F+     ++ + W
Sbjct: 149 SMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLW 208

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF-CSIT 628
            +++ GY  +G  H A++ F  M+  G++ N+ TF SI+ A         G +V  C + 
Sbjct: 209 TAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVR 268

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
             +     +   SA++D+Y + G L  A   +E M ++ D   W +++  C   G
Sbjct: 269 SGFGANVFVG--SALVDMYSKCGDLSNARRMLETMEVD-DPVSWNSMIVGCVRQG 320


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 225/672 (33%), Positives = 358/672 (53%), Gaps = 51/672 (7%)

Query: 236 IGENDEAHRLFDKMCREEIKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
           +GE   AH          IKLG    V T N L+  Y +LG    A  +   M +     
Sbjct: 136 LGEGRAAHAAV-------IKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPAR---- 184

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMS-FVGVMPNGVTITSAISACTDLKALAMGMEI 350
           D+ +W  M+ G+  NG  + AL  F+EM+  + V  + V + +A++AC    ALA+G EI
Sbjct: 185 DIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREI 244

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H  A++ G   DV VG SL++MY KC  +  AE VF  +  + V +WN MI GY      
Sbjct: 245 HGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERP 304

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGN----------------------EDEA 448
             A++ F++M+       V+T   L++   Q  +                      E   
Sbjct: 305 VDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETAL 364

Query: 449 VDLFQRMGK---NDKV-----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           ++++ ++GK   ++K+      +   SWN++IA Y  +     A+ +F ++ +   YP+ 
Sbjct: 365 LEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDY 424

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
            T+ +V+PA   L +  + K++H  +++     S  +MN+++  YA+ GNIV SR IFD 
Sbjct: 425 FTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDK 484

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           M  KD+I+WN++I GY +HG    AL++FD+MK  G++PN  TF+S++ A S++G+   G
Sbjct: 485 MPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEG 544

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
            K F S+ + Y +IP IEHY  M DL GR+G+L E + FIE+MPI P S IW +LLTA R
Sbjct: 545 WKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASR 604

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
              +ID+A  A ER+F LE  +     ++  +YA  G+ ED  ++R L +E   R +  +
Sbjct: 605 NKNDIDIAEYAAERIFQLEHNNTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEAR 664

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSW----LQNVPENVTARSSHSGLCIEEEEKEEIS 796
             +E+ N   +FV G  S   S+ ++ +     +N+ E++ + S+             + 
Sbjct: 665 SLVELNNKECSFVNGDMSHPQSEKIHEFSDILSRNIGEDLDSSSNLRDSDPFASSTTVLP 724

Query: 797 GIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHH 856
             HS +LA+AF LI SS+A   + + KN+R+C HCH   K +S     +I + D+K  H 
Sbjct: 725 NKHSVRLAVAFGLI-SSEAGSPVLVKKNVRVCNHCHHALKLISKYSGRKIVVGDTKIYHI 783

Query: 857 FKNGQCSCGDYW 868
           F +G C CGDYW
Sbjct: 784 FSDGSCCCGDYW 795



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 206/489 (42%), Gaps = 81/489 (16%)

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           K+ +LS +   G +D+A + F  +     +  + MI  ++      + +  +  M+  G 
Sbjct: 58  KSLILS-HVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGA 116

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD F FP +L+ C   G    G+  H+ VIKLG+       NS++A+Y K G +  A R
Sbjct: 117 RPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAER 176

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------------ 249
            F+ M  +D V+WN+M+ GY   G    A   F +M                        
Sbjct: 177 VFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLES 236

Query: 250 ------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                        R  ++  V     L+  Y + G    A  +  +M        V TW 
Sbjct: 237 ALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMP----LRTVVTWN 292

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           CMI G+A N R   A D F +M   G     VT  + ++AC   ++   G  +H+  V+ 
Sbjct: 293 CMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRR 352

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            F   V++  +L+ MY K  ++E++E++F  I DK + SWN+MIA Y       +A  LF
Sbjct: 353 HFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALF 412

Query: 418 IKMQESDVPPNVITWNVLISG-----------------------------------YIQN 442
           +++    + P+  T   ++                                     Y + 
Sbjct: 413 LELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARC 472

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           GN   + ++F +M   D +     SWN++I GY   GQ   AL +F +M+ S   PN  T
Sbjct: 473 GNIVASREIFDKMPGKDVI-----SWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNEST 527

Query: 503 ILSVLPACA 511
            +SVL AC+
Sbjct: 528 FVSVLTACS 536



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 206/450 (45%), Gaps = 35/450 (7%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL 98
           +A+    ++   GA+  R T+  +L+ C  + ++   R  HA  + L    DV+    L+
Sbjct: 103 DALAAYRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLV 162

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL--FPD 156
           ++YAK G + DA  VF+ M  R++ +W+ M+  Y  +      +  F  M  D L    D
Sbjct: 163 ALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREM-NDALQVGHD 221

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
                  L AC        G+ +H   I+ G+    +V  S++ +Y KCG + +A   F 
Sbjct: 222 SVGVIAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFA 281

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ-----L 271
            M  +  V WN MI GY       +A   F +M  +  ++ VVT   L+ +  Q      
Sbjct: 282 KMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLF 341

Query: 272 GQCDVA-----------------MEMVKRMESLGITPDVF---------TWTCMISGFAQ 305
           G+   A                 +EM  ++  +  +  +F         +W  MI+ +  
Sbjct: 342 GRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMY 401

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
                +A+ LF E+    + P+  T+T+ + A   L ++    ++HS  VK+G+ D  L+
Sbjct: 402 MEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLI 461

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
            N++++MY++C  + A+  +FD +  KDV SWN++I GY   G    A E+F +M+ S +
Sbjct: 462 MNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGM 521

Query: 426 PPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
            PN  T+  +++    +G E E    F  M
Sbjct: 522 EPNESTFVSVLTACSVSGLEAEGWKEFNSM 551



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 140/287 (48%), Gaps = 2/287 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFV 93
           N R  +A      +   G +V   T INLL AC  + S    R +HA++     +  V +
Sbjct: 301 NERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVL 360

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           +T LL +Y K G ++ + ++F  + ++ L +W+ MI AY   + ++E + LF  ++   L
Sbjct: 361 ETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPL 420

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           +PD F    ++ A    G     K MHS ++KLG      + N+V+ +Y +CG ++ +R 
Sbjct: 421 YPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASRE 480

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG- 272
            F+ M  KD ++WN++I GY   G+   A  +FD+M    ++    TF  ++ + +  G 
Sbjct: 481 IFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGL 540

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           + +   E     +  G+ P +  + CM     + G   + L   + M
Sbjct: 541 EAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIENM 587



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 159/360 (44%), Gaps = 33/360 (9%)

Query: 61  INLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
           I  L AC   +++ L R++H + +    E DV V T L+ +Y KCG +  A  VF  M  
Sbjct: 226 IAALAACCLESALALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPL 285

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           R + TW+ MIG Y+ ++R  +  + F  M  DG   +      +L AC        G+ +
Sbjct: 286 RTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSV 345

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H+ V++        +  ++L +Y K GK+  + + F  + +K  V+WN+MI+ Y  +   
Sbjct: 346 HAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQITDKTLVSWNNMIAAYMYMEMY 405

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG---QC-------------------DVA 277
            EA  LF ++  + +     T   ++ ++  LG   QC                   +  
Sbjct: 406 QEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHSYIVKLGYGDSTLIMNAV 465

Query: 278 MEMVKR-------MESLGITP--DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
           M M  R        E     P  DV +W  +I G+A +G+   AL++F EM   G+ PN 
Sbjct: 466 MHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKIALEMFDEMKCSGMEPNE 525

Query: 329 VTITSAISACTDLKALAMG-MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            T  S ++AC+     A G  E +S+  + G    +     + ++  +  EL    R  +
Sbjct: 526 STFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYGCMTDLLGRAGELREVLRFIE 585



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 15/236 (6%)

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           LI  ++  G  DEA D F  + +      N      +I G+       +AL  +R M  +
Sbjct: 60  LILSHVAAGRMDEAADAFAGVTRPGAFLHNV-----MIRGFADADLPLDALAAYRAMLDA 114

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              P+  T   VL  CA   A  + +  H  V++  L + +   NSL+  YAK G +  +
Sbjct: 115 GARPDRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDA 174

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK-SFGLKPNRGTFLSIILAHSL 613
             +FDGM ++DI++WN+++ GYV +G    AL  F +M  +  +  +    ++ + A  L
Sbjct: 175 ERVFDGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCL 234

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEH----YSAMIDLYGRSGKLEEAMEFIEDMPI 665
              + LG+++       Y I   +E      ++++D+Y + G +  A      MP+
Sbjct: 235 ESALALGREI-----HGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPL 285


>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
 gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
          Length = 642

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 208/591 (35%), Positives = 325/591 (54%), Gaps = 27/591 (4%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV-MPNGVTITSAISACTDLKALAMGM 348
            PDVF +  +I G + +   S AL LF EM    V +P+  +    + A  + +AL  G+
Sbjct: 67  NPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGL 126

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           ++H LAV  G    + VG +LI+MY++C  L  A +VFD + + ++ +WN+++A   +  
Sbjct: 127 QLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCE 186

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
               A ++F  M       N+ +WN++++GY + G    A ++F +M   D V     SW
Sbjct: 187 GVKDAEQVFRCMPIR----NLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDV-----SW 237

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           +++I G+   G  N+A   FR+++     PN V++  VL ACA   A    + +HG V +
Sbjct: 238 STMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEK 297

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
                 + V N+LIDTY+K GN+  +R +FD M  +  ++W ++I G  +HG+   A+ L
Sbjct: 298 SGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRL 357

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F++M+   +KP+  TF+SI+ A S AG+VDLG   F  +   Y I P+IEHY  M+DLYG
Sbjct: 358 FNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYG 417

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+GKL++A +F+  MPI P+  +W  LL AC IHGN+ LA     +L +L+P +     L
Sbjct: 418 RAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDHVL 477

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  IYA+ GK +D   +R+       + + G   IEV  ++Y+FV G   E  +D+    
Sbjct: 478 LSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYSFVAG---EKQNDIAVEA 534

Query: 769 LQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAP--H 817
            Q + E ++      G           IE EEKE+    HSEKLA+AF   G ++ P   
Sbjct: 535 HQKLREIMSRLRIEGGYVPEVGSVLHDIEVEEKEDSVSQHSEKLAVAF---GMAKLPRGR 591

Query: 818 TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            IR+VKN+R+C  CH   K +S ++  EI + D    H F +G CSC DYW
Sbjct: 592 AIRVVKNLRICRDCHTVMKLISKVYEVEIVVRDRSRFHSFTHGSCSCRDYW 642



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 204/406 (50%), Gaps = 12/406 (2%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL-FPDDFLFPKILQ 165
           L  AR +F D+R  +++ ++ +I   S        ++LF  M +  +  PD F F  +L+
Sbjct: 55  LHYARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLK 114

Query: 166 ACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA 225
           A  NC     G  +H L +  G+     V  +++++Y +C  L++AR+ F+ M E + VA
Sbjct: 115 AAANCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVA 174

Query: 226 WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME 285
           WN++++  F+     +A ++F  M    I+  + ++NI++  Y + G+  +A E+  +M 
Sbjct: 175 WNAIVAACFRCEGVKDAEQVFRCM---PIR-NLTSWNIMLAGYTKAGELQLAREVFMKMP 230

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
                 D  +W+ MI GFA NG  + A   F+E+   G+ PN V++T  +SAC    A  
Sbjct: 231 ----LKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFE 286

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
            G  +H    K GF   + V N+LI+ YSKC  L+ A  VFD +  +   SW +MIAG  
Sbjct: 287 FGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMA 346

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
             GY  +A  LF +M+ES++ P+ IT+  ++      G  D     F RM     ++   
Sbjct: 347 MHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVI 406

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
             +  ++  Y + G+   A     +M  S   PN +   ++L AC+
Sbjct: 407 EHYGCMVDLYGRAGKLQQAYDFVCQMPIS---PNDIVWRTLLGACS 449



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 126/244 (51%), Gaps = 4/244 (1%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           +L+ Y K G L  AREVF  M  ++  +WS MI  ++ +  + +    F  + ++G+ P+
Sbjct: 209 MLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPN 268

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           +     +L AC   G FE G+++H  V K G   +  V N+++  Y KCG L  AR  F+
Sbjct: 269 EVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFD 328

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
           +M  +  V+W +MI+G    G  +EA RLF++M    IK   +TF  ++ + +  G  D+
Sbjct: 329 NMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDL 388

Query: 277 AMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
                 RM  + GI P +  + CM+  + + G+  QA D   +M    + PN +   + +
Sbjct: 389 GCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMP---ISPNDIVWRTLL 445

Query: 336 SACT 339
            AC+
Sbjct: 446 GACS 449



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 3/201 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF-V 93
           NG  N+A      +  +G +    +   +L AC  + +    R LH F+     + +  V
Sbjct: 247 NGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISV 306

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+  Y+KCG LD AR VF++M  R+  +W+AMI   +      E + LF  M +  +
Sbjct: 307 NNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEMEESNI 366

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  IL AC + G  + G      +V   G+  V      ++ +Y + GKL  A 
Sbjct: 367 KPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDLYGRAGKLQQAY 426

Query: 213 RFFESMD-EKDGVAWNSMISG 232
            F   M    + + W +++  
Sbjct: 427 DFVCQMPISPNDIVWRTLLGA 447


>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 244/762 (32%), Positives = 390/762 (51%), Gaps = 64/762 (8%)

Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD 172
           +F      +   +S M+  YSR     +VV LF       L P  F++  +++  G    
Sbjct: 56  IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAG---- 111

Query: 173 FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISG 232
            ++G + H+ V+KLG      +RN++L +Y K G++  AR  FE M E+    WNSMISG
Sbjct: 112 -KSGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISG 170

Query: 233 YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
            ++ G   EA  LF+ M    I    +T+  ++  Y ++G  + A      M        
Sbjct: 171 CWKSGNETEAVVLFNMMPARNI----ITWTSMVTGYAKMGDLESARRYFDEMPE----RS 222

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           V +W  M S +AQ     +AL+LF +M   G+ P+  T    IS+C+ +    +   I  
Sbjct: 223 VVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILR 282

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
           +  +     +  V  +L++M++K   LE A  +FD +  +                    
Sbjct: 283 MIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQR------------------- 323

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                          N +TWN++IS Y + G    A +LF  M K D V     SWNS+I
Sbjct: 324 ---------------NAVTWNIMISAYTRVGKLSLARELFDNMPKRDVV-----SWNSMI 363

Query: 473 AGYQQLGQKNNALGVFRKMQSSC-FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           AGY Q G+   ++ +F++M S     P+ VTI SVL AC ++ A      +   V  +++
Sbjct: 364 AGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNI 423

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
           +  +   NSLI  Y+K G++  +  IF  M ++D++++N+LI G+  +G    A+ L   
Sbjct: 424 KLGISGFNSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLT 483

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           M+  G++P+  T++ ++ A S AG+++ GK VF SI       P ++HY+ M+DL GR+G
Sbjct: 484 MEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA-----PTVDHYACMVDLLGRAG 538

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
           +L+EA   I+ MP++P + ++ +LL A RIH  + L  LA  +LF+LEP ++    L+  
Sbjct: 539 ELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASKLFELEPQNLGNYVLLSN 598

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN 771
           IYA  G+ ED  +VR++ ++   + S G  W+E K  V+ F  G  S   S  +Y  L  
Sbjct: 599 IYASFGRWEDVKRVREMMKKGGLKKSVGMSWVEYKGQVHKFTVGDRSHEQSKDIYKLLAE 658

Query: 772 VPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIR 826
           +   +      A  S +   +EEEEKEE+ G HSEKLA+ FAL+  S+   TIR+VKN+R
Sbjct: 659 LERKMKRVGFVADKSCALRDVEEEEKEEMLGTHSEKLAICFALL-ISEVGTTIRVVKNLR 717

Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +C+ CH   K +S +   EI + D+   H F  G CSC DYW
Sbjct: 718 ICLDCHTAIKMISKLEGREIVVRDNNRFHCFSEGMCSCHDYW 759



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 215/433 (49%), Gaps = 46/433 (10%)

Query: 24  FRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL 83
            R+  LD    NG+++ A  + + +A +        + +++  C  S +   A  L    
Sbjct: 132 IRNAILDMYAKNGQVDLARNLFEQMAERTLA----DWNSMISGCWKSGNETEAVVL---F 184

Query: 84  NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
           N++   ++   T +++ YAK G L+ AR  F++M ER++ +W+AM  AY++ +  +E + 
Sbjct: 185 NMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNAMQSAYAQKECPKEALN 244

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           LF  M+++G+ PDD  +   + +C + GD      +  ++ +  +     V+ ++L ++ 
Sbjct: 245 LFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKHIVLNSFVKTALLDMHA 304

Query: 204 KCGKLIWARRFFESM-DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
           K G L  AR  F+ +  +++ V WN MIS Y ++G+   A  LFD M + +    VV++N
Sbjct: 305 KFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNMPKRD----VVSWN 360

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            +I  Y Q G+  +++E+ K M S           CM                       
Sbjct: 361 SMIAGYAQNGESAMSIELFKEMIS-----------CM----------------------- 386

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
            + P+ VTI S +SAC  + AL +   +  +  +      +   NSLI MYSKC  +  A
Sbjct: 387 DIQPDEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADA 446

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
            R+F  +  +DV S+N++I+G+   G+  +A +L + M+E  + P+ +T+  +++     
Sbjct: 447 HRIFQTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHA 506

Query: 443 GNEDEAVDLFQRM 455
           G  +E  ++F+ +
Sbjct: 507 GLLNEGKNVFKSI 519


>gi|347954462|gb|AEP33731.1| chlororespiratory reduction 21, partial [Crucihimalaya wallichii]
          Length = 830

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 222/764 (29%), Positives = 396/764 (51%), Gaps = 46/764 (6%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-- 89
           LC NG + EA++++  +  +  ++    Y  +LQ C+    +   +++HA +    +   
Sbjct: 45  LCKNGEIKEALSLVTKMDFRNLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGDFYA 104

Query: 90  -DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            + +++TKL+  YAKC  L+ A+ +F  +R RN+++W+A+IG   R       +  F  M
Sbjct: 105 GNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEM 164

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           +++ +FPD+F+ P + +ACG       G+ +H  V+K G+     V +S+  +Y KCG L
Sbjct: 165 LENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYGKCGVL 224

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------- 261
             AR+ F+ + E++ VAWN+++ GY Q G N+EA RL   M ++ ++   VT        
Sbjct: 225 DDARKVFDEIPERNVVAWNALLVGYVQNGMNEEAIRLLSDMRKDGVEPSRVTVSTCLSAS 284

Query: 262 ------------------------NILIRS----YNQLGQCDVAMEMVKRMESLGITPDV 293
                                   NIL  S    Y ++G  + A  +  RM       DV
Sbjct: 285 ANMGGVAEGKQSHAIAILNGLELDNILGTSLLNFYCKVGLIEYAEMIFDRM----FDKDV 340

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            TW  +ISG+ Q G    A+ + + M    +  + VT+++ +SA    K L  G E+   
Sbjct: 341 VTWNLLISGYVQQGLVEDAIYMCQLMRLENLKYDCVTLSTLMSAAARTKNLKFGKEVQCY 400

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            ++     D+++ +  ++MY+KC  +  A++VFD   +KD+  WN+++A Y ++G  G+A
Sbjct: 401 CIRHSLESDIVLASITMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEA 460

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
             LF +MQ   VPPNVITWN++I   ++NG  +EA ++F +M ++  +  N  SW +++ 
Sbjct: 461 LRLFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKEMFLQM-QSSGISPNLISWTTMMN 519

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLE 532
           G  Q G    A+   RKMQ S   PN  +I   L A A L + +  + IHG ++R     
Sbjct: 520 GMVQNGCSEEAILFLRKMQDSGLRPNAFSITVALSASANLASLHFGRSIHGYIVRNLQHS 579

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
           SS+ +  SL+D YAK G+I  +  +F      ++  +N++I  Y L+G    A+ L+  +
Sbjct: 580 SSVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAITLYRSL 639

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
           +  G KP+  TF S++ A +  G ++   ++F  +   + + P +EHY  M+DL   +G+
Sbjct: 640 EDMGNKPDNITFTSLLSACNHVGDINQAIEIFTDMVSKHGVKPCLEHYGLMVDLLASAGE 699

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQI 712
            + A++ IE+MP +PD+ + ++L+ +C      +L       L + EP +      I   
Sbjct: 700 TDRALKLIEEMPYKPDARMIQSLVASCNKQHKSELVEYFSRHLLESEPENSGNYVTISNA 759

Query: 713 YAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL--VYTFVT 754
           YA+ G  ++ +K+R + +      + G  WI++K    V+ FV 
Sbjct: 760 YAVEGSWDEVVKMRDMMKAKGLTKNPGCSWIQIKGEEGVHVFVA 803



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 214/469 (45%), Gaps = 49/469 (10%)

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
           K  +   + P   ++   +S   +NG   +AL L  +M F  +          +  C   
Sbjct: 24  KHHDDQALNPSSTSYFHRVSSLCKNGEIKEALSLVTKMDFRNLRIGPEIYGEILQGCVYE 83

Query: 342 KALAMGMEIHSLAVKMG--FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           + L  G +IH+  +K G  +  +  +   L+  Y+KC+ LE A+ +F  ++ ++V+SW +
Sbjct: 84  RDLCTGKQIHARILKNGDFYAGNEYIETKLVIFYAKCDALEIAQVLFSKLRVRNVFSWAA 143

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDV-PPNVITWNVL--------------ISGY-IQNG 443
           +I   C+ G C  A   F++M E+++ P N +  NV               + GY ++ G
Sbjct: 144 IIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAG 203

Query: 444 NED------EAVDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFR 489
            ED         D++ + G  D  +        RN  +WN+L+ GY Q G    A+ +  
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALLVGYVQNGMNEEAIRLLS 263

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
            M+     P+ VT+ + L A A +    + K+ H   +   LE    +  SL++ Y K G
Sbjct: 264 DMRKDGVEPSRVTVSTCLSASANMGGVAEGKQSHAIAILNGLELDNILGTSLLNFYCKVG 323

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
            I Y+  IFD M  KD++TWN LI GYV  G    A+ +   M+   LK +  T  +++ 
Sbjct: 324 LIEYAEMIFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLENLKYDCVTLSTLMS 383

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEH----YSAMIDLYGRSGKLEEAMEFIEDMPI 665
           A +    +  GK+V     +CY I   +E      S  +D+Y + G + +A +   D  +
Sbjct: 384 AAARTKNLKFGKEV-----QCYCIRHSLESDIVLASITMDMYAKCGSIVDAKKVF-DSTV 437

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE----PGDVLIQRLIL 710
           E D  +W  LL A    G   L+  A+   ++++    P +V+   LI+
Sbjct: 438 EKDLILWNTLLAAYAESG---LSGEALRLFYEMQLESVPPNVITWNLII 483



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 111/269 (41%), Gaps = 3/269 (1%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--N 84
           T ++ +  NG   EAI  L  +   G +    +    L A  +  S+H  R +H ++  N
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKMQDSGLRPNAFSITVALSASANLASLHFGRSIHGYIVRN 575

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
           L     V ++T L+ +YAKCG ++ A  VF       L  ++AMI AY+     +E + L
Sbjct: 576 LQHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAITL 635

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           +  +   G  PD+  F  +L AC + GD  +A ++   +V K G+         ++ +  
Sbjct: 636 YRSLEDMGNKPDNITFTSLLSACNHVGDINQAIEIFTDMVSKHGVKPCLEHYGLMVDLLA 695

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
             G+   A +  E M  K        +          E    F +   E        +  
Sbjct: 696 SAGETDRALKLIEEMPYKPDARMIQSLVASCNKQHKSELVEYFSRHLLESEPENSGNYVT 755

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPD 292
           +  +Y   G  D  ++M   M++ G+T +
Sbjct: 756 ISNAYAVEGSWDEVVKMRDMMKAKGLTKN 784


>gi|347954464|gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
          Length = 829

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 226/757 (29%), Positives = 388/757 (51%), Gaps = 49/757 (6%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV 91
           LC  G + EA+ ++  + ++  ++    Y  +LQ C+    +   +++HA   ++   D 
Sbjct: 40  LCKKGEIREALGLVTEMGSRNVRIGPEIYGEILQGCVYERDLSTGQQIHA--RILKNGDF 97

Query: 92  FVK-----TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
           + K     TKL+  YAKC  L+ A+ +F  +R RN+++W+A+IG   R       +  F 
Sbjct: 98  YAKNEYIETKLVIFYAKCDALEVAQLLFSKLRARNVFSWAAIIGVRCRIGLVEGALMGFV 157

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M+++GLFPD+F+ P + +ACG       G+ +H  V K G+     V +S+  +Y KCG
Sbjct: 158 EMLENGLFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCG 217

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----- 261
            L  AR+ F+ + ++  VAWN+++ GY Q G N EA RL   M  E I+   VT      
Sbjct: 218 LLDDARKVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLSAMRNEGIEPTRVTVSTCLS 277

Query: 262 --------------------------NILIRS----YNQLGQCDVAMEMVKRMESLGITP 291
                                     NIL  S    Y ++G  + A  +  RM    I  
Sbjct: 278 ASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEYAEMIFDRM----IEK 333

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           DV TW  +ISG+ Q G    A+ + + M    +  + VT++S +SA      L +G E+ 
Sbjct: 334 DVVTWNLLISGYVQQGLVEDAIHMCQLMRRGNLNFDCVTLSSLMSAAARTHNLKLGKEVQ 393

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
              ++ GF  D+++ ++ + MY+KC  +  A++VF+   +KD+  WN+++A Y + G  G
Sbjct: 394 CYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNSTVEKDLILWNTLLAAYAEPGLSG 453

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
           +A  LF +MQ   VPPNVITWN +I   ++NG  +EA D+F +M ++  +  N  SW ++
Sbjct: 454 EALRLFYEMQLEGVPPNVITWNSVILSLLRNGQVNEAKDMFLQM-QSSGISPNLISWTTM 512

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR-RS 530
           + G  Q G    A+   RKMQ S    N  +I   L ACA L + +  + IHG ++R + 
Sbjct: 513 MNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANLASLHFGRSIHGYIIRNQH 572

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
             SS+ +  SL+D YAK G+I  +  +F      ++  +N++I  Y L+G    A  L+ 
Sbjct: 573 HSSSVSIETSLVDMYAKCGDISKAERVFGSKLYSELPLYNAMISAYALYGNVKEATALYR 632

Query: 591 QM-KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            + +  G++P+  T  +++ A   AG ++    +F  +   + + P +EHY  M+DL   
Sbjct: 633 SLDEDVGIEPDNITITNVLSACHHAGDINQAIHIFTDMVSKHAMKPCLEHYGLMVDLLAS 692

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +G+ E+A+  IE+MP +PD+ + ++LL +C      +L       L + EP +      I
Sbjct: 693 AGETEKALRLIEEMPYKPDARMIQSLLASCNKQHKSELVEYLSRHLLESEPENSGNYVTI 752

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
             +YA+ G  ++  K+R++ +    +   G  WI++K
Sbjct: 753 SNVYAVEGSWDEVGKMREMMKVKGLKKKPGCSWIQIK 789



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 4/199 (2%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--N 84
           T ++ L  NG   EAI  L  +   G ++   +    L AC +  S+H  R +H ++  N
Sbjct: 511 TMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANLASLHFGRSIHGYIIRN 570

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
                 V ++T L+ +YAKCG +  A  VF       L  ++AMI AY+     +E   L
Sbjct: 571 QHHSSSVSIETSLVDMYAKCGDISKAERVFGSKLYSELPLYNAMISAYALYGNVKEATAL 630

Query: 145 FFLMVQD-GLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
           +  + +D G+ PD+     +L AC + GD  +A  +   +V K  M         ++ + 
Sbjct: 631 YRSLDEDVGIEPDNITITNVLSACHHAGDINQAIHIFTDMVSKHAMKPCLEHYGLMVDLL 690

Query: 203 VKCGKLIWARRFFESMDEK 221
              G+   A R  E M  K
Sbjct: 691 ASAGETEKALRLIEEMPYK 709


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 223/711 (31%), Positives = 367/711 (51%), Gaps = 81/711 (11%)

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           ++ V +  G    AR+ F+++ + D    +++IS     G ++EA +++  +    IK  
Sbjct: 18  LIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPD 77

Query: 258 VVTF-----------------------------------NILIRSYNQLGQCDVAMEMVK 282
           +  F                                   N LI +Y   G+C   +E  +
Sbjct: 78  MPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAY---GKCK-CVEGAR 133

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
           R+    +  DV +WT + S + + G   + +D+F+EM + GV PN +T++S + AC +LK
Sbjct: 134 RVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELK 193

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
            L  G EIH  AV+ G   ++ V ++L+++Y+KC  +  A  VFD++  +DV        
Sbjct: 194 DLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDV-------- 245

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                      ++WN +++ Y +N   ++   LF +M + D V+
Sbjct: 246 ---------------------------VSWNGVLTAYFKNKEYEKGFSLFLKMSR-DGVR 277

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
            + A+WN++I G  + G+   A+ +FRKMQ   F PN +TI S+LPAC++       KEI
Sbjct: 278 ADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEI 337

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           H  V R      L    +L+  YAK G++  SR +FD M  KD++ WN++I    +HG  
Sbjct: 338 HCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNG 397

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
             AL LFD+M    ++PN  TF  ++   S + +V+ G ++F S+   + + P   HYS 
Sbjct: 398 KEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSC 457

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           ++D+Y R+G+L EA +FI+ MP+EP +S W ALL ACR++ N++LA ++ ++LF++EP +
Sbjct: 458 VVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNN 517

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYS 762
                 +  I        +A +VR L +E     + G  W++V N V+TFV G  S   S
Sbjct: 518 PGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIES 577

Query: 763 DLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
           D +Y++L  + E +        + +    I++EEK E    HSEKLA+AF ++ +     
Sbjct: 578 DKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEKLAVAFGIL-NLNGQS 636

Query: 818 TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           TIR+ KN+R+C  CH   KY+S +    I + DS   HHFKNG CSC D W
Sbjct: 637 TIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCSCKDLW 687



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 242/493 (49%), Gaps = 39/493 (7%)

Query: 19  KSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARK 78
           + +P    T +  L  +G  NEAI +  S+  +G K     ++   +AC  S      ++
Sbjct: 40  QPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKE 99

Query: 79  LHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 137
           +H        + DVFV   L+  Y KC C++ AR VF+D+  R++ +W+++   Y +   
Sbjct: 100 VHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGF 159

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
            R+ +++F  M   G+ P+      IL AC    D ++GK +H   ++ GM     V ++
Sbjct: 160 PRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSA 219

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           ++++Y KC  +  AR  F+ M  +D V+WN +++ YF+  E ++   LF KM R+ ++  
Sbjct: 220 LVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRAD 279

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
             T+N +I    + G+ + A+EM ++M+ +G                           FK
Sbjct: 280 EATWNAVIGGCMENGRSEEAVEMFRKMQKMG---------------------------FK 312

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
                   PN +TI+S + AC+  + L MG EIH    +     D+    +L+ MY+KC 
Sbjct: 313 --------PNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCG 364

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           +L  +  VFDM++ KDV +WN+MI      G   +A  LF KM  S V PN +T+  ++S
Sbjct: 365 DLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLS 424

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
           G   +   +E V +F  MG++  V+ +   ++ ++  Y + G+ N A   ++ +Q     
Sbjct: 425 GCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEA---YKFIQGMPME 481

Query: 498 PNCVTILSVLPAC 510
           P      ++L AC
Sbjct: 482 PTASAWGALLAAC 494


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 250/770 (32%), Positives = 392/770 (50%), Gaps = 81/770 (10%)

Query: 170 CGDFEAGKLMHS-LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
           C + ++ K +H+ LV+   +  V  +   ++ +Y   G +  AR  F+ +  +D  AWN 
Sbjct: 64  CTNLQSAKCLHARLVVSKQIQNVC-ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNL 122

Query: 229 MISGYFQIGENDEAHRLFD-------------------KMCREEI----------KLG-- 257
           MISGY + G + E  R F                    K CR  I          K G  
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFM 182

Query: 258 --VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             V     LI  Y++      A  +   M       D+ +W  MISG+ Q+G   +AL L
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMP----VRDMGSWNAMISGYCQSGNAKEALTL 238

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
              +  +    + VT+ S +SACT+      G+ IHS ++K G   ++ V N LI++Y++
Sbjct: 239 SNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
              L   ++VFD +  +D+ SWNS+I  Y       +A  LF +M+ S + P+ +T   L
Sbjct: 295 FGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL 354

Query: 436 ISGYIQNGN------------------ED-----EAVDLFQRMGKNDKVK--------RN 464
            S   Q G+                  ED       V ++ ++G  D  +         +
Sbjct: 355 ASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTD 414

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSC-FYPNCVTILSVLPACAYLVASNKVKEIH 523
             SWN++I+GY Q G  + A+ ++  M+       N  T +SVLPAC+   A  +  ++H
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
           G +L+  L   + V+ SL D Y K G +  + ++F  +   + + WN+LI  +  HG   
Sbjct: 475 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 534

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            A+ LF +M   G+KP+  TF++++ A S +G+VD G+  F  +   Y I P ++HY  M
Sbjct: 535 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCM 594

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           +D+YGR+G+LE A++FI+ M ++PD+SIW ALL+ACR+HGN+DL  +A E LF++EP  V
Sbjct: 595 VDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHV 654

Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
               L+  +YA  GK E   ++R +      R + G   +EV N V  F TG  +    +
Sbjct: 655 GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYE 714

Query: 764 LLY---SWLQNVPENVTARSSHSGLC--IEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
            +Y   + LQ   + +     H  +   +E++EKE I   HSE+LA+AFALI ++ A  T
Sbjct: 715 EMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALI-ATPAKTT 773

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IRI KN+R+C  CH   K++S +   EI + DS   HHFKNG CSCGDYW
Sbjct: 774 IRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 156/589 (26%), Positives = 266/589 (45%), Gaps = 83/589 (14%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
            L + C +  S   A+ LHA L +  +I +V +  KL+++Y   G +  AR  F+ ++ R
Sbjct: 59  TLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFL-MVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           ++Y W+ MI  Y R     EV+  F L M+  GL PD   FP +L+AC    D   G  +
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKI 172

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H L +K G      V  S++ +Y +   +  AR  F+ M  +D  +WN+MISGY Q G  
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232

Query: 240 DEAHRLFDKM--------------CRE-------------EIKLG----VVTFNILIRSY 268
            EA  L + +              C E              IK G    +   N LI  Y
Sbjct: 233 KEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
            + G+     ++  RM       D+ +W  +I  +  N +  +A+ LF+EM    + P+ 
Sbjct: 293 AEFGRLRDCQKVFDRM----YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMG-FTDDVLVGNSLINMYSKCEELEAAERVFD 387
           +T+ S  S  + L  +     +    ++ G F +D+ +GN+++ MY+K   +++A  VF+
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELF-IKMQESDVPPNVITWNVLISGYIQNGNED 446
            + + DV SWN++I+GY Q G+  +A E++ I  +E ++  N  TW  ++    Q G   
Sbjct: 409 WLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALR 468

Query: 447 EAVDLFQRMGKND-----------------------------KVKR-NTASWNSLIAGYQ 476
           + + L  R+ KN                              ++ R N+  WN+LIA + 
Sbjct: 469 QGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHG 528

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV----LRRSLE 532
             G    A+ +F++M      P+ +T +++L AC++   S  V E   C         + 
Sbjct: 529 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH---SGLVDEGQWCFEMMQTDYGIT 585

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
            SL     ++D Y ++G +  +      MS   D   W +L+    +HG
Sbjct: 586 PSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 634



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 234/520 (45%), Gaps = 54/520 (10%)

Query: 32  LCGNGRLNEAITVLDSIA----TQGAKVRRNTYINLLQAC---IDSNSIHLARKLHAFLN 84
           + G GR   +  V+   +    + G      T+ ++L+AC   ID N IH       F+ 
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFM- 182

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
                DV+V   L+ +Y++   + +AR +F++M  R++ +W+AMI  Y +    +E    
Sbjct: 183 ----WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA--- 235

Query: 145 FFLMVQDGLFP-DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
             L + +GL   D      +L AC   GDF  G  +HS  IK G+     V N ++ +Y 
Sbjct: 236 --LTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           + G+L   ++ F+ M  +D ++WNS+I  Y    +   A  LF +M    I+   +T   
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353

Query: 264 LIRSYNQLG--------------------QCDVAMEMVKRMESLGIT------------P 291
           L    +QLG                       +   +V     LG+              
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT 413

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEI 350
           DV +W  +ISG+AQNG  S+A++++  M   G +  N  T  S + AC+   AL  GM++
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H   +K G   DV V  SL +MY KC  LE A  +F  I   +   WN++IA +   G+ 
Sbjct: 474 HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHG 533

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
            KA  LF +M +  V P+ IT+  L+S    +G  DE    F+ M  +  +  +   +  
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC 593

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           ++  Y + GQ   AL   + M      P+     ++L AC
Sbjct: 594 MVDMYGRAGQLETALKFIKSMS---LQPDASIWGALLSAC 630


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 249/755 (32%), Positives = 372/755 (49%), Gaps = 89/755 (11%)

Query: 190 CVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
           CVR + N++L+++V+ G L+ A   F  M E+D  +WN ++ GY + G  DEA  L+ +M
Sbjct: 131 CVR-LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRM 189

Query: 250 CREEIKLGVVTF-----------------------------------NILIRSYNQLGQC 274
              EI+  V TF                                   N LI  Y + G  
Sbjct: 190 LWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDI 249

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
             A  +  +M       D  +W  MISG+ +NG   + L+LF  M  + V P+ +T+T+ 
Sbjct: 250 SNARMLFDKMPK----RDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTV 305

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
            SAC  L    +G  +H   VK  F  D+ + NSLI MYS    LE AE VF  ++ KDV
Sbjct: 306 ASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDV 365

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN-------------------------- 428
            SW +MIA         KA E +  M+   + P+                          
Sbjct: 366 VSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEI 425

Query: 429 ---------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
                    VI  N LI  Y +    D A+++F+ +       +N  SW SLI G +   
Sbjct: 426 AIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISG-----KNVVSWTSLILGLRINN 480

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
           +   AL  FR+M+ S   PN VT++SVL ACA + A  + KEIH   LR  +     + N
Sbjct: 481 RSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPN 539

Query: 540 SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
           +++D Y + G  V +   F+    KD+  WN L+ GY   G    A++LFD+M    + P
Sbjct: 540 AILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHP 598

Query: 600 NRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEF 659
           +  TF+S++ A S +GMV  G + F  +   Y + P ++HY+ ++D+ GR+G+L++A +F
Sbjct: 599 DEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDF 658

Query: 660 IEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKP 719
           I+DMPI PD++IW ALL ACRIH N++L  +A +R+F+ +   V    L+  +YA CG  
Sbjct: 659 IQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNW 718

Query: 720 EDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD----LLYSWLQNVPEN 775
           +   KVR L RE       G  W+E+K  V+ F++G  S S S     +L  +   + EN
Sbjct: 719 DKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKEN 778

Query: 776 VTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETA 835
                  S     E  + +I   HSE+ A+AF LI ++     I + KN+ MC  CH   
Sbjct: 779 GFGNLKSSFTSEIESSRADIFCGHSERQAIAFGLINTAPG-MPIWVTKNLYMCHSCHNMV 837

Query: 836 KYVSMMHHCEIFLADSKCLHHFKNGQCSCGD--YW 868
           K++S +   EI + D +  HHFK+G CSCGD  YW
Sbjct: 838 KFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 164/563 (29%), Positives = 276/563 (49%), Gaps = 73/563 (12%)

Query: 13  HSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNS 72
           HS + +  N   R+     LC  G L +A+  L+S+     +V  + YI LL+ C    +
Sbjct: 58  HSAIDQTQNLELRE-----LCLQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRA 112

Query: 73  IHLARKLHAFLNLVTE-IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGA 131
                +++  ++     + V +   LLS++ + G L DA  VF  M ER++++W+ ++G 
Sbjct: 113 PDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGG 172

Query: 132 YSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCV 191
           Y++   + E + L+  M+   + P+ + FP +L+ C    D   GK +H+ VI+ G    
Sbjct: 173 YAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESD 232

Query: 192 RRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR 251
             V N+++ +YVKCG +  AR  F+ M ++D ++WN+MISGYF+ G   E   LF  M  
Sbjct: 233 VDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRE 292

Query: 252 EEIKLGVVTF-----------------------------------NILIRSYNQLGQCDV 276
             +   ++T                                    N LI+ Y+ LG+ + 
Sbjct: 293 LSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEE 352

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
           A  +  RMES     DV +WT MI+    +    +A++ +K M   G++P+ +T+ S +S
Sbjct: 353 AETVFSRMES----KDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLS 408

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           AC  +  L +G+ +H +A+K G    V+V NSLI+MYSKC+ ++ A  VF  I  K+V S
Sbjct: 409 ACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVS 468

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS----GYIQNGNEDEA---- 448
           W S+I G        +A   F +M+ES  P +V   +VL +    G +  G E  A    
Sbjct: 469 WTSLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALR 528

Query: 449 -------------VDLFQRMGKN-------DKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
                        +D++ R G+        +  K++  +WN L+ GY Q GQ   A+ +F
Sbjct: 529 TGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELF 588

Query: 489 RKMQSSCFYPNCVTILSVLPACA 511
            KM     +P+ +T +S+L AC+
Sbjct: 589 DKMLELEIHPDEITFISLLCACS 611



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 151/544 (27%), Positives = 249/544 (45%), Gaps = 72/544 (13%)

Query: 240 DEAHRLFDKMCREE----IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
           DE  R+++ +   +    ++LG    ++ +R  N L    V  +M +R        DVF+
Sbjct: 114 DEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSER--------DVFS 165

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  ++ G+A+ G   +AL+L+  M +  + PN  T  S +  C  +  +A G EIH+  +
Sbjct: 166 WNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVI 225

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           + GF  DV VGN+LI MY KC ++  A  +FD +  +D  SWN+MI+GY + G   +  E
Sbjct: 226 RFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLE 285

Query: 416 LFIKMQESDVPPNVITW-----------------------------------NVLISGYI 440
           LF  M+E  V P++IT                                    N LI  Y 
Sbjct: 286 LFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYS 345

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
             G  +EA  +F RM   D V     SW ++IA          A+  ++ M+     P+ 
Sbjct: 346 SLGRLEEAETVFSRMESKDVV-----SWTAMIASLVSHKLPFKAVETYKMMELEGILPDE 400

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           +T++SVL ACA +   +    +H   ++  L S + V NSLID Y+K   +  +  +F  
Sbjct: 401 ITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRN 460

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           +S K++++W SLI G  ++     AL  F QMK   +KPN  T +S++ A +  G +  G
Sbjct: 461 ISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRG 519

Query: 621 KKVFCSITECY----QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           K++              +P     +A++D+Y R G+   A+        + D + W  LL
Sbjct: 520 KEIHAHALRTGVGFDGFLP-----NAILDMYVRCGRKVPALNQFNSQ--KKDVTAWNILL 572

Query: 677 TACRIHGNIDLAVLAIERLFDLE--PGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           T     G   LAV   +++ +LE  P ++        I  +C   +  +    LE  N  
Sbjct: 573 TGYAQQGQAKLAVELFDKMLELEIHPDEITF------ISLLCACSKSGMVTEGLEYFNIM 626

Query: 735 RNSF 738
           +N +
Sbjct: 627 KNKY 630


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 253/865 (29%), Positives = 408/865 (47%), Gaps = 165/865 (19%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMR--ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           T ++S+Y        A  V   +      ++ W+ +I          +V++L+  M + G
Sbjct: 62  THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 121

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             PD + FP +L+ACG    F                              +CG  + A 
Sbjct: 122 WRPDHYTFPFVLKACGEIPSF------------------------------RCGASVHAV 151

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
            F        G  WN  +                               N L+  Y + G
Sbjct: 152 VF------ASGFEWNVFVG------------------------------NGLVSMYGRCG 175

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF-VGVMPNGVTI 331
             + A ++   M   G+  D+ +W  +++ + Q G + +A+ +F+ M+  +G+ P+ V++
Sbjct: 176 AWENARQVFDEMRERGVG-DLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSL 234

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
            + + AC  + A + G ++H  A++ G  +DV VGN++++MY+KC  +E A +VF+ +K 
Sbjct: 235 VNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKV 294

Query: 392 KDVYSWNSMIAGYCQ------------------------------AGYCGK-----AYEL 416
           KDV SWN+M+ GY Q                              AGY  +     A ++
Sbjct: 295 KDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDV 354

Query: 417 FIKMQESDVPPNVITWNVLISG-------------------YIQNGNEDEA--------- 448
           F +M+     PNV+T   L+SG                   +I N +E++          
Sbjct: 355 FRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINA 414

Query: 449 -VDLFQRMGKNDKVK----------RNTASWNSLIAGYQQLGQKNNALGVFRKM-QSSCF 496
            +D++ +       +          R+  +W  LI G  Q G+ N AL +F +M Q   F
Sbjct: 415 LIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNF 474

Query: 497 -YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS-LPVMNSLIDTYAKSGNIVYS 554
             PN  TI   L ACA L A    ++IH  VLR   ES+ L V N LID Y+KSG++  +
Sbjct: 475 VMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAA 534

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           R +FD M  ++ ++W SL+ GY +HG    AL +F +M+  GL P+  TF+ ++ A S +
Sbjct: 535 RVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHS 594

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           GMVD G   F  + + + ++P  EHY+ M+DL  R+G+L+EAME I  MP++P  ++W A
Sbjct: 595 GMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVA 654

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           LL+ACR++ N++L   A  +L +LE G+     L+  IYA     +D  ++R L +    
Sbjct: 655 LLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGI 714

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPENVTARSSHSG 784
           +   G  W++ +    TF  G WS   S  +Y  L++          VP+N  A      
Sbjct: 715 KKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHD--- 771

Query: 785 LCIEEEEKEEISGIHSEKLALAFALIGSSQ-APHTIRIVKNIRMCVHCHETAKYVSMMHH 843
             +++EEK ++   HSEKLALA+ ++ ++  AP  IRI KN+R C  CH    Y+S++  
Sbjct: 772 --VDDEEKGDLLSEHSEKLALAYGILTTAPGAP--IRITKNLRACGDCHSAFTYISIIIE 827

Query: 844 CEIFLADSKCLHHFKNGQCSCGDYW 868
            EI + DS   HHFKNG CSC  YW
Sbjct: 828 HEIIVRDSSRFHHFKNGSCSCRGYW 852



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 165/540 (30%), Positives = 257/540 (47%), Gaps = 98/540 (18%)

Query: 25  RDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN 84
           R  HL FL       + + +   +   G +    T+  +L+AC +  S      +HA + 
Sbjct: 100 RSVHLGFL------EDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 153

Query: 85  LVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER---NLYTWSAMIGAYSRDQRWRE 140
               E +VFV   L+S+Y +CG  ++AR+VF++MRER   +L +W++++ AY +      
Sbjct: 154 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 213

Query: 141 VVELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
            +++F  M +D G+ PD      +L AC + G +  GK +H   ++ G+     V N+V+
Sbjct: 214 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 273

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +Y KCG +  A + FE M  KD V+WN+M++GY QIG  D+A  LF+K+  E+I+L VV
Sbjct: 274 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 333

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           T++ +I  Y Q G    A+++ ++M   G  P+V                          
Sbjct: 334 TWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNV-------------------------- 367

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT-------DDVLVGNSLINM 372
                    VT+ S +S C     L  G E H  A+K           DD++V N+LI+M
Sbjct: 368 ---------VTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDM 418

Query: 373 YSKCEELEAAERVFDMI--KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD--VPPN 428
           YSKC+  +AA  +FD+I  KD+ V +W  +I G  Q G   +A ELF +M + D  V PN
Sbjct: 419 YSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPN 478

Query: 429 VIT------------------------------------WNVLISGYIQNGNEDEAVDLF 452
             T                                     N LI  Y ++G+ D A  +F
Sbjct: 479 AFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVF 538

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
             M      +RN  SW SL+ GY   G+   AL +F +MQ     P+ VT + VL AC++
Sbjct: 539 DNMH-----QRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSH 593



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 4/146 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYI--NLLQACIDSNSIHLARKLHAFL--NLVTEID 90
           +G  NEA+ +   +      V  N +     L AC    ++   R++HA++  N      
Sbjct: 455 HGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAM 514

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +FV   L+ +Y+K G +D AR VF++M +RN  +W++++  Y    R  E +++F+ M +
Sbjct: 515 LFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQK 574

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAG 176
            GL PD   F  +L AC + G  + G
Sbjct: 575 VGLVPDGVTFVVVLYACSHSGMVDQG 600


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 249/755 (32%), Positives = 372/755 (49%), Gaps = 89/755 (11%)

Query: 190 CVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
           CVR + N++L+++V+ G L+ A   F  M E+D  +WN ++ GY + G  DEA  L+ +M
Sbjct: 131 CVR-LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRM 189

Query: 250 CREEIKLGVVTF-----------------------------------NILIRSYNQLGQC 274
              EI+  V TF                                   N LI  Y + G  
Sbjct: 190 LWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDI 249

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
             A  +  +M       D  +W  MISG+ +NG   + L+LF  M  + V P+ +T+T+ 
Sbjct: 250 SNARMLFDKMPK----RDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTV 305

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
            SAC  L    +G  +H   VK  F  D+ + NSLI MYS    LE AE VF  ++ KDV
Sbjct: 306 ASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDV 365

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN-------------------------- 428
            SW +MIA         KA E +  M+   + P+                          
Sbjct: 366 VSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEI 425

Query: 429 ---------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
                    VI  N LI  Y +    D A+++F+ +       +N  SW SLI G +   
Sbjct: 426 AIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISG-----KNVVSWTSLILGLRINN 480

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
           +   AL  FR+M+ S   PN VT++SVL ACA + A  + KEIH   LR  +     + N
Sbjct: 481 RSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPN 539

Query: 540 SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
           +++D Y + G  V +   F+    KD+  WN L+ GY   G    A++LFD+M    + P
Sbjct: 540 AILDMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHP 598

Query: 600 NRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEF 659
           +  TF+S++ A S +GMV  G + F  +   Y + P ++HY+ ++D+ GR+G+L++A +F
Sbjct: 599 DEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDF 658

Query: 660 IEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKP 719
           I+DMPI PD++IW ALL ACRIH N++L  +A +R+F+ +   V    L+  +YA CG  
Sbjct: 659 IQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNW 718

Query: 720 EDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD----LLYSWLQNVPEN 775
           +   KVR L RE       G  W+E+K  V+ F++G  S S S     +L  +   + EN
Sbjct: 719 DKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKEN 778

Query: 776 VTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETA 835
                  S     E  + +I   HSE+ A+AF LI ++     I + KN+ MC  CH   
Sbjct: 779 GFGNLKSSFTSEIESSRADIFCGHSERQAIAFGLINTAPG-MPIWVXKNLYMCHSCHNMV 837

Query: 836 KYVSMMHHCEIFLADSKCLHHFKNGQCSCGD--YW 868
           K++S +   EI + D +  HHFK+G CSCGD  YW
Sbjct: 838 KFISTIVRREISVRDVEEYHHFKDGVCSCGDEGYW 872



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 164/563 (29%), Positives = 276/563 (49%), Gaps = 73/563 (12%)

Query: 13  HSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNS 72
           HS + +  N   R+     LC  G L +A+  L+S+     +V  + YI LL+ C    +
Sbjct: 58  HSAIDQTQNLELRE-----LCLQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRA 112

Query: 73  IHLARKLHAFLNLVTE-IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGA 131
                +++  ++     + V +   LLS++ + G L DA  VF  M ER++++W+ ++G 
Sbjct: 113 PDEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGG 172

Query: 132 YSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCV 191
           Y++   + E + L+  M+   + P+ + FP +L+ C    D   GK +H+ VI+ G    
Sbjct: 173 YAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESD 232

Query: 192 RRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR 251
             V N+++ +YVKCG +  AR  F+ M ++D ++WN+MISGYF+ G   E   LF  M  
Sbjct: 233 VDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRE 292

Query: 252 EEIKLGVVTF-----------------------------------NILIRSYNQLGQCDV 276
             +   ++T                                    N LI+ Y+ LG+ + 
Sbjct: 293 LSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEE 352

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
           A  +  RMES     DV +WT MI+    +    +A++ +K M   G++P+ +T+ S +S
Sbjct: 353 AETVFSRMES----KDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLS 408

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           AC  +  L +G+ +H +A+K G    V+V NSLI+MYSKC+ ++ A  VF  I  K+V S
Sbjct: 409 ACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVS 468

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS----GYIQNGNEDEA---- 448
           W S+I G        +A   F +M+ES  P +V   +VL +    G +  G E  A    
Sbjct: 469 WTSLILGLRINNRSFEALLFFRQMKESMKPNSVTLISVLSACARIGALMRGKEIHAHALR 528

Query: 449 -------------VDLFQRMGKN-------DKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
                        +D++ R G+        +  K++  +WN L+ GY Q GQ   A+ +F
Sbjct: 529 TGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQKKDVTAWNILLTGYAQQGQAKLAVELF 588

Query: 489 RKMQSSCFYPNCVTILSVLPACA 511
            KM     +P+ +T +S+L AC+
Sbjct: 589 DKMLELEIHPDEITFISLLCACS 611



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 151/544 (27%), Positives = 249/544 (45%), Gaps = 72/544 (13%)

Query: 240 DEAHRLFDKMCREE----IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
           DE  R+++ +   +    ++LG    ++ +R  N L    V  +M +R        DVF+
Sbjct: 114 DEGSRVYELVSSSKSCLCVRLGNALLSMFVRFGNLLDAWYVFGKMSER--------DVFS 165

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  ++ G+A+ G   +AL+L+  M +  + PN  T  S +  C  +  +A G EIH+  +
Sbjct: 166 WNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVI 225

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           + GF  DV VGN+LI MY KC ++  A  +FD +  +D  SWN+MI+GY + G   +  E
Sbjct: 226 RFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLE 285

Query: 416 LFIKMQESDVPPNVITW-----------------------------------NVLISGYI 440
           LF  M+E  V P++IT                                    N LI  Y 
Sbjct: 286 LFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYS 345

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
             G  +EA  +F RM   D V     SW ++IA          A+  ++ M+     P+ 
Sbjct: 346 SLGRLEEAETVFSRMESKDVV-----SWTAMIASLVSHKLPFKAVETYKMMELEGILPDE 400

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           +T++SVL ACA +   +    +H   ++  L S + V NSLID Y+K   +  +  +F  
Sbjct: 401 ITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRN 460

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           +S K++++W SLI G  ++     AL  F QMK   +KPN  T +S++ A +  G +  G
Sbjct: 461 ISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE-SMKPNSVTLISVLSACARIGALMRG 519

Query: 621 KKVFCSITECY----QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           K++              +P     +A++D+Y R G+   A+        + D + W  LL
Sbjct: 520 KEIHAHALRTGVGFDGFLP-----NAILDMYVRCGRKVPALNQFNSQ--KKDVTAWNILL 572

Query: 677 TACRIHGNIDLAVLAIERLFDLE--PGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           T     G   LAV   +++ +LE  P ++        I  +C   +  +    LE  N  
Sbjct: 573 TGYAQQGQAKLAVELFDKMLELEIHPDEITF------ISLLCACSKSGMVTEGLEYFNIM 626

Query: 735 RNSF 738
           +N +
Sbjct: 627 KNKY 630


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 219/617 (35%), Positives = 341/617 (55%), Gaps = 44/617 (7%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           ++F W  ++S + +N     A+ +F E+ S     P+  T+   I AC  L  L +G  I
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELE-AAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           H +A KM    DV VGN+LI MY KC  +E A +RVFD++  K V SWN+++ GY Q   
Sbjct: 231 HGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSD 290

Query: 410 CGKAYELFIKMQESDVPPNVITWNVL---------------ISGY-IQNGNEDEAVDLFQ 453
             KA +L+++M +S + P+  T   L               I G+ ++NG    AVD F 
Sbjct: 291 PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNG---LAVDPFI 347

Query: 454 RM---------GK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
            +         GK        +    R+  SWN +IAGY Q G  + A+ +FR+M S   
Sbjct: 348 GISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGI 407

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            P  + I+ V  AC+ L A    KE+H   L+  L   + V +S+ID YAK G I  S+ 
Sbjct: 408 QPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQR 467

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           IFD +  KD+ +WN +I GY +HG    AL+LF++M   GLKP+  TF  I++A S AG+
Sbjct: 468 IFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGL 527

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           V+ G + F  +   + I P +EHY+ ++D+ GR+G++++A+  IE+MP +PDS IW +LL
Sbjct: 528 VEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLL 587

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
           ++CRIHGN+ L      +L +LEP       LI  ++A  GK +D  +VR   ++   + 
Sbjct: 588 SSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQK 647

Query: 737 SFGQCWIEVKNLVYTFVTGG-WSESYSDLLYSWLQ-NVPENVTARSSHSGLCIEEEEKEE 794
             G  WIEV   V+ F+ G        ++  +W +  V  +    +  +G  + + E+E+
Sbjct: 648 DAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEEED 707

Query: 795 ISGI---HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
             GI   HSEKLA++F L+ +++    +R+ KN+R+C  CH  AK++S + + +I + D+
Sbjct: 708 KIGILRGHSEKLAISFGLLNTAKGL-PVRVYKNLRICGDCHNAAKFISKVVNRDIVVRDN 766

Query: 852 KCLHHFKNGQCSCGDYW 868
           K  HHF++G CSCGDYW
Sbjct: 767 KRFHHFRDGICSCGDYW 783



 Score =  225 bits (574), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 144/537 (26%), Positives = 267/537 (49%), Gaps = 44/537 (8%)

Query: 14  SLLTKKSNPRFRDTH-LDFLCGNGRLNEAITVL----DSIATQGAKVRRNTYINLLQACI 68
           S     +N +F   H +  LC +G L EA+  L    D +    A+ R      LLQAC 
Sbjct: 58  SFANSSTNRQFSSLHEIKKLCESGNLKEALDFLQRESDDVVLDSAQ-RSEAMGVLLQACG 116

Query: 69  DSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWS 126
               I + R+LH  ++  T+   D  + T+++++Y+ CG   D+R VF+ +R +NL+ W+
Sbjct: 117 QRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWN 176

Query: 127 AMIGAYSRDQRWREVVELFFLMVQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSLVIK 185
           A++ AY+R++ + + + +F  ++      PD+F  P +++AC    D   G+++H +  K
Sbjct: 177 AIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATK 236

Query: 186 LGMSCVRRVRNSVLAVYVKCGKLIWA-RRFFESMDEKDGVAWNSMISGYFQIGENDEAHR 244
           + +     V N+++A+Y KCG +  A +R F+ MD K   +WN+++ GY Q  +  +A  
Sbjct: 237 MDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDPRKALD 296

Query: 245 LFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF---------- 294
           L+ +M    +     T   L+ + +++       E+       G+  D F          
Sbjct: 297 LYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYI 356

Query: 295 ---------------------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
                                +W  MI+G++QNG   +A++LF++M   G+ P  + I  
Sbjct: 357 CCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMC 416

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
              AC+ L AL +G E+H  A+K   T+D+ V +S+I+MY+K   +  ++R+FD +++KD
Sbjct: 417 VCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKD 476

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ 453
           V SWN +IAGY   G   +A ELF KM    + P+  T+  ++      G  ++ ++ F 
Sbjct: 477 VASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFN 536

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +M     ++     +  ++    + G+ ++AL +  +M      P+     S+L +C
Sbjct: 537 QMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGD---PDSRIWSSLLSSC 590



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 213/445 (47%), Gaps = 44/445 (9%)

Query: 63  LLQACIDSNSIHLARKLHAF---LNLVTEIDVFVKTKLLSVYAKCGCLDDA-REVFEDMR 118
           +++AC     + L + +H     ++LV+  DVFV   L+++Y KCG +++A + VF+ M 
Sbjct: 214 VIKACAGLLDLGLGQIIHGMATKMDLVS--DVFVGNALIAMYGKCGLVEEAVKRVFDLMD 271

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
            + + +W+A++  Y+++   R+ ++L+  M   GL PD F    +L AC        G+ 
Sbjct: 272 TKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEE 331

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H   ++ G++    +  S+L++Y+ CGK   A+  F+ M+ +  V+WN MI+GY Q G 
Sbjct: 332 IHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGL 391

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME------------------- 279
            DEA  LF +M  + I+   +    +  + +QL    +  E                   
Sbjct: 392 PDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSS 451

Query: 280 ---MVKRMESLGIT---------PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
              M  +   +G++          DV +W  +I+G+  +GR  +AL+LF++M  +G+ P+
Sbjct: 452 IIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPD 511

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS-LINMYSKCEELEAAERVF 386
             T T  + AC+    +  G+E  +  + +   +  L   + +++M  +   ++ A R+ 
Sbjct: 512 DFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLI 571

Query: 387 -DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM--QESDVPPNVITWNVLISGYIQNG 443
            +M  D D   W+S+++     G  G   ++  K+   E + P N +  + L +G   +G
Sbjct: 572 EEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAG---SG 628

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASW 468
             D+   +  RM      K    SW
Sbjct: 629 KWDDVRRVRGRMKDIGLQKDAGCSW 653



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 157/325 (48%), Gaps = 8/325 (2%)

Query: 31  FLCGNGRLNEAITVLD---SIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLV 86
            LCG  + ++    LD    +   G      T  +LL AC    S+H   ++H F L   
Sbjct: 281 LLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNG 340

Query: 87  TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
             +D F+   LLS+Y  CG    A+ +F+ M  R+L +W+ MI  YS++    E + LF 
Sbjct: 341 LAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFR 400

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M+ DG+ P +     +  AC        GK +H   +K  ++    V +S++ +Y K G
Sbjct: 401 QMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGG 460

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            +  ++R F+ + EKD  +WN +I+GY   G   EA  LF+KM R  +K    TF  ++ 
Sbjct: 461 CIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILM 520

Query: 267 SYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
           + +  G  +  +E   +M +L  I P +  +TC++    + GR   AL L +EM      
Sbjct: 521 ACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGD--- 577

Query: 326 PNGVTITSAISACTDLKALAMGMEI 350
           P+    +S +S+C     L +G ++
Sbjct: 578 PDSRIWSSLLSSCRIHGNLGLGEKV 602



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 111/239 (46%), Gaps = 38/239 (15%)

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           ++GN  EA+D  QR  ++D V  ++A             Q++ A+GV             
Sbjct: 79  ESGNLKEALDFLQR--ESDDVVLDSA-------------QRSEAMGV------------- 110

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS-LIDTYAKSGNIVYSRTIFD 559
                +L AC         + +H  V   +   +  V+N+ +I  Y+  G+   SR +FD
Sbjct: 111 -----LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFD 165

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG-LKPNRGTFLSIILAHSLAGMVD 618
            +  K++  WN+++  Y  +  +  A+ +F ++ S    KP+  T   +I A   AG++D
Sbjct: 166 KLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKA--CAGLLD 223

Query: 619 LG-KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           LG  ++   +     ++  +   +A+I +YG+ G +EEA++ + D+      S W ALL
Sbjct: 224 LGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALL 282


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 904

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 244/824 (29%), Positives = 417/824 (50%), Gaps = 91/824 (11%)

Query: 90  DVFVKTKLLSVYAKCGC---LDDAREVFEDMRERNL-YTWSAMIGAYSRDQRWREVVELF 145
           DV   TKL++   + G    L  A+EVFE+       + ++++I  Y+     +E + LF
Sbjct: 62  DVSAITKLVARSCELGTRESLSFAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLF 121

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M+  G+ PD + FP  L  C    D   G  +H L+IK+  +    V+NS++  Y +C
Sbjct: 122 IRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAEC 181

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-IKLGVVTFNIL 264
           G+L  AR+ F+ M E++ V+W SMI GY +     +A  LF +M R+E +    VT   +
Sbjct: 182 GELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVRDEDVIPNSVTMVCV 241

Query: 265 IRSYNQLGQCDVA----------------------MEMVKRMESLGITPDVFT------- 295
           I +  +L   +                        ++M  +  ++ I   +F        
Sbjct: 242 ISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEYGASNL 301

Query: 296 --WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
                M S + + G T +AL +   M   G+ P+ +++ SAIS+C+ L+ +  G   H  
Sbjct: 302 DLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGY 361

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            ++ GF     + N+LI+MY KC   + A R+FD + +K                     
Sbjct: 362 VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK--------------------- 400

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
                          V+TWN +++GYI+NG  D A + F  M +     +N  SWN++I+
Sbjct: 401 --------------TVVTWNSIVAGYIENGEVDAAWETFNTMPE-----KNIVSWNTIIS 441

Query: 474 GYQQLGQKNNALGVFRKMQSS-CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
              Q      A+ VF  MQS  C   + VT++S+  AC +L A +  K I+  + +  ++
Sbjct: 442 ALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQ 501

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
             + +  +L+D +++ G+   + +IF+ ++++D+  W + I    + G    A++LF++M
Sbjct: 502 LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEM 561

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
              GLKP+   F+  + A    G+V  GK++F S+ + + + P   HY  M+DL GR+G 
Sbjct: 562 IEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGL 621

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQI 712
           LEEA++ I+DMP EP+  IW +LL ACR+ GN+++A  A E++  L P       L+  +
Sbjct: 622 LEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNV 681

Query: 713 YAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
           YA  G+  D  KVR   +E   R   G   I+++   + F +G   ES+ ++    ++ +
Sbjct: 682 YASAGRWNDMAKVRLSMKEKGLRKPPGTSVIQIRGKTHEFTSG--DESHPEM--RKIEAM 737

Query: 773 PENVTARSSHSG---------LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
            + ++ R+S  G         + ++E+EK  +   HSEKLA+AF LI S++   TIRIVK
Sbjct: 738 LDELSQRASDLGHVPDLSNVLMDVDEQEKIFMLSRHSEKLAMAFGLISSNKGT-TIRIVK 796

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
           N+R+C +CH  AK+ S +++ EI L D+   H  + G+CSC D+
Sbjct: 797 NLRVCSYCHSFAKFASKVYNREIILRDNNRFHFIRQGKCSCSDF 840



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 204/453 (45%), Gaps = 42/453 (9%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T + ++ AC     +    K++ F+ +   E++  + + L+ +Y KC  +D A+ +F++ 
Sbjct: 237 TMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDEY 296

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
              NL   +AM   Y R    +E + +  LM+  G+ PD       + +C    +   GK
Sbjct: 297 GASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGK 356

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
             H  V++ G      + N+++ +Y+KC +   A R F+ M  K  V WNS+++GY + G
Sbjct: 357 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENG 416

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
           E D A   F+ M  + I    V++N +I +  Q    + A+E+   M+S           
Sbjct: 417 EVDAAWETFNTMPEKNI----VSWNTIISALVQENMYEEAIEVFHYMQS---------QE 463

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           C                         V  +GVT+ S  SAC  L AL +   I+    K 
Sbjct: 464 C-------------------------VNVDGVTMMSIASACGHLGALDLAKWIYYYIEKN 498

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
               DV +G +L++M+S+C + E+A  +F+ + ++DV +W + I     AG   +A ELF
Sbjct: 499 RIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELF 558

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
            +M E  + P+ + +   ++     G   +  ++F  M K   V      +  ++    +
Sbjct: 559 NEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGR 618

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            G    AL + + M +    PN V   S+L AC
Sbjct: 619 AGLLEEALQLIKDMPTE---PNDVIWNSLLAAC 648


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 255/914 (27%), Positives = 431/914 (47%), Gaps = 93/914 (10%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTE----IDV 91
           G   EA+     I   G K       +L+ AC + +SI +A++   F     +     DV
Sbjct: 37  GSYVEAVLFFRDICGIGIKPSGFMIASLVTAC-NKSSI-MAKEGFQFHGFAIKCGLIYDV 94

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV T  +  YA  G + +A+++F +M +RN+ +W++++ +YS +   +EV+  +  M  +
Sbjct: 95  FVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHE 154

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+  ++     ++ +CG   D   G  +    +K G+       NS++ ++  CG +  A
Sbjct: 155 GICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEA 214

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD--KMCREEIKLGVVTF-------- 261
              F  M+E+D ++WNS+IS   Q   ++E+ R F   ++  EEI    ++         
Sbjct: 215 CSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSV 274

Query: 262 -------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                                    N L+  Y+  G+   A  + +RM       D+ +W
Sbjct: 275 DYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPE----RDLISW 330

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             M++ + Q+GR   AL +F EM ++    N VT TSA++AC D +    G  +H   V 
Sbjct: 331 NSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVV 390

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
           +G  D++++GN+LI  Y KC ++  A++VF  +   D  +WN++I G+       +A   
Sbjct: 391 LGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAA 450

Query: 417 FIKMQESDVP-----------------PNVITWNV--------------------LISGY 439
           F  M+E                      ++I + +                    LI+ Y
Sbjct: 451 FKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMY 510

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
            + G+   +  +F ++     V + ++ WN++IA   + G    AL +  +M+S+    +
Sbjct: 511 AKCGDLHSSSYIFDQL-----VFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFD 565

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
                + L   A L    + +++HG  ++   E    ++N+ +D Y K G +  +  I  
Sbjct: 566 QFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILP 625

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
             + +  ++WN+LI     HG +H A + F  M   G+KPN  +F+ ++ A S  G+VD 
Sbjct: 626 QPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDE 685

Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
           G   + S+T  Y I P IEH   MIDL GRSG+L EA  FI +MPI P+  +W +LL +C
Sbjct: 686 GLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASC 745

Query: 680 RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFG 739
           RI+ N+DL   A + L +L+P D     L   ++A  G+ ED   VR     +  +    
Sbjct: 746 RIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPA 805

Query: 740 QCWIEVKNLVYTFVTGGWS----ESYSDLLYSWLQNVPE-NVTARSSHSGLCIEEEEKEE 794
             W++ K  +  F  G  +    E  +  L   ++ V E      +S+S    +EE+KE 
Sbjct: 806 HSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIVGEAGYVPDTSYSLQDTDEEQKEH 865

Query: 795 ISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCL 854
               HSE++ALAF LI   +   T+RI KN+R+C  CH   K+VS +   +I L D    
Sbjct: 866 NMWSHSERIALAFGLINIPEGS-TVRIFKNLRVCGDCHSFFKFVSGVLGRKIVLRDPYRF 924

Query: 855 HHFKNGQCSCGDYW 868
           HHF NG CSC DYW
Sbjct: 925 HHFTNGNCSCSDYW 938



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 171/666 (25%), Positives = 290/666 (43%), Gaps = 92/666 (13%)

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +Y+K G ++ A+ VF+ M ERN  +W+ M+  Y R   + E V  F  +   G+ P  F+
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 160 FPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
              ++ AC       + G   H   IK G+     V  S +  Y   G +  A++ F  M
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI------------------------ 254
            +++ V+W S++  Y   G   E    + +M  E I                        
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGH 180

Query: 255 -------KLGVVT----FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
                  K G+ T     N LI  +   G  + A  +   M       D  +W  +IS  
Sbjct: 181 QLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNE----RDTISWNSIISAN 236

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
           AQN    ++   F  M  V    N  T++  +S C  +  L  G  +H LAVK G   ++
Sbjct: 237 AQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNI 296

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
            + N+L+++YS     + AE +F  + ++D+ SWNSM+A Y Q G C  A ++F +M   
Sbjct: 297 CLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWM 356

Query: 424 DVPPNVITW-----------------------------------NVLISGYIQNGNEDEA 448
               N +T+                                   N LI+ Y +     EA
Sbjct: 357 KKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEA 416

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM-QSSCFYPNCVTILSVL 507
             +FQRM K DKV     +WN+LI G+    + N A+  F+ M + S    + +TI+++L
Sbjct: 417 KKVFQRMPKLDKV-----TWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNIL 471

Query: 508 PACAYLVASNKVK---EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
            +C  L   + +K    IH   +    +    V +SLI  YAK G++  S  IFD +  K
Sbjct: 472 GSC--LTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFK 529

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
               WN++I     +GF   AL L  +M+S G++ ++  F + +   +   M++ G+++ 
Sbjct: 530 TSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLH 589

Query: 625 CSITECYQIIPMIEHY--SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            S     ++   ++H+  +A +D+YG+ G+L++A+  +   P +     W  L++    H
Sbjct: 590 GSTI---KLGFELDHFIINAAMDMYGKCGELDDALRILPQ-PTDRSRLSWNTLISISARH 645

Query: 683 GNIDLA 688
           G    A
Sbjct: 646 GQFHKA 651


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 231/756 (30%), Positives = 367/756 (48%), Gaps = 106/756 (14%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M+  G  PD F FP +++ C   G  E G+  HS  I+LG+                 G 
Sbjct: 98  MLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGL----------------VGS 141

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
            ++                NS+++ Y ++G   +A R+FD M               +R 
Sbjct: 142 EVYT--------------GNSLLAFYAKLGMVADAERVFDGMP--------------VR- 172

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMP 326
                                   D+ TW  M+ G+  NG  + ALD F+EM   + V  
Sbjct: 173 ------------------------DIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQH 208

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           +GV I +A++AC    AL  G E+H+  ++ G   DV VG SL++MY KC  + +AE +F
Sbjct: 209 DGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMF 268

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-NVL---------- 435
             +  + V +WN MI GY   G   +A++ F++M+       V+T  N+L          
Sbjct: 269 ATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSL 328

Query: 436 ----ISGYIQNGN-------EDEAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQ 476
               + GY+           E   ++++ ++GK             +   SWN++IA Y 
Sbjct: 329 YGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYM 388

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
                N A+ +F ++ +   YP+  T+ +V+PA   L    + +++H  ++R     +  
Sbjct: 389 YKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTL 448

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           V N+++  YA+ G++V SR IFD M+ KD+I+WN++I GY +HG    AL++F +MKS G
Sbjct: 449 VTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNG 508

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           L+PN  TF+S++ A S++GM D G   F  +   Y IIP IEHY  M DL GR+G L E 
Sbjct: 509 LQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHYGCMTDLLGRAGDLREV 568

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
           ++FIE +PI P   IW +LLTA R   +ID+A  A ER+F+LE  +     ++  +YA  
Sbjct: 569 LKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELEHDNTGCYVILSSMYADA 628

Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS----WLQNV 772
           G+ ED  ++R    E   R +  +  +E+     +FV G  +   S  ++       + +
Sbjct: 629 GRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSCSFVNGDMTHPQSKTIHEVSDVLSRKI 688

Query: 773 PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCH 832
            E    R+    + +    +  I   HS +LA+ F LI SS+A   I + KN+R+C HCH
Sbjct: 689 GETDYPRNLSDPISL-TSRRTIIPNKHSVRLAVVFGLI-SSEARAPILVKKNVRICNHCH 746

Query: 833 ETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              K +S      I + D+   H F +G C CGDYW
Sbjct: 747 HALKLISKYSRRRIVVGDTNIYHEFLDGSCCCGDYW 782



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 117/464 (25%), Positives = 203/464 (43%), Gaps = 52/464 (11%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+ S+   G+   A+  V+       +PD F    +I GFA  G    AL  ++ M   G
Sbjct: 49  LVLSHAAAGRMHDALAAVRS------SPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAG 102

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT-DDVLVGNSLINMYSKCEELEAA 382
             P+  T    +  C  L AL  G   HS A+++G    +V  GNSL+  Y+K   +  A
Sbjct: 103 ARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADA 162

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES------------------- 423
           ERVFD +  +D+ +WNSM+ GY   G    A + F +M E                    
Sbjct: 163 ERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREMHEGLQVQHDGVGIIAALAACCL 222

Query: 424 -----------------DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                             +  +V     L+  Y + G    A  +F  M       R   
Sbjct: 223 DSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIASAEGMFATMP-----SRTVV 277

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           +WN +I GY   G    A   F +M++       VT +++L ACA   +S   + +HG V
Sbjct: 278 TWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYV 337

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
            R      + +  +L++ Y+K G +  S TIF  M++K +++WN++I  Y+    ++ A+
Sbjct: 338 TRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAI 397

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPMIEHYSAMID 645
            LF ++ +  L P+  T  +++ A  L G++   +++   I    Y    ++   +A++ 
Sbjct: 398 TLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVT--NAVMH 455

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
           +Y R G +  + +  + M  + D   W  ++    IHG   +A+
Sbjct: 456 MYARCGDVVSSRKIFDKMAGK-DVISWNTIIMGYAIHGQGKIAL 498



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 215/458 (46%), Gaps = 41/458 (8%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF---LNLVTEIDVF 92
           G    A+    ++   GA+  R T+  +++ C    ++   R  H+    L LV   +V+
Sbjct: 86  GLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAIRLGLVGS-EVY 144

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
               LL+ YAK G + DA  VF+ M  R++ TW++M+  Y  +      ++ F  M  +G
Sbjct: 145 TGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALALDCFREM-HEG 203

Query: 153 LF--PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           L    D       L AC        G+ +H+ VI+ G+    +V  S+L +Y KCG +  
Sbjct: 204 LQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKVGTSLLDMYCKCGAIAS 263

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT-FNIL----- 264
           A   F +M  +  V WN MI GY   G  +EA   F +M  E  ++ VVT  N+L     
Sbjct: 264 AEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQ 323

Query: 265 ---------IRSYNQLGQC-------DVAMEMVKRMESLGITPDVF---------TWTCM 299
                    +  Y    Q           +EM  ++  +  +  +F         +W  M
Sbjct: 324 TESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNM 383

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I+ +      ++A+ LF E+    + P+  T+++ + A   L  L    ++HS  V++ +
Sbjct: 384 IAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDY 443

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
            ++ LV N++++MY++C ++ ++ ++FD +  KDV SWN++I GY   G    A E+F +
Sbjct: 444 GENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSE 503

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEA---VDLFQR 454
           M+ + + PN  T+  +++    +G  DE     +L QR
Sbjct: 504 MKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQR 541



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 142/296 (47%), Gaps = 12/296 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFV 93
           NG   EA      +  +G +V   T INLL AC  + S    R +H ++     +  V +
Sbjct: 289 NGCPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVL 348

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           +T LL +Y+K G +  +  +F  M  + L +W+ MI AY   + + E + LF  ++   L
Sbjct: 349 ETALLEMYSKVGKVKSSETIFGQMTNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPL 408

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           +PD F    ++ A    G     + MHS +++L       V N+V+ +Y +CG ++ +R+
Sbjct: 409 YPDYFTMSAVVPAFVLLGLLRQCRQMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRK 468

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M  KD ++WN++I GY   G+   A  +F +M    ++    TF  ++ + +  G 
Sbjct: 469 IFDKMAGKDVISWNTIIMGYAIHGQGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGM 528

Query: 274 CD---VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            D   +   +++R    GI P +  + CM     + G      DL + + F+  +P
Sbjct: 529 ADEGWIQFNLMQR--DYGIIPQIEHYGCMTDLLGRAG------DLREVLKFIESIP 576


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 238/763 (31%), Positives = 376/763 (49%), Gaps = 88/763 (11%)

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           E +V    K ++ + + G + DA  +F  M  R+  T++AM+  YS + R      LF  
Sbjct: 35  EPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRA 94

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV-----LAVY 202
           + +    PD++ +  +L A           +  SL    G+     VR+SV     ++ +
Sbjct: 95  IPR----PDNYSYNTLLHALA---------VSSSLADARGLFDEMPVRDSVTYNVMISSH 141

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
              G +  AR +F+   EKD V+WN M++ Y + G  +EA  LF+       +  V+++N
Sbjct: 142 ANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNS----RTEWDVISWN 197

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            L+  Y Q G+   A E+  RM       DV +W  M+SG+A+ G   +A  LF      
Sbjct: 198 ALMSGYVQWGKMSEARELFDRMPGR----DVVSWNIMVSGYARRGDMVEARRLFDAAP-- 251

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
                                                  DV    ++++ Y++   LE A
Sbjct: 252 -------------------------------------VRDVFTWTAVVSGYAQNGMLEEA 274

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
            RVFD + +++  SWN+M+A Y Q     +A ELF  M       NV +WN +++GY Q 
Sbjct: 275 RRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCR----NVASWNTMLTGYAQA 330

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G  +EA  +F  M + D V     SW +++A Y Q G     L +F +M     + N   
Sbjct: 331 GMLEEAKAVFDTMPQKDAV-----SWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSA 385

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
              VL  CA + A     ++HG ++R        V N+L+  Y K GN+  +R  F+ M 
Sbjct: 386 FACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEME 445

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            +D+++WN++I GY  HGF   AL++FD M++   KP+  T + ++ A S +G+V+ G  
Sbjct: 446 ERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGIS 505

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F S+   + +    EHY+ MIDL GR+G+L EA + ++DMP EPDS++W ALL A RIH
Sbjct: 506 YFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIH 565

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
            N +L   A E++F+LEP +  +  L+  IYA  GK  DA K+R +  E   +   G  W
Sbjct: 566 RNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKVPGFSW 625

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKE 793
           IEV+N V+TF  G       + +Y++L    E++  R   +G           +EEEEKE
Sbjct: 626 IEVQNKVHTFSAGDCVHPEKEKIYAFL----EDLDMRMKKAGYVSATDMVLHDVEEEEKE 681

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAK 836
            +   HSEKLA+A+ ++        IR++KN+R+C  CH   K
Sbjct: 682 HMLKYHSEKLAVAYGILNIPPG-RPIRVIKNLRVCGDCHNAFK 723



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 231/486 (47%), Gaps = 30/486 (6%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T L  L  +  L +A  + D +  + +     TY  ++ +  +   + LAR    + +L
Sbjct: 104 NTLLHALAVSSSLADARGLFDEMPVRDSV----TYNVMISSHANHGLVSLARH---YFDL 156

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
             E D      +L+ Y + G +++AR +F    E ++ +W+A++  Y +  +  E  ELF
Sbjct: 157 APEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSGYVQWGKMSEARELF 216

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
             M       D   +  ++      GD  EA +L  +  ++   +       +V++ Y +
Sbjct: 217 DRMPGR----DVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWT-----AVVSGYAQ 267

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CREEIKLGVVTFNI 263
            G L  ARR F++M E++ V+WN+M++ Y Q    DEA  LF+ M CR      V ++N 
Sbjct: 268 NGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRN-----VASWNT 322

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           ++  Y Q G  + A  +   M       D  +W  M++ ++Q G + + L LF EM   G
Sbjct: 323 MLTGYAQAGMLEEAKAVFDTMPQ----KDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCG 378

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
              N       +S C D+ AL  GM++H   ++ G+     VGN+L+ MY KC  +E A 
Sbjct: 379 EWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDAR 438

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
             F+ ++++DV SWN+MIAGY + G+  +A E+F  M+ +   P+ IT   +++    +G
Sbjct: 439 NAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG 498

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
             ++ +  F  M  +  V      +  +I    + G+   A  + + M    F P+    
Sbjct: 499 LVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMP---FEPDSTMW 555

Query: 504 LSVLPA 509
            ++L A
Sbjct: 556 GALLGA 561



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 96/243 (39%), Gaps = 43/243 (17%)

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           LE  +   N  I  + ++G +  +  +F  M  +   T+N+++ GY  +G    A  LF 
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93

Query: 591 QMK----------------SFGLKPNRG-----------TFLSIILAHSLAGMVDLGKKV 623
            +                 S  L   RG           T+  +I +H+  G+V L +  
Sbjct: 94  AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHY 153

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           F    E   +      ++ M+  Y R+G++EEA         E D   W AL++     G
Sbjct: 154 FDLAPEKDAV-----SWNGMLAAYVRNGRVEEARGLFNSR-TEWDVISWNALMSGYVQWG 207

Query: 684 NIDLAVLAIERLFDLEPG-DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
            +  A      LFD  PG DV+   +++  YA  G   D ++ R+L      R+ F   W
Sbjct: 208 KMSEA----RELFDRMPGRDVVSWNIMVSGYARRG---DMVEARRLFDAAPVRDVF--TW 258

Query: 743 IEV 745
             V
Sbjct: 259 TAV 261


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 248/871 (28%), Positives = 427/871 (49%), Gaps = 113/871 (12%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
            LL A +   ++  AR+L   L  +   +V     +L+ YAK G L DA E+F  M  R+
Sbjct: 64  TLLHAYLSCGALSDARRL--LLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARD 121

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMH 180
           + +W+ ++  Y + +++   +E F  M + G  +P+ F     +++CG  G       + 
Sbjct: 122 VASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLL 181

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
           ++V K        V  +++ ++V+CG +  A R F  + E      NSM++GY +    D
Sbjct: 182 AMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVD 241

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            A  LFD M   +    VV++N+++ + +Q G+   A++MV  M+S G+  D  T+    
Sbjct: 242 HALELFDSMPERD----VVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTY---- 293

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
                                          TS+++AC  L +L  G ++H+  ++    
Sbjct: 294 -------------------------------TSSLTACARLSSLRWGKQLHAQVIRNLPH 322

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D  V ++L+ +Y+K    + A+ VF+ + D++  +W  +I+G+ Q G   ++ ELF +M
Sbjct: 323 IDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQM 382

Query: 421 Q-----------------------------------ESDVPPNVITWNVLISGYIQNGNE 445
           +                                   +S     V+  N LIS Y +  N 
Sbjct: 383 RAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNL 442

Query: 446 DEAVDLFQRMGKNDKV--------------------------KRNTASWNSLIAGYQQLG 479
             A  +F+ M + D V                          ++N  +WN+++  Y Q G
Sbjct: 443 QSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHG 502

Query: 480 QKNNALGVFRKMQSSCFY-PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
            + + L +++ M S  +  P+ VT +++   CA L A+    +I G  ++  L     V 
Sbjct: 503 AEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVA 562

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           N++I  Y+K G I+ +R +FD ++ KDI++WN++I GY  HG    A+++FD +   G K
Sbjct: 563 NAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAK 622

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           P+  ++++++   S +G+V  GK  F  +   + I P +EH+S M+DL GR+G L EA +
Sbjct: 623 PDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKD 682

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
            I+DMP++P + +W ALL+AC+IHGN +LA LA + +F+L+  D     L+ +IYA  GK
Sbjct: 683 LIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGK 742

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA 778
            +D+ ++RKL R+   + + G  W+EV N V+ F     S      +   L  + E +  
Sbjct: 743 SDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKI-- 800

Query: 779 RSSHSGLCIEEEEKEEISGIHSEKLALAFALIG-SSQAPHTIRIVKNIRMCVHCHETAKY 837
             +  G    +  + EI   HSEKLA+AF L+   +  P  I I+KN+R+C  CH   K 
Sbjct: 801 --ARLGYVRTDSTRSEIH--HSEKLAVAFGLMTLPTWMP--IHIMKNLRICGDCHTVIKL 854

Query: 838 VSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +S +   E  + D+   HHF  G CSCGDYW
Sbjct: 855 ISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 885



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 225/480 (46%), Gaps = 42/480 (8%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           L  +GR+ EA+ ++  + ++G ++   TY + L AC   +S+   ++LHA  +  +  ID
Sbjct: 265 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHID 324

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            +V + L+ +YAK GC  +A+ VF  + +RN   W+ +I  + +   + E VELF  M  
Sbjct: 325 PYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRA 384

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + +  D F    ++  C +  D   G+ +HSL +K G      V NS++++Y KC  L  
Sbjct: 385 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQS 444

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A   F  M+EKD V+W SMI+ Y Q+G   +A   FD M  +     V+T+N ++ +Y Q
Sbjct: 445 AEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKN----VITWNAMLGAYIQ 500

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G  +  + M K M                                  +S   V P+ VT
Sbjct: 501 HGAEEDGLRMYKVM----------------------------------LSEEYVRPDWVT 526

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
             +    C DL A  +G +I    VK+G   D  V N++I MYSKC  +  A +VFD + 
Sbjct: 527 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN 586

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
            KD+ SWN+MI GY Q G   +A E+F  + +    P+ I++  ++SG   +G   E   
Sbjct: 587 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKF 646

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            F  M +   +      ++ ++    + G    A  +   M      P      ++L AC
Sbjct: 647 YFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMP---MKPTAEVWGALLSAC 703



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 136/571 (23%), Positives = 254/571 (44%), Gaps = 86/571 (15%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           F   L++CG  G     + +H  ++ +G++    ++N++L  Y+ CG L  ARR      
Sbjct: 27  FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLM-- 84

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
                               D AH              V+T N+++  Y +LG+   A+E
Sbjct: 85  --------------------DIAHP------------NVITHNVMLNGYAKLGRLSDAVE 112

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISAC 338
           +  RM +     DV +W  ++SG+ Q+ +   +L+ F  M   G   PN  T+  A+ +C
Sbjct: 113 LFGRMPA----RDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSC 168

Query: 339 TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN 398
             L   ++ +++ ++  K    DD  V  +L++M+ +C  ++ A R+F  IK+       
Sbjct: 169 GALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKE------- 221

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
                                       P +   N +++GY++    D A++LF  M + 
Sbjct: 222 ----------------------------PTMFCRNSMLAGYVKTYGVDHALELFDSMPER 253

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
           D V     SWN +++   Q G+   AL +   MQS     +  T  S L ACA L +   
Sbjct: 254 DVV-----SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRW 308

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
            K++H  V+R        V ++L++ YAKSG    ++ +F+ +  ++ + W  LI G++ 
Sbjct: 309 GKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQ 368

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           +G +  +++LF+QM++  +  ++    ++I        + LG+++     +  QI  ++ 
Sbjct: 369 YGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVV 428

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD- 697
             S +I +Y +   L+ A E I     E D   W +++TA    GN+  A       FD 
Sbjct: 429 SNS-LISMYAKCDNLQSA-EAIFRFMNEKDIVSWTSMITAYSQVGNVAKA----REFFDG 482

Query: 698 LEPGDVLIQRLILQIYAICGKPEDALKVRKL 728
           +   +V+    +L  Y   G  ED L++ K+
Sbjct: 483 MSEKNVITWNAMLGAYIQHGAEEDGLRMYKV 513


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 252/865 (29%), Positives = 405/865 (46%), Gaps = 165/865 (19%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMR--ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           T ++S+Y        A  V   +      ++ W+ +I          +V++L+  M + G
Sbjct: 81  THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 140

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             PD + FP +L+ACG    F                              +CG  + A 
Sbjct: 141 WRPDHYTFPFVLKACGEIPSF------------------------------RCGASVHAV 170

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
            F        G  WN  +                               N L+  Y + G
Sbjct: 171 VF------ASGFEWNVFVG------------------------------NGLVSMYGRCG 194

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF-VGVMPNGVTI 331
             + A ++   M   G+  D+ +W  +++ + Q G + +A+ +F+ M+  +G+ P+ V++
Sbjct: 195 AWENARQVFDEMRERGVG-DLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSL 253

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
            + + AC  + A + G ++H  A++ G  +DV VGN++++MY+KC  +E A +VF+ +K 
Sbjct: 254 VNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKV 313

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP------------------------- 426
           KDV SWN+M+ GY Q G    A  LF K++E  +                          
Sbjct: 314 KDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDV 373

Query: 427 ----------PNVITWNVLISG-------------------YIQNGNEDEA--------- 448
                     PNV+T   L+SG                   +I N +E++          
Sbjct: 374 FRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINA 433

Query: 449 -VDLFQRMGKNDKVK----------RNTASWNSLIAGYQQLGQKNNALGVFRKM-QSSCF 496
            +D++ +       +          R+  +W  LI G  Q G+ N AL +F +M Q   F
Sbjct: 434 LIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNF 493

Query: 497 -YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS-LPVMNSLIDTYAKSGNIVYS 554
             PN  TI   L ACA L A    ++IH  VLR   ES+ L V N LID Y+KSG++  +
Sbjct: 494 VMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAA 553

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           R +FD M  ++ ++W SL+ GY +HG    AL +F +M+   L P+  TF+ ++ A S +
Sbjct: 554 RVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHS 613

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           GMVD G   F  + + + ++P  EHY+ M+DL  R+G+L+EAME I  MP++P  ++W A
Sbjct: 614 GMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVA 673

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           LL+ACR++ N++L   A  +L +LE G+     L+  IYA     +D  ++R L +    
Sbjct: 674 LLSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGI 733

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPENVTARSSHSG 784
           +   G  W++ +    TF  G WS   S  +Y  L++          VP+N  A      
Sbjct: 734 KKRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHD--- 790

Query: 785 LCIEEEEKEEISGIHSEKLALAFALIGSSQ-APHTIRIVKNIRMCVHCHETAKYVSMMHH 843
             +++EEK ++   HSEKLALA+ ++ ++  AP  IRI KN+R C  CH    Y+S++  
Sbjct: 791 --VDDEEKGDLLSEHSEKLALAYGILTTAPGAP--IRITKNLRACGDCHSAFTYISIIIE 846

Query: 844 CEIFLADSKCLHHFKNGQCSCGDYW 868
            EI + DS   HHFKNG CSC  YW
Sbjct: 847 HEIIVRDSSRFHHFKNGSCSCRGYW 871



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 164/540 (30%), Positives = 256/540 (47%), Gaps = 98/540 (18%)

Query: 25  RDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN 84
           R  HL FL       + + +   +   G +    T+  +L+AC +  S      +HA + 
Sbjct: 119 RSVHLGFL------EDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 172

Query: 85  LVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER---NLYTWSAMIGAYSRDQRWRE 140
               E +VFV   L+S+Y +CG  ++AR+VF++MRER   +L +W++++ AY +      
Sbjct: 173 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 232

Query: 141 VVELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
            +++F  M +D G+ PD      +L AC + G +  GK +H   ++ G+     V N+V+
Sbjct: 233 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 292

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +Y KCG +  A + FE M  KD V+WN+M++GY QIG  D+A  LF+K+  E+I+L VV
Sbjct: 293 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 352

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           T++ +I  Y Q G    A+++ ++M   G  P+V T   ++SG                 
Sbjct: 353 TWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSG----------------- 395

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT-------DDVLVGNSLINM 372
                             C     L  G E H  A+K           DD++V N+LI+M
Sbjct: 396 ------------------CASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDM 437

Query: 373 YSKCEELEAAERVFDMI--KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD--VPPN 428
           YSKC+  +AA  +FD+I  KD+ V +W  +I G  Q G   +A ELF +M + D  V PN
Sbjct: 438 YSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPN 497

Query: 429 VIT------------------------------------WNVLISGYIQNGNEDEAVDLF 452
             T                                     N LI  Y ++G+ D A  +F
Sbjct: 498 AFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVF 557

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
             M      +RN  SW SL+ GY   G+   AL +F +MQ     P+ VT + VL AC++
Sbjct: 558 DNMH-----QRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSH 612



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 4/146 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYI--NLLQACIDSNSIHLARKLHAFL--NLVTEID 90
           +G  NEA+ +   +      V  N +     L AC    ++   R++HA++  N      
Sbjct: 474 HGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAM 533

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +FV   L+ +Y+K G +D AR VF++M +RN  +W++++  Y    R  E +++F+ M +
Sbjct: 534 LFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQK 593

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAG 176
             L PD   F  +L AC + G  + G
Sbjct: 594 VXLVPDGVTFVVVLYACSHSGMVDQG 619


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 252/800 (31%), Positives = 388/800 (48%), Gaps = 109/800 (13%)

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA-----------VYVKCGKLIWA 211
           +L++C        GKL+H  ++K    C+ R   + L            +Y+ C +L  A
Sbjct: 15  LLESCIQSKSLFRGKLIHQHLLK----CLHRTHETNLTNFDVPFEKLVDLYIACSELKIA 70

Query: 212 RRFFESMDE--KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-- 267
           R  F+ M    K+ V WN +I  Y   G  +EA  L+ KM    I     TF  ++++  
Sbjct: 71  RHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACS 130

Query: 268 ---------------------------------YNQLGQCDVAMEMVKRMESLGITPDVF 294
                                            Y + G  D A E+  +M       DV 
Sbjct: 131 ALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHK----RDVV 186

Query: 295 TWTCMISGFA-QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            W  MISGF+   G   +   L  +M    V PN  TI   + A   + +L  G EIH  
Sbjct: 187 AWNSMISGFSLHEGSYDEVARLLVQMQ-NDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGF 245

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAGYCQAGYCGK 412
            V+ GF  DV+VG  ++++Y KC+ ++ A R+FDM+   K+  +W++M+  Y    +  +
Sbjct: 246 CVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMRE 305

Query: 413 AYELFIK--MQESDVPP------------------------------------NVITWNV 434
           A ELF +  M + DV                                      +++  N 
Sbjct: 306 ALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNT 365

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           L+S Y + G  + A+  F  M   D V     S+ ++I+GY Q G     L +F +MQ S
Sbjct: 366 LLSMYAKCGIINGAMRFFNEMDLRDAV-----SFTAIISGYVQNGNSEEGLRMFLEMQLS 420

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              P   T+ SVLPACA+L   +     H   +     +   + N+LID YAK G I  +
Sbjct: 421 GINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTA 480

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           R +FD M  + I++WN++I  Y +HG    AL LFD M+S GLKP+  TF+ +I A S +
Sbjct: 481 RKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHS 540

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G+V  GK  F ++T+ + IIP +EHY+ M+DL  R+G  +E   FIE MP+EPD  +W A
Sbjct: 541 GLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGA 600

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           LL+ACR++ N++L     +++  L P       L+  +Y+  G+ +DA +VR  ++E   
Sbjct: 601 LLSACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGF 660

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSE-----SYSDLLYSWLQNVPE-NVTARSSHSGLCIE 788
             S G  WIE+  +V+TF+ GG+         S+ L   L  +      A SS+    +E
Sbjct: 661 EKSPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQDVE 720

Query: 789 EEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFL 848
           EEEKE +   HSEKLA+AF ++  S   H I + KN+R+C  CH   K++S++   +I +
Sbjct: 721 EEEKERVLLYHSEKLAIAFGILSLSPDKHII-VTKNLRVCGDCHTAIKFISLVTKRDITV 779

Query: 849 ADSKCLHHFKNGQCSCGDYW 868
            D+   HHFK+G C+CGD+W
Sbjct: 780 RDASRFHHFKDGICNCGDFW 799



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 150/539 (27%), Positives = 246/539 (45%), Gaps = 89/539 (16%)

Query: 63  LLQACIDSNSIHLARKLHAFL---------NLVTEIDVFVKTKLLSVYAKCGCLDDAREV 113
           LL++CI S S+   + +H  L           +T  DV  + KL+ +Y  C  L  AR V
Sbjct: 15  LLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFE-KLVDLYIACSELKIARHV 73

Query: 114 FEDM--RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG 171
           F+ M  R +N+  W+ +I AY+ +  + E ++L++ M+  G+ P+ F FP +L+AC    
Sbjct: 74  FDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALK 133

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
           +   G+ +H  + +L +     V  +++  Y KCG L  A+  F+ M ++D VAWNSMIS
Sbjct: 134 EASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMIS 193

Query: 232 GY-FQIGENDEAHRLFDKMCREEIKLGVVTFNIL--IRSYNQL----------------- 271
           G+    G  DE  RL  +M  +          +L  +   N L                 
Sbjct: 194 GFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVG 253

Query: 272 ------------GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
                       G+C       +  + +GI  +  TW+ M+  +       +AL+LF ++
Sbjct: 254 DVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQL 313

Query: 320 SFVG---VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
             +    ++ + VT+ + I  C +L  L+ G  +H  A+K GF  D++VGN+L++MY+KC
Sbjct: 314 LMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKC 373

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---- 432
             +  A R F+ +  +D  S+ ++I+GY Q G   +   +F++MQ S + P   T     
Sbjct: 374 GIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVL 433

Query: 433 -------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
                                          N LI  Y + G  D A  +F RM      
Sbjct: 434 PACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMH----- 488

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY--LVASNK 518
           KR   SWN++I  Y   G    AL +F  MQS    P+ VT + ++ AC++  LVA  K
Sbjct: 489 KRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGK 547



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 138/464 (29%), Positives = 216/464 (46%), Gaps = 44/464 (9%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-LVTEIDVFV 93
           NG   EAI +   +   G    R T+  +L+AC         R++H  +  L  E +V+V
Sbjct: 97  NGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYV 156

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+  YAKCGCLDDA+EVF+ M +R++  W++MI  +S  +   + V    + +Q+ +
Sbjct: 157 STALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQNDV 216

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+      +L A         GK +H   ++ G      V   +L VY KC  + +ARR
Sbjct: 217 SPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARR 276

Query: 214 FFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDK--MCREE-IKLGVVTF-------- 261
            F+ M   K+ V W++M+  Y       EA  LF +  M +++ I L  VT         
Sbjct: 277 IFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCA 336

Query: 262 ---------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                                      N L+  Y + G  + AM     M+      D  
Sbjct: 337 NLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMD----LRDAV 392

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           ++T +ISG+ QNG + + L +F EM   G+ P   T+ S + AC  L  L  G   H  A
Sbjct: 393 SFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYA 452

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           +  GFT D ++ N+LI+MY+KC +++ A +VFD +  + + SWN+MI  Y   G   +A 
Sbjct: 453 IICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEAL 512

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
            LF  MQ   + P+ +T+  LIS    +G   E    F  M ++
Sbjct: 513 LLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQD 556



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 167/370 (45%), Gaps = 28/370 (7%)

Query: 24  FRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF- 82
           F    L+  C    L + + VL ++          T   +++ C +   +     LH + 
Sbjct: 302 FMREALELFCQLLMLKDDVIVLSAV----------TLATVIRVCANLTDLSTGTCLHCYA 351

Query: 83  LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
           +     +D+ V   LLS+YAKCG ++ A   F +M  R+  +++A+I  Y ++    E +
Sbjct: 352 IKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGL 411

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
            +F  M   G+ P+      +L AC +      G   H   I  G +    + N+++ +Y
Sbjct: 412 RMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMY 471

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
            KCGK+  AR+ F+ M ++  V+WN+MI  Y   G   EA  LFD M  E +K   VTF 
Sbjct: 472 AKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFI 531

Query: 263 ILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM-S 320
            LI + +  G           M +  GI P +  + CM+   ++ G       LFKE+ S
Sbjct: 532 CLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAG-------LFKEVHS 584

Query: 321 FVGVMP--NGVTITSA-ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSK 375
           F+  MP    V +  A +SAC   K + +G  +     K+G       GN ++  NMYS 
Sbjct: 585 FIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPES---TGNFVLLSNMYSA 641

Query: 376 CEELEAAERV 385
               + A +V
Sbjct: 642 VGRWDDAAQV 651


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 202/580 (34%), Positives = 317/580 (54%), Gaps = 35/580 (6%)

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
           +G+ P+  T    I AC+ L+    G+ IH   VK G+   V + NSLI MY KC++ E 
Sbjct: 4   LGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYEL 63

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM-QESDVPPNVITWNVLI---- 436
           + +VFD + DK+  SW+++I    Q   C + + LF +M  E   P      N +     
Sbjct: 64  SRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMACVRS 123

Query: 437 --------SGYIQNG------NEDEAVDLFQRMGKNDKVKR--------NTASWNSLIAG 474
                      ++NG       +  A  +F R G+ +  ++        +  +W + I  
Sbjct: 124 HEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEA 183

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS 534
           Y +      ALG+ ++M     +P+ +T+L V+ AC+ L +      +HG +      + 
Sbjct: 184 YVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQ 243

Query: 535 L-PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
           L  V  +LID Y K G++ Y+R +FDGM  ++IITW+++I GY +HG+   AL+LFDQMK
Sbjct: 244 LLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQMK 303

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
           +  +KP+  TF+SI+ A S +G+V  G + F S+   + + P  EHY+ M+D+ GR+GKL
Sbjct: 304 A-SVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKL 362

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIY 713
           +EA +FIE MP+ P++++W ALL ACRIH N+DLA +    LFDL+P +     ++  IY
Sbjct: 363 DEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHNAGRYVILYNIY 422

Query: 714 AICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP 773
            + GK ++A  +R L +    +   G   IE+KN +Y FV G  S   +DL+YS L+ + 
Sbjct: 423 TLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQTDLIYSELERLM 482

Query: 774 ENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMC 828
           + +        +      ++EE KE +  +HSEKLA+ F L+        IRI KN+R+C
Sbjct: 483 DRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGS-VIRIRKNLRVC 541

Query: 829 VHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             CH   K++S +   EI + D+   HHFKNG CSC DYW
Sbjct: 542 GDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 187/392 (47%), Gaps = 33/392 (8%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M++ G+ PD+F FP I++AC     FE G  +H  V+K G      + NS++ +Y KC K
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE---EIKLGVVTFNIL 264
              +R+ F+ M +K+ V+W+++I    Q     E   LF +M  E     +  ++     
Sbjct: 61  YELSRQVFDEMPDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSRGAILNAMAC 120

Query: 265 IRS-----------------YNQLGQCDVA--------MEMVKRMESLGITPDVFTWTCM 299
           +RS                 ++Q  Q   A        +E+ +++    ++ D+ TW   
Sbjct: 121 VRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATT 180

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I  + +     +AL L K+M   G+ P+ +T+   I AC+ L +  +   +H +     F
Sbjct: 181 IEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFF 240

Query: 360 TDDVL-VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
            + +L V  +LI++Y KC  L  A +VFD ++++++ +W++MI+GY   G+  +A  LF 
Sbjct: 241 YNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFD 300

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
           +M+ S V P+ IT+  ++S    +G   E  + F  M ++  V      +  ++    + 
Sbjct: 301 QMKAS-VKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRA 359

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           G+ + A     +M      PN     ++L AC
Sbjct: 360 GKLDEACDFIERMPVR---PNAAVWGALLGAC 388



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 180/379 (47%), Gaps = 27/379 (7%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTE----ID 90
           + R  E  ++   + ++G++  R   +N + AC+ S+      +      +V E     D
Sbjct: 89  DDRCKEGFSLFRQMLSEGSRPSRGAILNAM-ACVRSHE-----EADDVYRVVVENGLDFD 142

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
             V++    ++A+CG ++ AR++F+ +  ++L TW+  I AY +     E + L   M+ 
Sbjct: 143 QSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKADMPLEALGLLKQMML 202

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK-LGMSCVRRVRNSVLAVYVKCGKLI 209
            G+FPD      +++AC     F+   ++H ++      + +  V  +++ +YVKCG L 
Sbjct: 203 QGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGSLT 262

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
           +AR+ F+ M E++ + W++MISGY   G   EA  LFD+M +  +K   +TF  ++ + +
Sbjct: 263 YARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQM-KASVKPDHITFVSILSACS 321

Query: 270 QLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
             G      E    M    G+TP    + CM+    + G+  +A D  + M    V PN 
Sbjct: 322 HSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACDFIERMP---VRPNA 378

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS---LINMYSKCEELEAAERV 385
               + + AC     + + +++  +  +  F  D         L N+Y+   + + A+ +
Sbjct: 379 AVWGALLGACR----IHLNVDLAEMVARALFDLDPHNAGRYVILYNIYTLTGKRKEADSI 434

Query: 386 FDMIKDKDVYSWNSMIAGY 404
             ++K++ V      IAGY
Sbjct: 435 RTLMKNRGV----KKIAGY 449



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 206/460 (44%), Gaps = 49/460 (10%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  +++AC          ++H   +    +  VF+   L+++Y KC   + +R+VF++M
Sbjct: 12  TFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDKYELSRQVFDEM 71

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            ++N  +WSA+IGA  +D R +E   LF  M+ +G  P       IL A       E   
Sbjct: 72  PDKNAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR---GAILNAMACVRSHEEAD 128

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            ++ +V++ G+   + V+++   ++ +CG++  AR+ F+ +  KD V W + I  Y +  
Sbjct: 129 DVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKDLVTWATTIEAYVKAD 188

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRS----------------------YNQLGQCD 275
              EA  L  +M  + I    +T   +IR+                      YNQL   +
Sbjct: 189 MPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLAVE 248

Query: 276 VAM-EMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
            A+ ++  +  SL     VF         TW+ MISG+  +G   +AL+LF +M    V 
Sbjct: 249 TALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLFDQMK-ASVK 307

Query: 326 PNGVTITSAISACTDLKALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAE 383
           P+ +T  S +SAC+    +A G E  +S+A   G T        ++++  +  +L EA +
Sbjct: 308 PDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYACMVDILGRAGKLDEACD 367

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
            +  M    +   W +++ G C+        E+  +      P N   + +L + Y   G
Sbjct: 368 FIERMPVRPNAAVWGALL-GACRIHLNVDLAEMVARALFDLDPHNAGRYVILYNIYTLTG 426

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
              EA D  + + KN  VK+        IAGY  +  KN 
Sbjct: 427 KRKEA-DSIRTLMKNRGVKK--------IAGYSVIEIKNK 457


>gi|347954482|gb|AEP33741.1| chlororespiratory reduction 21, partial [Thlaspi arvense]
          Length = 732

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 209/710 (29%), Positives = 378/710 (53%), Gaps = 44/710 (6%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-- 89
           LC +G + EA++++  +  +  ++    Y  +LQ C+   ++   +++HA +    +   
Sbjct: 25  LCKSGEIREALSLVTEMDFRKIRIGPEIYGEILQGCVYKRNLCTGKQIHARILKKGDFYA 84

Query: 90  -DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            + +++TKL+  YAKC  L+ A  +F  +R RN+++W+A+IG   R       +  F  M
Sbjct: 85  RNEYIETKLVIFYAKCDALEIAELLFSKLRVRNVFSWAAIIGVKCRIGLVEGALMGFVEM 144

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           +++G+FPD+F+ P + +ACG       G+ +H  V+K G      V +S+  +Y KCG L
Sbjct: 145 LENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVVKAGFHDCVFVASSLADMYGKCGVL 204

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------- 261
             AR+ F+ + E++ VAWN+++ GY Q G N+EA RLF  M +E ++   VT        
Sbjct: 205 DEARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTCLSAS 264

Query: 262 ------------------------NILIRS----YNQLGQCDVAMEMVKRMESLGITPDV 293
                                   NIL  S    Y ++G  + A  +  RM    +  DV
Sbjct: 265 ANMGGIEEGKQSHAIAVVNGLELDNILGTSILNFYCKVGLIECAEMIFDRM----VEKDV 320

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            TW  +ISG+ Q G    A+ + + M    +  + VT+++ +SA    +   +G E+ S 
Sbjct: 321 VTWNLLISGYVQQGLVEDAIRMCQSMRLENLKFDCVTLSTLMSAAARTQDSKLGKEVQSY 380

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            ++     D+++ ++ ++MY+KC  +  A++VFD    KD+  WN+++  Y ++G  G+A
Sbjct: 381 CIRHSLESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLGAYAESGLSGEA 440

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
             LF +MQ   VPPNVITWN++I   ++NG  +EA ++F +M ++  +  N  SW +++ 
Sbjct: 441 LRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQM-QSSGIIPNLVSWTTMMN 499

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE- 532
           G  Q G    A+   RKMQ S   PN  +I   L ACA L + +  + IHG ++R     
Sbjct: 500 GLVQNGCSEEAILFLRKMQESGLRPNVFSITVALSACANLASLHYGRSIHGYIIRNQRHC 559

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
           SS+ +  SL+D YAK G+I  +  +F      ++  +N++I G+ ++G    A+ L+  +
Sbjct: 560 SSVSIETSLVDMYAKCGDINKAERVFRSKLYSELPLYNAMISGFAVYGNVKEAIGLYRSL 619

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
           +  G+KP+  TF S++ A + AG ++   ++F  +   + + P +EHY  M+DL   +G+
Sbjct: 620 EDMGIKPDSITFTSLLSACNHAGDINQAFEIFTDMVSKHGLKPCLEHYGLMVDLLASAGE 679

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
            ++A+  +E+MP +PD+ + ++L   C+     +L      +L + EP +
Sbjct: 680 TDKALRLMEEMPYKPDARMVQSLFATCKKQHKDELVEYLSRQLLESEPDN 729



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 154/352 (43%), Gaps = 49/352 (13%)

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
           RN  SW ++I    ++G    AL  F +M  +  +P+   + +V  AC  L  S   + +
Sbjct: 116 RNVFSWAAIIGVKCRIGLVEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGV 175

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           HG V++      + V +SL D Y K G +  +R +FD +  ++++ WN+L+ GYV +G  
Sbjct: 176 HGYVVKAGFHDCVFVASSLADMYGKCGVLDEARKVFDEIPERNVVAWNALMVGYVQNGMN 235

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC-SITECYQIIPMIEHYS 641
             A+ LF  M+  G++P R T  + + A +  G ++ GK+    ++    ++  ++   +
Sbjct: 236 EEAIRLFSDMRKEGVEPTRVTVSTCLSASANMGGIEEGKQSHAIAVVNGLELDNILG--T 293

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL----------- 690
           ++++ Y + G +E A E I D  +E D   W  L++     G ++ A+            
Sbjct: 294 SILNFYCKVGLIECA-EMIFDRMVEKDVVTWNLLISGYVQQGLVEDAIRMCQSMRLENLK 352

Query: 691 -----------AIERLFDLEPG--------------DVLIQRLILQIYAICGKPEDALKV 725
                      A  R  D + G              D+++    + +YA CG   DA KV
Sbjct: 353 FDCVTLSTLMSAAARTQDSKLGKEVQSYCIRHSLESDIVLASTAVDMYAKCGSIVDAKKV 412

Query: 726 RKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW-LQNVPENV 776
                     ++  +  I    L+  +   G S     L Y   L++VP NV
Sbjct: 413 FD--------STVQKDLILWNTLLGAYAESGLSGEALRLFYEMQLESVPPNV 456



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 98/229 (42%), Gaps = 6/229 (2%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--N 84
           T ++ L  NG   EAI  L  +   G +    +    L AC +  S+H  R +H ++  N
Sbjct: 496 TMMNGLVQNGCSEEAILFLRKMQESGLRPNVFSITVALSACANLASLHYGRSIHGYIIRN 555

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
                 V ++T L+ +YAKCG ++ A  VF       L  ++AMI  ++     +E + L
Sbjct: 556 QRHCSSVSIETSLVDMYAKCGDINKAERVFRSKLYSELPLYNAMISGFAVYGNVKEAIGL 615

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           +  +   G+ PD   F  +L AC + GD  +A ++   +V K G+         ++ +  
Sbjct: 616 YRSLEDMGIKPDSITFTSLLSACNHAGDINQAFEIFTDMVSKHGLKPCLEHYGLMVDLLA 675

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
             G+   A R  E M  K       M+   F   +      L + + R+
Sbjct: 676 SAGETDKALRLMEEMPYKPDA---RMVQSLFATCKKQHKDELVEYLSRQ 721


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 245/775 (31%), Positives = 387/775 (49%), Gaps = 85/775 (10%)

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
           +C +    K +H+L++ LG +    +   ++ +Y   G L  +   F+ +  K+  +WNS
Sbjct: 60  SCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNS 119

Query: 229 MISGYFQIGENDEAHRLF-----------------------------DKMCREEIKLG-- 257
           M+S Y + G   ++                                 +KM    +K+G  
Sbjct: 120 MVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGEKMHCWVLKMGFE 179

Query: 258 --VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             V     LI  Y++ G  +VA ++   M       DV +W  MISGF QNG  ++AL +
Sbjct: 180 HDVYVAASLIHLYSRFGAVEVAHKVFVDMP----VRDVGSWNAMISGFCQNGNVAEALRV 235

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
              M    V  + VT++S +  C     +  G+ +H   +K G   DV V N+LINMYSK
Sbjct: 236 LDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSK 295

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT---- 431
              L+ A+RVFD ++ +D+ SWNS+IA Y Q      A   F +M    + P+++T    
Sbjct: 296 FGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSL 355

Query: 432 ------------------------W--------NVLISGYIQNGNEDEAVDLFQRMGKND 459
                                   W        N L++ Y + G+ D A  +F+++   D
Sbjct: 356 ASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSRD 415

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS-CFYPNCVTILSVLPACAYLVASNK 518
            +     SWN+LI GY Q G  + A+  +  M+      PN  T +S+LPA +++ A  +
Sbjct: 416 VI-----SWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQ 470

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
             +IHG +++  L   + V   LID Y K G +  + ++F  +  +  + WN++I    +
Sbjct: 471 GMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGI 530

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           HG    AL LF  M++ G+K +  TF+S++ A S +G+VD  +  F ++ + Y+I P ++
Sbjct: 531 HGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLK 590

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
           HY  M+DL+GR+G LE+A   + +MPI+ D+SIW  LL ACRIHGN +L   A +RL ++
Sbjct: 591 HYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEV 650

Query: 699 EPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS 758
           +  +V    L+  IYA  GK E A+KVR L R+   R + G   + V ++V  F  G  S
Sbjct: 651 DSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYAGNQS 710

Query: 759 ESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSS 813
                 +Y  L+ +   + +             +EE+EKEEI   HSE+LA+ F +I S+
Sbjct: 711 HPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGII-ST 769

Query: 814 QAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
                IRI KN+R+C  CH   KY+S +   EI + DS   HHFK+G CSCGDYW
Sbjct: 770 PPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 157/587 (26%), Positives = 280/587 (47%), Gaps = 90/587 (15%)

Query: 71  NSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMI 129
            +I++A++LHA L ++ +  DV + T+L+++YA  G L  +   F+ ++ +N+++W++M+
Sbjct: 62  TNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMV 121

Query: 130 GAYSRDQRWRE----VVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK 185
            AY R  R+R+    V EL  L    G+ PD + FP +L+AC +  D   G+ MH  V+K
Sbjct: 122 SAYVRRGRYRDSMDCVTELLSL---SGVRPDFYTFPPVLKACLSLAD---GEKMHCWVLK 175

Query: 186 LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRL 245
           +G      V  S++ +Y + G +  A + F  M  +D  +WN+MISG+ Q G   EA R+
Sbjct: 176 MGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRV 235

Query: 246 FDKMCREEIKLGVVTF-----------------------------------NILIRSYNQ 270
            D+M  EE+K+  VT                                    N LI  Y++
Sbjct: 236 LDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSK 295

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G+   A  +   ME      D+ +W  +I+ + QN     AL  FKEM FVG+ P+ +T
Sbjct: 296 FGRLQDAQRVFDGME----VRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLT 351

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTD-DVLVGNSLINMYSKCEELEAAERVFDMI 389
           + S  S    L    +G  +H   V+  + + D+++GN+L+NMY+K   ++ A  VF+ +
Sbjct: 352 VVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQL 411

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES-DVPPNVITWNVLISGYIQNGNEDEA 448
             +DV SWN++I GY Q G   +A + +  M+E   + PN  TW  ++  Y   G   + 
Sbjct: 412 PSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQG 471

Query: 449 VDLFQRMGKN------------------------------DKVKRNTASWNSLIAGYQQL 478
           + +  R+ KN                              +  +  +  WN++I+     
Sbjct: 472 MKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIH 531

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC--VLRRS--LESS 534
           G    AL +F+ M++     + +T +S+L AC++   S  V E   C   +++   ++ +
Sbjct: 532 GHGEKALQLFKDMRADGVKADHITFVSLLSACSH---SGLVDEAQWCFDTMQKEYRIKPN 588

Query: 535 LPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
           L     ++D + ++G +  +  +   M    D   W +L+    +HG
Sbjct: 589 LKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHG 635



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 235/496 (47%), Gaps = 48/496 (9%)

Query: 36  GRLNEAIT-VLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           GR  +++  V + ++  G +    T+  +L+AC+   S+    K+H + L +  E DV+V
Sbjct: 128 GRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACL---SLADGEKMHCWVLKMGFEHDVYV 184

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y++ G ++ A +VF DM  R++ +W+AMI  + ++    E + +   M  + +
Sbjct: 185 AASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEV 244

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             D      +L  C    D   G L+H  VIK G+     V N+++ +Y K G+L  A+R
Sbjct: 245 KMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQR 304

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------------ 249
            F+ M+ +D V+WNS+I+ Y Q  +   A   F +M                        
Sbjct: 305 VFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSD 364

Query: 250 -------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                        CR  +++ +V  N L+  Y +LG  D A  + +++ S     DV +W
Sbjct: 365 RRIGRAVHGFVVRCR-WLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPS----RDVISW 419

Query: 297 TCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
             +I+G+AQNG  S+A+D +  M     ++PN  T  S + A + + AL  GM+IH   +
Sbjct: 420 NTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLI 479

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K     DV V   LI+MY KC  LE A  +F  I  +    WN++I+     G+  KA +
Sbjct: 480 KNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIHGHGEKALQ 539

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           LF  M+   V  + IT+  L+S    +G  DEA   F  M K  ++K N   +  ++  +
Sbjct: 540 LFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLF 599

Query: 476 QQLGQKNNALGVFRKM 491
            + G    A  +   M
Sbjct: 600 GRAGYLEKAYNLVSNM 615



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 221/468 (47%), Gaps = 25/468 (5%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
            C NG + EA+ VLD + T+  K+   T  ++L  C  SN +     +H + +    E D
Sbjct: 223 FCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESD 282

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           VFV   L+++Y+K G L DA+ VF+ M  R+L +W+++I AY ++      +  F  M+ 
Sbjct: 283 VFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLF 342

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK---LGMSCVRRVRNSVLAVYVKCGK 207
            G+ PD      +    G   D   G+ +H  V++   L +  V  + N+++ +Y K G 
Sbjct: 343 VGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIV--IGNALVNMYAKLGS 400

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV---TFNIL 264
           +  AR  FE +  +D ++WN++I+GY Q G   EA   ++ M  EE +  V    T+  +
Sbjct: 401 IDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMM--EEGRTIVPNQGTWVSI 458

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
           + +Y+ +G     M++  R+    +  DVF  TC+I  + + GR   A+ LF E+     
Sbjct: 459 LPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETS 518

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
           +P    I+S        KAL +  ++ +  VK     D +   SL++  S    ++ A+ 
Sbjct: 519 VPWNAIISSLGIHGHGEKALQLFKDMRADGVKA----DHITFVSLLSACSHSGLVDEAQW 574

Query: 385 VFDMIKDK-----DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
            FD ++ +     ++  +  M+  + +AGY  KAY L   M    +  +   W  L++  
Sbjct: 575 CFDTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMP---IQADASIWGTLLAAC 631

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
             +GN +       R+ + D    N   +  L   Y  +G+   A+ V
Sbjct: 632 RIHGNAELGTFASDRLLEVD--SENVGYYVLLSNIYANVGKWEGAVKV 677


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 248/871 (28%), Positives = 427/871 (49%), Gaps = 113/871 (12%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
            LL A +   ++  AR+L   L  +   +V     +L+ YAK G L DA E+F  M  R+
Sbjct: 44  TLLHAYLSCGALSDARRL--LLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARD 101

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMH 180
           + +W+ ++  Y + +++   +E F  M + G  +P+ F     +++CG  G       + 
Sbjct: 102 VASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLL 161

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
           ++V K        V  +++ ++V+CG +  A R F  + E      NSM++GY +    D
Sbjct: 162 AMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVD 221

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            A  LFD M   +    VV++N+++ + +Q G+   A++MV  M+S G+  D  T+    
Sbjct: 222 HALELFDSMPERD----VVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTY---- 273

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
                                          TS+++AC  L +L  G ++H+  ++    
Sbjct: 274 -------------------------------TSSLTACARLSSLRWGKQLHAQVIRNLPH 302

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D  V ++L+ +Y+K    + A+ VF+ + D++  +W  +I+G+ Q G   ++ ELF +M
Sbjct: 303 IDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQM 362

Query: 421 Q-----------------------------------ESDVPPNVITWNVLISGYIQNGNE 445
           +                                   +S     V+  N LIS Y +  N 
Sbjct: 363 RAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNL 422

Query: 446 DEAVDLFQRMGKNDKV--------------------------KRNTASWNSLIAGYQQLG 479
             A  +F+ M + D V                          ++N  +WN+++  Y Q G
Sbjct: 423 QSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHG 482

Query: 480 QKNNALGVFRKMQSSCFY-PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
            + + L +++ M S  +  P+ VT +++   CA L A+    +I G  ++  L     V 
Sbjct: 483 AEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVA 542

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           N++I  Y+K G I+ +R +FD ++ KDI++WN++I GY  HG    A+++FD +   G K
Sbjct: 543 NAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAK 602

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           P+  ++++++   S +G+V  GK  F  +   + I P +EH+S M+DL GR+G L EA +
Sbjct: 603 PDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKD 662

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
            I+DMP++P + +W ALL+AC+IHGN +LA LA + +F+L+  D     L+ +IYA  GK
Sbjct: 663 LIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMAKIYADAGK 722

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA 778
            +D+ ++RKL R+   + + G  W+EV N V+ F     S      +   L  + E +  
Sbjct: 723 SDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIRKKLDELMEKI-- 780

Query: 779 RSSHSGLCIEEEEKEEISGIHSEKLALAFALIG-SSQAPHTIRIVKNIRMCVHCHETAKY 837
             +  G    +  + EI   HSEKLA+AF L+   +  P  I I+KN+R+C  CH   K 
Sbjct: 781 --ARLGYVRTDSTRSEIH--HSEKLAVAFGLMTLPTWMP--IHIMKNLRICGDCHTVIKL 834

Query: 838 VSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +S +   E  + D+   HHF  G CSCGDYW
Sbjct: 835 ISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 232/492 (47%), Gaps = 43/492 (8%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           L  +GR+ EA+ ++  + ++G ++   TY + L AC   +S+   ++LHA  +  +  ID
Sbjct: 245 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHID 304

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            +V + L+ +YAK GC  +A+ VF  + +RN   W+ +I  + +   + E VELF  M  
Sbjct: 305 PYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRA 364

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + +  D F    ++  C +  D   G+ +HSL +K G      V NS++++Y KC  L  
Sbjct: 365 ELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQS 424

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A   F  M+EKD V+W SMI+ Y Q+G   +A   FD M  +     V+T+N ++ +Y Q
Sbjct: 425 AEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKN----VITWNAMLGAYIQ 480

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G  +  + M K M                                  +S   V P+ VT
Sbjct: 481 HGAEEDGLRMYKVM----------------------------------LSEEYVRPDWVT 506

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
             +    C DL A  +G +I    VK+G   D  V N++I MYSKC  +  A +VFD + 
Sbjct: 507 YVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN 566

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
            KD+ SWN+MI GY Q G   +A E+F  + +    P+ I++  ++SG   +G   E   
Sbjct: 567 VKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKF 626

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            F  M +   +      ++ ++    + G    A  +   M      P      ++L AC
Sbjct: 627 YFDMMKRAHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDDMP---MKPTAEVWGALLSAC 683

Query: 511 AYLVASNKVKEI 522
             +  +N++ E+
Sbjct: 684 K-IHGNNELAEL 694



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 136/571 (23%), Positives = 254/571 (44%), Gaps = 86/571 (15%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           F   L++CG  G     + +H  ++ +G++    ++N++L  Y+ CG L  ARR      
Sbjct: 7   FADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLM-- 64

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
                               D AH              V+T N+++  Y +LG+   A+E
Sbjct: 65  --------------------DIAHP------------NVITHNVMLNGYAKLGRLSDAVE 92

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISAC 338
           +  RM +     DV +W  ++SG+ Q+ +   +L+ F  M   G   PN  T+  A+ +C
Sbjct: 93  LFGRMPA----RDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSC 148

Query: 339 TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN 398
             L   ++ +++ ++  K    DD  V  +L++M+ +C  ++ A R+F  IK+       
Sbjct: 149 GALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKE------- 201

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
                                       P +   N +++GY++    D A++LF  M + 
Sbjct: 202 ----------------------------PTMFCRNSMLAGYVKTYGVDHALELFDSMPER 233

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
           D V     SWN +++   Q G+   AL +   MQS     +  T  S L ACA L +   
Sbjct: 234 DVV-----SWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRW 288

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
            K++H  V+R        V ++L++ YAKSG    ++ +F+ +  ++ + W  LI G++ 
Sbjct: 289 GKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQ 348

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           +G +  +++LF+QM++  +  ++    ++I        + LG+++     +  QI  ++ 
Sbjct: 349 YGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVV 408

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD- 697
             S +I +Y +   L+ A E I     E D   W +++TA    GN+  A       FD 
Sbjct: 409 SNS-LISMYAKCDNLQSA-EAIFRFMNEKDIVSWTSMITAYSQVGNVAKA----REFFDG 462

Query: 698 LEPGDVLIQRLILQIYAICGKPEDALKVRKL 728
           +   +V+    +L  Y   G  ED L++ K+
Sbjct: 463 MSEKNVITWNAMLGAYIQHGAEEDGLRMYKV 493


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  369 bits (948), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 236/788 (29%), Positives = 391/788 (49%), Gaps = 83/788 (10%)

Query: 156  DDFLFPKILQACGNCGDFEAGKLMHSLVIKLG------MSCVRRVRNSVLAVYVKCGKLI 209
            D + + ++LQ C   GD   G+ +H  V++ G      + C     N +L +Y K G   
Sbjct: 427  DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCA----NVLLNMYTKVGPFG 482

Query: 210  WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE--EIKLGVVTFNI-LIR 266
             A R F+ + E++ V++ +++ G+   GE +EA  LF ++  E  E+   V+T  + L+ 
Sbjct: 483  SAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVV 542

Query: 267  SYNQLG-----------------------------QCDVAMEMVKRMESLGITPDVFTWT 297
            + + LG                              C V  +  +  + + +  D   WT
Sbjct: 543  AMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGI-VGKDAVAWT 601

Query: 298  CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
             M+S +++N      L +F +M       N   +TS + A   L ++ +G  IH+ +VK 
Sbjct: 602  AMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKT 661

Query: 358  GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
             +  +  V  +L++MY+KC  +E A   F+M+ + DV  W+ MI+ Y Q     +A+ELF
Sbjct: 662  LYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELF 721

Query: 418  IKMQESDVPPNVITWNVLISG----------------YIQNGNEDEA------VDLFQRM 455
            I+M  S V PN  + + ++                   I+ G+E E       +DL+ + 
Sbjct: 722  IRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKC 781

Query: 456  GKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
               +            N  SWN++I GY + G    AL VFR+M+++      VT  SVL
Sbjct: 782  SDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVL 841

Query: 508  PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
             ACA   + N V ++H  + + +  S   V NSLID+YAK G I  +R IF+ +   D++
Sbjct: 842  RACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLV 901

Query: 568  TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
            +WN++I GY +HG    A +LFD M    +K N  TF++++      G+V  G  +F S+
Sbjct: 902  SWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSM 961

Query: 628  TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
               + I P +EHY+ ++ L GR+G+L +A+ FI D+P  P + +W ALL++C +H N++L
Sbjct: 962  RLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVEL 1021

Query: 688  AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
               + E++ ++EP D     L+  +Y+  G  +     RK  R    R   G  W+E+K 
Sbjct: 1022 GRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKG 1081

Query: 748  LVYTFVTGGWSESYS-----DLLYSW--LQNVPENVTARSSHSGLCIEEEEKEEISGIHS 800
             V+ F  G  SE +      + +  W  L+ + E     +      +EEE+K  +  +HS
Sbjct: 1082 EVHAFSVG--SEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLWVHS 1139

Query: 801  EKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNG 860
            E+LALA+ L+ +    H IRI+KN+R C+ CH   K +S +   EI + D    HHF+ G
Sbjct: 1140 ERLALAYGLVMTPPG-HPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFEEG 1198

Query: 861  QCSCGDYW 868
             CSCGDYW
Sbjct: 1199 TCSCGDYW 1206



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 169/688 (24%), Positives = 300/688 (43%), Gaps = 98/688 (14%)

Query: 10   QQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACID 69
            ++LHS    ++ PR RD     L  N  L      L S+A     V    Y  LLQ C+ 
Sbjct: 386  RRLHSAFFNQAPPRRRD-----LAANAALQWLEDELTSLAFPWPGVDSYAYARLLQGCVA 440

Query: 70   SNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWS 126
                   R +H  +     +  +D+F    LL++Y K G    A  VF+ + ERN+ ++ 
Sbjct: 441  RGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFV 500

Query: 127  AMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL 186
             ++  ++    + E   LF  +  +G   + F+   +L+             +H+   KL
Sbjct: 501  TLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKL 560

Query: 187  GMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF 246
            G      V ++++  Y  CG +  ARR F+ +  KD VAW +M+S Y +    +   ++F
Sbjct: 561  GHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIF 620

Query: 247  DKM--------------------CREEIKLG-------VVT--------FNILIRSYNQL 271
             KM                    C   + LG       V T        +  L+  Y + 
Sbjct: 621  SKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKC 680

Query: 272  GQCD---VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
            G  +   +A EMV          DV  W+ MIS +AQ  +  QA +LF  M    V PN 
Sbjct: 681  GNIEDARLAFEMVT-------NDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNE 733

Query: 329  VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
             +++S + AC ++  L +G +IH+ A+K+G   ++ VGN+LI++Y+KC ++E++  +F  
Sbjct: 734  FSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSS 793

Query: 389  IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---------------- 432
            ++D +  SWN++I GY ++G+   A  +F +M+ + VP   +T+                
Sbjct: 794  LRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHV 853

Query: 433  -------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
                               N LI  Y + G   +A ++F+ + + D V     SWN++I+
Sbjct: 854  GQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLV-----SWNAIIS 908

Query: 474  GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLE 532
            GY   GQ   A  +F  M  +    N +T +++L  C    + S  +       L   +E
Sbjct: 909  GYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIE 968

Query: 533  SSLPVMNSLIDTYAKSGNIVYSRT-IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
             S+     ++    ++G +  +   I D  S+   + W +L+   ++H   +  L  F  
Sbjct: 969  PSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHK--NVELGRFSA 1026

Query: 592  MKSFGLKP-NRGTFLSIILAHSLAGMVD 618
             K   ++P +  T++ +   +S AG +D
Sbjct: 1027 EKVLEIEPQDETTYVLLSNMYSAAGSLD 1054



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/454 (23%), Positives = 207/454 (45%), Gaps = 43/454 (9%)

Query: 53   AKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAR 111
            +K+      ++L+A +  +S+ L + +HA  +  + + +  V   LL +YAKCG ++DAR
Sbjct: 628  SKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDAR 687

Query: 112  EVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG 171
              FE +   ++  WS MI  Y++  +  +  ELF  M++  + P++F    +LQAC N  
Sbjct: 688  LAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMP 747

Query: 172  DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
              + GK +H+  IK+G      V N+++ +Y KC  +  +   F S+ + + V+WN++I 
Sbjct: 748  LLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIV 807

Query: 232  GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR------SYNQLGQ------------ 273
            GY + G  + A  +F +M    +    VT++ ++R      S N +GQ            
Sbjct: 808  GYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHCLIEKSTFNS 867

Query: 274  --------------CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
                          C    +  +  E+L    D+ +W  +ISG+A +G+ + A +LF  M
Sbjct: 868  DTIVSNSLIDSYAKCGCIRDAREIFETLKEC-DLVSWNAIISGYAVHGQAAMAQELFDMM 926

Query: 320  SFVGVMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEE 378
            S   +  N +T  + +S C     ++ G+ +  S+ +  G    +     ++ +  +   
Sbjct: 927  SKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIVRLLGRAGR 986

Query: 379  L-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL--FIKMQESDVPPNVITWNVL 435
            L +A   + D+        W ++++    +    K  EL  F   +  ++ P   T  VL
Sbjct: 987  LNDALNFIGDIPSAPSAMVWRALLS----SCIVHKNVELGRFSAEKVLEIEPQDETTYVL 1042

Query: 436  ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
            +S         + V  F++  +N  V++    SW
Sbjct: 1043 LSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSW 1076


>gi|296086269|emb|CBI31710.3| unnamed protein product [Vitis vinifera]
          Length = 649

 Score =  369 bits (946), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 211/585 (36%), Positives = 326/585 (55%), Gaps = 26/585 (4%)

Query: 299 MISGFAQNGRTSQALDLFK-------EMSFVGVMPNGVTI--TSAISACTDLKALAMGME 349
           ++SGF  +   +  ++L+          S     PN   I   S I A T  K     +E
Sbjct: 76  IVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALE 135

Query: 350 IHSLAV-KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           ++   V K G   DV +G  L++MYSK  +L+ A  VFD +  +DV +WN+MIAG  Q+ 
Sbjct: 136 MYYCMVEKGGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSE 195

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
               A  +F +M + D     ++W  +++GY  NG   E ++LF      DK+K    +W
Sbjct: 196 DPYVARRVFDQMVDQDD----VSWGTMMAGYAHNGCFVEVLELF------DKMKLGNVTW 245

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           N +IA Y Q G    A+  F +M+   F+PN VT +SVLPA AYL A  +    H C+++
Sbjct: 246 NVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQ 305

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
               S+  V NSLID YAK G + YS  +F+ M  KD ++WN+++ GY +HG    A+ L
Sbjct: 306 MGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIAL 365

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F  M+   ++ +  +F+S++ A   AG+V+ G+K+F S+++ Y I P +EHY+ M+DL G
Sbjct: 366 FSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLG 425

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+G  +E + FI+ MP+EPD+ +W ALL +CR+H N+ L  +A++ L  LEP +     +
Sbjct: 426 RAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVV 485

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD---LL 765
           +  IYA  G+  DA K R    +   + + G  W+E+KN V+ F  G  S    +   LL
Sbjct: 486 LSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLL 545

Query: 766 YSWLQNVPENVTARSSHSGLC--IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
           ++ L    E +      S +   +EEE+KE     HSE+LA+ FAL+ +     TI+IVK
Sbjct: 546 WNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGS-TIQIVK 604

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+R+C  CH T K++S +    I + D+   HHF++G CSC DYW
Sbjct: 605 NLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 649



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 222/466 (47%), Gaps = 52/466 (11%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYIN------LLQACIDSNSIHLARKLHAFLNL 85
           +C   +L  + T + + A++   +  +TY N      LL +C   N +    ++HA + +
Sbjct: 21  MCIKHQLRRSFTSIATAASEFPSLSSSTYTNYLHYPRLLSSCKHLNPL---LQIHAQIIV 77

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
                    T L+++Y+     D AR VF+     +   W++MI AY+R +++ E +E++
Sbjct: 78  SGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMY 137

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
           + MV                        E G L   + I  G+          + +Y K 
Sbjct: 138 YCMV------------------------EKGGLERDVFIGAGL----------VDMYSKM 163

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G L  AR  F+ M ++D VAWN+MI+G  Q  +   A R+FD+M  ++     V++  ++
Sbjct: 164 GDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQMVDQDD----VSWGTMM 219

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             Y   G     +E+  +M+   +T     W  +I+ + QNG   +A+  F +M      
Sbjct: 220 AGYAHNGCFVEVLELFDKMKLGNVT-----WNVIIAAYMQNGHAKEAISSFHQMRLENFH 274

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           PN VT  S + A   L A   GM  H+  ++MGF  + LVGNSLI+MY+KC +L+ +E++
Sbjct: 275 PNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKL 334

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
           F+ +  KD  SWN+M++GY   G+  +A  LF  MQES V  + +++  ++S     G  
Sbjct: 335 FNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLV 394

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           +E   +F  M     +K +   +  ++    + G  +  LG  + M
Sbjct: 395 EEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVM 440



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 130/302 (43%), Gaps = 70/302 (23%)

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR------------- 134
           E DVF+   L+ +Y+K G L  AREVF+ M +R++  W+AMI   S+             
Sbjct: 147 ERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPYVARRVFDQ 206

Query: 135 -----DQRWR-------------EVVELFFLM--------------VQDG---------- 152
                D  W              EV+ELF  M              +Q+G          
Sbjct: 207 MVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVTWNVIIAAYMQNGHAKEAISSFH 266

Query: 153 ------LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
                   P+   F  +L A      F  G   H+ +I++G      V NS++ +Y KCG
Sbjct: 267 QMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCG 326

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           +L ++ + F  MD KD V+WN+M+SGY   G  D A  LF  M   ++++  V+F  ++ 
Sbjct: 327 QLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLS 386

Query: 267 SYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE-MSFVGV 324
           +    G  +   ++   M +   I PD+  + CM+    + G       LF E + F+ V
Sbjct: 387 ACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAG-------LFDETLGFIKV 439

Query: 325 MP 326
           MP
Sbjct: 440 MP 441



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 74/186 (39%), Gaps = 40/186 (21%)

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
           SS  Y N +    +L +C +L   N + +IH  ++    +    + + LI+ Y+      
Sbjct: 45  SSSTYTNYLHYPRLLSSCKHL---NPLLQIHAQIIVSGFKHHHSITH-LINLYSLFHKCD 100

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            +R++FD   +   I WNS+I  Y     ++ AL+++  M   G                
Sbjct: 101 LARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKG---------------- 144

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
                 L + VF                + ++D+Y + G L+ A E  + MP + D   W
Sbjct: 145 -----GLERDVFIG--------------AGLVDMYSKMGDLKRAREVFDKMP-KRDVVAW 184

Query: 673 EALLTA 678
            A++  
Sbjct: 185 NAMIAG 190


>gi|347954454|gb|AEP33727.1| chlororespiratory reduction 21 [Arabis hirsuta]
          Length = 824

 Score =  368 bits (945), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 224/766 (29%), Positives = 401/766 (52%), Gaps = 48/766 (6%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-- 89
           LC NG + EA++++  +  +  ++    +  +LQ C+    +   +++HA +    +   
Sbjct: 37  LCKNGEIREALSLVTEMDFRNLRIGPEIFGEILQGCVYXRDLRTGQQIHARILKNGDFYA 96

Query: 90  -DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            + +++TKL+  YAKC  L+ A  +F  +R RN+++W+A+IG   R       +  F  M
Sbjct: 97  RNEYIETKLVIFYAKCDALEVAEVLFSKLRVRNVFSWAAIIGVKCRIGLVEGALMGFVEM 156

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           +++G+FPD+F+ P + +ACG       G+ +H  V K G+     V +S+  +Y KCG L
Sbjct: 157 LENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCGVL 216

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------- 261
             AR+ F+ + E++ VAWN+++ GY Q G N+EA RL   M +E ++   VT        
Sbjct: 217 DDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGVEPTRVTVSTCLSAS 276

Query: 262 ------------------------NILIRS----YNQLGQCDVAMEMVKRMESLGITPDV 293
                                   NIL  S    Y ++G  D A  +  RM    I  DV
Sbjct: 277 ANMRGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIDYAEMIFDRM----IEKDV 332

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            TW  +ISG+   G    A+ + + M    +  + VT+++ +SA    + L +G E+   
Sbjct: 333 VTWNLLISGYVHQGLVENAIYMCQLMRLENLKFDCVTLSTLMSAAARTQNLKLGKEVQCY 392

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            ++  F  D+++ ++ ++MY+KC  +  A++VFD    KD+  WN+++A Y ++G  G+A
Sbjct: 393 CIRHSFESDIVLASTAVDMYAKCGSVVDAKKVFDSTVQKDLILWNTLLAAYAESGLSGEA 452

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
             LF +MQ   VPPNVITWN++I   ++NG  +EA ++F +M ++     N  SW +++ 
Sbjct: 453 LRLFYEMQLESVPPNVITWNLIILSLLRNGQVNEAKEMFLQM-QSSGTFPNMISWTTMMN 511

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR-RSLE 532
           G  Q G    A+   RKMQ S   PN  +I   L AC  L + +  + IHG ++R +   
Sbjct: 512 GLVQNGCSEEAILFLRKMQESGMRPNVFSITVALSACVNLASLHFGRSIHGYIIRNQQHS 571

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
           SS  +  SL+D YAK G+I  +  +F      ++  +N++I  Y L+G    A+ L+  +
Sbjct: 572 SSASIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAVALYRSL 631

Query: 593 KS-FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           +   G+KP+  T  +++ A + AG ++   ++F  +   + + P +EHY  M+DL   +G
Sbjct: 632 EEDVGIKPDNITITNVLSACNHAGDINQAIEIFTDMVSKHGMKPCLEHYGLMVDLLASAG 691

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN-IDLAVLAIERLFDLEPGDVLIQRLIL 710
           + E+A+  IE+MP +PD+ + ++L+ +C+   +  +L      +L + EP +      + 
Sbjct: 692 ETEKALSLIEEMPYKPDARMIQSLVASCKKQQHKSELMDYLSSQLLESEPENSGNYVRVS 751

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL--VYTFVT 754
             YA+ G  ++ +K+R++ +    +   G  WI+VK    V+ FV 
Sbjct: 752 NAYAVEGSWDEVVKMREMMKVKGLKKKPGCSWIQVKGEEGVHVFVA 797



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 206/461 (44%), Gaps = 49/461 (10%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            P   ++   +S   +NG   +AL L  EM F  +          +  C   + L  G +
Sbjct: 24  NPSSTSYFHRVSSLCKNGEIREALSLVTEMDFRNLRIGPEIFGEILQGCVYXRDLRTGQQ 83

Query: 350 IHSLAVKMG--FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
           IH+  +K G  +  +  +   L+  Y+KC+ LE AE +F  ++ ++V+SW ++I   C+ 
Sbjct: 84  IHARILKNGDFYARNEYIETKLVIFYAKCDALEVAEVLFSKLRVRNVFSWAAIIGVKCRI 143

Query: 408 GYCGKAYELFIKMQESDV-PPNVITWNVL--------------ISGYIQNGNEDEAV--- 449
           G    A   F++M E+ + P N +  NV               + GY+      + V   
Sbjct: 144 GLVEGALMGFVEMLENGIFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVA 203

Query: 450 ----DLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
               D++ + G  D  +        RN  +WN+L+ GY Q G    A+ +   M+     
Sbjct: 204 SSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGVE 263

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P  VT+ + L A A +    + K+ H   +   LE    +  S+++ Y K G I Y+  I
Sbjct: 264 PTRVTVSTCLSASANMRGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIDYAEMI 323

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           FD M  KD++TWN LI GYV  G    A+ +   M+   LK +  T  +++ A +    +
Sbjct: 324 FDRMIEKDVVTWNLLISGYVHQGLVENAIYMCQLMRLENLKFDCVTLSTLMSAAARTQNL 383

Query: 618 DLGKKVFCSITECYQIIPMIEH----YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
            LGK+V     +CY I    E      S  +D+Y + G + +A +   D  ++ D  +W 
Sbjct: 384 KLGKEV-----QCYCIRHSFESDIVLASTAVDMYAKCGSVVDAKKVF-DSTVQKDLILWN 437

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLE----PGDVLIQRLIL 710
            LL A    G   L+  A+   ++++    P +V+   LI+
Sbjct: 438 TLLAAYAESG---LSGEALRLFYEMQLESVPPNVITWNLII 475



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 82/166 (49%), Gaps = 4/166 (2%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--N 84
           T ++ L  NG   EAI  L  +   G +    +    L AC++  S+H  R +H ++  N
Sbjct: 508 TMMNGLVQNGCSEEAILFLRKMQESGMRPNVFSITVALSACVNLASLHFGRSIHGYIIRN 567

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
                   ++T L+ +YAKCG ++ A  VF       L  ++AMI AY+     +E V L
Sbjct: 568 QQHSSSASIETSLVDMYAKCGDINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAVAL 627

Query: 145 FFLMVQD-GLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGM 188
           +  + +D G+ PD+     +L AC + GD  +A ++   +V K GM
Sbjct: 628 YRSLEEDVGIKPDNITITNVLSACNHAGDINQAIEIFTDMVSKHGM 673


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  368 bits (944), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 227/785 (28%), Positives = 391/785 (49%), Gaps = 78/785 (9%)

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFF-LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           +LYT + +I  Y+     +E + ++  +++  G+ PD+F FP +L AC     F  G  +
Sbjct: 85  SLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQV 144

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H +V+K+G+     V NS++  Y  CGK+   R+ F+ M E++ V+W S+I+GY  +   
Sbjct: 145 HGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMA 204

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT---- 295
            EA  LF +M    ++   VT    I +  +L   ++  ++   M  LG+  +       
Sbjct: 205 KEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNAL 264

Query: 296 ---------------------------WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
                                      +  ++S + Q+G   + L +  EM   G  P+ 
Sbjct: 265 LDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDK 324

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
           VT+ S I+AC  L  L++G   H+   + G      + N++I+MY KC + EAA +VFD 
Sbjct: 325 VTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDS 384

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           + +K                                    V+TWN LI+G +++G  + A
Sbjct: 385 MSNK-----------------------------------TVVTWNSLIAGLVRDGELELA 409

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
           + +F  M ++     N  SWN++I    Q      A+ + R+MQ+     + VT++ +  
Sbjct: 410 LRIFGEMPES-----NLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIAS 464

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT 568
           AC YL A +  K I+  + +  +   + +  +L+D +++ G+ + +  +F+ M  +D+  
Sbjct: 465 ACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSA 524

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT 628
           W + I    + G    A++LFD+M    +K +   F++++ A S  G VD G+++F ++ 
Sbjct: 525 WTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAME 584

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
           + + + P I HY  M+DL GR+G LEEA + ++ MPI+P+  IW + L ACR H N++ A
Sbjct: 585 KIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFA 644

Query: 689 VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL 748
             A E++  L P  V I  L+  IYA  GK  D  +VR   +E   +   G   IEV  L
Sbjct: 645 NYADEKITQLAPEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGL 704

Query: 749 VYTFVTGGWSESYSDLLYSWLQNVPENVT-----ARSSHSGLCIEEEEKEEISGIHSEKL 803
           +  F +G  S + +  +   LQ +   ++       +++  + ++E+EKE +   HSEKL
Sbjct: 705 IREFTSGDESHTENAQIGLMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKL 764

Query: 804 ALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCS 863
           A+A+ LI + +    IR+VKN+RMC  CH  AK VS ++  EI + D+   H FK G CS
Sbjct: 765 AMAYGLINTGKGI-PIRVVKNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFCS 823

Query: 864 CGDYW 868
           C D+W
Sbjct: 824 CRDFW 828



 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 146/543 (26%), Positives = 236/543 (43%), Gaps = 71/543 (13%)

Query: 34  GNGRLNEAITV-LDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF---LNLVTEI 89
            +G   EAI + L  I   G      T+  LL AC    +     ++H     + LV   
Sbjct: 98  ASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVK-- 155

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D+FV   L+  YA CG +D  R+VF++M ERN+ +W+++I  YS     +E V LFF MV
Sbjct: 156 DLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMV 215

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           + G+ P+       + AC    D E GK + +L+ +LG+     V N++L +Y+KCG + 
Sbjct: 216 EVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMY 275

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
             R  F+   +K+ V +N+++S Y Q G   E   + D+M ++  +   VT    I +  
Sbjct: 276 AVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACA 335

Query: 270 QLGQ--------------------------CDVAMEMVKRMESLGI-----TPDVFTWTC 298
           QLG                            D+ M+  KR  +  +        V TW  
Sbjct: 336 QLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNS 395

Query: 299 MISGFAQNGRT-------------------------------SQALDLFKEMSFVGVMPN 327
           +I+G  ++G                                  +A+DL +EM   G+  +
Sbjct: 396 LIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGD 455

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            VT+    SAC  L AL +   I++   K     D+ +G +L++M+S+C +   A RVF+
Sbjct: 456 RVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFE 515

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
            ++ +DV +W + I      G    A ELF +M + DV  +   +  L++ +   G  D+
Sbjct: 516 NMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQ 575

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
              LF  M K   V      +  ++     LG+       F  M+S    PN V   S L
Sbjct: 576 GRQLFWAMEKIHGVSPQIVHYGCMV---DLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFL 632

Query: 508 PAC 510
            AC
Sbjct: 633 AAC 635


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  368 bits (944), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 258/862 (29%), Positives = 405/862 (46%), Gaps = 124/862 (14%)

Query: 41  AITVLDSIATQGAKVRRNTYI--NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLL 98
           A  V   I T G K   NT+I   L+     S++I  ARKL    + + + D+  +T LL
Sbjct: 24  ARAVHAHILTSGFK--PNTFILNRLINIYCKSSNITYARKL---FDKIPKPDIVARTTLL 78

Query: 99  SVYAKCGCLDDAREVFE--DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           S Y+  G +  A+++F    +  R+  +++AMI AYS        + LF  M + G  PD
Sbjct: 79  SAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPD 138

Query: 157 DFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK-------- 207
            F F  +L A     D E   +++H  VIKLG   +  V N++L+ YV C          
Sbjct: 139 PFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQ 198

Query: 208 -LIWARRFFESMDEKD--GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
            +  AR+ F+   +      +W +MI+GY +  +   A  L D +          T+ I 
Sbjct: 199 LMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGL----------TYPI- 247

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
                     DVA                  W  MISG+ + G   +A D F+ M  +G+
Sbjct: 248 ----------DVA------------------WNAMISGYVRRGLYEEAFDTFRRMHSMGI 279

Query: 325 MPNGVTITSAISAC----TDLKALAMGMEIHSLAVKMGFTDD----VLVGNSLINMYSKC 376
             +  T TS ISAC      +     G ++H   ++          + V N+LI  Y+K 
Sbjct: 280 QEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKY 339

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
           + +  A RVFD +  +D+                                   I+WN ++
Sbjct: 340 DRMIEARRVFDKMPVRDI-----------------------------------ISWNAVL 364

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
           SGY+     +EA  +F  M +     RN  +W  +I+G  Q G     L +F +M+S   
Sbjct: 365 SGYVNAQRIEEANSIFSEMPE-----RNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGL 419

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            P        + AC+ L + +  ++IH  V+R   +S L   N+LI  Y++ G +  + +
Sbjct: 420 EPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAES 479

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           +F  M   D ++WN++I     HG    A++LF+QM    + P+R TFL+I+ A + AG+
Sbjct: 480 VFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGL 539

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           +  G+  F ++   Y I P  +HY+ +IDL  R+G   +A   I+ MP E  + IWEALL
Sbjct: 540 IKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALL 599

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
             CRIHGN++L + A +RL +L PG      ++  +YA  G+ ++  +VR L RE   + 
Sbjct: 600 AGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKK 659

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPENVTARSSHSGLC 786
             G  W+EV+N+V+ F+           +Y++LQ           VP+  T    H    
Sbjct: 660 EPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPD--TKFVLHD--- 714

Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
           +E E KE     HSEKLA+ + ++       TIR+ KN+R+C  CH   KY+S +   EI
Sbjct: 715 MESEHKEHSLSTHSEKLAVVYGIMKLPLGA-TIRVFKNLRICGDCHNAFKYISKVVEREI 773

Query: 847 FLADSKCLHHFKNGQCSCGDYW 868
            + D K  HHFKNG+CSCG+YW
Sbjct: 774 VVRDRKRFHHFKNGECSCGNYW 795



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 170/402 (42%), Gaps = 49/402 (12%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNS----IHLARKLHAF-LNLVTEID 90
           G   EA      + + G +    TY +L+ AC   N      +  R++H + L  V E  
Sbjct: 262 GLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPS 321

Query: 91  ----VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV----- 141
               + V   L++ Y K   + +AR VF+ M  R++ +W+A++  Y   QR  E      
Sbjct: 322 HHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFS 381

Query: 142 --------------------------VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
                                     ++LF  M  +GL P D+ F   + AC   G  + 
Sbjct: 382 EMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDN 441

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G+ +HS VI+LG        N+++ +Y +CG +  A   F +M   D V+WN+MI+   Q
Sbjct: 442 GQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQ 501

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVF 294
            G   +A  LF++M +E+I    +TF  ++ + N  G           M    GITP   
Sbjct: 502 HGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGED 561

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
            +  +I    + G   +A  + K M F    P      + ++ C     + +G++     
Sbjct: 562 HYARLIDLLCRAGMFLKAQSVIKSMPFEAGAP---IWEALLAGCRIHGNMELGIQAADRL 618

Query: 355 VKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDMIKDKDV 394
           +++    D   G  +I  NMY+   + +   RV  +++++ V
Sbjct: 619 LELIPGQD---GTYIILSNMYAALGQWDEVARVRLLMRERGV 657


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  368 bits (944), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 255/770 (33%), Positives = 386/770 (50%), Gaps = 90/770 (11%)

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +HS V K       R+ N++L+++V+ G L+ A   F  M E+D  +WN ++ GY +
Sbjct: 113 GSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAK 172

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV-- 293
            G  DEA  L+ +M    I+  V TF  ++R+   L       E+   +   G   DV  
Sbjct: 173 AGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDV 232

Query: 294 -----------------------------FTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
                                         +W  MISG+ +N    + L LF  M    V
Sbjct: 233 VNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFV 292

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            P+ +T+TS ISAC  L    +G E+H   +K GF  +V V NSLI M+S     + AE 
Sbjct: 293 DPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEM 352

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN---------------- 428
           VF  ++ KD+ SW +MI+GY + G   KA E +  M+   V P+                
Sbjct: 353 VFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGL 412

Query: 429 -------------------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
                              VI  N LI  Y +    D+A+++F R+       +N  SW 
Sbjct: 413 LDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPN-----KNVISWT 467

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           S+I G +   +   AL  F++M  S   PN VT++SVL ACA + A +  KEIH   LR 
Sbjct: 468 SIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRT 526

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            L     + N+L+D Y + G +  +   F+    KD+ +WN L+ GY   G    A++LF
Sbjct: 527 GLGFDGFLPNALLDMYVRCGRMEPAWNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELF 585

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            +M    + P+  TF S++ A S +GMV  G + F S+   + I P ++HY++++DL GR
Sbjct: 586 HKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGR 645

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +G+LE+A EFI+ MPI+PD +IW ALL ACRI+ N++L  LA + +F+++   V    L+
Sbjct: 646 AGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILL 705

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             +YA  GK ++  +VRK+ REN      G  W+EV   V+ F+TG         + + L
Sbjct: 706 CNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVL 765

Query: 770 QNVPENVTARSSHSGLCIEEE--------EKEEISGIHSEKLALAFALIGSSQAPHT-IR 820
           +   E + A    +GL + ++         K EI   HSE+LA+AF LI +   P T I 
Sbjct: 766 EGFYEKMEA----TGLSMSKDSRRDDIDASKAEIFCGHSERLAIAFGLINT--VPGTPIW 819

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGD--YW 868
           + KN+ MC +CH T K++S +    I + D++  HHFK+G CSCGD  YW
Sbjct: 820 VTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGDEGYW 869



 Score =  252 bits (644), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 182/612 (29%), Positives = 298/612 (48%), Gaps = 78/612 (12%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-LVTEID 90
           LC  G L +A+  LDS+      V   TYI LL+ C    +     ++H++++  VT + 
Sbjct: 69  LCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLG 128

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           V +   LLS++ + G L +A  VF  M ER+L++W+ ++G Y++   + E + L+  M+ 
Sbjct: 129 VRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLW 188

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G+ PD + FP +L+ CG   D   G+ +H  VI+ G      V N+++ +YVKCG +  
Sbjct: 189 VGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFS 248

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGEND---EAHRLF--------------------- 246
           AR  F+ M  +D ++WN+MISGYF   END   E  RLF                     
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYF---ENDVCLEGLRLFFMMREFFVDPDLMTMTSVISA 305

Query: 247 ------DKMCRE----EIKLGVVT----FNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
                 +++ RE     IK G V      N LI+ ++ +G  D A  +  +ME      D
Sbjct: 306 CEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKME----FKD 361

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           + +WT MISG+ +NG   +A++ +  M   GV+P+ +TI S +SAC  L  L  G+ +H 
Sbjct: 362 LVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHE 421

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
            A + G T  V+V NSLI+MYSKC  ++ A  VF  I +K+V SW S+I G  +  Y   
Sbjct: 422 FADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGL-RLNYRSF 480

Query: 413 AYELFIKMQESDVPPNVITWNVLIS-----GYIQNGNEDEA-----------------VD 450
               F +     + PN +T   ++S     G +  G E  A                 +D
Sbjct: 481 EALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLD 540

Query: 451 LFQRMGKNDKV-------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           ++ R G+ +         +++ ASWN L+ GY Q G+   A+ +F KM  S   P+ +T 
Sbjct: 541 MYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITF 600

Query: 504 LSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
            S+L AC+   + ++ ++       +  +  +L    S++D   ++G +  +      M 
Sbjct: 601 TSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMP 660

Query: 563 -SKDIITWNSLI 573
              D   W +L+
Sbjct: 661 IDPDPAIWGALL 672



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 6/212 (2%)

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           NSLI      G    AL     MQ         T +++L  C +  A+++   +H  V +
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
                 + + N+L+  + + G++V +  +F  M+ +D+ +WN L+ GY   G++  AL+L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDL--GKKVFCSITECYQIIPMIEHYSAMIDL 646
           + +M   G++P+  TF  ++   +  G+ DL  G++V   +   Y     ++  +A+I +
Sbjct: 183 YHRMLWVGIRPDVYTFPCVL--RTCGGLPDLARGREVHLHVIR-YGFESDVDVVNALITM 239

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           Y + G +  A    + MP   D   W A+++ 
Sbjct: 240 YVKCGDIFSARLVFDRMP-RRDRISWNAMISG 270



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 108/237 (45%), Gaps = 5/237 (2%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T +++L AC    ++   +++HA  L      D F+   LL +Y +CG ++ A   F   
Sbjct: 499 TLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC 558

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG- 176
            E+++ +W+ ++  Y++  +    VELF  M++  + PD+  F  +L AC   G    G 
Sbjct: 559 -EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGL 617

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQ 235
           +   S+  K  ++   +   SV+ +  + G+L  A  F + M  + D   W ++++   +
Sbjct: 618 EYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNA-CR 676

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
           I +N E   L  +   E     V  + +L   Y   G+ D    + K M    +T D
Sbjct: 677 IYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVD 733


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 233/774 (30%), Positives = 391/774 (50%), Gaps = 75/774 (9%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFE--DMR 118
           LLQ C +   +   +++HAF+ +V  I  D +   ++L +YA CG   +  ++F   D R
Sbjct: 37  LLQDCSNLTLLRQGKQVHAFV-IVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSR 95

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
             ++  W+++I ++ R     + +  +F M+  G+ PD   FP +++AC    +F+  + 
Sbjct: 96  LSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEF 155

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +   V  LGM C   V +S++  Y++ GK+  A + F+ + +KD V WN M++GY + G 
Sbjct: 156 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGA 215

Query: 239 NDEAHRLFDKMCREEIKLGVVTF-----------------------------------NI 263
           +D   + F  M  ++I    VTF                                   N 
Sbjct: 216 SDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNS 275

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+  Y++ G+ D A+++ + M       D  TW CMISG+ Q+G   ++L  F EM   G
Sbjct: 276 LLSMYSKCGRFDDAIKLFRMMS----RADTVTWNCMISGYVQSGLMEESLIFFYEMISSG 331

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V+P+ +T +S + + +  + L    +IH   ++   + D+ + ++LI+ Y KC  +  A+
Sbjct: 332 VLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 391

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS------ 437
           ++F      DV  + +MI+GY   G    A E+F  + +  + PN IT   ++       
Sbjct: 392 KIFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLL 451

Query: 438 ---------GYIQNGNEDE-------AVDLFQRMGKNDKV--------KRNTASWNSLIA 473
                    G+I     D         +D++ + G+ +          KR+  SWNS+I 
Sbjct: 452 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMIT 511

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
              Q    + A+ +FR+M  S    +CV+I + L ACA L + +  K IHG +++ SL  
Sbjct: 512 RCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLAL 571

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM- 592
            +   ++LID YAK GN+  +  +FD M  K+I++WNS+I  Y  HG    +L LF +M 
Sbjct: 572 DVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMV 631

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
           +  G +P++ TFL II      G VD G + F S+T+ Y I P  EHY+ ++DL+GR+G+
Sbjct: 632 EKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGR 691

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQI 712
           L EA E ++ MP  PD+ +W  LL A R+H N++LA +A  RL DL+P +     LI   
Sbjct: 692 LSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDPWNSGYYVLISNA 751

Query: 713 YAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
           +A  G+ E   KVR L +E   +   G  WIE+  + + FV+G  +   S  +Y
Sbjct: 752 HANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFVSGDVNHPESSHIY 805



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 164/656 (25%), Positives = 291/656 (44%), Gaps = 88/656 (13%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-LVTEIDVFVK 94
           G LN+A+     +   G     +T+  L++AC+   +      L   ++ L  + + FV 
Sbjct: 113 GLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVA 172

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           + L+  Y + G +D A ++F+ + +++   W+ M+  Y++      V++ F LM  D + 
Sbjct: 173 SSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQIS 232

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+   F  +L  C +    + G  +H LV+  G+     ++NS+L++Y KCG+   A + 
Sbjct: 233 PNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKL 292

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS---YNQL 271
           F  M   D V WN MISGY Q G  +E+   F +M    +    +TF+ L+ S   +  L
Sbjct: 293 FRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENL 352

Query: 272 GQC--------------DV--------------AMEMVKRMESLGITPDVFTWTCMISGF 303
             C              D+               + M +++ S   + DV  +T MISG+
Sbjct: 353 EYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGY 412

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
             NG    AL++F+ +  V + PN +T+ S +     L AL +G E+H   +K GF +  
Sbjct: 413 LHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRC 472

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
            +G ++I+MY+KC  +  A  +F  +  +D+ SWNSMI    Q+     A ++F +M  S
Sbjct: 473 NIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS 532

Query: 424 -----------------DVPP------------------NVITWNVLISGYIQNGNEDEA 448
                            ++P                   +V + + LI  Y + GN   A
Sbjct: 533 GICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAA 592

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM-QSSCFYPNCVTILSVL 507
           +++F  M      ++N  SWNS+IA Y   G+  ++L +F +M + S   P+ +T L ++
Sbjct: 593 MNVFDTMK-----EKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEII 647

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNS------LIDTYAKSGNIVYSRTIFDGM 561
             C ++     V E  G    RS+     +         ++D + ++G +  +      M
Sbjct: 648 SLCCHV---GDVDE--GVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSM 702

Query: 562 S-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSLAG 615
               D   W +L+    LH   +  L      +   L P N G ++ I  AH+  G
Sbjct: 703 PFPPDAGVWGTLLGASRLHK--NVELAKVASSRLMDLDPWNSGYYVLISNAHANTG 756


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  367 bits (943), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 241/770 (31%), Positives = 388/770 (50%), Gaps = 78/770 (10%)

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
           +C +  A K +H+L++  G S    +   ++ +YV  G +  +R  F+ + +K+  +WNS
Sbjct: 31  SCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNS 90

Query: 229 MISGYFQIGENDEA----HRLFDKMCREEIKLGVVTFNILIRS----------------- 267
           +IS Y + G+  EA    ++LF       ++    TF  ++++                 
Sbjct: 91  IISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKM 150

Query: 268 ---------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
                          Y++ G  DVA ++   M       DV +W  MISGF QNG  + A
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMP----VKDVGSWNAMISGFCQNGNAAGA 206

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
           L +   M   GV  + +T+ S +  C     +  G+ IH   +K G   DV V N+LINM
Sbjct: 207 LGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINM 266

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           YSK   L+ A+ VFD ++ +D+ SWNS+IA Y Q      A   F  MQ   + P+++T 
Sbjct: 267 YSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTV 326

Query: 433 NVLISGYIQNGNE-----------------------DEAVDLFQRMGK--------NDKV 461
             L S + Q  ++                       +  V+++ ++G         +   
Sbjct: 327 VSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP 386

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQS-SCFYPNCVTILSVLPACAYLVASNKVK 520
           +++T SWN+L+ GY Q G  + A+  +  M+      PN  T +S++PA +++ A  +  
Sbjct: 387 RKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGM 446

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
           +IH  +++ SL   + V   LID Y K G +  + ++F  +     + WN++I    +HG
Sbjct: 447 KIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHG 506

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
               AL LF  M +  +K +  TF+S++ A S +G+VD G+K F  + + Y I P ++HY
Sbjct: 507 RGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHY 566

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
             M+DL GR+G LE+A E + +MPI+PD+SIW ALL+AC+I+GN +L  LA +RL +++ 
Sbjct: 567 GCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDS 626

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
            +V    L+  IYA   K E  +KVR L R+   R + G   + V +    F TG  +  
Sbjct: 627 ENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHP 686

Query: 761 YSDLLYSWLQNVPENVTARS-----SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQA 815
               +Y  L+ +   + +       S     IEE+EKE+I   HSE+LA+AF +I S+  
Sbjct: 687 KYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGII-STPP 745

Query: 816 PHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCG 865
              IRI KN+R+C  CH   KY+S +   EI + DS   HHFK+G CSC 
Sbjct: 746 RSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDGICSCA 795



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 158/595 (26%), Positives = 280/595 (47%), Gaps = 90/595 (15%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
           L  +C++ N+    +KLHA L +  +  ++ + TKL+++Y   G +  +R  F+ + ++N
Sbjct: 28  LFNSCVNVNA---TKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKN 84

Query: 122 LYTWSAMIGAYSRDQRWRE----VVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
           +++W+++I AY R  ++ E    V +LF +     L PD + FP IL+AC +  D   GK
Sbjct: 85  IFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GK 141

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H  V K+G      V  S++ +Y + G L  A + F  M  KD  +WN+MISG+ Q G
Sbjct: 142 KVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNG 201

Query: 238 ENDEAHRLFDKMCREEIKLGVVTF-----------------------------------N 262
               A  + ++M  E +K+  +T                                    N
Sbjct: 202 NAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN 261

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            LI  Y++ G+   A  +  +ME      D+ +W  +I+ + QN   S AL  FK M   
Sbjct: 262 ALINMYSKFGRLQDAQMVFDQME----VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLG 317

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD-DVLVGNSLINMYSKCEELEA 381
           G+ P+ +T+ S  S  + L    +   I    ++  + D DV++GN+L+NMY+K   +  
Sbjct: 318 GIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNC 377

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE-SDVPPNVITWNVLISGY- 439
           A  VFD +  KD  SWN+++ GY Q G   +A + +  M+E  D  PN  TW  +I  Y 
Sbjct: 378 AHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYS 437

Query: 440 ----IQNGNEDEA-----------------VDLFQRMGKND-------KVKRNTA-SWNS 470
               +Q G +  A                 +DL+ + G+ +       ++ R+T+  WN+
Sbjct: 438 HVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNA 497

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC--VLR 528
           +IA     G+   AL +F+ M +     + +T +S+L AC++   S  V E   C  +++
Sbjct: 498 IIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSH---SGLVDEGQKCFDIMQ 554

Query: 529 R--SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
           +   ++ SL     ++D   ++G +  +  +   M    D   W +L+    ++G
Sbjct: 555 KEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYG 609



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 232/517 (44%), Gaps = 52/517 (10%)

Query: 36  GRLNEAITVLDSIATQ--GAKVRRN--TYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           G+ +EA+  ++ + +   G  +R +  T+  +L+AC+   S+   +K+H     +  E D
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGFEDD 155

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           VFV   L+ +Y++ G LD A +VF DM  +++ +W+AMI  + ++      + +   M  
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKG 215

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           +G+  D      IL  C    D   G L+H  V+K G+     V N+++ +Y K G+L  
Sbjct: 216 EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQD 275

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC-------------------- 250
           A+  F+ M+ +D V+WNS+I+ Y Q  +   A R F  M                     
Sbjct: 276 AQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQ 335

Query: 251 ----------------REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                           RE +   VV  N L+  Y +LG  + A  +  ++       D  
Sbjct: 336 LSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPR----KDTI 391

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEIHSL 353
           +W  +++G+ QNG  S+A+D +  M      +PN  T  S I A + + AL  GM+IH+ 
Sbjct: 392 SWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAK 451

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            +K     DV V   LI++Y KC  LE A  +F  I       WN++IA     G   +A
Sbjct: 452 LIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEA 511

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            +LF  M    V  + IT+  L+S    +G  DE    F  M K   +K +   +  ++ 
Sbjct: 512 LQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVD 571

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
              + G    A  + R M      P+     ++L AC
Sbjct: 572 LLGRAGYLEKAYELVRNMP---IQPDASIWGALLSAC 605



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 197/431 (45%), Gaps = 31/431 (7%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNS------IHLARKLHAFLNL 85
            C NG    A+ VL+ +  +G K+   T  ++L  C  S+       IHL    H     
Sbjct: 197 FCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGL--- 253

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
             + DVFV   L+++Y+K G L DA+ VF+ M  R+L +W+++I AY ++      +  F
Sbjct: 254 --DSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFF 311

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK---LGMSCVRRVRNSVLAVY 202
             M   G+ PD      +        D    + +   VI+   L    V  + N+++ +Y
Sbjct: 312 KGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVV--IGNALVNMY 369

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--CREEIKLGVVT 260
            K G +  A   F+ +  KD ++WN++++GY Q G   EA   ++ M  CR+ I     T
Sbjct: 370 AKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIP-NQGT 428

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
           +  +I +Y+ +G     M++  ++    +  DVF  TC+I  + + GR   A+ LF E+ 
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP 488

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
               +P    I S        +AL +  ++ +  VK     D +   SL++  S    ++
Sbjct: 489 RDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKA----DHITFVSLLSACSHSGLVD 544

Query: 381 AAERVFDMIKDK-----DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
             ++ FD+++ +      +  +  M+    +AGY  KAYEL   M    + P+   W  L
Sbjct: 545 EGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMP---IQPDASIWGAL 601

Query: 436 ISGYIQNGNED 446
           +S     GN +
Sbjct: 602 LSACKIYGNAE 612



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 107/461 (23%), Positives = 203/461 (44%), Gaps = 78/461 (16%)

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
           ++C ++ A     ++H+L +  G + ++++   LIN+Y    ++  +   FD I  K+++
Sbjct: 30  NSCVNVNATK---KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIF 86

Query: 396 SWNSMIAGYCQAGYCGKAY----ELFIKMQESDVPPNVITWNVLISGYI----------- 440
           SWNS+I+ Y + G   +A     +LF       + P+  T+  ++   +           
Sbjct: 87  SWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCC 146

Query: 441 --QNGNEDEA------VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNA 484
             + G ED+       V L+ R G  D           ++  SWN++I+G+ Q G    A
Sbjct: 147 VFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGA 206

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE---IHGCVLRRSLESSLPVMNSL 541
           LGV  +M+      + +T+ S+LP CA    S+ V     IH  VL+  L+S + V N+L
Sbjct: 207 LGVLNRMKGEGVKMDTITVASILPVCA---QSDDVINGVLIHLHVLKHGLDSDVFVSNAL 263

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
           I+ Y+K G +  ++ +FD M  +D+++WNS+I  Y  +     AL  F  M+  G++P+ 
Sbjct: 264 INMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDL 323

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
            T +S+    S      + + +   +     +   +   +A++++Y + G +  A    +
Sbjct: 324 LTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFD 383

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLA---IERLFDLEPG----------------- 701
            +P   D+  W  L+T    +G    A+ A   +E   D  P                  
Sbjct: 384 QLP-RKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGAL 442

Query: 702 -----------------DVLIQRLILQIYAICGKPEDALKV 725
                            DV +   ++ +Y  CG+ EDA+ +
Sbjct: 443 QQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSL 483


>gi|359490555|ref|XP_003634110.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 678

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 213/589 (36%), Positives = 327/589 (55%), Gaps = 23/589 (3%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           +V  +  MI  +  N   S AL +FK M+  G+ P+  T    + A +  + L +GM+IH
Sbjct: 101 NVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIH 160

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           +  V++G   +V VGN LI+MY KC  L  A RV D +  +DV SWNS++AG  + G   
Sbjct: 161 AAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQFD 220

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQN--GNEDEAVDLFQRMGKNDKVKRNTASWN 469
            A E+  +M+   + P+  T   L+         N     ++F ++       ++  SWN
Sbjct: 221 DALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLAN-----KSLVSWN 275

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
            +IA Y        A+ +F +M+     P+ ++I SVLPAC  L A    + IH  V+R+
Sbjct: 276 VMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRK 335

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            L+ +L + N+LID YAK G + Y+R +FD M  +D+++W S+I  Y ++G    A+ LF
Sbjct: 336 RLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLF 395

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            +M+  GL P+   F+S++ A S AG++D G+  F  +TE  +I+P IEH+  M+DL GR
Sbjct: 396 SRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGR 455

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +G+++EA  FI+ MP+EP+  +W ALL+ACR++ N+ + +LA ++LF L P       L+
Sbjct: 456 AGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLL 515

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             IYA  G+ ED   VR + +    +   G    E+ N V+TF+ G  S   S  +Y  L
Sbjct: 516 SNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEEL 575

Query: 770 Q----------NVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTI 819
                       VPE  +A        +EEE+KE    +HSEKLA+AFA++ ++     I
Sbjct: 576 DVSVGKMKEAGYVPETDSALHD-----VEEEDKECHLAVHSEKLAIAFAILNTAPG-SPI 629

Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           RI KN+R+C  CH  AK +S +   EI + D+   HHF NG CSCGDYW
Sbjct: 630 RITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 678



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 229/452 (50%), Gaps = 8/452 (1%)

Query: 62  NLLQACIDSNS-IHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           NL    +D N  I   +KLH+ + +  ++  +  +  KL+  YA CG     R +F+++ 
Sbjct: 39  NLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIP 98

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           ++N+  ++ MI +Y  +  + + + +F  M   G+ PD + +P +L+A     D   G  
Sbjct: 99  KKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQ 158

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H+ V+++G+     V N ++++Y KCG L+ A R  + M  +D V+WNS+++G  + G+
Sbjct: 159 IHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDQMPCRDVVSWNSLVAGCARNGQ 218

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
            D+A  +  +M    +K    T   L+ +      C   +  VK M        + +W  
Sbjct: 219 FDDALEVCKEMELLGLKPDAGTMASLLPAVTN--TCLDNVSFVKEMFMKLANKSLVSWNV 276

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           MI+ +  N   ++A+D+F +M    V P+ ++I S + AC DL AL +G  IH   V+  
Sbjct: 277 MIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKR 336

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              ++L+ N+LI+MY+KC  LE A  VFD +K +DV SW SMI+ Y   G    A  LF 
Sbjct: 337 LQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFS 396

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
           +MQ+  + P+ I +  ++S     G  DE    F+ M +  K+      +  ++    + 
Sbjct: 397 RMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRA 456

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           GQ + A G  ++M      PN     ++L AC
Sbjct: 457 GQVDEAYGFIKQMP---MEPNERVWGALLSAC 485



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 11/220 (5%)

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCV-LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           C  IL   P   YL      K++H  + +   L S+  +   L+  YA  G    +R IF
Sbjct: 41  CGQILDKNPDIKYL------KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIF 94

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           D +  K+++ +N +I  YV +  +  AL +F  M   G+ P+  T+  ++ A S +  + 
Sbjct: 95  DEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLW 154

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           +G ++  ++      + +    + +I +YG+ G L EA   ++ MP   D   W +L+  
Sbjct: 155 VGMQIHAAVVRVGLDLNVFVG-NGLISMYGKCGCLVEACRVLDQMPCR-DVVSWNSLVAG 212

Query: 679 CRIHGNID--LAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
           C  +G  D  L V     L  L+P    +  L+  +   C
Sbjct: 213 CARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTC 252


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  367 bits (942), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 208/616 (33%), Positives = 334/616 (54%), Gaps = 20/616 (3%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+R+Y  L     A ++   +       +V     MI  +  NG   + + +F  M    
Sbjct: 80  LMRAYASLKDVASARKVFDEIPE----RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V P+  T    + AC+    + +G +IH  A K+G +  + VGN L++MY KC  L  A 
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
            V D +  +DV SWNS++ GY Q      A E+  +M+   +  +  T   L+       
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255

Query: 444 NED--EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            E+     D+F +MGK     ++  SWN +I  Y +      A+ ++ +M++  F P+ V
Sbjct: 256 TENVMYVKDMFFKMGK-----KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAV 310

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           +I SVLPAC    A +  K+IHG + R+ L  +L + N+LID YAK G +  +R +F+ M
Sbjct: 311 SITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM 370

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
            S+D+++W ++I  Y   G    A+ LF +++  GL P+   F++ + A S AG+++ G+
Sbjct: 371 KSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
             F  +T+ Y+I P +EH + M+DL GR+GK++EA  FI+DM +EP+  +W ALL ACR+
Sbjct: 431 SCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRV 490

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H + D+ +LA ++LF L P       L+  IYA  G+ E+   +R + +    + + G  
Sbjct: 491 HSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWL----QNVPENVTARSSHSGLC-IEEEEKEEIS 796
            +EV  +++TF+ G  S   SD +Y  L    + + E      S S L  +EEE+KE   
Sbjct: 551 NVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHL 610

Query: 797 GIHSEKLALAFALIGSSQ----APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
            +HSEKLA+ FAL+ + +    + +TIRI KN+R+C  CH  AK +S +   EI + D+ 
Sbjct: 611 AVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTN 670

Query: 853 CLHHFKNGQCSCGDYW 868
             H F+ G CSCGDYW
Sbjct: 671 RFHVFRFGVCSCGDYW 686



 Score =  192 bits (487), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 251/533 (47%), Gaps = 36/533 (6%)

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
           KL+  YA    +  AR+VF+++ ERN+   + MI +Y  +  + E V++F  M    + P
Sbjct: 79  KLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRP 138

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D + FP +L+AC   G    G+ +H    K+G+S    V N ++++Y KCG L  AR   
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           + M  +D V+WNS++ GY Q    D+A  +  +M   +I     T   L+ + +     +
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
           V    VK M        + +W  MI  + +N    +A++L+  M   G  P+ V+ITS +
Sbjct: 259 VMY--VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
            AC D  AL++G +IH    +     ++L+ N+LI+MY+KC  LE A  VF+ +K +DV 
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV 376

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           SW +MI+ Y  +G    A  LF K+Q+S + P+ I +   ++     G  +E    F+ M
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 436

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY--- 512
             + K+   T     L      LG+       +R +Q     PN     ++L AC     
Sbjct: 437 TDHYKI---TPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSD 493

Query: 513 ----LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI-- 566
               L+A++K+ ++         +S   V+  L + YAK+G       I + M SK +  
Sbjct: 494 TDIGLLAADKLFQL------APEQSGYYVL--LSNIYAKAGRWEEVTNIRNIMKSKGLKK 545

Query: 567 ------ITWNSLICGYVLHGFWHAALD--------LFDQMKSFGLKPNRGTFL 605
                 +  N +I  +++    H   D        L  +MK  G  P+  + L
Sbjct: 546 NPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESAL 598



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 101/451 (22%), Positives = 200/451 (44%), Gaps = 33/451 (7%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFV 93
           NG   E + V  ++     +    T+  +L+AC  S +I + RK+H     V     +FV
Sbjct: 118 NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+S+Y KCG L +AR V ++M  R++ +W++++  Y+++QR+ + +E+   M    +
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             D      +L A  N    E    +  +  K+G   +    N ++ VY+K    + A  
Sbjct: 238 SHDAGTMASLLPAVSNTTT-ENVMYVKDMFFKMGKKSLVS-WNVMIGVYMKNAMPVEAVE 295

Query: 214 FFESMD----EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            +  M+    E D V+  S++             ++   + R+++   ++  N LI  Y 
Sbjct: 296 LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYA 355

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           + G  + A ++ + M+S     DV +WT MIS +  +GR   A+ LF ++   G++P+ +
Sbjct: 356 KCGCLEKARDVFENMKS----RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL------INMYSKCEELEAAE 383
              + ++AC+    L  G     L      TD   +   L      +++  +  +++ A 
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKL-----MTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466

Query: 384 R-VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD----VPPNVITWNVLISG 438
           R + DM  + +   W +++      G C    +  I +  +D    + P    + VL+S 
Sbjct: 467 RFIQDMSMEPNERVWGALL------GACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSN 520

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
                   E V   + + K+  +K+N  + N
Sbjct: 521 IYAKAGRWEEVTNIRNIMKSKGLKKNPGASN 551



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 102/479 (21%), Positives = 201/479 (41%), Gaps = 56/479 (11%)

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
           D    + +HS +I   + C   +   ++  Y     +  AR+ F+ + E++ +  N MI 
Sbjct: 54  DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
            Y   G   E  ++F  MC   ++    TF  ++++ +  G   +  ++      +G++ 
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173

Query: 292 -------------------------------DVFTWTCMISGFAQNGRTSQALDLFKEMS 320
                                          DV +W  ++ G+AQN R   AL++ +EM 
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK-CEEL 379
            V +  +  T+ S + A ++     + M +  +  KMG    ++  N +I +Y K    +
Sbjct: 234 SVKISHDAGTMASLLPAVSNTTTENV-MYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPV 291

Query: 380 EAAERVFDMIKD---KDVYSWNSMIA--GYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           EA E    M  D    D  S  S++   G   A   GK    +I+ ++  + PN++  N 
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK--LIPNLLLENA 349

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           LI  Y + G  ++A D+F+ M   D V     SW ++I+ Y   G+  +A+ +F K+Q S
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKSRDVV-----SWTAMISAYGFSGRGCDAVALFSKLQDS 404

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVL----RRSLESSLPVMNSLIDTYAKSGN 550
              P+ +  ++ L AC++   +  ++E   C         +   L  +  ++D   ++G 
Sbjct: 405 GLVPDSIAFVTTLAACSH---AGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGK 461

Query: 551 IVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
           +  +      MS   +   W +L+    +H      L   D++  F L P +  +  ++
Sbjct: 462 VKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL--FQLAPEQSGYYVLL 518



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 18/202 (8%)

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           +L QK+    VF   Q    YP+  T+                + +H  ++   L  +  
Sbjct: 32  ELDQKSPQETVFLLGQVLDTYPDIRTL----------------RTVHSRIILEDLRCNSS 75

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           +   L+  YA   ++  +R +FD +  +++I  N +I  YV +GF+   + +F  M    
Sbjct: 76  LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           ++P+  TF  ++ A S +G + +G+K+  S T+   +   +   + ++ +YG+ G L EA
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV-GLSSTLFVGNGLVSMYGKCGFLSEA 194

Query: 657 MEFIEDMPIEPDSSIWEALLTA 678
              +++M    D   W +L+  
Sbjct: 195 RLVLDEMS-RRDVVSWNSLVVG 215


>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
           from Arabidopsis thaliana BAC F28A21 gi|T04867 and
           contains multiple PPR PF|01535 repeats. EST gb|AI999742
           comes from this gene. This gene may be cut off, partial
           [Arabidopsis thaliana]
          Length = 757

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 222/729 (30%), Positives = 380/729 (52%), Gaps = 78/729 (10%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D ++  KL++ Y+   C +DA  V + + +  +Y++S++I A ++ + + + + +F  M 
Sbjct: 49  DGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMF 108

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             GL PD  + P + + C     F+ GK +H +    G+     V+ S+  +Y++CG++ 
Sbjct: 109 SHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRM- 167

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
                                          +A ++FD+M  ++    VVT + L+ +Y 
Sbjct: 168 ------------------------------GDARKVFDRMSDKD----VVTCSALLCAYA 193

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           + G  +  + ++  MES GI  ++ +W  ++SGF ++G   +A+ +F+++  +G  P+ V
Sbjct: 194 RKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV 253

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           T++S + +  D + L MG  IH   +K G   D  V +++I+MY K   +     +F+  
Sbjct: 254 TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN-- 311

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
                  +  M AG C                           N  I+G  +NG  D+A+
Sbjct: 312 ------QFEMMEAGVC---------------------------NAYITGLSRNGLVDKAL 338

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           ++F+ + K   ++ N  SW S+IAG  Q G+   AL +FR+MQ +   PN VTI S+LPA
Sbjct: 339 EMFE-LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           C  + A    +  HG  +R  L  ++ V ++LID YAK G I  S+ +F+ M +K+++ W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
           NSL+ G+ +HG     + +F+ +    LKP+  +F S++ A    G+ D G K F  ++E
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE 517

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            Y I P +EHYS M++L GR+GKL+EA + I++MP EPDS +W ALL +CR+  N+DLA 
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAE 577

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR-KLERENTRRNSFGQCWIEVKNL 748
           +A E+LF LEP +     L+  IYA  G   +   +R K+E    ++N  G  WI+VKN 
Sbjct: 578 IAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNP-GCSWIQVKNR 636

Query: 749 VYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGL-----CIEEEEKEEISGIHSEKL 803
           VYT + G  S    D +   +  + + +        L      +EE+E+E++   HSEKL
Sbjct: 637 VYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKL 696

Query: 804 ALAFALIGS 812
           A+ F L+ +
Sbjct: 697 AVVFGLLNT 705



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 151/572 (26%), Positives = 269/572 (47%), Gaps = 48/572 (8%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT--EIDVFVKT 95
             ++I V   + + G     +   NL + C + ++  + +++H  ++ V+  ++D FV+ 
Sbjct: 97  FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHC-VSCVSGLDMDAFVQG 155

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            +  +Y +CG + DAR+VF+ M ++++ T SA++ AY+R     EVV +   M   G+  
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL-----AVYVKCGKLIW 210
           +   +  IL      G  +   +M   +  LG    +   +SVL     +  +  G+LI 
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
                + +  KD    ++MI  Y + G       LF++   E ++ GV   N  I   ++
Sbjct: 276 GYVIKQGL-LKDKCVISAMIDMYGKSGHVYGIISLFNQF--EMMEAGVC--NAYITGLSR 330

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G  D A+EM +  +   +  +V +WT +I+G AQNG+  +AL+LF+EM   GV PN VT
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
           I S + AC ++ AL  G   H  AV++   D+V VG++LI+MY+KC  +  ++ VF+M+ 
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
            K++  WNS++ G+   G   +   +F  +  + + P+ I++  L+S   Q G  DE   
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            F+ M +   +K     ++ ++    + G+   A  + ++M    F P+     ++L +C
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP---FEPDSCVWGALLNSC 567

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
             L  +  + EI    L   LE   P       TY    NI                   
Sbjct: 568 R-LQNNVDLAEIAAEKLFH-LEPENP------GTYVLLSNI------------------- 600

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
                Y   G W     + ++M+S GLK N G
Sbjct: 601 -----YAAKGMWTEVDSIRNKMESLGLKKNPG 627



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 136/308 (44%), Gaps = 16/308 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFV 93
           NG+  EA+ +   +   G K    T  ++L AC +  ++   R  H F   V  +D V V
Sbjct: 366 NGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHV 425

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAKCG ++ ++ VF  M  +NL  W++++  +S   + +EV+ +F  +++  L
Sbjct: 426 GSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRL 485

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  +L ACG  G  + G K    +  + G+       + ++ +  + GKL  A 
Sbjct: 486 KPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAY 545

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
              + M  E D   W ++++        D A    +K+   E +    T+ +L   Y   
Sbjct: 546 DLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPE-NPGTYVLLSNIYAAK 604

Query: 272 GQCDVAMEMVKRMESLGITPD-----------VFTWTCMISGFAQNGRTSQALD-LFKEM 319
           G       +  +MESLG+  +           V+T         Q  + ++ +D + KEM
Sbjct: 605 GMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEM 664

Query: 320 SFVGVMPN 327
              G  PN
Sbjct: 665 RKSGHRPN 672


>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score =  366 bits (940), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 228/687 (33%), Positives = 332/687 (48%), Gaps = 133/687 (19%)

Query: 127 AMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL 186
            ++ +  +  R RE + +   MV++G++P    +  +LQ C N       KL+H+ +I+ 
Sbjct: 34  GLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQT 93

Query: 187 GMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF 246
              C                              +D    N ++S Y ++G   EA R+F
Sbjct: 94  QFEC------------------------------QDISLGNKLVSIYVKLGSLVEARRVF 123

Query: 247 DKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN 306
           D+M                                          +V +WT MI+ +A++
Sbjct: 124 DEMP---------------------------------------VKNVVSWTAMIAAYARH 144

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
               +AL  F EM  VG+ PN  T  S + ACTDL+ L    E H   VK GF  +V VG
Sbjct: 145 EHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLG---EFHDEIVKGGFESNVFVG 201

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ-------------------- 406
           N L++MY+K   +E A  +FD +  +DV SWN+MIAGY Q                    
Sbjct: 202 NGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVI 261

Query: 407 ------AGY--CG---KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
                 AGY  CG    A ELF KM E     N+++WN +I+GY+QNG+  EA  LFQ M
Sbjct: 262 TWNTMMAGYAQCGDVENAVELFEKMPEQ----NLVSWNTMIAGYVQNGSVKEAFKLFQIM 317

Query: 456 ---------------GKNDKVKR-----------NTASWNSLIAGYQQLGQKNNALGVFR 489
                           +N +V+            N  SWN++IAGY Q GQ  NAL +F 
Sbjct: 318 PERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFG 377

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           +MQ     PN  T   VLPACA L    +  E H  V+R   +S + V N+L+  YAK G
Sbjct: 378 QMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCG 437

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
           +I  +R +FD M  +D  + +++I GY ++G    +L+LF+QM+  GLKP+R TF+ ++ 
Sbjct: 438 SIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLS 497

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDS 669
           A   AG+VD G++ F  +T  Y I P +EHY  MIDL GR+G  +EA + I  MPI+PD+
Sbjct: 498 ACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDA 557

Query: 670 SIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLE 729
            +W +LL+ACR H NIDL     + L  L P +     L+  IYA  G+ +D   VR   
Sbjct: 558 DMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRM 617

Query: 730 RENTRRNSFGQCWIEVKNLVYTFVTGG 756
           ++   +   G  WI +K  V+ F+ GG
Sbjct: 618 KDRKVKKKLGCSWIVIKKQVHAFLVGG 644



 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 160/506 (31%), Positives = 257/506 (50%), Gaps = 69/506 (13%)

Query: 13  HSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNS 72
           ++L TK+   +  D  +  LC  GRL EA+ +L  +   G     +TY +LLQ C+++ S
Sbjct: 20  NTLKTKEGTGKGNDGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKS 79

Query: 73  IHLARKLHAFLNLVTEI---DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMI 129
           +  A+ LHA + + T+    D+ +  KL+S+Y K G L +AR VF++M  +N+ +W+AMI
Sbjct: 80  LPDAKLLHAHM-IQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMI 138

Query: 130 GAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMS 189
            AY+R +  +E +  F+ M   G+ P+ F F  IL A   C D E     H  ++K G  
Sbjct: 139 AAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPA---CTDLEVLGEFHDEIVKGGFE 195

Query: 190 CVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
               V N ++ +Y K G + +AR  F+ M ++D V+WN+MI+GY Q G  ++A +LF ++
Sbjct: 196 SNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEI 255

Query: 250 CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES----------------------- 286
            + +    V+T+N ++  Y Q G  + A+E+ ++M                         
Sbjct: 256 PKRD----VITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAF 311

Query: 287 --LGITPD--VFTWTCMISGFAQNGRTSQALDLFK------------------------- 317
               I P+  V +W  +ISGFAQNG+  +AL LFK                         
Sbjct: 312 KLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAEN 371

Query: 318 ------EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
                 +M  V + PN  T    + AC  L  L  G E H + ++ GF  DVLVGN+L+ 
Sbjct: 372 ALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVG 431

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MY+KC  +E A +VFD ++ +D  S ++MI GY   G   ++ ELF +MQ + + P+ +T
Sbjct: 432 MYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVT 491

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGK 457
           +  ++S     G  DE    F  M +
Sbjct: 492 FVGVLSACCHAGLVDEGRQYFDIMTR 517



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 172/362 (47%), Gaps = 16/362 (4%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
           G +  A+ + + +  Q   V  NT   ++   + + S+  A KL     ++ E +V    
Sbjct: 274 GDVENAVELFEKMPEQNL-VSWNT---MIAGYVQNGSVKEAFKL---FQIMPERNVISWN 326

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            ++S +A+ G +++A ++F+ M E N+ +W+AMI  YS++ +    ++LF  M    + P
Sbjct: 327 AVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKP 386

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           +   F  +L AC      E G   H +VI+ G      V N+++ +Y KCG +  AR+ F
Sbjct: 387 NTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVF 446

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           + M ++D  + ++MI GY   G + E+  LF++M    +K   VTF  ++ +    G  D
Sbjct: 447 DRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVD 506

Query: 276 VAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
              +    M     ITP +  + CMI    + G   +A DL  +M    + P+     S 
Sbjct: 507 EGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMP---IKPDADMWGSL 563

Query: 335 ISACTDLKALAMGMEI--HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           +SAC     + +G ++  H +A+        ++   L N+Y+     +    V + +KD+
Sbjct: 564 LSACRTHNNIDLGEKVAQHLIALNPQNPAPYVL---LSNIYAAAGRWDDIGSVRNRMKDR 620

Query: 393 DV 394
            V
Sbjct: 621 KV 622


>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  366 bits (940), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 219/654 (33%), Positives = 354/654 (54%), Gaps = 30/654 (4%)

Query: 50  TQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VFVKTKLLSVYAKCG-C 106
           T  +    +  I+LL  C   +++   R++HA +  +  +     +  KL+ +Y K    
Sbjct: 76  TNSSPTEISDSISLLNRC---STLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWS 132

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           L+DAR++ +++  R +  ++A+I +Y R ++W E+   F LMV +G+ PD +L P IL+A
Sbjct: 133 LEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKA 192

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C        GK++H  VI+  +     V N+++  Y  CG L  +R  F SM E+D V+W
Sbjct: 193 CSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSW 252

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
            ++IS Y + G  DEA  +F  M  + +K  +++++ L+  + + G+ D+A+E ++ M  
Sbjct: 253 TALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPE 312

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
            G+ P V +W  +ISG  QNG    ALD+F  M +    PN +TI S + ACT LKAL +
Sbjct: 313 RGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRL 372

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G  IH +A K G   +V V  S+I+MYSKC   + AE+VF   ++K+   WN MIA Y  
Sbjct: 373 GKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVN 432

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
            G    A  L   MQ+    P+VIT+N ++SG+ +NG + +A +L   M +   +K N  
Sbjct: 433 EGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMG-LKPNVV 491

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSS------------CFYPNCVTILSVLPACAYLV 514
           S+N LI+G+QQ G    AL VFR MQS                PN +TI   LPACA L 
Sbjct: 492 SFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLN 551

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
              + KEIHG  LR   E ++ V ++L+D YAK  ++  +  +F  +  ++ ++WN+L+ 
Sbjct: 552 LWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMA 611

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF-----CSITE 629
           GY+ +     AL LF +M   GL+P+  TF+ +  A      +  G+ +      C + E
Sbjct: 612 GYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDE 671

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
               I      SA+ID+Y + G + +A + + D  +E D  +W A+++A  +HG
Sbjct: 672 LKNAI-----XSALIDMYAKCGSILDA-KSVFDSEVEKDVPLWNAMISAFSVHG 719



 Score =  323 bits (828), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 226/793 (28%), Positives = 372/793 (46%), Gaps = 80/793 (10%)

Query: 90   DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLY----TWSAMIGAYSRDQRWREVVELF 145
            D+   + LLS +A+ G +D A E  E+M ER L     +W+ +I    ++    + +++F
Sbjct: 283  DLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMF 342

Query: 146  FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
              M+     P+      IL AC        GK +H +  K G+     V  SV+ +Y KC
Sbjct: 343  SRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKC 402

Query: 206  GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            G   +A + F   + K+   WN MI+ Y   G+ ++                        
Sbjct: 403  GSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVED------------------------ 438

Query: 266  RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
                       A+ +++ M+  G  PDV T+  ++SG A+NG  +QA +L  EM  +G+ 
Sbjct: 439  -----------ALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLK 487

Query: 326  PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
            PN V+    IS     +   +  E   +   M    D    N ++N+  +   +      
Sbjct: 488  PNVVSFNVLISG---FQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITIT-GA 543

Query: 386  FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
                 D +++     I GY                  +   PN+   + L+  Y +  + 
Sbjct: 544  LPACADLNLWCQGKEIHGYTL---------------RNGFEPNIFVSSALVDMYAKCHDM 588

Query: 446  DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
            D A  +F R+       RNT SWN+L+AGY    Q   AL +F +M      P+ +T + 
Sbjct: 589  DSANKVFFRIDG-----RNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMI 643

Query: 506  VLPACAYLVASNKVKEIHGCVLRRSL-ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
            + PAC  + A    + +HG   +  L E    + ++LID YAK G+I+ ++++FD    K
Sbjct: 644  LFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEK 703

Query: 565  DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
            D+  WN++I  + +HG    A  +F QM+  G+ P+  TF+S++ A +  G+V+ G K F
Sbjct: 704  DVPLWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYF 763

Query: 625  CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
             S+   Y +   +EHY+ M+ + G +G L+EA++FI  MP  PD+ +W  LL ACR+H N
Sbjct: 764  NSMEISYGVAATLEHYTCMVGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSN 823

Query: 685  IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC-WI 743
             ++   A + LF+LEP +     L+  IY   G  + A  +R   R   +  +  +C ++
Sbjct: 824  PEIGERAAKALFELEPDNATNYMLLSNIYVSSGMWDFAKNLRSFMR-GRKLLTIKECSYL 882

Query: 744  EVKNLVYTFVTGGWSES-YSDLLYSWLQNVPENVTARSSHSGL-----CIEEEEKE--EI 795
             V +   TF  G  S     ++L +W     + +  +   SG        ++EEKE    
Sbjct: 883  TVGSHXCTFKGGESSHPELEEILETW-----DXLARKMELSGYFPLDPVFDDEEKELDPF 937

Query: 796  SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
            S +H+EKLA+ F +I SS     + + KNIRMC+ CH +AK +S +   EIF+ D    H
Sbjct: 938  SCLHTEKLAICFGII-SSNXYRPVHVSKNIRMCIDCHTSAKLISKIDGREIFVKDVCFYH 996

Query: 856  HFKNGQCSCGDYW 868
            H K+G C C D W
Sbjct: 997  HMKDGICXCQDRW 1009



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 165/345 (47%), Gaps = 22/345 (6%)

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
           R   ++ +LI  Y +  Q +     FR M      P+   + ++L AC+ ++     K +
Sbjct: 146 RTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKMV 205

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           HG V+R+S+ES + V N+LI  Y+  G++  SR++F  M  +D+++W +LI  Y+  G  
Sbjct: 206 HGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGLX 265

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
             A  +F  M+  G+KP+  ++ +++   +  G +DL  +    + E   + P +  ++ 
Sbjct: 266 DEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPE-RGLQPTVNSWNG 324

Query: 643 MIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLTACRIHGNIDL--AVLAIERLFD 697
           +I    ++G LE+A++    M   P +P+     ++L AC     + L  A+  I     
Sbjct: 325 IISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHG 384

Query: 698 LEPGDVLIQRLILQIYAICGKPEDALKV-RKLERENTRRNSFGQCWIEVKNLVYTFVTGG 756
           +  G+V ++  ++ +Y+ CG  + A KV  K E +NT        W E   ++  +V  G
Sbjct: 385 IV-GNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNT------AMWNE---MIAAYVNEG 434

Query: 757 WSESYSDLLYS-----WLQNVPENVTARSSHSGLCIEEEEKEEIS 796
             E    LL S     W  +V    T  S H+   ++ +  E +S
Sbjct: 435 KVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLS 479



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 4/202 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN--LVTEIDVF 92
           N +  EA+ +   +  +G +    T++ L  AC D  +I   R LH +     + E+   
Sbjct: 616 NKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNA 675

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           + + L+ +YAKCG + DA+ VF+   E+++  W+AMI A+S     R    +F  M   G
Sbjct: 676 IXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELLG 735

Query: 153 LFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           + PD   F  +L AC   G  E G K  +S+ I  G++        ++ +    G L  A
Sbjct: 736 IXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDEA 795

Query: 212 RRFFESMD-EKDGVAWNSMISG 232
             F   M    D   W +++  
Sbjct: 796 LDFIRQMPYPPDACMWATLLQA 817


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  366 bits (940), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 253/766 (33%), Positives = 384/766 (50%), Gaps = 88/766 (11%)

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +HS V K       R+ N++L+++V+ G L+ A   F  M E+D  +WN ++ GY +
Sbjct: 113 GSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAK 172

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV-- 293
            G  DEA  L+ +M    I+  V TF  ++R+   L       E+   +   G   DV  
Sbjct: 173 AGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDV 232

Query: 294 -----------------------------FTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
                                         +W  MISG+ +N    + L LF  M    V
Sbjct: 233 VNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFV 292

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            P+ +T+TS ISAC  L    +G E+H   +K GF  +V V NSLI M+S     + AE 
Sbjct: 293 DPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEM 352

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN---------------- 428
           VF  ++ KD+ SW +MI+GY + G   KA E +  M+   V P+                
Sbjct: 353 VFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGL 412

Query: 429 -------------------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
                              VI  N LI  Y +    D+A+++F R+       +N  SW 
Sbjct: 413 LDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPN-----KNVISWT 467

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           S+I G +   +   AL  F++M  S   PN VT++SVL ACA + A +  KEIH   LR 
Sbjct: 468 SIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSACARIGALSCGKEIHAHALRT 526

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            L     + N+L+D Y + G +  +   F+    KD+ +WN L+ GY   G    A++LF
Sbjct: 527 GLGFDGFLPNALLDMYVRCGRMEPAWNQFNS-CEKDVASWNILLTGYAQQGKGGLAVELF 585

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            +M    + P+  TF S++ A S +GMV  G + F S+   + I P ++HY++++DL GR
Sbjct: 586 HKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGR 645

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +G+LE+A EFI+ MPI+PD +IW ALL ACRI+ N++L  LA + +F+++   V    L+
Sbjct: 646 AGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILL 705

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             +YA  GK ++  +VRK+ REN      G  W+EV   V+ F+TG         + + L
Sbjct: 706 CNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVL 765

Query: 770 QNVPENVTARSSHSGLCIEEE--------EKEEISGIHSEKLALAFALIGSSQAPHT-IR 820
           +   E + A    +GL + ++         K EI   HSE+LA+AF LI +   P T I 
Sbjct: 766 EGFYEKMEA----TGLSMSKDSRRDDIDASKAEIFCGHSERLAIAFGLINT--VPGTPIW 819

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGD 866
           + KN+ MC +CH T K++S +    I + D++  HHFK+G CSCGD
Sbjct: 820 VTKNLYMCENCHNTVKFISKVVRRGISVRDTEQFHHFKDGVCSCGD 865



 Score =  252 bits (644), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 182/612 (29%), Positives = 298/612 (48%), Gaps = 78/612 (12%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-LVTEID 90
           LC  G L +A+  LDS+      V   TYI LL+ C    +     ++H++++  VT + 
Sbjct: 69  LCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLG 128

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           V +   LLS++ + G L +A  VF  M ER+L++W+ ++G Y++   + E + L+  M+ 
Sbjct: 129 VRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLW 188

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G+ PD + FP +L+ CG   D   G+ +H  VI+ G      V N+++ +YVKCG +  
Sbjct: 189 VGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFS 248

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGEND---EAHRLF--------------------- 246
           AR  F+ M  +D ++WN+MISGYF   END   E  RLF                     
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYF---ENDVCLEGLRLFFMMREFFVDPDLMTMTSVISA 305

Query: 247 ------DKMCRE----EIKLGVVT----FNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
                 +++ RE     IK G V      N LI+ ++ +G  D A  +  +ME      D
Sbjct: 306 CEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKME----FKD 361

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           + +WT MISG+ +NG   +A++ +  M   GV+P+ +TI S +SAC  L  L  G+ +H 
Sbjct: 362 LVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHE 421

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
            A + G T  V+V NSLI+MYSKC  ++ A  VF  I +K+V SW S+I G  +  Y   
Sbjct: 422 FADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGL-RLNYRSF 480

Query: 413 AYELFIKMQESDVPPNVITWNVLIS-----GYIQNGNEDEA-----------------VD 450
               F +     + PN +T   ++S     G +  G E  A                 +D
Sbjct: 481 EALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLD 540

Query: 451 LFQRMGKNDKV-------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           ++ R G+ +         +++ ASWN L+ GY Q G+   A+ +F KM  S   P+ +T 
Sbjct: 541 MYVRCGRMEPAWNQFNSCEKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITF 600

Query: 504 LSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
            S+L AC+   + ++ ++       +  +  +L    S++D   ++G +  +      M 
Sbjct: 601 TSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMP 660

Query: 563 -SKDIITWNSLI 573
              D   W +L+
Sbjct: 661 IDPDPAIWGALL 672



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/212 (24%), Positives = 102/212 (48%), Gaps = 6/212 (2%)

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           NSLI      G    AL     MQ         T +++L  C +  A+++   +H  V +
Sbjct: 63  NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
                 + + N+L+  + + G++V +  +F  M+ +D+ +WN L+ GY   G++  AL+L
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDL--GKKVFCSITECYQIIPMIEHYSAMIDL 646
           + +M   G++P+  TF  ++   +  G+ DL  G++V   +   Y     ++  +A+I +
Sbjct: 183 YHRMLWVGIRPDVYTFPCVL--RTCGGLPDLARGREVHLHVIR-YGFESDVDVVNALITM 239

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           Y + G +  A    + MP   D   W A+++ 
Sbjct: 240 YVKCGDIFSARLVFDRMP-RRDRISWNAMISG 270



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 108/237 (45%), Gaps = 5/237 (2%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T +++L AC    ++   +++HA  L      D F+   LL +Y +CG ++ A   F   
Sbjct: 499 TLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSC 558

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG- 176
            E+++ +W+ ++  Y++  +    VELF  M++  + PD+  F  +L AC   G    G 
Sbjct: 559 -EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGL 617

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQ 235
           +   S+  K  ++   +   SV+ +  + G+L  A  F + M  + D   W ++++   +
Sbjct: 618 EYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNA-CR 676

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
           I +N E   L  +   E     V  + +L   Y   G+ D    + K M    +T D
Sbjct: 677 IYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVD 733


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  365 bits (937), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 234/797 (29%), Positives = 392/797 (49%), Gaps = 89/797 (11%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M  +G+  ++F  P +L+      D + G  +H++ +  G      V N+++A+Y   G 
Sbjct: 1   MRAEGVCCNEFALPVVLKCVP---DAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57

Query: 208 LIWARRFF-ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI------------ 254
           +  ARR F E+  E++ V+WN ++S Y +  +  +A ++F +M    I            
Sbjct: 58  MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117

Query: 255 -------------------KLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
                              ++G    V T N L+  Y ++G+ D+A  + ++M       
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPD----S 173

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           DV +W  +ISG   NG   +A++L  +M   G++PN   ++S + AC    A  +G +IH
Sbjct: 174 DVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIH 233

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
              +K     D  +G  L++MY+K   L+ A +VFD +  +D+  WN++I+G    G   
Sbjct: 234 GFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHD 293

Query: 412 KAYELFIKMQESDVPPNVITW-----------------------------------NVLI 436
           +A+ +F  +++  +  N  T                                    N LI
Sbjct: 294 EAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLI 353

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
             Y +     +A+ +F+     D +     +  S+I    Q      A+ +F +M     
Sbjct: 354 DSYWKCSCLSDAIRVFEECSSGDII-----AVTSMITALSQCDHGEGAIKLFMEMLRKGL 408

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            P+   + S+L ACA L A  + K++H  +++R   S     N+L+ TYAK G+I  +  
Sbjct: 409 EPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAEL 468

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
            F  +  + +++W+++I G   HG    AL+LF +M   G+ PN  T  S++ A + AG+
Sbjct: 469 AFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGL 528

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           VD  K+ F S+ E + I    EHYS MIDL GR+GKL++AME +  MP + ++S+W ALL
Sbjct: 529 VDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALL 588

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
            A R+H + +L  LA E+LF LEP       L+   YA  G   +  KVRKL +++  + 
Sbjct: 589 GASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKK 648

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCI-----EEEE 791
                W+EVK+ V+TF+ G  S   +  +YS L  + + ++       + +     +  E
Sbjct: 649 EPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSE 708

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           KE +   HSE+LA+AFAL+ S+     IR+ KN+R+C  CH   K++S +   EI + D 
Sbjct: 709 KELLLSHHSERLAVAFALL-STPPGAPIRVKKNLRICRDCHMAFKFISNIVSREIIIRDI 767

Query: 852 KCLHHFKNGQCSCGDYW 868
              HHF++G CSCGDYW
Sbjct: 768 NRFHHFRDGTCSCGDYW 784



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 223/489 (45%), Gaps = 32/489 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           N +  +AI V   +   G +     +  ++ AC  S +I   R++HA +  +  E DVF 
Sbjct: 87  NDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFT 146

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y K G +D A  +FE M + ++ +W+A+I     +      +EL   M   GL
Sbjct: 147 ANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGL 206

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+ F+   IL+AC   G F+ G+ +H  +IK        +   ++ +Y K   L  A +
Sbjct: 207 VPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMK 266

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M  +D + WN++ISG    G +DEA  +F  + +E + +   T   +++S   L  
Sbjct: 267 VFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEA 326

Query: 274 CDVAMEMVKRMESLGI-------------------------------TPDVFTWTCMISG 302
                ++    E +G                                + D+   T MI+ 
Sbjct: 327 ASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITA 386

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
            +Q      A+ LF EM   G+ P+   ++S ++AC  L A   G ++H+  +K  F  D
Sbjct: 387 LSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSD 446

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
              GN+L+  Y+KC  +E AE  F  + ++ V SW++MI G  Q G+  +A ELF +M +
Sbjct: 447 AFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVD 506

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
             + PN IT   ++      G  DEA   F  M +   + R    ++ +I    + G+ +
Sbjct: 507 EGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLD 566

Query: 483 NALGVFRKM 491
           +A+ +   M
Sbjct: 567 DAMELVNSM 575



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 151/603 (25%), Positives = 269/603 (44%), Gaps = 89/603 (14%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDM-RERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
           DVFV   L+++Y   G +DDAR VF++   ERN  +W+ ++ AY ++ +  + +++F  M
Sbjct: 41  DVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEM 100

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           V  G+ P +F F  ++ AC    + +AG+ +H++V+++G        N+++ +YVK G++
Sbjct: 101 VWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRV 160

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             A   FE M + D V+WN++ISG    G +  A  L  +M    +   V   + ++++ 
Sbjct: 161 DIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKAC 220

Query: 269 NQLGQCDVAMEMVKRM--------ESLGIT-----------------------PDVFTWT 297
              G  D+  ++   M        + +G+                         D+  W 
Sbjct: 221 AGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWN 280

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            +ISG +  GR  +A  +F  +   G+  N  T+ + + +   L+A +   ++H+LA K+
Sbjct: 281 ALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKI 340

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           GF  D  V N LI+ Y KC  L  A RVF+     D+ +  SMI    Q  +   A +LF
Sbjct: 341 GFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLF 400

Query: 418 IKMQESDVPP-----------------------------------NVITWNVLISGYIQN 442
           ++M    + P                                   +    N L+  Y + 
Sbjct: 401 MEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKC 460

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G+ ++A   F  +      +R   SW+++I G  Q G    AL +F +M      PN +T
Sbjct: 461 GSIEDAELAFSSL-----PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHIT 515

Query: 503 ILSVLPAC--AYLVAS-----NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
           + SVL AC  A LV       N +KE+ G  + R+ E      + +ID   ++G +  + 
Sbjct: 516 MTSVLCACNHAGLVDEAKRYFNSMKEMFG--IDRTEEH----YSCMIDLLGRAGKLDDAM 569

Query: 556 TIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR-GTFLSIILAHSL 613
            + + M    +   W +L+    +H      L      K F L+P + GT + +   ++ 
Sbjct: 570 ELVNSMPFQANASVWGALLGASRVHK--DPELGKLAAEKLFILEPEKSGTHVLLANTYAS 627

Query: 614 AGM 616
           +GM
Sbjct: 628 SGM 630


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  365 bits (937), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 248/864 (28%), Positives = 418/864 (48%), Gaps = 129/864 (14%)

Query: 50  TQGAKVRRNTYINLLQACIDSNSI-HLARK-----LHAFLNLVTEIDVFVKTKLLSVYAK 103
           T  A + +NTY++  +    S SI HLA+      LH F N     D+ + TKL    + 
Sbjct: 13  TTAALISKNTYLDFFK---RSTSISHLAQTHAQIILHGFRN-----DISLLTKLTQRLSD 64

Query: 104 CGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF-FLMVQDGLFPDDFLFPK 162
            G +  AR++F  ++  +++ ++ ++  +S ++     + +F  L     L P+   +  
Sbjct: 65  LGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAF 124

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
            + A     D  AG+++H   +  G                 C              + +
Sbjct: 125 AISAASGFRDDRAGRVIHGQAVVDG-----------------C--------------DSE 153

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVK 282
            +  ++++  YF+    ++A ++FD+M  +                              
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEK------------------------------ 183

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDL 341
                    D   W  MISG+ +N    +++ +F+++ +      +  T+   + A  +L
Sbjct: 184 ---------DTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
           + L +GM+IHSLA K G      V    I++YSKC +++    +F   +  D+ ++N+MI
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMI 294

Query: 402 AGYCQAGYCGKAYELFIKMQESD-----------VPPN-------VITWNVLISGYIQNG 443
            GY   G    +  LF ++  S            VP +        I    L S ++ + 
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHA 354

Query: 444 NEDEAVD-LFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           +   A+  ++ ++ +        ++  +++  SWN++I+GY Q G   +A+ +FR+MQ S
Sbjct: 355 SVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKS 414

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
            F PN VTI  +L ACA L A +  K +H  V     ESS+ V  +LI  YAK G+I  +
Sbjct: 415 EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEA 474

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           R +FD M+ K+ +TWN++I GY LHG    AL++F +M + G+ P   TFL ++ A S A
Sbjct: 475 RRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHA 534

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G+V  G ++F S+   Y   P ++HY+ M+D+ GR+G L+ A++FIE M IEP SS+WE 
Sbjct: 535 GLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWET 594

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           LL ACRIH + +LA    E+LF+L+P +V    L+  I++       A  VR+  ++   
Sbjct: 595 LLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKL 654

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV----------PENVTARSSHSG 784
             + G   IE+    + F +G  S      +Y  L+ +          PE   A      
Sbjct: 655 AKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHD--- 711

Query: 785 LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
             +EEEE+E +  +HSE+LA+AF LI +      IRI+KN+R+C+ CH   K +S +   
Sbjct: 712 --VEEEERELMVKVHSERLAIAFGLIATEPGTE-IRIIKNLRVCLDCHTVTKLISKITER 768

Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
            I + D+   HHFK+G CSCGDYW
Sbjct: 769 VIVVRDANRFHHFKDGVCSCGDYW 792



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 146/308 (47%), Gaps = 12/308 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDV 91
           NG    ++++   +   GA++R +T ++L+     S  + L   +H +    N ++   V
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLIYAIHGYCLKSNFLSHASV 356

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
              T L +VY+K   ++ AR++F++  E++L +W+AMI  Y+++    + + LF  M + 
Sbjct: 357 --STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKS 414

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
              P+      IL AC   G    GK +H LV          V  +++ +Y KCG +  A
Sbjct: 415 EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEA 474

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           RR F+ M +K+ V WN+MISGY   G+  EA  +F +M    I    VTF  ++ + +  
Sbjct: 475 RRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHA 534

Query: 272 GQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G      E+   M    G  P V  + CM+    + G   +AL   + MS   + P    
Sbjct: 535 GLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMS---IEPGSSV 591

Query: 331 ITSAISAC 338
             + + AC
Sbjct: 592 WETLLGAC 599


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  365 bits (937), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 213/589 (36%), Positives = 327/589 (55%), Gaps = 23/589 (3%)

Query: 292  DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
            +V  +  MI  +  N   S AL +FK M+  G+ P+  T    + A +  + L +GM+IH
Sbjct: 1090 NVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIH 1149

Query: 352  SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
            +  V++G   +V VGN LI+MY KC  L  A RV D +  +DV SWNS++AG  + G   
Sbjct: 1150 AAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFD 1209

Query: 412  KAYELFIKMQESDVPPNVITWNVLISGYIQN--GNEDEAVDLFQRMGKNDKVKRNTASWN 469
             A E+  +M+   + P+  T   L+         N     ++F ++       ++  SWN
Sbjct: 1210 DALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLAN-----KSLVSWN 1264

Query: 470  SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
             +IA Y        A+ +F +M+     P+ ++I SVLPAC  L A    + IH  V+R+
Sbjct: 1265 VMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRK 1324

Query: 530  SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
             L+ +L + N+LID YAK G + Y+R +FD M  +D+++W S+I  Y ++G    A+ LF
Sbjct: 1325 RLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLF 1384

Query: 590  DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
             +M+  GL P+   F+S++ A S AG++D G+  F  +TE  +I+P IEH+  M+DL GR
Sbjct: 1385 SRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGR 1444

Query: 650  SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
            +G+++EA  FI+ MP+EP+  +W ALL+ACR++ N+ + +LA ++LF L P       L+
Sbjct: 1445 AGQVDEAYGFIKQMPMEPNERVWGALLSACRVYSNMIIGLLAADQLFQLCPEQSGYYVLL 1504

Query: 710  LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
              IYA  G+ ED   VR + +    +   G    E+ N V+TF+ G  S   S  +Y  L
Sbjct: 1505 SNIYAKAGRWEDVTTVRSIMKTKGIKKMPGVSNFELDNRVHTFLAGDQSHPQSKQIYEEL 1564

Query: 770  Q----------NVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTI 819
                        VPE  +A        +EEE+KE    +HSEKLA+AFA++ ++     I
Sbjct: 1565 DVLVGKMKEAGYVPETDSALHD-----VEEEDKECHLAVHSEKLAIAFAILNTAPG-SPI 1618

Query: 820  RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            RI KN+R+C  CH  AK +S +   EI + D+   HHF NG CSCGDYW
Sbjct: 1619 RITKNLRVCGDCHIAAKLISKIVGREITIRDTNRFHHFYNGVCSCGDYW 1667



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 229/452 (50%), Gaps = 8/452 (1%)

Query: 62   NLLQACIDSNS-IHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
            NL    +D N  I   +KLH+ + +  ++  +  +  KL+  YA CG     R +F+++ 
Sbjct: 1028 NLCGQILDKNPDIKYLKKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIFDEIP 1087

Query: 119  ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
            ++N+  ++ MI +Y  +  + + + +F  M   G+ PD + +P +L+A     D   G  
Sbjct: 1088 KKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQ 1147

Query: 179  MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
            +H+ V+++G+     V N ++++Y KCG L+ A R  + M  +D V+WNS+++G  + G+
Sbjct: 1148 IHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQ 1207

Query: 239  NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
             D+A  +  +M    +K    T   L+ +      C   +  VK M        + +W  
Sbjct: 1208 FDDALEVCKEMELLGLKPDAGTMASLLPAVTN--TCLDNVSFVKEMFMKLANKSLVSWNV 1265

Query: 299  MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
            MI+ +  N   ++A+D+F +M    V P+ ++I S + AC DL AL +G  IH   V+  
Sbjct: 1266 MIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKR 1325

Query: 359  FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
               ++L+ N+LI+MY+KC  LE A  VFD +K +DV SW SMI+ Y   G    A  LF 
Sbjct: 1326 LQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGKGRDAVSLFS 1385

Query: 419  KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
            +MQ+  + P+ I +  ++S     G  DE    F+ M +  K+      +  ++    + 
Sbjct: 1386 RMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRA 1445

Query: 479  GQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            GQ + A G  ++M      PN     ++L AC
Sbjct: 1446 GQVDEAYGFIKQMP---MEPNERVWGALLSAC 1474



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 11/220 (5%)

Query: 500  CVTILSVLPACAYLVASNKVKEIHGCV-LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
            C  IL   P   YL      K++H  + +   L S+  +   L+  YA  G    +R IF
Sbjct: 1030 CGQILDKNPDIKYL------KKLHSKICIDHDLHSNPSLGIKLMRAYAVCGEPWSTRHIF 1083

Query: 559  DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
            D +  K+++ +N +I  YV +  +  AL +F  M   G+ P+  T+  ++ A S +  + 
Sbjct: 1084 DEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLW 1143

Query: 619  LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            +G ++  ++      + +    + +I +YG+ G L EA   +++MP   D   W +L+  
Sbjct: 1144 VGMQIHAAVVRVGLDLNVFVG-NGLISMYGKCGCLVEACRVLDZMPCR-DVVSWNSLVAG 1201

Query: 679  CRIHGNID--LAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
            C  +G  D  L V     L  L+P    +  L+  +   C
Sbjct: 1202 CARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTC 1241


>gi|115463499|ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
 gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa Japonica Group]
 gi|113578900|dbj|BAF17263.1| Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score =  365 bits (937), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 215/654 (32%), Positives = 342/654 (52%), Gaps = 48/654 (7%)

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM 280
           +D    +S++  Y + G   +A  + D M        VV ++ LI ++   G  + A  +
Sbjct: 53  RDAFVASSLLHAYLRFGATADARSVLDGMPHRT----VVGWSALIAAHASHGDAEGAWGL 108

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
           ++RM S G+ P+V TW  ++SG  ++GR   A+     M   G +P+   ++ A+SA  D
Sbjct: 109 LERMRSDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGD 168

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
           +  +A+G ++H   VK G   D  V  +LI+MY KC   +   RVFD     D       
Sbjct: 169 VGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKCGRADEIVRVFDESSHMD------- 221

Query: 401 IAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQR-MGKND 459
                                       V + N L++G  +N    EA+ LF+  +G+  
Sbjct: 222 ----------------------------VASCNALVAGLSRNAQVSEALRLFREFVGRG- 252

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
            ++ N  SW S++A   Q G+   A+ +FR+MQS    PN VTI  VLPA A + A    
Sbjct: 253 -IELNVVSWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHG 311

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
           +  H   LR+     + V ++L+D YAK G +  +R IF+ M  +++++WN++I GY +H
Sbjct: 312 RSAHCFSLRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMH 371

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
           G    A+ LF  M+S   KP+  TF  ++ A S AG  + G+  F  +   + I P +EH
Sbjct: 372 GEAENAVRLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEH 431

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
           Y+ M+ L GR+GKL++A + I  MP EPD  IW +LL +CR+HGN+ LA +A E LF LE
Sbjct: 432 YACMVTLLGRAGKLDDAYDIINQMPFEPDGCIWGSLLGSCRVHGNVVLAEVAAENLFQLE 491

Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSE 759
           P +     L+  IYA     +   ++R + +    +   G  WIE+KN V+  + G  S 
Sbjct: 492 PENAGNYVLLSNIYASKKMWDGVNRLRDMMKTVGLKKEKGCSWIEIKNKVHMLLAGDSSH 551

Query: 760 SYSDLLYSWLQNVPENVT----ARSSHSGLC-IEEEEKEEISGIHSEKLALAFALIGSSQ 814
                +   L+++   +     A S+   L  +EE+EK++I  +HSEKLA+A  LI +S 
Sbjct: 552 PMMAAITEKLKHLTMEMRRLGFAPSTDYVLHDVEEQEKDDILSVHSEKLAVALGLISTSH 611

Query: 815 APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
               ++++KN+R+C  CHE  K++S     EI++ D+   HHFK+G+CSC DYW
Sbjct: 612 GT-PLQVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGKCSCADYW 664



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 138/550 (25%), Positives = 225/550 (40%), Gaps = 109/550 (19%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYS---------------- 133
           D FV + LL  Y + G   DAR V + M  R +  WSA+I A++                
Sbjct: 54  DAFVASSLLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMR 113

Query: 134 -------------------RDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE 174
                              R  R R+ V     M  +G  PD       L A G+ GD  
Sbjct: 114 SDGVEPNVITWNGLVSGLNRSGRARDAVLALVRMHGEGFLPDATGVSCALSAVGDVGDVA 173

Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
            G+ +H  V+K G      V  +++ +Y KCG+                           
Sbjct: 174 VGEQLHGYVVKAGCRLDACVATALIDMYGKCGRA-------------------------- 207

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                DE  R+FD    E   + V + N L+   ++  Q   A+ + +     GI  +V 
Sbjct: 208 -----DEIVRVFD----ESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVV 258

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +WT +++   QNGR  +A+DLF+EM   G+ PN VTI   + A  ++ AL  G   H  +
Sbjct: 259 SWTSIVACCVQNGRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFS 318

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           ++ GF  D+ VG++L++MY+KC  +  A  +F+ +  ++V SWN+MI GY   G    A 
Sbjct: 319 LRKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVSWNAMIGGYAMHGEAENAV 378

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
            LF  MQ S   P+++T+  ++    Q G  +E    F  M     +      +  ++  
Sbjct: 379 RLFRSMQSSKEKPDLVTFTCVLGACSQAGWTEEGRSYFNEMQHKHGISPRMEHYACMVTL 438

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL--RRSLE 532
             + G+ ++A  +  +M    F P+     S+L +C           +HG V+    + E
Sbjct: 439 LGRAGKLDDAYDIINQMP---FEPDGCIWGSLLGSC----------RVHGNVVLAEVAAE 485

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
           +   +       Y    NI  S+ ++DG++                         L D M
Sbjct: 486 NLFQLEPENAGNYVLLSNIYASKKMWDGVNR------------------------LRDMM 521

Query: 593 KSFGLKPNRG 602
           K+ GLK  +G
Sbjct: 522 KTVGLKKEKG 531



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 100/427 (23%), Positives = 167/427 (39%), Gaps = 91/427 (21%)

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
           TS  L+  + +SF    P+   + SA+ +C+ L+         + A   G + D  V +S
Sbjct: 7   TSSVLNFLRHVSFP---PDPRLLPSALKSCSALRLARALH---AAAAVAGVSRDAFVASS 60

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           L++ Y +      A  V D +  + V  W+++IA +   G    A+ L  +M+   V PN
Sbjct: 61  LLHAYLRFGATADARSVLDGMPHRTVVGWSALIAAHASHGDAEGAWGLLERMRSDGVEPN 120

Query: 429 VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
           VITWN L+SG  ++G   +AV    R                                  
Sbjct: 121 VITWNGLVSGLNRSGRARDAVLALVR---------------------------------- 146

Query: 489 RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
             M    F P+   +   L A   +      +++HG V++        V  +LID Y K 
Sbjct: 147 --MHGEGFLPDATGVSCALSAVGDVGDVAVGEQLHGYVVKAGCRLDACVATALIDMYGKC 204

Query: 549 GNIVYSRTIFDGMSSKDIITWNSLICG----------------YVLHGF------WHA-- 584
           G       +FD  S  D+ + N+L+ G                +V  G       W +  
Sbjct: 205 GRADEIVRVFDESSHMDVASCNALVAGLSRNAQVSEALRLFREFVGRGIELNVVSWTSIV 264

Query: 585 -----------ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
                      A+DLF +M+S G++PN     S+ +   L    ++   +      C+ +
Sbjct: 265 ACCVQNGRDLEAVDLFREMQSEGIEPN-----SVTIPCVLPAFANIAALMHGRSAHCFSL 319

Query: 634 IPMIEH----YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
                H     SA++D+Y + G++ +A    E MP     S W A++    +HG  + AV
Sbjct: 320 RKGFHHDIYVGSALVDMYAKCGRVRDARMIFEAMPYRNVVS-WNAMIGGYAMHGEAENAV 378

Query: 690 LAIERLF 696
               RLF
Sbjct: 379 ----RLF 381


>gi|357516987|ref|XP_003628782.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522804|gb|AET03258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1002

 Score =  365 bits (936), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 243/789 (30%), Positives = 405/789 (51%), Gaps = 53/789 (6%)

Query: 28  HLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---N 84
            + FLC N +L EAI+ L  +  Q   +  + Y  LLQ C+ +  + L  ++HA L    
Sbjct: 75  QISFLCKNLKLQEAISTLSQLP-QHTPIGPDIYGELLQGCVYARDLSLGLQIHAHLIKKG 133

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM-RERNLYTWSAMIGAYSRDQRWREVVE 143
                + FV++KL+ +YAKC     A   F ++ + +NL++++A++G  +R+  ++E + 
Sbjct: 134 SSYSTNEFVESKLVILYAKCNLTRVAVHFFRNVVKNQNLFSYAAIVGLQARNGLYKEALL 193

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM---SCVRRVRNSVLA 200
            +  M++ G  PD+F+ P  L+ACG       G+ +H  V+K+G     CV  V  S++ 
Sbjct: 194 SYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRGIHGFVVKMGNEFDGCVY-VATSLVD 252

Query: 201 VYVKCGKLIWARRFFESMD--EKDGVAWNSMISGYFQIGENDEAHRLFDKM--------- 249
           +Y KCG L  A + F+ M   +++ V WNSMI GY Q G N EA  LF+KM         
Sbjct: 253 MYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPS 312

Query: 250 ---------------CREEIKLG-----VVTFNI-------LIRSYNQLGQCDVAMEMVK 282
                            EE K G     ++ F +       ++  Y+++G  +  +E+V 
Sbjct: 313 EVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIE-EVELVF 371

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDL 341
           R  S+ +  D  TW  MIS + Q G   +AL++   M     +  + VT++S ++   D 
Sbjct: 372 R--SMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADT 429

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI-KDKDVYSWNSM 400
           + + +G ++H   ++  F  D+ V + +++MY+KC  ++ A  VF    K KD+  WN+M
Sbjct: 430 RDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTM 489

Query: 401 IAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDK 460
           +A   + G  G+A +LF +MQ   VPPNV++WN LI G+ +NG   EA D+F  M +   
Sbjct: 490 LAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEM-QLSG 548

Query: 461 VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
           V  N  +W ++I+G  Q G    A  VF++MQ +   PN ++I S L AC  +   N  +
Sbjct: 549 VTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGR 608

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
            IHG V+R  +  SL +  S+ID YAK GN+  ++ +F   S+K++  +N++I  Y  HG
Sbjct: 609 SIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHG 668

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
               AL LF ++   G+ P+  TF S++ A S   ++  G ++F  +    Q+ P  +HY
Sbjct: 669 KSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHY 728

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
             ++ L    G+L+EA+  I  MP  PD+ I  +LL AC  +   +LA    + L  +EP
Sbjct: 729 GCLVKLLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQNHETELANYIAKWLLKVEP 788

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
            +      +  +YA  GK ++   +R   +E   +   G  WIEV   +  F+    S  
Sbjct: 789 NNPGNYVALSNVYAALGKWDEVSNIRGFMKEKGLKKIPGCSWIEVGQELNVFIASDKSHP 848

Query: 761 YSDLLYSWL 769
             + +Y  L
Sbjct: 849 EKEEIYKIL 857



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 8/197 (4%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTY--INLLQACIDSNSIHLARKLHAFL- 83
           T +  L  NG   EA  V   +  QGA +R N+    + L AC +   ++  R +H ++ 
Sbjct: 558 TMISGLAQNGLGYEASRVFQQM--QGAGMRPNSISITSALSACTNMALLNYGRSIHGYVM 615

Query: 84  -NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
            N ++   + + T ++ +YAKCG LDDA+ VF     + L  ++AMI AY+   +  E +
Sbjct: 616 RNFMS-FSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHGKSAEAL 674

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAV 201
            LF  +V+ G+ PD   F  +L AC +    + G +L   +V +L M    +    ++ +
Sbjct: 675 ALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHYGCLVKL 734

Query: 202 YVKCGKLIWARRFFESM 218
               G+L  A R   +M
Sbjct: 735 LTNDGQLDEALRIILTM 751


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 233/782 (29%), Positives = 381/782 (48%), Gaps = 118/782 (15%)

Query: 128 MIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
           M+G +++   +      F  +++ G  PD++  P +++AC +  + + G+L+H +V K G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 188 MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
           +                               + D     +++  Y +  E ++A  LFD
Sbjct: 61  L-------------------------------DLDHFVCAALVDMYVKCREIEDARFLFD 89

Query: 248 KMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
           KM                                          D+ TWT MI G+A+ G
Sbjct: 90  KMQER---------------------------------------DLVTWTVMIGGYAECG 110

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
           + +++L LF++M   GV+P+ V + + + AC  L A+     I     +  F  DV++G 
Sbjct: 111 KANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGT 170

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           ++I+MY+KC  +E+A  +FD +++K+V SW++MIA Y   G   KA +LF  M  S + P
Sbjct: 171 AMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLP 230

Query: 428 NVITWN-----------------------------------VLISGYIQNGNEDEAVDLF 452
           + IT                                      L+  Y +    ++A  LF
Sbjct: 231 DKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLF 290

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
            +M + D V     +W  +I GY + G  N +L +F KM+     P+ V +++V+ ACA 
Sbjct: 291 DKMPERDLV-----TWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAK 345

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 572
           L A +K + I   + R+  +  + +  ++ID +AK G +  +R IFD M  K++I+W+++
Sbjct: 346 LGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAM 405

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQ 632
           I  Y  HG    ALDLF  M   G+ PN+ T +S++ A S AG+V+ G + F  + E Y 
Sbjct: 406 IAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYS 465

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAI 692
           +   ++HY+ ++DL GR+G+L+EA++ IE M +E D  +W A L ACR H ++ LA  A 
Sbjct: 466 VRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAA 525

Query: 693 ERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTF 752
             L +L+P +     L+  IYA  G+ ED  K R L  +   +   G  WIEV N  + F
Sbjct: 526 TSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQF 585

Query: 753 VTGGWSESYSDLLYSWLQNVPEN--VTARSSHSGLCIEEEEKEEISGI---HSEKLALAF 807
             G  +   S  +Y  L+++     +      +   + + ++E   GI   HSEKLA+AF
Sbjct: 586 SVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAF 645

Query: 808 ALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGD 866
            LI + +  HT IRI+KN+R+C  CH   K VS +    I + D+   HHFK G CSCGD
Sbjct: 646 GLIATPE--HTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGD 703

Query: 867 YW 868
           YW
Sbjct: 704 YW 705



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 233/472 (49%), Gaps = 32/472 (6%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDA 110
           GA+    T   +++AC D  ++ + R +H  +     ++D FV   L+ +Y KC  ++DA
Sbjct: 25  GARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDA 84

Query: 111 REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
           R +F+ M+ER+L TW+ MIG Y+   +  E + LF  M ++G+ PD      ++ AC   
Sbjct: 85  RFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKL 144

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
           G     +++   + +        +  +++ +Y KCG +  AR  F+ M+EK+ ++W++MI
Sbjct: 145 GAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMI 204

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN-----QLGQ------------ 273
           + Y   G+  +A  LF  M    +    +T   L+ + +     Q+G+            
Sbjct: 205 AAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLD 264

Query: 274 -----CDVAMEMVKRMESLGIT---------PDVFTWTCMISGFAQNGRTSQALDLFKEM 319
                C   ++M  +   +             D+ TWT MI G+A+ G  +++L LF +M
Sbjct: 265 LDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKM 324

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
              GV+P+ V + + + AC  L A+     I     +  F  DV++G ++I+M++KC  +
Sbjct: 325 REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV 384

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
           E+A  +FD +++K+V SW++MIA Y   G   KA +LF  M  S + PN IT   L+   
Sbjct: 385 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYAC 444

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
              G  +E +  F  M ++  V+ +   +  ++    + G+ + AL +   M
Sbjct: 445 SHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESM 496



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 207/409 (50%), Gaps = 43/409 (10%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           G+ NE++ + + +  +G    +   + ++ AC    ++H AR +  ++     ++DV + 
Sbjct: 110 GKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG 169

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T ++ +YAKCGC++ ARE+F+ M E+N+ +WSAMI AY    + R+ ++LF +M+  G+ 
Sbjct: 170 TAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGML 229

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD      +L AC +  + + G+L+H +V K G+     V  +++ +Y KC ++  AR  
Sbjct: 230 PDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFL 289

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------C------ 250
           F+ M E+D V W  MI GY + G  +E+  LFDKM                  C      
Sbjct: 290 FDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAM 349

Query: 251 -----------REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                      R++ +L V+    +I  + + G  + A E+  RME      +V +W+ M
Sbjct: 350 HKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEE----KNVISWSAM 405

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK-MG 358
           I+ +  +G+  +ALDLF  M   G++PN +T+ S + AC+    +  G+   SL  +   
Sbjct: 406 IAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYS 465

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAGYCQ 406
              DV     ++++  +   L+ A ++ + M  +KD   W + + G C+
Sbjct: 466 VRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFL-GACR 513


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  364 bits (935), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 240/795 (30%), Positives = 385/795 (48%), Gaps = 105/795 (13%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMR--ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           T L++ YA    L  A   F+ +    R+    +A+I AY+R       V +F  ++  G
Sbjct: 92  TSLVAAYAAADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASG 151

Query: 153 -LFPDDFLFPKILQACGNCGDFEAGKL--MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            L PDD+ F  +L A G+  +        +H  V+K G      V N+++A+Y+KC    
Sbjct: 152 SLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPE 211

Query: 210 W---ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
               AR+  + M  KD + W +M+ GY + G+   A  +F     EE+            
Sbjct: 212 ATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVF-----EEVD----------- 255

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
                G+ DV                   W  MISG+  +G   +A +LF+ M    V  
Sbjct: 256 -----GKFDV------------------VWNAMISGYVHSGMAVEAFELFRRMVLERVPL 292

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKM--GFTDD--VLVGNSLINMYSKCEELEAA 382
           +  T TS +SAC ++   A G  +H   +++   F  +  + V N+L+  YSKC  +  A
Sbjct: 293 DEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVA 352

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
            R+FD +  KD                                   V++WN ++SGY+++
Sbjct: 353 RRIFDNMTLKD-----------------------------------VVSWNTILSGYVES 377

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
              D+AV++F+ M       +N  SW  +++GY   G   +AL +F KM+S    P   T
Sbjct: 378 SCLDKAVEVFEEMPY-----KNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYT 432

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
               + AC  L A    K++HG +++   E S    N+LI  YA+ G +  +  +F  M 
Sbjct: 433 YAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMP 492

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
           + D ++WN++I     HG    AL+LFD+M + G+ P+R +FL+++ A + +G+VD G +
Sbjct: 493 NIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFR 552

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F S+   + IIP  +HY+ +IDL GR+G++ EA + I+ MP EP  SIWEA+L+ CR  
Sbjct: 553 YFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTS 612

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
           G+++L   A ++LF + P       L+   Y+  G   DA +VRKL R+   +   G  W
Sbjct: 613 GDMELGAHAADQLFKMTPQHDGTYILLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCSW 672

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKE 793
           IE  N V+ F+ G      +  +Y +L    E V A+    G           +E  +KE
Sbjct: 673 IEAGNKVHVFLVGDTKHPEAHEVYKFL----EMVGAKMRKLGYVPDTKVVLHDMEPHQKE 728

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
            I   HSE+LA+ F L+       T+ ++KN+R+C  CH    ++S     EI + D + 
Sbjct: 729 HILFAHSERLAVGFGLLNLPPGA-TVTVLKNLRICDDCHAAIMFMSKAVGREIVVRDVRR 787

Query: 854 LHHFKNGQCSCGDYW 868
            HHFK+G+CSCG+YW
Sbjct: 788 FHHFKDGECSCGNYW 802



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 212/457 (46%), Gaps = 49/457 (10%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           N  + L   C    +   ARK+   L+ +   D    T ++  Y + G +  AR VFE++
Sbjct: 198 NALVALYMKCESPEATRDARKV---LDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEV 254

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             +    W+AMI  Y       E  ELF  MV + +  D+F F  +L AC N G F  GK
Sbjct: 255 DGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGK 314

Query: 178 LMHSLVIKLGMSCVRR----VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
            +H  +I+L  + V      V N+++  Y KCG +  ARR F++M  KD V+WN+++SGY
Sbjct: 315 SVHGQIIRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGY 374

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
            +    D+A  +F++M  +      +++ +++  Y   G  + A+++  +M S  + P  
Sbjct: 375 VESSCLDKAVEVFEEMPYKN----ELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCD 430

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
           +T+                                     AI+AC +L AL  G ++H  
Sbjct: 431 YTY-----------------------------------AGAIAACGELGALKHGKQLHGH 455

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            V++GF      GN+LI MY++C  ++ A  +F ++ + D  SWN+MI+   Q G+  +A
Sbjct: 456 IVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREA 515

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            ELF +M    + P+ I++  +++    +G  DE    F+ M ++  +      +  LI 
Sbjct: 516 LELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLID 575

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
              + G+   A  + + M    F P      ++L  C
Sbjct: 576 LLGRAGRIGEARDLIKTMP---FEPTPSIWEAILSGC 609



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 161/367 (43%), Gaps = 15/367 (4%)

Query: 31  FLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID 90
           F  G     + I +  +   + A    N  +     C    +I +AR++  F N+  + D
Sbjct: 310 FAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKC---GNIAVARRI--FDNMTLK-D 363

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           V     +LS Y +  CLD A EVFE+M  +N  +W  M+  Y       + ++LF  M  
Sbjct: 364 VVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRS 423

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + + P D+ +   + ACG  G  + GK +H  +++LG        N+++ +Y +CG +  
Sbjct: 424 ENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKE 483

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A   F  M   D V+WN+MIS   Q G   EA  LFD+M  E I    ++F  ++ + N 
Sbjct: 484 AHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNH 543

Query: 271 LGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G  D      + M+   GI P    +T +I    + GR  +A DL K M F    P   
Sbjct: 544 SGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPF---EPTPS 600

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFD 387
              + +S C     + +G        KM    D   G  ++  N YS       A RV  
Sbjct: 601 IWEAILSGCRTSGDMELGAHAADQLFKMTPQHD---GTYILLSNTYSAAGCWVDAARVRK 657

Query: 388 MIKDKDV 394
           +++D+ V
Sbjct: 658 LMRDRGV 664



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 79/349 (22%), Positives = 145/349 (41%), Gaps = 48/349 (13%)

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALG 486
           P  ++   L++ Y        AV  F  +      +R+T   N++I+ Y +      A+ 
Sbjct: 86  PCPVSATSLVAAYAAADRLPAAVSFFDAV---PPARRDTVLHNAVISAYARASHAAPAVA 142

Query: 487 VFRKM-QSSCFYPNCVTILSVLPACAYL--VASNKVKEIHGCVLRRSLESSLPVMNSLID 543
           VFR +  S    P+  +  ++L A  +L  ++     ++H  VL+     +L V N+L+ 
Sbjct: 143 VFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVA 202

Query: 544 TYAKSGNIVYSR---TIFDGMSSKDIITWNSLICGYVLHG------------------FW 582
            Y K  +   +R    + D M +KD +TW +++ GYV  G                   W
Sbjct: 203 LYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVW 262

Query: 583 HA-------------ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
           +A             A +LF +M    +  +  TF S++ A +  G+   GK V   I  
Sbjct: 263 NAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIR 322

Query: 630 CY-QIIP--MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
                +P   +   +A++  Y + G +  A    ++M ++ D   W  +L+       +D
Sbjct: 323 LQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLK-DVVSWNTILSGYVESSCLD 381

Query: 687 LAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV-RKLERENTR 734
            AV   E   ++   + L   +++  Y   G  EDALK+  K+  EN +
Sbjct: 382 KAVEVFE---EMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVK 427


>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
          Length = 2355

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 207/581 (35%), Positives = 325/581 (55%), Gaps = 18/581 (3%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG--VTITSAISACTDLKALAMGM 348
           P++F +  ++  F+Q+      +  F     +   PN    T TS + AC  L  +  G 
Sbjct: 88  PNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQ 147

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           ++H    K G   ++ V NSL+++Y K      A+++FD +  +DV SWN++I+GYC +G
Sbjct: 148 KVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSG 207

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
              KA  +F  M E     N+++W+ +ISGY + GN +EA  LF+ M       RN  SW
Sbjct: 208 MVDKARMVFDGMMEK----NLVSWSTMISGYARVGNLEEARQLFENMPM-----RNVVSW 258

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQ-SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           N++IAGY Q  +  +A+ +FR+MQ      PN VT++SVL ACA+L A +  K IH  + 
Sbjct: 259 NAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIR 318

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           R  +E  L + N+L D YAK G ++ ++ +F  M  +D+I+W+ +I G  ++G+ + A +
Sbjct: 319 RNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFN 378

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
            F +M   GL+PN  +F+ ++ A + AG+VD G + F  + + Y I P IEHY  ++DL 
Sbjct: 379 FFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLL 438

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
            R+G+L++A   I  MP++P+  +W ALL  CRI+ + +     + R+ +L+        
Sbjct: 439 SRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLV 498

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
            +  +YA  G+ +DA   R   R+N    + G  WIE+ N VY F  G  S   S  +YS
Sbjct: 499 YLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYS 558

Query: 768 WLQNV--PENVTARSSHSGLC---IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
            ++ +     V      + L    I+EEEKE+    HSEKLALAF LI +S+   TIRIV
Sbjct: 559 MIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGT-TIRIV 617

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCS 863
           KN+R+C  CH+  K +S +   EI + D    HHFK+G+CS
Sbjct: 618 KNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCS 658



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 205/393 (52%), Gaps = 14/393 (3%)

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFF--LMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           N++ ++A++ A+S+   W   +  F   L++ +   PD++ F  +L+AC        G+ 
Sbjct: 89  NIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQK 148

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H  V K G      VRNS++ +Y K G    A++ F+ M  +D V+WN++ISGY   G 
Sbjct: 149 VHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGM 208

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
            D+A  +FD M    ++  +V+++ +I  Y ++G  + A ++ + M       +V +W  
Sbjct: 209 VDKARMVFDGM----MEKNLVSWSTMISGYARVGNLEEARQLFENMP----MRNVVSWNA 260

Query: 299 MISGFAQNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           MI+G+AQN + + A++LF++M    G+ PN VT+ S +SAC  L AL +G  IH    + 
Sbjct: 261 MIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRN 320

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
                + +GN+L +MY+KC  +  A+ VF  + ++DV SW+ +I G    GY  +A+  F
Sbjct: 321 KIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFF 380

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
            +M E  + PN I++  L++     G  D+ ++ F  M +   +      +  ++    +
Sbjct: 381 AEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSR 440

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            G+ + A  +   M      PN +   ++L  C
Sbjct: 441 AGRLDQAESLINSMP---MQPNVIVWGALLGGC 470



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 152/357 (42%), Gaps = 68/357 (19%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTKLLSVYAKCGC----------- 106
           T+ ++L+AC     +   +K+H F+     E ++FV+  L+ +Y K GC           
Sbjct: 129 TFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEM 188

Query: 107 --------------------LDDAREVFEDMRERNLYTWSAMIGAYSR------------ 134
                               +D AR VF+ M E+NL +WS MI  Y+R            
Sbjct: 189 VVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFE 248

Query: 135 -------------------DQRWREVVELFFLMVQD-GLFPDDFLFPKILQACGNCGDFE 174
                              ++++ + +ELF  M  + GL P+D     +L AC + G  +
Sbjct: 249 NMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALD 308

Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
            GK +H  + +  +     + N++  +Y KCG ++ A+  F  M E+D ++W+ +I G  
Sbjct: 309 LGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLA 368

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDV 293
             G  +EA   F +M  + ++   ++F  L+ +    G  D  +E    M  + GITP +
Sbjct: 369 MYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKI 428

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
             + C++   ++ GR  QA  L   M    + PN +   + +  C   K    G  +
Sbjct: 429 EHYGCVVDLLSRAGRLDQAESLINSMP---MQPNVIVWGALLGGCRIYKDAERGERV 482



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 101/202 (50%), Gaps = 4/202 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRN-TYINLLQACIDSNSIHLARKLHAFLNL-VTEIDVF 92
           N +  +AI +   +  +G     + T +++L AC    ++ L + +H F+     E+ +F
Sbjct: 268 NEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLF 327

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           +   L  +YAKCGC+ +A+ VF +M ER++ +WS +I   +      E    F  M++DG
Sbjct: 328 LGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDG 387

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL-GMSCVRRVRNSVLAVYVKCGKLIWA 211
           L P+D  F  +L AC + G  + G     ++ ++ G++        V+ +  + G+L  A
Sbjct: 388 LEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQA 447

Query: 212 RRFFESMD-EKDGVAWNSMISG 232
                SM  + + + W +++ G
Sbjct: 448 ESLINSMPMQPNVIVWGALLGG 469



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 105/232 (45%), Gaps = 10/232 (4%)

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP--VMNSLIDTYAKSGNIVYSRT 556
           N    + +L  CA  ++  ++ EI   ++   + S  P  +    I   +  GN+ +S  
Sbjct: 20  NHRKTIHLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVL 79

Query: 557 IFDG-MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG--TFLSIILAHSL 613
           IF+  +S  +I  +N+L+  +  H  WH  +  F+        PN    TF S++ A + 
Sbjct: 80  IFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAG 139

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
              V  G+KV C +T+ Y     +   ++++DLY + G    A +  ++M +  D   W 
Sbjct: 140 LAQVLEGQKVHCFVTK-YGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR-DVVSWN 197

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
            L++     G +D A +  + + +    +++    ++  YA  G  E+A ++
Sbjct: 198 TLISGYCFSGMVDKARMVFDGMME---KNLVSWSTMISGYARVGNLEEARQL 246


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 251/873 (28%), Positives = 398/873 (45%), Gaps = 172/873 (19%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T +++ Y  CG   DA  V E +       W+ ++  + ++      + +   M++ G  
Sbjct: 87  TGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTK 146

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD F  P  L+ACG    +  G+ +H      G+ C     ++V                
Sbjct: 147 PDHFTLPYALKACGELPSYCCGRALH------GLICCNGFESNVFVC------------- 187

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
                       N++++ Y + G  ++A  +FD++ R+ I                    
Sbjct: 188 ------------NALVAMYSRCGSLEDASLVFDEITRKGID------------------- 216

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV------GVMPNG 328
                            DV +W  +++   +      AL+LF EMS +          + 
Sbjct: 217 -----------------DVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDI 259

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
           ++I + + AC  LKAL    EIHS A++ G   D  V N+LI+ Y+KC  +  A +VF++
Sbjct: 260 ISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNV 319

Query: 389 IKDKDVYSWNSM-----------------------------------IAGYCQAGYCGKA 413
           ++ KDV SWN+M                                   IAGY Q G   +A
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEA 379

Query: 414 YELFIKMQESDVPPNVITWNVLIS-----GYIQNGNEDEA-------------------- 448
            + F +M      PN +T   L+S     G +  G E  A                    
Sbjct: 380 LDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDG 439

Query: 449 ---------VDLFQR----------MGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
                    +D++ +               + +RN  +W  +I GY Q G  N+AL +F 
Sbjct: 440 EDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFS 499

Query: 490 KMQSSCFY--PNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLP-VMNSLIDTY 545
           +M S  +   PN  TI  +L ACA+L A    K+IH  V R    E S+  V N LID Y
Sbjct: 500 EMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMY 559

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
           +K G++  +R +FD M  ++ ++W S++ GY +HG    ALD+FD+M+  G  P+  +FL
Sbjct: 560 SKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFL 619

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
            ++ A S +GMVD G   F  +   Y ++   EHY+ +IDL  R G+L++A + I++MP+
Sbjct: 620 VLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPM 679

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
           EP + IW ALL+ACR+H N++LA  A+ +L +++  +     LI  IYA   + +D  ++
Sbjct: 680 EPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNIYANARRWKDVARI 739

Query: 726 RKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPEN 775
           R+L +++  +   G  W++ K    +F  G  S   S  +YS L+           VPE 
Sbjct: 740 RQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPET 799

Query: 776 VTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETA 835
             A        +++EEK  +   HSEKLALA+ L+ +S     IRI KN+R+C  CH   
Sbjct: 800 NFALHD-----VDDEEKNNLLSEHSEKLALAYGLLTTSPGC-PIRITKNLRVCGDCHSAF 853

Query: 836 KYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            Y+S +   EI + DS   HHFKNG CSCG YW
Sbjct: 854 TYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 152/535 (28%), Positives = 246/535 (45%), Gaps = 93/535 (17%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           G L+ AI V   +   G K    T    L+AC +  S    R LH  +     E +VFV 
Sbjct: 128 GHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVC 187

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRER---NLYTWSAMIGAYSRDQRWREVVELF---FLM 148
             L+++Y++CG L+DA  VF+++  +   ++ +W++++ A+ +    R  +ELF    ++
Sbjct: 188 NALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMI 247

Query: 149 VQDGLF---PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
           V +       D      IL AC +       K +HS  I+ G      V N+++  Y KC
Sbjct: 248 VHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKC 307

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G +  A + F  M+ KD V+WN+M++GY Q G    A  LF+ M +E I L V+T++ +I
Sbjct: 308 GSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVI 367

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             Y Q G    A++  ++M   G  P+  T   ++S                        
Sbjct: 368 AGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLS------------------------ 403

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD------------DVLVGNSLINMY 373
                      AC  L AL+ GMEIH+ ++K                 D++V N+LI+MY
Sbjct: 404 -----------ACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMY 452

Query: 374 SKCEELEAAERVFDMI--KDKDVYSWNSMIAGYCQAGYCGKAYELFIKM--QESDVPPNV 429
           SKC   +AA  +FD I  ++++V +W  MI GY Q G    A ++F +M  +   V PN 
Sbjct: 453 SKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNA 512

Query: 430 ITWNVL---------------ISGYIQNGNEDEA---------VDLFQRMGKNDKV---- 461
            T + +               I  Y+   +E E          +D++ + G  D      
Sbjct: 513 YTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVF 572

Query: 462 ----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
               KRN  SW S+++GY   G+   AL +F KMQ + F P+ ++ L +L AC++
Sbjct: 573 DSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSH 627



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 151/323 (46%), Gaps = 23/323 (7%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF------LNL---- 85
           G   EA+     +   G++    T I+LL AC    ++    ++HA+      L+L    
Sbjct: 374 GCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDF 433

Query: 86  ---VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM--RERNLYTWSAMIGAYSRDQRWRE 140
                  D+ V   L+ +Y+KC     AR +F+ +  RERN+ TW+ MIG Y++     +
Sbjct: 434 GGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSND 493

Query: 141 VVELFFLMVQD--GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG--MSCVRRVRN 196
            +++F  M+     + P+ +    IL AC +      GK +H+ V +       V  V N
Sbjct: 494 ALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVAN 553

Query: 197 SVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL 256
            ++ +Y KCG +  AR  F+SM +++ V+W SM+SGY   G   EA  +FDKM +     
Sbjct: 554 CLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVP 613

Query: 257 GVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             ++F +L+ + +  G  D  +     M     +      + C+I   A+ GR  +A   
Sbjct: 614 DDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKT 673

Query: 316 FKEMSFVGVMPNGVTITSAISAC 338
            +EM    + P+ V   + +SAC
Sbjct: 674 IQEMP---MEPSAVIWVALLSAC 693


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 233/737 (31%), Positives = 375/737 (50%), Gaps = 84/737 (11%)

Query: 199 LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV 258
           L  +V+ G +  A   FE M+  D   WN +I GY   G   EA   + +M  E I+   
Sbjct: 65  LCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDN 124

Query: 259 VTFNILIRSYNQL-----GQ-----------------CDVAMEMVKRMESLGITPDVF-- 294
            TF  +I++  +L     GQ                 C+  ++M  ++  + +   VF  
Sbjct: 125 FTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDE 184

Query: 295 -------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
                  +W  M+SG+  +G    +L  FKEM  +G   +   + SA+ AC+    L  G
Sbjct: 185 MPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSG 244

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
           MEIH   ++     D++V  SLI+MY KC +++ AERVF+ I  K++ +WN+MI G    
Sbjct: 245 MEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG---- 300

Query: 408 GYCGKAYELFIKMQESD-VPPNVITWNVLISGYIQNGN---------------------- 444
                       MQE D V P+VIT   L+    Q+G                       
Sbjct: 301 ------------MQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVL 348

Query: 445 EDEAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
           E   VD++ + G+        N   ++N  SWN+++A Y Q  Q   AL +F+ + +   
Sbjct: 349 ETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPL 408

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            P+ +TI SVLPA A L + ++ K+IH  +++  L S+  + N+++  YAK G++  +R 
Sbjct: 409 KPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTARE 468

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
            FDGM  KD+++WN++I  Y +HGF   ++  F +M+  G KPN  TF+S++ A S++G+
Sbjct: 469 FFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGL 528

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           +D G   F S+   Y I P IEHY  M+DL GR+G L+EA  FIE+MP+ P + IW +LL
Sbjct: 529 IDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLL 588

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
            A R H ++ LA LA   +  L+  +     L+  +YA  G+ ED  +++ L +E     
Sbjct: 589 AASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVK 648

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYS----WLQNVPENVTARSSHSGLCIEEEEK 792
           + G   +++     +F+    S ++++L+Y      L+ + E++   S      ++  +K
Sbjct: 649 TVGCSMVDINGRSESFINQDRSHAHTNLIYDVLDILLKKIGEDIYLHSLTKFRPLDVAKK 708

Query: 793 EEISG-IHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
              S   HS KLA+ F LI S+   + + + KN R+C  CH  AK +S +   EI + D+
Sbjct: 709 RGNSPEYHSVKLAICFGLI-STAIGNPVIVRKNTRICDDCHRAAKKISQVTKREIVVGDA 767

Query: 852 KCLHHFKNGQCSCGDYW 868
           K  HHF++G CSC DYW
Sbjct: 768 KVFHHFRDGCCSCRDYW 784



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 221/487 (45%), Gaps = 94/487 (19%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T+ L  + + G + +A ++FE M   + + W+ +I  Y+ +  ++E ++ ++ M  +G+ 
Sbjct: 62  TRDLCGFVESGLMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIR 121

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            D+F FP +++ACG       G+ +H  +IK+G      V N ++ +Y+K G +  A + 
Sbjct: 122 SDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKV 181

Query: 215 FESMDEKDGVAWNSMISGYFQIGEN-------DEAHRLFDK------------------- 248
           F+ M  +D V+WNSM+SGY   G+         E  RL +K                   
Sbjct: 182 FDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCL 241

Query: 249 ---------MCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                    + R E++L ++    LI  Y + G+ D A  +  R+ S     ++  W  M
Sbjct: 242 RSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYS----KNIVAWNAM 297

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I G  ++ +               V+P+ +T+ + + +C+   AL  G  IH  A++  F
Sbjct: 298 IGGMQEDDK---------------VIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMF 342

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
              +++  +L++MY KC EL+ AE VF+ + +K++ SWN+M+A Y Q     +A ++F  
Sbjct: 343 LPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQH 402

Query: 420 MQESDVPPNVITW-----------------------------------NVLISGYIQNGN 444
           +    + P+ IT                                    N ++  Y + G+
Sbjct: 403 ILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGD 462

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
              A + F  M     V ++  SWN++I  Y   G    ++  F +M+   F PN  T +
Sbjct: 463 LQTAREFFDGM-----VCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFV 517

Query: 505 SVLPACA 511
           S+L AC+
Sbjct: 518 SLLTACS 524



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 212/442 (47%), Gaps = 25/442 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG   EAI     +  +G +    T+  +++AC +  ++ + +K+H   + +  ++DV+V
Sbjct: 102 NGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLDVYV 161

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y K G ++ A +VF++M  R+L +W++M+  Y  D      +  F  M++ G 
Sbjct: 162 CNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGN 221

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             D F     L AC       +G  +H  VI+  +     V+ S++ +Y KCGK+ +A R
Sbjct: 222 KADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAER 281

Query: 214 FFESMDEKDGVAWNSMISGY--------------------FQIGENDEAHRLFDKMCREE 253
            F  +  K+ VAWN+MI G                      Q G   E   +     R+ 
Sbjct: 282 VFNRIYSKNIVAWNAMIGGMQEDDKVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKM 341

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
               +V    L+  Y + G+  +A  +  +M       ++ +W  M++ + QN +  +AL
Sbjct: 342 FLPYLVLETALVDMYGKCGELKLAEHVFNQMNE----KNMVSWNTMVAAYVQNEQYKEAL 397

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
            +F+ +    + P+ +TI S + A  +L + + G +IHS  +K+G   +  + N+++ MY
Sbjct: 398 KMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMY 457

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
           +KC +L+ A   FD +  KDV SWN+MI  Y   G+   + + F +M+     PN  T+ 
Sbjct: 458 AKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFV 517

Query: 434 VLISGYIQNGNEDEAVDLFQRM 455
            L++    +G  DE    F  M
Sbjct: 518 SLLTACSISGLIDEGWGFFNSM 539



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 165/336 (49%), Gaps = 6/336 (1%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFV-KTKLLSVYAKCGCLDDAREVFEDM 117
           T INLL +C  S ++   + +H F      +   V +T L+ +Y KCG L  A  VF  M
Sbjct: 313 TMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQM 372

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            E+N+ +W+ M+ AY ++++++E +++F  ++ + L PD      +L A         GK
Sbjct: 373 NEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGK 432

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +HS ++KLG+     + N+++ +Y KCG L  AR FF+ M  KD V+WN+MI  Y   G
Sbjct: 433 QIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHG 492

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTW 296
               + + F +M  +  K    TF  L+ + +  G  D        M+   GI P +  +
Sbjct: 493 FGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHY 552

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
            CM+    +NG   +A    +EM  V       ++ +A     D+  LA     H L++K
Sbjct: 553 GCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDV-VLAELAARHILSLK 611

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
              T   ++   L NMY++    E  +R+  ++K++
Sbjct: 612 HDNTGCYVL---LSNMYAEAGRWEDVDRIKYLMKEQ 644



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 155/332 (46%), Gaps = 40/332 (12%)

Query: 417 FIKMQESDVP------PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
           FIK  +S         PN +     + G++++G    A+D+F++M  +D     T  WN 
Sbjct: 40  FIKRAQSKTSFKPLARPNDLNITRDLCGFVESGLMGNALDMFEKMNHSD-----TFIWNV 94

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +I GY   G    A+  + +M+      +  T   V+ AC  L+A    +++HG +++  
Sbjct: 95  IIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIG 154

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
            +  + V N LID Y K G I  +  +FD M  +D+++WNS++ GY + G   ++L  F 
Sbjct: 155 FDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFK 214

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPMIEHYSAMIDLYGR 649
           +M   G K +R   +S + A S+   +  G ++ C +     ++  M++  +++ID+YG+
Sbjct: 215 EMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQ--TSLIDMYGK 272

Query: 650 SGKLEEAMEFI-------------------EDMPIEPDSSIWEALLTACRIHGNI----D 686
            GK++ A                       ED  + PD      LL +C   G +     
Sbjct: 273 CGKVDYAERVFNRIYSKNIVAWNAMIGGMQEDDKVIPDVITMINLLPSCSQSGALLEGKS 332

Query: 687 LAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
           +   AI ++F      ++++  ++ +Y  CG+
Sbjct: 333 IHGFAIRKMF---LPYLVLETALVDMYGKCGE 361


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 243/819 (29%), Positives = 402/819 (49%), Gaps = 70/819 (8%)

Query: 62  NLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE- 119
           +LL+    + +    R +H+ +      + V    KL+S YA+      +  VF  +   
Sbjct: 24  SLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPT 83

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
            N+Y W+++I A + +  + + +  +  M +  L PD F FP ++ +C    D E G ++
Sbjct: 84  NNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIV 143

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H   +++G      + N+++ +Y +   L  AR  FE M  +D V+WNS+ISGY   G  
Sbjct: 144 HEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFW 203

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF----- 294
           ++A  ++ K     +     T + ++ +   L      + +   +E +GI  DV      
Sbjct: 204 EDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGL 263

Query: 295 --------------------------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
                                     TW  MI G+AQ GR   ++ LF +M   G +P+ 
Sbjct: 264 LSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-IDGFVPDM 322

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
           ++ITS I AC     L +G  +H   +  GF  D +  N LI+MY+KC +L AA+ VFD 
Sbjct: 323 LSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDT 382

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY--------- 439
            K KD  +WNS+I GY Q+GY  +  E F KM + +  P+ +T+ +L+S +         
Sbjct: 383 TKCKDSVTWNSLINGYTQSGYYKEGLESF-KMMKMERKPDSVTFVLLLSIFSQLADINQG 441

Query: 440 -------IQNGNEDEAV------DLFQRMGKNDKVKR--------NTASWNSLIAGYQQL 478
                  I+ G E E +      D++ + G+ D + +        +  SWN++IA     
Sbjct: 442 RGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHF 501

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
                   +  +M++    P+  T+L +LP C+ L    + KEIHG + +   ES++P+ 
Sbjct: 502 DDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIG 561

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           N+LI+ Y+K G++     +F  M  KD++TW +LI  + ++G    AL  F  M+  G+ 
Sbjct: 562 NALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKAFQDMELSGVL 621

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           P+   F++ I A S +GMV  G + F  +   Y + P +EHY+ ++DL  RSG L +A E
Sbjct: 622 PDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEE 681

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
           FI  MP++PD+S+W ALL+ACR  GN ++A    +++ +L   D     L+  IYA  GK
Sbjct: 682 FILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDDTGYYVLVSNIYATLGK 741

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS-ESY---SDLL-YSWLQNVP 773
            +    VR   +    +   G  WIE++  VY F TG  S E Y    DLL Y       
Sbjct: 742 WDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDKSFEQYDKVKDLLEYLVRLMAK 801

Query: 774 ENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGS 812
           E   A    +   +EE++K ++   HSE+LA+AF L+ +
Sbjct: 802 EGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNT 840



 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 155/617 (25%), Positives = 276/617 (44%), Gaps = 88/617 (14%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  NG   +A+     +  +  +    T+ +++ +C     + L   +H   + +  E D
Sbjct: 96  LTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESD 155

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +++   L+ +Y++   LD+AR VFE+M  R+  +W+++I  Y  +  W + ++++     
Sbjct: 156 LYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRM 215

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G+ PD F    +L ACG+    + G  +H ++ K+G++    + N +L++Y K  +L  
Sbjct: 216 TGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLRE 275

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-----------------CREE 253
           ARR F  M  KD V WN+MI GY Q+G ++ + +LF  M                 C + 
Sbjct: 276 ARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVPDMLSITSTIRACGQS 335

Query: 254 IKLGVVTF-----------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
             L V  F                 NILI  Y + G    A E+    +      D  TW
Sbjct: 336 GDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTK----CKDSVTW 391

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             +I+G+ Q+G   + L+ FK M  +   P+ VT    +S  + L  +  G  IH   +K
Sbjct: 392 NSLINGYTQSGYYKEGLESFKMMK-MERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIK 450

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            GF  ++++GNSL+++Y+KC E++   +VF  +   D+ SWN++IA       C   +++
Sbjct: 451 FGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQM 510

Query: 417 FIKMQESDVPP-----------------------------------NVITWNVLISGYIQ 441
             +M+   + P                                   NV   N LI  Y +
Sbjct: 511 INEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSK 570

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G+ +  + +F+ M + D V     +W +LI+ +   G+   AL  F+ M+ S   P+ V
Sbjct: 571 CGSLENCIKVFKYMKEKDVV-----TWTALISAFGMYGEGKKALKAFQDMELSGVLPDSV 625

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSL-PVMNS---LIDTYAKSGNIVYSRTI 557
             ++ + AC++   S  VKE      R   + +L P M     ++D  A+SG +  +   
Sbjct: 626 AFIAFIFACSH---SGMVKEGLRFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEF 682

Query: 558 FDGMSSK-DIITWNSLI 573
              M  K D   W +L+
Sbjct: 683 ILSMPMKPDASLWGALL 699



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 164/621 (26%), Positives = 279/621 (44%), Gaps = 91/621 (14%)

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           +FL   +L+   +  +    + +HSL+I  G+S        +++ Y +    I +   F 
Sbjct: 19  EFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFR 78

Query: 217 SMDEKDGV-AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------------- 261
           S+   + V  WNS+I      G   +A   + +M  ++++    TF              
Sbjct: 79  SISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLE 138

Query: 262 ---------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
                                N LI  Y++    D A  + + M +     D  +W  +I
Sbjct: 139 LGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSN----RDSVSWNSLI 194

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           SG+  NG    ALD++ +    G++P+  T++S + AC  L A+  G+ +H +  K+G  
Sbjct: 195 SGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIA 254

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            DV++GN L++MY K E L  A RVF  +  KD  +WN+MI GY Q G    + +LF+ M
Sbjct: 255 GDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM 314

Query: 421 QESDVPP----------------------------------NVITWNVLISGYIQNGNED 446
            +  VP                                   + +  N+LI  Y + G+  
Sbjct: 315 IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLL 374

Query: 447 EAVDLFQRMGKNDKVK-RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
            A ++F      D  K +++ +WNSLI GY Q G     L  F+ M+     P+ VT + 
Sbjct: 375 AAQEVF------DTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKME-RKPDSVTFVL 427

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           +L   + L   N+ + IH  V++   E+ L + NSL+D YAK G +     +F  MS+ D
Sbjct: 428 LLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHD 487

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
           II+WN++I   V          + ++M++ GL P+  T L I+   SL  +   GK++  
Sbjct: 488 IISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHG 547

Query: 626 SITEC--YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
            I +      +P+    +A+I++Y + G LE  ++  + M  E D   W AL++A  ++G
Sbjct: 548 YIFKSGFESNVPI---GNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMYG 603

Query: 684 NIDLAVLAIERLFDLEPGDVL 704
               A+ A +   D+E   VL
Sbjct: 604 EGKKALKAFQ---DMELSGVL 621


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 228/758 (30%), Positives = 375/758 (49%), Gaps = 67/758 (8%)

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           K  H+ +I   +S  + V   ++  Y     L  AR  F+   +  G+  N+M+ GY Q 
Sbjct: 49  KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQS 108

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI------- 289
           G   E   LF  M    +++   +    +++       ++ ME++      G+       
Sbjct: 109 GRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVG 168

Query: 290 ------------------------TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
                                     DV  W  +I G+ Q G    A  LF EM   G+ 
Sbjct: 169 SSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIK 228

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P+ +T+TS I AC  +  L +G  +H   + +G  +D+LV  S ++MYSK  ++E+A  V
Sbjct: 229 PSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWV 288

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN- 444
           F  +  +++ SWN+MI+G  + G  G++++LF ++  S    ++ T   L+ G  Q  + 
Sbjct: 289 FYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASL 348

Query: 445 --------------------EDEAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQ 476
                                   VDL+ + G         N    RN  +W +++ G  
Sbjct: 349 ATGKILHGCAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLA 408

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           Q G   +AL +F +MQ      N VT +S++ +CA+L +  + + IHG + R      + 
Sbjct: 409 QNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIV 468

Query: 537 VMNSLIDTYAKSGNIVYSRTIFD-GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            M +L+D YAK G I  +  IF  G  SKD++ WNS+I GY +HG  + A+ ++ +M   
Sbjct: 469 NMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEE 528

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           GLKPN+ TFLS++ A S + +V+ G  +F S+   + I P+ +HY+ ++DL  R+G+ EE
Sbjct: 529 GLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEE 588

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A   IE MP +P +++ EALL+ CR H NI+L +   ++L  L+  +  I  ++  IYA 
Sbjct: 589 AQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYIMLSNIYAE 648

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN 775
             + +    +R L R    + + G   +E  N V+TF  G  S    + +Y +L+++   
Sbjct: 649 ARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNSHPNWEEIYHFLESLRSA 708

Query: 776 V-TARSSHSGLC----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
           V T+       C    ++EE K  +   HSE+LA+AF L+ ++ A   IRI KN+R+C  
Sbjct: 709 VETSGYVPDTSCVLRDVDEEMKVRMLWGHSERLAIAFGLL-TTPAGSLIRITKNLRVCGD 767

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   KY+S +   EI + D+   HHF NG+CSCGDYW
Sbjct: 768 CHTVTKYISKIVKREIIVRDANRFHHFSNGECSCGDYW 805



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 142/485 (29%), Positives = 227/485 (46%), Gaps = 63/485 (12%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D FV TKL+  Y+    L+ AR VF+   +      +AM+  Y +  R+RE +ELF LM 
Sbjct: 63  DQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMR 122

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
              L  D       L+AC +  D+E G  + S  ++ GM   R V +S+++  VK GK+ 
Sbjct: 123 SRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIG 182

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A+R F+ M  KD V WNS+I GY Q G  D A +LF +M    IK   +T   LI++  
Sbjct: 183 EAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACG 242

Query: 270 QLGQCDVAMEMVKRMESLGITPDVF-------------------------------TWTC 298
            +G   +   M   +  LG+  D+                                +W  
Sbjct: 243 GIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNA 302

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           MISG  +NG   ++ DLF  +       +  TI S +  C+   +LA G  +H  A++  
Sbjct: 303 MISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIR-S 361

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
           F  ++++  +++++YSKC  L+ A  VF+ +KD++V +W +M+ G  Q G+   A  LF 
Sbjct: 362 FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFA 421

Query: 419 KMQESDVPPNVITWNVLIS-----GYIQNG-----------------NEDEAVDLFQRMG 456
           +MQE  +  N +T+  L+      G ++ G                 N    VD++ + G
Sbjct: 422 QMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCG 481

Query: 457 K---------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           K         +  + ++   WNS+I GY   G    A+G++ KM      PN  T LS+L
Sbjct: 482 KINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLL 541

Query: 508 PACAY 512
            AC++
Sbjct: 542 SACSH 546



 Score =  205 bits (522), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 239/518 (46%), Gaps = 46/518 (8%)

Query: 32  LCG---NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKL-HAFLNLVT 87
           LCG   +GR  E + +   + ++  +V   +    L+AC  S    +  ++  + +    
Sbjct: 102 LCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGM 161

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           E + FV + ++S   K G + +A+ VF+ M  +++  W+++IG Y +   +    +LFF 
Sbjct: 162 EKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFE 221

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M   G+ P       ++QACG  G+ + GK MH  V+ LG+     V  S + +Y K G 
Sbjct: 222 MHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGD 281

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-------------- 253
           +  AR  F  M  ++ V+WN+MISG  + G   E+  LF ++ R                
Sbjct: 282 IESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQG 341

Query: 254 ------IKLGVVTFNILIRS--------------YNQLGQCDVAMEMVKRMESLGITPDV 293
                 +  G +     IRS              Y++ G    A  +  RM+      +V
Sbjct: 342 CSQTASLATGKILHGCAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKD----RNV 397

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            TWT M+ G AQNG    AL LF +M   G+  N VT  S + +C  L +L  G  IH  
Sbjct: 398 ITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGH 457

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAGYCQAGYCGK 412
             ++GF  D++   +L++MY+KC ++  AER+F      KDV  WNSMI GY   G+  +
Sbjct: 458 LFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQ 517

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
           A  ++ KM E  + PN  T+  L+S    +   ++ + LF  M ++  ++     +  L+
Sbjct: 518 AVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLV 577

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               + G+   A  +  KM    F P    + ++L  C
Sbjct: 578 DLLSRAGRFEEAQALIEKMP---FQPGTAVLEALLSGC 612



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 153/317 (48%), Gaps = 5/317 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           NG + E+  +   +          T ++LLQ C  + S+   + LH       E ++ + 
Sbjct: 310 NGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSFESNLILS 369

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T ++ +Y+KCG L  A  VF  M++RN+ TW+AM+   +++    + + LF  M ++G+ 
Sbjct: 370 TAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIA 429

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            +   F  ++ +C + G  + G+ +H  + +LG +       +++ +Y KCGK+  A R 
Sbjct: 430 ANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERI 489

Query: 215 FESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
           F      KD V WNSMI+GY   G   +A  ++ KM  E +K    TF  L+ + +    
Sbjct: 490 FSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRL 549

Query: 274 CDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            +  + +   ME    I P    + C++   ++ GR  +A  L ++M F    P    + 
Sbjct: 550 VEQGISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPF---QPGTAVLE 606

Query: 333 SAISACTDLKALAMGME 349
           + +S C   K + +G++
Sbjct: 607 ALLSGCRTHKNINLGIQ 623



 Score = 47.8 bits (112), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 10/174 (5%)

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           VK  H  ++  SL +   V   L+  Y+   ++  +R +FD       +  N+++CGY+ 
Sbjct: 48  VKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQ 107

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
            G +   L+LF  M+S  L+ +  +    + A + +   ++G ++  S  E       +E
Sbjct: 108 SGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVE-----KGME 162

Query: 639 HY----SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
                 S+MI    + GK+ EA    + MP   D   W +++      G  D+A
Sbjct: 163 KNRFVGSSMISFLVKFGKIGEAQRVFDGMP-NKDVVCWNSIIGGYVQAGCFDVA 215


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 222/711 (31%), Positives = 362/711 (50%), Gaps = 81/711 (11%)

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           +L   +  G    A++ F+++ + D    +++IS +   G  +EA RL+  +    IK  
Sbjct: 72  LLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPH 131

Query: 258 VVTF-----------------------------------NILIRSYNQLGQCDVAMEMVK 282
              F                                   N LI +Y   G+C   +E  +
Sbjct: 132 NSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAY---GKCK-CVEGAR 187

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
           R+    +  DV +WT M S +   G     L +F EM + GV PN VT++S + AC++LK
Sbjct: 188 RVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELK 247

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
            L  G  IH  AV+ G  ++V V ++L+++Y++C  ++ A  VFD++  +DV        
Sbjct: 248 DLKSGRAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDV-------- 299

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                      ++WN +++ Y  N   D+ + LF +M  +  V+
Sbjct: 300 ---------------------------VSWNGVLTAYFTNREYDKGLALFSQM-SSKGVE 331

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
            + A+WN++I G  + GQ   A+ + RKMQ+  F PN +TI S LPAC+ L +    KE+
Sbjct: 332 ADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEV 391

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           H  V R  L   L  M +L+  YAK G++  SR +FD +  KD++ WN++I    +HG  
Sbjct: 392 HCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNG 451

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
              L LF+ M   G+KPN  TF  ++   S + +V+ G ++F S+   + + P   HY+ 
Sbjct: 452 REVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYAC 511

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           M+D++ R+G+L EA EFI+ MP+EP +S W ALL ACR++ N++LA ++  +LF++EP +
Sbjct: 512 MVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKLFEIEPNN 571

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYS 762
                 +  I        +A + R L +E     + G  W++V + V+TFV G  +   S
Sbjct: 572 PGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFVVGDKNNMES 631

Query: 763 DLLYSWLQNVPENVTAR-----SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
           D +Y++L  + E + +      + +    I++EEK E    HSEKLA+AF ++ +     
Sbjct: 632 DKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEKLAVAFGIL-NLNGQS 690

Query: 818 TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +IR+ KN+R+C  CH   KYVS +    I + DS   HHF+NG CSC D W
Sbjct: 691 SIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCSCQDLW 741



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 245/512 (47%), Gaps = 46/512 (8%)

Query: 19  KSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARK 78
           + +P    T +      G  NEAI +  S+  +G K   + ++ + +AC  S      ++
Sbjct: 94  QPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKE 153

Query: 79  LHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 137
           +H   +      D F+   L+  Y KC C++ AR VF+D+  +++ +W++M   Y     
Sbjct: 154 VHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGL 213

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
            R  + +F  M  +G+ P+      IL AC    D ++G+ +H   ++ GM     V ++
Sbjct: 214 PRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIENVFVCSA 273

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           ++++Y +C  +  AR  F+ M  +D V+WN +++ YF   E D+   LF +M  + ++  
Sbjct: 274 LVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGVEAD 333

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
             T+N +I    + GQ + A+EM+++M++LG                           FK
Sbjct: 334 EATWNAVIGGCMENGQTEKAVEMLRKMQNLG---------------------------FK 366

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
                   PN +TI+S + AC+ L++L MG E+H    +     D+    +L+ MY+KC 
Sbjct: 367 --------PNQITISSFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCG 418

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           +L  +  VFDMI  KDV +WN+MI      G   +   LF  M +S + PN +T+  ++S
Sbjct: 419 DLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLS 478

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
           G   +   +E + +F  MG++  V+ +   +  ++  + + G+ + A    ++M      
Sbjct: 479 GCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMP---ME 535

Query: 498 PNCVTILSVLPACAYL-------VASNKVKEI 522
           P      ++L AC          +++NK+ EI
Sbjct: 536 PTASAWGALLGACRVYKNVELAKISANKLFEI 567


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 258/903 (28%), Positives = 436/903 (48%), Gaps = 102/903 (11%)

Query: 52   GAKVRRNTYI--NLLQACIDSNSIHLAR---KLHAFLNLVTEI--DVFVKTKLLSVYAKC 104
            G  V  N ++  +L+ AC  S S ++A    ++H F+ + T I  DV+V T L+  Y   
Sbjct: 838  GLGVEPNGFMVASLITAC--SRSGYMADEGFQVHGFV-VKTGILGDVYVGTALVHFYGSI 894

Query: 105  GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKIL 164
            G + +A+++FE+M + N+ +W++++  YS      EV+ ++  M Q+G+  +   F  + 
Sbjct: 895  GLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVT 954

Query: 165  QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
             +CG   D   G  +   +I+ G      V NS+++++     +  A   F+ M+E D +
Sbjct: 955  SSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDII 1014

Query: 225  AWNSMISGYFQIGENDEAHRLFDKMCREE------------------------------- 253
            +WN+MIS Y   G   E+ R F  M                                   
Sbjct: 1015 SWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLV 1074

Query: 254  IKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT 309
            +KLG    V   N L+  Y++ G+ + A  + + M       D+ +W  M++ + Q+G+ 
Sbjct: 1075 VKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTE----RDLISWNSMMACYVQDGKC 1130

Query: 310  SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL 369
               L +  E+  +G + N VT  SA++AC++ + L     +H+L +  GF D ++VGN+L
Sbjct: 1131 LDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNAL 1190

Query: 370  INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
            + MY K   +  A++V   +   D  +WN++I G+ +     +A + +  ++E  +P N 
Sbjct: 1191 VTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANY 1250

Query: 430  ITW------------------------------------NVLISGYIQNGNEDEAVDLFQ 453
            IT                                     N LI+ Y + G+ + +  +F 
Sbjct: 1251 ITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFD 1310

Query: 454  RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
             +G    +     +WN+++A     G    AL +F +M++     +  +    L A A L
Sbjct: 1311 GLGNKSPI-----TWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANL 1365

Query: 514  VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
                + +++HG V++   ES L V N+ +D Y K G +     +     ++  ++WN LI
Sbjct: 1366 AVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILI 1425

Query: 574  CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
              +  HG +  A + F +M   G KP+  TF+S++ A +  G+VD G   + S+T  + +
Sbjct: 1426 SAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGV 1485

Query: 634  IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
             P IEH   +IDL GRSG+L  A  FI++MP+ P+   W +LL ACRIHGN++LA    E
Sbjct: 1486 FPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAE 1545

Query: 694  RLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFV 753
             L +L+P D     L   + A  GK ED   +RK    N  +      W+++K+ V++F 
Sbjct: 1546 HLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSF- 1604

Query: 754  TGGWSESY-------SDLLYSWLQNVPE-NVTARSSHSGLCIEEEEKEEISGIHSEKLAL 805
              G  E Y       S  L   ++   E      +S +   ++EE+KE     HSE+LAL
Sbjct: 1605 --GMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLAL 1662

Query: 806  AFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCG 865
            AF LI + ++  T+RI KN+R+C  CH   K+VS +   +I L D    HHF  G+CSCG
Sbjct: 1663 AFGLINTPESS-TLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCG 1721

Query: 866  DYW 868
            DYW
Sbjct: 1722 DYW 1724



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 162/482 (33%), Positives = 258/482 (53%), Gaps = 42/482 (8%)

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           V +WT M+SG++QNGR  +A  LF +M   GV  N  T  SA+ ACT L+ L MG+++  
Sbjct: 96  VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQG 155

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
              K  F +++ V ++L++ +SKC ++E A  +F  + ++DV SWN+MI GY   G+   
Sbjct: 156 CIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADD 215

Query: 413 AYELFIKMQESDVPPNVITWN-----------------------------------VLIS 437
           ++ +F  M    + P+  T                                     +LI+
Sbjct: 216 SFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLIN 275

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN-NALGVFRKMQSSCF 496
            Y +NG+   A DL + M     +K++  S  +LI GY   G  + +AL +F++M     
Sbjct: 276 AYAKNGSLRSAKDLRKGM-----LKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNI 330

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
             + V + S+L  CA L +     +IH   L+      + + N+LID YAKSG I  ++ 
Sbjct: 331 GMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKR 390

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
            FD M  K++I+W SLI GY  HG+ H A+ L+ +M+S G KPN  TFLS++ A S  G+
Sbjct: 391 AFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGL 450

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
              G + F ++   Y I P  EHYS M+DL+ R G LEEA   +  + I+ ++S+W A+L
Sbjct: 451 TAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAIL 510

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKL-ERENTRR 735
            A  I+G + L   A   LF+++P + +   ++  IY+  G  +DA K+RKL E  +T++
Sbjct: 511 GASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKK 570

Query: 736 NS 737
           N+
Sbjct: 571 NA 572



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 182/696 (26%), Positives = 320/696 (45%), Gaps = 80/696 (11%)

Query: 76   ARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
             + LHAF  + +  + +F    L+++Y+K G ++ AR VF++MR RN  +WS M+  Y R
Sbjct: 763  GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 822

Query: 135  DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRR 193
               + E V LF  M   G+ P+ F+   ++ AC   G   + G  +H  V+K G+     
Sbjct: 823  VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVY 882

Query: 194  VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
            V  +++  Y   G +  A++ FE M + + V+W S++ GY   G   E   ++ +M +E 
Sbjct: 883  VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG 942

Query: 254  IKLGVVTFNILIRS----------YNQLGQ---------CDVAMEMVKRMESLGITP--- 291
            +     TF  +  S          Y  LG            VA  ++    S        
Sbjct: 943  VSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEAC 1002

Query: 292  ---------DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
                     D+ +W  MIS +A +G   ++L  F  M  +    N  T++S +S C+ + 
Sbjct: 1003 YVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVD 1062

Query: 343  ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
             L  G  IH L VK+G   +V + N+L+ +YS+    E AE VF  + ++D+ SWNSM+A
Sbjct: 1063 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 1122

Query: 403  GYCQAGYCGKAYELFIKMQESDVPPNVITW------------------------------ 432
             Y Q G C    ++  ++ +     N +T+                              
Sbjct: 1123 CYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHD 1182

Query: 433  -----NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
                 N L++ Y + G   EA  + Q M + D+V     +WN+LI G+ +  + N A+  
Sbjct: 1183 FLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRV-----TWNALIGGHAENEEPNEAVKA 1237

Query: 488  FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE---IHGCVLRRSLESSLPVMNSLIDT 544
            ++ ++      N +T++SVL AC+     + +K    IH  ++    ES   V NSLI  
Sbjct: 1238 YKLIREKGIPANYITMVSVLGACS--APDDLLKHGMPIHAHIVLTGFESDDYVKNSLITM 1295

Query: 545  YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
            YAK G++  S  IFDG+ +K  ITWN+++     HG    AL +F +M++ G+  ++ +F
Sbjct: 1296 YAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSF 1355

Query: 605  LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
               + A +   +++ G+++   + +       +   +A +D+YG+ G++ + ++ +   P
Sbjct: 1356 SGGLAATANLAVLEEGQQLHGLVIK-LGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-P 1413

Query: 665  IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
            I      W  L++A   HG    A      +  L P
Sbjct: 1414 INRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 1449



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 145/486 (29%), Positives = 247/486 (50%), Gaps = 48/486 (9%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTE---I 89
           C  GRL EA+ +L S  T   ++  + Y+ +LQ CID  +      +H   +L+T     
Sbjct: 9   CNLGRLAEALKLLSSNPT---RLDPSLYLKILQLCIDKKAKKQGHLIHT--HLITNGFGS 63

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D+ + TKL+  Y K G +  AR VF+ M ER++ +W+AM+  YS++ R+ +   LF  M 
Sbjct: 64  DLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMR 123

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             G+  + F +   L+AC +    + G  +   + K        V+++++  + KCGK+ 
Sbjct: 124 HCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKME 183

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI--------------- 254
            A   F +M E+D V+WN+MI GY   G  D++  +F  M R  +               
Sbjct: 184 DASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASA 243

Query: 255 ----------------KLGVVTFNI----LIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                           +LG  +++I    LI +Y + G    A ++ K M    +  D+F
Sbjct: 244 EGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGM----LKKDLF 299

Query: 295 TWTCMISGFAQNGRTS-QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
           + T +I+G+A  G  S  ALDLFKEM+ + +  + V + S ++ C +L + A+G +IH+ 
Sbjct: 300 SSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAF 359

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
           A+K   + DV +GN+LI+MY+K  E+E A+R FD +++K+V SW S+I+GY + GY   A
Sbjct: 360 ALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMA 419

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
             L+ KM+     PN +T+  L+      G   E  + F  M     +K     ++ ++ 
Sbjct: 420 VSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVD 479

Query: 474 GYQQLG 479
            + + G
Sbjct: 480 LFARQG 485



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 6/307 (1%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSI-HLARKLHAFLNLVT-EIDVF 92
            N   NEA+     I  +G      T +++L AC   + +      +HA + L   E D +
Sbjct: 1228 NEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDY 1287

Query: 93   VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
            VK  L+++YAKCG L+ +  +F+ +  ++  TW+AM+ A +      E +++F  M   G
Sbjct: 1288 VKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVG 1347

Query: 153  LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            +  D F F   L A  N    E G+ +H LVIKLG      V N+ + +Y KCG++    
Sbjct: 1348 VNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVL 1407

Query: 213  RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
            +       +  ++WN +IS + + G   +A   F +M +   K   VTF  L+ + N  G
Sbjct: 1408 KMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGG 1467

Query: 273  QCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
              D  +     M    G+ P +    C+I    ++GR S A    KEM    V PN +  
Sbjct: 1468 LVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMP---VPPNDLAW 1524

Query: 332  TSAISAC 338
             S ++AC
Sbjct: 1525 RSLLAAC 1531



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 108/475 (22%), Positives = 213/475 (44%), Gaps = 42/475 (8%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFV 93
            +G+  + + +L  +   G  +   T+ + L AC +   +  ++ +HA + +    D + V
Sbjct: 1127 DGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIV 1186

Query: 94   KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
               L+++Y K G + +A++V + M + +  TW+A+IG ++ ++   E V+ + L+ + G+
Sbjct: 1187 GNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGI 1246

Query: 154  FPDDFLFPKILQACGNCGD-FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
              +      +L AC    D  + G  +H+ ++  G      V+NS++ +Y KCG L  + 
Sbjct: 1247 PANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSN 1306

Query: 213  RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------NIL 264
              F+ +  K  + WN+M++     G  +EA ++F +M    + L   +F        N+ 
Sbjct: 1307 YIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLA 1366

Query: 265  IRSYNQ--------------LGQCDVAMEM---------VKRMESLGITPDVFTWTCMIS 301
            +    Q              L   + AM+M         V +M    I     +W  +IS
Sbjct: 1367 VLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILIS 1426

Query: 302  GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH-SLAVKMGFT 360
             FA++G   +A + F EM  +G  P+ VT  S +SAC     +  G+  + S+  + G  
Sbjct: 1427 AFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVF 1486

Query: 361  DDVLVGNSLINMYSKCEELEAAER-VFDMIKDKDVYSWNSMIAG---YCQAGYCGKAYEL 416
              +     +I++  +   L  AE  + +M    +  +W S++A    +       K  E 
Sbjct: 1487 PGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEH 1546

Query: 417  FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
             +++  SD    V+  NV  +    +G  ++  +L + MG N+  K+   SW  L
Sbjct: 1547 LLELDPSDDSAYVLYSNVCAT----SGKWEDVENLRKEMGSNNIKKQPACSWVKL 1597



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 175/418 (41%), Gaps = 45/418 (10%)

Query: 339  TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN 398
            +++ +   G  +H+  +       +   N+LINMYSK   +E A  VFD ++ ++  SW+
Sbjct: 755  SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 814

Query: 399  SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI-----SGYIQN----------- 442
            +M++GY + G   +A  LF +M    V PN      LI     SGY+ +           
Sbjct: 815  TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 874

Query: 443  --------------------GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
                                G    A  LF+ M        N  SW SL+ GY   G   
Sbjct: 875  TGILGDVYVGTALVHFYGSIGLVYNAQKLFEEM-----PDHNVVSWTSLMVGYSDSGNPG 929

Query: 483  NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
              L V+++M+      N  T  +V  +C  L       ++ G +++   E S+ V NSLI
Sbjct: 930  EVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLI 989

Query: 543  DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
              ++   ++  +  +FD M+  DII+WN++I  Y  HG    +L  F  M+    + N  
Sbjct: 990  SMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNST 1049

Query: 603  TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
            T  S++   S    +  G+ +   + +   +   +   + ++ LY  +G+ E+A E +  
Sbjct: 1050 TLSSLLSVCSSVDNLKWGRGIHGLVVK-LGLDSNVCICNTLLTLYSEAGRSEDA-ELVFQ 1107

Query: 663  MPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
               E D   W +++ AC +     L  L I     L+ G V+         A C  PE
Sbjct: 1108 AMTERDLISWNSMM-ACYVQDGKCLDGLKILAEL-LQMGKVMNHVTFASALAACSNPE 1163



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 132/261 (50%), Gaps = 3/261 (1%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLL-SVYAKCGCLDDAREVFEDM 117
           T  ++L+A  +   + +A ++H  +  +      + T LL + YAK G L  A+++ + M
Sbjct: 234 TLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGM 293

Query: 118 RERNLYTWSAMIGAYSRDQRWR-EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
            +++L++ +A+I  Y+ +  +  + ++LF  M Q  +  DD +   +L  C N   F  G
Sbjct: 294 LKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALG 353

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
             +H+  +K   S    + N+++ +Y K G++  A+R F+ M+EK+ ++W S+ISGY + 
Sbjct: 354 TQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKH 413

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFT 295
           G    A  L+ KM  +  K   VTF  L+ + +  G      E    M     I P    
Sbjct: 414 GYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEH 473

Query: 296 WTCMISGFAQNGRTSQALDLF 316
           ++CM+  FA+ G   +A +L 
Sbjct: 474 YSCMVDLFARQGLLEEAYNLL 494



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 122/248 (49%), Gaps = 15/248 (6%)

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           LI  Y++ G+   A ++F  M      +R+  SW ++++GY Q G+   A  +F  M+  
Sbjct: 71  LIIFYVKVGDVIAARNVFDGM-----PERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHC 125

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
               N  T  S L AC  L   +   ++ GC+ +     +L V ++L+D ++K G +  +
Sbjct: 126 GVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDA 185

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
             +F  M  +D+++WN++I GY + GF   +  +F  M   GL P+  T  S++ A +  
Sbjct: 186 SYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEG 245

Query: 615 GMVDLGKKVFCSITE----CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSS 670
           G + +  ++   IT+     Y I+  +     +I+ Y ++G L  A +  + M ++ D  
Sbjct: 246 GGLIIANQIHGIITQLGYGSYDIVTGL-----LINAYAKNGSLRSAKDLRKGM-LKKDLF 299

Query: 671 IWEALLTA 678
              AL+T 
Sbjct: 300 SSTALITG 307



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 8/186 (4%)

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
           L +L  C    A  +   IH  ++     S L +   LI  Y K G+++ +R +FDGM  
Sbjct: 34  LKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPE 93

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           + +++W +++ GY  +G +  A  LF  M+  G+K N+ T+ S + A +    +D+G +V
Sbjct: 94  RSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQV 153

Query: 624 FCSITECYQIIPMIEHY---SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
                 C Q    +E+    SA++D + + GK+E+A      M +E D   W A++    
Sbjct: 154 ----QGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTM-MERDVVSWNAMIGGYA 208

Query: 681 IHGNID 686
           + G  D
Sbjct: 209 VQGFAD 214



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 132/279 (47%), Gaps = 14/279 (5%)

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALG-VFRKMQSSCFYPNCVTIL 504
           +  V+ F    K+D +K + A       G ++ G  +  +  VF + Q + +   C+  +
Sbjct: 695 ETPVENFAEQVKDDDLKTSNA-------GSRRWGCLDGDIAKVFLQQQHTDYGIRCLNAV 747

Query: 505 SV-LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
           +  L   + + +    K +H   +  S+   +   N+LI+ Y+K GNI ++R +FD M  
Sbjct: 748 NFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRH 807

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG-MVDLGKK 622
           ++  +W++++ GYV  G +  A+ LF QM   G++PN     S+I A S +G M D G +
Sbjct: 808 RNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQ 867

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
           V   + +   I+  +   +A++  YG  G +  A +  E+MP + +   W +L+      
Sbjct: 868 VHGFVVKT-GILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLMVGYSDS 925

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPED 721
           GN    +   +R+   + G    Q     + + CG  ED
Sbjct: 926 GNPGEVLNVYQRM--RQEGVSGNQNTFATVTSSCGLLED 962


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 236/861 (27%), Positives = 413/861 (47%), Gaps = 108/861 (12%)

Query: 3   IWILTT-FQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYI 61
           +W+LT  F   H++   K  P     +   L  N                 AK+R  T+ 
Sbjct: 8   LWLLTRLFFSYHAIPLFKKIPPIPTNNFSTLAQNQ------------TQPPAKIR--TFS 53

Query: 62  NLLQACIDSNSIHLARKLHA-------------------------FLNLVTEI------- 89
           ++ Q C   NS++  ++ HA                         +L+   ++       
Sbjct: 54  HIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLR 113

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DV     ++S YA CG +D AR+ F +M ER++ +W+++I  + ++   R+ +++F  M 
Sbjct: 114 DVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMG 173

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           + G+  D      +L+ACG   + + G  +H LV+K G  C     +++L +Y KC +L 
Sbjct: 174 RCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLD 233

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            +   F  + EK+ V+W++MI+G  Q   N E   LF +M    + +    +  L RS  
Sbjct: 234 DSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCA 293

Query: 270 QLGQCDVAMEMVKRMESLGITPDVF-------------------------------TWTC 298
            L    +  E+           D+                                ++  
Sbjct: 294 ALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNA 353

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           +I G+A++ R  QAL  F+ +   G+  + +T++ A++AC  ++    G ++H LAVK  
Sbjct: 354 IIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSI 413

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              ++ V N++++MY KC+ L  A  +FDM++ +D  SWN++IA   Q G   +    F 
Sbjct: 414 SMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFA 473

Query: 419 KMQESDVPPNVITWNVLISG----------------YIQNGNEDEA------VDLFQRMG 456
            M  S + P+  T+  ++                   I++G   ++      VD++ + G
Sbjct: 474 SMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCG 533

Query: 457 ---KNDKV-----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
              K DK+     ++   SWN++I+G+  L Q  +A   F +M      P+  T  +VL 
Sbjct: 534 MIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLD 593

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT 568
            CA L      K+IH  ++++ L+S + + ++L+D Y+K GN+  S+ +F+   ++D +T
Sbjct: 594 TCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVT 653

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT 628
           WN+++CGY  HG    AL LF+ M+   +KPN  TF+S++ A +  G+VD G   F  + 
Sbjct: 654 WNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVML 713

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
             Y + P  EHYS M+D+ GRSG+++EA+  ++ MP E D+ IW  LL+ C+IHGN+++A
Sbjct: 714 SEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVA 773

Query: 689 VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL 748
             A   L  L+P D     L+  IYA  G   +  ++RK+ R N  +   G  WIE+K+ 
Sbjct: 774 EKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDE 833

Query: 749 VYTFVTGGWSESYSDLLYSWL 769
           V+ F+ G       + +Y  L
Sbjct: 834 VHAFLVGDKGHPRDEEIYEKL 854


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 225/593 (37%), Positives = 327/593 (55%), Gaps = 31/593 (5%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEI 350
           DV+ W  MIS +  NG   +A+  F ++  V  + P+  T    + AC     L  G +I
Sbjct: 81  DVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG---TLVDGRKI 137

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H  A K+GF  +V V  SLI+MYS+      A  +FD +  +D+ SWN+MI+G  Q G  
Sbjct: 138 HCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNA 197

Query: 411 GKAYELFIKMQESDVPPNVIT----WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
            +A ++  +M+   +  N +T      V +  Y + G  D A  +F+ +   D +     
Sbjct: 198 AQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIPVKDVI----- 252

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSC--FYPNCVTILSVLPACAYLVASNKVKEIHG 524
           SWN+LI GY Q G  + A+ V+ KM   C    PN  T +S+LPA A++ A  +  +IHG
Sbjct: 253 SWNTLITGYAQNGLASEAIEVY-KMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHG 311

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
            V++ +L   + V   LID Y K G +V + ++F  +  +  +TWN++I  + +HG    
Sbjct: 312 RVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEK 371

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMI 644
            L LF +M   G+KP+  TF+S++ A S +G V+ GK  F  + E Y I P ++HY  M+
Sbjct: 372 TLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-YGIKPSLKHYGCMV 430

Query: 645 DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVL 704
           DL GR+G LE A +FI+DMP++PD+SIW ALL ACRIHGNI+L   A +RLF+++  +V 
Sbjct: 431 DLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVG 490

Query: 705 IQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDL 764
              L+  IYA  GK E   KVR L RE   + + G   IEV   V  F TG  S      
Sbjct: 491 YYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKE 550

Query: 765 LYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQA 815
           +Y  L+     +TA+    G           +EE+EKE I   HSE+LA+AF +I S+  
Sbjct: 551 IYEELR----VLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGII-STPP 605

Query: 816 PHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              IRI KN+R+C  CH   K++S +   EI + DS   HHFK+G CSCGDYW
Sbjct: 606 KSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 658



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 207/393 (52%), Gaps = 14/393 (3%)

Query: 70  SNSIHLARKLHAFLNLVTEID-VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAM 128
           S     A+ LHA L +  ++  +F+ T+L+++YA  G +  +R  F+ + ++++Y W++M
Sbjct: 29  STKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSM 88

Query: 129 IGAYSRDQRWREVVELFF-LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
           I AY  +  + E +  F+ L++   + PD + FP +L+ACG   D   G+ +H    KLG
Sbjct: 89  ISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLG 145

Query: 188 MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
                 V  S++ +Y + G    AR  F+ M  +D  +WN+MISG  Q G   +A  + D
Sbjct: 146 FQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLD 205

Query: 248 KMCREEIKLGVVT----FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
           +M  E IK+  VT      + +  Y +LG  D A ++ + +       DV +W  +I+G+
Sbjct: 206 EMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVFEIIP----VKDVISWNTLITGY 261

Query: 304 AQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           AQNG  S+A++++K M     ++PN  T  S + A   + AL  GM+IH   +K     D
Sbjct: 262 AQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLD 321

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V V   LI++Y KC  L  A  +F  +  +   +WN++I+ +   G+  K  +LF +M +
Sbjct: 322 VFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLD 381

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
             V P+ +T+  L+S    +G  +E    F+ M
Sbjct: 382 EGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM 414



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 111/469 (23%), Positives = 192/469 (40%), Gaps = 98/469 (20%)

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
            K +H+L++  G      +   ++ +Y   G +  +R  F+ + +KD  AWNSMIS Y  
Sbjct: 35  AKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVH 94

Query: 236 IGENDEAHRLFDKMCR-EEIKLGVVTFNILIRSYNQL----------------GQCDVAM 278
            G   EA   F ++    EI+    TF  ++++   L                    VA 
Sbjct: 95  NGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAA 154

Query: 279 EMVKRMESLGITP------------DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            ++      G T             D+ +W  MISG  QNG  +QALD+  EM   G+  
Sbjct: 155 SLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKM 214

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           N VT+ S +                                  ++MY+K   L++A +VF
Sbjct: 215 NFVTVVSILPV-------------------------------FVDMYAKLGLLDSAHKVF 243

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE-SDVPPNVITWNVLISGYIQNGNE 445
           ++I  KDV SWN++I GY Q G   +A E++  M+E  ++ PN  TW  ++  Y   G  
Sbjct: 244 EIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGAL 303

Query: 446 DEAVDLFQRM-------------------GKNDKV-----------KRNTASWNSLIAGY 475
            + + +  R+                   GK  ++           + ++ +WN++I+ +
Sbjct: 304 QQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCH 363

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC---VLRRSLE 532
              G     L +F +M      P+ VT +S+L AC++   S  V+E   C   +    ++
Sbjct: 364 GIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSH---SGFVEEGKWCFRLMQEYGIK 420

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
            SL     ++D   ++G +  +      M    D   W +L+    +HG
Sbjct: 421 PSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHG 469



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 166/365 (45%), Gaps = 41/365 (11%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV 91
           L  NG   +A+ VLD +  +G K+                          F+ +V+ + V
Sbjct: 191 LIQNGNAAQALDVLDEMRLEGIKMN-------------------------FVTVVSILPV 225

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ- 150
           FV      +YAK G LD A +VFE +  +++ +W+ +I  Y+++    E +E++ +M + 
Sbjct: 226 FV-----DMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEEC 280

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
             + P+   +  IL A  + G  + G  +H  VIK  +     V   ++ VY KCG+L+ 
Sbjct: 281 KEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVD 340

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A   F  + ++  V WN++IS +   G  ++  +LF +M  E +K   VTF  L+ + + 
Sbjct: 341 AMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSH 400

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G  +      + M+  GI P +  + CM+    + G    A D  K+M    + P+   
Sbjct: 401 SGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMP---LQPDASI 457

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGF-TDDVLVGNSLI--NMYSKCEELEAAERVFD 387
             + + AC     +   +E+   A    F  D   VG  ++  N+Y+   + E  ++V  
Sbjct: 458 WGALLGACR----IHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRS 513

Query: 388 MIKDK 392
           + +++
Sbjct: 514 LARER 518


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 259/916 (28%), Positives = 422/916 (46%), Gaps = 148/916 (16%)

Query: 54  KVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLS--VYAKCGCLDDAR 111
           ++ +  Y    Q      S H+ARKLHA L +++ +D  +        +Y+ CG   DA 
Sbjct: 5   QISQKFYDAFKQCSFTHKSPHIARKLHAQL-ILSGLDSSLFLLNNLLHMYSNCGLTHDAF 63

Query: 112 EVFEDMRERNLYTWSAMIGA---------------------------------YSRDQRW 138
           +VF++   RN++TW+ MI A                                 YS++   
Sbjct: 64  QVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFH 123

Query: 139 REVVELFFLMVQD----GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
               E F LM++D    G   D F F  +++ACG+ GD      +H+LV KLG      +
Sbjct: 124 SRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCI 183

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC-REE 253
           +NSV+ +YVKCG +  A   F  ++      WNSMI GY Q+    +A ++F++M  R+E
Sbjct: 184 QNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDE 243

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
                V++N LI  ++Q G     + M   M + G +P+  T+                 
Sbjct: 244 -----VSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTY----------------- 281

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
                              S +SAC     L  G  +H+  ++M  + D++ GN LI+MY
Sbjct: 282 ------------------GSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMY 323

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP------P 427
           +KC  L+ A+RVF  +++ D  SWNS+I G    G    A  LF +M+ S V       P
Sbjct: 324 AKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILP 383

Query: 428 NVI-----------------------------TWNVLISGYIQNGNEDEA---------- 448
            ++                               N +I+ Y + G+ D+A          
Sbjct: 384 TILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLR 443

Query: 449 --------VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
                   +  F R G   K +        RN  +WNS+++ Y Q G     L ++  M+
Sbjct: 444 NTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMR 503

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
           S+   P+ +T  + + ACA L       ++     +  L  ++ V NS++  Y++ G I 
Sbjct: 504 SNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIK 563

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            ++  FD +  KD+I+WN+++  +  +G     +D F+ M     KPN  +++S++   S
Sbjct: 564 EAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCS 623

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
             G+V  GK  F S+T  + I P  EH+S M+DL GR+G LE+A + IE MP +P++++W
Sbjct: 624 HMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVW 683

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
            ALL +CR+H ++ LA  A ++L +L+        L+  +Y+  G+ ++   +RKL +  
Sbjct: 684 SALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVK 743

Query: 733 TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEK 792
             R S G  WIEV N V+ F     S      +Y  L+ + + +     +  +   E   
Sbjct: 744 GIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMIEDTGKYITV---ESSV 800

Query: 793 EEISGIHSEKLALAFALIG-SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
                 HSEKLA AF L+   S  P  I ++KN+R+C  CH   K +S++   E+ + D 
Sbjct: 801 HRSKKYHSEKLAFAFGLLNLPSWMP--IHVMKNLRVCDDCHLVIKLLSLVTSRELIMRDG 858

Query: 852 KCLHHFKNGQCSCGDY 867
              HHFK+G CSC DY
Sbjct: 859 YRFHHFKDGICSCKDY 874



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 220/472 (46%), Gaps = 43/472 (9%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL 98
           + + +   +  QG      TY ++L AC  ++ +     LHA  L +   +D+     L+
Sbjct: 261 QCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLI 320

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +YAKCGCLD A+ VF+ +RE +  +W+++I          + + LF  M +  +  D+F
Sbjct: 321 DMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEF 380

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
           + P IL  C        G+L+H   IK GM     V N+++ +Y KCG    A   F  M
Sbjct: 381 ILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLM 440

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
             ++ ++W +MI+ + + G+  +A   FD M    I    VT+N ++ +Y Q G  +  +
Sbjct: 441 PLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNI----VTWNSMLSTYVQNGFSEEGL 496

Query: 279 EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
           ++   M S G+ PD   W                                +T T++I AC
Sbjct: 497 KLYVSMRSNGVQPD---W--------------------------------ITFTTSIRAC 521

Query: 339 TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN 398
            DL  + +GM++ + A K G + +V V NS++ MYS+C  ++ A+  FD I DKD+ SWN
Sbjct: 522 ADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWN 581

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           +M+A + Q G   K  + F  M +++  PN I++  ++SG    G   E    F  M + 
Sbjct: 582 AMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRV 641

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             +      ++ ++    + G    A  +   M    F PN     ++L +C
Sbjct: 642 FGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMP---FKPNATVWSALLGSC 690


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 211/613 (34%), Positives = 326/613 (53%), Gaps = 36/613 (5%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P+   +  MI G A       AL LFK+M    V  +  T +S + AC+ +KAL  G ++
Sbjct: 84  PESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQV 143

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H+L +K GF  +  V N+LI MY+ C ++  A  VFD + ++ + +WNSM++GY + G  
Sbjct: 144 HALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLW 203

Query: 411 GKAYELFIKMQESDVPPNVITW---------------NVLISGYI-------QNGNEDEA 448
            +  +LF K+ E  +  + +T                  LI  YI        N      
Sbjct: 204 DEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSL 263

Query: 449 VDLFQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           +D++ + G+ D          KR+  +W+++I+GY Q  +   AL +F +MQ    YPN 
Sbjct: 264 IDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNE 323

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           VT++SVL +CA L A    K +H  + ++ ++ ++ +   LID YAK G I  S  +F  
Sbjct: 324 VTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKE 383

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           MS K++ TW +LI G   +G    AL+ F  M    +KPN  TF+ ++ A S A +VD G
Sbjct: 384 MSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQG 443

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
           + +F S+   + I P IEHY  M+D+ GR+G LEEA +FI++MP  P++ +W  LL +CR
Sbjct: 444 RHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCR 503

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
            H NI++A  ++E +  LEP       L+   YA+ G+ EDA++VR L +E   +   G 
Sbjct: 504 AHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGC 563

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEI 795
             IE+  +V+ F +      +S  ++  L  + + +        +  + L  EEE KE  
Sbjct: 564 SLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVPNTDDARLEAEEESKETS 623

Query: 796 SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
              HSEKLA+A+ LI +S    TIRI KN+RMC  CH   K++S +    I + D    H
Sbjct: 624 VSHHSEKLAIAYGLIRTSPRT-TIRISKNLRMCRDCHNATKFISQVFERMIIVRDRNRFH 682

Query: 856 HFKNGQCSCGDYW 868
           HFK+G CSC DYW
Sbjct: 683 HFKDGLCSCNDYW 695



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 144/546 (26%), Positives = 235/546 (43%), Gaps = 61/546 (11%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           +D A  +F  + +     ++ MI   +  +     + LF  M +  +  D F F  +L+A
Sbjct: 71  IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C        G+ +H+L++K G      V N+++ +Y  CG++  AR  F+ M E+  VAW
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAW 190

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------------- 261
           NSM+SGY + G  DE  +LF K+    I+   VT                          
Sbjct: 191 NSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVS 250

Query: 262 ----------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQ 311
                       LI  Y + GQ D A ++   M+      DV  W+ MISG+AQ  R  +
Sbjct: 251 KGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDK----RDVVAWSAMISGYAQADRCKE 306

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           AL+LF EM    V PN VT+ S + +C  L A   G  +H    K      V +G  LI+
Sbjct: 307 ALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLID 366

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
            Y+KC  ++ +  VF  +  K+V++W ++I G    G    A E F  M E+DV PN +T
Sbjct: 367 FYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVT 426

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           +  ++S        D+   LF  M ++  ++     +  ++     LG+       ++ +
Sbjct: 427 FIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMV---DILGRAGFLEEAYQFI 483

Query: 492 QSSCFYPNCVTILSVLPAC-AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGN 550
            +  F PN V   ++L +C A+       K +          S   ++  L +TYA  G 
Sbjct: 484 DNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYIL--LSNTYALVGR 541

Query: 551 I---VYSRTIFDGMSSKDIITWNSLICGYVLHGFW------------HAALD-LFDQMKS 594
           +   +  R++      K I   + +    V+H F+            H ALD +  Q+K 
Sbjct: 542 VEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKR 601

Query: 595 FGLKPN 600
            G  PN
Sbjct: 602 LGYVPN 607



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 201/436 (46%), Gaps = 73/436 (16%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKL 97
           + A+ +   +  +  +  + T+ ++L+AC    ++    ++HA  L    + + FV+  L
Sbjct: 103 DNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTL 162

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           + +YA CG +  AR VF+ M ER++  W++M+  Y+++  W EVV+LF  +++  +  DD
Sbjct: 163 IQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDD 222

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
                +L ACG   + E G+L+   ++  G+     +  S++ +Y KCG++  AR+ F+ 
Sbjct: 223 VTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDE 282

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------C--------- 250
           MD++D VAW++MISGY Q     EA  LF +M                  C         
Sbjct: 283 MDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETG 342

Query: 251 --------REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
                   ++++KL V     LI  Y + G  D ++E+ K M       +VFTWT +I G
Sbjct: 343 KWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMS----FKNVFTWTALIQG 398

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
            A NG    AL+ F  M    V PN VT    +SAC+           H+  V       
Sbjct: 399 LANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACS-----------HACLVDQ----- 442

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
              G  L N         +  R FD+  +  +  +  M+    +AG+  +AY+    M  
Sbjct: 443 ---GRHLFN---------SMRRDFDI--EPRIEHYGCMVDILGRAGFLEEAYQFIDNMP- 487

Query: 423 SDVPPNVITWNVLISG 438
              PPN + W  L++ 
Sbjct: 488 --FPPNAVVWRTLLAS 501



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 132/258 (51%), Gaps = 10/258 (3%)

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           D A+ +F  + K +     ++++N +I G       +NAL +F+KM       +  T  S
Sbjct: 72  DYALSIFNHIDKPE-----SSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSS 126

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           VL AC+ + A  + +++H  +L+   +S+  V N+LI  YA  G I  +R +FDGM  + 
Sbjct: 127 VLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERS 186

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
           I+ WNS++ GY  +G W   + LF ++    ++ +  T +S+++A      +++G+ +  
Sbjct: 187 IVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGE 246

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
            I     +       +++ID+Y + G+++ A +  ++M  + D   W A+++    +   
Sbjct: 247 YIVS-KGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMD-KRDVVAWSAMISG---YAQA 301

Query: 686 DLAVLAIERLFDLEPGDV 703
           D    A+    +++ G+V
Sbjct: 302 DRCKEALNLFHEMQKGNV 319


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 243/800 (30%), Positives = 382/800 (47%), Gaps = 94/800 (11%)

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           GL  D   + K++Q     G    GKL H  +IK        + N++L +Y KCG+   A
Sbjct: 14  GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------- 261
           ++ F+ M +++ V+WNS+ISGY Q+G   E   LF +    +++L   TF          
Sbjct: 74  KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133

Query: 262 -------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                                    N LI  Y + G+ D A  + +  + L    D  +W
Sbjct: 134 LDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADEL----DSVSW 189

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD--LKALAMGMEIHSLA 354
             +I+G+ + G   + L L  +M   G+  N   + SA+ AC      ++  G  +H  A
Sbjct: 190 NSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCA 249

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG-----Y 409
           VK+G   DV+VG +L++ Y+K  +LE A ++F ++ D +V  +N+MIAG+ Q       +
Sbjct: 250 VKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEF 309

Query: 410 CGKAYELFIKMQESDVPPNVITW-----------------------------------NV 434
             +A  LF +MQ   + P+  T+                                   N 
Sbjct: 310 ANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNA 369

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           L+  Y  +G+ ++ +  F    K D V     SW SLI G+ Q GQ    L +F ++  S
Sbjct: 370 LVELYSLSGSIEDGLKCFHSTPKLDVV-----SWTSLIVGHVQNGQFEGGLTLFHELLFS 424

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              P+  TI  +L ACA L A    ++IH   ++  + +   + NS I  YAK G+I  +
Sbjct: 425 GRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSA 484

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
              F    + DI++W+ +I     HG    A+DLF+ MK  G+ PN  TFL +++A S  
Sbjct: 485 NMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHG 544

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G+V+ G + F  + + + I P ++H + ++DL GR+G+L EA  FI D   E D  +W +
Sbjct: 545 GLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRS 604

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           LL+ACR+H   D      ER+ +LEP       L+  IY   G    A ++R L ++   
Sbjct: 605 LLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGV 664

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA-----RSSHSGLCIEE 789
           +   G  WIEV N+V++FV G  S   S ++Y  L+ + E +           S     +
Sbjct: 665 KKEPGLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPK 724

Query: 790 EEKEEISGIHSEKLALAFALIG-SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFL 848
            +   +   HSEKLA+ F +I     AP  +R++KN+R C HCHET K  S + + EI L
Sbjct: 725 HKDNSMVSYHSEKLAVTFGIISLPRSAP--VRVMKNLRSCWHCHETMKLFSRLENREIIL 782

Query: 849 ADSKCLHHFKNGQCSCGDYW 868
            D    H F++G CSCGDYW
Sbjct: 783 RDPIRFHRFRDGSCSCGDYW 802



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 191/400 (47%), Gaps = 49/400 (12%)

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
           ++G+  + VT T  +   T   +L  G   H   +K  F   + + N+L+ MY KC E +
Sbjct: 12  YLGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETD 71

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-------- 432
            A+++FD +  ++V SWNS+I+GY Q G+  +   LF + + SD+  +  T+        
Sbjct: 72  VAKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCG 131

Query: 433 ---------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
                                      N LI  Y + G  D A  +F+   + D V    
Sbjct: 132 RTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSV---- 187

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV--KEIH 523
            SWNSLIAGY ++G  +  L +  KM       N   + S L AC    +S+    K +H
Sbjct: 188 -SWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLH 246

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV-----L 578
           GC ++  L+  + V  +L+DTYAK G++  +  IF  M   +++ +N++I G++      
Sbjct: 247 GCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMA 306

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
             F + A+ LF +M+S G+KP+  TF SI+ A S     + GK++   I + Y +     
Sbjct: 307 DEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFK-YNLQSDEF 365

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
             +A+++LY  SG +E+ ++     P + D   W +L+  
Sbjct: 366 IGNALVELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLIVG 404



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/361 (24%), Positives = 171/361 (47%), Gaps = 12/361 (3%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKL 97
           NEA+ +   + ++G K    T+ ++L+AC    +    +++HA       + D F+   L
Sbjct: 311 NEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNAL 370

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           + +Y+  G ++D  + F    + ++ +W+++I  + ++ ++   + LF  ++  G  PD+
Sbjct: 371 VELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDE 430

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
           F    +L AC N    ++G+ +H+  IK G+     ++NS + +Y KCG +  A   F+ 
Sbjct: 431 FTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKE 490

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
               D V+W+ MIS   Q G   EA  LF+ M    I    +TF  ++ + +  G  +  
Sbjct: 491 TKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEG 550

Query: 278 MEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
           +   + M+   GITP+V    C++    + GR ++A     +  F G   + V   S +S
Sbjct: 551 LRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEG---DPVMWRSLLS 607

Query: 337 ACTDLKALAMGMEIHSLAVKM---GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
           AC   KA   G  +    +++        VL    L N+Y+       A  + +++KD+ 
Sbjct: 608 ACRVHKATDTGKRVAERVIELEPEAAASYVL----LYNIYNDAGIQMPATEIRNLMKDRG 663

Query: 394 V 394
           V
Sbjct: 664 V 664



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 124/263 (47%), Gaps = 8/263 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF-- 92
           NG+    +T+   +   G K    T   +L AC +  ++    ++HA+  + T I  F  
Sbjct: 408 NGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYA-IKTGIGNFTI 466

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           ++   + +YAKCG +D A   F++ +  ++ +WS MI + ++    +E V+LF LM   G
Sbjct: 467 IQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSG 526

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS--VLAVYVKCGKLIW 210
           + P+   F  +L AC + G  E G L +  ++K        V++S  ++ +  + G+L  
Sbjct: 527 IAPNHITFLGVLVACSHGGLVEEG-LRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAE 585

Query: 211 ARRF-FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
           A  F  +S  E D V W S++S        D   R+ +++   E +    ++ +L   YN
Sbjct: 586 AESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPE-AAASYVLLYNIYN 644

Query: 270 QLGQCDVAMEMVKRMESLGITPD 292
             G    A E+   M+  G+  +
Sbjct: 645 DAGIQMPATEIRNLMKDRGVKKE 667


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  362 bits (930), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 209/617 (33%), Positives = 331/617 (53%), Gaps = 27/617 (4%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+R+Y+  G+  VA  +  R     +  +V  +  MI  +  N    +AL +F+ M    
Sbjct: 77  LMRAYSAQGETSVARYIFDR----SLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCA 132

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
             P+  T    + AC+ L  L +G+++H   VK+G   ++ +GN+L+ MY KC  L  A 
Sbjct: 133 FNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREAR 192

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL--ISGYIQ 441
           +V D +  +DV SWNSM+AGY Q+G    A E+  +M   ++  +  T   L  +  Y  
Sbjct: 193 KVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTS 252

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
             N     ++F+RM      K+N  SWN +IA Y      N A+ +F +M+     P+ V
Sbjct: 253 LENVQYIHNMFERM-----TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAV 307

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           TI S+LPAC  L A    + +H  + + +L+ +L + N+L+D YAK G +  +R +FD M
Sbjct: 308 TIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKM 367

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
             +D+++W S++  Y   G  + A+ LF +M   G  P+   F+S++ A S  G++D G+
Sbjct: 368 RLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR 427

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
             F  +TE Y I+P IEH++ M+DL+GR+G++EEA  FI+ MP+EP+  +W ALL+ACR+
Sbjct: 428 HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 487

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H  +D+ ++A + LF L P       L+  IYA  G  +D + VR   ++   +   G  
Sbjct: 488 HSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 547

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQ----------NVPENVTARSSHSGLCIEEEE 791
            +E+   V+TF+ G      +  +Y  L            +P+  +A        +E E+
Sbjct: 548 NVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHD-----VEVED 602

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           KE    IHSEKLA+ FA++ + Q    IRI KN+R+C  CH   K +S +    I + D 
Sbjct: 603 KECHLAIHSEKLAIVFAILNTKQGT-PIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDC 661

Query: 852 KCLHHFKNGQCSCGDYW 868
              HHF NG CSCGDYW
Sbjct: 662 NRFHHFSNGICSCGDYW 678



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 220/442 (49%), Gaps = 11/442 (2%)

Query: 73  IHLARKLHA--FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIG 130
           I    KLH+   +N    ID  +  KL+  Y+  G    AR +F+   E+N+  ++ MI 
Sbjct: 51  IKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIR 110

Query: 131 AYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSC 190
           +Y  +  + E + +F +M+     PD + FP +L+AC    +   G  +H  ++K+G+  
Sbjct: 111 SYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDT 170

Query: 191 VRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC 250
              + N+++A+Y KCG L  AR+  + M  +D V+WNSM++GY Q G+ D+A  +  +M 
Sbjct: 171 NLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMD 230

Query: 251 REEIKLGVVTFNIL--IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR 308
              +     T   L  +  Y  L        M +RM       ++ +W  MI+ +  N  
Sbjct: 231 SLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTK----KNLISWNVMIAIYVNNSM 286

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
            ++A+ LF +M   G+ P+ VTI S + AC DL AL +G  +H    K     ++L+ N+
Sbjct: 287 PNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENA 346

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           L++MY+KC  LE A  VFD ++ +DV SW SM++ Y ++G    A  LF KM +S   P+
Sbjct: 347 LLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPD 406

Query: 429 VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
            I +  ++S     G  D+    F+ M +   +      +  ++  + + G+   A    
Sbjct: 407 SIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFI 466

Query: 489 RKMQSSCFYPNCVTILSVLPAC 510
           ++M      PN     ++L AC
Sbjct: 467 KQMPME---PNERVWGALLSAC 485



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 123/235 (52%), Gaps = 11/235 (4%)

Query: 6   LTTFQQLHSLLTK--KSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINL 63
           L   Q +H++  +  K N    +  +     N   NEA+++   +   G K    T  +L
Sbjct: 253 LENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASL 312

Query: 64  LQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           L AC D +++ L R+LH ++   NL  + ++ ++  LL +YAKCGCL++AR+VF+ MR R
Sbjct: 313 LPACGDLSALFLGRRLHKYIEKGNL--QPNLLLENALLDMYAKCGCLEEARDVFDKMRLR 370

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           ++ +W++M+ AY R  +  + V LF  M+  G  PD   F  +L AC + G  + G+   
Sbjct: 371 DVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYF 430

Query: 181 SLVIKLGMSCVRRVRN--SVLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISG 232
            ++ +     V R+ +   ++ ++ + G++  A  F + M  E +   W +++S 
Sbjct: 431 RMMTE-QYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  362 bits (930), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 231/791 (29%), Positives = 383/791 (48%), Gaps = 88/791 (11%)

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD   F  +LQ C +  + + G+ +H  V   G      V   ++ +Y +CG +  A++ 
Sbjct: 3   PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------- 261
           FE ++ KD  AW  MI  Y Q G+ D A  +F +M  E++    VT+             
Sbjct: 63  FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 122

Query: 262 ----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                                   LI  YN+ G    A +  KR+E      DV +WT M
Sbjct: 123 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEH----RDVVSWTAM 178

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I+   Q+ + + A  L++ M   GV+PN +T+ +  +A  D   L+ G  I+SL      
Sbjct: 179 IAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVM 238

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             DV V NS +NM+     L  A R+F+ + D+DV +WN +I  Y Q    G+A  LF +
Sbjct: 239 ESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGR 298

Query: 420 MQESDVPPNVITWNVLISGY---------------IQNGNED------------------ 446
           +Q+  +  N IT+ ++++ Y               ++    D                  
Sbjct: 299 LQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEA 358

Query: 447 --EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
             +A  +F  MG  D +     +W  +   Y Q G +  AL +F++MQ     P   T++
Sbjct: 359 PGQAWKIFVDMGSKDVI-----TWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLV 413

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           +VL  CA+L A  K ++IH  ++       + V  +LI+ Y K G +  +R++F+ M+ +
Sbjct: 414 AVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKR 473

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           DI+ WNS++  Y  HG++   L LF+QM+  G K +  +F+S++ A S +G V  G + F
Sbjct: 474 DILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYF 533

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP-IEPDSSIWEALLTACRIHG 683
            ++ + + I P  E Y  ++DL GR+G+++EA++ +  +    PD  +W  LL ACR H 
Sbjct: 534 VAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHN 593

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
             D A  A E++ + +P       ++  +YA  G  +   ++RKL R    +   G+  I
Sbjct: 594 KTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSI 653

Query: 744 EVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGI 798
           E+ N V+ F+ G  S      +Y+ L  +   + A             +E+E KE++   
Sbjct: 654 EILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFY 713

Query: 799 HSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF 857
           HSE+LA+AF L+  S  P T +R++KN+R+C  CH   KY+S +   EI + D+   H+F
Sbjct: 714 HSERLAIAFGLM--STPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNF 771

Query: 858 KNGQCSCGDYW 868
           K+G+CSC DYW
Sbjct: 772 KDGRCSCKDYW 782



 Score =  226 bits (575), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 260/551 (47%), Gaps = 37/551 (6%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDV 91
           C  G  + A+ +   +  +     + TY+ +L AC  + S+    ++H   L    E DV
Sbjct: 82  CQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDV 141

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV T L+++Y KCG +  A + F+ +  R++ +W+AMI A  +  ++     L+  M  D
Sbjct: 142 FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLD 201

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+ P+      +  A G+      GK ++SLV    M    RV NS + ++   G L  A
Sbjct: 202 GVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDA 261

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           RR FE M ++D V WN +I+ Y Q     EA RLF ++ ++ IK   +TF +++  Y  L
Sbjct: 262 RRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSL 321

Query: 272 --------------------------------GQCDVAMEMVKRMESLGITPDVFTWTCM 299
                                           G+C+   +  K    +G + DV TWT M
Sbjct: 322 TSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMG-SKDVITWTVM 380

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
              +AQNG   +AL LF+EM   G  P   T+ + +  C  L AL  G +IHS  ++ GF
Sbjct: 381 CVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGF 440

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             +++V  +LINMY KC ++  A  VF+ +  +D+  WNSM+  Y Q GY  +  +LF +
Sbjct: 441 RMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQ 500

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           MQ      + +++  ++S    +G+  +    F  M ++  +      +  ++    + G
Sbjct: 501 MQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAG 560

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
           +   A+ +  K+ S C  P+ +  +++L AC     +++ K     VL R    S   + 
Sbjct: 561 RIQEAVDIVLKL-SGCL-PDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYV- 617

Query: 540 SLIDTYAKSGN 550
            L + YA +G+
Sbjct: 618 VLSNVYAAAGD 628



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/584 (23%), Positives = 261/584 (44%), Gaps = 75/584 (12%)

Query: 60  YINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           ++ LLQ C  + ++   R++H  + +   E +  V   L+ +YA+CG + +A++VFE + 
Sbjct: 8   FVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 67

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
            ++++ W+ MIG Y +   +   + +F+ M ++ + P    +  IL AC +    + G  
Sbjct: 68  RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGME 127

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H  +++ G      V  +++ +Y KCG +  A   F+ ++ +D V+W +MI+   Q  +
Sbjct: 128 IHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQ 187

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSY-----------------NQLGQCDV----- 276
              A  L+ +M  + +    +T   +  +Y                 +++ + DV     
Sbjct: 188 FALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESDVRVMNS 247

Query: 277 AMEMVKRMESLG---------ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           AM M      LG         +  DV TW  +I+ + QN    +A+ LF  +   G+  N
Sbjct: 248 AMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKAN 307

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            +T    ++  T L +LA G  IH L  + G+  DV+V  +L+++Y +CE    A ++F 
Sbjct: 308 DITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFV 367

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN------------------- 428
            +  KDV +W  M   Y Q G+  +A +LF +MQ     P                    
Sbjct: 368 DMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQK 427

Query: 429 ----------------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                           ++    LI+ Y + G   EA  +F++M      KR+   WNS++
Sbjct: 428 GRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMA-----KRDILVWNSML 482

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SL 531
             Y Q G  +  L +F +MQ      + V+ +SVL A ++  +     +    +L+  S+
Sbjct: 483 GAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSI 542

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS--KDIITWNSLI 573
             +  +   ++D   ++G I  +  I   +S    D I W +L+
Sbjct: 543 TPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLL 586



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 153/312 (49%), Gaps = 4/312 (1%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT- 87
           + F   N    EA+ +   +   G K    T++ +L       S+   + +H  +     
Sbjct: 280 ITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGY 339

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + DV V T L+S+Y +C     A ++F DM  +++ TW+ M  AY+++   +E ++LF  
Sbjct: 340 DRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQE 399

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M  +G  P       +L  C +    + G+ +HS +I+ G      V  +++ +Y KCGK
Sbjct: 400 MQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGK 459

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           +  AR  FE M ++D + WNSM+  Y Q G  DE  +LF++M  +  K   V+F  ++ +
Sbjct: 460 MAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSA 519

Query: 268 YNQLGQ-CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            +  G   D     V  ++   ITP    + C++    + GR  +A+D+  ++S  G +P
Sbjct: 520 LSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLS--GCLP 577

Query: 327 NGVTITSAISAC 338
           +G+   + + AC
Sbjct: 578 DGILWMTLLGAC 589



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 94/201 (46%), Gaps = 4/201 (1%)

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
           F P+    +++L  C+     +  + +H  V  R  E +  V   LI  YA+ G++  ++
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQ 60

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            +F+ +  KD+  W  +I  Y   G +  AL +F QM+   + P + T+++I+ A +   
Sbjct: 61  QVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTE 120

Query: 616 MVDLGKKVFCSI-TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
            +  G ++   I  + ++    +   +A+I++Y + G +  A +  + +    D   W A
Sbjct: 121 SLKDGMEIHGQILQQGFEGDVFVG--TALINMYNKCGSVRGAWDSFKRLE-HRDVVSWTA 177

Query: 675 LLTACRIHGNIDLAVLAIERL 695
           ++ AC  H    LA     R+
Sbjct: 178 MIAACVQHDQFALARWLYRRM 198


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  362 bits (929), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 224/738 (30%), Positives = 369/738 (50%), Gaps = 69/738 (9%)

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +Y + G L DA+ +F  ++      W+ MI  ++   ++   +  +  M+  G+ PD + 
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           FP +++AC      + GK++H  V  +G+     V +S++ +Y + G L  A+  F+++ 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------ 261
           +KD V WN M++GY + G++  A ++F +M   EIK   VTF                  
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 262 -----------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFA 304
                            N L+  Y++  QC   ++  +++       D+ +W  +ISG+ 
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKC-QC---LQAARKLFDTSPQSDLVSWNGIISGYV 236

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           QNG   +A  LF+ M   G+ P+ +T  S +    +L +L    EIH   ++     DV 
Sbjct: 237 QNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVF 296

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
           + ++LI++Y KC ++E A+++       D     +MI+GY   G   +A E F  + +  
Sbjct: 297 LKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQER 356

Query: 425 VPPNVITWNVL---------------ISGYIQNGNEDEA-------VDLFQRMGK----- 457
           + P  +T++ +               + G I     DE        +D++ + G+     
Sbjct: 357 MKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLAC 416

Query: 458 ---NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV 514
              N   +++   WNS+I    Q G+   A+ +FR+M       +CV+I   L ACA L 
Sbjct: 417 RVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLP 476

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
           A +  KEIHG +++  L S L   +SLID YAK GN+ +SR +FD M  ++ ++WNS+I 
Sbjct: 477 ALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIIS 536

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
            Y  HG     L LF +M   G++P+  TFL II A   AG VD G + +  +TE Y I 
Sbjct: 537 AYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIP 596

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER 694
             +EHY+ + D++GR+G+L+EA E I  MP  PD+ +W  LL AC IHGN++LA +A + 
Sbjct: 597 ARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKH 656

Query: 695 LFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           LFDL+P +     L+  + A  GK    LKVR + +E   R   G  WIEV N  + FV 
Sbjct: 657 LFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVA 716

Query: 755 GGWSESYSDLLYSWLQNV 772
              S   +  +YS L ++
Sbjct: 717 ADGSHPLTAQIYSVLDSL 734



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 167/650 (25%), Positives = 292/650 (44%), Gaps = 79/650 (12%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           G+ N A+     +   G    + T+  +++AC    S+ + + +H  +NL+  + DVFV 
Sbjct: 37  GQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVG 96

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           + L+ +YA+ G L DA+ +F+++ +++   W+ M+  Y ++      +++F  M    + 
Sbjct: 97  SSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIK 156

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+   F  +L  C +    + G  +H + +  G+     V N++LA+Y KC  L  AR+ 
Sbjct: 157 PNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKL 216

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ---L 271
           F++  + D V+WN +ISGY Q G   EA  LF  M    IK   +TF   +   N+   L
Sbjct: 217 FDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSL 276

Query: 272 GQC--------------DVAM--------------EMVKRMESLGITPDVFTWTCMISGF 303
             C              DV +              EM +++     + D    T MISG+
Sbjct: 277 KHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGY 336

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
             NG+  +AL+ F+ +    + P  VT +S   A   L AL +G E+H   +K    +  
Sbjct: 337 VLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKC 396

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE- 422
            VG+++++MY+KC  L+ A RVF+ I +KD   WNSMI    Q G  G+A  LF +M   
Sbjct: 397 HVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGME 456

Query: 423 ----------------SDVPP------------------NVITWNVLISGYIQNGNEDEA 448
                           +++P                   ++   + LI  Y + GN + +
Sbjct: 457 GTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFS 516

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
             +F RM      +RN  SWNS+I+ Y   G     L +F +M  +   P+ VT L ++ 
Sbjct: 517 RRVFDRMQ-----ERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIIS 571

Query: 509 ACAYLVASNK-VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDI 566
           AC +    ++ ++  H       + + +     + D + ++G +  +    + M    D 
Sbjct: 572 ACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDA 631

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSLAG 615
             W +L+    +HG  +  L        F L P N G +  ++LA+  AG
Sbjct: 632 GVWGTLLGACHIHG--NVELAEVASKHLFDLDPLNSGYY--VLLANVQAG 677



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 178/376 (47%), Gaps = 23/376 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VF 92
           NG+  EA+     +  +  K    T+ ++  A     +++L ++LH  + + T++D    
Sbjct: 339 NGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSI-IKTKLDEKCH 397

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V + +L +YAKCG LD A  VF  + E++   W++MI + S++ R  E + LF  M  +G
Sbjct: 398 VGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEG 457

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
              D       L AC N      GK +H L+IK  +       +S++ +Y KCG L ++R
Sbjct: 458 TRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSR 517

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           R F+ M E++ V+WNS+IS Y   G+  E   LF +M R  I+   VTF  +I +    G
Sbjct: 518 RVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAG 577

Query: 273 QCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           Q D  +     M E  GI   +  + C+   F + GR  +A +    M F    P+    
Sbjct: 578 QVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFP---PDAGVW 634

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS-----LINMYSKCEELEAAERVF 386
            + + AC     +   +E+  +A K  F  D L  NS     L N+ +   +     +V 
Sbjct: 635 GTLLGACH----IHGNVELAEVASKHLFDLDPL--NSGYYVLLANVQAGAGKWRKVLKVR 688

Query: 387 DMIKDKDV-----YSW 397
            ++K++ V     YSW
Sbjct: 689 SIMKERGVRKVPGYSW 704


>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  362 bits (929), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 214/620 (34%), Positives = 329/620 (53%), Gaps = 46/620 (7%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
           TP       +I    + G   QAL L    S     P   T    I +     +L+  ++
Sbjct: 35  TPPNSNNNHLIQSLCKQGNLKQALYLLSHES----NPTQQTCELLILSAARRNSLSDALD 90

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H L V  GF  D  +   LINM+S+ + ++ A +VFD  + + +Y WN++      AG 
Sbjct: 91  VHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGR 150

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISG---------YIQNGNEDEA------------ 448
                EL+ +M    V  +  T+  L+           ++Q G E  A            
Sbjct: 151 GNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVH 210

Query: 449 -----VDLFQRMG--------KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
                +D++ R G         ++   +N  SW+++IA Y + G+   AL +FR+M  + 
Sbjct: 211 VMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNT 270

Query: 496 F--YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
               PN VT++SVL ACA   A  + K IH  +LRR L+S LPV+++LI  YA+ G +  
Sbjct: 271 HDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLES 330

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
            + IFD M  KD++ WNSLI  Y LHG+   A+ +F++M   G  P+  +F+S++ A S 
Sbjct: 331 GQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSH 390

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
            G+V+ GKK+F S+ + + I P +EHY+ M+DL GR+ +L+EA + IED+ IEP   +W 
Sbjct: 391 TGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWG 450

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
           +LL ACRIH +++LA  A +RLF LEP +     L+  IYA     ++  +V+KL     
Sbjct: 451 SLLGACRIHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRE 510

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTAR--SSHSGLC---IE 788
            +   G+ WIEV+  +Y+F +        + L++ L N+   +  R  +  + L    ++
Sbjct: 511 LQKVPGRSWIEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLD 570

Query: 789 EEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFL 848
           +EEKE I   HSEKLA+AF LI +S+   TIRI KN+R+C  CH   K++S     EI +
Sbjct: 571 QEEKERIVLGHSEKLAVAFGLINTSKG-DTIRITKNLRLCEDCHSVTKFISKFADREIMV 629

Query: 849 ADSKCLHHFKNGQCSCGDYW 868
            D    HHFK+G CSCGDYW
Sbjct: 630 RDLNRFHHFKDGVCSCGDYW 649



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 183/371 (49%), Gaps = 20/371 (5%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSI----HLARKLHA-FLNLVTEID 90
           GR N+ + +   +   G    R TY  LL+AC+ S  +       +++HA  L       
Sbjct: 149 GRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAH 208

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF---FL 147
           V V T L+ +YA+ GC+  A  VF++M  +N+ +WSAMI  Y+++ +  E +ELF    L
Sbjct: 209 VHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMML 268

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
              D + P+      +LQAC      E GKL+H+ +++ G+  +  V ++++ +Y +CGK
Sbjct: 269 NTHDSV-PNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGK 327

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           L   +  F+ M +KD V WNS+IS Y   G   +A ++F++M         ++F  ++ +
Sbjct: 328 LESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGA 387

Query: 268 YNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            +  G  +   ++ + M +  GI P V  + CM+    +  R  +A  + +++    + P
Sbjct: 388 CSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLR---IEP 444

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFT-DDVLVGNS--LINMYSKCEELEAAE 383
                 S + AC     +   +E+   A K  F  +    GN   L ++Y++ E  +  +
Sbjct: 445 GPKVWGSLLGACR----IHCHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVK 500

Query: 384 RVFDMIKDKDV 394
           RV  ++  +++
Sbjct: 501 RVKKLLDSREL 511



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/497 (22%), Positives = 217/497 (43%), Gaps = 60/497 (12%)

Query: 20  SNPRFRDTHL-DFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARK 78
           + P   + HL   LC  G L +A+ +L    +  +   + T   L+ +    NS+  A  
Sbjct: 35  TPPNSNNNHLIQSLCKQGNLKQALYLL----SHESNPTQQTCELLILSAARRNSLSDALD 90

Query: 79  LHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 137
           +H  L +   + D F+ TKL++++++   +D+AR+VF+  R+R +Y W+A+  A +   R
Sbjct: 91  VHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGR 150

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQAC--GNC--GDFEAGKLMHSLVIKLGMSCVRR 193
             +V+EL+  M   G+  D F +  +L+AC    C     + GK +H+ +++ G      
Sbjct: 151 GNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVH 210

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---- 249
           V  +++ +Y + G + +A   F+ M  K+ V+W++MI+ Y + G+  EA  LF +M    
Sbjct: 211 VMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNT 270

Query: 250 ---------------------------------CREEIKLGVVTFNILIRSYNQLGQCDV 276
                                             R  +   +   + LI  Y + G+ + 
Sbjct: 271 HDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLES 330

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
              +  RM       DV  W  +IS +  +G   +A+ +F+EM   G  P+ ++  S + 
Sbjct: 331 GQLIFDRMHK----KDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLG 386

Query: 337 ACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDV 394
           AC+    +  G ++  S+  + G    V     ++++  +   L EAA+ + D+  +   
Sbjct: 387 ACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGP 446

Query: 395 YSWNSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
             W S++     +C      +A +   K++    P N   + +L   Y +    DE   +
Sbjct: 447 KVWGSLLGACRIHCHVELAERASKRLFKLE----PTNAGNYVLLADIYAEAEMWDEVKRV 502

Query: 452 FQRMGKNDKVKRNTASW 468
            + +   +  K    SW
Sbjct: 503 KKLLDSRELQKVPGRSW 519



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 173/405 (42%), Gaps = 57/405 (14%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           LI  +++L   D A ++  +     I    + W  +    A  GR +  L+L+  M+ +G
Sbjct: 110 LINMFSELDTVDNARKVFDKTRKRTI----YVWNALFRALALAGRGNDVLELYPRMNMMG 165

Query: 324 VMPNGVTITSAISACTD----LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
           V  +  T T  + AC      +  L  G EIH+  ++ G+   V V  +L++MY++   +
Sbjct: 166 VSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCV 225

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM--QESDVPPNVITW----- 432
             A  VFD +  K+V SW++MIA Y + G   +A ELF +M     D  PN +T      
Sbjct: 226 SYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQ 285

Query: 433 ------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                         + LI+ Y + G  +    +F RM K D V 
Sbjct: 286 ACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVL 345

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY--LVASNKVK 520
                WNSLI+ Y   G    A+ +F +M    F P+ ++ +SVL AC++  LV   K K
Sbjct: 346 -----WNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGK-K 399

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
                V    ++ S+     ++D   ++  +  +  I + +        W SL+    +H
Sbjct: 400 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIH 459

Query: 580 GFWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSLAGMVDLGKKV 623
              H  L      + F L+P N G ++ +   ++ A M D  K+V
Sbjct: 460 --CHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRV 502


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  362 bits (929), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 224/648 (34%), Positives = 348/648 (53%), Gaps = 58/648 (8%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L + Y +L + D A ++   + S    PD   W  +++G       S+AL+ F  M   G
Sbjct: 155 LAKLYFKLSRGDDARKVFDTVPS----PDTILWNTLLAGLPG----SEALEAFVRMVDAG 206

Query: 324 -VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
            V P+  T+ S++ A  +   +AMG  +H   VK G  +   V   L+++YSKC ++++A
Sbjct: 207 RVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSA 266

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
           + +FD + + D+ ++N++I+GY   G    + ELF ++  S   PN  T   +I  Y   
Sbjct: 267 QFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPF 326

Query: 443 GNE-----------------DEAVD-----LFQRMGKNDKVK--------RNTASWNSLI 472
           G+E                 D  V      L+ R+   +  +        +   SWN++I
Sbjct: 327 GHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMI 386

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
           +GY Q G    A+ +F+ MQ     PN +TI S L ACA+L A +  K +H  + +  LE
Sbjct: 387 SGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLE 446

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
            ++ VM +LID YAK G+I  +R+IFD M +K++++WN++I GY LHG    AL L+  M
Sbjct: 447 LNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDM 506

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
               + P   TFLS+I A S  G+VD G+KVF  +T  Y+I P IEH + M+DL GR+GK
Sbjct: 507 LDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGK 566

Query: 653 LEEAMEFIEDMP---IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           L EA+E I + P   I P   +W ALL AC +H N DLA LA ++LF+L+  +     L+
Sbjct: 567 LNEALELISEFPQSAIGP--GVWGALLGACMVHKNSDLAKLASQKLFELDSENAGYYVLL 624

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             +Y       +A  VR+  +      + G   IE+ +  + F+ G      S+ +YS+L
Sbjct: 625 SNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLIEIGDRPHVFMAGDHLHPQSEAIYSYL 684

Query: 770 QNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIR 820
               E +TA+   +G           +EEEEKE +  +HSEKLA+AF L+ S++    IR
Sbjct: 685 ----ERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVKVHSEKLAIAFGLL-STEPGTEIR 739

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           I+KN+R+C+ CH   K++S +    I + D+   HHF++G CSCGDYW
Sbjct: 740 IIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 208/462 (45%), Gaps = 37/462 (8%)

Query: 71  NSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMI 129
           N    AR LH   +      D FV + L  +Y K    DDAR+VF+ +   +   W+ ++
Sbjct: 128 NDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLL 187

Query: 130 GAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM 188
                     E +E F  MV  G + PD       L+A         G+ +H   +K G+
Sbjct: 188 AGLPGS----EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGL 243

Query: 189 SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
           +    V   ++++Y KCG +  A+  F+ MD  D VA+N++ISGY   G  + +  LF +
Sbjct: 244 AEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKE 303

Query: 249 MCREEIKLGVVTFNILIRSYNQLG-----QCDVAMEMVKRMESLGITPDVFT-------- 295
           +     +    T   +I  Y+  G     +C  A  +  R+++  +     T        
Sbjct: 304 LTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRLND 363

Query: 296 ------------------WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
                             W  MISG+AQNG T  A+ LF+ M  + V PN +TI+S +SA
Sbjct: 364 MESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSA 423

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C  L AL++G  +H +  K     +V V  +LI+MY+KC  +  A  +FD + +K+V SW
Sbjct: 424 CAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSW 483

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
           N+MI+GY   G   +A +L+  M ++ + P   T+  +I      G  DE   +F+ M  
Sbjct: 484 NAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTN 543

Query: 458 NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
             ++         ++    + G+ N AL +  +   S   P 
Sbjct: 544 EYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPG 585



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 144/295 (48%), Gaps = 2/295 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NG +  ++ +   +   G +   +T + ++          LAR LHAF+     + D  V
Sbjct: 291 NGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALV 350

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L ++Y +   ++ AR +F+ M E+ + +W+AMI  Y+++      V LF LM +  +
Sbjct: 351 STALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNV 410

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+       L AC + G    GK +H ++ K  +     V  +++ +Y KCG +  AR 
Sbjct: 411 QPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARS 470

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ MD K+ V+WN+MISGY   G+  EA +L+  M    I     TF  +I + +  G 
Sbjct: 471 IFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGL 530

Query: 274 CDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
            D   ++ + M +   ITP +   TCM+    + G+ ++AL+L  E     + P 
Sbjct: 531 VDEGQKVFRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPG 585



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 109/472 (23%), Positives = 198/472 (41%), Gaps = 79/472 (16%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAF- 82
           +T L  L G+  L   + ++D+      +VR +  T  + L+A  +++ + + R +H + 
Sbjct: 184 NTLLAGLPGSEALEAFVRMVDA-----GRVRPDSTTLASSLRAAAEASHMAMGRCVHGYG 238

Query: 83  LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
           +         V T L+S+Y+KCG +D A+ +F+ M   +L  ++A+I  YS +      V
Sbjct: 239 VKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSV 298

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
           ELF  +   G  P+      ++      G     + +H+ V+K  +     V  ++  +Y
Sbjct: 299 ELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLY 358

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------- 249
            +   +  AR  F++M EK   +WN+MISGY Q G  + A  LF  M             
Sbjct: 359 CRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITIS 418

Query: 250 ----------------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
                                  +E+++L V     LI  Y + G    A  +  RM++ 
Sbjct: 419 STLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDN- 477

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
               +V +W  MISG+  +G+ ++AL L+K+M    ++P   T  S I AC+    +  G
Sbjct: 478 ---KNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEG 534

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
            ++  +               + N Y     +E    + D++                +A
Sbjct: 535 QKVFRV---------------MTNEYRITPGIEHCTCMVDLLG---------------RA 564

Query: 408 GYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           G   +A EL  +  +S + P V  W  L+   + + N D A    Q++ + D
Sbjct: 565 GKLNEALELISEFPQSAIGPGV--WGALLGACMVHKNSDLAKLASQKLFELD 614



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 17/177 (9%)

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
            + +HG  +     +   V ++L   Y K      +R +FD + S D I WN+L+ G  L
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAG--L 190

Query: 579 HGFWHAALDLFDQMKSFG-LKPNRGTFLSIILAHSLAGMVDLGK-----KVFCSITECYQ 632
            G    AL+ F +M   G ++P+  T  S + A + A  + +G+      V C + E   
Sbjct: 191 PG--SEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEH 248

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
           ++      + ++ LY + G ++ A +F+ D    PD   + AL++   ++G ++ +V
Sbjct: 249 VV------TGLMSLYSKCGDMDSA-QFLFDRMDNPDLVAYNALISGYSVNGMVESSV 298


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 233/783 (29%), Positives = 383/783 (48%), Gaps = 82/783 (10%)

Query: 54  KVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTKLLSVYAKCGCLDDARE 112
           + +R  + NLLQ  I  N I   + +H  + +   + D F+   L++V +K   +D+AR 
Sbjct: 24  RPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARV 83

Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF-LMVQDGLFPDDFLFPKILQACGNCG 171
           VF+ M  +NL TWS+M+  YS+     E + +F  L  + G  P++F+   +++AC   G
Sbjct: 84  VFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLG 143

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
             E G  +H  V++ G      V  S++  Y K G +  AR  F+ + EK  V W ++I+
Sbjct: 144 VVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIA 203

Query: 232 GYFQIGENDEAHRLFDKM-----------------------------------CREEIKL 256
           GY + G +  +  LF +M                                    R   ++
Sbjct: 204 GYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEM 263

Query: 257 GVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 316
            V   N+LI  Y +  +     ++  +M    +  ++ +WT MISG+ QN    +A+ LF
Sbjct: 264 DVSVVNVLIDFYTKCNRVKAGRKLFDQM----VVKNIISWTTMISGYMQNSFDWEAMKLF 319

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
            EM+ +G  P+G   TS +++C   +AL  G ++H+  +K     D  V N LI+MY+K 
Sbjct: 320 GEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKS 379

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---- 432
             L  A++VFD++ +++V S+N+MI GY       +A ELF +M+    PP+++T+    
Sbjct: 380 NLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL 439

Query: 433 -------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
                                          + LI  Y +     +A  +F+ M + D V
Sbjct: 440 GVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIV 499

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
                 WN++  GY Q  +   AL ++  +Q S   PN  T  +++ A + L +    ++
Sbjct: 500 -----VWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQ 554

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
            H  +++  L+    V N+L+D YAK G+I  +R +F+    +D++ WNS+I  +  HG 
Sbjct: 555 FHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGE 614

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
              AL +F +M   G++PN  TF++++ A S AG V+ G   F S+   + I P  EHY+
Sbjct: 615 AEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMP-GFGIKPGTEHYA 673

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            ++ L GRSGKL EA EFIE MPIEP + +W +LL+ACRI GN++L   A E     +P 
Sbjct: 674 CVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPK 733

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
           D     L+  I+A  G   D  KVR     +      G+ WIEV N V  F+    +   
Sbjct: 734 DSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARDTTHRE 793

Query: 762 SDL 764
           +D+
Sbjct: 794 ADI 796



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 142/549 (25%), Positives = 248/549 (45%), Gaps = 75/549 (13%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGA-----------------------------KVRRNT 59
           +DF   NG + EA  V D ++ + A                              V  + 
Sbjct: 171 IDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDR 230

Query: 60  YI--NLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           Y+  ++L AC     +   +++HA+ L   TE+DV V   L+  Y KC  +   R++F+ 
Sbjct: 231 YVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQ 290

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M  +N+ +W+ MI  Y ++    E ++LF  M + G  PD F    +L +CG+    E G
Sbjct: 291 MVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQG 350

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           + +H+  IK  +     V+N ++ +Y K   LI A++ F+ M E++ +++N+MI GY   
Sbjct: 351 RQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQ 410

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL----GITPD 292
            +  EA  LF +M        ++TF  L+     L     A+E+ K++  L    G++ D
Sbjct: 411 EKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASL----FALELSKQIHGLIIKFGVSLD 466

Query: 293 VFT-------------------------------WTCMISGFAQNGRTSQALDLFKEMSF 321
           +F                                W  M  G+ Q+    +AL L+  + F
Sbjct: 467 LFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQF 526

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
               PN  T  + I+A ++L +L  G + H+  VKMG      V N+L++MY+KC  +E 
Sbjct: 527 SRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEE 586

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
           A ++F+    +DV  WNSMI+ + Q G   +A  +F +M +  + PN +T+  ++S    
Sbjct: 587 ARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSH 646

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G  ++ ++ F  M     +K  T  +  +++   + G+   A     KM      P  +
Sbjct: 647 AGRVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMP---IEPAAI 702

Query: 502 TILSVLPAC 510
              S+L AC
Sbjct: 703 VWRSLLSAC 711



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 169/327 (51%), Gaps = 8/327 (2%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKT 95
           +L+EA+ +   +  +       T+++LL       ++ L++++H  +      +D+F  +
Sbjct: 412 KLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGS 471

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            L+ VY+KC  + DAR VFE+M E+++  W+AM   Y++     E ++L+  +      P
Sbjct: 472 ALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKP 531

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           ++F F  ++ A  N      G+  H+ ++K+G+     V N+++ +Y KCG +  AR+ F
Sbjct: 532 NEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMF 591

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
            S   +D V WNSMIS + Q GE +EA  +F +M +E I+   VTF  ++ + +  G+ +
Sbjct: 592 NSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVE 651

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
             +     M   GI P    + C++S   ++G+  +A +  ++M    + P  +   S +
Sbjct: 652 DGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMP---IEPAAIVWRSLL 708

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDD 362
           SAC     +A  +E+   A +M  + D
Sbjct: 709 SACR----IAGNVELGKYAAEMAISTD 731


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 233/744 (31%), Positives = 373/744 (50%), Gaps = 88/744 (11%)

Query: 169 NCGDFEAGKLMHSLVIKLGM-----SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG 223
            C + +  K +H+ +++ G+     S  R +  + L+ +     L +A++ F+ +   + 
Sbjct: 44  QCSETKQLKQIHAQMLRTGLFFDPFSASRLITAAALSPF---PSLDYAQQVFDQIPHPNL 100

Query: 224 VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG-VVTFNILIRSYNQLGQ--------- 273
             WN++I  Y       ++  +F +M  +        TF  LI++ ++L +         
Sbjct: 101 YTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHG 160

Query: 274 --------CDV-----AMEMVKRMESLGI-------TP--DVFTWTCMISGFAQNGRTSQ 311
                    DV      +    +   LG+        P  DV +W  MI+ F Q G   +
Sbjct: 161 MVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEE 220

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           AL+LF+EM    V PNG+T+   +SAC        G  +HS   +    + + + N++++
Sbjct: 221 ALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLD 280

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MY+KC  +E A+R                               LF KM E D+    ++
Sbjct: 281 MYTKCGSVEDAKR-------------------------------LFDKMPEKDI----VS 305

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           W  ++ GY + G  D A  +F  M   D      A+WN+LI+ Y+Q G+   AL +F ++
Sbjct: 306 WTTMLVGYAKIGEYDAAQGIFDAMPNQD-----IAAWNALISAYEQCGKPKEALELFHEL 360

Query: 492 Q-SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGN 550
           Q S    P+ VT++S L ACA L A +    IH  + ++ ++ +  +  SLID Y K G+
Sbjct: 361 QLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGD 420

Query: 551 IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA 610
           +  +  +F  +  KD+  W+++I G  +HG    A+ LF +M+   +KPN  TF +I+ A
Sbjct: 421 LQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCA 480

Query: 611 HSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSS 670
            S  G+V+ G+  F  +   Y ++P ++HY+ M+D+ GR+G LEEA+E IE MP+ P +S
Sbjct: 481 CSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAAS 540

Query: 671 IWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLER 730
           +W ALL AC IH N+ LA  A  +L +LEPG+     L+  IYA  GK +    +RKL R
Sbjct: 541 VWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMR 600

Query: 731 ENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGL 785
           +   +   G   IEV  +V+ F+ G  S   +  +Y+ L  +   +         SH   
Sbjct: 601 DVGLKKEPGCSSIEVDGIVHEFLVGDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQ 660

Query: 786 CIEEEE-KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
            +EEE+ KE+   +HSEKLA+AF LI + Q+   IRIVKN+R+C  CH  AK VS ++  
Sbjct: 661 LVEEEDVKEQALFLHSEKLAIAFGLISTGQS-QPIRIVKNLRVCGDCHSVAKLVSKLYDR 719

Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
           EI L D    HHF+ G CSC DYW
Sbjct: 720 EILLRDRYRFHHFREGHCSCMDYW 743



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/398 (30%), Positives = 196/398 (49%), Gaps = 39/398 (9%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  L++A  +   +   +  H   + ++   DVF+   L+  YAKCG L     VF ++
Sbjct: 138 TFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNI 197

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             R++ +W++MI A+ +     E +ELF  M    + P+      +L AC    DFE G+
Sbjct: 198 PRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGR 257

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +HS + +  +     + N++L +Y KCG +  A+R F+ M EKD V+W +M+ GY +IG
Sbjct: 258 WVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIG 317

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
           E D A  +FD M  ++I      +N LI +Y Q G+   A+E+   +             
Sbjct: 318 EYDAAQGIFDAMPNQDI----AAWNALISAYEQCGKPKEALELFHEL------------- 360

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
                  Q  +T++              P+ VT+ S +SAC  L A+ +G  IH    K 
Sbjct: 361 -------QLSKTAK--------------PDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQ 399

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           G   +  +  SLI+MY KC +L+ A  VF  ++ KDV+ W++MIAG    G+   A  LF
Sbjct: 400 GMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALF 459

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
            KMQE  V PN +T+  ++      G  +E    F +M
Sbjct: 460 SKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQM 497



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 153/339 (45%), Gaps = 39/339 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVFV 93
           G   EA+ +   + TQ  K    T + +L AC   +     R +H+++  N + E  + +
Sbjct: 216 GCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGE-SLTL 274

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWS--------------------------- 126
              +L +Y KCG ++DA+ +F+ M E+++ +W+                           
Sbjct: 275 SNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDI 334

Query: 127 ----AMIGAYSRDQRWREVVELFF-LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
               A+I AY +  + +E +ELF  L +     PD+      L AC   G  + G  +H 
Sbjct: 335 AAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHV 394

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
            + K GM     +  S++ +Y KCG L  A   F S++ KD   W++MI+G    G   +
Sbjct: 395 YIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKD 454

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMI 300
           A  LF KM  +++K   VTF  ++ + + +G  +       +ME + G+ P V  + CM+
Sbjct: 455 AIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMV 514

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
               + G   +A++L ++M      P      + + ACT
Sbjct: 515 DILGRAGLLEEAVELIEKMPMA---PAASVWGALLGACT 550


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 231/791 (29%), Positives = 383/791 (48%), Gaps = 88/791 (11%)

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD   F  +LQ C +  + + G+ +H  V   G      V   ++ +Y +CG +  A++ 
Sbjct: 2   PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------- 261
           FE ++ KD  AW  MI  Y Q G+ D A  +F +M  E++    VT+             
Sbjct: 62  FEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESL 121

Query: 262 ----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                                   LI  YN+ G    A +  KR+E      DV +WT M
Sbjct: 122 KDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEH----RDVVSWTAM 177

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I+   Q+ + + A  L++ M   GV+PN +T+ +  +A  D   L+ G  ++ L      
Sbjct: 178 IAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVM 237

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             DV V NS +NM+     L  A R+F+ + D+DV +WN +I  Y Q    G+A  LF +
Sbjct: 238 ESDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGR 297

Query: 420 MQESDVPPNVITWNVLISGYI----------------QNGNEDEAV-------------- 449
           +Q+  V  N IT+ ++++ Y                 + G + +AV              
Sbjct: 298 LQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEA 357

Query: 450 -----DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
                 +F  MG  D +     +W  +   Y Q G +  AL +F++MQ     P   T++
Sbjct: 358 PGQAWKIFVDMGSKDVI-----TWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLV 412

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           +VL  CA+L A  K ++IH  ++       + V  +LI+ Y K G +  + ++F+ M+ +
Sbjct: 413 AVLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKR 472

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           DI+ WNS++  Y  HG++   L LF+QM+  G+K +  +F+S++ A S +G V  G + F
Sbjct: 473 DILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYF 532

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP-IEPDSSIWEALLTACRIHG 683
            ++ + + I P  E Y  ++DL GR+G+++EA++ +  +    PD  +W  LL ACR H 
Sbjct: 533 VAMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHN 592

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
             D A  A E++ + +P       ++  +YA  G  +   ++RKL R    +   G+  I
Sbjct: 593 KTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSI 652

Query: 744 EVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGI 798
           E+ N V+ F+ G  S      +Y+ L  +   + A             +E+E KE++   
Sbjct: 653 EILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLFY 712

Query: 799 HSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF 857
           HSE+LA+AF LI  S  P T +R++KN+R+C  CH   KY+S +   EI + D+   H+F
Sbjct: 713 HSERLAIAFGLI--STPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNF 770

Query: 858 KNGQCSCGDYW 868
           K+G+CSC DYW
Sbjct: 771 KDGRCSCKDYW 781



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 150/551 (27%), Positives = 259/551 (47%), Gaps = 37/551 (6%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDV 91
           C  G  + A+ +   +  +     + TY+ +L AC  + S+    ++H   L    E DV
Sbjct: 81  CQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGDV 140

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV T L+++Y KCG +  A + F+ +  R++ +W+AMI A  +  ++     L+  M  D
Sbjct: 141 FVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLD 200

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+ P+      +  A G+      GK ++ LV    M    RV NS + ++   G L  A
Sbjct: 201 GVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNSAVNMFGNAGLLGDA 260

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           RR FE M ++D V WN +I+ Y Q     EA RLF ++ ++ +K   +TF +++  Y  L
Sbjct: 261 RRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNVYTSL 320

Query: 272 --------------------------------GQCDVAMEMVKRMESLGITPDVFTWTCM 299
                                           G+C+   +  K    +G + DV TWT M
Sbjct: 321 TSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMG-SKDVITWTVM 379

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
              +AQNG   +AL LF+EM   G  P   T+ + +  C  L AL  G +IHS  ++  F
Sbjct: 380 CVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRF 439

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             +++V  +LINMY KC ++  A  VF+ +  +D+  WNSM+  Y Q GY  +  +LF +
Sbjct: 440 RMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQ 499

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           MQ   V  + +++  ++S    +G+  +    F  M ++  +      +  ++    + G
Sbjct: 500 MQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVVDLLGRAG 559

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
           +   A+ +  K+ S C  P+ +  +++L AC     +++ K     VL R    S   + 
Sbjct: 560 RIQEAVDIVLKL-SGCL-PDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHSGAYV- 616

Query: 540 SLIDTYAKSGN 550
            L + YA +G+
Sbjct: 617 VLSNVYAAAGD 627



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 139/584 (23%), Positives = 260/584 (44%), Gaps = 75/584 (12%)

Query: 60  YINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           ++ LLQ C  + ++   R++H  + +   E +  V   L+ +YA+CG + +A++VFE + 
Sbjct: 7   FVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 66

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
            ++++ W+ MIG Y +   +   + +F+ M ++ + P    +  IL AC +    + G  
Sbjct: 67  RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGME 126

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H  +++ G      V  +++ +Y KCG +  A   F+ ++ +D V+W +MI+   Q  +
Sbjct: 127 IHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQ 186

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSY---NQLGQCDVAMEMVKR--MES------- 286
              A  L+ +M  + +    +T   +  +Y   N L +      +V    MES       
Sbjct: 187 FALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESDVRVMNS 246

Query: 287 ----------LG---------ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
                     LG         +  DV TW  +I+ + QN    +A+ LF  +   GV  N
Sbjct: 247 AVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKAN 306

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            +T    ++  T L +LA G  IH L  + G+  D +V  +L+++Y +CE    A ++F 
Sbjct: 307 DITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFV 366

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN------------------- 428
            +  KDV +W  M   Y Q G+  +A +LF +MQ     P                    
Sbjct: 367 DMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQK 426

Query: 429 ----------------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                           ++    LI+ Y + G   EA+ +F++M      KR+   WNS++
Sbjct: 427 GRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMA-----KRDILVWNSML 481

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SL 531
             Y Q G  +  L +F +MQ      + V+ +SVL A ++  +     +    +L+  S+
Sbjct: 482 GAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSI 541

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS--KDIITWNSLI 573
             +  +   ++D   ++G I  +  I   +S    D I W +L+
Sbjct: 542 TPTPELYGCVVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLL 585


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 231/660 (35%), Positives = 353/660 (53%), Gaps = 61/660 (9%)

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITP---DVFTWTCMISGFAQNGRTSQALDLF 316
            FN L+  Y +LG    A  +       G TP   DV TW  M+S   Q+G   +A+   
Sbjct: 53  AFNALLSMYARLGLVADAQRLFA-----GATPGRGDVVTWNTMVSVLVQSGMFDEAVQTL 107

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS-----LIN 371
            +M  +GV P+GVT  SA+ AC+ L+ L +G E+H+  +K    DD L  NS     L++
Sbjct: 108 YDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIK----DDELAANSFVASALVD 163

Query: 372 MYSKCEELEAAERVFDMIKD--KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD--VPP 427
           MY+  E++  A +VFDM+ D  K +  WN+MI GY QAG   +A  LF +M+     VP 
Sbjct: 164 MYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPC 223

Query: 428 NVITWNVL--------------ISGYI----QNGN---EDEAVDLFQRMGKNDKVKR--- 463
                +VL              + GY+      GN   ++  +D++ R+GK D  +R   
Sbjct: 224 ETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFA 283

Query: 464 -----NTASWNSLIAGYQQLGQKNNALGVFRKMQS---SCFYPNCVTILSVLPACAYLVA 515
                +  SWN+LI G    G   +A  + R+MQ        PN +T++++LP CA L A
Sbjct: 284 MVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAA 343

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
             + KEIHG  +R +L++ + V ++L+D YAK G +  SR +FD +  ++ ITWN LI  
Sbjct: 344 PARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMA 403

Query: 576 YVLHGFWHAALDLFDQMKSFG-LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
           Y +HG    A  LFD+M + G  +PN  TF++ + A S +GMVD G ++F ++   + + 
Sbjct: 404 YGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVE 463

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI-EPDSSIWEALLTACRIHGNIDLAVLAIE 693
           P  +  + ++D+ GR+G+L+EA   +  M   E   S W  +L ACR+H N+ L  +A E
Sbjct: 464 PTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGE 523

Query: 694 RLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFV 753
           RL +LEP +     L+  IY+  G+   A +VR   R        G  WIEV   ++ F+
Sbjct: 524 RLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFM 583

Query: 754 TGGWSESYSDLLYS-----WLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFA 808
            G  +   S+ +++     W + V    T  +S     +++ +K  +   HSEKLA+AF 
Sbjct: 584 AGESAHPASEEVHAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFG 643

Query: 809 LIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           L+ ++    TIR+ KN+R+C  CHE AK++S M   EI L D +  HHF+NGQCSCGDYW
Sbjct: 644 LLRAAPGA-TIRVAKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 230/503 (45%), Gaps = 76/503 (15%)

Query: 59  TYINLLQAC----IDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAR 111
           T +++L+A       + ++ L R+ HAF     L+     F    LLS+YA+ G + DA+
Sbjct: 12  TLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQ 71

Query: 112 EVFEDMR--ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
            +F        ++ TW+ M+    +   + E V+  + MV  G+ PD   F   L AC  
Sbjct: 72  RLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSR 131

Query: 170 CGDFEAGKLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE--KDGVAW 226
               + G+ MH+ VIK   ++    V ++++ +Y    ++  AR+ F+ + +  K    W
Sbjct: 132 LELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMW 191

Query: 227 NSMISGYFQIGENDEAHRLFDKM--------------------CREE------------I 254
           N+MI GY Q G ++EA RLF +M                     R E            +
Sbjct: 192 NAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVV 251

Query: 255 KLGVV----TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTS 310
           K G+       N L+  Y +LG+ DVA    +R+ ++   PDV +W  +I+G    G  +
Sbjct: 252 KRGMAGNRFVQNALMDMYARLGKTDVA----RRIFAMVDLPDVVSWNTLITGCVVQGHVA 307

Query: 311 QALDLFKEMSFV---GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
            A  L +EM  +   GV+PN +T+ + +  C  L A A G EIH  AV+     DV VG+
Sbjct: 308 DAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGS 367

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES-DVP 426
           +L++MY+KC  L  +  VFD +  ++  +WN +I  Y   G  G+A  LF +M  S +  
Sbjct: 368 ALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEAR 427

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRM--------------------GKNDKVKRNTA 466
           PN +T+   ++    +G  D  + LF  M                    G+  ++    A
Sbjct: 428 PNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYA 487

Query: 467 SWNSLIAGYQQLGQKNNALGVFR 489
              S+ AG QQ+   +  LG  R
Sbjct: 488 MVTSMEAGEQQVSAWSTMLGACR 510



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 219/490 (44%), Gaps = 52/490 (10%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +  L  +G  +EA+  L  +   G +    T+ + L AC     + + R++HA++  
Sbjct: 88  NTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIK 147

Query: 86  VTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRE--RNLYTWSAMIGAYSRDQRWREV 141
             E+  + FV + L+ +YA    +  AR+VF+ + +  + L  W+AMI  Y++     E 
Sbjct: 148 DDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEA 207

Query: 142 VELFFLM-VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
           + LF  M  + G  P +     +L AC     F   + +H  V+K GM+  R V+N+++ 
Sbjct: 208 LRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQNALMD 267

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y + GK   ARR F  +D  D V+WN++I+G    G   +A +L  +M  ++++ G V 
Sbjct: 268 MYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREM--QQLEEGGVV 325

Query: 261 FNIL--------------------IRSY--NQLGQCDVA-----MEMVKRMESLGITPDV 293
            N +                    I  Y        DVA     ++M  +   L ++  V
Sbjct: 326 PNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALSRAV 385

Query: 294 F---------TWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKA 343
           F         TW  +I  +  +G   +A  LF  M+  G   PN VT  +A++AC+    
Sbjct: 386 FDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGM 445

Query: 344 LAMGMEI-HSLAVKMGF--TDDVLVGNSLINMYSKCEELEAAERVFDMIK--DKDVYSWN 398
           +  G+++ H++    G   T D+L    ++++  +   L+ A  +   ++  ++ V +W+
Sbjct: 446 VDRGLQLFHAMERDHGVEPTPDILA--CVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWS 503

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           +M+ G C+        E+  +      P     + +L + Y   G    A ++  RM + 
Sbjct: 504 TML-GACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRR 562

Query: 459 DKVKRNTASW 468
              K    SW
Sbjct: 563 GVAKEPGCSW 572


>gi|168041820|ref|XP_001773388.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162675264|gb|EDQ61761.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 748

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 223/709 (31%), Positives = 356/709 (50%), Gaps = 85/709 (11%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           TY+++LQ       + LA+++H   +    E   +V  KL+S+Y +CG L + REVF+ +
Sbjct: 7   TYVDILQKVFKHKDLVLAKQVHECIIKSEMEQHPYVANKLMSIYIRCGRLQNTREVFDTL 66

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            E+N++ W+ MIG Y+ +  + + +E++  M Q+G+ P++  F  IL+AC +    + G+
Sbjct: 67  VEKNVFNWTIMIGGYAENNHFEDAIEVYNKMRQNGVQPNEITFFNILKACTSPMALKWGR 126

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H  +   G     R+ N+++ +Y +CG +  AR  F  M ++D + WN MI    Q G
Sbjct: 127 KIHDHIRHAGFQSDLRLGNALIHMYARCGSMDDARLVFNGMVDRDIITWNVMIGRLVQHG 186

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES----LGITPDV 293
              EA  LF +M RE       T+  ++ +      C  A+  VK + S     G+  DV
Sbjct: 187 RGHEAFSLFLQMQREGFVPDTTTYLSMLNA----NACTGALGWVKEVHSHALRAGLESDV 242

Query: 294 -------------------------------FTWTCMISGFAQNGRTSQALDLFKEMSFV 322
                                           TW  MI G AQ+G   +A  LF++M   
Sbjct: 243 RVGTALVHMYARSGSIKDARLVFDKMTERNIITWNSMIGGLAQHGCGLEAFSLFRQMQRE 302

Query: 323 GVMPNGVTITSAIS-ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
           G++P+ +T  + ++ AC    AL    ++H  A K+G   DV VGN+L++MY+KC  ++ 
Sbjct: 303 GLVPDAITYVNILNNACASTGALQWVRKVHDDAAKVGLDFDVRVGNALVHMYAKCGSMDD 362

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------- 432
           A RVF  + D+DV SW  MI G  Q G+  +A+ LF++MQ     PN+ T+         
Sbjct: 363 ARRVFYGMVDRDVVSWTVMIGGLAQHGFGREAFSLFLQMQREGFVPNLTTYLSILNGKAS 422

Query: 433 --------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                     N LI  Y + G+ + A  +F RM   D +     
Sbjct: 423 TGALEWVKEVHTHAVNAELDSHLRVGNALIHMYAKCGSIENARLVFDRMEDRDII----- 477

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           SWN++I G  Q G    A   F +MQ   F P+  T++S+L ACA   A ++VKE+H   
Sbjct: 478 SWNAMIGGLAQNGHGREAFSHFLEMQREGFIPDAATLVSILNACASTRALDRVKEVHSHA 537

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           L   LES L V ++L+ TYAK G I  +R +F+GM+S+DIITWN +I G   HG  H A 
Sbjct: 538 LEAGLESDLRVGSALVHTYAKCGRIDDARLVFEGMASRDIITWNVMIGGLAQHGREHEAF 597

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF-CSITECYQIIPMIEHYSAMID 645
            LF QM+  G  P+  T+LSI+  +     ++  K+V   ++   +   P +   SA++ 
Sbjct: 598 SLFLQMQDVGFVPDAITYLSILGGNVSIEALEWVKEVHRHAVRAGFDTDPRVS--SALVH 655

Query: 646 LYGRSGKLEEA-MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
           +Y + G ++ A + F  +M  + D + W  LL ACR HG++++AV   E
Sbjct: 656 MYTKCGDIDNAKLHFTPNMLPDLDGTAWGDLLDACRNHGDVEMAVPTAE 704



 Score =  244 bits (623), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 172/600 (28%), Positives = 271/600 (45%), Gaps = 84/600 (14%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D + +  ILQ      D    K +H  +IK  M     V N ++++Y++CG+L   R  F
Sbjct: 4   DSYTYVDILQKVFKHKDLVLAKQVHECIIKSEMEQHPYVANKLMSIYIRCGRLQNTREVF 63

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------------- 261
           +++ EK+   W  MI GY +    ++A  +++KM +  ++   +TF              
Sbjct: 64  DTLVEKNVFNWTIMIGGYAENNHFEDAIEVYNKMRQNGVQPNEITFFNILKACTSPMALK 123

Query: 262 ---------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
                                N LI  Y + G  D A  +   M    +  D+ TW  MI
Sbjct: 124 WGRKIHDHIRHAGFQSDLRLGNALIHMYARCGSMDDARLVFNGM----VDRDIITWNVMI 179

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
               Q+GR  +A  LF +M   G +P+  T  S ++A     AL    E+HS A++ G  
Sbjct: 180 GRLVQHGRGHEAFSLFLQMQREGFVPDTTTYLSMLNANACTGALGWVKEVHSHALRAGLE 239

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG-KAYELFIK 419
            DV VG +L++MY++   ++ A  VFD + ++++ +WNSMI G  Q G CG +A+ LF +
Sbjct: 240 SDVRVGTALVHMYARSGSIKDARLVFDKMTERNIITWNSMIGGLAQHG-CGLEAFSLFRQ 298

Query: 420 MQESDVPPNVITW------------------------------------NVLISGYIQNG 443
           MQ   + P+ IT+                                    N L+  Y + G
Sbjct: 299 MQREGLVPDAITYVNILNNACASTGALQWVRKVHDDAAKVGLDFDVRVGNALVHMYAKCG 358

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           + D+A  +F  M     V R+  SW  +I G  Q G    A  +F +MQ   F PN  T 
Sbjct: 359 SMDDARRVFYGM-----VDRDVVSWTVMIGGLAQHGFGREAFSLFLQMQREGFVPNLTTY 413

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
           LS+L   A   A   VKE+H   +   L+S L V N+LI  YAK G+I  +R +FD M  
Sbjct: 414 LSILNGKASTGALEWVKEVHTHAVNAELDSHLRVGNALIHMYAKCGSIENARLVFDRMED 473

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           +DII+WN++I G   +G    A   F +M+  G  P+  T +SI+ A +    +D  K+V
Sbjct: 474 RDIISWNAMIGGLAQNGHGREAFSHFLEMQREGFIPDAATLVSILNACASTRALDRVKEV 533

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
                E   +   +   SA++  Y + G++++A    E M    D   W  ++     HG
Sbjct: 534 HSHALEA-GLESDLRVGSALVHTYAKCGRIDDARLVFEGMA-SRDIITWNVMIGGLAQHG 591



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/446 (31%), Positives = 225/446 (50%), Gaps = 41/446 (9%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  +GR +EA ++   +  +G      TY+++L A   + ++   +++H+  L    E D
Sbjct: 182 LVQHGRGHEAFSLFLQMQREGFVPDTTTYLSMLNANACTGALGWVKEVHSHALRAGLESD 241

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           V V T L+ +YA+ G + DAR VF+ M ERN+ TW++MIG  ++     E   LF  M +
Sbjct: 242 VRVGTALVHMYARSGSIKDARLVFDKMTERNIITWNSMIGGLAQHGCGLEAFSLFRQMQR 301

Query: 151 DGLFPDDFLFPKIL-QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           +GL PD   +  IL  AC + G  +  + +H    K+G+    RV N+++ +Y KCG + 
Sbjct: 302 EGLVPDAITYVNILNNACASTGALQWVRKVHDDAAKVGLDFDVRVGNALVHMYAKCGSMD 361

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------- 261
            ARR F  M ++D V+W  MI G  Q G   EA  LF +M RE     + T+        
Sbjct: 362 DARRVFYGMVDRDVVSWTVMIGGLAQHGFGREAFSLFLQMQREGFVPNLTTYLSILNGKA 421

Query: 262 ---------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                                      N LI  Y + G  + A  +  RME      D+ 
Sbjct: 422 STGALEWVKEVHTHAVNAELDSHLRVGNALIHMYAKCGSIENARLVFDRMED----RDII 477

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +W  MI G AQNG   +A   F EM   G +P+  T+ S ++AC   +AL    E+HS A
Sbjct: 478 SWNAMIGGLAQNGHGREAFSHFLEMQREGFIPDAATLVSILNACASTRALDRVKEVHSHA 537

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           ++ G   D+ VG++L++ Y+KC  ++ A  VF+ +  +D+ +WN MI G  Q G   +A+
Sbjct: 538 LEAGLESDLRVGSALVHTYAKCGRIDDARLVFEGMASRDIITWNVMIGGLAQHGREHEAF 597

Query: 415 ELFIKMQESDVPPNVITWNVLISGYI 440
            LF++MQ+    P+ IT+  ++ G +
Sbjct: 598 SLFLQMQDVGFVPDAITYLSILGGNV 623



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 163/358 (45%), Gaps = 61/358 (17%)

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
           + +E  IK   S++  +    N L+S YI+ G      ++F  +     V++N  +W  +
Sbjct: 26  QVHECIIK---SEMEQHPYVANKLMSIYIRCGRLQNTREVFDTL-----VEKNVFNWTIM 77

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           I GY +     +A+ V+ KM+ +   PN +T  ++L AC   +A    ++IH  +     
Sbjct: 78  IGGYAENNHFEDAIEVYNKMRQNGVQPNEITFFNILKACTSPMALKWGRKIHDHIRHAGF 137

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
           +S L + N+LI  YA+ G++  +R +F+GM  +DIITWN +I   V HG  H A  LF Q
Sbjct: 138 QSDLRLGNALIHMYARCGSMDDARLVFNGMVDRDIITWNVMIGRLVQHGRGHEAFSLFLQ 197

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           M+  G  P+  T+LS++ A++  G +   K+V         +   +   +A++ +Y RSG
Sbjct: 198 MQREGFVPDTTTYLSMLNANACTGALGWVKEVHSHALRA-GLESDVRVGTALVHMYARSG 256

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHG-------------------------NI- 685
            +++A   + D   E +   W +++     HG                         NI 
Sbjct: 257 SIKDA-RLVFDKMTERNIITWNSMIGGLAQHGCGLEAFSLFRQMQREGLVPDAITYVNIL 315

Query: 686 ------------------DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
                             D A + ++  FD+  G+ L+      +YA CG  +DA +V
Sbjct: 316 NNACASTGALQWVRKVHDDAAKVGLD--FDVRVGNALVH-----MYAKCGSMDDARRV 366



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 3/202 (1%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  NG   EA +    +  +G      T +++L AC  + ++   +++H+  L    E D
Sbjct: 486 LAQNGHGREAFSHFLEMQREGFIPDAATLVSILNACASTRALDRVKEVHSHALEAGLESD 545

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           + V + L+  YAKCG +DDAR VFE M  R++ TW+ MIG  ++  R  E   LF  M  
Sbjct: 546 LRVGSALVHTYAKCGRIDDARLVFEGMASRDIITWNVMIGGLAQHGREHEAFSLFLQMQD 605

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G  PD   +  IL    +    E  K +H   ++ G     RV ++++ +Y KCG +  
Sbjct: 606 VGFVPDAITYLSILGGNVSIEALEWVKEVHRHAVRAGFDTDPRVSSALVHMYTKCGDIDN 665

Query: 211 ARRFFES--MDEKDGVAWNSMI 230
           A+  F    + + DG AW  ++
Sbjct: 666 AKLHFTPNMLPDLDGTAWGDLL 687


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 211/665 (31%), Positives = 347/665 (52%), Gaps = 61/665 (9%)

Query: 264 LIRSYNQL-GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
           L+R+ N +   C V     + +++   TP    W C+I  +A +G    +L  F  +   
Sbjct: 11  LLRNPNTVVPTCHVKQLHAQIVKTTKATPHSLAWICIIKCYASHGLLRHSLASFNLLRSF 70

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE----- 377
           G+ P+     S + A T  K   +   +H+  +++GF  D+   N+L+NMYSK       
Sbjct: 71  GISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSP 130

Query: 378 -----------------ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
                            ++++  ++FD +  +DV SWN++IAG  Q G   +A  +  +M
Sbjct: 131 LHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEM 190

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ---RMGKNDKV---------------- 461
            + ++ P+  T + ++  + ++ N  +  ++     R G +  V                
Sbjct: 191 GKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQV 250

Query: 462 -----------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                       R+  SWNS+IAG  Q G+ +  LG FR+M      P  V+  SV+PAC
Sbjct: 251 ELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPAC 310

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG--MSSKDIIT 568
           A+L A N  K++H  ++R   + +  + +SL+D YAK GNI  +R IF+   M  +D+++
Sbjct: 311 AHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVS 370

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT 628
           W ++I G  +HG    A+ LF++M   G+KP    F++++ A S AG+VD G K F S+ 
Sbjct: 371 WTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQ 430

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
             + + P +EHY+A+ DL GR+G+LEEA +FI +M  EP  S+W  LL ACR H NI+LA
Sbjct: 431 RDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELA 490

Query: 689 VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL 748
              + ++  ++PG++    ++  IY+   +  DA K+R   R+   + +    WIEV N 
Sbjct: 491 EKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSWIEVGNK 550

Query: 749 VYTFVTGGWSESYSDLLYSWL-----QNVPENVTARSSHSGLCIEEEEKEEISGIHSEKL 803
           V+TF+ G  S  Y D +   L     Q   E     ++     ++EE K ++   HSE+L
Sbjct: 551 VHTFLAGDKSHPYYDKINEALNILLEQMEKEGYVLDTNEVLHDVDEEHKRDLLRTHSERL 610

Query: 804 ALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCS 863
           A+AF +I ++    TIR++KNIR+CV CH   K+++ +   EI + D+   HHFKNG CS
Sbjct: 611 AIAFGIISTTSGT-TIRVIKNIRVCVDCHTAIKFMAKIVGREIIVRDNSRFHHFKNGSCS 669

Query: 864 CGDYW 868
           CGDYW
Sbjct: 670 CGDYW 674



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 170/390 (43%), Gaps = 55/390 (14%)

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
            W  +I  Y+     R  +  F L+   G+ PD  LFP +L+A      F   + +H+ V
Sbjct: 43  AWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAV 102

Query: 184 IKLGMSCVRRVRNSVLAVYVK----------------------CGKLIWARRFFESMDEK 221
           I+LG        N+++ +Y K                        K+   R+ F+ M  +
Sbjct: 103 IRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVR 162

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMV 281
           D V+WN++I+G  Q G  +EA  +  +M +E ++    T + ++  + +        E+ 
Sbjct: 163 DVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIH 222

Query: 282 KRMESLGITPDVF-------------------------------TWTCMISGFAQNGRTS 310
                 G   DVF                               +W  +I+G  QNGR  
Sbjct: 223 GYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFD 282

Query: 311 QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI 370
           Q L  F+ M    V P  V+ +S I AC  L AL +G ++H+  +++GF D+  + +SL+
Sbjct: 283 QGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLL 342

Query: 371 NMYSKCEELEAAERVFDMIK--DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           +MY+KC  ++ A  +F+ I+  D+D+ SW ++I G    G+   A  LF +M    V P 
Sbjct: 343 DMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPC 402

Query: 429 VITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
            + +  +++     G  DE    F  M ++
Sbjct: 403 YVAFMAVLTACSHAGLVDEGWKYFNSMQRD 432



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/357 (21%), Positives = 169/357 (47%), Gaps = 12/357 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG   EA+ ++  +  +  +    T  ++L    +  ++   +++H + +    + DVF+
Sbjct: 177 NGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFI 236

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAKC  ++ +   F  +  R+  +W+++I    ++ R+ + +  F  M+++ +
Sbjct: 237 GSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKV 296

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P    F  ++ AC +      GK +H+ +I+LG    + + +S+L +Y KCG +  AR 
Sbjct: 297 KPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARY 356

Query: 214 FFESMD--EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
            F  ++  ++D V+W ++I G    G   +A  LF++M  + +K   V F  ++ + +  
Sbjct: 357 IFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHA 416

Query: 272 GQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  D   +    M+   G+ P +  +  +     + GR  +A D    M   G  P G  
Sbjct: 417 GLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNM---GEEPTGSV 473

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERV 385
            ++ ++AC   K + +  ++     K+   D   +G  +I  N+YS  +    A ++
Sbjct: 474 WSTLLAACRAHKNIELAEKV---VNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKL 527



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 115/528 (21%), Positives = 224/528 (42%), Gaps = 77/528 (14%)

Query: 10  QQLHSLLTK--KSNPRFRDTHLDFLC------GNGRLNEAITVLDSIATQGAKVRRNTYI 61
           +QLH+ + K  K+ P      L ++C       +G L  ++   + + + G    R+ + 
Sbjct: 25  KQLHAQIVKTTKATPH----SLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFP 80

Query: 62  NLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGC-------------- 106
           +LL+A       +LA+ LHA  + L    D++    L+++Y+K                 
Sbjct: 81  SLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHN 140

Query: 107 --------LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
                   +D  R++F+ M  R++ +W+ +I   +++  + E + +   M ++ L PD F
Sbjct: 141 HNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSF 200

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
               IL       +   GK +H   I+ G      + +S++ +Y KC ++  +   F  +
Sbjct: 201 TLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLL 260

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
             +D ++WNS+I+G  Q G  D+    F +M +E++K   V+F+ +I +   L   ++  
Sbjct: 261 SNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGK 320

Query: 279 EMVKRMESLGITP---------------------------------DVFTWTCMISGFAQ 305
           ++   +  LG                                    D+ +WT +I G A 
Sbjct: 321 QLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAM 380

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFTDDVL 364
           +G    A+ LF+EM   GV P  V   + ++AC+    +  G +  +S+    G    + 
Sbjct: 381 HGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLE 440

Query: 365 VGNSLINMYSKCEELEAA-ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
              ++ ++  +   LE A + + +M ++     W++++A  C+A    K  EL  K+   
Sbjct: 441 HYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAA-CRA---HKNIELAEKVVNK 496

Query: 424 D--VPPNVITWNVLISG-YIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
              V P  +  +V++S  Y       +A  L  RM K    K    SW
Sbjct: 497 ILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACSW 544



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 24/216 (11%)

Query: 531 LESSLPVMNSLI---DTYAKSGNI--VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
           + SS  VM SL+   +T   + ++  ++++ +    ++   + W  +I  Y  HG    +
Sbjct: 1   MSSSQNVMRSLLRNPNTVVPTCHVKQLHAQIVKTTKATPHSLAWICIIKCYASHGLLRHS 60

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           L  F+ ++SFG+ P+R  F S++ A +L    +L + +  +      +I +  H+    D
Sbjct: 61  LASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAA------VIRLGFHF----D 110

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN-IDLAVLAIERLFDLEP-GDV 703
           LY  +  +    +F       P  S       A   H N   + + ++ +LFD  P  DV
Sbjct: 111 LYTANALMNMYSKF------HPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDV 164

Query: 704 LIQRLILQIYAICGKPEDALK-VRKLERENTRRNSF 738
           +    ++   A  G  E+AL  V+++ +EN R +SF
Sbjct: 165 VSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSF 200


>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
 gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
          Length = 702

 Score =  362 bits (928), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 226/705 (32%), Positives = 375/705 (53%), Gaps = 51/705 (7%)

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           + E +      ++SVYAK G ++ AR +F+ M  RNL +W+ M+  Y  + ++ E  +LF
Sbjct: 1   MAEKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLF 60

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFE-AGKLMHSL--VIKLGMSCVRRVRNSVLAVY 202
            +M +  LF     +  ++      G+ E A +L  SL    + G++C     N++++ Y
Sbjct: 61  VIMPRRDLFS----WTLMITCYTRNGEVEKARELFDSLPCSYRKGVACW----NAMISGY 112

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
           VK G++  A+R F+ M  K+ ++WNSM++GY Q  +       F++M   +    VV++N
Sbjct: 113 VKKGRVNEAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERD----VVSWN 168

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
           +++  + Q+G  D A +  +  +     P+V +W  M+SGFA+NG   ++  LF +M   
Sbjct: 169 LMVDGFIQVGDLDSAWKFFQETQK----PNVVSWVTMLSGFARNGNILESRRLFDQMPSR 224

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLA-----------VKMGFTDD--------- 362
            ++     I++ +  C   +A  +  E+               V++G  D+         
Sbjct: 225 NIVSWNAMISAYVQRCEIDEASRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMP 284

Query: 363 ---VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
              +    ++I+ Y +C +++ A R FD I   DV  WN+MIAGY   G   +A  L  +
Sbjct: 285 YRNIGAQTAMISGYIQCNKVDEARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKR 344

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M   D    ++TWN +IS Y Q G  D AV +F+ MG+ D V     SWNSLIAG+   G
Sbjct: 345 MVNKD----MVTWNTMISCYAQVGQMDRAVKIFEEMGERDLV-----SWNSLIAGFMLNG 395

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
           Q  +AL  F  M      P+ ++    L +CA + A     ++H  V++    + L V N
Sbjct: 396 QNLDALKSFALMGHEGKKPDQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNN 455

Query: 540 SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
           +LI  YAK G I+ +  +F+G+   D+I+WNSLI GY ++G+   AL LF++M S G+ P
Sbjct: 456 ALITMYAKCGRILEAGLVFNGICHADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAP 515

Query: 600 NRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEF 659
           +  TF+ I+ A + AGMVD G K+F  +++ Y I P+ EHY+ M+DL GR G+L+EA E 
Sbjct: 516 DEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEI 575

Query: 660 IEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKP 719
           +  M ++  + +W ALL ACR HGN++L  LA  +L + EP       L+  I+A   + 
Sbjct: 576 VRGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSNIHAEANRW 635

Query: 720 EDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDL 764
            +  +VR L   ++     G  W+EV+N V+ F++   + S  D+
Sbjct: 636 NEVQEVRMLMNASSTVKEPGCSWVEVRNQVHGFLSDDSTRSRPDI 680


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  362 bits (928), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 218/644 (33%), Positives = 337/644 (52%), Gaps = 67/644 (10%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P+ F W  MI G+++ G  + A+ ++ EM   GVMP+  T    +   T   A+  G E+
Sbjct: 82  PNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGREL 141

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H   VK+GF+ +V V N+LI++YS   E+  A  VFD     DV +WN MI+GY ++   
Sbjct: 142 HDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQF 201

Query: 411 GKAYELFIKMQESDVPPNVITW-----------------------------------NVL 435
            ++ +LF +M+   V P+ IT                                    N L
Sbjct: 202 DESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENAL 261

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKV--------------------------KRNTASWN 469
           I  Y   G+ D A+ +F  M   D +                          +R+  SW 
Sbjct: 262 IDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWT 321

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           ++I GY Q+ +    L +FR+MQ++   P+  T++S+L ACA+L A    + I   + + 
Sbjct: 322 AMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKN 381

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            ++    V N+LID Y   GN+  +  IF+ M  +D I+W ++I G  ++G+   ALD+F
Sbjct: 382 EIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMF 441

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            QM    + P+  T + ++ A + +GMVD GKK F  +T  + I P + HY  M+DL GR
Sbjct: 442 SQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGR 501

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +G L+EA E I++MP++P+S +W +LL ACR+H + ++A +A +++ +LEP +  +  L+
Sbjct: 502 AGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLL 561

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             IYA C + E   +VRKL  +   + + G   IE+   V+ FV G      S  +YS L
Sbjct: 562 CNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQSKEIYSKL 621

Query: 770 QNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
             +  ++     +  +S   L I EEEKE     HSEKLA+AF LI S     TIRIVKN
Sbjct: 622 DEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEKLAIAFGLISSGPGV-TIRIVKN 680

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +RMCV CH  AK VS +++ E+ + D    HHF++G CSC DYW
Sbjct: 681 LRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCSCKDYW 724



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 135/533 (25%), Positives = 234/533 (43%), Gaps = 71/533 (13%)

Query: 43  TVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA---FLNLVTEIDVFVKTKLLS 99
           T L    T    + +   ++L++ C    S+   +++H+      L++   V  +     
Sbjct: 5   TTLSPPPTHLPSLPQTPPLSLIKTC---KSMAQLKQIHSQTICTGLISNPIVPAQIIAFC 61

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
              + G ++ AR VF+ M   N + W+ MI  YSR       V ++  M++ G+ PD++ 
Sbjct: 62  CKHELGDMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYT 121

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           +P +L+        + G+ +H  ++KLG S    V+N+++ +Y   G++  AR  F+   
Sbjct: 122 YPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSS 181

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------ 261
           + D V WN MISGY +  + DE+ +LFD+M R  +    +T                   
Sbjct: 182 KGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKR 241

Query: 262 -----------------NILIRSYNQLGQCDVAMEMVKRMES------------------ 286
                            N LI  Y   G  D A+ +   M+S                  
Sbjct: 242 VHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQ 301

Query: 287 LGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
           +G+  + F         +WT MI G+ Q  R  + L LF+EM    + P+  T+ S ++A
Sbjct: 302 VGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTA 361

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C  L AL +G  I +   K     D  VGN+LI+MY  C  +E A R+F+ +  +D  SW
Sbjct: 362 CAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISW 421

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
            ++I G    GY  +A ++F +M ++ + P+ +T   ++     +G  D+    F RM  
Sbjct: 422 TAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTT 481

Query: 458 NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
              ++ N A +  ++    + G    A  V + M      PN +   S+L AC
Sbjct: 482 QHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVK---PNSIVWGSLLGAC 531



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/391 (24%), Positives = 174/391 (44%), Gaps = 37/391 (9%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKT 95
           + +E++ + D +          T +++L AC     +++ +++H ++ +L  E    ++ 
Sbjct: 200 QFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLEN 259

Query: 96  KLLSVYAKCGCLDD-------------------------------AREVFEDMRERNLYT 124
            L+ +YA CG +D                                AR  F+ M ER+  +
Sbjct: 260 ALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVS 319

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           W+AMI  Y +  R++EV+ LF  M    + PD+F    IL AC + G  E G+ + + + 
Sbjct: 320 WTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYID 379

Query: 185 KLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHR 244
           K  +     V N+++ +Y  CG +  A R F +M  +D ++W ++I G    G  +EA  
Sbjct: 380 KNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALD 439

Query: 245 LFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGF 303
           +F +M +  I    VT   ++ +    G  D   +   RM +  GI P+V  + CM+   
Sbjct: 440 MFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLL 499

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
            + G   +A ++ K M    V PN +   S + AC   +   M  E+ +  +     ++ 
Sbjct: 500 GRAGHLKEAHEVIKNMP---VKPNSIVWGSLLGACRVHRDEEMA-EMAAQQILELEPENG 555

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
            V   L N+Y+ C   E    V  ++ D+ +
Sbjct: 556 AVYVLLCNIYAACNRWEKLHEVRKLMMDRGI 586


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  361 bits (927), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 217/676 (32%), Positives = 357/676 (52%), Gaps = 23/676 (3%)

Query: 203 VKCGKLIWARRFFESMDEK-----DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           V+  ++  A+R    M+       D    N ++  Y + G+  +A  LFDKM + +I   
Sbjct: 33  VRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDI--- 89

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
             ++N L+ +Y + G          RM       D  ++   I+GF+ N    ++L+LFK
Sbjct: 90  -FSWNALLSAYAKSGSIQNLKATFDRMP----FRDSVSYNTTIAGFSGNSCPQESLELFK 144

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
            M   G  P   TI S ++A   L  L  G +IH   +   F  +V + N+L +MY+KC 
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           E+E A  +FD +  K++ SWN MI+GY + G   K   L  +M+ S   P+ +T + +I+
Sbjct: 205 EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIA 264

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
            Y Q G  DEA  +F    + D V      W +++ GY + G++ +AL +F +M      
Sbjct: 265 AYCQCGRVDEARRVFSEFKEKDIV-----CWTAMMVGYAKNGREEDALLLFNEMLLEHIE 319

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P+  T+ SV+ +CA L + +  + +HG  +   L ++L V ++LID Y+K G I  +R++
Sbjct: 320 PDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSV 379

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           F+ M ++++++WN++I G   +G    AL+LF+ M     KP+  TF+ I+ A      +
Sbjct: 380 FNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWI 439

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
           + G++ F SIT  + + P ++HY+ M++L GR+G++E+A+  I++M  +PD  IW  LL+
Sbjct: 440 EQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499

Query: 678 ACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNS 737
            C   G+I  A +A   LF+L+P   +   ++  +YA  G+ +D   VR L +    +  
Sbjct: 500 ICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKF 559

Query: 738 FGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEK 792
            G  WIE+ N V+ F +   +   S+ +Y  L  +      E  T  ++     + E+EK
Sbjct: 560 AGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEK 619

Query: 793 EEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
            +    HSEKLALAF LI        IRI+KNIR+C  CHE  K+ S +   +I L DS 
Sbjct: 620 FKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSN 679

Query: 853 CLHHFKNGQCSCGDYW 868
             HHF  G+CSC D W
Sbjct: 680 RFHHFSTGKCSCNDNW 695



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 194/361 (53%), Gaps = 9/361 (2%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D+F    LLS YAK G + + +  F+ M  R+  +++  I  +S +   +E +ELF  M 
Sbjct: 88  DIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           ++G  P ++    IL A     D   GK +H  +I         + N++  +Y KCG++ 
Sbjct: 148 REGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            AR  F+ + +K+ V+WN MISGY + G+ ++   L  +M         VT + +I +Y 
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYC 267

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           Q G+ D A    +R+ S     D+  WT M+ G+A+NGR   AL LF EM    + P+  
Sbjct: 268 QCGRVDEA----RRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSY 323

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           T++S +S+C  L +L  G  +H  ++  G  +++LV ++LI+MYSKC  ++ A  VF+++
Sbjct: 324 TLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLM 383

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-----YIQNGN 444
             ++V SWN+MI G  Q G+   A ELF  M +    P+ +T+  ++S      +I+ G 
Sbjct: 384 PTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQ 443

Query: 445 E 445
           E
Sbjct: 444 E 444



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 158/317 (49%), Gaps = 16/317 (5%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D    + +++ Y +CG +D+AR VF + +E+++  W+AM+  Y+++ R  + + LF  M+
Sbjct: 255 DQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEML 314

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            + + PD +    ++ +C        G+ +H   I  G++    V ++++ +Y KCG + 
Sbjct: 315 LEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFID 374

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            AR  F  M  ++ V+WN+MI G  Q G + +A  LF+ M +++ K   VTF  ++ +  
Sbjct: 375 DARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACL 434

Query: 270 QLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
                +   E    + +  G+TP +  + CM++   + GR  QA+ L K M+     P+ 
Sbjct: 435 HCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHD---PDF 491

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI---NMYSKCEELEAAERV 385
           +  ++ +S C+  K   +  E+   A +  F  D  +    I   NMY+     +    V
Sbjct: 492 LIWSTLLSICS-TKGDIVNAEV---AARHLFELDPTIAVPYIMLSNMYASMGRWKDVASV 547

Query: 386 FDMIKDKDV-----YSW 397
            +++K K+V     +SW
Sbjct: 548 RNLMKSKNVKKFAGFSW 564



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/422 (23%), Positives = 181/422 (42%), Gaps = 82/422 (19%)

Query: 24  FRD-----THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARK 78
           FRD     T +    GN    E++ +   +  +G +    T +++L A    + +   ++
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQ 176

Query: 79  LHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 137
           +H  + +   + +VF+   L  +YAKCG ++ AR +F+ + ++NL +W+ MI  Y+++ +
Sbjct: 177 IHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQ 236

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
             + + L   M   G  PD                            ++ MS       +
Sbjct: 237 PEKCIGLLHQMRLSGHMPD----------------------------QVTMS-------T 261

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK-- 255
           ++A Y +CG++  ARR F    EKD V W +M+ GY + G  ++A  LF++M  E I+  
Sbjct: 262 IIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPD 321

Query: 256 ----------------------------LGVVTFNILIRS-----YNQLGQCDVAMEMVK 282
                                       L  +  N+L+ S     Y++ G  D A  +  
Sbjct: 322 SYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFN 381

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
            M     T +V +W  MI G AQNG    AL+LF+ M      P+ VT    +SAC    
Sbjct: 382 LMP----TRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCN 437

Query: 343 ALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEELE-AAERVFDMIKDKDVYSWNSM 400
            +  G E   S+  + G T  +     ++N+  +   +E A   + +M  D D   W+++
Sbjct: 438 WIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTL 497

Query: 401 IA 402
           ++
Sbjct: 498 LS 499


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 209/617 (33%), Positives = 330/617 (53%), Gaps = 27/617 (4%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+R+Y+  G+  VA  +  R     +  +V  +  MI  +  N    +AL +F+ M    
Sbjct: 77  LMRAYSAQGETSVARYIFDR----SLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCA 132

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
             P+  T    + AC+ L  L +G+++H   VK+G   ++ +GN+L+ MY KC  L  A 
Sbjct: 133 FNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREAR 192

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL--ISGYIQ 441
           +V D +  +DV SWNSM+AGY Q+G    A E+  +M   ++  +  T   L  +  Y  
Sbjct: 193 KVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDSLNLNHDAGTMASLSPVVCYTS 252

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
             N     ++F+RM      K+N  SWN +IA Y      N A+ +F +M+     P+ V
Sbjct: 253 LENVQYIHNMFERM-----TKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAV 307

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           TI S+LPAC  L A    + +H  + + +L  +L + N+L+D YAK G +  +R +FD M
Sbjct: 308 TIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKM 367

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
             +D+++W S++  Y   G  + A+ LF +M   G  P+   F+S++ A S  G++D G+
Sbjct: 368 RLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR 427

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
             F  +TE Y I+P IEH++ M+DL+GR+G++EEA  FI+ MP+EP+  +W ALL+ACR+
Sbjct: 428 HYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRV 487

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H  +D+ ++A + LF L P       L+  IYA  G  +D + VR   ++   +   G  
Sbjct: 488 HSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKVPGIS 547

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQ----------NVPENVTARSSHSGLCIEEEE 791
            +E+   V+TF+ G      +  +Y  L            +P+  +A        +E E+
Sbjct: 548 NVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQTESALHD-----VEVED 602

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           KE    IHSEKLA+ FA++ + Q    IRI KN+R+C  CH   K +S +    I + D 
Sbjct: 603 KECHLAIHSEKLAIVFAILNTKQGT-PIRITKNLRVCGDCHIAIKLISKIVSRNIIVRDC 661

Query: 852 KCLHHFKNGQCSCGDYW 868
              HHF NG CSCGDYW
Sbjct: 662 NRFHHFSNGICSCGDYW 678



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 220/442 (49%), Gaps = 11/442 (2%)

Query: 73  IHLARKLHA--FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIG 130
           I    KLH+   +N    ID  +  KL+  Y+  G    AR +F+   E+N+  ++ MI 
Sbjct: 51  IKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSLEKNVVFFNVMIR 110

Query: 131 AYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSC 190
           +Y  +  + E + +F +M+     PD + FP +L+AC    +   G  +H  ++K+G+  
Sbjct: 111 SYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDT 170

Query: 191 VRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC 250
              + N+++A+Y KCG L  AR+  + M  +D V+WNSM++GY Q G+ D+A  +  +M 
Sbjct: 171 NLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMD 230

Query: 251 REEIKLGVVTFNIL--IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR 308
              +     T   L  +  Y  L        M +RM       ++ +W  MI+ +  N  
Sbjct: 231 SLNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTK----KNLISWNVMIAIYVNNSM 286

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
            ++A+ LF +M   G+ P+ VTI S + AC DL AL +G  +H    K     ++L+ N+
Sbjct: 287 PNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENA 346

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           L++MY+KC  LE A  VFD ++ +DV SW SM++ Y ++G    A  LF KM +S   P+
Sbjct: 347 LLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPD 406

Query: 429 VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
            I +  ++S     G  D+    F+ M +   +      +  ++  + + G+   A    
Sbjct: 407 SIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFI 466

Query: 489 RKMQSSCFYPNCVTILSVLPAC 510
           ++M      PN     ++L AC
Sbjct: 467 KQMPME---PNERVWGALLSAC 485



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 122/235 (51%), Gaps = 11/235 (4%)

Query: 6   LTTFQQLHSLLTK--KSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINL 63
           L   Q +H++  +  K N    +  +     N   NEA+++   +   G K    T  +L
Sbjct: 253 LENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASL 312

Query: 64  LQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           L AC D +++ L R+LH ++   NL    ++ ++  LL +YAKCGCL++AR+VF+ MR R
Sbjct: 313 LPACGDLSALFLGRRLHKYIEKGNL--RPNLLLENALLDMYAKCGCLEEARDVFDKMRLR 370

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           ++ +W++M+ AY R  +  + V LF  M+  G  PD   F  +L AC + G  + G+   
Sbjct: 371 DVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHYF 430

Query: 181 SLVIKLGMSCVRRVRN--SVLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISG 232
            ++ +     V R+ +   ++ ++ + G++  A  F + M  E +   W +++S 
Sbjct: 431 RMMTE-QYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSA 484


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  361 bits (927), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 247/804 (30%), Positives = 381/804 (47%), Gaps = 129/804 (16%)

Query: 192 RRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR 251
           R +   V+A Y+ CG   +A    E +     V WN +I  + + G  D A  +  +M R
Sbjct: 51  RSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLR 110

Query: 252 EEIKLGVVTF-----------------------------------NILIRSYNQLGQCDV 276
              +L   T                                    N L+  Y++ G  + 
Sbjct: 111 AGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEE 170

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF-VGVMPNG-----VT 330
           A  +   +   GI  DV +W  ++S   ++     ALDLF +M+  V   P       ++
Sbjct: 171 ASMIFDEITQRGID-DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIIS 229

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
           I + + AC  LKA+    E+H  A++ G   DV VGN+LI+ Y+KC  +E A +VF+M++
Sbjct: 230 IVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMME 289

Query: 391 DKDVYSWNSM-----------------------------------IAGYCQAGYCGKAYE 415
            KDV SWN+M                                   IAGY Q G   +A  
Sbjct: 290 FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALN 349

Query: 416 LFIKMQESDVPPNVITW-------------------------NVLISGYIQNGNEDE--- 447
           +F +M  S   PN +T                          N L++     G EDE   
Sbjct: 350 VFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLM 409

Query: 448 ----AVDLFQRMGKNDKVK----------RNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
                +D++ +       +          RN  +W  +I G+ Q G  N+AL +F +M S
Sbjct: 410 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 469

Query: 494 SCF--YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL--ESSLPVMNSLIDTYAKSG 549
             +   PN  TI  +L ACA+L A    K+IH  VLR      S+  V N LI+ Y+K G
Sbjct: 470 EPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCG 529

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
           ++  +R +FD MS K  I+W S++ GY +HG    ALD+FD+M+  G  P+  TFL ++ 
Sbjct: 530 DVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLY 589

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDS 669
           A S  GMVD G   F S++  Y + P  EHY+  IDL  R G+L++A + ++DMP+EP +
Sbjct: 590 ACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTA 649

Query: 670 SIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLE 729
            +W ALL+ACR+H N++LA  A+ +L ++   +     LI  IYA  G+ +D  ++R L 
Sbjct: 650 VVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLM 709

Query: 730 RENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA-----RSSHSG 784
           +++  +   G  W++ +    +F  G  S   S  +Y+ L+++ + + A      ++ + 
Sbjct: 710 KKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFAL 769

Query: 785 LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
             ++EEEK  +   HSEKLALA+ L+ +      IRI KN+R+C  CH    Y+S +   
Sbjct: 770 HDVDEEEKNNLLVEHSEKLALAYGLLTTFPGC-PIRITKNLRVCGDCHSAFTYISKIVDH 828

Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
           EI + D    HHFKNG CSCG YW
Sbjct: 829 EIVVRDPSRFHHFKNGSCSCGGYW 852



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 148/538 (27%), Positives = 244/538 (45%), Gaps = 101/538 (18%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           GRL+ AI V   +   G ++   T  ++L+AC +  S       H  +     E +VF+ 
Sbjct: 96  GRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFIC 155

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRER---NLYTWSAMIGAYSRDQRWREVVELFFLMV-- 149
             L+++Y++CG L++A  +F+++ +R   ++ +W++++ A+ +       ++LF  M   
Sbjct: 156 NALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLI 215

Query: 150 ----QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
                     D      IL ACG+       K +H   I+ G      V N+++  Y KC
Sbjct: 216 VHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKC 275

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G +  A + F  M+ KD V+WN+M++GY Q G    A  LF  M +E I L +VT+  +I
Sbjct: 276 GLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVI 335

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             Y+Q G    A+ + ++M   G  P+  T                              
Sbjct: 336 AGYSQRGCSHEALNVFRQMIFSGSLPNCVT------------------------------ 365

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKM----------GFTDDVLVGNSLINMYSK 375
                I S +SAC  L A + GMEIH+ ++K           G  +D++V N+LI+MYSK
Sbjct: 366 -----IISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSK 420

Query: 376 CEELEAAERVFDMI--KDKDVYSWNSMIAGYCQAGYCGKAYELFIKM--QESDVPPNVIT 431
           C   +AA  +FD I  ++++V +W  MI G+ Q G    A +LF++M  +   V PN  T
Sbjct: 421 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 480

Query: 432 -------------------------------------WNVLISGYIQNGNEDEAVDLFQR 454
                                                 N LI+ Y + G+ D A  +F  
Sbjct: 481 ISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDS 540

Query: 455 MGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
           M +   +     SW S++ GY   G+ + AL +F KM+ + F P+ +T L VL AC++
Sbjct: 541 MSQKSAI-----SWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 593



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 153/318 (48%), Gaps = 21/318 (6%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF------LNLVTEI--- 89
           +EA+ V   +   G+     T I++L AC    +     ++HA+      L L  +    
Sbjct: 345 HEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGE 404

Query: 90  --DVFVKTKLLSVYAKCGCLDDAREVFED--MRERNLYTWSAMIGAYSRDQRWREVVELF 145
             D+ V   L+ +Y+KC     AR +F+D  + ERN+ TW+ MIG +++     + ++LF
Sbjct: 405 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLF 464

Query: 146 FLMVQD--GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM--SCVRRVRNSVLAV 201
             M+ +  G+ P+ +    IL AC +      GK +H+ V++     S    V N ++ +
Sbjct: 465 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINM 524

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           Y KCG +  AR  F+SM +K  ++W SM++GY   G   EA  +FDKM +       +TF
Sbjct: 525 YSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITF 584

Query: 262 NILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
            +++ + +  G  D  +     M +  G+TP    +   I   A+ GR  +A    K+M 
Sbjct: 585 LVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMP 644

Query: 321 FVGVMPNGVTITSAISAC 338
              + P  V   + +SAC
Sbjct: 645 ---MEPTAVVWVALLSAC 659



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 7/204 (3%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYI--NLLQACIDSNSIHLARKLHAFLNLVTEID--- 90
           G  N+A+ +   + ++   V  N Y    +L AC    +I + +++HA++    + D   
Sbjct: 455 GDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSA 514

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            FV   L+++Y+KCG +D AR VF+ M +++  +W++M+  Y    R  E +++F  M +
Sbjct: 515 YFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRK 574

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            G  PDD  F  +L AC +CG  + G     S+    G++         + +  + G+L 
Sbjct: 575 AGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLD 634

Query: 210 WARRFFESMD-EKDGVAWNSMISG 232
            A +  + M  E   V W +++S 
Sbjct: 635 KAWKTVKDMPMEPTAVVWVALLSA 658


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  361 bits (927), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 230/810 (28%), Positives = 401/810 (49%), Gaps = 95/810 (11%)

Query: 51  QGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VFVKTKLLSVYAKC---- 104
           Q    ++ T+ ++ Q C D  ++   ++ HA + ++TE    VFV   L+ +Y KC    
Sbjct: 36  QATPTKKKTFSHIFQECSDRKALCPGKQAHARM-ILTEFKPTVFVTNCLIQMYIKCSDLE 94

Query: 105 ---------------------------GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 137
                                      G +  A+++F+ M ER++ +W+++I  Y  +  
Sbjct: 95  FAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGD 154

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
            R+V+++F  M + G   D   F  +L++C +  D   G  +H L +K+G  C     ++
Sbjct: 155 HRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSA 214

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           +L +Y KC KL  + +FF SM EK+ V+W+++I+G  Q  +      LF +M +  + + 
Sbjct: 215 LLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVS 274

Query: 258 VVTFNILIRSYNQLGQ-----------------CDV-----AMEMVKRMESLGITPDVF- 294
             TF  + RS   L                    DV      ++M  +  +L     +F 
Sbjct: 275 QSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFN 334

Query: 295 --------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
                   ++  +I G+A++ +  +AL +F+ +   G+  + V+++ A  AC  +K    
Sbjct: 335 SLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLE 394

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G+++H L++K     ++ V N++++MY KC  L  A  VF+ +  +D  SWN++IA + Q
Sbjct: 395 GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQ 454

Query: 407 AGYCGKAYELFIKMQESDVPPNVIT----------WNVLISGY-IQN-------GNED-- 446
            G   K   LF+ M +S + P+  T          W  L  G  I N       G +   
Sbjct: 455 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFV 514

Query: 447 --EAVDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
               +D++ + G  +K ++           SWN++I+G+    Q   A   F KM     
Sbjct: 515 GIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGV 574

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            P+  T  ++L  CA LV     K+IH  ++++ L+S   + ++L+D Y+K GN+   + 
Sbjct: 575 DPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQL 634

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           IF+   ++D +TWN+++CGY  HG    AL +F+ M+   +KPN  TFL+++ A    G+
Sbjct: 635 IFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGL 694

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           V+ G   F S+   Y + P +EHYS ++D+ GRSG++ +A+E IE MP E D+ IW  LL
Sbjct: 695 VEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLL 754

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
           + C+IHGN+++A  A   +  LEP D     L+  IYA  G   +  K+RK+ R N  + 
Sbjct: 755 SICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKK 814

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
             G  WIE+K+ V+ F+ G  +   S  +Y
Sbjct: 815 EPGCSWIEIKSEVHAFLVGDKAHPRSKEIY 844



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 239/513 (46%), Gaps = 45/513 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N  L   + +   +   G  V ++T+ ++ ++C   +++ L  +LH   L      DV +
Sbjct: 253 NDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVI 312

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T  L +Y KC  L DA+++F  +   NL +++A+I  Y+R  +  E + +F L+ + GL
Sbjct: 313 GTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGL 372

Query: 154 FPDDFLFPKILQACGNC-GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             D+       +AC    GD E G  +H L +K        V N++L +Y KCG L+ A 
Sbjct: 373 GLDEVSLSGAFRACAVIKGDLE-GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEAC 431

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM----------------------- 249
             FE M  +D V+WN++I+ + Q G  ++   LF  M                       
Sbjct: 432 LVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQ 491

Query: 250 ---CREEI-------KLGVVTFN--ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
              C  EI       +LG+ +F    LI  Y++ G     ME  +++        V +W 
Sbjct: 492 ALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGM----MEKAEKLHDRLAEQTVVSWN 547

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            +ISGF+   ++ +A   F +M  +GV P+  T  + +  C +L  + +G +IH+  +K 
Sbjct: 548 AIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK 607

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
               D  + ++L++MYSKC  ++  + +F+   ++D  +WN+M+ GY Q G   +A ++F
Sbjct: 608 ELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIF 667

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
             MQ  +V PN  T+  ++      G  ++ +  F  M  N  +      ++ ++    +
Sbjct: 668 EYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGR 727

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            GQ + AL +   M    F  + V   ++L  C
Sbjct: 728 SGQVSKALELIEGMP---FEADAVIWRTLLSIC 757


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 240/791 (30%), Positives = 389/791 (49%), Gaps = 105/791 (13%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMR--ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           T L++  A  G L DA   F+ +    R+    +AM+ A++R       V +F  ++  G
Sbjct: 96  TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155

Query: 153 -LFPDDFLFPKILQACGNCGDFEAGKL--MHSLVIKLGMSCVRRVRNSVLAVYVKCG--K 207
            L PDD+ F  ++ A G   +  A     +H  V+K G + V  V N+++A+Y+KC   +
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215

Query: 208 LIW-ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
             W AR+  + M +KD + W +M+ GY + G+ + A  +F     EE+            
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVF-----EEVD----------- 259

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
                G+ DV                   W  MISG+ Q+G  + A +LF+ M    V  
Sbjct: 260 -----GKFDV------------------VWNAMISGYVQSGMCADAFELFRRMVSEKVPL 296

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKM--GFTDDVL--VGNSLINMYSKCEELEAA 382
           +  T TS +SAC +      G  +H   +++   F  +    V N+L+ +YSK  ++  A
Sbjct: 297 DEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIA 356

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
           +R+FD +  KDV                                   ++WN ++SGYI +
Sbjct: 357 KRIFDTMNLKDV-----------------------------------VSWNTILSGYIDS 381

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G  D+AV++F+ M       +N  SW  +++GY   G   +AL +F +M++    P   T
Sbjct: 382 GCLDKAVEVFKVM-----PYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYT 436

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
               + AC  L A    +++H  +++   E+S    N+L+  YAK G +  +R +F  M 
Sbjct: 437 YAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMP 496

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
           + D ++WN++I     HG    AL+LFDQM + G+ P+R +FL+I+ A + AG+VD G  
Sbjct: 497 NLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFH 556

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F S+   + I P  +HY+ +IDL GRSG++ EA + I+ MP EP  SIWEA+L+ CR +
Sbjct: 557 YFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTN 616

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
           G+++    A ++LF + P       L+   Y+  G+  DA +VRKL R+   +   G  W
Sbjct: 617 GDMEFGAYAADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCSW 676

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKE 793
           IEV + ++ F+ G      +  +Y +L    E + AR    G           +E  EKE
Sbjct: 677 IEVGSKIHVFLVGDTKHPEAQEVYQFL----EVIGARMRKLGYVPDTKFVLHDMEPHEKE 732

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
            I   HSEKLA+ F L+       T+ ++KN+R+C  CH    ++S     EI + D + 
Sbjct: 733 YILFAHSEKLAVGFGLLKLPPGA-TVTVLKNLRICGDCHTAMMFMSKAVGREIVVRDVRR 791

Query: 854 LHHFKNGQCSC 864
            HHFK+G+CSC
Sbjct: 792 FHHFKDGECSC 802



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 213/457 (46%), Gaps = 49/457 (10%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           N  I L   C    +   ARK+   L+ + + D    T ++  Y + G ++ AR VFE++
Sbjct: 202 NALIALYMKCDTPEASWDARKV---LDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEV 258

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             +    W+AMI  Y +     +  ELF  MV + +  D+F F  +L AC N G F  GK
Sbjct: 259 DGKFDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGK 318

Query: 178 LMHSLVIKLGMSCVRR----VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
            +H  +I+L  + V      V N+++ +Y K GK++ A+R F++M+ KD V+WN+++SGY
Sbjct: 319 SVHGQIIRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGY 378

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
              G  D+A  +F  M  +                N L                      
Sbjct: 379 IDSGCLDKAVEVFKVMPYK----------------NDL---------------------- 400

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            +W  M+SG+   G +  AL LF +M    V P   T   AI+AC +L AL  G ++H+ 
Sbjct: 401 -SWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAH 459

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            V+ GF      GN+L+ MY+KC  +  A  VF ++ + D  SWN+MI+   Q G+  +A
Sbjct: 460 LVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREA 519

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            ELF +M    + P+ I++  +++     G  DE    F+ M ++  +      +  LI 
Sbjct: 520 LELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLID 579

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
              + G+   A  + + M    F P      ++L  C
Sbjct: 580 LLGRSGRIGEARDLIKTMP---FEPTPSIWEAILSGC 613



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 160/367 (43%), Gaps = 15/367 (4%)

Query: 31  FLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID 90
           F+ G     + I +  +   + A    N  + L         I +A+++   +NL    D
Sbjct: 314 FVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLYS---KGGKIVIAKRIFDTMNLK---D 367

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           V     +LS Y   GCLD A EVF+ M  +N  +W  M+  Y       + ++LF  M  
Sbjct: 368 VVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRA 427

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + + P D+ +   + ACG  G  + G+ +H+ +++ G        N++L +Y KCG +  
Sbjct: 428 EDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVND 487

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           AR  F  M   D V+WN+MIS   Q G   EA  LFD+M  E I    ++F  ++ + N 
Sbjct: 488 ARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNH 547

Query: 271 LGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G  D      + M+   GI+P    +  +I    ++GR  +A DL K M F    P   
Sbjct: 548 AGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPF---EPTPS 604

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFD 387
              + +S C     +  G        +M    D   G  ++  N YS       A RV  
Sbjct: 605 IWEAILSGCRTNGDMEFGAYAADQLFRMIPQHD---GTYILLSNTYSAAGRWVDAARVRK 661

Query: 388 MIKDKDV 394
           +++D+ V
Sbjct: 662 LMRDRGV 668


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  361 bits (926), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 239/780 (30%), Positives = 378/780 (48%), Gaps = 97/780 (12%)

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF- 234
           GK  H+ ++  G +    + N++L +Y KCG L  AR+ F++  E+D V WN+++  Y  
Sbjct: 96  GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 155

Query: 235 QIGEND----EAHRLFD------------------KMCREE-------------IKLG-- 257
            +  ND    E   LF                   K+C                IK+G  
Sbjct: 156 SVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLE 215

Query: 258 --VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             V     L+  Y++ G+   A  +   M       DV  W  M+ G+ Q G   +A  L
Sbjct: 216 WDVFVSGALVNIYSKCGRMRDARLLFDWMRE----RDVVLWNMMLKGYVQLGLEKEAFQL 271

Query: 316 FKEMSFVGVMPNGVTITSAISAC--TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
           F E    G+ P+  ++   ++ C       L +G ++H +AVK G   DV V NSL+NMY
Sbjct: 272 FSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMY 331

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW- 432
           SK      A  VF+ +K  D+ SWNSMI+   Q+    ++  LFI +    + P+  T  
Sbjct: 332 SKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLA 391

Query: 433 ---------------------------------------NVLISGYIQNGNEDEAVDLFQ 453
                                                  + ++  YI+ G+   A  +F 
Sbjct: 392 SITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFN 451

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
            +   D V     +W S+I+G    G ++ AL ++ +M+ S   P+  T  +++ A + +
Sbjct: 452 YISAPDDV-----AWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCV 506

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
            A  + +++H  V++    S   V  SL+D YAK GNI  +  +F  M+ ++I  WN+++
Sbjct: 507 TALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAML 566

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
            G   HG    A++LF  MKS G++P+R +F+ I+ A S AG+     +   S+   Y I
Sbjct: 567 VGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGI 626

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
            P IEHYS ++D  GR+G ++EA + IE MP +  +SI  ALL ACRI G+++       
Sbjct: 627 EPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAA 686

Query: 694 RLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFV 753
           RLF LEP D     L+  IYA   + +D    RK+ +    +   G  WI+VKN+++ FV
Sbjct: 687 RLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFV 746

Query: 754 TGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFA 808
               S   +D++Y  ++ + + +        +    L +E+EEKE     HSEKLA+A+ 
Sbjct: 747 VDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYG 806

Query: 809 LIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           LI S+ A  TIR++KN+R+C  CH   KY+S +   EI L D+   HHF++G CSCGDYW
Sbjct: 807 LI-STPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 227/496 (45%), Gaps = 39/496 (7%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           +G   E + +   +        R T   +L+ C++S  +  A  +H + + +  E DVFV
Sbjct: 161 DGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFV 220

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+++Y+KCG + DAR +F+ MRER++  W+ M+  Y +    +E  +LF    + GL
Sbjct: 221 SGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGL 280

Query: 154 FPDDFLFPKILQAC--GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            PD+F    IL  C      D E GK +H + +K G+     V NS++ +Y K G   +A
Sbjct: 281 RPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFA 340

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-NILIRSYNQ 270
           R  F  M   D ++WNSMIS   Q    +E+  LF  +  E +K    T  +I + +  +
Sbjct: 341 REVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASITLATAAK 400

Query: 271 LGQCDVAMEMVKRMESLGI-----------------------------------TPDVFT 295
              C V ++  K++ +  I                                    PD   
Sbjct: 401 ACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVA 460

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           WT MISG   NG   QAL ++  M    VMP+  T  + I A + + AL  G ++H+  +
Sbjct: 461 WTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVI 520

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K+    D  VG SL++MY+KC  +E A R+F  +  +++  WN+M+ G  Q G   +A  
Sbjct: 521 KLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVN 580

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           LF  M+   + P+ +++  ++S     G   EA +    M  +  ++     ++ L+   
Sbjct: 581 LFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDAL 640

Query: 476 QQLGQKNNALGVFRKM 491
            + G    A  V   M
Sbjct: 641 GRAGLVQEADKVIETM 656


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 242/753 (32%), Positives = 374/753 (49%), Gaps = 88/753 (11%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           F  +L+ C    D   GK +HSL IK  +       N  + +Y KCG+L WAR+ F+ + 
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
           + +  ++N++I+ Y +      AH+L                      ++Q+ +      
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQL----------------------FDQIPE------ 102

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
                      PD+ ++  +IS +A  G T+ AL LF  M  +G+  +G T+++ I+AC 
Sbjct: 103 -----------PDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACC 151

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWN 398
           D   + +  ++HS+AV  GF   V V N+L+  Y K  +L+ A+RVF  M   +D  SWN
Sbjct: 152 D--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWN 209

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---------------------NVLIS 437
           SMI  Y Q     KA  LF +M    +  ++ T                       ++ +
Sbjct: 210 SMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKT 269

Query: 438 GYIQNGNEDEA-VDLFQRMGKN---------DKVKRNTASWNSLIAGYQQLGQ-KNNALG 486
           G+ QN +     +DL+ + G           +  + +   WN++++GY Q  +   +AL 
Sbjct: 270 GFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALE 329

Query: 487 VFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS-LPVMNSLIDTY 545
            FR+MQ   + PN  + + V+ AC+ L + ++ K+IH   L+  + S+ + V N+LI  Y
Sbjct: 330 CFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMY 389

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
           +K GN+  +R +FD M+  + ++ NS+I GY  HG    +L LF  M    + P   TF+
Sbjct: 390 SKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFI 449

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
           S++ A +  G V+ G   F  + E + I P  EHYS MIDL GR+GKL EA   I  MP 
Sbjct: 450 SVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPF 509

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
            P S  W +LL ACR HGNI+LAV A  ++  LEP +     ++  +YA  G+ E+   V
Sbjct: 510 NPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATV 569

Query: 726 RKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPEN 775
           RK  R+   +   G  WIEVK  ++ FV    S      +Y +L+           VP+ 
Sbjct: 570 RKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDV 629

Query: 776 VTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETA 835
             A     G      EKE   G HSEKLA+AF LI S++    + +VKN+R+C  CH   
Sbjct: 630 RWALVKDDG--TRGGEKEIRLGHHSEKLAVAFGLI-STKDGEPVLVVKNLRICGDCHNAI 686

Query: 836 KYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           K++S +   EI + D+   H FK GQCSCGDYW
Sbjct: 687 KFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 236/518 (45%), Gaps = 72/518 (13%)

Query: 60  YINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           + +LL+ CI    +   + LH+ ++        +     + +Y+KCG L  AR+ F+D+ 
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 119 ERNLYTWSAMIGAYSRDQR-------WREVVE------------------------LFFL 147
           + N+++++A+I AY+++ R       + ++ E                        LF  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M + GL  D F    ++ AC  C D      +HS+ +  G      V N++L  Y K G 
Sbjct: 131 MREMGLDMDGFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188

Query: 208 LIWARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           L  A+R F  M   +D V+WNSMI  Y Q  E  +A  LF +M R  + + + T   ++ 
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248

Query: 267 SYNQL--------------------------------GQCDVAMEMVKRMESLGITPDVF 294
           ++  L                                 +C   M   +++      PD+ 
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308

Query: 295 TWTCMISGFAQNGR-TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            W  M+SG++QN      AL+ F++M  +G  PN  +    ISAC++L + + G +IHSL
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368

Query: 354 AVKMGF-TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
           A+K    ++ + V N+LI MYSKC  L+ A R+FD + + +  S NSMIAGY Q G   +
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEME 428

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
           +  LF  M E  + P  IT+  ++S     G  +E  + F  M +   ++     ++ +I
Sbjct: 429 SLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMI 488

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               + G+ + A  +  +M    F P  +   S+L AC
Sbjct: 489 DLLGRAGKLSEAENLIARMP---FNPGSIGWASLLGAC 523



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 198/480 (41%), Gaps = 59/480 (12%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
           G    A+ +   +   G  +   T   ++ AC D   + L  +LH+ + + +  D +V  
Sbjct: 119 GETAPALGLFSGMREMGLDMDGFTLSAVITACCDD--VGLIGQLHS-VAVSSGFDSYVSV 175

Query: 96  K--LLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              LL+ Y K G LDDA+ VF  M   R+  +W++MI AY + Q   + + LF  MV+ G
Sbjct: 176 NNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRG 235

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC-GKLIWA 211
           L  D F    +L A     D   G   H  +IK G      V + ++ +Y KC G +   
Sbjct: 236 LNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDC 295

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGE-------------------ND------------ 240
           R+ FE + E D V WN+M+SGY Q  E                   ND            
Sbjct: 296 RKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSN 355

Query: 241 -----EAHRLFDKMCREEIKLGVVTF-NILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                +  ++     + +I    ++  N LI  Y++ G    A  +  RM       +  
Sbjct: 356 LSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAE----HNTV 411

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSL 353
           +   MI+G+AQ+G   ++L LF+ M    + P  +T  S +SAC     +  G    + +
Sbjct: 412 SLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMM 471

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAER-VFDMIKDKDVYSWNSMIAGYCQAG---- 408
             K     +    + +I++  +  +L  AE  +  M  +     W S++ G C+      
Sbjct: 472 KEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLL-GACRTHGNIE 530

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
              KA    ++++ S+  P V+  N+    Y   G  +E   + + M      K+   SW
Sbjct: 531 LAVKAANQVLQLEPSNAAPYVVLSNM----YASAGRWEEVATVRKFMRDRGVKKKPGCSW 586


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 240/747 (32%), Positives = 372/747 (49%), Gaps = 85/747 (11%)

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
           R+ N++L++ V+ G+   A + F  M E+D  +WN M+ GY + G  +EA  L+ +M   
Sbjct: 130 RLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWA 189

Query: 253 EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT---------------------- 290
             +  V TF  ++RS   +    +  E+   +   G+                       
Sbjct: 190 GARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAA 249

Query: 291 ---------PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
                     D  +W  MI+G  +N      L+LF  M    V PN +TITS   A   L
Sbjct: 250 RKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLL 309

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
             L    EIH+LAVK GF  DV   NSLI MYS    +  A  VF  ++ +D  SW +MI
Sbjct: 310 SDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMI 369

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPN--------------------------------- 428
           +GY + G+  KA E++  M+ ++V P+                                 
Sbjct: 370 SGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFI 429

Query: 429 --VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALG 486
             ++  N L+  Y ++   ++A+++F+ M   D +     SW+S+IAG+    +   AL 
Sbjct: 430 RYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVI-----SWSSMIAGFCFNHKNFEALY 484

Query: 487 VFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
            FR M +    PN VT ++ L ACA   +    KEIH  VLR+ + S   V N+L+D Y 
Sbjct: 485 YFRHMLAD-VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYV 543

Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
           K G   Y+   F    +KD+++WN ++ G+V HG    AL  F++M   G  P+  TF++
Sbjct: 544 KCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVA 603

Query: 607 IILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
           ++   S AGMV  G ++F S+TE Y I+P ++HY+ M+DL  R G+L E   FI  MPI 
Sbjct: 604 LLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPIT 663

Query: 667 PDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR 726
           PD+++W ALL  CRIH NI+L  LA + + +LEP D     L+  +YA  G   +  KVR
Sbjct: 664 PDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVR 723

Query: 727 KLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC 786
           K  R     + +G  W+EVK  ++ F+T    ES+  +    + +V + +  R   SG  
Sbjct: 724 KTMRVKGLEHDYGCSWVEVKGAIHAFLTD--DESHPQI--KEINDVLDGIYERMKASGFA 779

Query: 787 ------IEEEE--KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
                 +E++E  K+++   HSE+LA+AF LI ++    +I + KN   C  CH   + +
Sbjct: 780 PVESYSLEDKEVSKDDVLCGHSERLAVAFGLINTTPGT-SICVTKNQYTCESCHGILRMI 838

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCG 865
           S +   EI + D+K  HHF++G CSCG
Sbjct: 839 SKIVRREITVRDTKEFHHFRDGSCSCG 865



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 167/618 (27%), Positives = 291/618 (47%), Gaps = 80/618 (12%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQAC-IDSNSIHLARKLHAFLNLVTEID 90
           LC +G L +A+ +L+S          + Y+ L   C     + H  R             
Sbjct: 72  LCAHGELQQALWLLES---SPEPPDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFG 128

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           + +   +LS+  + G    A +VF  M ER++++W+ M+G Y +     E ++L+  M+ 
Sbjct: 129 LRLGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLW 188

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G  PD + FP +L++CG   D   G+ +H+ V++ G+     V N+++ +Y KCG +  
Sbjct: 189 AGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEA 248

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------- 261
           AR+ F+ M   D ++WN+MI+G+F+  E +    LF  M  +E++  ++T          
Sbjct: 249 ARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGL 308

Query: 262 --------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                                     N LI+ Y+ LG+   A  +  RME    T D  +
Sbjct: 309 LSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRME----TRDAMS 364

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           WT MISG+ +NG   +AL+++  M    V P+ VT+ SA++AC  L  L +G+++H LA 
Sbjct: 365 WTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELAT 424

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
             GF   ++V N+L+ MY+K + +E A  VF  + DKDV SW+SMIAG+C   +  K +E
Sbjct: 425 SKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFC---FNHKNFE 481

Query: 416 --LFIKMQESDVPPNVITW---------------------NVLISGYIQNGNEDEA-VDL 451
              + +   +DV PN +T+                     +VL  G    G    A +DL
Sbjct: 482 ALYYFRHMLADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDL 541

Query: 452 FQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           + + G+             ++  SWN ++AG+   G  + AL  F +M  +  +P+ VT 
Sbjct: 542 YVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTF 601

Query: 504 LSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
           +++L  C+   + S   +  H    + S+  +L     ++D  ++ G +       + M 
Sbjct: 602 VALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMP 661

Query: 563 -SKDIITWNSLICGYVLH 579
            + D   W +L+ G  +H
Sbjct: 662 ITPDAAVWGALLNGCRIH 679


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  360 bits (925), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 255/895 (28%), Positives = 411/895 (45%), Gaps = 113/895 (12%)

Query: 52   GAKVRRNTYINLLQACIDSNSI-HLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDD 109
            G K       +L+ AC  S S+     ++H F+     + DV+V T +L +Y   G +  
Sbjct: 168  GIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSC 227

Query: 110  AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
            +R+VFE+M +RN+ +W++++  YS      EV++++                        
Sbjct: 228  SRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY------------------------ 263

Query: 170  CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
              D   G+ +   V+K G+     V NS++++    G + +A   F+ M E+D ++WNS+
Sbjct: 264  -KDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSI 322

Query: 230  ISGYFQIGENDEAHRLFDKMCREE-------------------------------IKLG- 257
             + Y Q G  +E+ R+F  M R                                 +K+G 
Sbjct: 323  AAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF 382

Query: 258  ---VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
               V   N L+R Y   G+   A  + K+M     T D+ +W  +++ F  +GR+  AL 
Sbjct: 383  DSVVCVCNTLLRMYAGAGRSVEANLVFKQMP----TKDLISWNSLMASFVNDGRSLDALG 438

Query: 315  LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
            L   M   G   N VT TSA++AC        G  +H L V  G   + ++GN+L++MY 
Sbjct: 439  LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYG 498

Query: 375  KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-- 432
            K  E+  + RV   +  +DV +WN++I GY +     KA   F  M+   V  N IT   
Sbjct: 499  KIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVS 558

Query: 433  ----------------------------------NVLISGYIQNGNEDEAVDLFQRMGKN 458
                                              N LI+ Y + G+   + DLF     N
Sbjct: 559  VLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLF-----N 613

Query: 459  DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
                RN  +WN+++A     G     L +  KM+S     +  +    L A A L    +
Sbjct: 614  GLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEE 673

Query: 519  VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
             +++HG  ++   E    + N+  D Y+K G I     +     ++ + +WN LI     
Sbjct: 674  GQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGR 733

Query: 579  HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
            HG++      F +M   G+KP   TF+S++ A S  G+VD G   +  I   + + P IE
Sbjct: 734  HGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIE 793

Query: 639  HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
            H   +IDL GRSG+L EA  FI  MP++P+  +W +LL +C+IHGN+D    A E L  L
Sbjct: 794  HCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKL 853

Query: 699  EPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS 758
            EP D  +  L   ++A  G+ ED   VRK       +      W+++K+ V +F  G  +
Sbjct: 854  EPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRT 913

Query: 759  ESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSS 813
               +  +Y+ L+++ + +      A +S +    +EE+KE     HSE+LALA+AL+ + 
Sbjct: 914  HPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTP 973

Query: 814  QAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +   T+RI KN+R+C  CH   K+VS +    I L D    HHF+ G CSC DYW
Sbjct: 974  EGS-TVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 232/502 (46%), Gaps = 38/502 (7%)

Query: 217 SMDEKDGVA---WNSMISGYFQIGEN----DEAHRLFDKMC-REEIKLGVVTFNILIRSY 268
           +M EK G     WN  IS + QIG +    +   R    +C +  ++L V+  N LI  Y
Sbjct: 58  AMFEKSGRKKNHWNPEISCFDQIGFSQITIETTGRAVHALCVKGLVRLSVLHTNTLINMY 117

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
            + G+   A  +   M       +  +W  M+SG  + G   + ++ F++M  +G+ P+ 
Sbjct: 118 TKFGRVKPARHLFDIMP----VRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSS 173

Query: 329 VTITSAISACTDLKAL-AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             I S ++AC    ++   G+++H    K G   DV V  +++++Y     +  + +VF+
Sbjct: 174 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 233

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFI----------KMQESDVPPNVITWNVLIS 437
            + D++V SW S++ GY   G   +  +++           ++ +S +   +   N LIS
Sbjct: 234 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDESLGRQIIGQVVKSGLESKLAVENSLIS 293

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
                GN D A  +F +M +     R+T SWNS+ A Y Q G    +  +F  M+     
Sbjct: 294 MLGSMGNVDYANYIFDQMSE-----RDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 348

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
            N  T+ ++L    ++      + IHG V++   +S + V N+L+  YA +G  V +  +
Sbjct: 349 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 408

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           F  M +KD+I+WNSL+  +V  G    AL L   M S G   N  TF S + A       
Sbjct: 409 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 468

Query: 618 DLGK----KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           + G+     V  S     QII      +A++ +YG+ G++ E+   +  MP   D   W 
Sbjct: 469 EKGRILHGLVVVSGLFYNQIIG-----NALVSMYGKIGEMSESRRVLLQMP-RRDVVAWN 522

Query: 674 ALLTACRIHGNIDLAVLAIERL 695
           AL+       + D A+ A + +
Sbjct: 523 ALIGGYAEDEDPDKALAAFQTM 544



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/461 (23%), Positives = 203/461 (44%), Gaps = 41/461 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NG + E+  +   +     +V   T   LL      +     R +H  +  +  +  V V
Sbjct: 329 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 388

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              LL +YA  G   +A  VF+ M  ++L +W++++ ++  D R  + + L   M+  G 
Sbjct: 389 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 448

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             +   F   L AC     FE G+++H LV+  G+   + + N+++++Y K G++  +RR
Sbjct: 449 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 508

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------ 261
               M  +D VAWN++I GY +  + D+A   F  M  E +    +T             
Sbjct: 509 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 568

Query: 262 ------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                   N LI  Y + G    + ++   +++     ++ TW 
Sbjct: 569 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDN----RNIITWN 624

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            M++  A +G   + L L  +M   GV  +  + +  +SA   L  L  G ++H LAVK+
Sbjct: 625 AMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL 684

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           GF  D  + N+  +MYSKC E+    ++     ++ + SWN +I+   + GY  +    F
Sbjct: 685 GFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATF 744

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
            +M E  + P  +T+  L++     G  D+ +  +  + ++
Sbjct: 745 HEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARD 785


>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  360 bits (925), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 205/584 (35%), Positives = 318/584 (54%), Gaps = 17/584 (2%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            P+VF W  +I G  +N +  +A+  +  M  +   PN  T  +   AC+  +A+  G +
Sbjct: 95  NPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQ 153

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           IH   VK G   DV + ++ I+MY+    LE A ++F    + DV  WN+MI GY + G 
Sbjct: 154 IHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMF-YSGESDVVCWNTMIDGYLKCGV 212

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
              A  LF +M       N+ +WNV+I+G  + GN  +A  LF  M + D++     SW+
Sbjct: 213 LEAAKGLFAQMPVK----NIGSWNVMINGLAKGGNLGDARKLFDEMSERDEI-----SWS 263

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           S++ GY   G+   AL +F++MQ     P    + SVL AC+ + A ++ + +H  + R 
Sbjct: 264 SMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRN 323

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
           S++    +  +L+D YAK G +     +F+ M  ++I TWN++I G  +HG    AL+LF
Sbjct: 324 SIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELF 383

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            +++   +KPN  T + ++ A + AG VD G ++F ++ E Y + P +EHY  M+DL GR
Sbjct: 384 SKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGR 443

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           SG   EA + I  MP++P++++W ALL ACRIHGN DLA    + L +LEP +     L+
Sbjct: 444 SGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLL 503

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             IYA  G+ +D  K+RKL ++   +   G   +++   V+ F  G  S      +Y  L
Sbjct: 504 SNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKL 563

Query: 770 QNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
           + + E +     +  +S     I+EEEKE     HSEKLA+AF LI +      I IVKN
Sbjct: 564 KIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKR-IHIVKN 622

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +R+C  CH   K +S +   EI + D    HHFKNG CSC D+W
Sbjct: 623 LRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 203/409 (49%), Gaps = 20/409 (4%)

Query: 53  AKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI----DVFVKTKLLSVYAKC--GC 106
           +K+ + T + L     DS SI   + L     LV       D +V   LL  YA      
Sbjct: 27  SKLPQKTVLKLF----DSKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSN 82

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
            D A +VF  +   N++ W+ +I     + +  + +  +  MV D   P+ F +P + +A
Sbjct: 83  FDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDAR-PNKFTYPTLFKA 141

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C      + G+ +H  V+K G+     ++++ + +Y   G+L  AR+ F S  E D V W
Sbjct: 142 CSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYS-GESDVVCW 200

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
           N+MI GY + G  + A  LF +M  + I     ++N++I    + G    A ++   M  
Sbjct: 201 NTMIDGYLKCGVLEAAKGLFAQMPVKNIG----SWNVMINGLAKGGNLGDARKLFDEMSE 256

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
                D  +W+ M+ G+   GR  +AL++F++M      P    ++S ++AC+++ A+  
Sbjct: 257 R----DEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQ 312

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G  +H+   +     D ++G +L++MY+KC  L+    VF+ +K++++++WN+MI G   
Sbjct: 313 GRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAI 372

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
            G    A ELF K+QE  + PN IT   +++     G  D+ + +FQ M
Sbjct: 373 HGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTM 421



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 149/302 (49%), Gaps = 11/302 (3%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           +++  AK G L DAR++F++M ER+  +WS+M+  Y    R++E +E+F  M ++   P 
Sbjct: 234 MINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPG 293

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            F+   +L AC N G  + G+ +H+ + +  +     +  ++L +Y KCG+L      FE
Sbjct: 294 RFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFE 353

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            M E++   WN+MI G    G  ++A  LF K+    +K   +T   ++ +    G  D 
Sbjct: 354 EMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDK 413

Query: 277 AMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            + + + M E  G+ P++  + CM+    ++G  S+A DL   M    + PN     + +
Sbjct: 414 GLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMP---MKPNAAVWGALL 470

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDD---VLVGNSLINMYSKCEELEAAERVFDMIKDK 392
            AC       +   +  + +++   +    VL    L N+Y+K    +   ++  ++KD+
Sbjct: 471 GACRIHGNFDLAERVGKILLELEPQNSGRYVL----LSNIYAKVGRFDDVSKIRKLMKDR 526

Query: 393 DV 394
            +
Sbjct: 527 GI 528



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 181/465 (38%), Gaps = 130/465 (27%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           N +L +AI     +    A+  + TY  L +AC  + ++   R++H   +      DV +
Sbjct: 111 NNKLFKAIYFYGRMVID-ARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           K+  + +YA  G L+DAR++F    E ++  W+ MI  Y +                   
Sbjct: 170 KSAGIHMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLK------------------- 209

Query: 154 FPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
                           CG  EA K L   + +K   S      N ++    K G L  AR
Sbjct: 210 ----------------CGVLEAAKGLFAQMPVKNIGSW-----NVMINGLAKGGNLGDAR 248

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE------------------- 253
           + F+ M E+D ++W+SM+ GY   G   EA  +F +M REE                   
Sbjct: 249 KLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIG 308

Query: 254 ----------------IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                           IKL  V    L+  Y + G+ D+  E+ + M+      ++FTW 
Sbjct: 309 AIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKER----EIFTWN 364

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            MI G A +GR   AL+LF ++    + PNG+T+   ++AC                   
Sbjct: 365 AMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACA----------------HA 408

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIK-----DKDVYSWNSMIAGYCQAGYCGK 412
           GF D  L                   R+F  ++     D ++  +  M+    ++G   +
Sbjct: 409 GFVDKGL-------------------RIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSE 449

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
           A +L   M    + PN   W  L+     +GN     DL +R+GK
Sbjct: 450 AEDLINSMP---MKPNAAVWGALLGACRIHGN----FDLAERVGK 487



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 181/397 (45%), Gaps = 38/397 (9%)

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCE--ELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           ++H L ++ G   D  V  +L+  Y+       + A +VF  I + +V+ WN +I G  +
Sbjct: 51  QLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVL-----ISGYIQNGNEDEAVDLFQRMGKNDKV 461
                KA   + +M   D  PN  T+  L     ++  +Q G +     +   +G +  +
Sbjct: 111 NNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
           K      ++ I  Y   G+  +A  +F   +S     N  T++     C  L A+     
Sbjct: 170 K------SAGIHMYASFGRLEDARKMFYSGESDVVCWN--TMIDGYLKCGVLEAA----- 216

Query: 522 IHGCVLRRSLESSLPVM-----NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
                  + L + +PV      N +I+  AK GN+  +R +FD MS +D I+W+S++ GY
Sbjct: 217 -------KGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGY 269

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
           +  G +  AL++F QM+    +P R    S++ A S  G +D G+ V   +      +  
Sbjct: 270 ISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDA 329

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF 696
           +   +A++D+Y + G+L+   E  E+M  E +   W A++    IHG  + A+    +L 
Sbjct: 330 VLG-TALLDMYAKCGRLDMGWEVFEEMK-EREIFTWNAMIGGLAIHGRAEDALELFSKLQ 387

Query: 697 D--LEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
           +  ++P  + +   +L   A  G  +  L++ +  RE
Sbjct: 388 EGRMKPNGITLVG-VLTACAHAGFVDKGLRIFQTMRE 423



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 173/397 (43%), Gaps = 17/397 (4%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT- 87
           +D     GR  EA+ +   +  +  +  R    ++L AC +  +I   R +HA+L   + 
Sbjct: 266 VDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSI 325

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           ++D  + T LL +YAKCG LD   EVFE+M+ER ++TW+AMIG  +   R  + +ELF  
Sbjct: 326 KLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSK 385

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           + +  + P+      +L AC + G  + G ++  ++    G+         ++ +  + G
Sbjct: 386 LQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSG 445

Query: 207 KLIWARRFFESMDEKDGVA-WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
               A     SM  K   A W +++      G  D A R+  K+  E        + +L 
Sbjct: 446 LFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERV-GKILLELEPQNSGRYVLLS 504

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ-----NGRTSQALDLFKEMS 320
             Y ++G+ D   ++ K M+  GI          ++G        +G   Q  ++++++ 
Sbjct: 505 NIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLK 564

Query: 321 FVG---VMPNGVTITSAISACTDLKALAMGMEIHS--LAVKMGFTDDVLVGNS--LINMY 373
            +     M      TS +    D +     +  HS  LA+  G   + L G    ++   
Sbjct: 565 IIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLI-NTLPGKRIHIVKNL 623

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
             C++  +A ++   I D+++   + +   + + G C
Sbjct: 624 RVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTC 660


>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 226/724 (31%), Positives = 364/724 (50%), Gaps = 86/724 (11%)

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD  L P   ++C         + +H++    G++    V +S+L  Y++ G    AR  
Sbjct: 18  PDPHLLPTAFKSCPT---LPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARAL 74

Query: 215 FESMD--EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           F+ M   ++  V W+++++ +   G+ + A RL ++M R+                    
Sbjct: 75  FDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDG------------------- 115

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM-PNGVTI 331
                          G+ P+V TW  ++SG  ++GR   A+     M   G++ P+   +
Sbjct: 116 ---------------GVEPNVITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGV 160

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           + A+SA  D+  +++G ++H  AVK G   D  V  +LI+MY KC +     RVFD    
Sbjct: 161 SCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSH 220

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
            D                                   V + N LI+G  +N    EA+ L
Sbjct: 221 MD-----------------------------------VASCNALIAGLSRNAQVCEALRL 245

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           F+    +  V+ N  SW S++A   Q G+   A+  FR+MQ+    PN VTI  VLPA A
Sbjct: 246 FKEF-VDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFA 304

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
            + A    +  H   LR+     + V ++L+D YAK G +  +R IFD M S+++++WN+
Sbjct: 305 NVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNA 364

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
           +I GY ++G    A+ +F  M     KP+  TF  ++ A + AG+ + G+  F  +   Y
Sbjct: 365 MIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEY 424

Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
            + P +EHY+ M+ L GR+GKL+EA + I DMP EPD+ IW +LL +CR+HGN+DLA +A
Sbjct: 425 GVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVA 484

Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
            E+LF LEP +     L+  IYA     +   +VR++ ++   +   G  WIE+KN V+ 
Sbjct: 485 AEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHM 544

Query: 752 FVTGGWSESYSDLLYSWLQNVPENVTAR------SSHSGLC-IEEEEKEEISGIHSEKLA 804
            + G  S      +   +  +  N+  R      S+   L  +EE+EK++I  +HSEKLA
Sbjct: 545 LLAGDDSHPMMTAIIEKINQL--NIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLA 602

Query: 805 LAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
           +A  LI +S    T+R++KN+R+C  CHE  K++S     EI + D+   HHF  G+CSC
Sbjct: 603 VALGLISTSPGT-TLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSC 661

Query: 865 GDYW 868
           GD+W
Sbjct: 662 GDFW 665



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 201/483 (41%), Gaps = 86/483 (17%)

Query: 72  SIHLARKLHAFLNLVTEI-----DVFVKTKLLSVYAKCGCLDDAREVF------------ 114
           ++ LAR LHA    V E+     D FV + LL  Y + G   +AR +F            
Sbjct: 32  TLPLARALHA----VAEVSGLARDPFVASSLLHAYLRLGTTGNARALFDGMPRPQRTVVG 87

Query: 115 ---------------------EDMR-----ERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
                                E+MR     E N+ TW+ ++   +R  R R+ V     M
Sbjct: 88  WSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRSGRARDAVVALATM 147

Query: 149 VQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
             +GL  PD       L A G+ G    G+ +H   +K G      V  +++ +Y KCG+
Sbjct: 148 HGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQ 207

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
                R F+     D  + N++I+G  +  +  EA RLF +     ++L VV++  ++  
Sbjct: 208 AAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVAC 267

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
             Q G+   A+E  + M++ G  P+  T  C++  FA                       
Sbjct: 268 CVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFA----------------------- 304

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
                       ++ AL  G   H  A++ GF  DV V ++L++MY+KC  ++ A  +FD
Sbjct: 305 ------------NVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFD 352

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
            +  ++V SWN+MI GY   G    A  +F  M +    P+++T+  L++   Q G  +E
Sbjct: 353 TMVSRNVVSWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEE 412

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
               F+ M     V      +  ++    + G+ + A  +   M    F P+     S+L
Sbjct: 413 GRHYFKEMHNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMP---FEPDAYIWGSLL 469

Query: 508 PAC 510
            +C
Sbjct: 470 GSC 472



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 173/402 (43%), Gaps = 56/402 (13%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYIN-LLQACIDSNSIHLARKLHAF-LNLVTEIDVF 92
           +GR  +A+  L ++  +G      T ++  L A  D   + + ++LH + +      D  
Sbjct: 134 SGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADAC 193

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR--------------- 137
           V T L+ +Y KCG   +   VF++    ++ + +A+I   SR+ +               
Sbjct: 194 VVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRG 253

Query: 138 -------WR-------------EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
                  W              E VE F  M   G  P+    P +L A  N      G+
Sbjct: 254 VELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGR 313

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
             H   ++ G      V ++++ +Y KCG++  AR  F++M  ++ V+WN+MI GY   G
Sbjct: 314 SAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGGYAMYG 373

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTW 296
           E   A  +F  M + + K  +VTF  L+ +  Q G  +      K M +  G++P +  +
Sbjct: 374 EAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSPRMEHY 433

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC-----TDLKALAMGMEIH 351
            CM++   + G+  +A DL  +M F    P+     S + +C      DL  +A      
Sbjct: 434 ACMVTLLGRAGKLDEAYDLISDMPF---EPDAYIWGSLLGSCRVHGNVDLAEVA------ 484

Query: 352 SLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDMIKD 391
             A K+   +    GN ++  N+Y+  +  +   RV +M+KD
Sbjct: 485 --AEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKD 524



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 95/416 (22%), Positives = 163/416 (39%), Gaps = 91/416 (21%)

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           +  V   P+   + +A  +C     L +   +H++A   G   D  V +SL++ Y +   
Sbjct: 11  LRHVSFPPDPHLLPTAFKSC---PTLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGT 67

Query: 379 LEAAERVFDMI--KDKDVYSWNSMIAGYCQAGYCGKAYELFIKM-QESDVPPNVITWNVL 435
              A  +FD +    + V  W++++A +   G    A+ L  +M ++  V PNVITWN L
Sbjct: 68  TGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGL 127

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           +SG  ++G   +AV     M                           +  G+ R      
Sbjct: 128 VSGLNRSGRARDAVVALATM---------------------------HGEGLLR------ 154

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
             P+   +   L A   +   +  +++HG  ++    +   V+ +LID Y K G      
Sbjct: 155 --PDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGCRADACVVTALIDMYGKCGQAAEVV 212

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            +FD  S  D+ + N+LI G   +     AL LF +    G++ N  ++ SI+       
Sbjct: 213 RVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRGVELNVVSWTSIVAC----- 267

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP---IEPDSSIW 672
                         C Q                 +GK  EA+EF  +M     EP+S   
Sbjct: 268 --------------CVQ-----------------NGKDLEAVEFFREMQAQGTEPNS--- 293

Query: 673 EALLTACRIHGNIDLAVLAIER---LFDLEPG---DVLIQRLILQIYAICGKPEDA 722
             +   C +    ++A L   R    F L  G   DV +   ++ +YA CG+ +DA
Sbjct: 294 --VTIPCVLPAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDA 347


>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 226/771 (29%), Positives = 383/771 (49%), Gaps = 58/771 (7%)

Query: 51  QGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VFVKTKLLSVYAKCGCLD 108
           Q    ++ T+ ++ Q C D  ++   ++ HA + ++TE    VFV   L+ +Y KC  L+
Sbjct: 36  QATPTKKKTFSHIFQECSDRKALCPGKQAHARM-ILTEFKPTVFVTNCLIQMYIKCSDLE 94

Query: 109 DAREVFEDMRERNLYTWSAM-------------------------------IGAYSRDQR 137
            A +VF+ M +R+  +W+AM                               I  Y  +  
Sbjct: 95  FAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGD 154

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
            R+V+++F  M + G   D   F  +L++C +  D   G  +H L +K+G  C     ++
Sbjct: 155 HRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSA 214

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           +L +Y KC KL  + +FF SM EK+ V+W+++I+G  Q  +      LF +M +  + + 
Sbjct: 215 LLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVS 274

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
             TF  + RS   L    +  ++           DV   T  +  + +    S A  LF 
Sbjct: 275 QSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFN 334

Query: 318 EM-----------------SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
            +                 S  G+  + V+++ A  AC  +K    G+++H L++K    
Sbjct: 335 SLPNHNLQSYNAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQ 394

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI-- 418
            ++ V N++++MY KC  L  A  VF+ +  +D  SWN++IA + Q G   K   LFI  
Sbjct: 395 SNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHN 454

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
           ++ +S +  +      LI  Y + G  ++A  L  R+      ++   SWN++I+G+   
Sbjct: 455 RIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLA-----EQTVVSWNAIISGFSLQ 509

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
            Q   A   F KM      P+  T  ++L  CA LV     K+IH  ++++ L+S   + 
Sbjct: 510 KQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYIS 569

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           ++L+D Y+K GN+   + IF+   ++D +TWN+++CGY  HG    AL +F+ M+   +K
Sbjct: 570 STLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVK 629

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           PN  TFL+++ A    G+V+ G   F S+   Y + P +EHYS ++D+ GRSG++ +A+E
Sbjct: 630 PNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALE 689

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
            IE MP E D+ IW  LL+ C+IHGN+++A  A   +  LEP D     L+  IYA  G 
Sbjct: 690 LIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGM 749

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             +  K+RK+ R N  +   G  WIE+K+ V+ F+ G  +   S  +Y  L
Sbjct: 750 WNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENL 800



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 228/480 (47%), Gaps = 26/480 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N  L   + +   +   G  V ++T+ ++ ++C   +++ L  +LH   L      DV +
Sbjct: 253 NDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVI 312

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T  L +Y KC  L DA+++F  +   NL +++A+I  Y+R  +              GL
Sbjct: 313 GTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDK--------------GL 358

Query: 154 FPDDFLFPKILQACGNC-GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             D+       +AC    GD E G  +H L +K        V N++L +Y KCG L+ A 
Sbjct: 359 GLDEVSLSGAFRACAVIKGDLE-GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEAC 417

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF--DKMCREEIKLGVVTFNILIRSYNQ 270
             FE M  +D V+WN++I+ + Q G  ++   LF  +++ +  + L       LI  Y++
Sbjct: 418 LVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSK 477

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G     ME  +++        V +W  +ISGF+   ++ +A   F +M  +GV P+  T
Sbjct: 478 CGM----MEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFT 533

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
             + +  C +L  + +G +IH+  +K     D  + ++L++MYSKC  ++  + +F+   
Sbjct: 534 YATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 593

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
           ++D  +WN+M+ GY Q G   +A ++F  MQ  +V PN  T+  ++      G  ++ + 
Sbjct: 594 NRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLH 653

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            F  M  N  +      ++ ++    + GQ + AL +   M    F  + V   ++L  C
Sbjct: 654 YFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMP---FEADAVIWRTLLSIC 710


>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 220/718 (30%), Positives = 368/718 (51%), Gaps = 80/718 (11%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           +LLQ C  S   HL++++H+ + +  +    F+  +++SVYA  G + DA+ VFE     
Sbjct: 39  DLLQQCSKS---HLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIE 95

Query: 121 ---NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
              NL  W++++ A        E +E++  M + G+  D F FP +++AC   G  +  +
Sbjct: 96  CFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCR 155

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H  V+++G      V N ++ +Y K G++                             
Sbjct: 156 SVHGHVVEMGFQWNLHVGNELMGMYGKIGRM----------------------------- 186

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
             D+A ++F++M         V++N ++  Y     C  A EM + M S G+ P++ TWT
Sbjct: 187 --DDARKVFERMAVRS----CVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWT 240

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            ++S  A+ G+  + ++LF  M   G+      +   +S   DL A   G  IH   VK 
Sbjct: 241 SLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKG 300

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           GF + + V NSLI +Y K   + AA  +F  IK K                         
Sbjct: 301 GFENYLFVKNSLICLYGKHGNVNAARILFLEIKTK------------------------- 335

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDK---VKRNTASWNSLIAG 474
                     N+++WN LIS Y   G  DEA  +F ++ K D+   V+ N  SW+++I G
Sbjct: 336 ----------NIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGG 385

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS 534
           +   GQ   AL +FR+MQ +    N VTI SVL  CA L A +  +EIHG V+R  ++ +
Sbjct: 386 FASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGN 445

Query: 535 LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
           + V N LI+ Y KSG+      +F+ + +KD+I+WN+++ GY +HG    A+  FDQM  
Sbjct: 446 ILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIK 505

Query: 595 FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLE 654
            G +P+  TF++++ A S AG+V  G+++F  + + +++ P +EHY+ M+DL GR+G L+
Sbjct: 506 DGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQ 565

Query: 655 EAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYA 714
           EA + ++ MP+EP++ +W ALL +CR+H N ++A     ++F+L         L+  IYA
Sbjct: 566 EASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYA 625

Query: 715 ICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
             G+ ED+ KVR   +    + + GQ WI+VK  VY F  G    +  + +Y  L+++
Sbjct: 626 ASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDL 683



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 229/516 (44%), Gaps = 78/516 (15%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           +G   EA+ +   +   G      T+  +++AC    S  L R +H   + +  + ++ V
Sbjct: 113 HGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHV 172

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
             +L+ +Y K G +DDAR+VFE M  R+  +W+ M+  Y+ +       E+F +M   GL
Sbjct: 173 GNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGL 232

Query: 154 FPDDFLFPKILQACGNCGD-----------------------------------FEAGKL 178
            P+   +  +L +   CG                                    F+ GK+
Sbjct: 233 EPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKV 292

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H  V+K G      V+NS++ +Y K G +  AR  F  +  K+ V+WN+          
Sbjct: 293 IHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNA---------- 342

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG----ITPDVF 294
                                    LI SY  LG CD A  +  ++E       + P+V 
Sbjct: 343 -------------------------LISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVV 377

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +W+ +I GFA  G+  +AL+LF+ M    V  N VTI S +S C +L AL +G EIH   
Sbjct: 378 SWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHV 437

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           V+     ++LVGN LINMY+K    +    VF+ I++KD+ SWN+M+AGY   G    A 
Sbjct: 438 VRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAI 497

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
             F +M +    P+ +T+  ++S     G   E  +LF +M K  +V+     +  ++  
Sbjct: 498 RTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDL 557

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             + G    A  V + M      PN     ++L +C
Sbjct: 558 LGRAGLLQEASKVVKSMPVE---PNACVWGALLNSC 590


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 275/936 (29%), Positives = 442/936 (47%), Gaps = 118/936 (12%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRNT---YINLLQACIDSNS--IHLARKLHAFLN-LVTE 88
            +G  +EA  V  ++  +G++  R T   + ++L+AC D+    +  A ++H  ++  +  
Sbjct: 135  SGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYA 194

Query: 89   IDVFVKTKLLSVYAKC--GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
             +  V   L+S+Y  C  G    A++VF+    R+L TW+A++  Y++         LF 
Sbjct: 195  SNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFM 254

Query: 147  LMVQDG----LFPDDFLFPKILQACGNCGDFEAGKL--MHSLVIKLGMSCVRRVRNSVLA 200
             M+ D     L P++  F  ++ A  +     +G L  + + V+K G S    V +++++
Sbjct: 255  AMLHDDSAIELRPNEHTFGSLITAT-SLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVS 313

Query: 201  VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF-------------- 246
             + + G L  A+  F ++ E++ V  N +I G  +   ++EA  +F              
Sbjct: 314  AFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTF 373

Query: 247  --------------DKMCREE-----------IKLGVVTFNILIRSYNQLGQCDVAMEMV 281
                          D + R             I L +   N L+  Y + G  D A    
Sbjct: 374  VVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKA---- 429

Query: 282  KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
             R+  L    D  +W  +IS   QNG    A+  +  M    + P+     S +S+C  L
Sbjct: 430  SRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASL 489

Query: 342  KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
            + L  G ++H  AVK G   D  V N+L+ MY  C     +  +F+ + + D+ SWNS++
Sbjct: 490  RLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIM 549

Query: 402  AGYCQA-GYCGKAYELFIKMQESDVPPNVITW---------------------------- 432
                 +     ++ E+F  M  S + PN +T+                            
Sbjct: 550  GVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGA 609

Query: 433  -------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL 485
                   N L+S Y ++G+ D    LF  M      +R+  SWNS+I+GY   G     +
Sbjct: 610  IEDNAVDNALMSCYAKSGDMDSCEQLFSSMSG----RRDAVSWNSMISGYIYNGHLQETM 665

Query: 486  GVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
                 M  S    +C T   VL ACA + A  +  E+H   +R  LES + V ++L+D Y
Sbjct: 666  DCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMY 725

Query: 546  AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
            +K G I Y+  +F+ MS K+  +WNS+I GY  HG    AL++F++M+  G  P+  TF+
Sbjct: 726  SKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFV 785

Query: 606  SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
            S++ A S AG+VD G   F  + E + I+P IEHYS +IDL GR+GKL +  E+I  MP+
Sbjct: 786  SVLSACSHAGLVDRGLDYF-EMMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYINRMPM 844

Query: 666  EPDSSIWEALLTACRIHGN---IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDA 722
            +P++ IW  +L ACR   +   IDL   A   L +LEP + +   L    YA  G+ ED 
Sbjct: 845  KPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGRWEDT 904

Query: 723  LKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSH 782
             K R        +   GQ W+ + + V+TF+ G  S   +  +Y  L  + + +     +
Sbjct: 905  AKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNFLIQKI----KN 960

Query: 783  SGLCIEEE---------EKEEISGIHSEKLALAFALI-GSSQAPHTIRIVKNIRMCVHCH 832
            +G     E          KEE+   HSEKLA+AF L   SS  P  IRI+KN+R+C  CH
Sbjct: 961  AGYVPMTEFALYDLEEENKEELLSYHSEKLAVAFVLTRSSSDVP--IRIMKNLRVCGDCH 1018

Query: 833  ETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
               +Y+S +   +I L DS   HHF++G+CSCGDYW
Sbjct: 1019 TAFRYISQIVCRQIILRDSIRFHHFEDGKCSCGDYW 1054



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 181/731 (24%), Positives = 319/731 (43%), Gaps = 134/731 (18%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D+F+   L+++YAK   L  AR+VF+ M ERN  +W+ ++  Y       E   +F  M+
Sbjct: 90  DLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVSGYVLSGITDEAFRVFKAML 149

Query: 150 QDG---LFPDDFLFPKILQACGNCG-DFEAGKL-MHSLVIKLGMSCVRRVRNSVLAVYVK 204
            +G     P  F F  +L+AC + G D  A  + +H LV K   +    V N+++++Y  
Sbjct: 150 WEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGN 209

Query: 205 C--GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE----EIKLGV 258
           C  G  + A++ F++   +D + WN+++S Y + G       LF  M  +    E++   
Sbjct: 210 CSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNE 269

Query: 259 VTFNILIRSYNQLGQCDVAM--EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 316
            TF  LI +   L  C   +  ++  R+   G + D++  + ++S FA++G   +A D+F
Sbjct: 270 HTFGSLITA-TSLSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIF 328

Query: 317 KEMS--------------------------FVGV----MPNGVTITSAISACTDLK---- 342
             +                           F+G     + N  T    +SA  +      
Sbjct: 329 INLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFVVNTDTFVVLLSAVAEFSIPED 388

Query: 343 ALAMGMEIHSLAVKMGFTD-DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
            L  G E+H   ++ G  D  + + N L+NMY+KC  ++ A RVF ++  +D  SWN++I
Sbjct: 389 GLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASRVFRLLCARDRVSWNTII 448

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPP--------------------------NVITW--- 432
           +   Q G+C  A   +  M++  + P                          + + W   
Sbjct: 449 SVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLD 508

Query: 433 ------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA-GYQQLGQKNNAL 485
                 N L+  Y   G   E+ ++F  M ++D V     SWNS++            ++
Sbjct: 509 LDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIV-----SWNSIMGVMVSSHAPTAESV 563

Query: 486 GVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
            VF  M  S   PN VT +++L A + L      K++H  VL+        V N+L+  Y
Sbjct: 564 EVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCY 623

Query: 546 AKSGNIVYSRTIFDGMSS-KDIITWNSLICGYVLHGFWH--------------------- 583
           AKSG++     +F  MS  +D ++WNS+I GY+ +G                        
Sbjct: 624 AKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCTF 683

Query: 584 ----------AALDLFDQMKSFGLKPNRGTFL----SIILAHSLAGMVDLGKKVFCSITE 629
                     AAL+   +M +FG++    + +    +++  +S  G +D   KVF S+++
Sbjct: 684 SIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQ 743

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE---PDSSIWEALLTACRIHGNID 686
             +       +++MI  Y R G  E+A+E  E+M      PD   + ++L+AC   G +D
Sbjct: 744 KNEF-----SWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVD 798

Query: 687 LAVLAIERLFD 697
             +   E + D
Sbjct: 799 RGLDYFEMMED 809



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 174/770 (22%), Positives = 334/770 (43%), Gaps = 141/770 (18%)

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
           G+  A + +H  ++K G++    + N ++ +Y K  +L  AR+ F+ M E++ V+W  ++
Sbjct: 70  GEEAAPERLHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLV 129

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLG---VVTFNILIRS-------------------- 267
           SGY   G  DEA R+F  M  E  +       TF  ++R+                    
Sbjct: 130 SGYVLSGITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVS 189

Query: 268 --------------YNQLGQCDVAMEMVKRMESLGITP--DVFTWTCMISGFAQNGRTSQ 311
                          +  G C V + + +  +    TP  D+ TW  ++S +A+ G    
Sbjct: 190 KTIYASNTTVCNALISMYGNCSVGLPL-QAQQVFDTTPVRDLITWNALMSVYAKKGYVVS 248

Query: 312 ALDLFKEM----SFVGVMPNGVTITSAISACTDLKALAMGM--EIHSLAVKMGFTDDVLV 365
              LF  M    S + + PN  T  S I+A T L + + G+  ++ +  +K G + D+ V
Sbjct: 249 TFTLFMAMLHDDSAIELRPNEHTFGSLITA-TSLSSCSSGVLDQVFARVLKSGSSSDLYV 307

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
           G++L++ +++   L+ A+ +F  +K+++  + N +I G  +     +A  +F+  ++S V
Sbjct: 308 GSALVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRDSFV 367

Query: 426 PPNVITWNVLISGY---------IQNGNE------------------DEAVDLFQRMGKN 458
             N  T+ VL+S           +  G E                  +  V+++ + G  
Sbjct: 368 -VNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAI 426

Query: 459 DKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           DK          R+  SWN++I+   Q G    A+  +  M+  C  P+    +S L +C
Sbjct: 427 DKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSC 486

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
           A L      +++H   ++  L+    V N+L+  Y   G    S  IF+ M+  DI++WN
Sbjct: 487 ASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWN 546

Query: 571 SLICGYV-LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
           S++   V  H     ++++F  M   GL PN+ TF++++ A S   +++LGK+V   + +
Sbjct: 547 SIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLK 606

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID--- 686
            +  I      +A++  Y +SG ++   +    M    D+  W ++++    +G++    
Sbjct: 607 -HGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETM 665

Query: 687 -------------------------LAVLAIERLFDLEP--------GDVLIQRLILQIY 713
                                     +V A+ER  ++           DV+++  +L +Y
Sbjct: 666 DCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMY 725

Query: 714 AICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN-- 771
           + CG+ + A KV       +++N F   W    +++  +   G  E   ++     +N  
Sbjct: 726 SKCGRIDYASKVFN---SMSQKNEFS--W---NSMISGYARHGLGEKALEIFEEMQRNGA 777

Query: 772 VPENVTARS-----SHSGLC---IEEEEKEEISGI--HSEKLALAFALIG 811
            P++VT  S     SH+GL    ++  E  E  GI  H E  +    L+G
Sbjct: 778 CPDHVTFVSVLSACSHAGLVDRGLDYFEMMEDHGILPHIEHYSCVIDLLG 827


>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
          Length = 643

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 209/564 (37%), Positives = 310/564 (54%), Gaps = 37/564 (6%)

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
           +T    I AC +      G+ +H+  VK GF  D  + NSLI++Y+  ++L AA+++F +
Sbjct: 1   MTYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSL 60

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
             D+DV SWN+MI GY + G  G    +F +M    V  +VI+WN +I+GY   G  DEA
Sbjct: 61  CSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRM----VCRDVISWNTIINGYAIVGKIDEA 116

Query: 449 VDLFQRMGKNDKVK--------------------------RNTASWNSLIAGYQQLGQKN 482
             LF  M + + V                           R+  SWNS++A Y Q G+ N
Sbjct: 117 KRLFDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPN 176

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
            AL +F +M++    P   T++S+L ACA+L A +K   +H  +    +E +  V  +L+
Sbjct: 177 EALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALV 236

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
           D YAK G I  +  +F+ M SKD++ WN++I G  +HG    A  LF +MK   ++PN  
Sbjct: 237 DMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDI 296

Query: 603 TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           TF++++ A S AGMVD G+K+   ++  Y I P +EHY  +IDL  R+G LEEAME I  
Sbjct: 297 TFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGT 356

Query: 663 MPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDA 722
           MP+EP+ S   ALL  CRIHGN +L  +  +RL +L+P       L+  IYA   K +DA
Sbjct: 357 MPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDA 416

Query: 723 LKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSH 782
            KVR L + N      G   IE+K +V+ FV G WS   S+ +Y  L  +   + +   +
Sbjct: 417 RKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYDKLNEIHTRLKSAIGY 476

Query: 783 SG------LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAK 836
           S       L +EEE+KE    +HSEKLA+A+ L+    +   IRIVKN+R+C  CH   K
Sbjct: 477 SADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLL-HLDSKEAIRIVKNLRVCRDCHHVTK 535

Query: 837 YVSMMHHCEIFLADSKCLHHFKNG 860
            +S ++  EI + D    HHF++G
Sbjct: 536 LISKVYGREIIVRDRNRFHHFEDG 559



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/383 (23%), Positives = 165/383 (43%), Gaps = 50/383 (13%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           TY  +++AC +S+       +H   +    E D ++   L+ +YA    L  A+++F   
Sbjct: 2   TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLC 61

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            +R++ +W+AMI  Y +         +F  MV      D   +  I+      G  +  K
Sbjct: 62  SDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMV----CRDVISWNTIINGYAIVGKIDEAK 117

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +   + +  +       NS+L+ +VKCG +  A   F  M  +D V+WNSM++ Y Q G
Sbjct: 118 RLFDEMPERNLVS----WNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCG 173

Query: 238 ENDEAHRLFDKM------------------CRE-----------------EIKLGVVTFN 262
           + +EA  LFD+M                  C                    I++  +   
Sbjct: 174 KPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGT 233

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            L+  Y + G+  +A ++   MES     DV  W  +I+G A +G   +A  LFKEM   
Sbjct: 234 ALVDMYAKCGKISLATQVFNAMES----KDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEA 289

Query: 323 GVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
            V PN +T  + +SAC+    +  G + +  ++   G    V   + +I++ ++   LE 
Sbjct: 290 SVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEE 349

Query: 382 A-ERVFDMIKDKDVYSWNSMIAG 403
           A E +  M  + +  +  +++ G
Sbjct: 350 AMELIGTMPMEPNPSALGALLGG 372



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 100/211 (47%), Gaps = 8/211 (3%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-LVTEIDVFVK 94
           G+ NEA+ + D +   G K    T ++LL AC    ++     LH ++N    E++  V 
Sbjct: 173 GKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVG 232

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T L+ +YAKCG +  A +VF  M  +++  W+ +I   +     +E  +LF  M +  + 
Sbjct: 233 TALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVE 292

Query: 155 PDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           P+D  F  +L AC + G  + G KL+  +    G+       + V+ +  + G L  A  
Sbjct: 293 PNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAME 352

Query: 214 FFESMD-EKDGVAWNSM-----ISGYFQIGE 238
              +M  E +  A  ++     I G F++GE
Sbjct: 353 LIGTMPMEPNPSALGALLGGCRIHGNFELGE 383


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 238/765 (31%), Positives = 385/765 (50%), Gaps = 78/765 (10%)

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
           +C +  A K +H+L++  G S    +   ++ +YV  G +  +R  F+ + +K+  +WNS
Sbjct: 31  SCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNS 90

Query: 229 MISGYFQIGENDEA----HRLFDKMCREEIKLGVVTFNILIRS----------------- 267
           +IS Y + G+  EA    ++LF       ++    TF  ++++                 
Sbjct: 91  IISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCCVFKM 150

Query: 268 ---------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
                          Y++ G  DVA ++   M       DV +W  MISGF QNG  + A
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMP----VKDVGSWNAMISGFCQNGNAAGA 206

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
           L +   M   GV  + +T+ S +  C     +  G+ IH   +K G   DV V N+LINM
Sbjct: 207 LGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINM 266

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           YSK   L+ A+ VFD ++ +D+ SWNS+IA Y Q      A   F  MQ   + P+++T 
Sbjct: 267 YSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTV 326

Query: 433 NVLISGYIQNGNE-----------------------DEAVDLFQRMGK--------NDKV 461
             L S + Q  ++                       +  V+++ ++G         +   
Sbjct: 327 VSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLP 386

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQS-SCFYPNCVTILSVLPACAYLVASNKVK 520
           +++T SWN+L+ GY Q G  + A+  +  M+      PN  T +S++PA +++ A  +  
Sbjct: 387 RKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGM 446

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
           +IH  +++ SL   + V   LID Y K G +  + ++F  +     + WN++I    +HG
Sbjct: 447 KIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHG 506

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
               AL LF  M +  +K +  TF+S++ A S +G+VD G+K F  + + Y I P ++HY
Sbjct: 507 RGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHY 566

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
             M+DL GR+G LE+A E + +MPI+PD+SIW ALL+AC+I+GN +L  LA +RL +++ 
Sbjct: 567 GCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDS 626

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
            +V    L+  IYA   K E  +KVR L R+   R + G   + V +    F TG  +  
Sbjct: 627 ENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHP 686

Query: 761 YSDLLYSWLQNVPENVTARS-----SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQA 815
               +Y  L+ +   + +       S     IEE+EKE+I   HSE+LA+AF +I S+  
Sbjct: 687 KYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEKEQILNSHSERLAIAFGII-STPP 745

Query: 816 PHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNG 860
              IRI KN+R+C  CH   KY+S +   EI + DS   HHFK+G
Sbjct: 746 RSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNRFHHFKDG 790



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 158/595 (26%), Positives = 280/595 (47%), Gaps = 90/595 (15%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
           L  +C++ N+    +KLHA L +  +  ++ + TKL+++Y   G +  +R  F+ + ++N
Sbjct: 28  LFNSCVNVNA---TKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKN 84

Query: 122 LYTWSAMIGAYSRDQRWRE----VVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
           +++W+++I AY R  ++ E    V +LF +     L PD + FP IL+AC +  D   GK
Sbjct: 85  IFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GK 141

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H  V K+G      V  S++ +Y + G L  A + F  M  KD  +WN+MISG+ Q G
Sbjct: 142 KVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNG 201

Query: 238 ENDEAHRLFDKMCREEIKLGVVTF-----------------------------------N 262
               A  + ++M  E +K+  +T                                    N
Sbjct: 202 NAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSN 261

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            LI  Y++ G+   A  +  +ME      D+ +W  +I+ + QN   S AL  FK M   
Sbjct: 262 ALINMYSKFGRLQDAQMVFDQME----VRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLG 317

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD-DVLVGNSLINMYSKCEELEA 381
           G+ P+ +T+ S  S  + L    +   I    ++  + D DV++GN+L+NMY+K   +  
Sbjct: 318 GIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNC 377

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE-SDVPPNVITWNVLISGY- 439
           A  VFD +  KD  SWN+++ GY Q G   +A + +  M+E  D  PN  TW  +I  Y 
Sbjct: 378 AHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYS 437

Query: 440 ----IQNGNEDEA-----------------VDLFQRMGKND-------KVKRNTA-SWNS 470
               +Q G +  A                 +DL+ + G+ +       ++ R+T+  WN+
Sbjct: 438 HVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNA 497

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC--VLR 528
           +IA     G+   AL +F+ M +     + +T +S+L AC++   S  V E   C  +++
Sbjct: 498 IIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSH---SGLVDEGQKCFDIMQ 554

Query: 529 R--SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
           +   ++ SL     ++D   ++G +  +  +   M    D   W +L+    ++G
Sbjct: 555 KEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYG 609



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 232/517 (44%), Gaps = 52/517 (10%)

Query: 36  GRLNEAITVLDSIATQ--GAKVRRN--TYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           G+ +EA+  ++ + +   G  +R +  T+  +L+AC+   S+   +K+H     +  E D
Sbjct: 99  GKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGFEDD 155

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           VFV   L+ +Y++ G LD A +VF DM  +++ +W+AMI  + ++      + +   M  
Sbjct: 156 VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKG 215

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           +G+  D      IL  C    D   G L+H  V+K G+     V N+++ +Y K G+L  
Sbjct: 216 EGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQD 275

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC-------------------- 250
           A+  F+ M+ +D V+WNS+I+ Y Q  +   A R F  M                     
Sbjct: 276 AQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQ 335

Query: 251 ----------------REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                           RE +   VV  N L+  Y +LG  + A  +  ++       D  
Sbjct: 336 LSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPR----KDTI 391

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEIHSL 353
           +W  +++G+ QNG  S+A+D +  M      +PN  T  S I A + + AL  GM+IH+ 
Sbjct: 392 SWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAK 451

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            +K     DV V   LI++Y KC  LE A  +F  I       WN++IA     G   +A
Sbjct: 452 LIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEA 511

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            +LF  M    V  + IT+  L+S    +G  DE    F  M K   +K +   +  ++ 
Sbjct: 512 LQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVD 571

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
              + G    A  + R M      P+     ++L AC
Sbjct: 572 LLGRAGYLEKAYELVRNMP---IQPDASIWGALLSAC 605



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 197/431 (45%), Gaps = 31/431 (7%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNS------IHLARKLHAFLNL 85
            C NG    A+ VL+ +  +G K+   T  ++L  C  S+       IHL    H     
Sbjct: 197 FCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGL--- 253

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
             + DVFV   L+++Y+K G L DA+ VF+ M  R+L +W+++I AY ++      +  F
Sbjct: 254 --DSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFF 311

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK---LGMSCVRRVRNSVLAVY 202
             M   G+ PD      +        D    + +   VI+   L    V  + N+++ +Y
Sbjct: 312 KGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVV--IGNALVNMY 369

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--CREEIKLGVVT 260
            K G +  A   F+ +  KD ++WN++++GY Q G   EA   ++ M  CR+ I     T
Sbjct: 370 AKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIP-NQGT 428

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
           +  +I +Y+ +G     M++  ++    +  DVF  TC+I  + + GR   A+ LF E+ 
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP 488

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
               +P    I S        +AL +  ++ +  VK     D +   SL++  S    ++
Sbjct: 489 RDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKA----DHITFVSLLSACSHSGLVD 544

Query: 381 AAERVFDMIKDK-----DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
             ++ FD+++ +      +  +  M+    +AGY  KAYEL   M    + P+   W  L
Sbjct: 545 EGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMP---IQPDASIWGAL 601

Query: 436 ISGYIQNGNED 446
           +S     GN +
Sbjct: 602 LSACKIYGNAE 612



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 107/461 (23%), Positives = 203/461 (44%), Gaps = 78/461 (16%)

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
           ++C ++ A     ++H+L +  G + ++++   LIN+Y    ++  +   FD I  K+++
Sbjct: 30  NSCVNVNATK---KLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIF 86

Query: 396 SWNSMIAGYCQAGYCGKAY----ELFIKMQESDVPPNVITWNVLISGYI----------- 440
           SWNS+I+ Y + G   +A     +LF       + P+  T+  ++   +           
Sbjct: 87  SWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVDGKKVHCC 146

Query: 441 --QNGNEDEA------VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNA 484
             + G ED+       V L+ R G  D           ++  SWN++I+G+ Q G    A
Sbjct: 147 VFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGA 206

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE---IHGCVLRRSLESSLPVMNSL 541
           LGV  +M+      + +T+ S+LP CA    S+ V     IH  VL+  L+S + V N+L
Sbjct: 207 LGVLNRMKGEGVKMDTITVASILPVCA---QSDDVINGVLIHLHVLKHGLDSDVFVSNAL 263

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
           I+ Y+K G +  ++ +FD M  +D+++WNS+I  Y  +     AL  F  M+  G++P+ 
Sbjct: 264 INMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDL 323

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
            T +S+    S      + + +   +     +   +   +A++++Y + G +  A    +
Sbjct: 324 LTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFD 383

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLA---IERLFDLEPG----------------- 701
            +P   D+  W  L+T    +G    A+ A   +E   D  P                  
Sbjct: 384 QLP-RKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGAL 442

Query: 702 -----------------DVLIQRLILQIYAICGKPEDALKV 725
                            DV +   ++ +Y  CG+ EDA+ +
Sbjct: 443 QQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSL 483


>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
 gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
          Length = 792

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 224/766 (29%), Positives = 380/766 (49%), Gaps = 88/766 (11%)

Query: 56  RRNTYINL----LQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDA 110
           RR+ Y+ L    LQ C    S+   + +H   L      + F+   L+ +Y  CG +  A
Sbjct: 37  RRHGYVELYDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLA 96

Query: 111 REVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           R  F++    + +  ++ M+ AY ++  W   +EL+  M ++G  PD   +  +L +C  
Sbjct: 97  RAAFQNFASIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSA 156

Query: 170 CGDFEAGKLMHSLVIKLGMSCVR---RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
            G     + +H+ +I+     +R    ++N+++ +Y KCG +  AR+ F+ +  +D V+W
Sbjct: 157 VGSLREAREIHASIIE-APQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSW 215

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------------- 261
            SMIS Y   G  DEA  L+ +M  + I+   +TF                         
Sbjct: 216 TSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVDGKAIHARIVSSNM 275

Query: 262 ------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
                 + LI  Y + G    A +  +++++      V  WT +++ + Q     +ALDL
Sbjct: 276 ESDFVGSALINMYARCGDVSSARQAFEKIQN----KHVVCWTSLMTAYVQTCHYREALDL 331

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           +  M   GV  +GVT  +A+ AC  L AL  G  IHS   + GF   ++V  +L+ MY+K
Sbjct: 332 YGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGF-QSLVVHTALLTMYAK 390

Query: 376 CEELEAAERVFDMIKDK-DVYSWNSMIAGYCQAGYCGKAYELFIKM-------------- 420
           C EL+AA  VF+ ++ K +VY W +MI+ Y QAG+  +A EL+ +M              
Sbjct: 391 CGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSN 450

Query: 421 ---------------------QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
                                + S++  NV   N L++ Y + G+ + A   F+  G+ D
Sbjct: 451 VLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKD 510

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
            V     SWN++I  Y Q G    AL +++ M S    P+ VTI S L ACA   +    
Sbjct: 511 LV-----SWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLG 565

Query: 520 KEIHGCVLR-RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           +EIH  VL+ +S  SSL V  +L++ Y + G +  +R++F+ M  +D+++W ++   Y  
Sbjct: 566 REIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQ 625

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
            G     LDL+ +M   G++PN  TF SI++  S AG++  G + F  +   ++++P+ E
Sbjct: 626 QGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIRE 685

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
           H+  M+DL GRSG+L +A   +E MP +PDS  W  +L +C+ H + D A  A  R+ +L
Sbjct: 686 HFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKEL 745

Query: 699 EPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIE 744
           +P +  +  L+  I+   G P++AL+V+   +E   +   GQ  IE
Sbjct: 746 DPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIE 791



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 160/620 (25%), Positives = 282/620 (45%), Gaps = 99/620 (15%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI---DV 91
           NG  N A+ +   +  +G +  + TY  +L +C    S+  AR++HA +    +I   ++
Sbjct: 122 NGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIEAPQIIRDNL 181

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            ++  L+++Y KCG +++AR+VF+ ++ R+  +W++MI +Y+ +    E ++L+  M  D
Sbjct: 182 SLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDAD 241

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+ PD   F   L AC    D   GK +H+ ++   M     V ++++ +Y +CG +  A
Sbjct: 242 GIQPDSITFTSALLACTKLVD---GKAIHARIVSSNMES-DFVGSALINMYARCGDVSSA 297

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------- 261
           R+ FE +  K  V W S+++ Y Q     EA  L+ +M  E +    VT+          
Sbjct: 298 RQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTALGACASL 357

Query: 262 ------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                     L+  Y + G+ D A  +  R+       +V+ WT
Sbjct: 358 GALKEGKAIHSRVFECGFQSLVVHTALLTMYAKCGELDAARAVFNRVRQ---KRNVYCWT 414

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            MIS +AQ G T +AL+L+ +M   G  PN  T ++ ++AC+    L  GM+IH      
Sbjct: 415 AMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENS 474

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
               +V V N+L+ MY+KC  LE A+  F+    KD+ SWN+MI  Y Q G   +A +L+
Sbjct: 475 ELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLY 534

Query: 418 IKMQESDVPPNVIT-----WNVLISGYIQNGNEDEA------------------VDLFQR 454
             M    V P+ +T         ISG +Q G E  +                  V+++ R
Sbjct: 535 QTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGR 594

Query: 455 MGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
            G+         D  +R+  SW ++ + Y Q G  +  L ++ +M      PN +T  S+
Sbjct: 595 CGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTSI 654

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS------------LIDTYAKSGNIVYS 554
           L  C+           H  +L R +E  L + +             ++D   +SG +  +
Sbjct: 655 LVGCS-----------HAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDA 703

Query: 555 RTIFDGMS-SKDIITWNSLI 573
             + + M    D + W +++
Sbjct: 704 EALVESMPYQPDSVAWLTVL 723



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 153/306 (50%), Gaps = 6/306 (1%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           G   EA+ + D +  +G +    T+ N+L AC  S  +    K+H  + N     +V V+
Sbjct: 424 GHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQ 483

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+++YAKCG L+ A+  FE    ++L +W+AMIGAY++    RE ++L+  M   G+ 
Sbjct: 484 NALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVL 543

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIK-LGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           PD+      L AC   G  + G+ +HS V+K         V+ +++ +Y +CG+L  AR 
Sbjct: 544 PDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARS 603

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            FE M ++D ++W +M S Y Q G  D+   L+ +M    I+   +TF  ++   +  G 
Sbjct: 604 MFEDMGQRDVLSWTAMTSAYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGL 663

Query: 274 CDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
               +E    M+S   + P    + CM+    ++GR   A  L + M +    P+ V   
Sbjct: 664 LARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPY---QPDSVAWL 720

Query: 333 SAISAC 338
           + + +C
Sbjct: 721 TVLGSC 726


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 242/790 (30%), Positives = 389/790 (49%), Gaps = 87/790 (11%)

Query: 159 LFPKI-LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
           L PK  + A  NC +    + +H+     GM     V N ++  Y     L  A   F+ 
Sbjct: 79  LNPKFYISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDG 138

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
           M  +D V+W+ M+ G+ ++G+       F ++ R   +    T   +IR+   L    +A
Sbjct: 139 MCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMA 198

Query: 278 M----------EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           +          E  + +       D+ TWT MI G+A+ G+ +++L LF++M   GV+P+
Sbjct: 199 LVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPD 258

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            V + + + AC  L A+     I     +  F  DV++G ++I+MY+KC  +E+A  +FD
Sbjct: 259 KVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFD 318

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL------------ 435
            +++K+V SW++MIA Y   G   KA +LF  M  S + P+ IT   L            
Sbjct: 319 RMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQ 378

Query: 436 ---------ISGYIQN---GNE-----------DEAVDLFQRMGKNDKVKRNTASWNSLI 472
                    + G +QN    N+           D+A  LF  M       R++ SW+ ++
Sbjct: 379 VRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGM-----CVRDSVSWSVMV 433

Query: 473 AGYQQLGQKNNALGVFR----------------------------KMQSSCFYPNCVTIL 504
            G+ ++G   N  G FR                            KM+     P+ V ++
Sbjct: 434 GGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMV 493

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           +V+ ACA L A +K + I   + R+  +  + +  ++ID +AK G +  +R IFD M  K
Sbjct: 494 TVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK 553

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           ++I+W+++I  Y  HG    ALDLF  M   G+ PN+ T +S++ A S AG+V+ G + F
Sbjct: 554 NVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFF 613

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
             + E Y +   ++HY+ ++DL GR+G+L+EA++ IE M +E D  +W A L ACR H +
Sbjct: 614 SLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKD 673

Query: 685 IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIE 744
           + LA  A   L +L+P +     L+  IYA  G+ ED  K R L  +   +   G  WIE
Sbjct: 674 VVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIE 733

Query: 745 VKNLVYTFVTGGWSESYSDLLYSWLQNVPEN--VTARSSHSGLCIEEEEKEEISGI---H 799
           V N  + F  G  +   S  +Y  L+++     +      +   + + ++E   GI   H
Sbjct: 734 VDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSH 793

Query: 800 SEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
           SEKLA+AF LI + +  HT IRI+KN+R+C  CH   K VS +    I + D+   HHFK
Sbjct: 794 SEKLAIAFGLIATPE--HTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFK 851

Query: 859 NGQCSCGDYW 868
            G CSCGDYW
Sbjct: 852 EGACSCGDYW 861



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 201/437 (45%), Gaps = 71/437 (16%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           G+ NE++ + + +  +G    +   + ++ AC    ++H AR +  ++     ++DV + 
Sbjct: 238 GKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG 297

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T ++ +YAKCGC++ ARE+F+ M E+N+ +WSAMI AY    + R+ ++LF +M+  G+ 
Sbjct: 298 TAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGML 357

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD      +L AC NC +    + +H+     GM     V N ++  Y     L  A   
Sbjct: 358 PDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGL 417

Query: 215 FESMDEKDGVAWNSMISGYFQIGE----------------------------NDEAHRLF 246
           F+ M  +D V+W+ M+ G+ ++G+                             +E+  LF
Sbjct: 418 FDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLF 477

Query: 247 DKM------------------C-----------------REEIKLGVVTFNILIRSYNQL 271
           DKM                  C                 R++ +L V+    +I  + + 
Sbjct: 478 DKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKC 537

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           G  + A E+  RME      +V +W+ MI+ +  +G+  +ALDLF  M   G++PN +T+
Sbjct: 538 GCVESAREIFDRMEE----KNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITL 593

Query: 332 TSAISACTDLKALAMGMEIHSLAVK-MGFTDDVLVGNSLINMYSKCEELEAAERVFD-MI 389
            S + AC+    +  G+   SL  +      DV     ++++  +   L+ A ++ + M 
Sbjct: 594 VSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMT 653

Query: 390 KDKDVYSWNSMIAGYCQ 406
            +KD   W + + G C+
Sbjct: 654 VEKDEGLWGAFL-GACR 669



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 117/230 (50%), Gaps = 8/230 (3%)

Query: 6   LTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQ 65
           +  F     L+   + P   D +    CGN   NE++ + D +  +G    +   + ++ 
Sbjct: 443 MNCFGTFRELIRCGARP---DNYTLPFCGNA--NESLVLFDKMREEGVVPDKVAMVTVVF 497

Query: 66  ACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYT 124
           AC    ++H AR +  ++     ++DV + T ++ ++AKCGC++ ARE+F+ M E+N+ +
Sbjct: 498 ACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVIS 557

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           WSAMI AY    + R+ ++LF +M++ G+ P+      +L AC + G  E G    SL+ 
Sbjct: 558 WSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMW 617

Query: 185 K-LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISG 232
           +   +    +    V+ +  + G+L  A +  ESM  EKD   W + +  
Sbjct: 618 EDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGA 667



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 145/317 (45%), Gaps = 32/317 (10%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVF 92
           G GR  +A+ +   + + G    + T  +LL ACI+  ++   R++HA  ++   + ++ 
Sbjct: 339 GQGR--KALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLI 396

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRW-------REVVE-- 143
           V  KL+  Y+    LDDA  +F+ M  R+  +WS M+G +++   +       RE++   
Sbjct: 397 VANKLVHFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCG 456

Query: 144 -------------------LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
                              LF  M ++G+ PD      ++ AC   G     + +   + 
Sbjct: 457 ARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQ 516

Query: 185 KLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHR 244
           +        +  +++ ++ KCG +  AR  F+ M+EK+ ++W++MI+ Y   G+  +A  
Sbjct: 517 RKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALD 576

Query: 245 LFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGF 303
           LF  M R  I    +T   L+ + +  G  +  +     M E   +  DV  +TC++   
Sbjct: 577 LFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLL 636

Query: 304 AQNGRTSQALDLFKEMS 320
            + GR  +AL L + M+
Sbjct: 637 GRAGRLDEALKLIESMT 653


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 205/584 (35%), Positives = 316/584 (54%), Gaps = 17/584 (2%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            P+VF W  +I G  +N +  +A+  +  M  +   PN  T  +   AC+  +A+  G +
Sbjct: 95  NPNVFIWNIVIKGCLENNKLFKAIYFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQ 153

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           IH   VK G   DV + ++ I MY+    LE A ++F    + DV  WN+MI GY + G 
Sbjct: 154 IHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMF-YSGESDVVCWNTMIDGYLKCGV 212

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
              A  LF +M       N+ +WNV+I+G  + GN  +A  LF  M + D++     SW+
Sbjct: 213 LEAAKGLFAQMPVK----NIGSWNVMINGLAKGGNLGDARKLFDEMSERDEI-----SWS 263

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           S++ GY   G+   AL +F++MQ     P    + SVL AC+ + A ++ + +H  + R 
Sbjct: 264 SMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRN 323

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
           S++    +  +L+D YAK G +     +F+ M  ++I TWN++I G  +HG    AL+LF
Sbjct: 324 SIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELF 383

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            +++   +KPN  T + ++ A + AG VD G ++F ++ E Y + P +EHY  M+DL GR
Sbjct: 384 SKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGR 443

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           SG   EA + I  MP++P++++W ALL ACRIHGN DLA    + L +LEP +     L+
Sbjct: 444 SGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRYVLL 503

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             IYA  G+ +D  K+RKL +    +   G   +++   V+ F  G  S      +Y  L
Sbjct: 504 SNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKL 563

Query: 770 QNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
           + + E +     +  +S     I+EEEKE     HSEKLA+AF LI +      I IVKN
Sbjct: 564 KIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLINTLPGKR-IHIVKN 622

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +R+C  CH   K +S +   EI + D    HHFKNG CSC D+W
Sbjct: 623 LRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDFW 666



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 195/387 (50%), Gaps = 13/387 (3%)

Query: 72  SIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKC--GCLDDAREVFEDMRERNLYTWSAM 128
           S+    +LHA +       D +V   LL  YA       D A +VF  +   N++ W+ +
Sbjct: 45  SLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIV 104

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM 188
           I     + +  + +  +  MV D   P+ F +P + +AC      + G+ +H  V+K G+
Sbjct: 105 IKGCLENNKLFKAIYFYGRMVIDAR-PNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGI 163

Query: 189 SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
                ++++ + +Y   G+L  AR+ F S  E D V WN+MI GY + G  + A  LF +
Sbjct: 164 GSDVHIKSAGIQMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLFAQ 222

Query: 249 MCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR 308
           M  + I     ++N++I    + G    A ++   M       D  +W+ M+ G+   GR
Sbjct: 223 MPVKNIG----SWNVMINGLAKGGNLGDARKLFDEMSER----DEISWSSMVDGYISAGR 274

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
             +AL++F++M      P    ++S ++AC+++ A+  G  +H+   +     D ++G +
Sbjct: 275 YKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTA 334

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           L++MY+KC  L+    VF+ +K++++++WN+MI G    G    A ELF K+QE  + PN
Sbjct: 335 LLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPN 394

Query: 429 VITWNVLISGYIQNGNEDEAVDLFQRM 455
            IT   +++     G  D+ + +FQ M
Sbjct: 395 GITLVGVLTACAHAGFVDKGLRIFQTM 421



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 149/302 (49%), Gaps = 11/302 (3%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           +++  AK G L DAR++F++M ER+  +WS+M+  Y    R++E +E+F  M ++   P 
Sbjct: 234 MINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPG 293

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            F+   +L AC N G  + G+ +H+ + +  +     +  ++L +Y KCG+L      FE
Sbjct: 294 RFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFE 353

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            M E++   WN+MI G    G  ++A  LF K+    +K   +T   ++ +    G  D 
Sbjct: 354 EMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDK 413

Query: 277 AMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            + + + M E  G+ P++  + CM+    ++G  S+A DL   M    + PN     + +
Sbjct: 414 GLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMP---MKPNAAVWGALL 470

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDD---VLVGNSLINMYSKCEELEAAERVFDMIKDK 392
            AC       +   +  + +++   +    VL    L N+Y+K    +   ++  ++K++
Sbjct: 471 GACRIHGNFDLAERVGKILLELEPQNSGRYVL----LSNIYAKVGRFDDVSKIRKLMKNR 526

Query: 393 DV 394
            +
Sbjct: 527 GI 528



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 181/465 (38%), Gaps = 130/465 (27%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           N +L +AI     +    A+  + TY  L +AC  + ++   R++H   +      DV +
Sbjct: 111 NNKLFKAIYFYGRMVID-ARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           K+  + +YA  G L+DAR++F    E ++  W+ MI  Y +                   
Sbjct: 170 KSAGIQMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLK------------------- 209

Query: 154 FPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
                           CG  EA K L   + +K   S      N ++    K G L  AR
Sbjct: 210 ----------------CGVLEAAKGLFAQMPVKNIGSW-----NVMINGLAKGGNLGDAR 248

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE------------------- 253
           + F+ M E+D ++W+SM+ GY   G   EA  +F +M REE                   
Sbjct: 249 KLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIG 308

Query: 254 ----------------IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                           IKL  V    L+  Y + G+ D+  E+ + M+      ++FTW 
Sbjct: 309 AIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKER----EIFTWN 364

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            MI G A +GR   AL+LF ++    + PNG+T+   ++AC                   
Sbjct: 365 AMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACA----------------HA 408

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIK-----DKDVYSWNSMIAGYCQAGYCGK 412
           GF D  L                   R+F  ++     D ++  +  M+    ++G   +
Sbjct: 409 GFVDKGL-------------------RIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSE 449

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
           A +L   M    + PN   W  L+     +GN     DL +R+GK
Sbjct: 450 AEDLINSMP---MKPNAAVWGALLGACRIHGN----FDLAERVGK 487



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 182/397 (45%), Gaps = 38/397 (9%)

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCE--ELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           ++H+L ++ G   D  V  +L+  Y+       + A +VF  I + +V+ WN +I G  +
Sbjct: 51  QLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVL-----ISGYIQNGNEDEAVDLFQRMGKNDKV 461
                KA   + +M   D  PN  T+  L     ++  +Q G +     +   +G +  +
Sbjct: 111 NNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
           K      ++ I  Y   G+  +A  +F   +S     N  T++     C  L A+     
Sbjct: 170 K------SAGIQMYASFGRLEDARKMFYSGESDVVCWN--TMIDGYLKCGVLEAA----- 216

Query: 522 IHGCVLRRSLESSLPVM-----NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
                  + L + +PV      N +I+  AK GN+  +R +FD MS +D I+W+S++ GY
Sbjct: 217 -------KGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGY 269

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
           +  G +  AL++F QM+    +P R    S++ A S  G +D G+ V   +      +  
Sbjct: 270 ISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDA 329

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF 696
           +   +A++D+Y + G+L+   E  E+M  E +   W A++    IHG  + A+    +L 
Sbjct: 330 VLG-TALLDMYAKCGRLDMGWEVFEEMK-EREIFTWNAMIGGLAIHGRAEDALELFSKLQ 387

Query: 697 D--LEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
           +  ++P  + +   +L   A  G  +  L++ +  RE
Sbjct: 388 EGRMKPNGITLVG-VLTACAHAGFVDKGLRIFQTMRE 423



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 174/397 (43%), Gaps = 17/397 (4%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT- 87
           +D     GR  EA+ +   +  +  +  R    ++L AC +  +I   R +HA+L   + 
Sbjct: 266 VDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSI 325

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           ++D  + T LL +YAKCG LD   EVFE+M+ER ++TW+AMIG  +   R  + +ELF  
Sbjct: 326 KLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGRAEDALELFSK 385

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           + +  + P+      +L AC + G  + G ++  ++    G+         ++ +  + G
Sbjct: 386 LQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDLLGRSG 445

Query: 207 KLIWARRFFESMDEKDGVA-WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
               A     SM  K   A W +++      G  D A R+  K+  E        + +L 
Sbjct: 446 LFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERV-GKILLELEPQNSGRYVLLS 504

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ-----NGRTSQALDLFKEMS 320
             Y ++G+ D   ++ K M++ GI          ++G        +G   Q  ++++++ 
Sbjct: 505 NIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMGDGSHPQMKEIYRKLK 564

Query: 321 FVG---VMPNGVTITSAISACTDLKALAMGMEIHS--LAVKMGFTDDVLVGNS--LINMY 373
            +     M      TS +    D +     +  HS  LA+  G   + L G    ++   
Sbjct: 565 IIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIAFGLI-NTLPGKRIHIVKNL 623

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
             C++  +A ++   I D+++   + +   + + G C
Sbjct: 624 RVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTC 660


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  360 bits (923), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 199/551 (36%), Positives = 305/551 (55%), Gaps = 46/551 (8%)

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           GV PN  T+++ + AC  + +L  G + H+  +KMGF  DV+V  +L++MY++C  LE A
Sbjct: 5   GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDA 64

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
             VFD + ++                                      TWN +I+G+ QN
Sbjct: 65  GHVFDKMSERSTR-----------------------------------TWNAMITGHAQN 89

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
            +  +A+ LF  M + D V     SW ++IAGY Q G  + +L VF +M+ +    +   
Sbjct: 90  RDMKKALKLFYEMSERDVV-----SWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSDRFI 144

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
           + SVL ACA L A    ++ H  V++      + V ++L+D YAKSG++  +  +FD M 
Sbjct: 145 MGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFDKMP 204

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            ++ ++WNS+I G   HG  + A+ LF+QM   G+KPN  +F+ ++ A S  G+V+ G+ 
Sbjct: 205 QRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRG 264

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F  +T+ Y I+P + HY+ MIDL GR+G L+EA  FI  MP+EPD S+W ALL ACRIH
Sbjct: 265 YFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDVSVWGALLGACRIH 324

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
           GN +LA    E L  +E     I  L+  IYA  G+ +DA KVRKL ++       G  W
Sbjct: 325 GNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSW 384

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISG 797
           IEVK +++ FV G  S      ++ +L+++   + A             +E++EKE    
Sbjct: 385 IEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKAAGYVPNKNFVLQDVEDDEKELSLS 444

Query: 798 IHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF 857
            HSEKLA+AF +I ++    TIR+ KN+R+C  CH   K++S+    +I + D+   HHF
Sbjct: 445 HHSEKLAIAFGIINTNPGT-TIRVAKNLRVCGDCHTVIKFISLNFTRKIVVRDANRFHHF 503

Query: 858 KNGQCSCGDYW 868
           K+G+CSCGDYW
Sbjct: 504 KDGRCSCGDYW 514



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 165/325 (50%), Gaps = 39/325 (12%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           MV  G+ P+ F    +++AC +    E GK  H+ +IK+G      V+ +++ +Y +CG 
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           L  A   F+ M E+    WN+MI+G+ Q  +  +A +LF                     
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLF--------------------- 99

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
                      EM +R        DV +WT +I+G+AQNG   ++L++F +M   G+  +
Sbjct: 100 ----------YEMSER--------DVVSWTAVIAGYAQNGYGDESLNVFNQMRKTGMKSD 141

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
              + S +SAC DL AL +G + H+  V+ GF  D++VG++L++MY+K   +E A +VFD
Sbjct: 142 RFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMEDACQVFD 201

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
            +  ++  SWNS+I G  Q G    A  LF +M ++ + PN I++  ++S     G  +E
Sbjct: 202 KMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNE 261

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLI 472
               F  M +N  +  + + +  +I
Sbjct: 262 GRGYFNLMTQNYGIVPDVSHYTCMI 286



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 190/394 (48%), Gaps = 60/394 (15%)

Query: 51  QGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDD 109
           +G K  + T   +++AC    S+   ++ H ++  +  E DV V+T L+ +YA+CG L+D
Sbjct: 4   KGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLED 63

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ------------------- 150
           A  VF+ M ER+  TW+AMI  +++++  ++ ++LF+ M +                   
Sbjct: 64  AGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYG 123

Query: 151 ------------DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV 198
                        G+  D F+   +L AC +    E G+  H+ V++ G +    V +++
Sbjct: 124 DESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSAL 183

Query: 199 LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV 258
           + +Y K G +  A + F+ M +++ V+WNS+I+G  Q G  ++A  LF++M +  IK   
Sbjct: 184 VDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNE 243

Query: 259 VTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           ++F  ++ + +  G  +        M ++ GI PDV  +TCMI    + G   +A +   
Sbjct: 244 ISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAENFIN 303

Query: 318 EMSFVGVMPNGVTITSAISAC-----TDL-KALA---MGMEIHSLAVKMGFTDDVLVGNS 368
            M    V P+     + + AC     T+L K +A   +GME+    + +           
Sbjct: 304 GMP---VEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYV----------L 350

Query: 369 LINMYSKCEELEAAERVFDMIKDKDV-----YSW 397
           L N+Y+   + + A +V  ++KD+ V     YSW
Sbjct: 351 LSNIYAAAGQWDDAAKVRKLMKDRGVMKQPGYSW 384



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 158/343 (46%), Gaps = 20/343 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NG  +E++ V + +   G K  R    ++L AC D  ++ L R+ HA++      +D+ V
Sbjct: 120 NGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVV 179

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAK G ++DA +VF+ M +RN  +W+++I   ++  R  + V LF  M+Q G+
Sbjct: 180 GSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGI 239

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIK-LGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            P++  F  +L AC + G    G+   +L+ +  G+         ++ +  + G L  A 
Sbjct: 240 KPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAE 299

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
            F   M  E D   W +++      G  + A R+ + +   E+++  + + +L   Y   
Sbjct: 300 NFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGI-YVLLSNIYAAA 358

Query: 272 GQCDVAMEMVKRMESLGITPDV-FTW---TCMISGFAQNGRTSQAL---------DLFKE 318
           GQ D A ++ K M+  G+     ++W     ++  F   G TS             L ++
Sbjct: 359 GQWDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVA-GETSHPQLKEIHEFLESLSRK 417

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
           M   G +PN   +   +    D K L++      LA+  G  +
Sbjct: 418 MKAAGYVPNKNFVLQDVE--DDEKELSLSHHSEKLAIAFGIIN 458


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  360 bits (923), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 215/622 (34%), Positives = 334/622 (53%), Gaps = 49/622 (7%)

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
           +  + F W  MI G+A NG   ++L L++EM   G   +  T    + AC DL  + +G 
Sbjct: 122 VLKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGR 181

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
            +HS  V  G   D+ VGNSL+ MY+K  ++  A  VFD + ++D+ SWN+MI+GY +  
Sbjct: 182 RVHSEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNA 241

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLIS---------------GY-IQN--GNED---- 446
             G A+ +F  M ++ +  +  T   L+S               GY ++N  GN +    
Sbjct: 242 DSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFT 301

Query: 447 --------------EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
                         +A  LF+R+   D     T SWNS+I GY + G    +L +FR+M 
Sbjct: 302 NSLIEMYCNCNCMVDARRLFERVRWKD-----TVSWNSMILGYARNGDAFESLRLFRRMA 356

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
                P+ VT ++VL AC  + A      IH  ++++  +++  V  +L+D Y+K G++ 
Sbjct: 357 LDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLA 416

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            SR +FD M  K +++W++++ GY LHG    A+ + D MK+  + P+ G F SI+ A S
Sbjct: 417 CSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACS 476

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
            AG+V  GK++F  + + Y + P + HYS M+DL GR+G L+EA   I  M I+P S IW
Sbjct: 477 HAGLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIW 536

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
            ALLTA R+H NI LA ++ +++FD+ P  V     +  IYA   + +D  +VR + R  
Sbjct: 537 AALLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRK 596

Query: 733 TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----I 787
             + S G  +IE+ N+V+ F+ G  S   ++ +Y+ L  + + +               +
Sbjct: 597 GLKKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDV 656

Query: 788 EEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEI 846
           EEE KE++   HSE+LA+AFALI +   P T IRI KN+R+C  CH   K +S +   EI
Sbjct: 657 EEEVKEKMLWDHSERLAIAFALINT--GPGTVIRITKNLRVCGDCHTVTKLISELTGREI 714

Query: 847 FLADSKCLHHFKNGQCSCGDYW 868
            + D    HHF  G CSCGDYW
Sbjct: 715 IMRDIHRFHHFIKGFCSCGDYW 736



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 235/465 (50%), Gaps = 36/465 (7%)

Query: 63  LLQACIDSNSIHLARKLHAFL--NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           LLQ+  ++ S    ++LHA +    + E + ++ TKL + YA CG +  A  +F+ +  +
Sbjct: 65  LLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLK 124

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           N + W+ MI  Y+ +    + + L+  M+  G   D+F +P +L+ACG+    E G+ +H
Sbjct: 125 NSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVH 184

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
           S V+  G+     V NS+LA+Y K G +  AR  F+ M E+D  +WN+MISGY +  ++ 
Sbjct: 185 SEVVVCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSG 244

Query: 241 EAHRLFDKMCR--------------------EEIKLGVVTFNILIR----SYNQL----- 271
            A  +FD M +                    + +K G V     +R    +YN+      
Sbjct: 245 TAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSL 304

Query: 272 ----GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
                 C+  ++  +  E +    D  +W  MI G+A+NG   ++L LF+ M+  G  P+
Sbjct: 305 IEMYCNCNCMVDARRLFERVR-WKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPD 363

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            VT  + + AC  + AL  GM IHS  VK GF  + +VG +L++MYSKC  L  + RVFD
Sbjct: 364 QVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFD 423

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
            + DK + SW++M+AGY   G   +A  +   M+ + V P+   +  ++S     G   E
Sbjct: 424 EMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVE 483

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
             ++F +M K   VK   + ++ ++    + G  + A  + R M+
Sbjct: 484 GKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTME 528



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 169/349 (48%), Gaps = 33/349 (9%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           NG   +++ +   +   G +    TY  +L+AC D   + + R++H+ + +   E D++V
Sbjct: 139 NGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYV 198

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              LL++YAK G +  AR VF+ M ER+L +W+ MI  Y+++        +F LM + GL
Sbjct: 199 GNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGL 258

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR-VRNSVLAVYVKCGKLIWAR 212
           F D      +L AC +    + GK++H   ++  +    +   NS++ +Y  C  ++ AR
Sbjct: 259 FADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDAR 318

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           R FE +  KD V+WNSMI GY + G+  E+ RLF +M  +      VTF  ++ + +Q+ 
Sbjct: 319 RLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIA 378

Query: 273 QCDVAM----------------------EMVKRMESLGITPDVF---------TWTCMIS 301
                M                      +M  +  SL  +  VF         +W+ M++
Sbjct: 379 ALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVA 438

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           G+  +GR  +A+ +   M    V+P+    TS +SAC+    +  G EI
Sbjct: 439 GYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEI 487



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 165/364 (45%), Gaps = 13/364 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVF 92
           N     A  V D +   G      T + LL AC D  ++   + +H +   N +   + F
Sbjct: 240 NADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKF 299

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
               L+ +Y  C C+ DAR +FE +R ++  +W++MI  Y+R+    E + LF  M  DG
Sbjct: 300 FTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDG 359

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             PD   F  +L AC        G  +HS ++K G      V  +++ +Y KCG L  +R
Sbjct: 360 SGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSR 419

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           R F+ M +K  V+W++M++GY   G   EA  + D M    +      F  ++ + +  G
Sbjct: 420 RVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAG 479

Query: 273 QCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
                 E+  +ME    + P +  ++CM+    + G   +A  + + M    + P     
Sbjct: 480 LVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTME---IKPTSDIW 536

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI---NMYSKCEELEAAERVFDM 388
            + ++A      L   +++  ++ +  F  +  V +S I   N+Y+  +  +  ERV  M
Sbjct: 537 AALLTA----SRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAM 592

Query: 389 IKDK 392
           ++ K
Sbjct: 593 VRRK 596


>gi|225436291|ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 906

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 257/887 (28%), Positives = 425/887 (47%), Gaps = 76/887 (8%)

Query: 30  DFLCGNGRLNEAITVLDSIATQGAKVRRNTYI--NLLQACIDSNSIHLARKLHAFL-NLV 86
           D LCG+G               G  +R ++++   +L+AC     +   R +H  +    
Sbjct: 48  DMLCGSG---------------GGLLRPDSFVFAVVLRACGMVECLSYGRGVHGLVVKQS 92

Query: 87  TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
           + +D FV+  L+S+Y  CG L+DA  VF  + + +L  WS+++  Y ++    E + +F 
Sbjct: 93  SVVDSFVENALVSMYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFC 152

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            MV  G+ PD F F  +L AC N   ++ G   H  +IK+G      + NS++  Y KCG
Sbjct: 153 DMVSGGIEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCG 212

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            L   RR F  M EK+ V+WN+ I+GY       EA R+F  +  E  +    +   +++
Sbjct: 213 DLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILK 272

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF-------AQNGRTSQALDLFKEM 319
           + + LG  D   E+   +   GI  + +  + ++  +       +   R    L L   +
Sbjct: 273 AVSGLGHLDHGKEIHGYILRAGIETNRYVVSSLLDMYIGCIDHESLYPRVEVPLKLLNYL 332

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
              G   +   +TS +  C+   +L  G   HSL +K+    D  V +SLI+MYSKC   
Sbjct: 333 EGGGY--DEFIMTSLLKWCSLESSLESGKMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIW 390

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
           EAA+RVF  ++  D   W+++I+G+   G   +A +LF KMQ   +  N  T+  +I   
Sbjct: 391 EAAKRVFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILAC 450

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV------------ 487
           +   N  +  +L  ++ ++   + N +  N+LI  Y +L Q   AL +            
Sbjct: 451 LALENLRKGKELHCKILRSG-YESNFSVVNTLINLYSELWQHKQALKLCSMIPDSEISWN 509

Query: 488 ------------------FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
                               ++Q S    + V+   +  +C+  V  N   + H  + +R
Sbjct: 510 FLIRACLGAEDYEIIHKLLWRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQAHAYMTKR 569

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            L S   + NSLI  Y+  G    +   F+ M  KD  +W S++   V HG    AL+L 
Sbjct: 570 GLISHPTISNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSEALNLI 629

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            QM+      ++ TF S++ A +  G+VD   ++F S+ E Y I P+ EHYS M+++ GR
Sbjct: 630 SQMRWKNKPADQSTFRSVLNACAQMGLVDEAFRLFFSMKEVYGIEPLEEHYSCMVEVLGR 689

Query: 650 SGKLEEAMEFIEDMP-IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           +G  EE ++FI  +P  +    IW  LL++ RIHGN+ +A  A E+L +LEP D     L
Sbjct: 690 AGMFEEVLDFINGVPTFKLGPLIWRTLLSSSRIHGNMKVAQYAAEKLLELEPSDFSANLL 749

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           + Q+    G+ ++ALK++      T+       WIE++N +Y F +    E+ +  + + 
Sbjct: 750 LEQVLLTLGEWDNALKLKT----KTKSMRASSSWIEIRNRIYEFAS---DENPAKEVSAK 802

Query: 769 LQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH--TIRI 821
           L  +   +      A  +H     EEEE + +   H+E  ALAF LI     PH   +R+
Sbjct: 803 LAEIEGKMEELGYVADKNHLLHNAEEEEYDGVGLHHTEMKALAFGLI---SLPHGMPVRV 859

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           VKN+RMC  CH   K++S     E+ + D    HHF++G+CSC D W
Sbjct: 860 VKNVRMCGDCHSACKFMSTFLERELVVKDPYSFHHFRDGKCSCRDTW 906



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 177/682 (25%), Positives = 310/682 (45%), Gaps = 75/682 (10%)

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV---QDGLF-P 155
           +Y   G + +AR++F++M ER+L +W+ ++  Y+R     EV+ +F+ M+     GL  P
Sbjct: 1   MYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRP 60

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D F+F  +L+ACG       G+ +H LV+K        V N+++++Y  CG L  A   F
Sbjct: 61  DSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSCGALEDAAVVF 120

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
             +D+ D V W+S++SGY + G  +E  R+F  M    I+     F++++ +   L   D
Sbjct: 121 GGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSGGIEPDAFAFSMVLGACTNLECWD 180

Query: 276 VA-------------------------------MEMVKRMESLGITPDVFTWTCMISGFA 304
                                            +E ++R+ S     ++ +W   I+G+ 
Sbjct: 181 FGTQAHCYIIKMGFDSCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYV 240

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
            N    +AL +F+ +       +  ++ S + A + L  L  G EIH   ++ G   +  
Sbjct: 241 HNFHYLEALRIFQILMEEVSQCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRY 300

Query: 365 VGNSLINMYSKCEELEAA-ERV--------------FDMIKDKDVYSWNSMIAGYCQAGY 409
           V +SL++MY  C + E+   RV              +D      +  W S+ +       
Sbjct: 301 VVSSLLDMYIGCIDHESLYPRVEVPLKLLNYLEGGGYDEFIMTSLLKWCSLESSL----E 356

Query: 410 CGKAYE-LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
            GK +  L IK+   D+  +    + LI  Y + G  + A  +F R+ + D     TA W
Sbjct: 357 SGKMFHSLIIKL---DLKSDSYVLSSLIDMYSKCGIWEAAKRVFTRVEQPD-----TAPW 408

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           ++LI+G+   G    AL +FRKMQ      N  T  SV+ AC  L    K KE+H  +LR
Sbjct: 409 SALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILACLALENLRKGKELHCKILR 468

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI---CGYVLHGFWHAA 585
              ES+  V+N+LI+ Y++      +  +   +   + I+WN LI    G   +   H  
Sbjct: 469 SGYESNFSVVNTLINLYSELWQHKQALKLCSMIPDSE-ISWNFLIRACLGAEDYEIIHKL 527

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII-PMIEHYSAMI 644
           L    Q+    L P       I  + S   ++++G +    +T+   I  P I   +++I
Sbjct: 528 LWRI-QVSHGNLDPVSAC--DIFASCSSPVLLNVGTQAHAYMTKRGLISHPTIS--NSLI 582

Query: 645 DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL-FDLEPGDV 703
            +Y   GK +EA++    MP E D+  W ++L+A   HG+   A+  I ++ +  +P D 
Sbjct: 583 QMYSACGKFDEAVQAFNLMP-EKDTCSWTSILSARVEHGHPSEALNLISQMRWKNKPADQ 641

Query: 704 LIQRLILQIYAICGKPEDALKV 725
              R +L   A  G  ++A ++
Sbjct: 642 STFRSVLNACAQMGLVDEAFRL 663


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 237/820 (28%), Positives = 398/820 (48%), Gaps = 95/820 (11%)

Query: 130 GAYSRDQRW--REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
            AY+   +W   E+  L  L    G+  D F   + LQ C   GD   G+ +H  V++ G
Sbjct: 32  AAYAAALQWLEDELTSLAILPSVPGV--DSFACARQLQGCIARGDARGGRAVHGHVVRRG 89

Query: 188 MSCVRRV----RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
              V R+     N +L +Y K G L  ARR F+ M E++ V++ +++  + Q G+ + A 
Sbjct: 90  --GVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAA 147

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG--------------- 288
            LF ++  E  ++       +++    +    +A  +      LG               
Sbjct: 148 ALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAY 207

Query: 289 ----------------ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
                           +  D   WT M+S +++N     A  +F +M   G  PN   +T
Sbjct: 208 SLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALT 267

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           S + A   L ++ +G  IH  A+K     +  VG +L++MY+KC +++ A   F+MI   
Sbjct: 268 SVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYD 327

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN------------------------ 428
           DV   + MI+ Y Q+    +A+ELF+++  S V PN                        
Sbjct: 328 DVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIH 387

Query: 429 -----------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
                      +   N L+  Y +  + D ++ +F  +   ++V     SWN+++ G+ Q
Sbjct: 388 NHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEV-----SWNTIVVGFSQ 442

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
            G    AL VF +MQ++      VT  SVL ACA   +     +IH  + + +  +   +
Sbjct: 443 SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVI 502

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
            NSLIDTYAK G I  +  +F  +  +DII+WN++I GY LHG    AL+LFD+M    +
Sbjct: 503 GNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNV 562

Query: 598 KPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
           + N  TF++++   S  G+V+ G  +F S+   + I P +EHY+ ++ L GR+G+L +A+
Sbjct: 563 ESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDAL 622

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICG 717
           +FI D+P  P + +W ALL++C IH N+ L   + E++ ++EP D     L+  +YA  G
Sbjct: 623 QFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAG 682

Query: 718 KPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT 777
             +    +RK  R    R   G  W+E+K  ++ F  G  S  + D+    +  + E + 
Sbjct: 683 SLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVG--SVDHPDMRV--INAMLEWLN 738

Query: 778 ARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMC 828
            ++S  G           +++E+K  +  +HSE+LALA+ L+ +    H IRI+KN+R C
Sbjct: 739 LKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPG-HPIRILKNLRSC 797

Query: 829 VHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           + CH     +S +   EI + D    HHF++G+CSCGDYW
Sbjct: 798 LDCHTAFTVISKIVKREIIVRDINRFHHFEDGKCSCGDYW 837



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 153/639 (23%), Positives = 282/639 (44%), Gaps = 103/639 (16%)

Query: 64  LQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           LQ CI        R +H  +     V  +D+F    LL++Y K G L  AR +F+ M ER
Sbjct: 66  LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           N+ ++  ++ A+++   +     LF  +  +G   + F+   +L+             +H
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
           S   KLG      V + ++  Y  C  +  A   F  +  KD V W +M+S Y +    +
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245

Query: 241 EAHRLFDKM--------------------CREEIKLGVVTFNILIRSYN----------- 269
            A R+F KM                    C   + LG       I++ N           
Sbjct: 246 NAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALL 305

Query: 270 -------QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
                   +    +A EM+          DV   + MIS +AQ+ +  QA +LF  +   
Sbjct: 306 DMYAKCGDIKDARLAFEMIP-------YDDVILLSFMISRYAQSNQNEQAFELFLRLMRS 358

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
            V+PN  +++S + ACT++  L  G +IH+ A+K+G   D+ VGN+L++ Y+KC +++++
Sbjct: 359 SVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSS 418

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---------- 432
            ++F  ++D +  SWN+++ G+ Q+G   +A  +F +MQ + +P   +T+          
Sbjct: 419 LKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAST 478

Query: 433 -------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTAS 467
                                    N LI  Y + G   +A+ +FQ +     ++R+  S
Sbjct: 479 ASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-----MERDIIS 533

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           WN++I+GY   GQ  +AL +F +M  S    N +T +++L  C+     N     HG  L
Sbjct: 534 WNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVN-----HGLSL 588

Query: 528 RRSL------ESSLPVMNSLIDTYAKSGNIVYS-RTIFDGMSSKDIITWNSLICGYVLHG 580
             S+      + S+     ++    ++G +  + + I D  S+   + W +L+   ++H 
Sbjct: 589 FDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHK 648

Query: 581 FWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSLAGMVD 618
             + AL  F   K   ++P +  T++ +   ++ AG +D
Sbjct: 649 --NVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLD 685



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 126/507 (24%), Positives = 228/507 (44%), Gaps = 35/507 (6%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           G    A  +   +  +G +V +     +L+  I  ++  LA  +H+    L  + + FV 
Sbjct: 141 GDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVG 200

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           + L+  Y+ C  + DA  VF  +  ++   W+AM+  YS +        +F  M   G  
Sbjct: 201 SGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCK 260

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+ F    +L+A         GK +H   IK        V  ++L +Y KCG +  AR  
Sbjct: 261 PNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLA 320

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           FE +   D +  + MIS Y Q  +N++A  LF ++ R  +     + + ++++   + Q 
Sbjct: 321 FEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQL 380

Query: 275 DVAMEMVKRMESLGITPDVF-------------------------------TWTCMISGF 303
           D   ++      +G   D+F                               +W  ++ GF
Sbjct: 381 DFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGF 440

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
           +Q+G   +AL +F EM    +    VT +S + AC    ++    +IH    K  F +D 
Sbjct: 441 SQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDT 500

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
           ++GNSLI+ Y+KC  +  A +VF  + ++D+ SWN++I+GY   G    A ELF +M +S
Sbjct: 501 VIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKS 560

Query: 424 DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
           +V  N IT+  L+S     G  +  + LF  M  +  +K +   +  ++    + G+ N+
Sbjct: 561 NVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLND 620

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPAC 510
           AL     + S+   P+ +   ++L +C
Sbjct: 621 ALQFIGDIPSA---PSAMVWRALLSSC 644



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 102/458 (22%), Positives = 204/458 (44%), Gaps = 38/458 (8%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLS 99
           A  V   +   G K       ++L+A +   S+ L + +H   +  + + +  V   LL 
Sbjct: 247 AFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLD 306

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +YAKCG + DAR  FE +   ++   S MI  Y++  +  +  ELF  +++  + P+++ 
Sbjct: 307 MYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYS 366

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
              +LQAC N    + GK +H+  IK+G      V N+++  Y KC  +  + + F S+ 
Sbjct: 367 LSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLR 426

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR------SYNQLGQ 273
           + + V+WN+++ G+ Q G  +EA  +F +M   ++    VT++ ++R      S    GQ
Sbjct: 427 DANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQ 486

Query: 274 --------------------------CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
                                     C    + +K  + L +  D+ +W  +ISG+A +G
Sbjct: 487 IHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALHG 545

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVG 366
           + + AL+LF  M+   V  N +T  + +S C+    +  G+ +  S+ +  G    +   
Sbjct: 546 QAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHY 605

Query: 367 NSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
             ++ +  +   L +A + + D+        W ++++      +   A   F   +  ++
Sbjct: 606 TCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCII--HKNVALGRFSAEKILEI 663

Query: 426 PPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
            P   T  VL+S         + V L ++  +N  V++
Sbjct: 664 EPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRK 701



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 4/258 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           +G   EA++V   +        + TY ++L+AC  + SI  A ++H  +   T   D  +
Sbjct: 443 SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVI 502

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+  YAKCG + DA +VF+ + ER++ +W+A+I  Y+   +  + +ELF  M +  +
Sbjct: 503 GNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNV 562

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             +D  F  +L  C + G    G  L  S+ I  G+         ++ +  + G+L  A 
Sbjct: 563 ESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDAL 622

Query: 213 RFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           +F   +      + W +++S    I +N    R   +   E       T+ +L   Y   
Sbjct: 623 QFIGDIPSAPSAMVWRALLSSCI-IHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAA 681

Query: 272 GQCDVAMEMVKRMESLGI 289
           G  D    + K M ++G+
Sbjct: 682 GSLDQVALLRKSMRNIGV 699


>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial; Flags: Precursor
 gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 221/701 (31%), Positives = 359/701 (51%), Gaps = 61/701 (8%)

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           + GK+  AR+FF+S+  K   +WNS++SGYF  G   EA +LFD+M        VV++N 
Sbjct: 29  RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----NVVSWNG 84

Query: 264 LIRSY--NQLGQCDVAMEMVKRMESLGITPD--VFTWTCMISGFAQNGRTSQALDLFKEM 319
           L+  Y  N++        +V+      + P+  V +WT M+ G+ Q G   +A  LF  M
Sbjct: 85  LVSGYIKNRM--------IVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM 136

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
                  N V+ T       D   +    +++     M    DV+   ++I    +   +
Sbjct: 137 P----ERNEVSWTVMFGGLIDDGRIDKARKLYD----MMPVKDVVASTNMIGGLCREGRV 188

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
           + A  +FD +++++V +W +MI GY Q      A +LF  M E       ++W  ++ GY
Sbjct: 189 DEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGY 244

Query: 440 IQNGNEDEAVDLFQRM------------------GKNDKVKR--------NTASWNSLIA 473
             +G  ++A + F+ M                  G+  K +R        + A+W  +I 
Sbjct: 245 TLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIK 304

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
            Y++ G +  AL +F +MQ     P+  +++S+L  CA L +    +++H  ++R   + 
Sbjct: 305 AYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDD 364

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
            + V + L+  Y K G +V ++ +FD  SSKDII WNS+I GY  HG    AL +F +M 
Sbjct: 365 DVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP 424

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
           S G  PN+ T ++I+ A S AG ++ G ++F S+   + + P +EHYS  +D+ GR+G++
Sbjct: 425 SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQV 484

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIY 713
           ++AME IE M I+PD+++W ALL AC+ H  +DLA +A ++LF+ EP +     L+  I 
Sbjct: 485 DKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSIN 544

Query: 714 AICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP 773
           A   K  D   VRK  R N      G  WIEV   V+ F  GG        +   +    
Sbjct: 545 ASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKT 604

Query: 774 ENVTARSSHSGLC------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRM 827
           + +   + +S  C      ++EEEK +    HSE+LA+A+ L+   +    IR++KN+R+
Sbjct: 605 DGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGV-PIRVMKNLRV 663

Query: 828 CVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           C  CH   K +S +   EI L D+   HHF NG+CSC DYW
Sbjct: 664 CGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 140/502 (27%), Positives = 234/502 (46%), Gaps = 49/502 (9%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
           G++NEA    DS+  +       ++ +++     +     AR+L    + ++E +V    
Sbjct: 31  GKINEARKFFDSLQFKAI----GSWNSIVSGYFSNGLPKEARQL---FDEMSERNVVSWN 83

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ----- 150
            L+S Y K   + +AR VFE M ERN+ +W+AM+  Y ++    E   LF+ M +     
Sbjct: 84  GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143

Query: 151 -----DGLFPD----------DFLFPKILQACGNC--GDFEAGKLMHSLVIKLGMSCVRR 193
                 GL  D          D +  K + A  N   G    G++  + +I   M    R
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEM----R 199

Query: 194 VRNSV-----LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
            RN V     +  Y +  ++  AR+ FE M EK  V+W SM+ GY   G  ++A   F+ 
Sbjct: 200 ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEV 259

Query: 249 MCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR 308
           M  +     V+  N +I  + ++G+   A  +   ME      D  TW  MI  + + G 
Sbjct: 260 MPMKP----VIACNAMIVGFGEVGEISKARRVFDLMED----RDNATWRGMIKAYERKGF 311

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
             +ALDLF +M   GV P+  ++ S +S C  L +L  G ++H+  V+  F DDV V + 
Sbjct: 312 ELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASV 371

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           L+ MY KC EL  A+ VFD    KD+  WNS+I+GY   G   +A ++F +M  S   PN
Sbjct: 372 LMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPN 431

Query: 429 VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
            +T   +++     G  +E +++F+ M     V      ++  +    + GQ + A+ + 
Sbjct: 432 KVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMEL- 490

Query: 489 RKMQSSCFYPNCVTILSVLPAC 510
             ++S    P+     ++L AC
Sbjct: 491 --IESMTIKPDATVWGALLGAC 510



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 194/448 (43%), Gaps = 55/448 (12%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           ++  +    ID   I  ARKL+   +++   DV   T ++    + G +D+AR +F++MR
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLY---DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMR 199

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE-AGK 177
           ERN+ TW+ MI  Y ++ R     +LF +M +      +  +  +L      G  E A +
Sbjct: 200 ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEE 255

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
               + +K  ++C     N+++  + + G++  ARR F+ M+++D   W  MI  Y + G
Sbjct: 256 FFEVMPMKPVIAC-----NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKG 310

Query: 238 ENDEAHRLFDKMCREEIKLG-----------------------------------VVTFN 262
              EA  LF +M ++ ++                                     V   +
Sbjct: 311 FELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVAS 370

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
           +L+  Y + G+   A  +  R  S     D+  W  +ISG+A +G   +AL +F EM   
Sbjct: 371 VLMTMYVKCGELVKAKLVFDRFSS----KDIIMWNSIISGYASHGLGEEALKIFHEMPSS 426

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
           G MPN VT+ + ++AC+    L  G+EI  S+  K   T  V   +  ++M  +  +++ 
Sbjct: 427 GTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDK 486

Query: 382 A-ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
           A E +  M    D   W +++ G C+        E+  K    + P N  T+ +L S   
Sbjct: 487 AMELIESMTIKPDATVWGALL-GACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINA 545

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                 +   + + M  N+  K    SW
Sbjct: 546 SRSKWGDVAVVRKNMRTNNVSKFPGCSW 573



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 165/342 (48%), Gaps = 49/342 (14%)

Query: 370 INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           I+  S+  ++  A + FD ++ K + SWNS+++GY   G   +A +LF +M E     NV
Sbjct: 24  ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----NV 79

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
           ++WN L+SGYI+N    EA ++F+ M      +RN  SW +++ GY Q G    A  +F 
Sbjct: 80  VSWNGLVSGYIKNRMIVEARNVFELMP-----ERNVVSWTAMVKGYMQEGMVGEAESLFW 134

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN-----SLIDT 544
           +M       N V+   +      L+   ++ +       R L   +PV +     ++I  
Sbjct: 135 RMPER----NEVSWTVMFGG---LIDDGRIDKA------RKLYDMMPVKDVVASTNMIGG 181

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
             + G +  +R IFD M  ++++TW ++I GY  +     A  LF+ M     +    ++
Sbjct: 182 LCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSW 237

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
            S++L ++L+G ++  ++ F    E   + P+I   +AMI  +G  G++ +A     D+ 
Sbjct: 238 TSMLLGYTLSGRIEDAEEFF----EVMPMKPVIA-CNAMIVGFGEVGEISKARRVF-DLM 291

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            + D++ W  ++ A    G            F+LE  D+  Q
Sbjct: 292 EDRDNATWRGMIKAYERKG------------FELEALDLFAQ 321


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  359 bits (922), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 221/732 (30%), Positives = 362/732 (49%), Gaps = 80/732 (10%)

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           AR  F+ + +   V WN MI  Y   G   ++  L+  M +  +     TF  L+++ + 
Sbjct: 60  ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSS 119

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK------------- 317
           L    +   +      LG++ D++  T ++  +A+ G   QA  LF              
Sbjct: 120 LQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWN 179

Query: 318 --------------------EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
                               +M   GV PN  T+ S +       AL  G  IH+  ++ 
Sbjct: 180 AMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRN 239

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY------------- 404
            F D+V++  +L++MY+KC  L  A ++F+ +  K+   W++MI GY             
Sbjct: 240 FFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALY 299

Query: 405 -----------------------CQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
                                   Q     +  +L   M +S +  +    N LIS Y +
Sbjct: 300 DDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAK 359

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G  D AV     M     + ++T S++++I+G  Q G    AL +FR+MQSS   P   
Sbjct: 360 CGIMDNAVGFLDEM-----IAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLE 414

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           T++++LPAC++L A       HG  + R   +   + N++ID Y+K G I  SR IFD M
Sbjct: 415 TMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRM 474

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
            ++DII+WN++I GY +HG    AL LF ++++ GLKP+  T ++++ A S +G+V  GK
Sbjct: 475 QNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGK 534

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
             F S+++ + I P + HY  M+DL  R+G L+EA  FI+ MP  P+  IW ALL ACR 
Sbjct: 535 YWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRT 594

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H NI++     +++  L P       L+  IY+  G+ +DA  +R ++R +  + S G  
Sbjct: 595 HKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCS 654

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT-----ARSSHSGLCIEEEEKEEIS 796
           W+E+  +++ F+ G  S   S  +   LQ +   +      A SS     +EEEEKE+I 
Sbjct: 655 WVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLHDVEEEEKEQIL 714

Query: 797 GIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHH 856
             HSEK+A+AF ++ +S +   I + KN+R+CV CH   K+++++   EI + D+   HH
Sbjct: 715 LYHSEKVAIAFGILNTSPSSR-ILVTKNLRICVDCHSAIKFITLLTEREITVRDASRFHH 773

Query: 857 FKNGQCSCGDYW 868
           FK+G C+C D+W
Sbjct: 774 FKDGICNCQDFW 785



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 241/515 (46%), Gaps = 46/515 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFV 93
           +G   ++I +   +   G      T+  LL+AC    ++ L R +H   +++   +D++V
Sbjct: 85  SGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYV 144

Query: 94  KTKLLSVYAKCGCLDDAREVFEDM--RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            T LL +YAKCG L  A+ +F  +  ++R++  W+AMI A+S      + +     M Q 
Sbjct: 145 STALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQA 204

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+ P+      IL   G       GK +H+  I+        ++ ++L +Y KC  L +A
Sbjct: 205 GVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYA 264

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD------------------------ 247
           R+ F ++++K+ V W++MI GY       +A  L+D                        
Sbjct: 265 RKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQ 324

Query: 248 ------------KMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                        M +  + L     N LI  Y + G  D A+  +  M    I  D  +
Sbjct: 325 LTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEM----IAKDTVS 380

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           ++ +ISG  QNG   +AL +F++M   G+ P   T+ + + AC+ L AL  G   H   V
Sbjct: 381 YSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTV 440

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
             GFT+D  + N++I+MYSKC ++  +  +FD ++++D+ SWN+MI GY   G C +A  
Sbjct: 441 VRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALS 500

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           LF ++Q   + P+ +T   ++S    +G   E    F  M +N  +K   A +  ++   
Sbjct: 501 LFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLL 560

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            + G  + A    ++M    F PN     ++L AC
Sbjct: 561 ARAGNLDEAYTFIQRMP---FVPNVRIWGALLAAC 592



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 250/542 (46%), Gaps = 78/542 (14%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           AR VF+ + + ++  W+ MI  Y+    +++ + L+  M+Q G+ P +F FP +L+AC +
Sbjct: 60  ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSS 119

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM--DEKDGVAWN 227
               + G+L+H+    LG+S    V  ++L +Y KCG L  A+  F S+   ++D VAWN
Sbjct: 120 LQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWN 179

Query: 228 SMISGYF----------------QIGENDEAHRLFDKMCR----EEIKLGVVTFNILIRS 267
           +MI+ +                 Q G    +  L   +        +  G       IR+
Sbjct: 180 AMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRN 239

Query: 268 Y------------NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
           +            +   +C +     K   ++    DV  W+ MI G+  +   S AL L
Sbjct: 240 FFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDV-CWSAMIGGYVLHDSISDALAL 298

Query: 316 FKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
           + +M    G+ P   T+ + + AC  L  L  G ++H   +K G   D  VGNSLI+MY+
Sbjct: 299 YDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYA 358

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           KC  ++ A    D +  KD  S++++I+G  Q GY  KA  +F +MQ S + P + T   
Sbjct: 359 KCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIA 418

Query: 435 LIS---------------GY--IQNGNEDEA-----VDLFQRMGK-------NDKVK-RN 464
           L+                GY  ++    D +     +D++ + GK        D+++ R+
Sbjct: 419 LLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRD 478

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             SWN++I GY   G    AL +F+++Q+    P+ VT+++VL AC++   S  V E  G
Sbjct: 479 IISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSH---SGLVTE--G 533

Query: 525 CVLRRSLESSL---PVMNS---LIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYV 577
                S+  +    P M     ++D  A++GN+  + T    M    ++  W +L+    
Sbjct: 534 KYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACR 593

Query: 578 LH 579
            H
Sbjct: 594 TH 595



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 140/307 (45%), Gaps = 5/307 (1%)

Query: 46  DSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKC 104
           D +   G      T   +L+AC     +   +KLH   +    ++D  V   L+S+YAKC
Sbjct: 301 DMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKC 360

Query: 105 GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKIL 164
           G +D+A    ++M  ++  ++SA+I    ++    + + +F  M   G+ P       +L
Sbjct: 361 GIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALL 420

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
            AC +    + G   H   +  G +    + N+++ +Y KCGK+  +R  F+ M  +D +
Sbjct: 421 PACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDII 480

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           +WN+MI GY   G   EA  LF ++    +K   VT   ++ + +  G           M
Sbjct: 481 SWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSM 540

Query: 285 -ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
            ++  I P +  + CM+   A+ G   +A    + M FV   PN     + ++AC   K 
Sbjct: 541 SQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFV---PNVRIWGALLAACRTHKN 597

Query: 344 LAMGMEI 350
           + MG ++
Sbjct: 598 IEMGEQV 604



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 6/136 (4%)

Query: 551 IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA 610
           I  +R +FD +    ++ WN +I  Y   G +  ++ L+  M   G+ P   TF  ++ A
Sbjct: 57  IQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKA 116

Query: 611 HSLAGMVDLGKKVFCSITECYQIIPMIEHY--SAMIDLYGRSGKLEEAMEFIEDMPIEP- 667
            S    + LG+ +    T  + +   ++ Y  +A++ +Y + G L +A      +  +  
Sbjct: 117 CSSLQALQLGRLIH---THAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDR 173

Query: 668 DSSIWEALLTACRIHG 683
           D   W A++ A   H 
Sbjct: 174 DIVAWNAMIAAFSFHA 189


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  359 bits (921), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 225/738 (30%), Positives = 367/738 (49%), Gaps = 69/738 (9%)

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +Y + G L DA+ +F  ++      W+ MI  ++   ++   +  +  M+  G+ PD + 
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           FP +++AC      + GK++H  V  +G+     V +S++ +Y + G L  A+  F+++ 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------ 261
           +KD V WN M++GY + G++  A ++F +M   EIK   VTF                  
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180

Query: 262 -----------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFA 304
                            N L+  Y++  QC   ++  +++       D+ +W  +ISG+ 
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKC-QC---LQAARKLFDTLPQSDLVSWNGIISGYV 236

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           QNG   +A  LF+ M   G+ P+ +T  S +    +L +L    EIH   ++     DV 
Sbjct: 237 QNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVF 296

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
           + ++LI++Y KC ++E A++        D     +MI+GY   G   +A E F  + +  
Sbjct: 297 LKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQER 356

Query: 425 VPPNVITWNVL---------------ISGYIQNGNEDEA-------VDLFQRMGK----- 457
           + P  +T++ +               + G I     DE        +D++ + G+     
Sbjct: 357 MKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLAC 416

Query: 458 ---NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV 514
              N   +++   WNS+I    Q G+   A+ +FR+M       +CV+I   L ACA L 
Sbjct: 417 RVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLP 476

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
           A +  KEIHG +++  L S L   +SLID YAK GN+ +SR +FD M  K+ ++WNS+I 
Sbjct: 477 ALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIIS 536

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
            Y  HG     L LF +M   G++P+  TFL II A   AG VD G + +  +TE Y I 
Sbjct: 537 AYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIP 596

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER 694
             +EHY+ + D++GR+G+L EA E I  MP  PD+ +W  LL AC IHGN++LA +A + 
Sbjct: 597 ARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKH 656

Query: 695 LFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           LFDL+P +     L+  + A  GK    LKVR + +E   R   G  WIEV N  + FV 
Sbjct: 657 LFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFVA 716

Query: 755 GGWSESYSDLLYSWLQNV 772
              S   +  +YS L ++
Sbjct: 717 ADGSHPLTAQIYSVLDSL 734



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 163/645 (25%), Positives = 292/645 (45%), Gaps = 69/645 (10%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           G+ N A+     +   G    + T+  +++AC    S+ + + +H  +NL+  + DVFV 
Sbjct: 37  GQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVG 96

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           + L+ +YA+ G L DA+ +F+++ +++   W+ M+  Y ++      +++F  M    + 
Sbjct: 97  SSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIK 156

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+   F  +L  C +    + G  +H + +  G+     V N++LA+Y KC  L  AR+ 
Sbjct: 157 PNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKL 216

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ---L 271
           F+++ + D V+WN +ISGY Q G   EA  LF  M    IK   +TF   +   N+   L
Sbjct: 217 FDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSL 276

Query: 272 GQC--------------DVAM--------------EMVKRMESLGITPDVFTWTCMISGF 303
             C              DV +              EM ++      + D    T MISG+
Sbjct: 277 KHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGY 336

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
             NG+  +AL+ F+ +    + P  VT +S   A   L AL +G E+H   +K    +  
Sbjct: 337 VLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKC 396

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
            VG+++++MY+KC  L+ A RVF+ I +KD   WNSMI    Q G  G+A  LF +M   
Sbjct: 397 HVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGME 456

Query: 424 DVPPNVITWN--------------------VLISGYIQNG--NEDEAVDLFQRMGKNDKV 461
               + ++ +                    ++I G +++    E   +D++ + G  +  
Sbjct: 457 GTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFS 516

Query: 462 KR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
           +R        N  SWNS+I+ Y   G     L +F +M  +   P+ VT L ++ AC + 
Sbjct: 517 RRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHA 576

Query: 514 VASNK-VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNS 571
              ++ ++  H       + + +     + D + ++G +  +    + M    D   W +
Sbjct: 577 GQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGT 636

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSLAG 615
           L+    +HG  +  L        F L P N G +  ++LA+  AG
Sbjct: 637 LLGACHIHG--NVELAEVASKHLFDLDPLNSGYY--VLLANVQAG 677



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 178/376 (47%), Gaps = 23/376 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VF 92
           NG+  EA+     +  +  K    T+ ++  A     +++L ++LH  + + T++D    
Sbjct: 339 NGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSI-IKTKLDEKCH 397

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V + +L +YAKCG LD A  VF  + E++   W++MI + S++ R  E + LF  M  +G
Sbjct: 398 VGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEG 457

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
              D       L AC N      GK +H L+IK  +       +S++ +Y KCG L ++R
Sbjct: 458 TRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSR 517

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           R F+ M EK+ V+WNS+IS Y   G+  E   LF +M R  I+   VTF  +I +    G
Sbjct: 518 RVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAG 577

Query: 273 QCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           Q D  +     M E  GI   +  + C+   F + GR  +A +    M F    P+    
Sbjct: 578 QVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFP---PDAGVW 634

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS-----LINMYSKCEELEAAERVF 386
            + + AC     +   +E+  +A K  F  D L  NS     L N+ +   +     +V 
Sbjct: 635 GTLLGACH----IHGNVELAEVASKHLFDLDPL--NSGYYVLLANVQAGAGKWRKVLKVR 688

Query: 387 DMIKDKDV-----YSW 397
            ++K++ V     YSW
Sbjct: 689 SIMKERGVRKVPGYSW 704


>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 944

 Score =  359 bits (921), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 239/898 (26%), Positives = 423/898 (47%), Gaps = 92/898 (10%)

Query: 11  QLHSLLTKKSNPRF--RDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACI 68
           Q+H+   +  NP     ++ +         ++AI +  +I   G K  + T+  +L+AC 
Sbjct: 51  QIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACT 110

Query: 69  DSNSIHLARKLHAFLNLV---TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTW 125
            +   H    ++ + ++V    E DV++ T L+ ++ K GCLD+AR VF+ M  ++   W
Sbjct: 111 SALDFH--EGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCW 168

Query: 126 SAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK 185
           +AMI   S+     E +E+F+ M  +G   D      +  A    GD    K +H  V++
Sbjct: 169 NAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVR 228

Query: 186 LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRL 245
             +  V  V NS++ +Y KCG +  A+R F+ M  +D V+W +M++GY + G   E  +L
Sbjct: 229 RSICGV--VSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQL 286

Query: 246 FDKMCREEIKLG-----------------------------------VVTFNILIRSYNQ 270
             KM R  +K+                                    +V    ++  Y +
Sbjct: 287 LHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAK 346

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G+   A E+   +E      D+  W+  +S   + G   + L +F+ M + G+ P+   
Sbjct: 347 CGELKKARELFLSLEG----RDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAI 402

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
           ++  +S CT++  + +G  +H  A+K     D+ +  +L++MY + E    A  +F+ ++
Sbjct: 403 LSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQ 462

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS------------- 437
            KD+  WN++I G+ + G    A E+F ++Q S + P+  T   L S             
Sbjct: 463 IKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTC 522

Query: 438 ---GYIQNGNEDEA------VDLFQRMGKNDKVKR---------NTASWNSLIAGYQQLG 479
              G  ++G E +       +D++ + G    V+R         +  SWN +IAGY   G
Sbjct: 523 LHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNG 582

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
             N A+  FR+M+     PN VT +++LPA +YL    +    H C++R    S   + N
Sbjct: 583 YSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGN 642

Query: 540 SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
           SLID YAK G + YS   F  M +KD I+WN+++  Y +HG    A+ LF  M+   ++ 
Sbjct: 643 SLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRV 702

Query: 600 NRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEF 659
           +  +++S++ A   +G++  G  +F S+ E + + P +EHY+ M+DL G +G  +E +  
Sbjct: 703 DSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSL 762

Query: 660 IEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKP 719
           +  M  EPD+ +W ALL AC+IH N+ L  +A+  L  LEP + +   ++  IYA CG+ 
Sbjct: 763 LNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHHVVLSDIYAQCGRW 822

Query: 720 EDALKVRKLERENTRRNSFGQCWI-----EVKNLVYTFVTGGWSESYSDLLYSWLQNVPE 774
            DA + R     +  +   G  W+     E++            ES S+L  S  +   +
Sbjct: 823 NDARRTRSHINNHGLKKIPGYSWVGAHKNEMEKKPTRITMSCNHESASELTKSASKTAFD 882

Query: 775 NVTARSSHSGLCIEE--------EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
           N TA ++     + E         EK   +G+ S  L +   ++  S   H  + ++N
Sbjct: 883 NSTADNNFGNELVNEVFAELKDFHEKNASTGLESPTLLIIRKVVELSSYHHFGQFLQN 940



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 172/373 (46%), Gaps = 36/373 (9%)

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           LIN       L      F  IK+  +  +NS I  Y +  +  KA  L+  + +  + P+
Sbjct: 39  LINSCKYINPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPD 98

Query: 429 VITWNVLISG----------------YIQNGNEDEA------VDLFQRMGKNDKVK---- 462
             T+N ++                   + NG E +       +D+F +MG  D  +    
Sbjct: 99  KFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFD 158

Query: 463 ----RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
               ++   WN++I+G  Q      AL +F +MQ   F  + V+IL++ PA + L     
Sbjct: 159 KMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGC 218

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
            K IHG V+RRS+     V NSLID Y K G++  ++ +FD M  +D ++W +++ GYV 
Sbjct: 219 CKSIHGYVVRRSICGV--VSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVK 276

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           +G +   L L  +M+   +K N+   ++ +L  +    ++ GK+++    +   ++  I 
Sbjct: 277 NGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQ-MGLMSDIV 335

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID--LAVLAIERLF 696
             + ++ +Y + G+L++A E    +    D   W A L+A    G     L++  + +  
Sbjct: 336 VATPIVCMYAKCGELKKARELFLSLE-GRDLVAWSAFLSALVETGYPREVLSIFQVMQYE 394

Query: 697 DLEPGDVLIQRLI 709
            L+P   ++  L+
Sbjct: 395 GLKPDKAILSILV 407


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  358 bits (920), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 240/859 (27%), Positives = 412/859 (47%), Gaps = 129/859 (15%)

Query: 55  VRRNTYINLLQACIDSNSI-HLARK-----LHAFLNLVTEIDVFVKTKLLSVYAKCGCLD 108
           + +N +++L +    S SI HLA+      LH F N     D+ + TKL    +  G + 
Sbjct: 18  ISKNNFLDLFKR---STSISHLAQTHAQIVLHGFRN-----DISLLTKLTQRLSDLGAIY 69

Query: 109 DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF-FLMVQDGLFPDDFLFPKILQAC 167
            AR++F  ++  +++ ++ ++  +S ++     + +F  L     L P+   +   + A 
Sbjct: 70  YARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAA 129

Query: 168 GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
               D  AG ++H   I  G                 C              + + +  +
Sbjct: 130 SGFRDDRAGCVIHGQAIVDG-----------------C--------------DSELLLGS 158

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
           +++  YF+    ++A ++FD+M  +                                   
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMPEK----------------------------------- 183

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAM 346
               D   W  MISG+ +N    +++ +F+++ +      +  T+   + A  +L+ L +
Sbjct: 184 ----DTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRL 239

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           GM+IHSLA K G      V    I++YSKC +++ A  +F   +  D+ ++N+MI GY  
Sbjct: 240 GMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTS 299

Query: 407 AGYCGKAYELF--IKMQESDVPPNVITWNVLISGYI-----------------QNGNEDE 447
            G    +  LF  + +  + +  + +   V +SG++                        
Sbjct: 300 NGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFLSHTSVSTA 359

Query: 448 AVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
              ++ ++ +        ++  +++  SWN++I+GY Q G   +A+ +FR+MQ+S F PN
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPN 419

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
            VTI  +L ACA L A +  K +H  V     ESS+ V  +LI  YAK G+I  +R +FD
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD 479

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
            M  K+ +TWN++I GY LHG    AL +F +M + G+ P   TFL ++ A S AG+V  
Sbjct: 480 FMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKE 539

Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
           G ++F S+   Y   P ++HY+ ++D+ GR+G L+ A++FIE MPI+P  S+WE LL AC
Sbjct: 540 GDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGAC 599

Query: 680 RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFG 739
           RIH + +LA    E+LF+L+P +V    L+  I++       A  VR+  ++     + G
Sbjct: 600 RIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPG 659

Query: 740 QCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV----------PENVTARSSHSGLCIEE 789
              IE+    + F +G  S      ++  L+ +          PE   A        +EE
Sbjct: 660 YTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQPETELALHD-----VEE 714

Query: 790 EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
           EE+E +  +HSE+LA+AF LI +      IRI+KN+R+C+ CH   K +S +    I + 
Sbjct: 715 EERELMVKVHSERLAIAFGLIATEPGTE-IRIIKNLRVCLDCHTATKLISKITERVIVVR 773

Query: 850 DSKCLHHFKNGQCSCGDYW 868
           D+   HHFK+G CSCGDYW
Sbjct: 774 DANRFHHFKDGVCSCGDYW 792



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 143/308 (46%), Gaps = 12/308 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDV 91
           NG    ++++   +   GAK++ +T ++L+     S  + L   +H +    N ++   V
Sbjct: 300 NGETELSLSLFKELMLSGAKLKSSTLVSLVPV---SGHLMLIYAIHGYSLKSNFLSHTSV 356

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
              T L +VY+K   ++ AR++F++  E++L +W+AMI  Y+++    + + LF  M   
Sbjct: 357 --STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNS 414

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
              P+      IL AC   G    GK +H LV          V  +++ +Y KCG +  A
Sbjct: 415 EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEA 474

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           RR F+ M +K+ V WN+MISGY   G   EA  +F +M    I    VTF  ++ + +  
Sbjct: 475 RRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHA 534

Query: 272 GQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G      E+   M    G  P V  + C++    + G   +AL   + M    + P    
Sbjct: 535 GLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAMP---IQPGPSV 591

Query: 331 ITSAISAC 338
             + + AC
Sbjct: 592 WETLLGAC 599


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  358 bits (919), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 244/790 (30%), Positives = 377/790 (47%), Gaps = 94/790 (11%)

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRR-----VRNSVLAVYVKCGKLIWARRFFES 217
           IL AC +      GK +H LV++  +    R     + N V+ +Y++CG    A   F+ 
Sbjct: 16  ILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDR 75

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------------- 261
           M +++ VAW S+IS +   G   +A  LF KM    +    +TF                
Sbjct: 76  MKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDE 135

Query: 262 --------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                               N+++  Y + G  + A  +   ++     P+VF+WT +I+
Sbjct: 136 GKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQD----PNVFSWTIIIA 191

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK-MGFT 360
            +AQNG   + L L   M+  GV P+G T T+ + ACT + AL     +H+  +   G  
Sbjct: 192 AYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLD 251

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D  VG +LIN+Y KC  LE A  VF  I +KD+ SW+SMIA + Q+G    A +L + M
Sbjct: 252 RDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLM 311

Query: 421 QESDVPPNVITW-NVLIS---------------GYIQNGNEDEA------VDLFQRMGKN 458
               V PN +T+ NVL +                 +Q G  D+       V ++   G  
Sbjct: 312 DLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWV 371

Query: 459 DKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +  +        R+  SW+S+IAGY Q      AL +FR+M+     PN VT +S + AC
Sbjct: 372 ETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDAC 431

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
           A + A  +  ++H  V    L+  +PV  +L++ Y K G +  +  +F GM  K+++TW 
Sbjct: 432 AGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWT 491

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC 630
           S+   Y  +G    +L L   M+  G+KP+   F++I+++ + AG +  G   +  +T+ 
Sbjct: 492 SIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQD 551

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
           + I P +EH   M+D+ GR+GKLE A + I  M  E  S  W  LLTAC+ H +   A  
Sbjct: 552 FGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFE-SSLAWMMLLTACKAHNDTARAAR 610

Query: 691 AIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVY 750
           A E++F LEP +     L+  ++   G  E A + R+       +   G+  IE+ + V+
Sbjct: 611 AAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVH 670

Query: 751 TFVTGG-------WSESYSDL--LYSWLQN---VPENVTARSSHSGLCIEEEEKEEISGI 798
            FV            E ++ L  L   +Q    VP+    R       +EE  KE     
Sbjct: 671 EFVAASDVLPHHLVGEIFAALEKLGREMQGAGYVPDATAVRLRD----VEEGGKENAVPY 726

Query: 799 HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
           HSE LAL   +I S+ A   +RI KN+RMC  CH   K+VS + H  I + D +  HHF+
Sbjct: 727 HSEMLALGLGII-STPAGTPLRITKNLRMCSDCHIATKFVSKLVHRRISVRDGRRHHHFE 785

Query: 859 NGQCSCGDYW 868
           NG CSCGDYW
Sbjct: 786 NGVCSCGDYW 795



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/617 (24%), Positives = 281/617 (45%), Gaps = 84/617 (13%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEI------DVFVKTKLLSVYAKCGCLDDAREVFED 116
           +L AC D  ++   +++H  +   + +      +  ++  ++ +Y +CGC D A +VF+ 
Sbjct: 16  ILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDR 75

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKI-LQACGNCGDFEA 175
           M+++N+  W+++I A++    + + + LF  M+  G+ PD   F  I L+  G   + + 
Sbjct: 76  MKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDE 135

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           GK +HS +++ G    R V N V+ +Y KCG +  A   F+S+ + +  +W  +I+ Y Q
Sbjct: 136 GKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQ 195

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM----------- 284
            G   E  RL  +M +  +K    TF  ++ +   +G    A+E  K +           
Sbjct: 196 NGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVG----ALEEAKILHAATISSTGLD 251

Query: 285 --------------------ESLGI-----TPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
                               E+ G+       D+ +W+ MI+ FAQ+G+   A+ L   M
Sbjct: 252 RDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLM 311

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
              GV PN VT  + + A T LKA   G EIH+  V+ G++DDV + ++L+ MY     +
Sbjct: 312 DLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWV 371

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-- 437
           E A  +F+  +++DV SW+SMIAGY Q     +A  LF +M+   V PN +T+   I   
Sbjct: 372 ETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDAC 431

Query: 438 ---GYIQNGNE-----------------DEAVDLFQRMGKNDKV--------KRNTASWN 469
              G ++ G +                    V+L+ + G+ ++         K+N  +W 
Sbjct: 432 AGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWT 491

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           S+   Y Q G  + +L +   M+     P+ +  +++L +C Y  A    K +H   L  
Sbjct: 492 SIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNY--AGQMSKGLHYYNLMT 549

Query: 530 SLESSLPVMNS---LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
                 P +     ++D   ++G +  +  + + M  +  + W  L+     H     A 
Sbjct: 550 QDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTACKAHNDTARAA 609

Query: 587 DLFDQMKSFGLKPNRGT 603
              +++  F L+P   T
Sbjct: 610 RAAEKI--FQLEPKNAT 624



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 213/435 (48%), Gaps = 34/435 (7%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYIN-LLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           G   +A+ +   +   G    R T+ + LL+      ++   +++H+  +    E D  V
Sbjct: 95  GHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMV 154

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              ++ +Y KCG ++ A  VF+ +++ N+++W+ +I AY+++    EV+ L   M Q G+
Sbjct: 155 MNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGV 214

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVI-KLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD + F  +L AC   G  E  K++H+  I   G+     V  +++ +Y KCG L  A 
Sbjct: 215 KPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAF 274

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
             F  +D KD V+W+SMI+ + Q G+   A +L   M  E ++   VTF  ++ +   L 
Sbjct: 275 GVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLK 334

Query: 273 QCDVAMEMVKRMESLGITP-------------------------------DVFTWTCMIS 301
                 E+  R+   G +                                DV +W+ MI+
Sbjct: 335 AFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIA 394

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
           G++QN   ++AL LF+EM   GV PN VT  SAI AC  + AL  G ++H     +G   
Sbjct: 395 GYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDK 454

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           DV V  +L+N+Y KC  LE AE VF  +K K++ +W S+   Y Q G+  ++ +L   M+
Sbjct: 455 DVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGME 514

Query: 422 ESDVPPNVITWNVLI 436
              + P+ I +  ++
Sbjct: 515 LQGMKPDGIVFVAIL 529



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/522 (24%), Positives = 244/522 (46%), Gaps = 60/522 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VF 92
           NG   E + +L  +   G K    T+  +L AC    ++  A+ LHA     T +D    
Sbjct: 196 NGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRDAA 255

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V T L+++Y KCG L++A  VF  +  +++ +WS+MI A+++  + +  ++L  LM  +G
Sbjct: 256 VGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEG 315

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P++  F  +L+A  +   F+ GK +H+ +++ G S    + ++++ +Y   G +  AR
Sbjct: 316 VRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETAR 375

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
             FES  E+D V+W+SMI+GY Q      A  LF +M  + ++   VTF   I +   +G
Sbjct: 376 SIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVG 435

Query: 273 QCDVAMEMVKRMESLGITPDV-------------------------------FTWTCMIS 301
                 ++ +R+  LG+  DV                                TWT +  
Sbjct: 436 ALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAM 495

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK-MGFT 360
            + QNG  S++L L   M   G+ P+G+   + + +C     ++ G+  ++L  +  G  
Sbjct: 496 AYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIA 555

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA----GYCGKAYEL 416
             V     ++++  +  +LEAAE++ + +K +   +W  M+   C+A        +A E 
Sbjct: 556 PAVEHCGCMVDILGRAGKLEAAEQLINTMKFESSLAW-MMLLTACKAHNDTARAARAAEK 614

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM---------GKN-----DKVK 462
             +++    P N   + +L S +   G+ + A +  +RM         G++     D+V 
Sbjct: 615 IFQLE----PKNATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVH 670

Query: 463 RNTASWNSLIAGYQQLGQKNNAL-GVFRKMQSSCFYPNCVTI 503
              A+ + L   +  +G+   AL  + R+MQ + + P+   +
Sbjct: 671 EFVAASDVL--PHHLVGEIFAALEKLGREMQGAGYVPDATAV 710



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 98/187 (52%), Gaps = 10/187 (5%)

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRS-LESSLP----VMNSLIDTYAKSGNIVYSRTIFD 559
           ++L AC+ L A  + K +HG V+R S L+   P    + N +I  Y + G    +  +FD
Sbjct: 15  AILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFD 74

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS-LAGMVD 618
            M  ++++ W SLI  +   G +  A+ LF +M   G+ P+R TF SI+L  S     +D
Sbjct: 75  RMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLD 134

Query: 619 LGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
            GK+V   I +  Y+   M+   + ++++YG+ G +E+A    + +  +P+   W  ++ 
Sbjct: 135 EGKRVHSHIMQTGYEGDRMV--MNLVVEMYGKCGDVEQAGNVFDSIQ-DPNVFSWTIIIA 191

Query: 678 ACRIHGN 684
           A   +G+
Sbjct: 192 AYAQNGH 198


>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
          Length = 954

 Score =  358 bits (918), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 220/718 (30%), Positives = 368/718 (51%), Gaps = 80/718 (11%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           +LLQ C  S   HL++++H+ + +  +    F+  +++SVYA  G + DA+ VFE     
Sbjct: 39  DLLQQCSKS---HLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIE 95

Query: 121 ---NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
              NL  W++++ A        E +E++  M + G+  D F FP +++AC   G  +  +
Sbjct: 96  CFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCR 155

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H  V+++G      V N ++ +Y K G++                             
Sbjct: 156 SVHGHVVEMGFQWNLHVGNELMGMYGKIGRM----------------------------- 186

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
             D+A ++F++M         V++N ++  Y     C  A EM + M S G+ P++ TWT
Sbjct: 187 --DDARKVFERMAVRS----CVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWT 240

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            ++S  A+ G+  + ++LF  M   G+      +   +S   DL A   G  IH   VK 
Sbjct: 241 SLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKG 300

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           GF + + V NSLI +Y K   + AA  +F  IK K                         
Sbjct: 301 GFENYLFVKNSLICLYGKHGNVNAARILFLEIKTK------------------------- 335

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDK---VKRNTASWNSLIAG 474
                     N+++WN LIS Y   G  DEA  +F ++ K D+   V+ N  SW+++I G
Sbjct: 336 ----------NIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGG 385

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS 534
           +   GQ   AL +FR+MQ +    N VTI SVL  CA L A +  +EIHG V+R  ++ +
Sbjct: 386 FASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGN 445

Query: 535 LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
           + V N LI+ Y KSG+      +F+ + +KD+I+WN+++ GY +HG    A+  FDQM  
Sbjct: 446 ILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIK 505

Query: 595 FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLE 654
            G +P+  TF++++ A S AG+V  G+++F  + + +++ P +EHY+ M+DL GR+G L+
Sbjct: 506 DGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQ 565

Query: 655 EAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYA 714
           EA + ++ MP+EP++ +W ALL +CR+H N ++A     ++F+L         L+  IYA
Sbjct: 566 EASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYA 625

Query: 715 ICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
             G+ ED+ KVR   +    + + GQ WI+VK  VY F  G    +  + +Y  L+++
Sbjct: 626 ASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDL 683



 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 229/516 (44%), Gaps = 78/516 (15%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           +G   EA+ +   +   G      T+  +++AC    S  L R +H   + +  + ++ V
Sbjct: 113 HGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHV 172

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
             +L+ +Y K G +DDAR+VFE M  R+  +W+ M+  Y+ +       E+F +M   GL
Sbjct: 173 GNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGL 232

Query: 154 FPDDFLFPKILQACGNCGD-----------------------------------FEAGKL 178
            P+   +  +L +   CG                                    F+ GK+
Sbjct: 233 EPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKV 292

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H  V+K G      V+NS++ +Y K G +  AR  F  +  K+ V+WN+          
Sbjct: 293 IHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARILFLEIKTKNIVSWNA---------- 342

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG----ITPDVF 294
                                    LI SY  LG CD A  +  ++E       + P+V 
Sbjct: 343 -------------------------LISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVV 377

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +W+ +I GFA  G+  +AL+LF+ M    V  N VTI S +S C +L AL +G EIH   
Sbjct: 378 SWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHV 437

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           V+     ++LVGN LINMY+K    +    VF+ I++KD+ SWN+M+AGY   G    A 
Sbjct: 438 VRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAI 497

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
             F +M +    P+ +T+  ++S     G   E  +LF +M K  +V+     +  ++  
Sbjct: 498 RTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDL 557

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             + G    A  V + M      PN     ++L +C
Sbjct: 558 LGRAGLLQEASKVVKSMPVE---PNACVWGALLNSC 590


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 235/782 (30%), Positives = 387/782 (49%), Gaps = 72/782 (9%)

Query: 61  INLLQACIDSNSIHLARKLH--AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           + +L+ C+  + + L  ++H  A    +   D  ++T+L+ +Y       DA  VF  + 
Sbjct: 43  LAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLP 102

Query: 119 ERNL---YTWSAMIGAYSRDQRWREVVELFFLMV---QDGLFPDDFLFPKILQACGNCGD 172
                    W+ +I   +    +R  + LF+L +        PD   FP ++++C   G 
Sbjct: 103 RGAAACALPWNWLIRGLTMAGDYRSAL-LFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161

Query: 173 FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISG 232
              G+L+H     LG+     V ++++ +Y   G L  AR+ F+ M E+D V WN M+ G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 233 YFQIGENDEAHRLFDKM--------------------CREEIKLGVVTFNILIRSYNQLG 272
           Y + G    A  LF  M                       ++  GV    + ++ Y    
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVK-YGLES 280

Query: 273 QCDVAMEMVKRMES----------LGITP--DVFTWTCMISGFAQNGRTSQALDLFKEMS 320
           +  VA  +V                G+ P  D+ TW  MISG  QNG   QAL LF +M 
Sbjct: 281 EVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQ 340

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
             G+ P+ VT+ S + A TDL     G E+H   V+     DV + ++L+++Y KC  + 
Sbjct: 341 KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI---- 436
            A+ V+D  K  DV   ++MI+GY   G   +A ++F  + E  + PN +    ++    
Sbjct: 401 MAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACA 460

Query: 437 ------------SGYIQNGNEDEA------VDLFQRMGKND-------KVK-RNTASWNS 470
                       S  ++N  E         +D++ + G+ D       K+  ++  +WNS
Sbjct: 461 SMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNS 520

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +I+ + Q G+   AL +FR+M       + VTI SVL ACA L A    KEIHG V++  
Sbjct: 521 MISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGP 580

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           + + L   ++LID Y K GN+ ++  +F+ M  K+ ++WNS+I  Y  +G    ++ L  
Sbjct: 581 IRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLR 640

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
            M+  G K +  TFL+++ A + AG V  G ++F  +TE YQI P +EH++ M+DLY R+
Sbjct: 641 HMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRA 700

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           GKL++AME I DMP +PD+ IW ALL ACR+H N++LA +A + LF L+P +     L+ 
Sbjct: 701 GKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMS 760

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ 770
            I A+ G+ +   KVR+L ++   +   G  W++V N  + FV    S   S+ +Y  L+
Sbjct: 761 NINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLK 820

Query: 771 NV 772
           ++
Sbjct: 821 SI 822



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 177/636 (27%), Positives = 283/636 (44%), Gaps = 77/636 (12%)

Query: 58  NTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           +T+  ++++C    +I L R +H     L  + D+FV + L+ +YA  G L DAR+VF+ 
Sbjct: 147 HTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDG 206

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M ER+   W+ M+  Y +       VELF  M   G  P+       L       D   G
Sbjct: 207 MAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFG 266

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
             +H+L +K G+     V N+++++Y KC  L    + F  M   D V WN MISG  Q 
Sbjct: 267 VQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQN 326

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG-----------------QCDV--- 276
           G  D+A  LF  M +  I+   VT   L+ +   L                    DV   
Sbjct: 327 GFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLV 386

Query: 277 -----------AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
                      A+ M + +       DV   + MISG+  NG + +A+ +F+ +   G+ 
Sbjct: 387 SALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIR 446

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           PN V I S + AC  + A+ +G E+HS A+K  +     V ++L++MY+KC  L+ +  +
Sbjct: 447 PNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYI 506

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM-QESDVPPNVITWNVL--------- 435
           F  I  KD  +WNSMI+ + Q G   +A  LF +M  E     NV   +VL         
Sbjct: 507 FSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAI 566

Query: 436 -----ISGYIQNGN-------EDEAVDLFQRMGKNDKVKR--------NTASWNSLIAGY 475
                I G +  G        E   +D++ + G  +   R        N  SWNS+IA Y
Sbjct: 567 YYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASY 626

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
              G    ++ + R MQ   F  + VT L+++ ACA+   + +V+E  G  L R +    
Sbjct: 627 GAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAH---AGQVQE--GLRLFRCMTEEY 681

Query: 536 ---PVMNS---LIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLHGFWHAALDL 588
              P M     ++D Y+++G +  +  +   M  K D   W +L+    +H   +  L  
Sbjct: 682 QIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHR--NVELAE 739

Query: 589 FDQMKSFGLKP-NRGTFLSIILAHSLAGMVDLGKKV 623
               + F L P N G ++ +   +++AG  D   KV
Sbjct: 740 IASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKV 775



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 149/289 (51%), Gaps = 2/289 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG   EA+ +   +  QG +       ++L AC    ++ L ++LH++ L    E   +V
Sbjct: 427 NGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYV 486

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           ++ L+ +YAKCG LD +  +F  +  ++  TW++MI +++++    E + LF  M  +G+
Sbjct: 487 ESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGV 546

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
              +     +L AC +      GK +H +VIK  +       ++++ +Y KCG L WA R
Sbjct: 547 KYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHR 606

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            FESM EK+ V+WNS+I+ Y   G   E+  L   M  E  K   VTF  L+ +    GQ
Sbjct: 607 VFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQ 666

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
               + + + M E   I P +  + CM+  +++ G+  +A++L  +M F
Sbjct: 667 VQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPF 715


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 255/849 (30%), Positives = 422/849 (49%), Gaps = 81/849 (9%)

Query: 18  KKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLAR 77
           ++SN   +       C +G L EA   LD ++   + V    Y+  L+ C    ++   R
Sbjct: 44  RQSNQPVQVPSPKLACFDGVLTEAFQRLD-VSENNSPVEAFAYV--LELCGKRRAVSQGR 100

Query: 78  KLHA--FLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
           +LH+  F    + E+D F+  KL+ +Y KCG LDDA +VF++M +R  + W+ MIGAY  
Sbjct: 101 QLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
           +      + L++ M  +G+      FP +L+AC    D  +G  +HSL++KLG      +
Sbjct: 160 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI 219

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEK-DGVAWNSMISGYFQIGENDEAHRLFDKM---- 249
            N+++++Y K   L  ARR F+   EK D V WNS++S Y   G++ E   LF +M    
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279

Query: 250 ----------------------CREEIKLGVVTF----------NILIRSYNQLGQCDVA 277
                                   +EI   V+            N LI  Y + G+   A
Sbjct: 280 PAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQA 339

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
             ++++M +     DV TW  +I G+ QN    +AL+ F +M   G   + V++TS I+A
Sbjct: 340 ERILRQMNN----ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
              L  L  GME+H+  +K G+  ++ VGN+LI+MYSKC       R F  + DKD+ SW
Sbjct: 396 SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISW 455

Query: 398 NSMIAGYCQAGYCGKAYELFIK----------------MQESDVPPNV-----ITWNVLI 436
            ++IAGY Q     +A ELF                  ++ S V  ++     I  ++L 
Sbjct: 456 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 515

Query: 437 SGYIQNGNEDEAVDLFQR---MGKNDKV-----KRNTASWNSLIAGYQQLGQKNNALGVF 488
            G +    ++E VD++ +   MG   +V      ++  SW S+I+     G ++ A+ +F
Sbjct: 516 KGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELF 575

Query: 489 RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS--LESSLPVMNSLIDTYA 546
           R+M  +    + V +L +L A A L A NK +EIH  +LR+   LE S+ V  +++D YA
Sbjct: 576 RRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV--AVVDMYA 633

Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
             G++  ++ +FD +  K ++ + S+I  Y +HG   AA++LFD+M+   + P+  +FL+
Sbjct: 634 CCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLA 693

Query: 607 IILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
           ++ A S AG++D G+     +   Y++ P  EHY  ++D+ GR+  + EA EF++ M  E
Sbjct: 694 LLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 753

Query: 667 PDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR 726
           P + +W ALL ACR H   ++  +A +RL +LEP +     L+  ++A  G+  D  KVR
Sbjct: 754 PTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVR 813

Query: 727 KLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC 786
              + +      G  WIE+   V+ F     S   S  +Y  L  V   +        L 
Sbjct: 814 AKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREKGKRELA 873

Query: 787 IEEEEKEEI 795
            E   +E++
Sbjct: 874 REFNAREKM 882


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  358 bits (918), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 216/676 (31%), Positives = 356/676 (52%), Gaps = 23/676 (3%)

Query: 203 VKCGKLIWARRFFESMDEK-----DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           V+  ++  A+R    M+       D    N ++  Y + G+  +A  LFDKM    +K  
Sbjct: 33  VRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKM----LKRD 88

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
             ++N L+ +Y + G          RM       D  ++   I+GF+ N    ++L+LFK
Sbjct: 89  XFSWNALLSAYAKSGSIQNLKATFDRMP----FRDSVSYNTTIAGFSGNSCPQESLELFK 144

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
            M   G  P   TI S ++A   L  L  G +IH   +   F  +V + N+L +MY+KC 
Sbjct: 145 RMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCG 204

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           E+E A  +FD +  K++ SWN MI+GY + G   K   L  +M+ S   P+ +T + +I+
Sbjct: 205 EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIA 264

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
            Y Q G  DEA  +F    + D V      W +++ GY + G++ +AL +F +M      
Sbjct: 265 AYCQCGRVDEARRVFSEFKEKDIV-----CWTAMMVGYAKNGREEDALLLFNEMLLEHIE 319

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P+  T+ SV+ +CA L + +  + +HG  +   L ++L V ++LID Y+K G I  +R++
Sbjct: 320 PDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSV 379

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           F+ M ++++++WN++I G   +G    AL+LF+ M     KP+  TF+ I+ A      +
Sbjct: 380 FNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWI 439

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
           + G++ F SI+  + + P ++HY+ M++L GR+G++E+A+  I++M  +PD  IW  LL+
Sbjct: 440 EQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499

Query: 678 ACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNS 737
            C   G+I  A +A   LF+L+P   +   ++  +YA  G+ +D   VR L +    +  
Sbjct: 500 ICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKF 559

Query: 738 FGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEK 792
            G  WIE+ N V+ F +   +   S+ +Y  L  +      E  T  ++     + E+EK
Sbjct: 560 AGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEK 619

Query: 793 EEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
            +    HSEKLALAF LI        IRI+KNIR+C  CHE  K+ S +   +I L DS 
Sbjct: 620 FKSICFHSEKLALAFGLIKKPNGISPIRIIKNIRICNDCHEFMKFASRIIGRQIILRDSN 679

Query: 853 CLHHFKNGQCSCGDYW 868
             HHF  G+CSC D W
Sbjct: 680 RFHHFSTGKCSCNDNW 695



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 193/361 (53%), Gaps = 9/361 (2%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D F    LLS YAK G + + +  F+ M  R+  +++  I  +S +   +E +ELF  M 
Sbjct: 88  DXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQ 147

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           ++G  P ++    IL A     D   GK +H  +I         + N++  +Y KCG++ 
Sbjct: 148 REGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEIE 207

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            AR  F+ + +K+ V+WN MISGY + G+ ++   L  +M         VT + +I +Y 
Sbjct: 208 QARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTMSTIIAAYC 267

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           Q G+ D A    +R+ S     D+  WT M+ G+A+NGR   AL LF EM    + P+  
Sbjct: 268 QCGRVDEA----RRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSY 323

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           T++S +S+C  L +L  G  +H  ++  G  +++LV ++LI+MYSKC  ++ A  VF+++
Sbjct: 324 TLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLM 383

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-----YIQNGN 444
             ++V SWN+MI G  Q G+   A ELF  M +    P+ +T+  ++S      +I+ G 
Sbjct: 384 PTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQ 443

Query: 445 E 445
           E
Sbjct: 444 E 444



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 158/317 (49%), Gaps = 16/317 (5%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D    + +++ Y +CG +D+AR VF + +E+++  W+AM+  Y+++ R  + + LF  M+
Sbjct: 255 DQVTMSTIIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEML 314

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            + + PD +    ++ +C        G+ +H   I  G++    V ++++ +Y KCG + 
Sbjct: 315 LEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFID 374

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            AR  F  M  ++ V+WN+MI G  Q G + +A  LF+ M +++ K   VTF  ++ +  
Sbjct: 375 DARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACL 434

Query: 270 QLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
                +   E    + +  G+TP +  + CM++   + GR  QA+ L K M+     P+ 
Sbjct: 435 HCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHD---PDF 491

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI---NMYSKCEELEAAERV 385
           +  ++ +S C+  K   +  E+   A +  F  D  +    I   NMY+     +    V
Sbjct: 492 LIWSTLLSICST-KGDIVNAEV---AARHLFELDPTIAVPYIMLSNMYASMGRWKDVASV 547

Query: 386 FDMIKDKDV-----YSW 397
            +++K K+V     +SW
Sbjct: 548 RNLMKSKNVKKFAGFSW 564



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/422 (23%), Positives = 181/422 (42%), Gaps = 82/422 (19%)

Query: 24  FRD-----THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARK 78
           FRD     T +    GN    E++ +   +  +G +    T +++L A      +   ++
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQ 176

Query: 79  LHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 137
           +H  + +   + +VF+   L  +YAKCG ++ AR +F+ + ++NL +W+ MI  Y+++ +
Sbjct: 177 IHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQ 236

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
             + + L   M   G  PD                            ++ MS       +
Sbjct: 237 PEKCIGLLHQMRLSGHMPD----------------------------QVTMS-------T 261

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK-- 255
           ++A Y +CG++  ARR F    EKD V W +M+ GY + G  ++A  LF++M  E I+  
Sbjct: 262 IIAAYCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPD 321

Query: 256 ----------------------------LGVVTFNILIRS-----YNQLGQCDVAMEMVK 282
                                       L  +  N+L+ S     Y++ G  D A  +  
Sbjct: 322 SYTLSSVVSSCAKLASLHHGQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFN 381

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
            M     T +V +W  MI G AQNG    AL+LF+ M      P+ VT    +SAC    
Sbjct: 382 LMP----TRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCN 437

Query: 343 ALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEELE-AAERVFDMIKDKDVYSWNSM 400
            +  G E   S++ + G T  +     ++N+  +   +E A   + +M  D D   W+++
Sbjct: 438 WIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTL 497

Query: 401 IA 402
           ++
Sbjct: 498 LS 499


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  358 bits (918), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 261/893 (29%), Positives = 413/893 (46%), Gaps = 102/893 (11%)

Query: 59   TYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
            T+I  L AC    S+     LH+ L+      D      L+++Y KCG  + A  VF+ M
Sbjct: 235  TFITALGAC---TSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAM 291

Query: 118  RER---NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG-DF 173
              R   +L +W+AMI A     R  + + +F  +  +G+ P+      IL A    G DF
Sbjct: 292  ASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDF 351

Query: 174  EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK-DGVAWNSMISG 232
             A +  H  + + G      V N+++++Y KCG    A   F  +  K D ++WN+M+  
Sbjct: 352  GAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGA 411

Query: 233  -------------------------------YFQIGENDEA-------HRLFDKMCREEI 254
                                                 N EA       H L     R+ +
Sbjct: 412  SEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYV 471

Query: 255  KLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
            +  V T  +L+  Y + G    A  + K M     +  + TW  M+  +AQN R+ +A  
Sbjct: 472  ESSVAT--MLVSMYGKCGSIAEAELVFKEMPL--PSRSLVTWNVMLGAYAQNDRSKEAFG 527

Query: 315  LFKEMSFVGVMPNGVTITSAISAC-TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
               EM   GV+P+ ++ TS +S+C    +A  + M I    ++ G+    L   +LI+M+
Sbjct: 528  ALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCI----LESGYRSACL-ETALISMH 582

Query: 374  SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW- 432
             +C ELE A  VFD +   DV SW +M++   +     + + LF +MQ   V P+  T  
Sbjct: 583  GRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLA 642

Query: 433  ----------------------------------NVLISGYIQNGNEDEAVDLFQRMGKN 458
                                              N L++ Y   G+  EA+  F+ M   
Sbjct: 643  TTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKAR 702

Query: 459  DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
            D V     SWN + A Y Q G    A+ +FR MQ     P+ +T  + L         + 
Sbjct: 703  DLV-----SWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSD 757

Query: 519  VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
             K  HG      L+S + V   L+  YAK G +  + ++F G     ++  N++I     
Sbjct: 758  GKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQ 817

Query: 579  HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
            HGF   A+ +F +M+  G++P+  T +SII A   AGMV+ G   F ++ E + I P +E
Sbjct: 818  HGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLE 877

Query: 639  HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
            HY+  +DL GR+G+LE A + I  MP E ++ +W +LL  C++ G+ +L     +R+ +L
Sbjct: 878  HYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILEL 937

Query: 699  EPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS 758
            +P +     ++  IY   GK +DA   RK   +   +N+ G  W+E+   V+ FV G  S
Sbjct: 938  DPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRS 997

Query: 759  ESYSDLLYSWLQNVPENVTARSSH---SGLCIEEEEKEEISGIHSEKLALAFALIGSSQA 815
               +D +Y  L  + E +  R+ +    GL  E+E KE+  G HSE++A+AF LI ++  
Sbjct: 998  HPQTDEIYVVLDKL-ELLMRRAGYEADKGLDAEDELKEKALGYHSERIAIAFGLI-ATPP 1055

Query: 816  PHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              T++IVKN+R+C  CH   KY+SM+   EI + DS   HHF NG CSC D W
Sbjct: 1056 DTTLKIVKNLRVCGDCHTATKYISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 169/681 (24%), Positives = 306/681 (44%), Gaps = 86/681 (12%)

Query: 60  YINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           Y  LLQ+C+DSN +   ++ H  + N   E  +F+   L+++Y +CG L++A  +F  M 
Sbjct: 28  YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELF-FLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
           ERN+ +W+A+I A ++   +     LF  ++++    P+ +    +L AC N  D   G+
Sbjct: 88  ERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 178 LMHSLVIKLGM----SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
            +H+++ +LG+    +    V N+++ +Y KCG    A   F ++ EKD V+W +M   Y
Sbjct: 148 SIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAY 207

Query: 234 FQIGE-NDEAHRLFDKMCREEIKLGVVTF------------------------------- 261
            Q      +A R+F +M  + +   V+TF                               
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEAGLGFDPLA 267

Query: 262 -NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
            N LI  Y + G  + A  + K M S     D+ +W  MIS   + GR   A+ +F+ + 
Sbjct: 268 GNALINMYGKCGDWEGAYGVFKAMASRQ-ELDLVSWNAMISASVEAGRHGDAMAIFRRLR 326

Query: 321 FVGVMPNGVTITSAISACTDLKA-LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
             G+ PN VT+ + ++A            + H    + G+  DV+VGN++I+MY+KC   
Sbjct: 327 LEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFF 386

Query: 380 EAAERVFDMIKDK-DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------ 432
            AA  VF  I+ K DV SWN+M+         GK    F  M  + + PN +++      
Sbjct: 387 SAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNA 446

Query: 433 ------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                          +L+S Y + G+  EA  +F+ M       
Sbjct: 447 CSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEM---PLPS 503

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
           R+  +WN ++  Y Q  +   A G   +M      P+ ++  SVL +C     S + + +
Sbjct: 504 RSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC---YCSQEAQVL 560

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
             C+L     S+  +  +LI  + +   +  +R++FD M   D+++W +++     +  +
Sbjct: 561 RMCILESGYRSAC-LETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDF 619

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
                LF +M+  G+ P++ T  + +     +  + LGK +   +TE   +   I   +A
Sbjct: 620 KEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTE-IGLEADIAVENA 678

Query: 643 MIDLYGRSGKLEEAMEFIEDM 663
           ++++Y   G   EA+ F E M
Sbjct: 679 LLNMYSNCGDWREALSFFETM 699



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 161/676 (23%), Positives = 303/676 (44%), Gaps = 83/676 (12%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-----LNLVTEIDVFVKTKLLSVYAKCGCLDDAREV 113
           T + +L AC +S  + + R +HA      L   +     V   ++++YAKCG  +DA  V
Sbjct: 129 TLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAV 188

Query: 114 FEDMRERNLYTWSAMIGAYSRDQR-WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD 172
           F  + E+++ +W+AM GAY++++R + + + +F  M+   L P+   F   + A G C  
Sbjct: 189 FLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITF---ITALGACTS 245

Query: 173 FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM---DEKDGVAWNSM 229
              G  +HSL+ + G+       N+++ +Y KCG    A   F++M    E D V+WN+M
Sbjct: 246 LRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAM 305

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------------------------- 261
           IS   + G + +A  +F ++  E ++   VT                             
Sbjct: 306 ISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESG 365

Query: 262 --------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
                   N +I  Y + G    A  + +R+       DV +W  M+          + +
Sbjct: 366 YLRDVVVGNAIISMYAKCGFFSAAWTVFRRIR---WKCDVISWNTMLGASEDRKSFGKVV 422

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV--KMGFTDDVLVGNSLIN 371
           + F  M   G+ PN V+  + ++AC++ +AL  G +IHSL +  +  + +   V   L++
Sbjct: 423 NTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESS-VATMLVS 481

Query: 372 MYSKCEELEAAERVFD--MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           MY KC  +  AE VF    +  + + +WN M+  Y Q     +A+   ++M +  V P+ 
Sbjct: 482 MYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDA 541

Query: 430 ITWN------------------VLISGYIQNGNEDEAVDLFQRMGKNDKVKR-------- 463
           +++                   +L SGY     E   + +  R  + ++ +         
Sbjct: 542 LSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFDEMDHG 601

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           +  SW ++++   +         +FR+MQ     P+  T+ + L  C         K IH
Sbjct: 602 DVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIH 661

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
            CV    LE+ + V N+L++ Y+  G+   + + F+ M ++D+++WN +   Y   G   
Sbjct: 662 ACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAK 721

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            A+ LF  M+  G+KP++ TF + +     + +V  G K+F  +     +   +   + +
Sbjct: 722 EAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDG-KLFHGLAAESGLDSDVSVATGL 780

Query: 644 IDLYGRSGKLEEAMEF 659
           + LY + GKL+EA+  
Sbjct: 781 VKLYAKCGKLDEAISL 796



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 134/488 (27%), Positives = 233/488 (47%), Gaps = 50/488 (10%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N LI  Y + G  + A  +  +ME      +V +WT +IS  AQ+G  ++A  LF+ M  
Sbjct: 64  NCLINMYVRCGSLEEAHAIFSKMEE----RNVVSWTALISANAQSGAFARAFALFRTMLL 119

Query: 322 -VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF----TDDVLVGNSLINMYSKC 376
                PN  T+ + ++AC + + LA+G  IH++  ++G     T   LVGN++INMY+KC
Sbjct: 120 ESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKC 179

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAG-YCGKAYELFIKMQESDVPPNVITW--- 432
              E A  VF  I +KDV SW +M   Y Q   +   A  +F +M    + PNVIT+   
Sbjct: 180 GSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITA 239

Query: 433 -----------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
                                        N LI+ Y + G+ + A  +F+ M    ++  
Sbjct: 240 LGACTSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQEL-- 297

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA-CAYLVASNKVKEI 522
           +  SWN++I+   + G+  +A+ +FR+++     PN VT++++L A  A  V     ++ 
Sbjct: 298 DLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKF 357

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLHGF 581
           HG +        + V N++I  YAK G    + T+F  +  K D+I+WN+++        
Sbjct: 358 HGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKS 417

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
           +   ++ F  M   G+ PN+ +F++I+ A S +  +D G+K+   I    +        +
Sbjct: 418 FGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVAT 477

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSI-WEALLTACRIHGNIDLAVLAIERLFDLEP 700
            ++ +YG+ G + EA    ++MP+   S + W  +L A   +   D +  A   L ++  
Sbjct: 478 MLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGA---YAQNDRSKEAFGALMEMLQ 534

Query: 701 GDVLIQRL 708
           G VL   L
Sbjct: 535 GGVLPDAL 542



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 128/500 (25%), Positives = 230/500 (46%), Gaps = 54/500 (10%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTE--IDVFVKTKLLSVYAKCGCLDD 109
           G    + ++I +L AC +S ++   RK+H+ +       ++  V T L+S+Y KCG + +
Sbjct: 432 GIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAE 491

Query: 110 AREVFEDM--RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC 167
           A  VF++M    R+L TW+ M+GAY+++ R +E       M+Q G+ PD   F  +L +C
Sbjct: 492 AELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC 551

Query: 168 GNCGDFEAGKLMHSLVIKLGM--SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA 225
             C   +  +++   +++ G   +C   +  ++++++ +C +L  AR  F+ MD  D V+
Sbjct: 552 -YCS--QEAQVLRMCILESGYRSAC---LETALISMHGRCRELEQARSVFDEMDHGDVVS 605

Query: 226 WNSMISGYFQIGENDEAHRLFDKM------------------CREEIKLG---------- 257
           W +M+S   +  +  E H LF +M                  C +   LG          
Sbjct: 606 WTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVT 665

Query: 258 -------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTS 310
                  +   N L+  Y+  G    A+   + M++     D+ +W  M + +AQ G   
Sbjct: 666 EIGLEADIAVENALLNMYSNCGDWREALSFFETMKA----RDLVSWNIMSAAYAQAGLAK 721

Query: 311 QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI 370
           +A+ LF+ M   GV P+ +T ++ ++       ++ G   H LA + G   DV V   L+
Sbjct: 722 EAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLV 781

Query: 371 NMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
            +Y+KC +L+ A  +F       V   N++I    Q G+  +A ++F KMQ+  V P+V 
Sbjct: 782 KLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVA 841

Query: 431 TWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
           T   +IS     G  +E    F  M +   +      +   +    + GQ  +A  + RK
Sbjct: 842 TLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRK 901

Query: 491 MQSSCFYPNCVTILSVLPAC 510
           M    F  N +   S+L  C
Sbjct: 902 MP---FEDNTLVWTSLLGTC 918



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 176/393 (44%), Gaps = 56/393 (14%)

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           T+ + +C D   LA G   H L    G    + +GN LINMY +C  LE A  +F  +++
Sbjct: 29  TALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE 88

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKM-QESDVPPNVIT------------------- 431
           ++V SW ++I+   Q+G   +A+ LF  M  ES   PN  T                   
Sbjct: 89  RNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRS 148

Query: 432 -----W---------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                W               N +I+ Y + G+ ++A+ +F  + + D V     SW ++
Sbjct: 149 IHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVV-----SWTAM 203

Query: 472 IAGYQQLGQ-KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
              Y Q  +   +AL +FR+M      PN +T ++ L AC  L        +H  +    
Sbjct: 204 AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSL---RDGTWLHSLLHEAG 260

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK---DIITWNSLICGYVLHGFWHAALD 587
           L       N+LI+ Y K G+   +  +F  M+S+   D+++WN++I   V  G    A+ 
Sbjct: 261 LGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMA 320

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG--KKVFCSITECYQIIPMIEHYSAMID 645
           +F +++  G++PN  T ++I+ A + +G VD G  +K    I E   +  ++   +A+I 
Sbjct: 321 IFRRLRLEGMRPNSVTLITILNALAASG-VDFGAARKFHGRIWESGYLRDVVVG-NAIIS 378

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           +Y + G    A      +  + D   W  +L A
Sbjct: 379 MYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGA 411


>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
 gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
          Length = 706

 Score =  358 bits (918), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 234/776 (30%), Positives = 370/776 (47%), Gaps = 106/776 (13%)

Query: 102 AKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFP 161
           A+ G ++ AR  FE M  R   +++A++  Y R++     + LF  M    L   + L  
Sbjct: 28  ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALIS 87

Query: 162 KILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK 221
            +        D  A   + S+     +        S+L  YV+ G L  A R F+ M E+
Sbjct: 88  GLSLRRQTLPD--AAAALASIPFPPSVVSF----TSLLRGYVRHGLLADAIRLFQQMPER 141

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMV 281
           + V++  ++ G    G  +EA RLFD                               EM 
Sbjct: 142 NHVSYTVLLGGLLDAGRVNEARRLFD-------------------------------EMP 170

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
            R        DV  WT M+SG+ Q GR ++A  LF EM                      
Sbjct: 171 DR--------DVVAWTAMLSGYCQAGRITEARALFDEMP--------------------- 201

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
                               +V+   ++I+ Y++  E+  A ++F+++ +++  SW +M+
Sbjct: 202 ------------------KRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAML 243

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
            GY QAG+   A ELF  M E  V       N ++ G+ Q G  D A  +F++M      
Sbjct: 244 VGYIQAGHVEDAAELFNAMPEHPV----AACNAMMVGFGQRGMVDAAKTVFEKM-----C 294

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
           +R+  +W+++I  Y+Q      AL  FR+M      PN  +++S+L  CA L   +  +E
Sbjct: 295 ERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGRE 354

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           +H  +LR S +  +  +++LI  Y K GN+  ++ +F     KDI+ WNS+I GY  HG 
Sbjct: 355 VHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGL 414

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
              AL +F  M+  G+ P+  T++  + A S  G V  G+++F S+T    I P  EHYS
Sbjct: 415 GEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYS 474

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            M+DL GRSG +EEA + I++MP+EPD+ IW AL+ ACR+H N ++A  A ++L +LEPG
Sbjct: 475 CMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPG 534

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
           +     L+  IY   G+ EDA K+RK         S G  WIE    V+ F +G   +  
Sbjct: 535 NAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSG---DVL 591

Query: 762 SDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGS 812
           +   ++ +  + E +      SG           I+EE+K      HSE+ A+A+ L+  
Sbjct: 592 AHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKI 651

Query: 813 SQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +    IR++KN+R+C  CH   K ++ +   EI L D+   HHFK+G CSC DYW
Sbjct: 652 PEG-MPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 194/457 (42%), Gaps = 94/457 (20%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           +Y  LL   +D+  ++ AR+L    + + + DV   T +LS Y + G + +AR +F++M 
Sbjct: 145 SYTVLLGGLLDAGRVNEARRL---FDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMP 201

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           +RN+ +W+AMI  Y+++       +LF +M +                            
Sbjct: 202 KRNVVSWTAMISGYAQNGEVNLARKLFEVMPE---------------------------- 233

Query: 179 MHSLVIKLGMSCVRRVRNSV-----LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
                           RN V     L  Y++ G +  A   F +M E    A N+M+ G+
Sbjct: 234 ----------------RNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGF 277

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
            Q G  D A  +F+KMC                                         D 
Sbjct: 278 GQRGMVDAAKTVFEKMCER---------------------------------------DD 298

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            TW+ MI  + QN    +AL  F+EM + GV PN  ++ S ++ C  L  L  G E+H+ 
Sbjct: 299 GTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAA 358

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            ++  F  DV   ++LI MY KC  L+ A+RVF   + KD+  WNSMI GY Q G   +A
Sbjct: 359 MLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQA 418

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
             +F  M+ + + P+ IT+   ++     G   E  ++F  M  N  ++     ++ ++ 
Sbjct: 419 LGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVD 478

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
              + G    A  + + M      P+ V   +++ AC
Sbjct: 479 LLGRSGLVEEAFDLIKNMPVE---PDAVIWGALMGAC 512



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 150/337 (44%), Gaps = 40/337 (11%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFL------- 83
           C  GR+ EA  + D +       +RN  ++  ++     +  ++LARKL   +       
Sbjct: 185 CQAGRITEARALFDEMP------KRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVS 238

Query: 84  ---------------------NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
                                N + E  V     ++  + + G +D A+ VFE M ER+ 
Sbjct: 239 WTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDD 298

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            TWSAMI AY +++   E +  F  M+  G+ P+      IL  C      + G+ +H+ 
Sbjct: 299 GTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAA 358

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           +++          ++++ +Y+KCG L  A+R F + + KD V WNSMI+GY Q G  ++A
Sbjct: 359 MLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQA 418

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMIS 301
             +F  M    +    +T+   + + +  G+     E+   M  +  I P    ++CM+ 
Sbjct: 419 LGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVD 478

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
              ++G   +A DL K M    V P+ V   + + AC
Sbjct: 479 LLGRSGLVEEAFDLIKNMP---VEPDAVIWGALMGAC 512



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/396 (20%), Positives = 165/396 (41%), Gaps = 82/396 (20%)

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV- 425
           N+ I   ++   +E A   F+ +  +   S+N+++AGY +      A  LF +M   D+ 
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 426 ----------------------------PPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
                                       PP+V+++  L+ GY+++G   +A+ LFQ+M +
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 458 NDKVK--------------------------RNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            + V                           R+  +W ++++GY Q G+   A  +F +M
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200

Query: 492 QS----------SCFYPN-----CVTILSVLPA------CAYLVASNKVKEIHGC--VLR 528
                       S +  N        +  V+P        A LV   +   +     +  
Sbjct: 201 PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFN 260

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
              E  +   N+++  + + G +  ++T+F+ M  +D  TW+++I  Y  + F   AL  
Sbjct: 261 AMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALST 320

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F +M   G++PN  + +SI+   +   ++D G++V  ++  C   + +    SA+I +Y 
Sbjct: 321 FREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFA-VSALITMYI 379

Query: 649 RSGKLEEAMEFIEDMPIEP-DSSIWEALLTACRIHG 683
           + G L++A         EP D  +W +++T    HG
Sbjct: 380 KCGNLDKAKRVFHT--FEPKDIVMWNSMITGYAQHG 413



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 116/255 (45%), Gaps = 4/255 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           N  L EA++    +  +G +    + I++L  C     +   R++HA  L    ++DVF 
Sbjct: 311 NEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFA 370

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+++Y KCG LD A+ VF     +++  W++MI  Y++     + + +F  M   G+
Sbjct: 371 VSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGM 430

Query: 154 FPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   +   L AC   G  + G+ + +S+ +   +       + ++ +  + G +  A 
Sbjct: 431 SPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAF 490

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
              ++M  E D V W +++ G  ++  N E      K   E        + +L   Y  +
Sbjct: 491 DLIKNMPVEPDAVIWGALM-GACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSV 549

Query: 272 GQCDVAMEMVKRMES 286
           G+ + A +M K + S
Sbjct: 550 GRWEDASKMRKFISS 564



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 18/200 (9%)

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           N+ I   A++GNI  +R  F+ M  +   ++N+L+ GY  +    AAL LF +M S  L 
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDL- 79

Query: 599 PNRGTFLSIILAHSL-AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
               ++ ++I   SL    +        SI       P +  +++++  Y R G L +A+
Sbjct: 80  ---ASYNALISGLSLRRQTLPDAAAALASIP----FPPSVVSFTSLLRGYVRHGLLADAI 132

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG-DVLIQRLILQIYAIC 716
              + MP E +   +  LL      G ++ A     RLFD  P  DV+    +L  Y   
Sbjct: 133 RLFQQMP-ERNHVSYTVLLGGLLDAGRVNEA----RRLFDEMPDRDVVAWTAMLSGYCQA 187

Query: 717 GKPEDALKVRKLERENTRRN 736
           G+  +A   R L  E  +RN
Sbjct: 188 GRITEA---RALFDEMPKRN 204


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  358 bits (918), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 243/857 (28%), Positives = 407/857 (47%), Gaps = 89/857 (10%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           +V++ T LL +Y   G + +A+ +F +M +RN+ +W+A++ A S +    E +  +  M 
Sbjct: 78  NVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMR 137

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           ++G+  +      ++  CG   D  AG  + + V+  G+     V NS++ ++    ++ 
Sbjct: 138 KEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQ 197

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------- 261
            A R F+ M+E+D ++WN+MIS Y       +   +   M   E+K  V T         
Sbjct: 198 DAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCA 257

Query: 262 ---------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                                      N L+  Y+  G+ D A  + + M       DV 
Sbjct: 258 SSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSR----RDVI 313

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGV-MPNGVTITSAISACTDLKALAMGMEIHSL 353
           +W  MIS + Q+    +AL+   ++       PN +T +SA+ AC+  +AL  G  IH++
Sbjct: 314 SWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAM 373

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            ++    + +L+GNSL+ MYSKC  +E  ERVF+ +   DV S N +  GY        A
Sbjct: 374 ILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANA 433

Query: 414 YELFIKMQESDVPPNVITW------------------------------------NVLIS 437
             +F  M+ + + PN IT                                     N LI+
Sbjct: 434 MRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLIT 493

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
            Y   G+ + +  +F R+       ++  SWN++IA   + G+   A+ +F   Q +   
Sbjct: 494 MYATCGDLESSTGIFSRINN-----KSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNK 548

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
            +   +   L + A L +  +  ++HG  ++  L+    V+N+ +D Y K G +      
Sbjct: 549 LDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKT 608

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
               + +    WN+LI GY  +G++  A D F  M S G KP+  TF++++ A S AG++
Sbjct: 609 LPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLI 668

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
           D G   + S+   + + P I+H   ++DL GR GK  EA +FI++MP+ P+  IW +LL+
Sbjct: 669 DKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLS 728

Query: 678 ACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNS 737
           + R H N+D+   A + L +L+P D     L+  +YA   +  D  K+R    +  + N 
Sbjct: 729 SSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRS-HMKTIKLNK 787

Query: 738 FGQC-WIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEE 791
              C W+++KN V TF  G  S  +++ +Y  L  +          A +S +    +EE+
Sbjct: 788 RPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHDTDEEQ 847

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           KE     HSEKLALA+ L+   +   TIRI KN+R+C  CH   K VSM+ H EI L D 
Sbjct: 848 KEHNLWNHSEKLALAYGLLVVPEGS-TIRIFKNLRVCADCHLVFKLVSMVFHREIVLRDP 906

Query: 852 KCLHHFKNGQCSCGDYW 868
              H FK+G CSC D+W
Sbjct: 907 YRFHQFKHGSCSCSDFW 923



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 237/548 (43%), Gaps = 70/548 (12%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQAC--IDSNSIHLARKLHAFLN-LVTE 88
           L  NG + EA+     +  +G     N    ++  C  ++     L    H  ++ L+T 
Sbjct: 120 LSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTH 179

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
           + V     L++++     + DA  +F+ M ER+  +W+AMI  YS ++ + +   +   M
Sbjct: 180 VSV--ANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDM 237

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
               + PD      ++  C +      G  +HSL +  G+ C   + N+++ +Y   GKL
Sbjct: 238 RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKL 297

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR-EEIKLGVVTFN----- 262
             A   F +M  +D ++WN+MIS Y Q     EA     ++ + +E     +TF+     
Sbjct: 298 DEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGA 357

Query: 263 ----------------ILIRSYNQL-----------GQCDVAMEMVKRMESLGITPDVFT 295
                           IL RS   +            +C+ +ME  +R+       DV +
Sbjct: 358 CSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCN-SMEDTERVFESMPCYDVVS 416

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL-AMGMEIHSLA 354
              +  G+A     + A+ +F  M   G+ PN +T+ +    C  L  L + GM +H+  
Sbjct: 417 CNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYV 476

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
            + G   D  + NSLI MY+ C +LE++  +F  I +K V SWN++IA   + G   +A 
Sbjct: 477 TQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAI 536

Query: 415 ELFIKMQESDVPPNVITWNVLISG----------------YIQNGNE------DEAVDLF 452
           +LF+  Q +    +       +S                  ++NG +      +  +D++
Sbjct: 537 KLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMY 596

Query: 453 QRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            + GK         D   R T  WN+LI+GY + G    A   F+ M S    P+ VT +
Sbjct: 597 GKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFV 656

Query: 505 SVLPACAY 512
           ++L AC++
Sbjct: 657 ALLSACSH 664



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 150/333 (45%), Gaps = 9/333 (2%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIH-LARKLHAFLNLVTEI-DVFVKTKLL 98
           A+ V   +   G K    T INL   C     +H     LHA++     + D ++   L+
Sbjct: 433 AMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLI 492

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
           ++YA CG L+ +  +F  +  +++ +W+A+I A  R  R  E ++LF      G   D F
Sbjct: 493 TMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRF 552

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
              + L +  N    E G  +H L +K G+ C   V N+ + +Y KCGK+    +     
Sbjct: 553 CLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDP 612

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
             +    WN++ISGY + G   EA   F  M     K   VTF  L+ + +  G  D  M
Sbjct: 613 AHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGM 672

Query: 279 EMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
           +    M  + G++P +    C++    + G+ ++A     EM    V+PN +   S +S+
Sbjct: 673 DYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMP---VLPNDLIWRSLLSS 729

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDD---VLVGN 367
               K L +G +     +++   DD   VL+ N
Sbjct: 730 SRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSN 762



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 183/410 (44%), Gaps = 47/410 (11%)

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL---KALAMGMEIH 351
           +W   +SG A+ G  S A  L + M    V  +G  + S ++AC      +  A G  IH
Sbjct: 8   SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIH 67

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           +L  + G   +V +G +L+++Y     +  A+R+F  +  ++V SW +++      G   
Sbjct: 68  ALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCME 127

Query: 412 KAYELFIKMQESDVPPNV---------------------ITWNVLISGYIQN-------- 442
           +A   + +M++  V  N                      +T +V++SG + +        
Sbjct: 128 EALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLI 187

Query: 443 ---GNEDEAVD---LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
              GN     D   LF RM + D++     SWN++I+ Y      +    V   M+    
Sbjct: 188 TMFGNLRRVQDAERLFDRMEERDRI-----SWNAMISMYSHEEVYSKCFIVLSDMRHGEV 242

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            P+  T+ S++  CA          IH   +   L  S+P++N+L++ Y+ +G +  + +
Sbjct: 243 KPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ-MKSFGLKPNRGTFLSIILAHSLAG 615
           +F  MS +D+I+WN++I  YV       AL+   Q +++    PN  TF S + A S   
Sbjct: 303 LFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE 362

Query: 616 MVDLGKKVFCSITE-CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
            +  G+ +   I +   Q + +I   ++++ +Y +   +E+     E MP
Sbjct: 363 ALMNGRTIHAMILQRSLQNVLLIG--NSLLTMYSKCNSMEDTERVFESMP 410



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 129/318 (40%), Gaps = 39/318 (12%)

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV------ 449
           SW + ++G  + G    A+ L   M+E DVP +      L++     G ++ A       
Sbjct: 8   SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIH 67

Query: 450 DLFQRMGKNDKV---------------------------KRNTASWNSLIAGYQQLGQKN 482
            L  R G    V                           +RN  SW +++      G   
Sbjct: 68  ALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCME 127

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
            AL  +R+M+      N   + +V+  C  L       ++   V+   L + + V NSLI
Sbjct: 128 EALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLI 187

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
             +     +  +  +FD M  +D I+WN++I  Y     +     +   M+   +KP+  
Sbjct: 188 TMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVT 247

Query: 603 TFLSIILAHSLAGMVDLGKKV--FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
           T  S++   + + +V LG  +   C  +  +  +P+I   +A++++Y  +GKL+EA    
Sbjct: 248 TLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLI---NALVNMYSTAGKLDEAESLF 304

Query: 661 EDMPIEPDSSIWEALLTA 678
            +M    D   W  ++++
Sbjct: 305 RNMS-RRDVISWNTMISS 321


>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 234/776 (30%), Positives = 371/776 (47%), Gaps = 106/776 (13%)

Query: 102 AKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFP 161
           A+ G ++ AR  FE M  R   +++A++  Y R++     + LF  M    L   + L  
Sbjct: 28  ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALIS 87

Query: 162 KILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK 221
            +        D  A   + S+     +        S+L  YV+ G L  A R F+ M E+
Sbjct: 88  GLSLRRQTLPD--AAAALASIPFPPSVVSF----TSLLRGYVRHGLLADAIRLFQQMPER 141

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMV 281
           + V++  ++ G    G  +EA RLFD                               EM 
Sbjct: 142 NHVSYTVLLGGLLDAGRVNEARRLFD-------------------------------EMP 170

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
            R        DV  WT M+SG+ Q GR ++A  LF EM                      
Sbjct: 171 DR--------DVVAWTAMLSGYCQAGRITEARALFDEMP--------------------- 201

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
                               +V+   ++I+ Y++  E+  A ++F+++ +++  SW +M+
Sbjct: 202 ------------------KRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAML 243

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
            GY QAG+   A ELF  M E  V       N ++ G+ Q G  D A  +F++M +    
Sbjct: 244 VGYIQAGHVEDAAELFNAMPEHPV----AACNAMMVGFGQRGMVDAAKTVFEKMRE---- 295

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
            R+  +W+++I  Y+Q      AL  FR+M      PN  +++S+L  CA L   +  +E
Sbjct: 296 -RDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGRE 354

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           +H  +LR S +  +  +++LI  Y K GN+  ++ +F     KDI+ WNS+I GY  HG 
Sbjct: 355 VHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGL 414

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
              AL +F  M+  G+ P+  T++  + A S  G V  G+++F S+T    I P  EHYS
Sbjct: 415 GEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYS 474

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            M+DL GRSG +EEA + I++MP+EPD+ IW AL+ ACR+H N ++A +A ++L +LEPG
Sbjct: 475 CMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPG 534

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
           +     L+  IY   G+ EDA K+RK         S G  WIE    V+ F +G   +  
Sbjct: 535 NAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSG---DVL 591

Query: 762 SDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGS 812
           +   ++ +  + E +      SG           I+EE+K      HSE+ A+A+ L+  
Sbjct: 592 AHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKI 651

Query: 813 SQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +    IR++KN+R+C  CH   K ++ +   EI L D+   HHFK+G CSC DYW
Sbjct: 652 PEG-MPIRVMKNLRVCGDCHSAIKLIAKITSREIVLRDANRFHHFKDGFCSCRDYW 706



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 151/337 (44%), Gaps = 40/337 (11%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFL------- 83
           C  GR+ EA  + D +       +RN  ++  ++     +  ++LARKL   +       
Sbjct: 185 CQAGRITEARALFDEMP------KRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVS 238

Query: 84  ---------------------NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
                                N + E  V     ++  + + G +D A+ VFE MRER+ 
Sbjct: 239 WTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDD 298

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            TWSAMI AY +++   E +  F  M+  G+ P+      IL  C      + G+ +H+ 
Sbjct: 299 GTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAA 358

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           +++          ++++ +Y+KCG L  A+R F + + KD V WNSMI+GY Q G  ++A
Sbjct: 359 MLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQA 418

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMIS 301
             +F  M    +    +T+   + + +  G+     E+   M  +  I P    ++CM+ 
Sbjct: 419 LGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVD 478

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
              ++G   +A DL K M    V P+ V   + + AC
Sbjct: 479 LLGRSGLVEEAFDLIKNMP---VEPDAVIWGALMGAC 512



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 193/450 (42%), Gaps = 59/450 (13%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           +Y  LL   +D+  ++ AR+L    + + + DV   T +LS Y + G + +AR +F++M 
Sbjct: 145 SYTVLLGGLLDAGRVNEARRL---FDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMP 201

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           +RN+ +W+AMI  Y+++       +LF +M +        +    +QA G+  D  A +L
Sbjct: 202 KRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQA-GHVED--AAEL 258

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ--- 235
            +++      +C     N+++  + + G +  A+  FE M E+D   W++MI  Y Q   
Sbjct: 259 FNAMPEHPVAAC-----NAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEF 313

Query: 236 --------------------------------IGENDEAHRLFDKMCREEIKLGVVTFNI 263
                                           +   D    +   M R    + V   + 
Sbjct: 314 LMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSA 373

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           LI  Y + G  D A  +    E      D+  W  MI+G+AQ+G   QAL +F +M   G
Sbjct: 374 LITMYIKCGNLDKAKRVFHTFE----PKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAG 429

Query: 324 VMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           + P+G+T   A++AC+    +  G EI +S+ V           + ++++  +   +E A
Sbjct: 430 MSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEA 489

Query: 383 ERVFDMIK----DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
              FD+IK    + D   W +++ G C+     +  E+  K      P N   + +L   
Sbjct: 490 ---FDLIKNMPVEPDAVIWGALM-GACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHI 545

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           Y   G  ++A  + + +   +  K    SW
Sbjct: 546 YTSVGRWEDASKMRKFISSRNLNKSPGCSW 575



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/396 (20%), Positives = 165/396 (41%), Gaps = 82/396 (20%)

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV- 425
           N+ I   ++   +E A   F+ +  +   S+N+++AGY +      A  LF +M   D+ 
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 426 ----------------------------PPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
                                       PP+V+++  L+ GY+++G   +A+ LFQ+M +
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 458 NDKVK--------------------------RNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            + V                           R+  +W ++++GY Q G+   A  +F +M
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200

Query: 492 QS----------SCFYPN-----CVTILSVLPA------CAYLVASNKVKEIHGC--VLR 528
                       S +  N        +  V+P        A LV   +   +     +  
Sbjct: 201 PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFN 260

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
              E  +   N+++  + + G +  ++T+F+ M  +D  TW+++I  Y  + F   AL  
Sbjct: 261 AMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALST 320

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F +M   G++PN  + +SI+   +   ++D G++V  ++  C   + +    SA+I +Y 
Sbjct: 321 FREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFA-VSALITMYI 379

Query: 649 RSGKLEEAMEFIEDMPIEP-DSSIWEALLTACRIHG 683
           + G L++A         EP D  +W +++T    HG
Sbjct: 380 KCGNLDKAKRVFHT--FEPKDIVMWNSMITGYAQHG 413



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 117/255 (45%), Gaps = 4/255 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           N  L EA++    +  +G +    + I++L  C     +   R++HA  L    ++DVF 
Sbjct: 311 NEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFA 370

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+++Y KCG LD A+ VF     +++  W++MI  Y++     + + +F  M   G+
Sbjct: 371 VSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGM 430

Query: 154 FPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   +   L AC   G  + G+ + +S+ +   +       + ++ +  + G +  A 
Sbjct: 431 SPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAF 490

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
              ++M  E D V W +++ G  ++  N E   +  K   E        + +L   Y  +
Sbjct: 491 DLIKNMPVEPDAVIWGALM-GACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSV 549

Query: 272 GQCDVAMEMVKRMES 286
           G+ + A +M K + S
Sbjct: 550 GRWEDASKMRKFISS 564



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 18/200 (9%)

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           N+ I   A++GNI  +R  F+ M  +   ++N+L+ GY  +    AAL LF +M S  L 
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDL- 79

Query: 599 PNRGTFLSIILAHSL-AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
               ++ ++I   SL    +        SI       P +  +++++  Y R G L +A+
Sbjct: 80  ---ASYNALISGLSLRRQTLPDAAAALASIP----FPPSVVSFTSLLRGYVRHGLLADAI 132

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG-DVLIQRLILQIYAIC 716
              + MP E +   +  LL      G ++ A     RLFD  P  DV+    +L  Y   
Sbjct: 133 RLFQQMP-ERNHVSYTVLLGGLLDAGRVNEA----RRLFDEMPDRDVVAWTAMLSGYCQA 187

Query: 717 GKPEDALKVRKLERENTRRN 736
           G+  +A   R L  E  +RN
Sbjct: 188 GRITEA---RALFDEMPKRN 204


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 230/757 (30%), Positives = 361/757 (47%), Gaps = 78/757 (10%)

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           VIK G+     + +S++ VYVKC  L  AR+  E M  +D   WN  +S         EA
Sbjct: 15  VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQ-----------CDVAME-----------M 280
            +LF  M    I+L    F  LI +   LG            C    E           M
Sbjct: 75  VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134

Query: 281 VKRMESLG---------ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
             + +S+          +  ++ +   ++SGF       Q   +  ++   G  PN  T 
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTF 194

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
            S +  C     L  G  IH   +K G   D  + NSL+N+Y+KC     A +VF  I +
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 254

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------------- 432
           +DV SW ++I G+   GY G    +F +M      PN+ T+                   
Sbjct: 255 RDVVSWTALITGFVAEGY-GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV 313

Query: 433 ----------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
                             L+  Y +N   ++A  +F R+     +KR+  +W  ++AGY 
Sbjct: 314 HAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRL-----IKRDLFAWTVIVAGYA 368

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           Q GQ   A+  F +MQ     PN  T+ S L  C+ +   +  +++H   ++      + 
Sbjct: 369 QDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMF 428

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           V ++L+D YAK G +  +  +FDG+ S+D ++WN++ICGY  HG    AL  F+ M   G
Sbjct: 429 VASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEG 488

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
             P+  TF+ ++ A S  G+++ GKK F S+++ Y I P IEHY+ M+D+ GR+GK  E 
Sbjct: 489 TVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEV 548

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
             FIE+M +  +  IWE +L AC++HGNI+    A  +LF+LEP       L+  ++A  
Sbjct: 549 ESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAK 608

Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV 776
           G  +D   VR L      +   G  W+EV   V+ F++   S      ++  LQ++ + +
Sbjct: 609 GMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKL 668

Query: 777 -----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHC 831
                T  + H    + + EK+E+   HSE+LALAFAL+ S+    TIRI KN+R+C  C
Sbjct: 669 MSVGYTPNTDHVLHNVSDREKQELLFYHSERLALAFALL-STSTRKTIRIFKNLRICGDC 727

Query: 832 HETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           H+  K +S + + E+ + D  C HHFKNG CSC ++W
Sbjct: 728 HDFMKSISEITNQELVVRDINCFHHFKNGSCSCQNFW 764



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 218/439 (49%), Gaps = 35/439 (7%)

Query: 53  AKVRRNTYI--NLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDD 109
            ++R N +I  +L+ A       H    +HA +     E D+ +    +++Y K   +++
Sbjct: 84  TRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVEN 143

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
             + F+ M   NL + + ++  +   +   +   +   ++ +G  P+ + F  IL+ C +
Sbjct: 144 GWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCAS 203

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
            GD   GK +H  VIK G++    + NS++ VY KCG   +A + F  + E+D V+W ++
Sbjct: 204 KGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTAL 263

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA------------ 277
           I+G+   G      R+F++M  E     + TF  ++RS + L   D+             
Sbjct: 264 ITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSL 322

Query: 278 -------------------MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
                              +E  + + +  I  D+F WT +++G+AQ+G+  +A+  F +
Sbjct: 323 DGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQ 382

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   GV PN  T+ S++S C+ +  L  G ++HS+A+K G + D+ V ++L++MY+KC  
Sbjct: 383 MQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGC 442

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           +E AE VFD +  +D  SWN++I GY Q G  GKA + F  M +    P+ +T+  ++S 
Sbjct: 443 VEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSA 502

Query: 439 YIQNGNEDEAVDLFQRMGK 457
               G  +E    F  + K
Sbjct: 503 CSHMGLIEEGKKHFNSLSK 521



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 148/284 (52%), Gaps = 2/284 (0%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLS 99
            + + + +  +G      T+I++L++C   + + L +++HA  +    + + FV T L+ 
Sbjct: 275 GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVD 334

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +YAK   L+DA  +F  + +R+L+ W+ ++  Y++D +  + V+ F  M ++G+ P++F 
Sbjct: 335 MYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFT 394

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
               L  C      ++G+ +HS+ IK G S    V ++++ +Y KCG +  A   F+ + 
Sbjct: 395 LASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLV 454

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
            +D V+WN++I GY Q G+  +A + F+ M  E      VTF  ++ + + +G  +   +
Sbjct: 455 SRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKK 514

Query: 280 MVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
               +  + GITP +  + CM+    + G+  +     +EM   
Sbjct: 515 HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLT 558



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 105/221 (47%), Gaps = 9/221 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           +G+  +A+     +  +G K    T  + L  C    ++   R+LH+  +      D+FV
Sbjct: 370 DGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFV 429

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAKCGC++DA  VF+ +  R+  +W+ +I  YS+  +  + ++ F  M+ +G 
Sbjct: 430 ASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGT 489

Query: 154 FPDDFLFPKILQACGNCGDFEAGKL-MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD+  F  +L AC + G  E GK   +SL    G++        ++ +  + GK     
Sbjct: 490 VPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVE 549

Query: 213 RFFESMDEKDGV-AWNSMIS-----GYFQIGENDEAHRLFD 247
            F E M     V  W +++      G  + GE   A +LF+
Sbjct: 550 SFIEEMKLTSNVLIWETVLGACKMHGNIEFGER-AAMKLFE 589


>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
          Length = 1753

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 220/718 (30%), Positives = 368/718 (51%), Gaps = 80/718 (11%)

Query: 62   NLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
            +LLQ C  S   HL++++H+ + +  +    F+  +++SVYA  G + DA+ VFE     
Sbjct: 877  DLLQQCSKS---HLSQQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVFEVSPIE 933

Query: 121  ---NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
               NL  W++++ A        E +E++  M + G+  D F FP +++AC   G  +  +
Sbjct: 934  CFSNLLLWNSILRANVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALMGSRKLCR 993

Query: 178  LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
             +H  V+++G      V N ++ +Y K G++                             
Sbjct: 994  SVHGHVVEMGFQWNLHVGNELMGMYGKIGRM----------------------------- 1024

Query: 238  ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
              D+A ++F++M         V++N ++  Y     C  A EM + M S G+ P++ TWT
Sbjct: 1025 --DDARKVFERMAVRS----CVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWT 1078

Query: 298  CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
             ++S  A+ G+  + ++LF  M   G+      +   +S   DL A   G  IH   VK 
Sbjct: 1079 SLLSSHARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKG 1138

Query: 358  GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            GF + + V NSLI +Y K   + AA  +F  IK K                         
Sbjct: 1139 GFENYLFVKNSLICLYGKHGNVNAARILFLEIKTK------------------------- 1173

Query: 418  IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDK---VKRNTASWNSLIAG 474
                      N+++WN LIS Y   G  DEA  +F ++ K D+   V+ N  SW+++I G
Sbjct: 1174 ----------NIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGG 1223

Query: 475  YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS 534
            +   GQ   AL +FR+MQ +    N VTI SVL  CA L A +  +EIHG V+R  ++ +
Sbjct: 1224 FASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGN 1283

Query: 535  LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
            + V N LI+ Y KSG+      +F+ + +KD+I+WN+++ GY +HG    A+  FDQM  
Sbjct: 1284 ILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIK 1343

Query: 595  FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLE 654
             G +P+  TF++++ A S AG+V  G+++F  + + +++ P +EHY+ M+DL GR+G L+
Sbjct: 1344 DGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQ 1403

Query: 655  EAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYA 714
            EA + ++ MP+EP++ +W ALL +CR+H N ++A     ++F+L         L+  IYA
Sbjct: 1404 EASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSYMLLSNIYA 1463

Query: 715  ICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
              G+ ED+ KVR   +    + + GQ WI+VK  VY F  G    +  + +Y  L+++
Sbjct: 1464 ASGRWEDSAKVRISAKTKGLKKTPGQSWIQVKKKVYMFSAGNTQHAELEEVYRILKDL 1521



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 222/492 (45%), Gaps = 78/492 (15%)

Query: 59   TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
            T+  +++AC    S  L R +H   + +  + ++ V  +L+ +Y K G +DDAR+VFE M
Sbjct: 975  TFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERM 1034

Query: 118  RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD----- 172
              R+  +W+ M+  Y+ +       E+F +M   GL P+   +  +L +   CG      
Sbjct: 1035 AVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETM 1094

Query: 173  ------------------------------FEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
                                          F+ GK++H  V+K G      V+NS++ +Y
Sbjct: 1095 ELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLY 1154

Query: 203  VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
             K G +  AR  F  +  K+ V+WN+                                  
Sbjct: 1155 GKHGNVNAARILFLEIKTKNIVSWNA---------------------------------- 1180

Query: 263  ILIRSYNQLGQCDVA----MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
             LI SY  LG CD A    +++ K  E   + P+V +W+ +I GFA  G+  +AL+LF+ 
Sbjct: 1181 -LISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRR 1239

Query: 319  MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
            M    V  N VTI S +S C +L AL +G EIH   V+     ++LVGN LINMY+K   
Sbjct: 1240 MQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGS 1299

Query: 379  LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
             +    VF+ I++KD+ SWN+M+AGY   G    A   F +M +    P+ +T+  ++S 
Sbjct: 1300 FKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSA 1359

Query: 439  YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
                G   E  +LF +M K  +V+     +  ++    + G    A  V + M      P
Sbjct: 1360 CSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEASKVVKSMP---VEP 1416

Query: 499  NCVTILSVLPAC 510
            N     ++L +C
Sbjct: 1417 NACVWGALLNSC 1428


>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
          Length = 798

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 234/776 (30%), Positives = 370/776 (47%), Gaps = 106/776 (13%)

Query: 102 AKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFP 161
           A+ G ++ AR  FE M  R   +++A++  Y R++     + LF  M    L   + L  
Sbjct: 28  ARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNALIS 87

Query: 162 KILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK 221
            +        D  A   + S+     +        S+L  YV+ G L  A R F+ M E+
Sbjct: 88  GLSLRRQTLPD--AAAALASIPFPPSVVSF----TSLLRGYVRHGLLADAIRLFQQMPER 141

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMV 281
           + V++  ++ G    G  +EA RLFD                               EM 
Sbjct: 142 NHVSYTVLLGGLLDAGRVNEARRLFD-------------------------------EMP 170

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
            R        DV  WT M+SG+ Q GR ++A  LF EM                      
Sbjct: 171 DR--------DVVAWTAMLSGYCQAGRITEARALFDEMP--------------------- 201

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
                               +V+   ++I+ Y++  E+  A ++F+++ +++  SW +M+
Sbjct: 202 ------------------KRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAML 243

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
            GY QAG+   A ELF  M E  V       N ++ G+ Q G  D A  +F++M      
Sbjct: 244 VGYIQAGHVEDAAELFNAMPEHPV----AACNAMMVGFGQRGMVDAAKTVFEKM-----C 294

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
           +R+  +W+++I  Y+Q      AL  FR+M      PN  +++S+L  CA L   +  +E
Sbjct: 295 ERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGRE 354

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           +H  +LR S +  +  +++LI  Y K GN+  ++ +F     KDI+ WNS+I GY  HG 
Sbjct: 355 VHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGL 414

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
              AL +F  M+  G+ P+  T++  + A S  G V  G+++F S+T    I P  EHYS
Sbjct: 415 GEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYS 474

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            M+DL GRSG +EEA + I++MP+EPD+ IW AL+ ACR+H N ++A  A ++L +LEPG
Sbjct: 475 CMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPG 534

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
           +     L+  IY   G+ EDA K+RK         S G  WIE    V+ F +G   +  
Sbjct: 535 NAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCSWIEYDKRVHLFTSG---DVL 591

Query: 762 SDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGS 812
           +   ++ +  + E +      SG           I+EE+K      HSE+ A+A+ L+  
Sbjct: 592 AHPEHAAILRILEKLDGLLMESGYSADGSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKI 651

Query: 813 SQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +    IR++KN+R+C  CH   K ++ +   EI L D+   HHFK+G CSC DYW
Sbjct: 652 PEG-MPIRVMKNLRVCGDCHSAIKLIAKITSREIILRDANRFHHFKDGFCSCRDYW 706



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 194/457 (42%), Gaps = 94/457 (20%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           +Y  LL   +D+  ++ AR+L    + + + DV   T +LS Y + G + +AR +F++M 
Sbjct: 145 SYTVLLGGLLDAGRVNEARRL---FDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEMP 201

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           +RN+ +W+AMI  Y+++       +LF +M +                            
Sbjct: 202 KRNVVSWTAMISGYAQNGEVNLARKLFEVMPE---------------------------- 233

Query: 179 MHSLVIKLGMSCVRRVRNSV-----LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
                           RN V     L  Y++ G +  A   F +M E    A N+M+ G+
Sbjct: 234 ----------------RNEVSWTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGF 277

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
            Q G  D A  +F+KMC                                         D 
Sbjct: 278 GQRGMVDAAKTVFEKMCER---------------------------------------DD 298

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            TW+ MI  + QN    +AL  F+EM + GV PN  ++ S ++ C  L  L  G E+H+ 
Sbjct: 299 GTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAA 358

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            ++  F  DV   ++LI MY KC  L+ A+RVF   + KD+  WNSMI GY Q G   +A
Sbjct: 359 MLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQA 418

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
             +F  M+ + + P+ IT+   ++     G   E  ++F  M  N  ++     ++ ++ 
Sbjct: 419 LGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVD 478

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
              + G    A  + + M      P+ V   +++ AC
Sbjct: 479 LLGRSGLVEEAFDLIKNMPVE---PDAVIWGALMGAC 512



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 150/337 (44%), Gaps = 40/337 (11%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFL------- 83
           C  GR+ EA  + D +       +RN  ++  ++     +  ++LARKL   +       
Sbjct: 185 CQAGRITEARALFDEMP------KRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVS 238

Query: 84  ---------------------NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
                                N + E  V     ++  + + G +D A+ VFE M ER+ 
Sbjct: 239 WTAMLVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDD 298

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            TWSAMI AY +++   E +  F  M+  G+ P+      IL  C      + G+ +H+ 
Sbjct: 299 GTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAA 358

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           +++          ++++ +Y+KCG L  A+R F + + KD V WNSMI+GY Q G  ++A
Sbjct: 359 MLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQA 418

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMIS 301
             +F  M    +    +T+   + + +  G+     E+   M  +  I P    ++CM+ 
Sbjct: 419 LGIFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVD 478

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
              ++G   +A DL K M    V P+ V   + + AC
Sbjct: 479 LLGRSGLVEEAFDLIKNMP---VEPDAVIWGALMGAC 512



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 83/396 (20%), Positives = 165/396 (41%), Gaps = 82/396 (20%)

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV- 425
           N+ I   ++   +E A   F+ +  +   S+N+++AGY +      A  LF +M   D+ 
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80

Query: 426 ----------------------------PPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
                                       PP+V+++  L+ GY+++G   +A+ LFQ+M +
Sbjct: 81  SYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPE 140

Query: 458 NDKVK--------------------------RNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            + V                           R+  +W ++++GY Q G+   A  +F +M
Sbjct: 141 RNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEARALFDEM 200

Query: 492 QS----------SCFYPN-----CVTILSVLPA------CAYLVASNKVKEIHGC--VLR 528
                       S +  N        +  V+P        A LV   +   +     +  
Sbjct: 201 PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAAELFN 260

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
              E  +   N+++  + + G +  ++T+F+ M  +D  TW+++I  Y  + F   AL  
Sbjct: 261 AMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALST 320

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F +M   G++PN  + +SI+   +   ++D G++V  ++  C   + +    SA+I +Y 
Sbjct: 321 FREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFA-VSALITMYI 379

Query: 649 RSGKLEEAMEFIEDMPIEP-DSSIWEALLTACRIHG 683
           + G L++A         EP D  +W +++T    HG
Sbjct: 380 KCGNLDKAKRVFHT--FEPKDIVMWNSMITGYAQHG 413



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 116/255 (45%), Gaps = 4/255 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           N  L EA++    +  +G +    + I++L  C     +   R++HA  L    ++DVF 
Sbjct: 311 NEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFA 370

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+++Y KCG LD A+ VF     +++  W++MI  Y++     + + +F  M   G+
Sbjct: 371 VSALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGM 430

Query: 154 FPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   +   L AC   G  + G+ + +S+ +   +       + ++ +  + G +  A 
Sbjct: 431 SPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAF 490

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
              ++M  E D V W +++ G  ++  N E      K   E        + +L   Y  +
Sbjct: 491 DLIKNMPVEPDAVIWGALM-GACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSV 549

Query: 272 GQCDVAMEMVKRMES 286
           G+ + A +M K + S
Sbjct: 550 GRWEDASKMRKFISS 564



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 18/200 (9%)

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           N+ I   A++GNI  +R  F+ M  +   ++N+L+ GY  +    AAL LF +M S  L 
Sbjct: 21  NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDL- 79

Query: 599 PNRGTFLSIILAHSL-AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
               ++ ++I   SL    +        SI       P +  +++++  Y R G L +A+
Sbjct: 80  ---ASYNALISGLSLRRQTLPDAAAALASIP----FPPSVVSFTSLLRGYVRHGLLADAI 132

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG-DVLIQRLILQIYAIC 716
              + MP E +   +  LL      G ++ A     RLFD  P  DV+    +L  Y   
Sbjct: 133 RLFQQMP-ERNHVSYTVLLGGLLDAGRVNEA----RRLFDEMPDRDVVAWTAMLSGYCQA 187

Query: 717 GKPEDALKVRKLERENTRRN 736
           G+  +A   R L  E  +RN
Sbjct: 188 GRITEA---RALFDEMPKRN 204


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 241/753 (32%), Positives = 373/753 (49%), Gaps = 88/753 (11%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           F  +L+ C    D   GK +HSL IK  +       N  + +Y KCG+L WAR+ F+ + 
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
           + +  ++N++I+ Y +      AH+L                      ++Q+ +      
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQL----------------------FDQIPE------ 102

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
                      PD+ ++  +IS +A  G T+ AL LF  M  +G+  +  T+++ I+AC 
Sbjct: 103 -----------PDLVSYNTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACC 151

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWN 398
           D   + +  ++HS+AV  GF   V V N+L+  Y K  +L+ A+RVF  M   +D  SWN
Sbjct: 152 D--DVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWN 209

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---------------------NVLIS 437
           SMI  Y Q     KA  LF +M    +  ++ T                       ++ +
Sbjct: 210 SMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKT 269

Query: 438 GYIQNGNEDEA-VDLFQRMGKN---------DKVKRNTASWNSLIAGYQQLGQ-KNNALG 486
           G+ QN +     +DL+ + G           +  + +   WN++++GY Q  +   +AL 
Sbjct: 270 GFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALE 329

Query: 487 VFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS-LPVMNSLIDTY 545
            FR+MQ   + PN  + + V+ AC+ L + ++ K+IH   L+  + S+ + V N+LI  Y
Sbjct: 330 CFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMY 389

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
           +K GN+  +R +FD M+  + ++ NS+I GY  HG    +L LF  M    + P   TF+
Sbjct: 390 SKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFI 449

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
           S++ A +  G V+ G   F  + E + I P  EHYS MIDL GR+GKL EA   I  MP 
Sbjct: 450 SVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPF 509

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
            P S  W +LL ACR HGNI+LAV A  ++  LEP +     ++  +YA  G+ E+   V
Sbjct: 510 NPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATV 569

Query: 726 RKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPEN 775
           RK  R+   +   G  WIEVK  ++ FV    S      +Y +L+           VP+ 
Sbjct: 570 RKFMRDRGVKKKPGCSWIEVKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDV 629

Query: 776 VTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETA 835
             A     G      EKE   G HSEKLA+AF LI S++    + +VKN+R+C  CH   
Sbjct: 630 RWALVKDDG--TRGGEKEIRLGHHSEKLAVAFGLI-STKDGEPVLVVKNLRICGDCHNAI 686

Query: 836 KYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           K++S +   EI + D+   H FK GQCSCGDYW
Sbjct: 687 KFISAIAGREITVRDAHRFHCFKEGQCSCGDYW 719



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 236/518 (45%), Gaps = 72/518 (13%)

Query: 60  YINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           + +LL+ CI    +   + LH+ ++        +     + +Y+KCG L  AR+ F+D+ 
Sbjct: 11  FRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDIS 70

Query: 119 ERNLYTWSAMIGAYSRDQR-------WREVVE------------------------LFFL 147
           + N+++++A+I AY+++ R       + ++ E                        LF  
Sbjct: 71  DPNVFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSG 130

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M + GL  D F    ++ AC  C D      +HS+ +  G      V N++L  Y K G 
Sbjct: 131 MREMGLDMDXFTLSAVITAC--CDDVGLIGQLHSVAVSSGFDSYVSVNNALLTYYGKNGD 188

Query: 208 LIWARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           L  A+R F  M   +D V+WNSMI  Y Q  E  +A  LF +M R  + + + T   ++ 
Sbjct: 189 LDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLT 248

Query: 267 SYNQL--------------------------------GQCDVAMEMVKRMESLGITPDVF 294
           ++  L                                 +C   M   +++      PD+ 
Sbjct: 249 AFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLV 308

Query: 295 TWTCMISGFAQNGR-TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            W  M+SG++QN      AL+ F++M  +G  PN  +    ISAC++L + + G +IHSL
Sbjct: 309 LWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSL 368

Query: 354 AVKMGF-TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
           A+K    ++ + V N+LI MYSKC  L+ A R+FD + + +  S NSMIAGY Q G   +
Sbjct: 369 ALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEME 428

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
           +  LF  M E  + P  IT+  ++S     G  +E  + F  M +   ++     ++ +I
Sbjct: 429 SLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMI 488

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               + G+ + A  +  +M    F P  +   S+L AC
Sbjct: 489 DLLGRAGKLSEAENLIARMP---FNPGSIGWASLLGAC 523



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 198/480 (41%), Gaps = 59/480 (12%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
           G    A+ +   +   G  +   T   ++ AC D   + L  +LH+ + + +  D +V  
Sbjct: 119 GETAPALGLFSGMREMGLDMDXFTLSAVITACCDD--VGLIGQLHS-VAVSSGFDSYVSV 175

Query: 96  K--LLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              LL+ Y K G LDDA+ VF  M   R+  +W++MI AY + Q   + + LF  MV+ G
Sbjct: 176 NNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRG 235

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC-GKLIWA 211
           L  D F    +L A     D   G   H  +IK G      V + ++ +Y KC G +   
Sbjct: 236 LNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDC 295

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGE-------------------ND------------ 240
           R+ FE + E D V WN+M+SGY Q  E                   ND            
Sbjct: 296 RKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSN 355

Query: 241 -----EAHRLFDKMCREEIKLGVVTF-NILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                +  ++     + +I    ++  N LI  Y++ G    A  +  RM       +  
Sbjct: 356 LSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAE----HNTV 411

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSL 353
           +   MI+G+AQ+G   ++L LF+ M    + P  +T  S +SAC     +  G    + +
Sbjct: 412 SLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMM 471

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWNSMIAGYCQAG---- 408
             K     +    + +I++  +  +L  AE +   M  +     W S++ G C+      
Sbjct: 472 KEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLL-GACRTHGNIE 530

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
              KA    ++++ S+  P V+  N+    Y   G  +E   + + M      K+   SW
Sbjct: 531 LAVKAANQVLQLEPSNAAPYVVLSNM----YASAGRWEEVATVRKFMRDRGVKKKPGCSW 586


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 235/782 (30%), Positives = 387/782 (49%), Gaps = 72/782 (9%)

Query: 61  INLLQACIDSNSIHLARKLH--AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           + +L+ C+  + + L  ++H  A    +   D  ++T+L+ +Y       DA  VF  + 
Sbjct: 43  LAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLP 102

Query: 119 ERNL---YTWSAMIGAYSRDQRWREVVELFFLMV---QDGLFPDDFLFPKILQACGNCGD 172
                    W+ +I   +    +R  + LF+L +        PD   FP ++++C   G 
Sbjct: 103 RGAAACALPWNWLIRGLTMAGDYRSAL-LFYLKMWAHPSAPLPDSHTFPYVVKSCAALGA 161

Query: 173 FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISG 232
              G+L+H     LG+     V ++++ +Y   G L  AR+ F+ M E+D V WN M+ G
Sbjct: 162 IALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDG 221

Query: 233 YFQIGENDEAHRLFDKM--------------------CREEIKLGVVTFNILIRSYNQLG 272
           Y + G    A  LF  M                       ++  GV    + ++ Y    
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVK-YGLES 280

Query: 273 QCDVAMEMVKRMES----------LGITP--DVFTWTCMISGFAQNGRTSQALDLFKEMS 320
           +  VA  +V                G+ P  D+ TW  MISG  QNG   QAL LF +M 
Sbjct: 281 EVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQ 340

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
             G+ P+ VT+ S + A TDL     G E+H   V+     DV + ++L+++Y KC  + 
Sbjct: 341 KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVR 400

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI---- 436
            A+ V+D  K  DV   ++MI+GY   G   +A ++F  + E  + PN +    ++    
Sbjct: 401 MAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACA 460

Query: 437 ------------SGYIQNGNEDEA------VDLFQRMGKND-------KVK-RNTASWNS 470
                       S  ++N  E         +D++ + G+ D       K+  ++  +WNS
Sbjct: 461 SMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNS 520

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +I+ + Q G+   AL +FR+M       + VTI SVL ACA L A    KEIHG V++  
Sbjct: 521 MISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGP 580

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           + + L   ++LID Y K GN+ ++  +F+ M  K+ ++WNS+I  Y  +G    ++ L  
Sbjct: 581 IRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLR 640

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
            M+  G K +  TFL+++ A + AG V  G ++F  +TE YQI P +EH++ M+DLY R+
Sbjct: 641 HMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRA 700

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           GKL++AME I DMP +PD+ IW ALL ACR+H N++LA +A + LF L+P +     L+ 
Sbjct: 701 GKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMS 760

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ 770
            I A+ G+ +   KVR+L ++   +   G  W++V N  + FV    S   S+ +Y  L+
Sbjct: 761 NINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFVAADKSHPDSEDIYMSLK 820

Query: 771 NV 772
           ++
Sbjct: 821 SI 822



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 171/631 (27%), Positives = 278/631 (44%), Gaps = 67/631 (10%)

Query: 58  NTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           +T+  ++++C    +I L R +H     L  + D+FV + L+ +YA  G L DAR+VF+ 
Sbjct: 147 HTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDG 206

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M ER+   W+ M+  Y +       VELF  M   G  P+       L       D   G
Sbjct: 207 MAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFG 266

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
             +H+L +K G+     V N+++++Y KC  L    + F  M   D V WN MISG  Q 
Sbjct: 267 VQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQN 326

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG-----------------QCDV--- 276
           G  D+A  LF  M +  I+   VT   L+ +   L                    DV   
Sbjct: 327 GFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLV 386

Query: 277 -----------AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
                      A+ M + +       DV   + MISG+  NG + +A+ +F+ +   G+ 
Sbjct: 387 SALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIR 446

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           PN V I S + AC  + A+ +G E+HS A+K  +     V ++L++MY+KC  L+ +  +
Sbjct: 447 PNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYI 506

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP-PNVITWNVL--------- 435
           F  I  KD  +WNSMI+ + Q G   +A  LF +M    V   NV   +VL         
Sbjct: 507 FSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAI 566

Query: 436 -----ISGYIQNGN-------EDEAVDLFQRMGKNDKVKR--------NTASWNSLIAGY 475
                I G +  G        E   +D++ + G  +   R        N  SWNS+IA Y
Sbjct: 567 YYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASY 626

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESS 534
              G    ++ + R MQ   F  + VT L+++ ACA+     +   +  C+     +   
Sbjct: 627 GAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPR 686

Query: 535 LPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLHGFWHAALDLFDQMK 593
           +     ++D Y+++G +  +  +   M  K D   W +L+    +H   +  L      +
Sbjct: 687 MEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHR--NVELAEIASQE 744

Query: 594 SFGLKP-NRGTFLSIILAHSLAGMVDLGKKV 623
            F L P N G ++ +   +++AG  D   KV
Sbjct: 745 LFKLDPHNSGYYVLMSNINAVAGRWDGVSKV 775



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 149/289 (51%), Gaps = 2/289 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG   EA+ +   +  QG +       ++L AC    ++ L ++LH++ L    E   +V
Sbjct: 427 NGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYV 486

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           ++ L+ +YAKCG LD +  +F  +  ++  TW++MI +++++    E + LF  M  +G+
Sbjct: 487 ESALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGV 546

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
              +     +L AC +      GK +H +VIK  +       ++++ +Y KCG L WA R
Sbjct: 547 KYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHR 606

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            FESM EK+ V+WNS+I+ Y   G   E+  L   M  E  K   VTF  L+ +    GQ
Sbjct: 607 VFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQ 666

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
               + + + M E   I P +  + CM+  +++ G+  +A++L  +M F
Sbjct: 667 VQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPF 715


>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 702

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 214/731 (29%), Positives = 371/731 (50%), Gaps = 97/731 (13%)

Query: 54  KVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDARE 112
           ++  +TY +LL++C    +++L +++HA  L        FV+TKLL +Y + GCLDDA  
Sbjct: 59  QIDSSTYASLLESC---RTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANL 115

Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD 172
           VF  M +RNLY+W+A++  +     + E + LF  +  D +  + F+FP +L+ CG    
Sbjct: 116 VFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRV 175

Query: 173 FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISG 232
            E G+ +H +VIK                  +C  +  A + F     K+          
Sbjct: 176 LELGRQLHGVVIK------------------RCADMGSALKIFSGFSVKN---------- 207

Query: 233 YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
                                    VV++N +I  Y + G  + A E+  +ME +G   D
Sbjct: 208 -------------------------VVSYNTMIVGYCENGNVEKAKELFDQMELVG--KD 240

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEIH 351
             +W  MISG+A N    +AL +F+++    G+  +  T+ S ++AC D+ +L  G E+H
Sbjct: 241 TISWNSMISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVH 300

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           + AV  G   +  VG +L+ MYSKCE+L+AA+  FD + ++D                  
Sbjct: 301 AQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDT----------------- 343

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                              TWNVLISGY      +   +L Q+M K D  + N  +WN +
Sbjct: 344 ------------------ATWNVLISGYACCNQLENIQNLIQKM-KGDGFEPNVYTWNGI 384

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           I+G+ + G    AL +F +MQ+S   P+  T+  +LPACA L    + K++H   +R+  
Sbjct: 385 ISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGY 444

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
           E  + +  +L+D YAK G+I ++  +++ +S+ ++++ N+++  Y +HG     + LF  
Sbjct: 445 ELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRN 504

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           M   G +P+  TFLS++ +   AG V+ G + F  +T  Y + P ++HY+ ++DL  R+G
Sbjct: 505 MLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMT-YYNVTPSLKHYTCIVDLLSRAG 563

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
           +L+EA E ++ +P +PDS +W ALL  C I GN++L  +A E L +LEP +     L+  
Sbjct: 564 RLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLAN 623

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN 771
           +YA  G+  D  + R++ ++     S G  WIE +  ++ F++   S   ++ +Y+ L N
Sbjct: 624 LYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIEDREDIHVFLSCDKSHEKTEDIYTTLDN 683

Query: 772 VPENVTARSSH 782
           +  ++     H
Sbjct: 684 LNTHMRTGLEH 694



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/438 (22%), Positives = 204/438 (46%), Gaps = 52/438 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-----NLVTEI 89
           +G   EA+++ + +      +    +  +L+ C     + L R+LH  +     ++ + +
Sbjct: 138 HGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVIKRCADMGSAL 197

Query: 90  DVFVKTKLLSV---------YAKCGCLDDAREVFEDMR--ERNLYTWSAMIGAYSRDQRW 138
            +F    + +V         Y + G ++ A+E+F+ M    ++  +W++MI  Y+ +  +
Sbjct: 198 KIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLF 257

Query: 139 REVVELFF-LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
            E + +F  L++++G+  D F    +L AC +      GK +H+  +  G+     V  +
Sbjct: 258 DEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGA 317

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           ++ +Y KC  L  A+  F+ + E+D   WN                              
Sbjct: 318 LVEMYSKCEDLKAAQLAFDGVTERDTATWN------------------------------ 347

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
                +LI  Y    Q +    ++++M+  G  P+V+TW  +ISG  +NG    AL LF 
Sbjct: 348 -----VLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFT 402

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
           EM    + P+  T+   + AC  L  +A G ++H+ +++ G+  DV +G +L++MY+KC 
Sbjct: 403 EMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCG 462

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
            ++ A +V++ I + ++ S N+M+  Y   G+  +   LF  M  +   P+ +T+  ++S
Sbjct: 463 SIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLS 522

Query: 438 GYIQNGNEDEAVDLFQRM 455
             +  G  +   + F  M
Sbjct: 523 SCVHAGAVETGHEFFDLM 540


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 219/646 (33%), Positives = 342/646 (52%), Gaps = 54/646 (8%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L + Y  L + D A ++   + S    PD   W  +++G +     S+A++ F  M   G
Sbjct: 155 LAKLYFVLSRVDHARKVFDTVPS----PDTVLWNTLLAGLSG----SEAVESFARMVCDG 206

Query: 324 -VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
            V P+  T+ S + A  ++  + MG  +HS A K G  +   V   LI++YSKC ++E+A
Sbjct: 207 SVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESA 266

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI------ 436
             +FDM++  D+ ++N++I+GY   G  G +  LF ++    + PN  T   LI      
Sbjct: 267 RCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPF 326

Query: 437 ---------------SGYIQNGNEDEAVDLFQ---------RMGKNDKVKRNTASWNSLI 472
                          SG+  N     A+             R   +   ++   SWN++I
Sbjct: 327 GHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMI 386

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
           +GY Q G    A+ +F +M      PN +TI S L ACA L A +  K +H  +    LE
Sbjct: 387 SGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLE 446

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
            ++ VM +LID YAK G+I  +R IF+ M +K++++WN++I GY LHG    AL L+  M
Sbjct: 447 PNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDM 506

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
               L P   TFLS++ A S  G+V+ G KVF S+T+ Y I P IEH + M+DL GR+G+
Sbjct: 507 LDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGRAGQ 566

Query: 653 LEEAMEFIEDMPIEP-DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
           L+EA E I + P       +W ALL AC +H + DLA LA ++LF+L+P +     L+  
Sbjct: 567 LKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPENSGYYVLLSN 626

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN 771
           ++    +  +A  VR+  +      + G   IE+ N  + F+ G  +   S+ +YS+L  
Sbjct: 627 LHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQSEAIYSYL-- 684

Query: 772 VPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
             E +TA+   +G           +EEEEKE +  +HSEKLA+AF L+ S++    IRI+
Sbjct: 685 --EKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLL-STEPGTEIRII 741

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN+R+C+ CH   K++S +    I + D+   HHF++G CSCGDYW
Sbjct: 742 KNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 204/442 (46%), Gaps = 36/442 (8%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D FV + L  +Y     +D AR+VF+ +   +   W+ ++   S      E VE F  MV
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMV 203

Query: 150 QDG-LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
            DG + PD      +L A     D   G+ +HS   K G++    V   ++++Y KCG +
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDV 263

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             AR  F+ M++ D VA+N++ISGY   G    +  LF ++    +     T   LI  +
Sbjct: 264 ESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVH 323

Query: 269 NQLGQCDVAM-----------------------------EMVKRMESLGITPD--VFTWT 297
           +  G   +A                              +M    ++    P+  + +W 
Sbjct: 324 SPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWN 383

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            MISG+AQNG T  A+ LF++M  + V PN +TI+S +SAC  L AL++G  +H +  + 
Sbjct: 384 AMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEE 443

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
               +V V  +LI+MY+KC  +  A R+F+ + +K+V SWN+MIAGY   G   +A +L+
Sbjct: 444 DLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLY 503

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
             M ++ + P   T+  ++      G  +E   +F+ M  +  +         ++    +
Sbjct: 504 KDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCMVDLLGR 563

Query: 478 LGQKNNALGVFRKMQSSCFYPN 499
            GQ   A  +  +   S   P 
Sbjct: 564 AGQLKEAFELISEFPKSAVGPG 585



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/432 (24%), Positives = 183/432 (42%), Gaps = 89/432 (20%)

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CRE 252
           V +++  +Y    ++  AR+ F+++   D V WN++++G        EA   F +M C  
Sbjct: 151 VASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGL----SGSEAVESFARMVCDG 206

Query: 253 EIKLGVVT-----------------------------------FNILIRSYNQLGQCDVA 277
            ++    T                                      LI  Y++ G  + A
Sbjct: 207 SVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESA 266

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
             +   ME     PD+  +  +ISG++ NG    +++LF E+  +G+ PN  T+ + I  
Sbjct: 267 RCLFDMMEK----PDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPV 322

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
            +      +   +H   +K GFT +  V  ++  ++ +  ++E+A + FD + +K + SW
Sbjct: 323 HSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESW 382

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG-------------N 444
           N+MI+GY Q G    A  LF +M + +V PN IT +  +S   Q G              
Sbjct: 383 NAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITE 442

Query: 445 ED---------EAVDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGV 487
           ED           +D++ + G   + +R        N  SWN++IAGY   GQ   AL +
Sbjct: 443 EDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKL 502

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           ++ M  +   P   T LSVL AC+           HG +    +E    V  S+ D YA 
Sbjct: 503 YKDMLDAHLLPTSATFLSVLYACS-----------HGGL----VEEGWKVFRSMTDDYAI 547

Query: 548 SGNIVYSRTIFD 559
           +  I +   + D
Sbjct: 548 NPGIEHCTCMVD 559



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/435 (22%), Positives = 191/435 (43%), Gaps = 64/435 (14%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFVKTKLLSVYAKCGCLDDAREVFED 116
            T  ++L A  +   + + R +H+F       +   V T L+S+Y+KCG ++ AR +F+ 
Sbjct: 213 TTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDM 272

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M + +L  ++A+I  YS +      V LF  ++  GL+P+      ++      G     
Sbjct: 273 MEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLA 332

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           + +H  V+K G +    V  ++  ++ +   +  AR+ F++M EK   +WN+MISGY Q 
Sbjct: 333 QCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQN 392

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF-- 294
           G  + A  LF++M +  ++   +T +  + +  QLG   +   + + +    + P+V+  
Sbjct: 393 GLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVM 452

Query: 295 -----------------------------TWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
                                        +W  MI+G+  +G+ ++AL L+K+M    ++
Sbjct: 453 TALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLL 512

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P   T  S + AC+           H   V+ G+     V  S+ + Y+    +E    +
Sbjct: 513 PTSATFLSVLYACS-----------HGGLVEEGWK----VFRSMTDDYAINPGIEHCTCM 557

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
            D++                +AG   +A+EL  +  +S V P V  W  L+   + + + 
Sbjct: 558 VDLLG---------------RAGQLKEAFELISEFPKSAVGPGV--WGALLGACMVHKDS 600

Query: 446 DEAVDLFQRMGKNDK 460
           D A    Q++ + D 
Sbjct: 601 DLAKLASQKLFELDP 615



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 7/146 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID---- 90
           NG    A+ + + +     +    T  + L AC    ++ L + LH    ++TE D    
Sbjct: 392 NGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLH---RIITEEDLEPN 448

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           V+V T L+ +YAKCG + +AR +F  M  +N+ +W+AMI  Y    +  E ++L+  M+ 
Sbjct: 449 VYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLD 508

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAG 176
             L P    F  +L AC + G  E G
Sbjct: 509 AHLLPTSATFLSVLYACSHGGLVEEG 534



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 13/166 (7%)

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           V ++L   Y     + ++R +FD + S D + WN+L+ G  L G    A++ F +M   G
Sbjct: 151 VASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAG--LSG--SEAVESFARMVCDG 206

Query: 597 -LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH---YSAMIDLYGRSGK 652
            ++P+  T  S++ A +    V +G+ V     +C     + EH    + +I LY + G 
Sbjct: 207 SVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKC----GLAEHEHVLTGLISLYSKCGD 262

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
           +E A   + DM  +PD   + AL++   ++G +  +V     L  L
Sbjct: 263 VESA-RCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTL 307


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 235/750 (31%), Positives = 370/750 (49%), Gaps = 110/750 (14%)

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           +F+ P +L+ACG     + GK +H  V+K G+                            
Sbjct: 94  NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGL---------------------------- 125

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
              ++D    N+++  Y +    + A  +FDKM                           
Sbjct: 126 ---DRDVFVGNALMLMYGECACVEYARLVFDKM--------------------------- 155

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
                  ME      DV +W+ MI   ++N     AL+L +EM+F+ V P+ V + S ++
Sbjct: 156 -------MER-----DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVN 203

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDD--VLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
              D   + MG  +H+  ++    +   V    +L++MY+KC  L  A ++F+ +  K V
Sbjct: 204 LFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTV 263

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI-----SGYIQNGNEDEA- 448
            SW +MIAG  ++    +  +LFI+MQE ++ PN IT   LI     +G +Q G +  A 
Sbjct: 264 VSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAY 323

Query: 449 ----------------VDLFQRMG--KNDKV------KRNTASWNSLIAGYQQLGQKNNA 484
                           VD++ +    +N +        R+   W ++++ Y Q    + A
Sbjct: 324 ILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQA 383

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
             +F +M++S   P  VTI+S+L  CA   A +  K +H  + +  +E    +  +L+D 
Sbjct: 384 FNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDM 443

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           YAK G+I  +  +F    S+DI  WN++I G+ +HG+   ALD+F +M+  G+KPN  TF
Sbjct: 444 YAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITF 503

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           + ++ A S AG+V  GKK+F  +   + ++P IEHY  M+DL GR+G L+EA E I+ MP
Sbjct: 504 IGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMP 563

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
           I+P++ +W AL+ ACR+H N  L  LA  +L ++EP +     L+  IYA   +  DA  
Sbjct: 564 IKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAG 623

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY----SDLLYSWLQNVPE-NVTAR 779
           VRK  +    +   G   IEV   V+ F+ G  S       +++L    + + E      
Sbjct: 624 VRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPD 683

Query: 780 SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYV 838
           +S   L I+EEEKE     HSEKLA+AF LI  S AP T IRIVKN+R+C  CH   K +
Sbjct: 684 TSTVLLNIDEEEKETALTYHSEKLAMAFGLI--STAPSTPIRIVKNLRVCNDCHAATKLL 741

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S ++   I + D    HHF+ G CSCGDYW
Sbjct: 742 SKIYGRVIIVRDRNRFHHFREGYCSCGDYW 771



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 131/487 (26%), Positives = 224/487 (45%), Gaps = 45/487 (9%)

Query: 62  NLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           ++L+AC   +   L +++H F L    + DVFV   L+ +Y +C C++ AR VF+ M ER
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 158

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           ++ +WS MI + SR++ +   +EL   M    + P +     ++    +  +   GK MH
Sbjct: 159 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 218

Query: 181 SLVIK------LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
           + VI+      +G+        ++L +Y KCG L  AR+ F  + +K  V+W +MI+G  
Sbjct: 219 AYVIRNSNNEHMGVPTT----TALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 274

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT---- 290
           +    +E  +LF +M  E I    +T   LI      G   +  ++   +   G +    
Sbjct: 275 RSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLA 334

Query: 291 ---------------------------PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
                                       DV  WT M+S +AQ     QA +LF +M   G
Sbjct: 335 LATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG 394

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V P  VTI S +S C    AL +G  +HS   K     D ++  +L++MY+KC ++ AA 
Sbjct: 395 VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAG 454

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
           R+F     +D+  WN++I G+   GY  +A ++F +M+   V PN IT+  L+      G
Sbjct: 455 RLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAG 514

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
              E   LF++M     +      +  ++    + G  + A  + + M      PN +  
Sbjct: 515 LVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMP---IKPNTIVW 571

Query: 504 LSVLPAC 510
            +++ AC
Sbjct: 572 GALVAAC 578



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 122/517 (23%), Positives = 229/517 (44%), Gaps = 61/517 (11%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTE-IDVFVKTK 96
           E I  ++ +  + ++V   + +NL     D+ ++ + + +HA++  N   E + V   T 
Sbjct: 181 ELIREMNFMQVRPSEVAMVSMVNLFA---DTANMRMGKAMHAYVIRNSNNEHMGVPTTTA 237

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           LL +YAKCG L  AR++F  + ++ + +W+AMI    R  R  E  +LF  M ++ +FP+
Sbjct: 238 LLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPN 297

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           +     ++  CG  G  + GK +H+ +++ G S    +  +++ +Y KC  +  AR  F+
Sbjct: 298 EITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFD 357

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------C-------- 250
           S   +D + W +M+S Y Q    D+A  LFD+M                  C        
Sbjct: 358 STQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDL 417

Query: 251 ---------REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                    +E +++  +    L+  Y + G  + A     R+    I+ D+  W  +I+
Sbjct: 418 GKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAA----GRLFIEAISRDICMWNAIIT 473

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV-KMGFT 360
           GFA +G   +ALD+F EM   GV PN +T    + AC+    +  G ++    V   G  
Sbjct: 474 GFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLV 533

Query: 361 DDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             +     ++++  +   L EA E +  M    +   W +++A  C+     +  EL   
Sbjct: 534 PQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA-CRLHKNPQLGEL-AA 591

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN--------TASWNSL 471
            Q  ++ P    +NVL+S      N        ++  K   +K+           + +  
Sbjct: 592 TQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEF 651

Query: 472 IAGYQ---QLGQKNNALG-VFRKMQSSCFYPNCVTIL 504
           + G Q   Q+ + N  L  + RK+  + + P+  T+L
Sbjct: 652 LMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVL 688



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 84/400 (21%), Positives = 175/400 (43%), Gaps = 40/400 (10%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL-VTEIDVFVKTK 96
           +++A  + D + T G +  + T ++LL  C  + ++ L + +H++++    E+D  + T 
Sbjct: 380 IDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTA 439

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+ +YAKCG ++ A  +F +   R++  W+A+I  ++      E +++F  M + G+ P+
Sbjct: 440 LVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPN 499

Query: 157 DFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D  F  +L AC + G    G KL   +V   G+         ++ +  + G L  A    
Sbjct: 500 DITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMI 559

Query: 216 ESMDEK-DGVAWNSMISG-----YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-Y 268
           +SM  K + + W ++++        Q+GE      L       EI+     +N+L+ + Y
Sbjct: 560 KSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLL-------EIEPENCGYNVLMSNIY 612

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG-----------FAQNGRTSQAL-DLF 316
               +   A  + K M+++G+  +       ++G             Q  R ++ L ++ 
Sbjct: 613 AAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMR 672

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK- 375
           ++++  G +P+    TS +    D +     +  HS  + M F       ++ I +    
Sbjct: 673 RKLNEAGYVPD----TSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNL 728

Query: 376 --CEELEAAERVFDMIKD-----KDVYSWNSMIAGYCQAG 408
             C +  AA ++   I       +D   ++    GYC  G
Sbjct: 729 RVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCG 768



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 9/103 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKL-----HAFLNLVTEI 89
           +G   EA+ +   +  QG K    T+I LL AC  +  +   +KL     H F  LV +I
Sbjct: 478 HGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTF-GLVPQI 536

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMR-ERNLYTWSAMIGA 131
           + +    ++ +  + G LD+A E+ + M  + N   W A++ A
Sbjct: 537 EHY--GCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA 577


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 253/826 (30%), Positives = 399/826 (48%), Gaps = 90/826 (10%)

Query: 88   EIDVFVKTKLLSVYAKCGC--LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
            E +V   T L+S YAK G   +  AR VF++MR RN  +WS M+  Y R   + E V LF
Sbjct: 303  EKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLF 362

Query: 146  FLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
              M   G+ P+ F+   ++ AC   G   + G  +H  V+K G+     V  +++  Y  
Sbjct: 363  CQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGS 422

Query: 205  CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
             G +  A++ FE M + + V+W S++ GY   G   E   ++ +M +E +     TF  +
Sbjct: 423  IGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATV 482

Query: 265  IRS----------YNQLGQ---------CDVAMEMVKRMESLGITP------------DV 293
              S          Y  LG            VA  ++    S                 D+
Sbjct: 483  TSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDI 542

Query: 294  FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
             +W  MIS +A +G   ++L  F  M  +    N  T++S +S C+ +  L  G  IH L
Sbjct: 543  ISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGL 602

Query: 354  AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
             VK+G   +V + N+L+ +YS+    E AE V                            
Sbjct: 603  VVKLGLDSNVCICNTLLTLYSEAGRSEDAELV---------------------------- 634

Query: 414  YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ---RMGKNDKVKRNTASWNS 470
               F  M E D+    I+WN +++ Y+Q+G   + + +     +MGK D+V     +WN+
Sbjct: 635  ---FQAMTERDL----ISWNSMMACYVQDGKCLDGLKILAELLQMGKPDRV-----TWNA 682

Query: 471  LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
            LI G+ +  + N A+  ++ ++      N +T++S L A A L    + +++HG V++  
Sbjct: 683  LIGGHAENEEPNEAVKAYKLIREKGIPANYITMVS-LAATANLAVLEEGQQLHGLVIKLG 741

Query: 531  LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
             ES L V N+ +D Y K G +     +     ++  ++WN LI  +  HG +  A + F 
Sbjct: 742  FESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFH 801

Query: 591  QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
            +M   G KP+  TF+S++ A +  G+VD G   + S+T  + + P IEH   +IDL GRS
Sbjct: 802  EMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRS 861

Query: 651  GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
            G+L  A  FI++MP+ P+   W +LL ACRIHGN++LA    E L +L+P D     L  
Sbjct: 862  GRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYS 921

Query: 711  QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY-------SD 763
             + A  GK ED   +RK    N  +      W+++K+ V++F   G  E Y       S 
Sbjct: 922  NVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSF---GMGEKYHPQASRISA 978

Query: 764  LLYSWLQNVPE-NVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
             L   ++   E      +S +   ++EE+KE     HSE+LALAF LI + ++  T+RI 
Sbjct: 979  KLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESS-TLRIF 1037

Query: 823  KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            KN+R+C  CH   K+VS +   +I L D    HHF  G+CSCGDYW
Sbjct: 1038 KNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSCGDYW 1083



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 178/695 (25%), Positives = 314/695 (45%), Gaps = 110/695 (15%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+  ++KCG ++DA  +F  M ER++ +W+AMIG Y+      +   +F  M++ GL PD
Sbjct: 133 LVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPD 192

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            +    +L+A    G       +H ++ +LG      V   ++  Y K G L  A+   +
Sbjct: 193 CYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRK 252

Query: 217 SMDEKDGVAWNSMISG----------------YFQIGENDEAHRLFDKMCREEIKLGVVT 260
            M +KD  +  ++I+G                Y + GE ++A R FD+M  +     V++
Sbjct: 253 GMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEKN----VIS 308

Query: 261 FNILIRSYNQLGQCDVAM------EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
           +  LI  Y + G   +A       EM  R E+        +W+ M+SG+ + G   +A+ 
Sbjct: 309 WTSLISGYAKHGYGHMAHARYVFDEMRHRNEA--------SWSTMLSGYVRVGLYEEAVG 360

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALA-MGMEIHSLAVKMGFTDDVLVGNSLINMY 373
           LF +M  +GV PNG  + S I+AC+    +A  G ++H   VK G   DV VG +L++ Y
Sbjct: 361 LFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFY 420

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
                +  A+++F+ + D +V SW S++ GY  +G  G+   ++ +M++  V  N  T+ 
Sbjct: 421 GSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFA 480

Query: 434 VLIS----------GY------IQNGNED-------------------EAVDLFQRMGKN 458
            + S          GY      IQ G ED                   EA  +F  M + 
Sbjct: 481 TVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNEC 540

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
           D +     SWN++I+ Y   G    +L  F  M+      N  T+ S+L  C+ +     
Sbjct: 541 DII-----SWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKW 595

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
            + IHG V++  L+S++ + N+L+  Y+++G    +  +F  M+ +D+I+WNS++  YV 
Sbjct: 596 GRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQ 655

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS-----------------------LAG 615
            G     L +  ++   G KP+R T+ ++I  H+                          
Sbjct: 656 DGKCLDGLKILAELLQMG-KPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYIT 714

Query: 616 MVDLGKKVFCSITECYQ-----IIPM-----IEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
           MV L      ++ E  Q     +I +     +   +A +D+YG+ G++ + ++ +   PI
Sbjct: 715 MVSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-PI 773

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
                 W  L++A   HG    A      +  L P
Sbjct: 774 NRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 808



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 147/547 (26%), Positives = 269/547 (49%), Gaps = 38/547 (6%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D  L+ KILQ C +    + G L+H+ +I  G      +   ++  YVK G +I AR  F
Sbjct: 29  DPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVF 88

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           + M E+  V+W +M+SGY Q G  ++A  LF  M       GV   + L+  +++ G+ +
Sbjct: 89  DGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRH----CGVKANHALVDFHSKCGKME 144

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            A  +   M    +  DV +W  MI G+A  G    +  +F+ M   G++P+  T+ S +
Sbjct: 145 DASYLFGTM----MERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVL 200

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
            A  +   L +  +IH +  ++G+    +V   LIN Y+K   L +A+ +   +  KD++
Sbjct: 201 RASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLF 260

Query: 396 SWNSMIAG----------------YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
           S  ++I G                Y ++G    A   F +M+E     NVI+W  LISGY
Sbjct: 261 SSTALITGYAHEGIYTMGNALIDMYAKSGEIEDAKRAFDEMEEK----NVISWTSLISGY 316

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
            ++G    A     R   ++   RN ASW+++++GY ++G    A+G+F +M      PN
Sbjct: 317 AKHGYGHMA---HARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPN 373

Query: 500 CVTILSVLPACA---YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
              + S++ AC+   Y+  +++  ++HG V++  +   + V  +L+  Y   G +  ++ 
Sbjct: 374 GFMVASLITACSRSGYM--ADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQK 431

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           +F+ M   ++++W SL+ GY   G     L+++ +M+  G+  N+ TF ++  +  L   
Sbjct: 432 LFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLED 491

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
             LG +V   I + Y     +   +++I ++     +EEA  ++ D   E D   W A++
Sbjct: 492 QVLGYQVLGHIIQ-YGFEDSVSVANSLISMFSSFSSVEEAC-YVFDHMNECDIISWNAMI 549

Query: 677 TACRIHG 683
           +A   HG
Sbjct: 550 SAYAHHG 556



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 144/328 (43%), Gaps = 40/328 (12%)

Query: 71  NSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAM- 128
           +++   R +H  +  L  + +V +   LL++Y++ G  +DA  VF+ M ER+L +W++M 
Sbjct: 591 DNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMM 650

Query: 129 ---------------------------------IGAYSRDQRWREVVELFFLMVQDGLFP 155
                                            IG ++ ++   E V+ + L+ + G+ P
Sbjct: 651 ACYVQDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGI-P 709

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
            +++    L A  N    E G+ +H LVIKLG      V N+ + +Y KCG++    +  
Sbjct: 710 ANYITMVSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKML 769

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
                +  ++WN +IS + + G   +A   F +M +   K   VTF  L+ + N  G  D
Sbjct: 770 PQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVD 829

Query: 276 VAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
             +     M    G+ P +    C+I    ++GR S A    KEM    V PN +   S 
Sbjct: 830 EGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMP---VPPNDLAWRSL 886

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDD 362
           ++AC     L +  +     +++  +DD
Sbjct: 887 LAACRIHGNLELARKTAEHLLELDPSDD 914



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 14/205 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N   NEA+     I  +G      T ++L  A  +   +   ++LH   + L  E D+ V
Sbjct: 690 NEEPNEAVKAYKLIREKGIPANYITMVSL-AATANLAVLEEGQQLHGLVIKLGFESDLHV 748

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
               + +Y KCG + D  ++      R+  +W+ +I A++R   +++  E F  M++ G 
Sbjct: 749 TNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 808

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMH-SLVIKLGM-----SCVRRVRNSVLAVYVKCGK 207
            PD   F  +L AC + G  + G   + S+  + G+      CV      ++ +  + G+
Sbjct: 809 KPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCV-----CIIDLLGRSGR 863

Query: 208 LIWARRFFESMD-EKDGVAWNSMIS 231
           L  A  F + M    + +AW S+++
Sbjct: 864 LSHAEGFIKEMPVPPNDLAWRSLLA 888


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 223/718 (31%), Positives = 356/718 (49%), Gaps = 50/718 (6%)

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKD----GVAWNSMISGYFQIGENDEAHRLFDK 248
           ++ N  L    K GKL  A  F + MD+ D      ++  +     ++    +   + D+
Sbjct: 53  KLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDR 112

Query: 249 MCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR 308
           + R          N L+R Y   G C    ++   M    +  ++ +W  +IS +A+NG 
Sbjct: 113 LRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEM----LMKNLVSWVIVISAYAKNGE 168

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
             +A+ LF +M   G+ PN     S + +C     L +G +IHS  ++     ++ V  +
Sbjct: 169 LEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETA 228

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           + NMY +C  LE A+ VFD +  ++  +W  ++ GY QA     A ELF +M    V  +
Sbjct: 229 ICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELD 288

Query: 429 VITWNVLI----------------SGYIQNGNEDEA------VDLFQRMGKNDKVKR--- 463
              +++++                S  ++ G E E       VD + + G  +   R   
Sbjct: 289 EFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFG 348

Query: 464 -----NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
                N  SW++LI+G+ Q G+  + + +F  ++S     N     SV  ACA     N 
Sbjct: 349 RISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNM 408

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
             + HG  ++R L S L   ++++  Y+K G + Y+R  F+ +   D + W ++I GY  
Sbjct: 409 GSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAY 468

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           HG    AL  F +M+S+G++PN  TF++++ A S +G+V   K+   S++  Y + P I+
Sbjct: 469 HGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTID 528

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
           HY  MID Y R+G L+EA+E I  MP EPD+  W++LL  C  H ++ L  +A E LF L
Sbjct: 529 HYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRL 588

Query: 699 EPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS 758
           +PGD     L+  +Y+  GK E+A  VRKL  E   +      WI VK  V+ FV G   
Sbjct: 589 DPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRH 648

Query: 759 ESYSDLLYSWLQNVPENVTARSSHSGLCIEEEE--------KEEISGIHSEKLALAFALI 810
              ++ +YS L+    +V    S   L  EE++        KE++   HSEKLA+AF LI
Sbjct: 649 HPQTEAIYSKLEEFKCSVI--DSPVRLLNEEDDVSCSLSARKEQLLD-HSEKLAIAFGLI 705

Query: 811 GSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            S++    I + KN+R C  CHE  K VSM+   +I + DS   HHFK+G+CSC DYW
Sbjct: 706 -STEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/525 (26%), Positives = 242/525 (46%), Gaps = 35/525 (6%)

Query: 18  KKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLAR 77
           K    +  + HL  L   G+L EA   L  +      V  ++Y  L +AC    S+   R
Sbjct: 48  KIQQGKLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGR 107

Query: 78  KLHAFLN-LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQ 136
            +H  L   V      ++  LL +Y  CG   D ++VF++M  +NL +W  +I AY+++ 
Sbjct: 108 LIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNG 167

Query: 137 RWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRN 196
              + + LF  M   G+ P+  ++  +LQ+C      E GK +HS VI+  ++    V  
Sbjct: 168 ELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVET 227

Query: 197 SVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL 256
           ++  +YV+CG L  A+  F+ MD ++ V W  ++ GY Q  + + A  LF +M  E ++L
Sbjct: 228 AICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVEL 287

Query: 257 GVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI--------------------------- 289
               F+I+++    L   D+  ++   +  LG                            
Sbjct: 288 DEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSF 347

Query: 290 ----TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
                P+  +W+ +ISGF+Q+GR    + +F  +   GV+ N    TS   AC     L 
Sbjct: 348 GRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLN 407

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
           MG + H  A+K G    +   ++++ MYSKC  L+ A R F+ I + D  +W ++I+GY 
Sbjct: 408 MGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYA 467

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
             G   +A   F +MQ   V PN +T+  +++    +G   EA      M ++  VK   
Sbjct: 468 YHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTI 527

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             ++ +I  Y + G    AL +  +M    F P+ ++  S+L  C
Sbjct: 528 DHYDCMIDTYSRAGLLQEALELINRMP---FEPDAMSWKSLLGGC 569


>gi|449442481|ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
 gi|449505311|ref|XP_004162432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
          Length = 679

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 218/618 (35%), Positives = 331/618 (53%), Gaps = 31/618 (5%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
            I S + L   D A+ + +R E      + + +  +I G A+N R   ++  F  M    
Sbjct: 80  FISSCSSLNSVDYAISIFQRFE----LKNSYLFNALIRGLAENSRFESSISFFVLMLKWK 135

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           + P+ +T    + +   L    +G  +H   +K G   D  V  SL++MY K EEL +A 
Sbjct: 136 ISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSAL 195

Query: 384 RVFD----MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
           +VFD     +K+  V  WN +I GYC+ G   KA ELF  M + D      +WN LI+G+
Sbjct: 196 KVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELFDSMPKKDTG----SWNSLINGF 251

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
           ++ G+   A +LF +M +     +N  SW +++ G+ Q G    AL  F  M      PN
Sbjct: 252 MKMGDMGRAKELFVKMPE-----KNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPN 306

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
             TI+S L ACA + A +    IH  +     + +L +  +L+D YAK GNI ++  +F 
Sbjct: 307 DYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFH 366

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
               K ++ W+ +I G+ +HG +  AL  F+ MK  G KP+   FL+++ A S +G V+ 
Sbjct: 367 ETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNE 426

Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
           G K F ++   Y I P ++HY+ ++D+ GR+G+L+EA++FI  MPI PD  +W AL  AC
Sbjct: 427 GLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMPITPDFVVWGALFCAC 486

Query: 680 RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFG 739
           R H N+++A LA ++L  LEP        +   YA  G+ +DA +VR   R++      G
Sbjct: 487 RTHKNVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDHGAHKDPG 546

Query: 740 QCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEE--------- 790
             +IEV + ++ FV G  + + +  +YS L    + ++A +   G   E E         
Sbjct: 547 WSFIEVDHKLHRFVAGDNTHNRAVEIYSKL----DEISASAREKGYTKEIECVLHNIEEE 602

Query: 791 EKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLAD 850
           EKEE  G HSEKLALAF ++ S++   T+RIVKN+R+CV CH   KY S M   EI L D
Sbjct: 603 EKEEALGYHSEKLALAFGIV-STRPGTTVRIVKNLRVCVDCHSFMKYASKMSKREIILRD 661

Query: 851 SKCLHHFKNGQCSCGDYW 868
            K  HHF +G CSCGDYW
Sbjct: 662 MKRFHHFNDGVCSCGDYW 679



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 238/459 (51%), Gaps = 25/459 (5%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNLVTEIDVF----VKTKLLSVYAKCGCLDDAREVFE 115
           +I+L+ A   SNS H  R++H  L      +VF    V T+ +S  +    +D A  +F+
Sbjct: 45  FIDLIHA---SNSTHKLRQIHGQL---YRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQ 98

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
               +N Y ++A+I   + + R+   +  F LM++  + PD   FP +L++     +   
Sbjct: 99  RFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGV 158

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE--KDG--VAWNSMIS 231
           G+ +H  ++K G+     VR S++ +YVK  +L  A + F+   E  K+G  + WN +I 
Sbjct: 159 GRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIH 218

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
           GY ++G+  +A  LFD M +++      ++N LI  + ++G    A E+  +M       
Sbjct: 219 GYCRMGDLVKATELFDSMPKKDTG----SWNSLINGFMKMGDMGRAKELFVKMPE----K 270

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           +V +WT M++GF+QNG   +AL+ F  M   G  PN  TI SA+SAC  + AL  G+ IH
Sbjct: 271 NVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIH 330

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           +     GF  ++++G +L++MY+KC  +E AE+VF   K+K +  W+ MI G+   G+  
Sbjct: 331 NYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFR 390

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
           KA + F  M+ +   P+ + +  +++    +G  +E +  F  M +   ++ +   +  +
Sbjct: 391 KALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLV 450

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +    + G+ + AL   R M  +   P+ V   ++  AC
Sbjct: 451 VDMLGRAGRLDEALKFIRAMPIT---PDFVVWGALFCAC 486



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 138/303 (45%), Gaps = 11/303 (3%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L++ + K G +  A+E+F  M E+N+ +W+ M+  +S++    + +E FF M+++G  P+
Sbjct: 247 LINGFMKMGDMGRAKELFVKMPEKNVVSWTTMVNGFSQNGDPEKALETFFCMLEEGARPN 306

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           D+     L AC   G  +AG  +H+ +   G      +  +++ +Y KCG +  A + F 
Sbjct: 307 DYTIVSALSACAKIGALDAGLRIHNYLSGNGFKLNLVIGTALVDMYAKCGNIEHAEKVFH 366

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
              EK  + W+ MI G+   G   +A + F+ M     K   V F  ++ + +  GQ + 
Sbjct: 367 ETKEKGLLIWSVMIWGWAIHGHFRKALQYFEWMKFTGTKPDSVVFLAVLNACSHSGQVNE 426

Query: 277 AMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            ++    M     I P +  +T ++    + GR  +AL   + M    + P+ V   +  
Sbjct: 427 GLKFFDNMRRGYLIEPSMKHYTLVVDMLGRAGRLDEALKFIRAMP---ITPDFVVWGALF 483

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI---NMYSKCEELEAAERVFDMIKDK 392
            AC   K     +E+  LA K     +     S +   N Y+     + AERV   ++D 
Sbjct: 484 CACRTHK----NVEMAELASKKLLQLEPKHPGSYVFLSNAYASVGRWDDAERVRVSMRDH 539

Query: 393 DVY 395
             +
Sbjct: 540 GAH 542



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 120/269 (44%), Gaps = 4/269 (1%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV 86
           T ++    NG   +A+     +  +GA+    T ++ L AC    ++    ++H +L+  
Sbjct: 277 TMVNGFSQNGDPEKALETFFCMLEEGARPNDYTIVSALSACAKIGALDAGLRIHNYLSGN 336

Query: 87  T-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
             ++++ + T L+ +YAKCG ++ A +VF + +E+ L  WS MI  ++    +R+ ++ F
Sbjct: 337 GFKLNLVIGTALVDMYAKCGNIEHAEKVFHETKEKGLLIWSVMIWGWAIHGHFRKALQYF 396

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
             M   G  PD  +F  +L AC + G    G K   ++     +    +    V+ +  +
Sbjct: 397 EWMKFTGTKPDSVVFLAVLNACSHSGQVNEGLKFFDNMRRGYLIEPSMKHYTLVVDMLGR 456

Query: 205 CGKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
            G+L  A +F  +M    D V W ++     +  +N E   L  K   +       ++  
Sbjct: 457 AGRLDEALKFIRAMPITPDFVVWGALFCAC-RTHKNVEMAELASKKLLQLEPKHPGSYVF 515

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPD 292
           L  +Y  +G+ D A  +   M   G   D
Sbjct: 516 LSNAYASVGRWDDAERVRVSMRDHGAHKD 544



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/245 (19%), Positives = 106/245 (43%), Gaps = 38/245 (15%)

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
           +++K+++IHG + R ++ SS  V+   I + +   ++ Y+ +IF     K+   +N+LI 
Sbjct: 54  STHKLRQIHGQLYRCNVFSSSRVVTQFISSCSSLNSVDYAISIFQRFELKNSYLFNALIR 113

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT------ 628
           G   +  + +++  F  M  + + P+R TF  ++ + +      +G+ + C I       
Sbjct: 114 GLAENSRFESSISFFVLMLKWKISPDRLTFPFVLKSAAALSNGGVGRALHCGILKFGLEF 173

Query: 629 ECYQIIPMIEHY----------------------------SAMIDLYGRSGKLEEAMEFI 660
           + +  + +++ Y                            + +I  Y R G L +A E  
Sbjct: 174 DSFVRVSLVDMYVKVEELGSALKVFDESPESVKNGSVLIWNVLIHGYCRMGDLVKATELF 233

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
           + MP + D+  W +L+      G++  A    E    +   +V+    ++  ++  G PE
Sbjct: 234 DSMP-KKDTGSWNSLINGFMKMGDMGRAK---ELFVKMPEKNVVSWTTMVNGFSQNGDPE 289

Query: 721 DALKV 725
            AL+ 
Sbjct: 290 KALET 294


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 258/893 (28%), Positives = 414/893 (46%), Gaps = 102/893 (11%)

Query: 59   TYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
            T+I  L AC    S+     LH+ L+  +   D      L+++Y KCG  + A  VF+ M
Sbjct: 235  TFITALGAC---TSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAM 291

Query: 118  RER---NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG-DF 173
              R   +L +W+AMI A     R  + + +F  +  +G+ P+      IL A    G DF
Sbjct: 292  ASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDF 351

Query: 174  EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK-DGVAWNSMISG 232
             A +  H  + + G      + N+++++Y KCG    A   F  +  K D ++WN+M+  
Sbjct: 352  GAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGA 411

Query: 233  -------------------------------YFQIGENDEA-------HRLFDKMCREEI 254
                                                 N EA       H L     R+ +
Sbjct: 412  SEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYV 471

Query: 255  KLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
            +  V T  +L+  Y + G    A  + K M     +  + TW  M+  +AQN R+ +A  
Sbjct: 472  ESSVAT--MLVSMYGKCGSISEAELVFKEMPL--PSRSLVTWNVMLGAYAQNDRSKEAFG 527

Query: 315  LFKEMSFVGVMPNGVTITSAISAC-TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
               EM   GV+P+ ++ TS +S+C    +A  + M I    ++ G+    L   +LI+M+
Sbjct: 528  ALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCI----LESGYRSACL-ETALISMH 582

Query: 374  SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW- 432
             +C ELE A  VF+ +   DV SW +M++   +     + + LF +MQ   V P+  T  
Sbjct: 583  GRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLA 642

Query: 433  ----------------------------------NVLISGYIQNGNEDEAVDLFQRMGKN 458
                                              N L++ Y   G+  EA+  F+ M   
Sbjct: 643  TTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKAR 702

Query: 459  DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
            D V     SWN + A Y Q G    A+ +FR+MQ     P+ +T  + L         + 
Sbjct: 703  DLV-----SWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSD 757

Query: 519  VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
             K  H       L+S + V   L+  YAK G +  + ++F G     ++  N++I     
Sbjct: 758  GKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQ 817

Query: 579  HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
            HGF   A+ +F +M+  G++P+  T +SII A   AGMV+ G   F ++ E + I P +E
Sbjct: 818  HGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLE 877

Query: 639  HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
            HY+  +DL GR+G+LE A + I  MP E ++ +W +LL  C++ G+ +L     +R+ +L
Sbjct: 878  HYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILEL 937

Query: 699  EPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS 758
            +P +     ++  IY   GK +DA   RK   +   +N+ G  W E+   V+ FV G  S
Sbjct: 938  DPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRS 997

Query: 759  ESYSDLLYSWLQNVPENVTARSSH---SGLCIEEEEKEEISGIHSEKLALAFALIGSSQA 815
               +D +Y  L  + E +  R+ +    GL +E+E KE+  G HSE++A+AF LI ++  
Sbjct: 998  HPKTDEIYVVLDKL-ELLMRRAGYEADKGLDVEDELKEKALGYHSERIAIAFGLI-ATPP 1055

Query: 816  PHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              T++IVKN+R+C  CH   KY+SM+   EI + DS   HHF NG CSC D W
Sbjct: 1056 ETTLKIVKNLRVCGDCHTATKYISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  226 bits (576), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 168/681 (24%), Positives = 306/681 (44%), Gaps = 86/681 (12%)

Query: 60  YINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           Y  LLQ+C+DSN +   +  H  + N   E  +F+   L+++Y +CG L++A  +F  M 
Sbjct: 28  YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELF-FLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
           ERN+ +W+A+I A ++   +     LF  ++++    P+ +    +L AC N  D   G+
Sbjct: 88  ERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGR 147

Query: 178 LMHSLVIKLGM----SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
            +H+++ +LG+    +    V N+++ +Y KCG L  A   F ++ EKD V+W +M   Y
Sbjct: 148 SIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAY 207

Query: 234 FQIGE-NDEAHRLFDKMCREEIKLGVVTF------------------------------- 261
            Q      +A R+F +M  + +   V+TF                               
Sbjct: 208 AQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSLRDGTWLHSLLHEASLGFDPLA 267

Query: 262 -NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
            N LI  Y + G  + A  + K M S     D+ +W  MIS   + GR   A+ +F+ + 
Sbjct: 268 SNALINMYGKCGDWEGAYSVFKAMASRQ-ELDLVSWNAMISASVEAGRHGDAMAIFRRLR 326

Query: 321 FVGVMPNGVTITSAISACTDLKA-LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
             G+ PN VT+ + ++A              H    + G+  DV++GN++I+MY+KC   
Sbjct: 327 LEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFF 386

Query: 380 EAAERVFDMIKDK-DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------ 432
            AA  VF  I+ K DV SWN+M+         GK    F  M  + + PN +++      
Sbjct: 387 SAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNA 446

Query: 433 ------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                          +L+S Y + G+  EA  +F+ M       
Sbjct: 447 CSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEM---PLPS 503

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
           R+  +WN ++  Y Q  +   A G   +M      P+ ++  SVL +C     S + + +
Sbjct: 504 RSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSC---YCSQEAQVL 560

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
             C+L     S+  +  +LI  + +   +  +R++F+ M   D+++W +++     +  +
Sbjct: 561 RMCILESGYRSAC-LETALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDF 619

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
               +LF +M+  G+ P++ T  + +     +  + LGK +   +TE   +   I   +A
Sbjct: 620 KEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTE-IGLEADIAVENA 678

Query: 643 MIDLYGRSGKLEEAMEFIEDM 663
           ++++Y   G   EA+ F E M
Sbjct: 679 LLNMYSNCGDWREALSFFETM 699



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 163/676 (24%), Positives = 305/676 (45%), Gaps = 83/676 (12%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-----LNLVTEIDVFVKTKLLSVYAKCGCLDDAREV 113
           T + +L AC +S  + + R +HA      L   +     V   ++++YAKCG L+DA  V
Sbjct: 129 TLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAV 188

Query: 114 FEDMRERNLYTWSAMIGAYSRDQR-WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD 172
           F  + E+++ +W+AM GAY++++R + + + +F  M+   L P+   F   + A G C  
Sbjct: 189 FLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITF---ITALGACTS 245

Query: 173 FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM---DEKDGVAWNSM 229
              G  +HSL+ +  +       N+++ +Y KCG    A   F++M    E D V+WN+M
Sbjct: 246 LRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAM 305

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------------------------- 261
           IS   + G + +A  +F ++  E ++   VT                             
Sbjct: 306 ISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESG 365

Query: 262 --------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
                   N +I  Y + G    A  + +R+       DV +W  M+          + +
Sbjct: 366 YLRDVVIGNAIISMYAKCGFFSAAWAVFRRIR---WKCDVISWNTMLGASEDRKSFGKVV 422

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV--KMGFTDDVLVGNSLIN 371
           + F  M   G+ PN V+  + ++AC++ +AL  G +IHSL +  +  + +   V   L++
Sbjct: 423 NTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESS-VATMLVS 481

Query: 372 MYSKCEELEAAERVFD--MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           MY KC  +  AE VF    +  + + +WN M+  Y Q     +A+   ++M +  V P+ 
Sbjct: 482 MYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDA 541

Query: 430 ITWN------------------VLISGYIQNGNEDEAVDLFQRMGKNDKVKR-------- 463
           +++                   +L SGY     E   + +  R  + ++ +         
Sbjct: 542 LSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFNEMDHG 601

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           +  SW ++++   +         +FR+MQ     P+  T+ + L  C         K IH
Sbjct: 602 DVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIH 661

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
            CV    LE+ + V N+L++ Y+  G+   + + F+ M ++D+++WN +   Y   G   
Sbjct: 662 ACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAK 721

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            A+ LF QM+  G+KP++ TF + +     + +V  G K+F ++     +   +   + +
Sbjct: 722 EAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDG-KLFHALAAESGLDSDVSVATGL 780

Query: 644 IDLYGRSGKLEEAMEF 659
           + LY + GKL+EAM  
Sbjct: 781 VKLYAKCGKLDEAMSL 796



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 231/488 (47%), Gaps = 50/488 (10%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N LI  Y + G  + A  +  +ME      +V +WT +IS  AQ G  ++A  LF+ M  
Sbjct: 64  NCLINMYVRCGSLEEAHAIFSKMEE----RNVVSWTALISANAQCGAFARAFALFRTMLL 119

Query: 322 -VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF----TDDVLVGNSLINMYSKC 376
                PN  T+ + ++AC + + LA+G  IH++  ++G     T   LVGN++INMY+KC
Sbjct: 120 ESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKC 179

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAG-YCGKAYELFIKMQESDVPPNVITW--- 432
             LE A  VF  I +KDV SW +M   Y Q   +   A  +F +M    + PNVIT+   
Sbjct: 180 GSLEDAIAVFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITA 239

Query: 433 -----------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
                                        N LI+ Y + G+ + A  +F+ M    ++  
Sbjct: 240 LGACTSLRDGTWLHSLLHEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQEL-- 297

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA-CAYLVASNKVKEI 522
           +  SWN++I+   + G+  +A+ +FR+++     PN VT++++L A  A  V     +  
Sbjct: 298 DLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGF 357

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLHGF 581
           HG +        + + N++I  YAK G    +  +F  +  K D+I+WN+++        
Sbjct: 358 HGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKS 417

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
           +   ++ F  M   G+ PN+ +F++I+ A S +  +D G+K+   I    +        +
Sbjct: 418 FGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVAT 477

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSI-WEALLTACRIHGNIDLAVLAIERLFDLEP 700
            ++ +YG+ G + EA    ++MP+   S + W  +L A   +   D +  A   L ++  
Sbjct: 478 MLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGA---YAQNDRSKEAFGALMEMLQ 534

Query: 701 GDVLIQRL 708
           G VL   L
Sbjct: 535 GGVLPDAL 542



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 176/393 (44%), Gaps = 56/393 (14%)

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           T+ + +C D   LA G   H L    G    + +GN LINMY +C  LE A  +F  +++
Sbjct: 29  TALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEE 88

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKM-QESDVPPNVIT------------------- 431
           ++V SW ++I+   Q G   +A+ LF  M  ES   PN  T                   
Sbjct: 89  RNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRS 148

Query: 432 -----W---------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                W               N +I+ Y + G+ ++A+ +F  + + D V     SW ++
Sbjct: 149 IHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVV-----SWTAM 203

Query: 472 IAGYQQLGQ-KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
              Y Q  +   +AL +FR+M      PN +T ++ L AC  L        +H  +   S
Sbjct: 204 AGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTSL---RDGTWLHSLLHEAS 260

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK---DIITWNSLICGYVLHGFWHAALD 587
           L       N+LI+ Y K G+   + ++F  M+S+   D+++WN++I   V  G    A+ 
Sbjct: 261 LGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMA 320

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG--KKVFCSITECYQIIPMIEHYSAMID 645
           +F +++  G++PN  T ++I+ A + +G VD G  +     I E   +  ++   +A+I 
Sbjct: 321 IFRRLRLEGMRPNSVTLITILNALAASG-VDFGAARGFHGRIWESGYLRDVVIG-NAIIS 378

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           +Y + G    A      +  + D   W  +L A
Sbjct: 379 MYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGA 411


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 250/904 (27%), Positives = 421/904 (46%), Gaps = 114/904 (12%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           +T+  L+  C   + +   R++H   L    E+  F+  +LL++Y KCG  ++AR VF+ 
Sbjct: 41  STFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQG 100

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           ++++++  W+++IG  +R    +E   LF  M   G+ P+D  +  +L ACG+  + +  
Sbjct: 101 IQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDTI 160

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           +        L +  +  V  +V+  Y KCG L  A   F+ +  +D   WN+MIS     
Sbjct: 161 RARVEACGSLELDVI--VATAVMNAYGKCGDLDSAWGVFDGILVRDAAVWNAMISLLVAH 218

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFN---------------------------------- 262
            + DEA  LF +M     +LG VT N                                  
Sbjct: 219 EQGDEALELFRQM-----RLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDA 273

Query: 263 ------ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 316
                  L+  Y + G+ D A E+ +R++      DV +W  M++  A NG   +A   F
Sbjct: 274 DTVVQTALVNMYGKFGKVDDAEEIFERIQE----RDVVSWNAMLTANACNGFHDKAFKCF 329

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF---TDDVLVGNSLINMY 373
           +EM  VG +P+ +T  + ++AC     L  G  + +LAV+ G    + DV++G +++NMY
Sbjct: 330 REMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMY 389

Query: 374 SKCEELEAA-ERVFDMIKDKD---VYSWNSMIAGYCQAGYCGKAYELFIKM--------- 420
           S+C+  ++A      + +D+D   +  WN++++ Y +     +A+ +F  M         
Sbjct: 390 SRCKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDT 449

Query: 421 --------------------------QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQR 454
                                      ES++       N L++ Y + G+ ++A ++F  
Sbjct: 450 VSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDA 509

Query: 455 MGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV 514
           M       RN  SW +++  + QLG    AL +FR +      PN VT  +VL AC  L 
Sbjct: 510 M-----TTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLA 564

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
           +    K +  C+       ++ V N L+ T  K G++      F  M+ K+ ++WN+ I 
Sbjct: 565 SIPAAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIA 624

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
               HG     ++LF  M+  G+     T + ++ + S AG+V  G   F ++   Y   
Sbjct: 625 ANAQHGNGVRGVELFQTMQLEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFP 684

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI-WEALLTACRIHGNIDLAVLAIE 693
              EHYS +IDL  R+G LE A EF++ +P    S   W  LL  C++HG+++    A +
Sbjct: 685 AEAEHYSCVIDLLSRAGWLEHAEEFVKRLPFGDQSVFPWITLLCGCKLHGDLERGGRATQ 744

Query: 694 RLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFV 753
           R+  L PG      ++  +YA  GK  +A  VRK   E   +   G  WIEVK  ++ F 
Sbjct: 745 RILGLNPGSTGPYLVMHNLYAGAGKWPEAAAVRKSMVELGPKKEPGLSWIEVKGRIHEFR 804

Query: 754 TGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLA 804
            G  S   S  ++  L+ + E +      +G           ++ +EKE +   HSEKLA
Sbjct: 805 VGDTSHPRSSEIHRELERLNEEM----KRAGFVCDIKAVVYDLQAKEKESLLCQHSEKLA 860

Query: 805 LAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
           +AF LI S+ A   +RI+KN+R+C  CH   K++S +   EI + D+   HHF+ G CSC
Sbjct: 861 IAFGLI-STAAGEPLRIMKNLRVCSDCHSATKFISGLVGREIVVRDAYRFHHFRGGACSC 919

Query: 865 GDYW 868
            D+W
Sbjct: 920 EDFW 923



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 147/599 (24%), Positives = 268/599 (44%), Gaps = 76/599 (12%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D   F  ++  C    D   G+ +H L+++ G+     +   +LA+Y KCG    AR  F
Sbjct: 39  DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-------------------------- 249
           + + +K  VAW S+I    + G   EA  LF +M                          
Sbjct: 99  QGIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVD 158

Query: 250 ---CREE----IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
               R E    ++L V+    ++ +Y + G  D A  +   +    +  D   W  MIS 
Sbjct: 159 TIRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGI----LVRDAAVWNAMISL 214

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
              + +  +AL+LF++M   GV PN  T  +A++AC   +  +  + IH+ A ++    D
Sbjct: 215 LVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDAD 274

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
            +V  +L+NMY K  +++ AE +F+ I+++DV SWN+M+      G+  KA++ F +M  
Sbjct: 275 TVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLL 334

Query: 423 SDVPPNVITWNVLISG----------------YIQNGNEDEAVD---------LFQR--- 454
               P+ IT+  +++                  ++ G   E+VD         ++ R   
Sbjct: 335 VGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKS 394

Query: 455 ---------MGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
                    + + D+ + +   WN++++ Y +  Q   A  +FR M       + V++++
Sbjct: 395 PKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMT 454

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           V  AC    +  K K IH  +    L    PV N+L+  YA+ G++  +R IFD M++++
Sbjct: 455 VFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRN 514

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
           +I+W +++  +   G    AL +F  +   G+ PN  TF +++ A      +   K V  
Sbjct: 515 VISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQA 574

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
            ++E       +E  + ++   G+ G LEE   F + M ++   S W   + A   HGN
Sbjct: 575 CLSET-GFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVS-WNTAIAANAQHGN 631



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 199/446 (44%), Gaps = 47/446 (10%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVT 87
           +  L  + + +EA+ +   +   G    + T +  L AC  S     A ++HAF   L  
Sbjct: 212 ISLLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAG 271

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + D  V+T L+++Y K G +DDA E+FE ++ER++ +W+AM+ A + +    +  + F  
Sbjct: 272 DADTVVQTALVNMYGKFGKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFRE 331

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK--LGMSCVRRVRNS-VLAVYVK 204
           M+  G  P    +  IL AC      + G  + +L ++   G+  V  V  + ++ +Y +
Sbjct: 332 MLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSR 391

Query: 205 C--GKLIWARRFF--ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           C   K  ++      +  D+   + WN+++S Y +  + +EA  +F  M    + +  V+
Sbjct: 392 CKSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVS 451

Query: 261 F-----------------------------------NILIRSYNQLGQCDVAMEMVKRME 285
                                               N L+  Y +LG  + A E+   M 
Sbjct: 452 LMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAM- 510

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
               T +V +WT M+   +Q G   +AL +F+ +   GV PN VT T+ ++AC +L ++ 
Sbjct: 511 ---TTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIP 567

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
               + +   + GF  +V V N L+    KC  LE     F ++  K+  SWN+ IA   
Sbjct: 568 AAKLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANA 627

Query: 406 QAGYCGKAYELFIKMQESDVPPNVIT 431
           Q G   +  ELF  MQ   +    +T
Sbjct: 628 QHGNGVRGVELFQTMQLEGIDTGSVT 653



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 143/301 (47%), Gaps = 8/301 (2%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T L     N +  EA T+   +   G  +   + + +  AC  S S+   + +H+   L
Sbjct: 418 NTVLSLYVENEQFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIHS---L 474

Query: 86  VTEIDVFVKTK----LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           +TE ++  KT     L+++YA+ G L+DARE+F+ M  RN+ +W+AM+G +S+    RE 
Sbjct: 475 LTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNREA 534

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
           + +F  ++ +G+ P++  F  +L ACGN     A KL+ + + + G      V N +L  
Sbjct: 535 LRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLLCT 594

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
             KCG L     FF+ M  K+ V+WN+ I+   Q G       LF  M  E I  G VT 
Sbjct: 595 LGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSVTL 654

Query: 262 NILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
             ++ S +  G           M    G   +   ++C+I   ++ G    A +  K + 
Sbjct: 655 IGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKRLP 714

Query: 321 F 321
           F
Sbjct: 715 F 715


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 225/724 (31%), Positives = 361/724 (49%), Gaps = 68/724 (9%)

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A + F+ M++ D   WN MI G+   G   EA + + +M    +K    T+  +I+S   
Sbjct: 83  ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142

Query: 271 LGQCDVAMEMVKRMESLGITPDVF-------------------------------TWTCM 299
           +   +   ++   +  LG   DV+                               +W  M
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           ISG+   G    +L LFKEM   G  P+  +  SA+ AC+ + +  MG EIH  AV+   
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262

Query: 360 -TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
            T DV+V  S+++MYSK  E+  AER+F+ +  +++ +WN MI  Y + G    A+  F 
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322

Query: 419 KMQESD-VPPNVIT-WNVLISGYIQNGN-----------------EDEAVDLFQRMGK-- 457
           KM E + + P+VIT  N+L +  I  G                  E   +D++   G+  
Sbjct: 323 KMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLK 382

Query: 458 ------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
                 +   ++N  SWNS+IA Y Q G+  +AL +F+++  S   P+  TI S+LPA A
Sbjct: 383 SAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYA 442

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
             ++ ++ +EIH  +++    S+  ++NSL+  YA  G++  +R  F+ +  KD+++WNS
Sbjct: 443 ESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNS 502

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
           +I  Y +HGF   ++ LF +M +  + PN+ TF S++ A S++GMVD G + F S+   Y
Sbjct: 503 IIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREY 562

Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
            I P IEHY  M+DL GR+G    A  F+E+MP  P + IW +LL A R H +I +A  A
Sbjct: 563 GIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFA 622

Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
            E++F +E  +     L+L +YA  G+ ED  +++ L        +  +  +E K   + 
Sbjct: 623 AEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHV 682

Query: 752 FVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEI-------SGIHSEKLA 804
           F  G  S   ++ +Y  L  V   V     +   C+     E +          HS +LA
Sbjct: 683 FTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVH-CVSRLRPETLVKSRSNSPRRHSVRLA 741

Query: 805 LAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
             F LI S++    + +  N R+C  CHE  +  S +   EI + DSK  HHF NG+CSC
Sbjct: 742 TCFGLI-STETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSC 800

Query: 865 GDYW 868
           G+YW
Sbjct: 801 GNYW 804



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/489 (27%), Positives = 230/489 (47%), Gaps = 85/489 (17%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T+ L  +A    ++DA ++F++M + + + W+ MI  ++    + E V+ +  MV  G+ 
Sbjct: 68  TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            D F +P ++++       E GK +H++VIKLG      V NS++++Y+K G    A + 
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------------- 249
           FE M E+D V+WNSMISGY  +G+   +  LF +M                         
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247

Query: 250 ----------CREEIKLG-VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
                      R  I+ G V+    ++  Y++ G+   A  +   M    I  ++  W  
Sbjct: 248 KMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM----IQRNIVAWNV 303

Query: 299 MISGFAQNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           MI  +A+NGR + A   F++MS   G+ P+ +T  + + A     A+  G  IH  A++ 
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRR 359

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           GF   +++  +LI+MY +C +L++AE +FD + +K+V SWNS+IA Y Q G    A ELF
Sbjct: 360 GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELF 419

Query: 418 IKMQESDVPP-----------------------------------NVITWNVLISGYIQN 442
            ++ +S + P                                   N I  N L+  Y   
Sbjct: 420 QELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMC 479

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G+ ++A   F     N  + ++  SWNS+I  Y   G    ++ +F +M +S   PN  T
Sbjct: 480 GDLEDARKCF-----NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKST 534

Query: 503 ILSVLPACA 511
             S+L AC+
Sbjct: 535 FASLLAACS 543



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 236/504 (46%), Gaps = 41/504 (8%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLL 98
           EA+     +   G K    TY  ++++    +S+   +K+HA  + L    DV+V   L+
Sbjct: 113 EAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLI 172

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
           S+Y K GC  DA +VFE+M ER++ +W++MI  Y         + LF  M++ G  PD F
Sbjct: 173 SLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRF 232

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR-RVRNSVLAVYVKCGKLIWARRFFES 217
                L AC +    + GK +H   ++  +      V  S+L +Y K G++ +A R F  
Sbjct: 233 STMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNG 292

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-IKLGVVTF--------------- 261
           M +++ VAWN MI  Y + G   +A   F KM  +  ++  V+T                
Sbjct: 293 MIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTI 352

Query: 262 ----------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ 305
                             LI  Y + GQ   A  +  RM       +V +W  +I+ + Q
Sbjct: 353 HGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAE----KNVISWNSIIAAYVQ 408

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
           NG+   AL+LF+E+    ++P+  TI S + A  +  +L+ G EIH+  VK  +  + ++
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
            NSL++MY+ C +LE A + F+ I  KDV SWNS+I  Y   G+   +  LF +M  S V
Sbjct: 469 LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV 528

Query: 426 PPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL 485
            PN  T+  L++    +G  DE  + F+ M +   +      +  ++     +G+  N  
Sbjct: 529 NPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCML---DLIGRTGNFS 585

Query: 486 GVFRKMQSSCFYPNCVTILSVLPA 509
              R ++   F P      S+L A
Sbjct: 586 AAKRFLEEMPFVPTARIWGSLLNA 609



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 189/437 (43%), Gaps = 19/437 (4%)

Query: 35  NGRLNEAITVLDSIATQ-GAKVRRNTYINLL--QACIDSNSIHLARKLHAFLNLVTEIDV 91
           NGR+ +A      ++ Q G +    T INLL   A ++  +IH       FL       +
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLP-----HM 365

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            ++T L+ +Y +CG L  A  +F+ M E+N+ +W+++I AY ++ +    +ELF  +   
Sbjct: 366 VLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDS 425

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            L PD      IL A         G+ +H+ ++K        + NS++ +Y  CG L  A
Sbjct: 426 SLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDA 485

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R+ F  +  KD V+WNS+I  Y   G    +  LF +M    +     TF  L+ + +  
Sbjct: 486 RKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSIS 545

Query: 272 GQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  D   E  + M+   GI P +  + CM+    + G  S A    +EM FV   P    
Sbjct: 546 GMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV---PTARI 602

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
             S ++A  + K + +         KM   D+      L+NMY++    E   R+  +++
Sbjct: 603 WGSLLNASRNHKDITIAEFAAEQIFKMEH-DNTGCYVLLLNMYAEAGRWEDVNRIKLLME 661

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
            K +    S  +        GK++ +F     S V  N I + VL       G ED  V 
Sbjct: 662 SKGI----SRTSSRSTVEAKGKSH-VFTNGDRSHVATNKI-YEVLDVVSRMVGEEDIYVH 715

Query: 451 LFQRMGKNDKVKRNTAS 467
              R+     VK  + S
Sbjct: 716 CVSRLRPETLVKSRSNS 732



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 134/283 (47%), Gaps = 10/283 (3%)

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           + G+  +   ++A+ LF  M K D        WN +I G+   G    A+  + +M  + 
Sbjct: 71  LRGFADSRLMEDALQLFDEMNKADAFL-----WNVMIKGFTSCGLYIEAVQFYSRMVFAG 125

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
              +  T   V+ + A + +  + K+IH  V++    S + V NSLI  Y K G    + 
Sbjct: 126 VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAE 185

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            +F+ M  +DI++WNS+I GY+  G   ++L LF +M   G KP+R + +S + A S   
Sbjct: 186 KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVY 245

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
              +GK++ C           +   ++++D+Y + G++  A      M I+ +   W  +
Sbjct: 246 SPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVM 304

Query: 676 LTACRIHGNIDLAVLAIERLFD---LEPGDVLIQRLILQIYAI 715
           +     +G +  A L  +++ +   L+P DV+    +L   AI
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQP-DVITSINLLPASAI 346



 Score = 47.0 bits (110), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 6/145 (4%)

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
           P +   +  +A S  +  +  +FD M+  D   WN +I G+   G +  A+  + +M   
Sbjct: 65  PALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA 124

Query: 596 GLKPNRGTFLSIILAHSLAGMVDL--GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
           G+K +  T+  +I   S+AG+  L  GKK+   + +    +  +   +++I LY + G  
Sbjct: 125 GVKADTFTYPFVI--KSVAGISSLEEGKKIHAMVIKL-GFVSDVYVCNSLISLYMKLGCA 181

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTA 678
            +A +  E+MP E D   W ++++ 
Sbjct: 182 WDAEKVFEEMP-ERDIVSWNSMISG 205


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 251/828 (30%), Positives = 383/828 (46%), Gaps = 164/828 (19%)

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           ++Y W+ +I            + LF  M      PD + FP + +ACG   +FE G  +H
Sbjct: 90  SVYWWNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIH 149

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
             VI+LG      V N+V+++Y KC  ++                               
Sbjct: 150 GCVIRLGFESNVFVCNAVISMYGKCKAVV------------------------------- 178

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            A ++FD++C                     G CD                   TW  ++
Sbjct: 179 HARKVFDELCYR-------------------GICDSV-----------------TWNSIV 202

Query: 301 SGFAQNGRTSQALDLFKEMSF-VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           S ++     + A+ LF+EM+   G++P+ V + + +  C  L     G ++H   V+ G 
Sbjct: 203 SVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGL 262

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM------------------- 400
            +DV VGN+L++MY+KC ++E A +VF+ ++ KDV +WN+M                   
Sbjct: 263 VEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGK 322

Query: 401 ----------------IAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-----GY 439
                           I+GY Q G+  +A ++F +M      PNV+T   L+S     G 
Sbjct: 323 MREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGA 382

Query: 440 IQNGNEDE--AVDLFQRMGKNDKVK--------------------------------RNT 465
           + +G E    +V    +   ND                                   R+ 
Sbjct: 383 LLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDV 442

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKM--QSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
            +W  +I GY Q G  N+AL +F +M    +C  PN  TI  VL ACA L A    K+IH
Sbjct: 443 VTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIH 502

Query: 524 GCVLRRSLESS--LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
             VLRRS   S  L V N LID Y+KSG++  ++ +FD MS ++ ++W SL+ GY +HG 
Sbjct: 503 AYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGR 562

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
              A  +FD+M+   L  +  TFL ++ A S +GM D G            + P +EHY+
Sbjct: 563 SEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGM-DFG------------VDPGVEHYA 609

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            M+DL GR+G+L EAM  I DMPIEP   +W ALL+ACRIH N +LA  A ++L +L+  
Sbjct: 610 CMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKAD 669

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
           +     L+  IYA   + +D  ++  L +    +   G  W++ +  + TF  G  +   
Sbjct: 670 NDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQ 729

Query: 762 SDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIG-SSQAPHTIR 820
           S  +Y  L ++ + + A  S     +++EEK +    HSEKLALA+A++     AP  IR
Sbjct: 730 SQKIYETLADLIKRIKANFSLHD--VDDEEKGDQLSEHSEKLALAYAILTLPPGAP--IR 785

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           I KN+R+C   H    Y+SM+   EI L DS   H FKNG CSC  YW
Sbjct: 786 ITKNLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 833



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 160/527 (30%), Positives = 241/527 (45%), Gaps = 93/527 (17%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKL 97
           N A+ +   + T        T+  + +AC + ++  L   +H   + L  E +VFV   +
Sbjct: 108 NTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAV 167

Query: 98  LSVYAKCGCLDDAREVFEDMRERNL---YTWSAMIGAYSRDQRWREVVELFFLM-VQDGL 153
           +S+Y KC  +  AR+VF+++  R +    TW++++  YS        V LF  M V  G+
Sbjct: 168 ISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGI 227

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD      IL  CG  G    G+ +H   ++ G+     V N+++ +Y KCGK+  A +
Sbjct: 228 LPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANK 287

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            FE M  KD V WN+M++GY Q G  ++A  LF KM  E+I+  VVT++ +I  Y Q G 
Sbjct: 288 VFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGF 347

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
              AM++ ++M      P+V                                   VT+ S
Sbjct: 348 GCEAMDVFRQMCGCRCRPNV-----------------------------------VTLMS 372

Query: 334 AISACTDLKALAMGMEIHSLAVKMGF-------TDDVLVGNSLINMYSKCEELEAAERVF 386
            +SAC  + AL  G E H  +VK          TDD+ V N+LI+MY+KC+ LE A  +F
Sbjct: 373 LLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMF 432

Query: 387 DMI--KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD--VPPNVIT----------- 431
           D I  KD+DV +W  MI GY Q G    A +LF +M + D  + PN  T           
Sbjct: 433 DEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARL 492

Query: 432 --------------------------WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
                                      N LI  Y ++G+ D A  +F  M      KRN 
Sbjct: 493 AALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMS-----KRNA 547

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
            SW SL+ GY   G+  +A  VF +M+      + +T L VL AC++
Sbjct: 548 VSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSH 594



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 4/115 (3%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEID---VFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
           +L AC    ++   +++HA++   + ID   +FV   L+ +Y+K G +D A+ VF+ M +
Sbjct: 485 VLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSK 544

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG-DF 173
           RN  +W++++  Y    R  +   +F  M ++ L  D   F  +L AC + G DF
Sbjct: 545 RNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMDF 599


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  356 bits (914), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 212/614 (34%), Positives = 324/614 (52%), Gaps = 52/614 (8%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N LI  Y+ LG  D A  +  ++    +  D+ +W  MISGF Q G   +AL LFK M  
Sbjct: 170 NSLIHFYSSLGDLDSAYLVFSKI----VEKDIVSWNSMISGFVQGGSPEEALQLFKRMKM 225

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
               PN VT+   +SAC     L  G        + G   ++++ N++++MY KC  LE 
Sbjct: 226 ENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLED 285

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
           A R                               LF KM+E D+    ++W  +I GY +
Sbjct: 286 ARR-------------------------------LFDKMEEKDI----VSWTTMIDGYAK 310

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ-SSCFYPNC 500
            G+ D A  +F  M + D       +WN+LI+ YQQ G+   AL +FR++Q +    PN 
Sbjct: 311 VGDYDAARRVFDVMPRED-----ITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNE 365

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           VT+ S L ACA L A +    IH  + ++ ++ +  +  SLID Y+K G++  +  +F  
Sbjct: 366 VTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYS 425

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           +  +D+  W+++I G  +HG   AA+DLF +M+   +KPN  TF +++ A S +G+VD G
Sbjct: 426 VERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEG 485

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
           +  F  +   Y ++P  +HY+ M+D+ GR+G LEEA+E IE MPI P +S+W ALL ACR
Sbjct: 486 RLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACR 545

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           I+GN++LA +A  RL + +  +     L+  IYA  GK +   ++R+  + +      G 
Sbjct: 546 IYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGC 605

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS-----SHSGLCIEEEE-KEE 794
             IEV  +++ F+ G  S   S  +YS L  +   + +       SH    +EEE  KE 
Sbjct: 606 SSIEVNGIIHEFLVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEH 665

Query: 795 ISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCL 854
              +HSEKLA+A+ LI   +    IRIVKN+R+C  CH  AK +S +++ +I L D    
Sbjct: 666 ALNLHSEKLAIAYGLI-RMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRF 724

Query: 855 HHFKNGQCSCGDYW 868
           HHF  G CSC DYW
Sbjct: 725 HHFSGGNCSCMDYW 738



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 200/399 (50%), Gaps = 41/399 (10%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  +++A  + +S+   + +H  +   +   D+F+   L+  Y+  G LD A  VF  +
Sbjct: 133 TFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKI 192

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            E+++ +W++MI  + +     E ++LF  M  +   P+      +L AC    D E G+
Sbjct: 193 VEKDIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGR 252

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
                + + G+     + N++L +YVKCG L  ARR F+ M+EKD V+W +MI GY ++G
Sbjct: 253 WACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVG 312

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
           + D A R+FD M RE+I      +N LI SY                             
Sbjct: 313 DYDAARRVFDVMPREDI----TAWNALISSYQ---------------------------- 340

Query: 298 CMISGFAQNGRTSQALDLFKEMSF-VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
                  QNG+  +AL +F+E+       PN VT+ S ++AC  L A+ +G  IH    K
Sbjct: 341 -------QNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKK 393

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G   +  +  SLI+MYSKC  LE A  VF  ++ +DV+ W++MIAG    G+   A +L
Sbjct: 394 QGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDL 453

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           F KMQE+ V PN +T+  L+     +G  DE    F +M
Sbjct: 454 FSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQM 492



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/337 (23%), Positives = 145/337 (43%), Gaps = 37/337 (10%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVK 94
           G   EA+ +   +  + A+  R T + +L AC     +   R    ++     +I++ + 
Sbjct: 211 GSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILS 270

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             +L +Y KCG L+DAR +F+ M E+++ +W+ MI  Y++   +     +F +M ++ + 
Sbjct: 271 NAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDIT 330

Query: 155 --------------------------------PDDFLFPKILQACGNCGDFEAGKLMHSL 182
                                           P++      L AC   G  + G  +H  
Sbjct: 331 AWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVY 390

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           + K G+     +  S++ +Y KCG L  A   F S++ +D   W++MI+G    G    A
Sbjct: 391 IKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAA 450

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMIS 301
             LF KM   ++K   VTF  L+ + +  G  D       +M  + G+ P    + CM+ 
Sbjct: 451 IDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVD 510

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
              + G   +A++L ++M  V   P+     + + AC
Sbjct: 511 ILGRAGCLEEAVELIEKMPIV---PSASVWGALLGAC 544


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 213/610 (34%), Positives = 337/610 (55%), Gaps = 45/610 (7%)

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNG-----VTITSAISACTDLKALAMGMEIHSL 353
           MISGF +N     ++ +F +M    V+ NG      T+ + + A  +L+ L +GM+I  L
Sbjct: 1   MISGFVKNSCFEDSIRVFGDM----VLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCL 56

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
           A+K GF   V +   LI+++SKC E+E A  +F  I+ KD+ S N+MI+G+   G    +
Sbjct: 57  AIKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDS 116

Query: 414 YELFIKMQESD-----------VP---P-------NVITWNVLISGYIQNGNEDEAVD-- 450
             LF ++  S            +P   P       N I    +  G + + +   A+   
Sbjct: 117 VRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTV 176

Query: 451 -------LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
                  +F R   ++  ++  ASWN++I+G  Q G  + A+ +F+ MQ +   PN VT+
Sbjct: 177 YCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTV 236

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
            S+L ACA + A +  + +H  +     ES++ V  +LID YAK G+I  +R +FD M  
Sbjct: 237 TSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPE 296

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           K+ +TWN++I GY LHG    AL LF  M S  +KP   TFLS++ A S AG+V  G  +
Sbjct: 297 KNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGI 356

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           F ++   +   P+ EHY+ M+D+ GR+G+L++A+EFI+ MP+EP   +W ALL AC IH 
Sbjct: 357 FHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHK 416

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
           + +LA +A E+LF+L+P ++    L+  IY++  K   A  VR++ ++     + G   I
Sbjct: 417 DTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLI 476

Query: 744 EVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGI 798
           E+  + + F +G  S   S  +Y+ L  +   +T     +        +EEEEKE    +
Sbjct: 477 EIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKV 536

Query: 799 HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
           HSEKLA+AF LI S++    IRI+KN+R+C+ CH   K++S +    I + D+   HHFK
Sbjct: 537 HSEKLAIAFGLI-STEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFK 595

Query: 859 NGQCSCGDYW 868
           +G CSCGDYW
Sbjct: 596 DGLCSCGDYW 605



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 185/396 (46%), Gaps = 32/396 (8%)

Query: 128 MIGAYSRDQRWREVVELFFLMV-QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL 186
           MI  + ++  + + + +F  MV  +G   D      +L A     + + G  +  L IK 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 187 GMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF 246
           G      +   +++++ KCG++  AR  F  + +KD ++ N+MISG+   GE +++ RLF
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 247 DKMCREEIKLGVVTFNILIRSYNQLGQ---CD------VAMEMVK-------------RM 284
            ++     ++   T   LI  Y+  G    C+      V + +V              R+
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRL 180

Query: 285 ESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
             +     +F         +W  MISG  QNG T  A+ LF+ M    V PN VT+TS +
Sbjct: 181 NEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSIL 240

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
           SAC  + AL++G  +HSL     F  +V V  +LI+MY+KC  +  A  +FD++ +K+  
Sbjct: 241 SACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEV 300

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           +WN+MI+GY   G+  +A +LF  M  S V P  +T+  ++      G   E   +F  M
Sbjct: 301 TWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTM 360

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
             +   +     +  ++    + GQ   AL   + M
Sbjct: 361 VHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAM 396



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 142/312 (45%), Gaps = 10/312 (3%)

Query: 31  FLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF---LNLVT 87
           F C NG   +++ +   + + G +V  +T + L+         +L   +H F   L +V+
Sbjct: 107 FTC-NGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVS 165

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
              V   T L +VY +   +  AR++F++  E+ L +W+AMI   +++      + LF  
Sbjct: 166 HSSV--STALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQT 223

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M ++ + P+      IL AC   G    G+ +HSL+          V  +++ +Y KCG 
Sbjct: 224 MQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGS 283

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           +  AR  F+ M EK+ V WN+MISGY   G   EA +LF  M    +K   +TF  ++ +
Sbjct: 284 ITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYA 343

Query: 268 YNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            +  G       +   M    G  P    + CM+    + G+  +AL+  K M    V P
Sbjct: 344 CSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMP---VEP 400

Query: 327 NGVTITSAISAC 338
                 + + AC
Sbjct: 401 GPPVWGALLGAC 412



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 154/350 (44%), Gaps = 39/350 (11%)

Query: 46  DSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF----VKTKLLSVY 101
           D +   G +    T I +L A  +   + L  ++   L L  +   +    + T L+S++
Sbjct: 20  DMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQI---LCLAIKCGFYSHVSLLTGLISLF 76

Query: 102 AKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFP 161
           +KCG ++ AR +F ++R+++L + +AMI  ++ +    + V LF  ++  G         
Sbjct: 77  SKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIV 136

Query: 162 KILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK 221
            ++      G       +H   +KLG+     V  ++  VY +  ++I+AR+ F+   EK
Sbjct: 137 GLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEK 196

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA---- 277
              +WN+MISG  Q G  D A  LF  M +  +    VT   ++ +  Q+G   +     
Sbjct: 197 TLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVH 256

Query: 278 ------------------MEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTS 310
                             ++M  +  S+ +  ++F         TW  MISG+  +G   
Sbjct: 257 SLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQ 316

Query: 311 QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGF 359
           +AL LF +M    V P G+T  S + AC+    +  G  I H++    GF
Sbjct: 317 EALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGF 366



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 148/345 (42%), Gaps = 28/345 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           NG  + AI++  ++          T  ++L AC    ++ L   +H+ +     E +V+V
Sbjct: 211 NGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYV 270

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +YAKCG +  ARE+F+ M E+N  TW+AMI  Y      +E ++LF+ M+   +
Sbjct: 271 STALIDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSV 330

Query: 154 FPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            P    F  +L AC + G  + G  + H++V   G   +      ++ +  + G+L  A 
Sbjct: 331 KPTGLTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKAL 390

Query: 213 RFFESMDEKDGVA-WNSMISGYFQIGENDEAHRLFDKMCR---EEIKLGVVTFNI--LIR 266
            F ++M  + G   W +++       + + AH   +K+     E I   V+  NI  + R
Sbjct: 391 EFIKAMPVEPGPPVWGALLGACMIHKDTNLAHVASEKLFELDPENIGYYVLMSNIYSVER 450

Query: 267 SYNQLGQCDVAMEMVKRMESLGIT-------PDVFTWTCMISGFAQNGRTSQALDLFKEM 319
            Y Q        +  +  ++ G T       P VFT        + +    Q+  ++ E+
Sbjct: 451 KYPQAASVRQVAKKKRLAKTPGCTLIEIGQVPHVFT--------SGDQSHPQSKAIYAEL 502

Query: 320 -SFVGVMPNGVTITSAISACTDL----KALAMGMEIHSLAVKMGF 359
               G M      T   +   DL    K L M +    LA+  G 
Sbjct: 503 DKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKVHSEKLAIAFGL 547


>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 657

 Score =  356 bits (913), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 216/656 (32%), Positives = 338/656 (51%), Gaps = 49/656 (7%)

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
           I+    T N L RS  +   C VA+  +      G      +   +I    + G+  QAL
Sbjct: 10  IQPNYYTVNFLPRSPLKPPLCSVALNNLSISSGAGAK---ISNNQLIQSLCKEGKLKQAL 66

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
            +  + S     P+  T    I  C    +L+ G+ +H   +  G   D  +   LI MY
Sbjct: 67  RVLSQES----SPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMY 122

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
           S    ++ A +VFD  + + +Y WN++      AG+  +   L+ KM    V  +  T+ 
Sbjct: 123 SDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYT 182

Query: 434 VLISG---------YIQNGNEDEA-----------------VDLFQRMGKNDKVK----- 462
            ++           ++  G E  A                 VD++ R G  D        
Sbjct: 183 YVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNG 242

Query: 463 ---RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC--FYPNCVTILSVLPACAYLVASN 517
              RN  SW+++IA Y + G+   AL  FR+M +      PN VT++SVL ACA L A  
Sbjct: 243 MPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALE 302

Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
           + + IHG +LRR L+S LPV+++L+  Y + G +   + +FD M  +D+++WNSLI  Y 
Sbjct: 303 QGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYG 362

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
           +HG+   A+ +F++M + G  P   TF+S++ A S  G+V+ GK++F S+   + I P +
Sbjct: 363 VHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQV 422

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
           EHY+ M+DL GR+ +L+EA + ++DM  EP   +W +LL +CRIHGN++LA  A  RLF 
Sbjct: 423 EHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFA 482

Query: 698 LEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGW 757
           LEP +     L+  IYA     ++  +V+KL      +   G+CW+EV+  +Y+FV+   
Sbjct: 483 LEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSMDE 542

Query: 758 SESYSDLLYSWLQNVPENVTAR---SSHSGLC--IEEEEKEEISGIHSEKLALAFALIGS 812
                + ++++L  + E++  +       G+   +E EEKE I   HSEKLALAF LI +
Sbjct: 543 FNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINT 602

Query: 813 SQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S+    IRI KN+R+C  CH   K++S     EI + D    H FKNG CSCGDYW
Sbjct: 603 SKG-EPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 145/276 (52%), Gaps = 8/276 (2%)

Query: 52  GAKVRRNTYINLLQACIDS--NSIHL--ARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGC 106
           G +  R TY  +L+AC+ S   + HL   +++HA L        V++ T L+ +YA+ GC
Sbjct: 173 GVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGC 232

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL--FPDDFLFPKIL 164
           +D A  VF  M  RN+ +WSAMI  Y+++ +  E +  F  M+ +     P+      +L
Sbjct: 233 VDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVL 292

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
           QAC +    E G+L+H  +++ G+  +  V ++++ +Y +CGKL   +R F+ M ++D V
Sbjct: 293 QACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVV 352

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           +WNS+IS Y   G   +A ++F++M         VTF  ++ + +  G  +    + + M
Sbjct: 353 SWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESM 412

Query: 285 -ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
               GI P V  + CM+    +  R  +A  + ++M
Sbjct: 413 WRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDM 448



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 192/419 (45%), Gaps = 53/419 (12%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           LC  G+L +A+ VL    +Q +   + TY  L+  C   +S+    ++H   L+  ++ D
Sbjct: 56  LCKEGKLKQALRVL----SQESSPSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQD 111

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            F+ TKL+ +Y+  G +D AR+VF+  R+R +Y W+A+  A +      EV+ L++ M +
Sbjct: 112 PFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNR 171

Query: 151 DGLFPDDFLFPKILQAC--GNC--GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            G+  D F +  +L+AC    C       GK +H+ + + G +    +  +++ +Y + G
Sbjct: 172 IGVESDRFTYTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFG 231

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE------------- 253
            + +A   F  M  ++ V+W++MI+ Y + G+  EA R F +M  E              
Sbjct: 232 CVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSV 291

Query: 254 --------------------IKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
                               ++ G    +   + L+  Y + G+ DV   +  RM     
Sbjct: 292 LQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDR-- 349

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             DV +W  +IS +  +G   +A+ +F+EM   G  P  VT  S + AC+    +  G  
Sbjct: 350 --DVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407

Query: 350 I-HSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           +  S+    G    V     ++++  +   L EAA+ V DM  +     W S++ G C+
Sbjct: 408 LFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL-GSCR 465



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/397 (23%), Positives = 168/397 (42%), Gaps = 48/397 (12%)

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P    +  ++  CG+      G  +H  ++  G      +   ++ +Y   G + +AR+ 
Sbjct: 75  PSQQTYELLILCCGHRSSLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS------- 267
           F+   ++    WN++       G  +E   L+ KM R  ++    T+  ++++       
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194

Query: 268 --------------------------------YNQLGQCDVAMEMVKRMESLGITPDVFT 295
                                           Y + G  D A  +   M       +V +
Sbjct: 195 ADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMP----VRNVVS 250

Query: 296 WTCMISGFAQNGRTSQALDLFKEM--SFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
           W+ MI+ +A+NG+  +AL  F+EM        PN VT+ S + AC  L AL  G  IH  
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGY 310

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            ++ G    + V ++L+ MY +C +L+  +RVFD + D+DV SWNS+I+ Y   GY  KA
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKA 370

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            ++F +M  +   P  +T+  ++      G  +E   LF+ M ++  +K     +  ++ 
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMV- 429

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               LG+ N      + +Q     P      S+L +C
Sbjct: 430 --DLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSC 464


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  356 bits (913), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 220/653 (33%), Positives = 340/653 (52%), Gaps = 43/653 (6%)

Query: 254 IKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT 309
           IKLG    V T N L+  Y +LG  + A  +   M       D+ TW  M+ G+  NG  
Sbjct: 134 IKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMP----VRDIVTWNTMVDGYVSNGLG 189

Query: 310 SQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
           S AL  F+EM   + V  + V I +A++AC    +   G EIH   ++ G   D+ VG S
Sbjct: 190 SLALACFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQDIKVGTS 249

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           L++MY KC E+  A  VF  +  + V +WN MI GY       +A++ F++M+   +   
Sbjct: 250 LLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVE 309

Query: 429 VITW-NVL--------------ISGYIQNGN-------EDEAVDLFQRMGK---NDKV-- 461
           V+T  N+L              + GY+           E   ++++ ++GK   ++K+  
Sbjct: 310 VVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFG 369

Query: 462 ---KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
               +   SWN++IA Y        A+ +F ++ +   YP+  T+ +V+PA   L +   
Sbjct: 370 KIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRH 429

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
            ++IH  ++      +  +MN+++  YA+SG++V SR IFD M SKD+I+WN++I GY +
Sbjct: 430 CRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAI 489

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           HG    AL++FD+MK  GL+PN  TF+S++ A S++G+VD G   F  + + Y +IP IE
Sbjct: 490 HGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIE 549

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
           HY  M DL GR G L E ++FIE MPI+P S +W +LLTA R   +ID+A  A ER+F L
Sbjct: 550 HYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQL 609

Query: 699 EPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS 758
           E  +     ++  +YA  G+ ED  +VR L +E   R +     +E+ +   +F  G  S
Sbjct: 610 EHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMS 669

Query: 759 ESYSDLLY---SWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQA 815
            S S  ++   + L    E      + S           +   HS +LA+ F LI SS+ 
Sbjct: 670 HSQSRTIHEVSNILSRKIEETDDTRNQSYPVPVATRTTTMPNKHSVRLAVVFGLI-SSEI 728

Query: 816 PHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              I + KN+R+C HCH   K +S      I + DSK  H F +G C CGDYW
Sbjct: 729 GSPILVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 216/484 (44%), Gaps = 71/484 (14%)

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           K+ ++S+ A+ G +D+A E    +R  + +  + MI  ++        +  +  M++DG 
Sbjct: 45  KSLVVSLAAE-GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD F FP +++ C   G  + G+  H +VIKLG+       NS++A Y K G +  A R
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--------------------CRE- 252
            F+ M  +D V WN+M+ GY   G    A   F +M                    C E 
Sbjct: 164 VFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEV 223

Query: 253 ------EIKLGVVTFNI---------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                 EI   V+   +         L+  Y + G+   A  +   M        V TW 
Sbjct: 224 SSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMP----LRTVVTWN 279

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           CMI G+A N R  +A D F +M   G+    VT  + ++AC   ++   G  +H   V+ 
Sbjct: 280 CMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRR 339

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            F   V++  +L+ MY K  ++E++E++F  I +K + SWN+MIA Y       +A  LF
Sbjct: 340 QFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLF 399

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGN----------------------EDEAVDLFQRM 455
           +++    + P+  T + ++  ++  G+                       +  + ++ R 
Sbjct: 400 LELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARS 459

Query: 456 GK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           G         +  V ++  SWN++I GY   GQ   AL +F +M+ +   PN  T +SVL
Sbjct: 460 GDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVL 519

Query: 508 PACA 511
            AC+
Sbjct: 520 TACS 523



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 206/437 (47%), Gaps = 47/437 (10%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDA 110
           GA+  R T+  +++ C     +   R  H   + L  E DV+    L++ YAK G ++DA
Sbjct: 102 GARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDA 161

Query: 111 REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL--FPDDFLFPKILQACG 168
             VF+ M  R++ TW+ M+  Y  +      +  F  M  D L    D       L AC 
Sbjct: 162 ERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEM-HDALEVQHDSVGIIAALAAC- 219

Query: 169 NCGDFEA--GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
            C +  +  GK +H  VI+ G+    +V  S+L +Y KCG++ +AR  F +M  +  V W
Sbjct: 220 -CLEVSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTW 278

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------------- 261
           N MI GY      DEA   F +M  E +++ VVT                          
Sbjct: 279 NCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVR 338

Query: 262 ----------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQ 311
                       L+  Y ++G+ + + ++  ++ +      + +W  MI+ +      ++
Sbjct: 339 RQFLPHVVLETALLEMYGKVGKVESSEKIFGKIAN----KTLVSWNNMIAAYMYKEMYTE 394

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           A+ LF E+    + P+  T+++ + A   L +L    +IHS  + +G+ ++ L+ N++++
Sbjct: 395 AITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLH 454

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MY++  ++ A+  +FD +  KDV SWN+MI GY   G    A E+F +M+ + + PN  T
Sbjct: 455 MYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNEST 514

Query: 432 WNVLISGYIQNGNEDEA 448
           +  +++    +G  DE 
Sbjct: 515 FVSVLTACSVSGLVDEG 531



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 142/294 (48%), Gaps = 8/294 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFV 93
           N R +EA      +  +G +V   T INLL AC  + S    R +H ++     +  V +
Sbjct: 288 NERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVL 347

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           +T LL +Y K G ++ + ++F  +  + L +W+ MI AY   + + E + LF  ++   L
Sbjct: 348 ETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPL 407

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           +PD F    ++ A    G     + +HS +I LG +    + N+VL +Y + G ++ +R 
Sbjct: 408 YPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASRE 467

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M  KD ++WN+MI GY   G+   A  +FD+M    ++    TF  ++ + +  G 
Sbjct: 468 IFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGL 527

Query: 274 CDVA-MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            D   M     ++  G+ P +  + CM     + G      DL + + F+  MP
Sbjct: 528 VDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREG------DLREVLQFIESMP 575



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 113/248 (45%), Gaps = 7/248 (2%)

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
           K     +PP   +   L+      G  DEAV+    +   D    N      +I G+   
Sbjct: 31  KEPPPRLPPKRGSSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNV-----MIRGFADA 85

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           G    AL  +R M      P+  T   V+  CA L   ++ +  HG V++  LE  +   
Sbjct: 86  GLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTC 145

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK-SFGL 597
           NSL+  YAK G +  +  +FDGM  +DI+TWN+++ GYV +G    AL  F +M  +  +
Sbjct: 146 NSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALACFQEMHDALEV 205

Query: 598 KPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
           + +    ++ + A  L      GK++   +   + +   I+  ++++D+Y + G++  A 
Sbjct: 206 QHDSVGIIAALAACCLEVSSMQGKEIHGYVIR-HGLEQDIKVGTSLLDMYCKCGEVAYAR 264

Query: 658 EFIEDMPI 665
                MP+
Sbjct: 265 SVFATMPL 272


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 210/631 (33%), Positives = 337/631 (53%), Gaps = 22/631 (3%)

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
           R+  +  R    LGV     L+R+Y  L     A ++   +       +V     MI  +
Sbjct: 65  RIISEDLRYNSSLGVK----LMRAYASLKDVATARKVFDEIPER----NVIIINVMIRSY 116

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
             NG   + + +F  M    V P+  T    + AC+    + +G +IH  A K+G +  +
Sbjct: 117 VNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTL 176

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
            VGN L++MY KC  L  A  V D +  +DV SWNS++AGY Q      A E+  +M+  
Sbjct: 177 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESV 236

Query: 424 DVPPNVITWNVLISGYIQNGNED--EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK 481
            +  +  T   L+        E+     D+F +MGK     ++  SWN +I  Y +    
Sbjct: 237 KISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGK-----KSLVSWNVMIGVYMKNAMP 291

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
             A+ ++  M++  F P+ V+I SVLPAC    A +  K+IHG + R+ L  +L + N+L
Sbjct: 292 VEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENAL 351

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
           ID YAK G +  +R +F+ M S+D+++W ++I  Y   G    A+ LF +M+  GL P+ 
Sbjct: 352 IDMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDS 411

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
             F++ + A S AG+++ G+  F  +T+ Y+I P +EH + M+DL GR+GK++EA +FI+
Sbjct: 412 IAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQ 471

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPED 721
           +MP+EP+  +W ALL ACR+H N D+ +LA ++LF L P       L+  IYA  G+ E+
Sbjct: 472 EMPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 531

Query: 722 ALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL----QNVPENVT 777
              +R + +    + + G   +EV  +++TF+ G  S   S  +Y  L    + + E   
Sbjct: 532 VTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELGY 591

Query: 778 ARSSHSGLC-IEEEEKEEISGIHSEKLALAFALIGSSQ--APHTIRIVKNIRMCVHCHET 834
              S S L  +EEE+KE    +HSEKLA+ FAL+ + +  + + IRI KN+R+C  CH  
Sbjct: 592 VPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITKNLRICGDCHVA 651

Query: 835 AKYVSMMHHCEIFLADSKCLHHFKNGQCSCG 865
           AK +S +   EI + D+   H F+ G CSC 
Sbjct: 652 AKLISQITSREIIIRDTNRFHVFRFGVCSCA 682



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 210/415 (50%), Gaps = 5/415 (1%)

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
           KL+  YA    +  AR+VF+++ ERN+   + MI +Y  +  +RE +++F  M    + P
Sbjct: 80  KLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKP 139

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D + FP +L+AC   G+   GK +H    K+G+S    V N ++++Y KCG L  AR   
Sbjct: 140 DHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 199

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           + M  +D V+WNS+++GY Q    D+A  +  +M   +I     T   L+ + +     +
Sbjct: 200 DEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 259

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
           V    VK M        + +W  MI  + +N    +A++L+  M   G  P+ V+ITS +
Sbjct: 260 VM--YVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVL 317

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
            AC D  AL++G +IH    +     ++L+ N+LI+MY+KC  L+ A  VF+ +K +DV 
Sbjct: 318 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLDRARDVFENMKSRDVV 377

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           SW +MI+ Y  +G    A  LF KMQ+S + P+ I +   ++     G  +E    F+ M
Sbjct: 378 SWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 437

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             + K+   T     L      LG+       ++ +Q     PN     ++L AC
Sbjct: 438 TDHYKI---TPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGAC 489



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 102/428 (23%), Positives = 183/428 (42%), Gaps = 48/428 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           NG   E I V  ++ +   K    T+  +L+AC  S +I + +K+H     V     +FV
Sbjct: 119 NGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSSTLFV 178

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+S+Y KCG L +AR V ++M  R++ +W++++  Y+++QR+ + +E+   M    +
Sbjct: 179 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREMESVKI 238

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             D      +L A  N    E    +  +  K+G   +    N ++ VY+K    + A  
Sbjct: 239 SHDAGTMASLLPAVSNTTT-ENVMYVKDMFFKMGKKSLVSW-NVMIGVYMKNAMPVEAVE 296

Query: 214 FFESMD----EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            +  M+    E D V+  S++             ++   + R+++   ++  N LI  Y 
Sbjct: 297 LYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYA 356

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           + G  D A ++ + M+S     DV +WT MIS +  +GR   A+ LF +M   G++P+ +
Sbjct: 357 KCGCLDRARDVFENMKSR----DVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSI 412

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
              + ++AC+    L  G     L               + + Y     LE    + D++
Sbjct: 413 AFVTTLAACSHAGLLEEGRSCFKL---------------MTDHYKITPRLEHLACMVDLL 457

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED--- 446
                             G  GK  E +  +QE  + PN   W  L+     + N D   
Sbjct: 458 ------------------GRAGKVKEAYKFIQEMPMEPNERVWGALLGACRVHSNTDIGL 499

Query: 447 -EAVDLFQ 453
             A  LFQ
Sbjct: 500 LAADKLFQ 507



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 148/309 (47%), Gaps = 28/309 (9%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLL 98
           EA+ +   +   G +    +  ++L AC D++++ L +K+H ++     I ++ ++  L+
Sbjct: 293 EAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 352

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +YAKCGCLD AR+VFE+M+ R++ +W+AMI AY    R  + V LF  M   GL PD  
Sbjct: 353 DMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSI 412

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV--KCGKLIWARRFFE 216
            F   L AC + G  E G+    L+         R+ +    V +  + GK+  A +F +
Sbjct: 413 AFVTTLAACSHAGLLEEGRSCFKLMTD-HYKITPRLEHLACMVDLLGRAGKVKEAYKFIQ 471

Query: 217 SMD-EKDGVAWNSMISGYFQIGENDE-----AHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
            M  E +   W +++ G  ++  N +     A +LF ++  E+    V+  NI    Y +
Sbjct: 472 EMPMEPNERVWGALL-GACRVHSNTDIGLLAADKLF-QLAPEQSGYYVLLSNI----YAK 525

Query: 271 LGQCDVAMEMVKRMESLGITPD-----------VFTWTCMISGFAQNGRTSQALD-LFKE 318
            G+ +    +   M+S G+  +           + T+        Q+    + LD L K+
Sbjct: 526 AGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKK 585

Query: 319 MSFVGVMPN 327
           M  +G +P+
Sbjct: 586 MKELGYVPD 594



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 111/524 (21%), Positives = 214/524 (40%), Gaps = 87/524 (16%)

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
           D +  + +HS +I   +     +   ++  Y     +  AR+ F+ + E++ +  N MI 
Sbjct: 55  DLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIR 114

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
            Y   G   E  ++F  MC   +K    TF  ++++ +  G   +  ++      +G++ 
Sbjct: 115 SYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSS 174

Query: 292 -------------------------------DVFTWTCMISGFAQNGRTSQALDLFKEMS 320
                                          DV +W  +++G+AQN R   AL++ +EM 
Sbjct: 175 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDALEVCREME 234

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK-CEEL 379
            V +  +  T+ S + A ++     + M +  +  KMG    ++  N +I +Y K    +
Sbjct: 235 SVKISHDAGTMASLLPAVSNTTTENV-MYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPV 292

Query: 380 EAAERVFDMIKD---KDVYSWNSMIA--GYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           EA E    M  D    D  S  S++   G   A   GK    +I+ ++  + PN++  N 
Sbjct: 293 EAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK--LIPNLLLENA 350

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           LI  Y + G  D A D+F+ M   D V     SW ++I+ Y   G+  +A+ +F KMQ S
Sbjct: 351 LIDMYAKCGCLDRARDVFENMKSRDVV-----SWTAMISAYGFSGRGCDAVALFSKMQDS 405

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              P+ +  ++ L AC++                                   +G +   
Sbjct: 406 GLVPDSIAFVTTLAACSH-----------------------------------AGLLEEG 430

Query: 555 RTIFDGMSSKDIIT--WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
           R+ F  M+    IT     L C   L G      + +  ++   ++PN   + +++ A  
Sbjct: 431 RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACR 490

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMI-DLYGRSGKLEE 655
           +    D+G     +  + +Q+ P    Y  ++ ++Y ++G+ EE
Sbjct: 491 VHSNTDIG---LLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEE 531



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 82/160 (51%), Gaps = 2/160 (1%)

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           ++ +H  ++   L  +  +   L+  YA   ++  +R +FD +  +++I  N +I  YV 
Sbjct: 59  LRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNVIIINVMIRSYVN 118

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           +GF+   + +F  M S  +KP+  TF  ++ A S +G + +GKK+  S T+   +   + 
Sbjct: 119 NGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKV-GLSSTLF 177

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
             + ++ +YG+ G L EA   +++M    D   W +L+  
Sbjct: 178 VGNGLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLVAG 216


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 235/792 (29%), Positives = 377/792 (47%), Gaps = 115/792 (14%)

Query: 155 PDDF---LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           P +F    +   LQ C    +   GK +H  ++K G        N +L +YVK   L  A
Sbjct: 33  PSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDA 92

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI-------- 263
            + F+ M E++ +++ ++I GY +     EA  LF ++ RE  +L    F          
Sbjct: 93  SKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSM 152

Query: 264 ---------------------------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                                      LI +Y+  G+ DVA E+   +    +  D+ +W
Sbjct: 153 DCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGI----LYKDMVSW 208

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           T M++ FA+N    +AL LF +M  VG  PN  T  S   AC  L+A  +G  +H  A+K
Sbjct: 209 TGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALK 268

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
             +  D+ VG +L+++Y+K  +++ A   F+ I  KDV  W+ MIA Y Q+    +A E+
Sbjct: 269 SRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEM 328

Query: 417 FIKMQESDVPPNVITW-----------------------------------NVLISGYIQ 441
           F +M+++ V PN  T+                                   N L+  Y +
Sbjct: 329 FFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAK 388

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G  + ++ LF      + V      WN++I G+ QLG    AL +F  M         V
Sbjct: 389 CGRMENSMXLFAESPHRNDV----TPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEV 444

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           T  S L ACA L A     +IH   ++ + +  + V N+LID YAK G+I  +R +FD M
Sbjct: 445 TYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLM 504

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
           + +D ++WN++I GY +HG                            LA + AG++D G+
Sbjct: 505 NKQDEVSWNAMISGYSMHG----------------------------LACANAGLLDQGQ 536

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
             F S+ + + I P IEHY+ M+ L GR G L++A++ I+++P +P   +W ALL AC I
Sbjct: 537 AYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVI 596

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H +I+L  ++ + + ++EP D     L+  +YA   + ++   VRK  +    +   G  
Sbjct: 597 HNDIELGRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLS 656

Query: 742 WIEVKNLVYTFVTGGWSESYSDL---LYSWLQNVPENVTARSSHSG--LCIEEEEKEEIS 796
           WIE +  V++F  G  S     +   +  WL    +      +++   L +E+EEKE + 
Sbjct: 657 WIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLL 716

Query: 797 GIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHH 856
            +HSE+LAL+F +I +      IRI+KN+R+CV CH   K +S +   EI + D    HH
Sbjct: 717 WVHSERLALSFGIIRTPSGS-PIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHH 775

Query: 857 FKNGQCSCGDYW 868
           F+ G CSCGDYW
Sbjct: 776 FQEGLCSCGDYW 787



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 222/462 (48%), Gaps = 45/462 (9%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKT 95
           R  EAI +   +  +G ++    +  +L+  +  +   L   +HA    L  E + FV T
Sbjct: 119 RFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGT 178

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            L+  Y+ CG +D AREVF+ +  +++ +W+ M+  ++ +  ++E ++LF  M   G  P
Sbjct: 179 ALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKP 238

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           ++F F  + +AC     F+ GK +H   +K        V  ++L +Y K G +  AR  F
Sbjct: 239 NNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAF 298

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           E + +KD + W+ MI+ Y Q  ++ EA  +F +M +  +     TF  ++++   +   +
Sbjct: 299 EEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLN 358

Query: 276 VAMEMVKRMESLGITPDVFT--------------------------------WTCMISGF 303
           +  ++   +  +G+  DVF                                 W  +I G 
Sbjct: 359 LGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGH 418

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
            Q G   +AL LF  M    V    VT +SA+ AC  L AL  G++IHSL VK  F  D+
Sbjct: 419 VQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDI 478

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC---------GKAY 414
           +V N+LI+MY+KC  ++ A  VFD++  +D  SWN+MI+GY   G           G+AY
Sbjct: 479 VVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLACANAGLLDQGQAY 538

Query: 415 ELFIKM-QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
             F  M Q+  + P +  +  ++    + G+ D+AV L   +
Sbjct: 539 --FTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEI 578



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 233/513 (45%), Gaps = 91/513 (17%)

Query: 58  NTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           + Y N LQ CI  +     + LH   L     +D+F    LL++Y K   L DA ++F++
Sbjct: 39  HAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDE 98

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQ--ACGNCGDFE 174
           M ERN  ++  +I  Y+   R+ E +ELF  + ++G   + F+F  IL+     +CG+  
Sbjct: 99  MPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSMDCGELG 158

Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
            G  +H+ + KLG      V  +++  Y  CG++  AR  F+ +  KD V+W  M++ + 
Sbjct: 159 WG--IHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCF- 215

Query: 235 QIGEND---EAHRLFDKMCREEIK-------------LGVVTFNI--------------- 263
              END   EA +LF +M     K             LG+  F++               
Sbjct: 216 --AENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYEL 273

Query: 264 -------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 316
                  L+  Y + G  D A    + +       DV  W+ MI+ +AQ+ ++ +A+++F
Sbjct: 274 DLYVGVALLDLYTKSGDIDDARXAFEEIPK----KDVIPWSFMIARYAQSDQSKEAVEMF 329

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
            +M    V+PN  T  S + AC  ++ L +G +IH   +K+G   DV V N+L+++Y+KC
Sbjct: 330 FQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKC 389

Query: 377 EELEAAERVF-DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--- 432
             +E +  +F +     DV  WN++I G+ Q G   KA  LF+ M E  V    +T+   
Sbjct: 390 GRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSA 449

Query: 433 --------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDK 460
                                           N LI  Y + G+  +A  +F  M K D+
Sbjct: 450 LRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDE 509

Query: 461 VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
           V     SWN++I+GY   G      G+  + Q+
Sbjct: 510 V-----SWNAMISGYSMHGLACANAGLLDQGQA 537



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 219/495 (44%), Gaps = 83/495 (16%)

Query: 303 FAQNGRTSQALDLFKEMSFVG-VMP---NGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           F++ G + Q+  L +E  FVG V P   N     +A+  C      + G  +H   +K G
Sbjct: 11  FSRRGFSVQSAKLTQE--FVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRG 68

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              D+   N L+NMY K + L  A ++FD + +++  S+ ++I GY ++    +A ELF+
Sbjct: 69  GCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFV 128

Query: 419 KMQES--DVPPNVIT---------------WNV------------------LISGYIQNG 443
           ++     ++ P V T               W +                  LI  Y   G
Sbjct: 129 RLHREGHELNPFVFTTILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCG 188

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
             D A ++F  +   D V     SW  ++  + +      AL +F +M+   F PN  T 
Sbjct: 189 RVDVAREVFDGILYKDMV-----SWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTF 243

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
            SV  AC  L A +  K +HGC L+   E  L V  +L+D Y KSG+I  +R  F+ +  
Sbjct: 244 ASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDDARXAFEEIPK 303

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           KD+I W+ +I  Y        A+++F QM+   + PN+ TF S++ A +    ++LG ++
Sbjct: 304 KDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQI 363

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT------ 677
            C + +   +   +   +A++D+Y + G++E +M    + P   D + W  ++       
Sbjct: 364 HCHVIK-IGLHSDVFVSNALMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLG 422

Query: 678 ----ACRIHGNI------------DLAVLAIERLFDLEPG--------------DVLIQR 707
               A R+  N+              A+ A   L  LEPG              D+++  
Sbjct: 423 DGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTN 482

Query: 708 LILQIYAICGKPEDA 722
            ++ +YA CG  +DA
Sbjct: 483 ALIDMYAKCGSIKDA 497



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 145/288 (50%), Gaps = 2/288 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           N    EA+ +   +   G K    T+ ++ +AC+   +  + + +H   L    E+D++V
Sbjct: 218 NDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYV 277

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              LL +Y K G +DDAR  FE++ ++++  WS MI  Y++  + +E VE+FF M Q  +
Sbjct: 278 GVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALV 337

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+ F F  +LQAC        G  +H  VIK+G+     V N+++ VY KCG++  +  
Sbjct: 338 LPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMX 397

Query: 214 FF-ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
            F ES    D   WN++I G+ Q+G+ ++A RLF  M    ++   VT++  +R+   L 
Sbjct: 398 LFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLA 457

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
             +  +++           D+     +I  +A+ G    A  +F  M+
Sbjct: 458 ALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMN 505


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  355 bits (912), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 248/823 (30%), Positives = 395/823 (47%), Gaps = 108/823 (13%)

Query: 70  SNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE--DMRERNLYTWSA 127
           S +I  AR L    + + + D+   T +LS Y+  G +  A ++F    M  R+  +++A
Sbjct: 44  SFNIPYARYL---FDKIPKPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNA 100

Query: 128 MIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKL 186
           MI A+S        ++LF  M + G  PD F F  +L A     D E   + +H  V K 
Sbjct: 101 MITAFSHSHDGHAALQLFVQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKW 160

Query: 187 GMSCVRRVRNSVLAVYVKCGK---------LIWARRFFESMD--EKDGVAWNSMISGYFQ 235
           G   V  V N++++ YV C           +  AR+ F+      +D  AW ++I+GY +
Sbjct: 161 GALSVPSVLNALMSCYVSCASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVR 220

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
             +   A  L + M  + I    V +N +I  Y   G  + A ++++RM SLGI  D +T
Sbjct: 221 NDDLVAARELLEGMT-DHI---AVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYT 276

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           +T +IS  +  G  +    +   +    V P+G  + S                      
Sbjct: 277 YTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFVLS---------------------- 314

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
                    V N+LI +Y++C +L  A RVFD +  KD+ SWN++++G   A    +A  
Sbjct: 315 ---------VNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANS 365

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           +F +M       +++TW V+ISG  QNG  +E + LF +M K + ++    ++   IA  
Sbjct: 366 IFREMPVR----SLLTWTVMISGLAQNGFGEEGLKLFNQM-KLEGLEPCDYAYAGAIASC 420

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
             LG  +N                                    +++H  +++   +SSL
Sbjct: 421 SVLGSLDNG-----------------------------------QQLHSQIIQLGHDSSL 445

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            V N+LI  Y++ G +  + T+F  M   D ++WN++I     HG    A+ L+++M   
Sbjct: 446 SVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHGVQAIQLYEKMLKE 505

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
            + P+R TFL+I+ A S AG+V  G+  F ++  CY I P  +HYS +IDL  R+G   E
Sbjct: 506 DILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSRLIDLLCRAGMFSE 565

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A    E MP EP + IWEALL  C IHGN++L + A +RL +L P        +  +YA 
Sbjct: 566 AKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLELMPQQDGTYISLSNMYAA 625

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN---- 771
            G+ ++  +VRKL RE   +   G  WIEV+N+V+ F+           +Y +L+     
Sbjct: 626 LGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDAVHPEVHAVYRYLEQLVHE 685

Query: 772 ------VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNI 825
                 VP+  T    H    +E E+KE     HSEKLA+ + ++       TIR+ KN+
Sbjct: 686 MRKLGYVPD--TKFVLHD---MESEQKEYALSTHSEKLAVVYGIMKLPLGA-TIRVFKNL 739

Query: 826 RMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           R+C  CH   KY+S +   EI + D K  HHF+NG+CSC +YW
Sbjct: 740 RICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 185/397 (46%), Gaps = 43/397 (10%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVFV 93
           G   EA  +L  + + G ++   TY +++ A  ++   ++ R++HA++   +V     FV
Sbjct: 253 GFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPSGHFV 312

Query: 94  ---KTKLLSVYAKCGCLDDAREVFEDM----------------------------RE--- 119
                 L+++Y +CG L +AR VF+ M                            RE   
Sbjct: 313 LSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFREMPV 372

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           R+L TW+ MI   +++    E ++LF  M  +GL P D+ +   + +C   G  + G+ +
Sbjct: 373 RSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQL 432

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           HS +I+LG      V N+++ +Y +CG +  A   F +M   D V+WN+MI+   Q G  
Sbjct: 433 HSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALAQHGHG 492

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTC 298
            +A +L++KM +E+I    +TF  ++ + +  G           M    GITP+   ++ 
Sbjct: 493 VQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEEDHYSR 552

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK-M 357
           +I    + G  S+A ++ + M F    P      + ++ C     + +G++     ++ M
Sbjct: 553 LIDLLCRAGMFSEAKNVTESMPF---EPGAPIWEALLAGCWIHGNMELGIQAADRLLELM 609

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
              D   +  SL NMY+   + +   RV  +++++ V
Sbjct: 610 PQQDGTYI--SLSNMYAALGQWDEVARVRKLMRERGV 644



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 33/136 (24%)

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD----------- 559
           A L  ++  + +H  +L    +    ++N LID Y KS NI Y+R +FD           
Sbjct: 7   AQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIVAAT 66

Query: 560 ----------------------GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
                                  MS +D +++N++I  +      HAAL LF QMK  G 
Sbjct: 67  TMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGF 126

Query: 598 KPNRGTFLSIILAHSL 613
            P+  TF S++ A SL
Sbjct: 127 VPDPFTFSSVLGALSL 142


>gi|224131508|ref|XP_002328557.1| predicted protein [Populus trichocarpa]
 gi|222838272|gb|EEE76637.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  355 bits (912), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 206/595 (34%), Positives = 324/595 (54%), Gaps = 36/595 (6%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEM---SFVGVMPNGVTITSAISACTDLKALAMG 347
           PDVF    +I G  ++ R   +L  F EM   SF    P+  +    + A  +L+++ +G
Sbjct: 68  PDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSP--PDSFSFAFIVKAAANLRSVRVG 125

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
           +++H  A+  G    + VG +LI+MY +C  +  A +VFD + + +  +WN+M+   C+ 
Sbjct: 126 IQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRG 185

Query: 408 GYCGKAYELFIKMQESDVPP--NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
           G      ELF      D+ P  N+++WNV+++GY + G  + A ++F  M   D V    
Sbjct: 186 GDMKGGRELF------DLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDDV---- 235

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
            SW+++I G+   G    A   FR++Q     PN  ++  VL ACA   A    K +HG 
Sbjct: 236 -SWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGF 294

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG-MSSKDIITWNSLICGYVLHGFWHA 584
           + +  L   + V N+L+DTY+K GN++ ++ +F+  M+ ++I++W S++    +HG    
Sbjct: 295 IEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEE 354

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMI 644
           A+ +F +M+  G++P+   F+S++ A S AG+V+ G + F  +   Y I P IEHY  M+
Sbjct: 355 AIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMV 414

Query: 645 DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVL 704
           DLYGR+G+L++A EF+  MPI   + IW  LL AC +HG++ LA    ERL +L+P +  
Sbjct: 415 DLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSS 474

Query: 705 IQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDL 764
              L+   YA+ GK +DA  VR+   E     + G   IEV  ++YTF+ G      ++ 
Sbjct: 475 DHVLLSNAYAVAGKWKDAASVRRSMTEQRITKTPGWSMIEVDKIMYTFLAGTKQYKITEE 534

Query: 765 LYSWLQN-----------VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSS 813
            Y  L+            VPE    R  H    IEEEEKE    +HSEKLA+AF +    
Sbjct: 535 AYKKLKEIIRRLRVEGGYVPE--IGRVLHD---IEEEEKEGSVSVHSEKLAVAFGIARLC 589

Query: 814 QAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +   TIRIVKN+R+C  CH   K +S ++  EI + D    H FK+G CSC DYW
Sbjct: 590 KG-RTIRIVKNLRICRDCHAVMKLISQIYKVEIVVRDRSRFHSFKDGYCSCRDYW 643



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 218/456 (47%), Gaps = 19/456 (4%)

Query: 61  INLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLS--VYAKCGCLDDAREVFEDM 117
           ++LL  C    S+   +++HA  L L  E D F+  KLL     +    LD A  +F   
Sbjct: 9   LSLLNIC---KSLTTFKQIHANVLKLGLESDPFIAGKLLHHCAISLSDSLDYACRLFRYT 65

Query: 118 RERNLYTWSAMI-GAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
              +++  + +I G Y  D+    +++   +       PD F F  I++A  N      G
Sbjct: 66  PNPDVFMHNTLIRGLYESDRPQDSLLKFIEMRRNSFSPPDSFSFAFIVKAAANLRSVRVG 125

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
             +H   +  G+     V  +++++Y +CG + +AR+ F+ M E + +AWN+M++   + 
Sbjct: 126 IQLHCQALVHGLDTHLFVGTTLISMYGECGFVGFARKVFDEMPEPNAIAWNAMVTACCRG 185

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
           G+      LFD M    +    +++N+++  Y + G+ ++A EM   M       D  +W
Sbjct: 186 GDMKGGRELFDLMPVRNL----MSWNVMLAGYTKAGELELAREMFLEMP----MKDDVSW 237

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           + MI GFA NG   +A   F+E+   G+ PN  ++T  +SAC    AL  G  +H    K
Sbjct: 238 STMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEK 297

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMI-KDKDVYSWNSMIAGYCQAGYCGKAYE 415
            G    V V N+L++ YSKC  +  A+ VF+ I  ++++ SW SM+A     G+  +A  
Sbjct: 298 SGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIG 357

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           +F KM+ES + P+ I +  L+      G  ++  + F +M     ++ +   +  ++  Y
Sbjct: 358 IFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMVDLY 417

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
            + GQ   A     +M   C     +   ++L AC+
Sbjct: 418 GRAGQLQKAYEFVCQMPIPC---TAIIWRTLLGACS 450



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 147/308 (47%), Gaps = 5/308 (1%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           ++ AC     +   R+L    +L+   ++     +L+ Y K G L+ ARE+F +M  ++ 
Sbjct: 178 MVTACCRGGDMKGGREL---FDLMPVRNLMSWNVMLAGYTKAGELELAREMFLEMPMKDD 234

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            +WS MI  ++ +  + E    F  + + G+ P++     +L AC   G  E GK++H  
Sbjct: 235 VSWSTMIVGFAHNGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGF 294

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES-MDEKDGVAWNSMISGYFQIGENDE 241
           + K G++ +  V N++L  Y KCG ++ A+  FE  M+E++ V+W SM++     G  +E
Sbjct: 295 IEKSGLAWIVSVNNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEE 354

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMI 300
           A  +F KM    I+   + F  L+ + +  G  +   E   +M+ +  I P +  + CM+
Sbjct: 355 AIGIFHKMEESGIRPDEIAFISLLYACSHAGLVEQGCEYFDKMKGMYNIEPSIEHYGCMV 414

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
             + + G+  +A +   +M          T+  A S   D+K      E  S       +
Sbjct: 415 DLYGRAGQLQKAYEFVCQMPIPCTAIIWRTLLGACSMHGDVKLAEQVKERLSELDPNNSS 474

Query: 361 DDVLVGNS 368
           D VL+ N+
Sbjct: 475 DHVLLSNA 482



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 2/144 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFV 93
           NG   EA +    +  +G +    +   +L AC  + ++   + LH F+        V V
Sbjct: 247 NGYFEEAFSFFRELQRKGMRPNETSLTGVLSACAQAGALEFGKILHGFIEKSGLAWIVSV 306

Query: 94  KTKLLSVYAKCGCLDDAREVFED-MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              LL  Y+KCG +  A+ VFE  M ERN+ +W++M+ A +      E + +F  M + G
Sbjct: 307 NNALLDTYSKCGNVLMAQLVFERIMNERNIVSWTSMMAALAMHGHGEEAIGIFHKMEESG 366

Query: 153 LFPDDFLFPKILQACGNCGDFEAG 176
           + PD+  F  +L AC + G  E G
Sbjct: 367 IRPDEIAFISLLYACSHAGLVEQG 390


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  355 bits (912), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 219/646 (33%), Positives = 336/646 (52%), Gaps = 69/646 (10%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++  W  M  G A +     AL L+  M  +G++PN  T    + +C  LKA   G++I
Sbjct: 26  PNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQI 85

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM---------------------- 388
           H   +K+G+  D+ V  SLI+MY + E LE A +VFD                       
Sbjct: 86  HGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYI 145

Query: 389 ---------IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-- 437
                    I  KDV SWN+MI+GY + G   +A ELF +M +++V P+  T   +IS  
Sbjct: 146 ESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISAS 205

Query: 438 ---GYIQNGNE-----------------DEAVDLFQRMGKNDKV--------KRNTASWN 469
              G I+ G +                 +  +D + + G+ +           ++  SWN
Sbjct: 206 ARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWN 265

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
            LI GY  L     AL +F++M  S   PN VT+LS+L ACA+L A +  + IH  + +R
Sbjct: 266 ILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKR 325

Query: 530 --SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
              + ++  +  SLID Y+K G+I  +  +F+ M  K +  WN++I G+ +HG  +AA D
Sbjct: 326 LKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFD 385

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           +F +M+   +KP+  TF+ ++ A S AGM+DLG+ +F S+T  Y+I P +EHY  MIDL 
Sbjct: 386 IFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLL 445

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           G SG  +EA E I  M +EPD  IW +LL AC++HGN++L     + LF +EP +     
Sbjct: 446 GHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYV 505

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
           L+  IYA  G+  +  ++R L  +   +   G   IE+ ++V+ F+ G      +  +Y 
Sbjct: 506 LLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 565

Query: 768 WLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
            L+ +            +S     +EEE KE     HSEKLA+AF LI S++    + IV
Sbjct: 566 MLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAIAFGLI-STKPETKLTIV 624

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN+R+C +CHE  K +S ++  EI   D    HHF++G CSC DYW
Sbjct: 625 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 670



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 129/546 (23%), Positives = 241/546 (44%), Gaps = 80/546 (14%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           L  A  VFE ++E NL  W+ M   ++        ++L+  M+  GL P+ + FP +L++
Sbjct: 13  LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C      + G  +H  V+KLG      V  S++++YV+  +L  A + F+    +D V++
Sbjct: 73  CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSY 132

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
            ++++GY   G  + A  +FD++  ++    VV++N +I  Y + G    A+E+ K M  
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKD----VVSWNAMISGYVETGNYKEALELFKEMMK 188

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
             + PD  T   +IS  A++G                                   ++ +
Sbjct: 189 TNVRPDESTMVTVISASARSG-----------------------------------SIEL 213

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G ++HS     GF  ++ + N+LI+ YSKC E+E A  +F  +  KDV SWN +I GY  
Sbjct: 214 GRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTH 273

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED-------------------- 446
                +A  LF +M  S   PN +T   ++      G  D                    
Sbjct: 274 LNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNAS 333

Query: 447 ----EAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
                 +D++ + G         N  + ++  +WN++I G+   G+ N A  +F +M+ +
Sbjct: 334 SLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKN 393

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVY 553
              P+ +T + +L AC++    +  + I   +     +   L     +ID    SG    
Sbjct: 394 EIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKE 453

Query: 554 SRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKS--FGLKPNR-GTFLSIIL 609
           +  +   M+   D + W SL+    +HG     ++L ++     F ++PN  G+++ +  
Sbjct: 454 AEEMISTMTMEPDGVIWCSLLKACKMHG----NVELGEKFAQNLFKIEPNNPGSYVLLSN 509

Query: 610 AHSLAG 615
            ++ AG
Sbjct: 510 IYATAG 515



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 154/357 (43%), Gaps = 35/357 (9%)

Query: 80  HAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
           H   +  +  DV   T L++ YA  G ++ AR +F+++  +++ +W+AMI  Y     ++
Sbjct: 118 HKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYK 177

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E +ELF  M++  + PD+     ++ A    G  E G+ +HS +   G     ++ N+++
Sbjct: 178 EALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALI 237

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
             Y KCG++  A   F  +  KD ++WN +I GY  +    EA  LF +M R       V
Sbjct: 238 DFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDV 297

Query: 260 TFNILIRSYNQLGQCDVA------------------------MEMVKRMESLGITPDVF- 294
           T   ++ +   LG  D+                         ++M  +   +     VF 
Sbjct: 298 TMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFN 357

Query: 295 --------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
                    W  MI GFA +GR + A D+F  M    + P+ +T    +SAC+    L +
Sbjct: 358 SMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDL 417

Query: 347 GMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMI 401
           G  I  S+      T  +     +I++        EA E +  M  + D   W S++
Sbjct: 418 GRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLL 474



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 18/223 (8%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL- 85
           THL+         EA+ +   +   G      T +++L AC    +I + R +H +++  
Sbjct: 272 THLNLY------KEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKR 325

Query: 86  ---VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
              VT     ++T L+ +Y+KCG ++ A +VF  M  ++L  W+AMI  ++   R     
Sbjct: 326 LKGVTNASS-LRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAF 384

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAV 201
           ++F  M ++ + PDD  F  +L AC + G  + G+ +  S+     ++        ++ +
Sbjct: 385 DIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDL 444

Query: 202 YVKCGKLIWARRFFESMD-EKDGVAWNSMIS-----GYFQIGE 238
               G    A     +M  E DGV W S++      G  ++GE
Sbjct: 445 LGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGE 487


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  355 bits (912), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 209/645 (32%), Positives = 342/645 (53%), Gaps = 51/645 (7%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           LI+SY +LG  + A ++  +    G+      W  MI  +++ G   +AL L+  M+  G
Sbjct: 45  LIQSYARLGHIESARQVFDKSPQCGVD----AWNAMIIAYSRRGAMFEALSLYHRMASEG 100

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V P+  T T  + ACT    L  G E    AV  G+ DDV VG +++N+Y+KC +++ A 
Sbjct: 101 VRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAM 160

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES-------------------- 423
           RVFD +  +D+  W +MI G  Q G   +A +++ +M +                     
Sbjct: 161 RVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLG 220

Query: 424 ---------------DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                          D+  +VI    L+  Y +NG+ + A  +F+RM     + +N  SW
Sbjct: 221 HSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRM-----LYKNVISW 275

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           ++LI+G+ Q G   NAL +   MQS  + P+ V+++SVL AC+ +      K +HG ++R
Sbjct: 276 SALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVR 335

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
           R L        ++ID Y+K G++ ++RT+FD +S +D I+WN++I  Y +HG    AL L
Sbjct: 336 R-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSL 394

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F QM+   +KP+  TF S++ A S +G+V+ G+  F  +   Y+I P  +HY+ M+DL  
Sbjct: 395 FLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLS 454

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+G++EEA E IE M  EP  +IW ALL+ C  HG   +  +A +++ +L P D  I  L
Sbjct: 455 RAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSL 514

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +   +A   + ++  +VRK+ ++   +   G   +EV   ++ F+    S    + +   
Sbjct: 515 VSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQV 574

Query: 769 LQNVPENVTA-----RSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
           L  +   + A     ++      +EEE KE +   HSE+LA+AF L+ +      + I K
Sbjct: 575 LGKLDYEMKAMGYVPKTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLL-ITK 633

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+R+C  CHE  K++S + + EI + D K  HHFK+G CSCGDYW
Sbjct: 634 NLRVCGDCHEATKFISKIVNREIVVRDVKRFHHFKDGVCSCGDYW 678



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 214/451 (47%), Gaps = 43/451 (9%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
            KL+  YA+ G ++ AR+VF+   +  +  W+AMI AYSR     E + L+  M  +G+ 
Sbjct: 43  AKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVR 102

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD   +  +L+AC    D  +G+      +  G      V  +VL +Y KCGK+  A R 
Sbjct: 103 PDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDEAMRV 162

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK-------------------------- 248
           F+ M  +D V W +MI+G  Q G+  EA  ++ +                          
Sbjct: 163 FDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHS 222

Query: 249 ---------MCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                    M R++I + V+    L+  Y + G  ++A  + +RM    +  +V +W+ +
Sbjct: 223 KMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRM----LYKNVISWSAL 278

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           ISGFAQNG    AL L  +M   G  P+ V++ S + AC+ +  L +G  +H   V+   
Sbjct: 279 ISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRR-L 337

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             D +   ++I+MYSKC  L  A  VFD I  +D  SWN++IA Y   G   +A  LF++
Sbjct: 338 HFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQ 397

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M+E++V P+  T+  L+S +  +G  ++    F  M    K++ +   +  ++    + G
Sbjct: 398 MRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAG 457

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +   A  +   M +    P     +++L  C
Sbjct: 458 RVEEAQELIESMITE---PGIAIWVALLSGC 485



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 178/376 (47%), Gaps = 43/376 (11%)

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           +IH+L +  G          LI  Y++   +E+A +VFD      V +WN+MI  Y + G
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISG------------------------------ 438
              +A  L+ +M    V P+  T+ V++                                
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144

Query: 439 -----YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
                Y + G  DEA+ +F +MG+ D V      W ++I G  Q GQ   A+ ++R+M  
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLV-----CWTTMITGLAQNGQAREAVDIYRQMHK 199

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
                + V +L ++ AC  L  S     IHG ++R+ +   + V  SL+D YAK+G++  
Sbjct: 200 KRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLEL 259

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           +  +F  M  K++I+W++LI G+  +GF   AL L   M+SFG KP+  + +S++LA S 
Sbjct: 260 ASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQ 319

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
            G + LGK V   I        +    +A+ID+Y + G L  A    + +    DS  W 
Sbjct: 320 VGFLKLGKSVHGYIVRRLHFDCVSS--TAVIDMYSKCGSLSFARTVFDQISFR-DSISWN 376

Query: 674 ALLTACRIHGNIDLAV 689
           A++ +  IHG+ + A+
Sbjct: 377 AIIASYGIHGSGEEAL 392



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/468 (24%), Positives = 217/468 (46%), Gaps = 70/468 (14%)

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H+L+I  G+         ++  Y + G +  AR+ F+   +    AWN+MI  Y + G 
Sbjct: 26  IHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGA 85

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRS------------------------------- 267
             EA  L+ +M  E ++    T+ +++++                               
Sbjct: 86  MFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAA 145

Query: 268 ----YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
               Y + G+ D AM +  +M       D+  WT MI+G AQNG+  +A+D++++M    
Sbjct: 146 VLNLYAKCGKMDEAMRVFDKMGR----RDLVCWTTMITGLAQNGQAREAVDIYRQMHKKR 201

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V  +GV +   I ACT L    MG+ IH   ++     DV+V  SL++MY+K   LE A 
Sbjct: 202 VEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELAS 261

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-NVLIS----G 438
            VF  +  K+V SW+++I+G+ Q G+ G A +L + MQ     P+ ++  +VL++    G
Sbjct: 262 CVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVG 321

Query: 439 YIQNG----------------NEDEAVDLFQRMGK-------NDKVK-RNTASWNSLIAG 474
           +++ G                +    +D++ + G         D++  R++ SWN++IA 
Sbjct: 322 FLKLGKSVHGYIVRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIAS 381

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLES 533
           Y   G    AL +F +M+ +   P+  T  S+L A ++     K +     ++    ++ 
Sbjct: 382 YGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQP 441

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGM-SSKDIITWNSLICGYVLHG 580
           S      ++D  +++G +  ++ + + M +   I  W +L+ G + HG
Sbjct: 442 SEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHG 489



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/405 (24%), Positives = 189/405 (46%), Gaps = 41/405 (10%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTE---IDVF 92
           G + EA+++   +A++G +   +TY  +L+AC  + S+ L      +   V +    DVF
Sbjct: 84  GAMFEALSLYHRMASEGVRPDSSTYTVVLKAC--TRSLDLRSGEETWRQAVDQGYGDDVF 141

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V   +L++YAKCG +D+A  VF+ M  R+L  W+ MI   +++ + RE V+++  M +  
Sbjct: 142 VGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKR 201

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           +  D  +   ++QAC   G  + G  +H  +I+  +     V+ S++ +Y K G L  A 
Sbjct: 202 VEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELAS 261

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
             F  M  K+ ++W+++ISG+ Q G    A +L   M     K   V+   ++ + +Q+G
Sbjct: 262 CVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVG 321

Query: 273 ---------------------QCDVAMEMVKRMESLGITPDVF---------TWTCMISG 302
                                     ++M  +  SL     VF         +W  +I+ 
Sbjct: 322 FLKLGKSVHGYIVRRLHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIAS 381

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV---KMGF 359
           +  +G   +AL LF +M    V P+  T  S +SA +    +  G    S+ V   K+  
Sbjct: 382 YGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQP 441

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAG 403
           ++       ++++ S+   +E A+ + + MI +  +  W ++++G
Sbjct: 442 SEKHYA--CMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSG 484



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 7/211 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           NG    A+ ++  + + G K    + +++L AC     + L + +H ++      D    
Sbjct: 285 NGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFDCVSS 344

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T ++ +Y+KCG L  AR VF+ +  R+  +W+A+I +Y       E + LF  M +  + 
Sbjct: 345 TAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVK 404

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVI-KLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           PD   F  +L A  + G  E G+   S+++ +  +    +    ++ +  + G++  A+ 
Sbjct: 405 PDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQE 464

Query: 214 FFESMDEKDGVA-WNSMIS-----GYFQIGE 238
             ESM  + G+A W +++S     G F IGE
Sbjct: 465 LIESMITEPGIAIWVALLSGCLNHGKFLIGE 495


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 970

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 263/924 (28%), Positives = 431/924 (46%), Gaps = 123/924 (13%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQAC--IDSNSIHLARKLHAFL-NLVTEIDV 91
           NG   EA+  L  +  +G       +++ L+AC  +DS  I   R++H  L  L   +D 
Sbjct: 80  NGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQIHGLLFKLSYAVDA 139

Query: 92  FVKTKLLSVYAKCG-CLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            V   L+S+Y KCG  L  A   F+D++ +N  +W+++I  YS+    R   ++F+ M  
Sbjct: 140 VVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQTGDQRFAFKMFYSMQC 199

Query: 151 DGLFPDDFLFPKILQ-ACG-NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           DG  P ++ F  ++  AC     D    + +   + K G      V + +++ + K G L
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKSGSL 259

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------- 249
           I AR+ F  M+ ++ V  N ++ G  +    +EA +LF  M                   
Sbjct: 260 IHARKIFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFP 319

Query: 250 ---CREEIKL-------------GVVTF-----NILIRSYNQLGQCDVAMEMVKRMESLG 288
                EE+ L             G+V F     N L+  Y + G    A    +R+    
Sbjct: 320 EYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADA----RRVFCFM 375

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
              D  +W  MI+G  QN    +A++ ++ M    ++P   T+ S+IS+C  LK   +G 
Sbjct: 376 TEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKLGQ 435

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           +IH  ++K+G   +V V N+L+ +Y++   L    ++F  + + D  SWNS+I     + 
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGCLNECRKIFSSMPEHDQVSWNSIIGALASSE 495

Query: 409 YC-GKAYELFIKMQESDVPPNVITW----------------------------------- 432
               +A   F+    +    N IT+                                   
Sbjct: 496 RSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTE 555

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           N LI+ Y + G  D    +F RM +    +R+  +WNS+I+GY        AL +   M 
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMSE----RRDDVTWNSMISGYIHNELLAKALDLVWFMM 611

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
            +    +     +VL A A +    +  E+H C +R  LES + V ++L+D Y+K G + 
Sbjct: 612 QTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLD 671

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG-LKPNRGTFLSIILAH 611
           Y+   F+ M                          LF  MK  G   P+  TF+ ++ A 
Sbjct: 672 YALRFFNTMP-------------------------LFANMKLDGQTPPDHVTFVGVLSAC 706

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
           S AG+++ G K F S+++ Y + P IEH+S M DL GR+G+L++  +FIE MP++P+  I
Sbjct: 707 SHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMKPNVLI 766

Query: 672 WEALLTA-CRIHG-NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLE 729
           W  +L A CR +G   +L   A E LF LEP + +   L+  +YA  G+ ED +K RK  
Sbjct: 767 WRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKM 826

Query: 730 RENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--TARSSHSGLC- 786
           ++   +   G  W+ +K+ V+ FV G  S   +D++Y  L+ +   +        +G   
Sbjct: 827 KDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFAL 886

Query: 787 --IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
             +E+E KEEI   HSEKLA+AF L     +   IRI+KN+R+C  CH   K++S +   
Sbjct: 887 YDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKHISKIEGR 946

Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
           +I L DS   HHF++G+CSC D+W
Sbjct: 947 QIILRDSNRFHHFQDGECSCSDFW 970


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 211/647 (32%), Positives = 331/647 (51%), Gaps = 51/647 (7%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N LI  Y +  + + A+ +   M       D+ +W  +I G A NG   +A++LF  M  
Sbjct: 23  NALISFYAKSNRIEDALMVFDEMPQ----RDIISWNSIIGGCASNGLYDKAVELFVRMWL 78

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
            G   +  T+ S + AC       +G  +H  +V+ G   +  +GN+L++MYS C +  +
Sbjct: 79  EGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRS 138

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT---------- 431
             ++F  ++ K+V SW +MI  Y +AG+  K   LF +M    + P+V            
Sbjct: 139 TNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAG 198

Query: 432 -------------------------WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                     N L+  Y++ G  +EA  +F  + K D     T 
Sbjct: 199 NESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKD-----TI 253

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           SWN+LI GY +    N A  +F +M      PN VT+  +LPA A L +  + +E+H   
Sbjct: 254 SWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAYA 312

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           +RR       V N+L+D Y K G ++ +R +FD +++K++I+W  +I GY +HG    A+
Sbjct: 313 VRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAI 372

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
            LF+QMK  G++P+ G+F +I+ A S +G+ D G + F ++   ++I P ++HY+ M+DL
Sbjct: 373 ALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDL 432

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
              +G L+EA EFIE MPIEPDSSIW +LL  CRIH N+ LA    E +F+LEP +    
Sbjct: 433 LCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYY 492

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
            L+  IYA   + E   K++        R + G  WIEV+   + F     +      + 
Sbjct: 493 VLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFFAENRNHPQGMRIA 552

Query: 767 SWLQNVP-----ENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRI 821
            +L +V      E    +  ++ +  ++   +E    HS KLA+AF ++  SQ    IR+
Sbjct: 553 EFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLNLSQG-RPIRV 611

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            KN R+C HCHE AK++S M   EI L DS   HHF+ G+CSC  YW
Sbjct: 612 TKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCRGYW 658



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 208/445 (46%), Gaps = 35/445 (7%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+S YAK   ++DA  VF++M +R++ +W+++IG  + +  + + VELF  M  +G   D
Sbjct: 25  LISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQELD 84

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
                 ++ AC        G ++H   ++ G+     + N++L +Y  C       + F 
Sbjct: 85  STTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFR 144

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY-------- 268
           +M++K+ V+W +MI+ Y + G  D+   LF +M  E I+  V      + ++        
Sbjct: 145 NMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKH 204

Query: 269 --------------NQLGQCDVAMEMVKR---MESLGI------TPDVFTWTCMISGFAQ 305
                           L   +  MEM  +   ME            D  +W  +I G+++
Sbjct: 205 GKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSR 264

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
           +   ++A  LF EM  + + PN VT+   + A   L +L  G E+H+ AV+ G+ +D  V
Sbjct: 265 SNLANEAFTLFNEM-LLQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFV 323

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
            N+L++MY KC  L  A R+FDM+ +K++ SW  MIAGY   G    A  LF +M+ S +
Sbjct: 324 ANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGI 383

Query: 426 PPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL 485
            P+  +++ ++     +G  DE    F  M    +++     +  ++     L    N  
Sbjct: 384 QPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMV---DLLCHTGNLK 440

Query: 486 GVFRKMQSSCFYPNCVTILSVLPAC 510
             +  +++    P+    +S+L  C
Sbjct: 441 EAYEFIETMPIEPDSSIWVSLLRGC 465



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 203/471 (43%), Gaps = 72/471 (15%)

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G ++H  ++K G      V N++++ Y K  ++  A   F+ M ++D ++WNS+I G   
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTF---------------------------------- 261
            G  D+A  LF +M  E  +L   T                                   
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122

Query: 262 -NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
            N L+  Y+         ++ + ME      +V +WT MI+ + + G   +   LF+EM 
Sbjct: 123 GNALLDMYSNCSDWRSTNKIFRNMEQ----KNVVSWTAMITSYTRAGHFDKVAGLFQEMG 178

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
             G+ P+   ITSA+ A    ++L  G  +H  A++ G  + + V N+L+ MY KC  +E
Sbjct: 179 LEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYME 238

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS--- 437
            A  +FD +  KD  SWN++I GY ++    +A+ LF +M    + PN +T   ++    
Sbjct: 239 EARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAA 297

Query: 438 ------------------GYIQ-NGNEDEAVDLFQRMGKNDKVKR--------NTASWNS 470
                             GY++ N   +  VD++ + G     +R        N  SW  
Sbjct: 298 SLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTI 357

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL-RR 529
           +IAGY   G+  +A+ +F +M+ S   P+  +  ++L AC++    ++       +    
Sbjct: 358 MIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEH 417

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
            +E  L     ++D    +GN+  +    + M    D   W SL+ G  +H
Sbjct: 418 RIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIH 468



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 182/402 (45%), Gaps = 68/402 (16%)

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G+ +H   VK GF     V N+LI+ Y+K   +E A  VFD +  +D+ SWNS+I G   
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 407 AGYCGKAYELFIKM----QESD-------VPPNVITWNVLISGYIQN------------- 442
            G   KA ELF++M    QE D       +P  V +    I G +               
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122

Query: 443 GNEDEAVDLFQRMG---KNDKV-----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           GN    +D++         +K+     ++N  SW ++I  Y + G  +   G+F++M   
Sbjct: 123 GN--ALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              P+   I S L A A   +    K +HG  +R  +E  LPV N+L++ Y K G +  +
Sbjct: 181 GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEA 240

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           R IFD ++ KD I+WN+LI GY      + A  LF++M    L+PN  T   I+ A +  
Sbjct: 241 RFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAASL 299

Query: 615 GMVDLGKKVFC---------------SITECY----------QIIPMIEH-----YSAMI 644
             ++ G+++                 ++ + Y          ++  M+ +     ++ MI
Sbjct: 300 SSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMI 359

Query: 645 DLYGRSGKLEEAMEFIEDMP---IEPDSSIWEALLTACRIHG 683
             YG  G+  +A+   E M    I+PD+  + A+L AC   G
Sbjct: 360 AGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSG 401



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 165/339 (48%), Gaps = 37/339 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF---LNLVTEIDV 91
           NG  ++A+ +   +  +G ++   T ++++ AC+ S+   +   +H +     L++E  +
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSL 122

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
                LL +Y+ C       ++F +M ++N+ +W+AMI +Y+R   + +V  LF  M  +
Sbjct: 123 --GNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+ PD F     L A       + GK +H   I+ G+  V  V N+++ +YVKCG +  A
Sbjct: 181 GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEA 240

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R  F+ + +KD ++WN++I GY +    +EA  LF++M   +++   VT   ++ +   L
Sbjct: 241 RFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLL-QLRPNAVTMACILPAAASL 299

Query: 272 GQCDVAMEM-------------------------------VKRMESLGITPDVFTWTCMI 300
              +   EM                                +R+  +    ++ +WT MI
Sbjct: 300 SSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMI 359

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           +G+  +GR   A+ LF++M   G+ P+  + ++ + AC+
Sbjct: 360 AGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACS 398



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 167/362 (46%), Gaps = 9/362 (2%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVFV 93
           G  ++   +   +  +G +       + L A   + S+   + +H +   N + E+ + V
Sbjct: 165 GHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEV-LPV 223

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y KCG +++AR +F+ + +++  +W+ +IG YSR     E   LF  M+   L
Sbjct: 224 ANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-L 282

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+      IL A  +    E G+ MH+  ++ G      V N+++ +YVKCG L+ ARR
Sbjct: 283 RPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARR 342

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ +  K+ ++W  MI+GY   G   +A  LF++M    I+    +F+ ++ + +  G 
Sbjct: 343 LFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGL 402

Query: 274 CDVAMEMVKRMESLG-ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            D        M +   I P +  + CM+      G   +A +  + M    + P+     
Sbjct: 403 RDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMP---IEPDSSIWV 459

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           S +  C   + + +  ++  +  ++   ++      L N+Y++ E  EA  ++ + +  +
Sbjct: 460 SLLRGCRIHRNVKLAEKVAEMVFELE-PENTGYYVLLANIYAEAERWEAVRKLKNKVGGR 518

Query: 393 DV 394
            +
Sbjct: 519 GL 520


>gi|358347383|ref|XP_003637737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503672|gb|AES84875.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 561

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 200/564 (35%), Positives = 314/564 (55%), Gaps = 13/564 (2%)

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
           L  F+ +  +G  P+  ++TSA+ A  +L    +G EIH   ++     DV V  SL++M
Sbjct: 3   LTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDM 62

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y K + LE A+ V    K+K+V +WNS+I+GY   G  G+A +L  +M E  + P+++TW
Sbjct: 63  YVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTW 122

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           N L+SGY   G  DEA+ +  R+ K+  +  N  SW +LI+G  Q  +  +AL +F +MQ
Sbjct: 123 NGLVSGYSMQGRIDEALTIINRI-KSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQ 181

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
           +    PN  TI S+L ACA      K +E+H   ++      + V  +LID Y+++G + 
Sbjct: 182 AENVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAGKLK 241

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            +  +F+ +  K +  WN ++ GY +H      + L+D+M+   ++P+  TF +++ A  
Sbjct: 242 VAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFTALLSACK 301

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
            +G+VD G K F S+ E Y I+P IEHY  M+DL G+SG L+EA  FIE MPI+PD+SIW
Sbjct: 302 NSGLVDEGWKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDEASHFIETMPIKPDASIW 361

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
            ALL +C+IH NI LA +A  +LF +EP +     L++ +Y+   +    + V +L+   
Sbjct: 362 GALLASCKIHKNIKLAEIAARKLFKMEPNNSANYVLMMNLYSSLNR---WVAVERLKHSM 418

Query: 733 T---RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGL-C-- 786
           T    +      W +V   ++ F T G        +Y  L  +   +        L C  
Sbjct: 419 TVLAMKIPPVWSWTQVNQSIHVFSTEGRPHPEEGEIYFELYQLISEIRKLGYAPDLNCVC 478

Query: 787 --IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
             I++ EKE+I   H+EKLA+ + ++   +    IRIVKN R+C  CH  AKY+S++   
Sbjct: 479 QNIDDNEKEKILMSHTEKLAMVYGVM-KMKGGSPIRIVKNTRICFDCHTVAKYISLVRKR 537

Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
           EI L D    HHFKNG+C+C D W
Sbjct: 538 EILLRDGGRFHHFKNGKCACNDRW 561



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/307 (35%), Positives = 169/307 (55%)

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G  PD       LQA    G F+ GK +H  +++  ++    V  S++ +YVK   L  A
Sbjct: 13  GFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDMYVKNDCLEKA 72

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           +        K+  AWNS+ISGY   G+  EA +L ++M  E I   +VT+N L+  Y+  
Sbjct: 73  QAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQ 132

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           G+ D A+ ++ R++S GITP+V +WT +ISG +QN +   AL +F +M    V PN  TI
Sbjct: 133 GRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTI 192

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
            S + AC     L  G E+H  ++K+GF DD+ V  +LI+MYS+  +L+ A  VF+ I++
Sbjct: 193 CSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQE 252

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
           K +  WN M+ GY    +  +   L+ KM+E  + P+ IT+  L+S    +G  DE    
Sbjct: 253 KTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFTALLSACKNSGLVDEGWKY 312

Query: 452 FQRMGKN 458
           F  M ++
Sbjct: 313 FDSMQED 319



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 141/321 (43%), Gaps = 14/321 (4%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRER----NLYTWSAMIGAYSRDQRWREVVELF 145
           D+     L+S Y+  G +D+A  +   ++      N+ +W+A+I   S+++++ + +++F
Sbjct: 118 DLVTWNGLVSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIF 177

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M  + + P+      +L AC      + G+ +H   +KLG      V  +++ +Y + 
Sbjct: 178 SQMQAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEA 237

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           GKL  A   F  + EK    WN M+ GY      +E   L+DKM    I+   +TF  L+
Sbjct: 238 GKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFTALL 297

Query: 266 RSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
            +    G  D   +    M E   I P +  + CM+    ++G   +A    + M    +
Sbjct: 298 SACKNSGLVDEGWKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDEASHFIETMP---I 354

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD---VLVGN--SLINMYSKCEEL 379
            P+     + +++C   K + +         KM   +    VL+ N  S +N +   E L
Sbjct: 355 KPDASIWGALLASCKIHKNIKLAEIAARKLFKMEPNNSANYVLMMNLYSSLNRWVAVERL 414

Query: 380 EAAERVFDMIKDKDVYSWNSM 400
           + +  V  M K   V+SW  +
Sbjct: 415 KHSMTVLAM-KIPPVWSWTQV 434



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/337 (21%), Positives = 143/337 (42%), Gaps = 75/337 (22%)

Query: 42  ITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLL 98
           +T   S+ + G K    +  + LQA I+     L +++H ++   NL    DV+V T L+
Sbjct: 3   LTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNL--NYDVYVCTSLV 60

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +Y K  CL+ A+ V    + +N+  W+++I  YS   ++ E V+L   MV++G+ PD  
Sbjct: 61  DMYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLV 120

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
            +  ++      G    G++  +L I      + R+++S +   V               
Sbjct: 121 TWNGLVS-----GYSMQGRIDEALTI------INRIKSSGITPNV--------------- 154

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------------- 261
                V+W ++ISG  Q  +  +A ++F +M  E +K    T                  
Sbjct: 155 -----VSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGE 209

Query: 262 ------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
                               LI  Y++ G+  VA  +  +++   +      W CM+ G+
Sbjct: 210 ELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLP----CWNCMMMGY 265

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
           A +    + + L+ +M    + P+ +T T+ +SAC +
Sbjct: 266 AIHSHGEEVMILYDKMRERHIRPDAITFTALLSACKN 302



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 131/285 (45%), Gaps = 16/285 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N +  +A+ +   +  +  K    T  +LL AC   + +    +LH F + L    D++V
Sbjct: 167 NEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYV 226

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +Y++ G L  A  VF  ++E+ L  W+ M+  Y+      EV+ L+  M +  +
Sbjct: 227 ATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHI 286

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  +L AC N G  + G K   S+     +         ++ +  K G L  A 
Sbjct: 287 RPDAITFTALLSACKNSGLVDEGWKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDEAS 346

Query: 213 RFFESMDEK-DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL---GVVTFNILIRSY 268
            F E+M  K D   W ++++   +I +N    +L +   R+  K+       + +++  Y
Sbjct: 347 HFIETMPIKPDASIWGALLAS-CKIHKNI---KLAEIAARKLFKMEPNNSANYVLMMNLY 402

Query: 269 NQLGQCDVAMEMVKR-MESLGIT-PDVFTWTCM---ISGFAQNGR 308
           + L +  VA+E +K  M  L +  P V++WT +   I  F+  GR
Sbjct: 403 SSLNRW-VAVERLKHSMTVLAMKIPPVWSWTQVNQSIHVFSTEGR 446


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 211/644 (32%), Positives = 335/644 (52%), Gaps = 67/644 (10%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P +F W  MI G+++       + ++  M    + P+  T    +   T   AL  G  +
Sbjct: 70  PTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVL 129

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
            + AVK GF  ++ V  + I+M+S C  ++ A +VFDM    +V +WN M++GY +    
Sbjct: 130 LNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQF 189

Query: 411 GKAYELFIKMQESDVPPNVITW-----------------------------------NVL 435
            K+  LFI+M++  V PN +T                                    NVL
Sbjct: 190 KKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVL 249

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKV--------------------------KRNTASWN 469
           I  +   G  DEA  +F  M   D +                          +R+  SW 
Sbjct: 250 IDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWT 309

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           ++I GY ++ +   AL +FR+MQ S   P+  T++S+L ACA+L A    + +   + + 
Sbjct: 310 AMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKN 369

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
           S+++   V N+LID Y K GN+  ++ +F  M  KD  TW ++I G  ++G    AL +F
Sbjct: 370 SIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMF 429

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
             M    + P+  T++ ++ A + AGMV+ G+  F S+T  + I P + HY  M+DL GR
Sbjct: 430 SNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGR 489

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +G+LEEA E I +MP++P+S +W +LL ACR+H N+ LA +A +++ +LEP +  +  L+
Sbjct: 490 AGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLL 549

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             IYA C + E+  +VRKL  E   + + G   +E+   VY FV G  S   S  +Y+ L
Sbjct: 550 CNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQSKEIYAKL 609

Query: 770 QNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
           +N+ +++     +  +S   L + EE+KE     HSEKLA+A+ALI S     TIRIVKN
Sbjct: 610 ENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPGI-TIRIVKN 668

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +RMCV CH  AK VS  ++ E+ + D    HHF++G CSC ++W
Sbjct: 669 LRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNFW 712



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/515 (23%), Positives = 224/515 (43%), Gaps = 71/515 (13%)

Query: 61  INLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSV--YAKCGCLDDAREVFEDM 117
           I+LL+ C    S++  +++H+  + +    D   + ++++     + G +  AR+VF+ +
Sbjct: 11  ISLLEKC---KSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAI 67

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            +  L+ W+ MI  YSR    +  V ++ LM+   + PD F FP +L+        + GK
Sbjct: 68  PQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGK 127

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
           ++ +  +K G      V+ + + ++  C  +  AR+ F+  D  + V WN M+SGY ++ 
Sbjct: 128 VLLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVK 187

Query: 238 ENDEAHRLFDKMCREEIKLGVVTF-----------------------------------N 262
           +  ++  LF +M +  +    VT                                    N
Sbjct: 188 QFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILEN 247

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITP---------------------------DVFT 295
           +LI  +   G+ D A  +   M++  +                             D  +
Sbjct: 248 VLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVS 307

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           WT MI G+ +  R  +AL LF+EM    V P+  T+ S ++AC  L AL +G  + +   
Sbjct: 308 WTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYID 367

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K    +D  VGN+LI+MY KC  +  A++VF  +  KD ++W +MI G    G+  +A  
Sbjct: 368 KNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALA 427

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           +F  M E+ + P+ IT+  ++      G  ++    F  M     +K N   +  ++   
Sbjct: 428 MFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLL 487

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            + G+   A  V   M      PN +   S+L AC
Sbjct: 488 GRAGRLEEAHEVIVNMPVK---PNSIVWGSLLGAC 519



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 182/409 (44%), Gaps = 18/409 (4%)

Query: 55  VRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVF 114
           +  N  I++  AC + +      +  +  + +   DV   T +++ +A  G +D AR+ F
Sbjct: 244 ILENVLIDMFAACGEMD------EAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYF 297

Query: 115 EDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE 174
           + + ER+  +W+AMI  Y R  R+ E + LF  M    + PD+F    IL AC + G  E
Sbjct: 298 DQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALE 357

Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
            G+ + + + K  +     V N+++ +Y KCG +  A++ F+ M  KD   W +MI G  
Sbjct: 358 LGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLA 417

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDV 293
             G  +EA  +F  M    I    +T+  ++ +    G  +        M    GI P+V
Sbjct: 418 INGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNV 477

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
             + CM+    + GR  +A ++   M    V PN +   S + AC   K + +  E+ + 
Sbjct: 478 THYGCMVDLLGRAGRLEEAHEVIVNMP---VKPNSIVWGSLLGACRVHKNVQLA-EMAAK 533

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            +     ++  V   L N+Y+ C+  E   +V  ++ ++ +        G       G  
Sbjct: 534 QILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGI----KKTPGCSLMELNGNV 589

Query: 414 YELFIKMQESDVPPNVITWNV--LISGYIQNGNEDEAVDLFQRMGKNDK 460
           YE F+   +S      I   +  ++   I+ G   +  ++F  +G+ DK
Sbjct: 590 YE-FVAGDQSHPQSKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDK 637



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/428 (23%), Positives = 189/428 (44%), Gaps = 65/428 (15%)

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE--ELEAAERVFDMIK 390
           S IS     K++    +IHS  +KMG + D L    +I      E  ++  A +VFD I 
Sbjct: 9   SPISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIP 68

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN------ 444
              ++ WN+MI GY +  +      +++ M  S++ P+  T+  L+ G+ +N        
Sbjct: 69  QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKV 128

Query: 445 ----------------EDEAVDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQ 480
                           +   + +F      D  ++           +WN +++GY ++ Q
Sbjct: 129 LLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQ 188

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
              +  +F +M+     PN VT++ +L AC+ L      K I+  +    +E +L + N 
Sbjct: 189 FKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENV 248

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG------------------FW 582
           LID +A  G +  ++++FD M ++D+I+W S++ G+   G                   W
Sbjct: 249 LIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSW 308

Query: 583 HAALD-------------LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
            A +D             LF +M+   +KP+  T +SI+ A +  G ++LG+ V   I +
Sbjct: 309 TAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDK 368

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
              I       +A+ID+Y + G + +A +  ++M    D   W A++    I+G+ + A+
Sbjct: 369 -NSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMH-HKDKFTWTAMIVGLAINGHGEEAL 426

Query: 690 LAIERLFD 697
                + +
Sbjct: 427 AMFSNMIE 434



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 97/199 (48%), Gaps = 3/199 (1%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKT 95
           R  EA+ +   +     K    T +++L AC    ++ L   +  +++  + + D FV  
Sbjct: 320 RFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGN 379

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            L+ +Y KCG +  A++VF++M  ++ +TW+AMI   + +    E + +F  M++  + P
Sbjct: 380 ALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITP 439

Query: 156 DDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           D+  +  +L AC + G  E G+    S+ ++ G+         ++ +  + G+L  A   
Sbjct: 440 DEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEV 499

Query: 215 FESMDEK-DGVAWNSMISG 232
             +M  K + + W S++  
Sbjct: 500 IVNMPVKPNSIVWGSLLGA 518


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 219/654 (33%), Positives = 342/654 (52%), Gaps = 45/654 (6%)

Query: 254 IKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT 309
           IKLG    V T N L+  Y +LG  + A  +   M       D+ TW  M+ G+  NG  
Sbjct: 134 IKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMP----VRDIVTWNIMVDGYVSNGLG 189

Query: 310 SQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
           S AL  F+EM   + V  + V I +A++AC    +   G EIH   ++ G   D+ VG S
Sbjct: 190 SLALACFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQDIKVGTS 249

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           L++MY KC E+  A  VF  +  + V +WN MI GY       +A++ F++M+   +   
Sbjct: 250 LLDMYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVE 309

Query: 429 VITW-NVL--------------ISGYIQNGN-------EDEAVDLFQRMGK---NDKV-- 461
           V+T  N+L              + GY+           E   ++++ ++GK   ++K+  
Sbjct: 310 VVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFG 369

Query: 462 ---KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
               +   SWN++IA Y        A+ +F ++ +   YP+  T+ +V+PA   L +   
Sbjct: 370 KIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRH 429

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
            ++IH  ++      +  +MN+++  YA+SG++V SR IFD M SKD+I+WN++I GY +
Sbjct: 430 CRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAI 489

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           HG    AL++FD+MK  GL+PN  TF+S++ A S++G+VD G   F  + + Y +IP IE
Sbjct: 490 HGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIE 549

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
           HY  M DL GR G L E ++FIE MPI+P S +W +LLTA R   +ID+A  A ER+F L
Sbjct: 550 HYGCMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQL 609

Query: 699 EPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS 758
           E  +     ++  +YA  G+ ED  +VR L +E   R +     +E+ +   +F  G  S
Sbjct: 610 EHDNTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMS 669

Query: 759 ESYSDLLYS----WLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQ 814
            S S  ++       + + E    R+    + +       +   HS +LA+ F LI SS+
Sbjct: 670 HSQSRTIHEVSDILSRKIKETDDTRNQSYPVPV-ATRTTTMPNKHSVRLAVVFGLI-SSE 727

Query: 815 APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
               I + KN+R+C HCH   K +S      I + DSK  H F +G C CGDYW
Sbjct: 728 IGSPILVKKNVRICNHCHHALKLISRYSGRRIVVGDSKIYHEFSDGSCCCGDYW 781



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 215/484 (44%), Gaps = 71/484 (14%)

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           K+ ++S+ A+ G +D+A E    +R  + +  + MI  ++        +  +  M++DG 
Sbjct: 45  KSLVVSLAAE-GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD F FP +++ C   G  + G+  H +VIKLG+       NS++A Y K G +  A R
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAER 163

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--------------------CRE- 252
            F+ M  +D V WN M+ GY   G    A   F +M                    C E 
Sbjct: 164 VFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEVQHDSVGIIAALAACCLEF 223

Query: 253 ------EIKLGVVTFNI---------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                 EI   V+   +         L+  Y + G+   A  +   M        V TW 
Sbjct: 224 SSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMP----LRTVVTWN 279

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           CMI G+A N R  +A D F +M   G+    VT  + ++AC   ++   G  +H   V+ 
Sbjct: 280 CMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRR 339

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            F   V++  +L+ MY K  ++E++E++F  I +K + SWN+MIA Y       +A  LF
Sbjct: 340 QFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLF 399

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGN----------------------EDEAVDLFQRM 455
           +++    + P+  T + ++  ++  G+                       +  + ++ R 
Sbjct: 400 LELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARS 459

Query: 456 GK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           G         +  V ++  SWN++I GY   GQ   AL +F +M+ +   PN  T +SVL
Sbjct: 460 GDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVL 519

Query: 508 PACA 511
            AC+
Sbjct: 520 TACS 523



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 207/437 (47%), Gaps = 47/437 (10%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDA 110
           GA+  R T+  +++ C     +   R  H   + L  E DV+    L++ YAK G ++DA
Sbjct: 102 GARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDA 161

Query: 111 REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL--FPDDFLFPKILQACG 168
             VF+ M  R++ TW+ M+  Y  +      +  F  M  D L    D       L AC 
Sbjct: 162 ERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEM-HDALEVQHDSVGIIAALAAC- 219

Query: 169 NCGDFEA--GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
            C +F +  GK +H  VI+ G+    +V  S+L +Y KCG++ +AR  F +M  +  V W
Sbjct: 220 -CLEFSSMQGKEIHGYVIRHGLEQDIKVGTSLLDMYCKCGEVAYARSVFATMPLRTVVTW 278

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------------- 261
           N MI GY      DEA   F +M  E +++ VVT                          
Sbjct: 279 NCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVR 338

Query: 262 ----------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQ 311
                       L+  Y ++G+ + + ++  ++ +      + +W  MI+ +      ++
Sbjct: 339 RQFLPHVVLETALLEMYGKVGKVESSEKIFGKIAN----KTLVSWNNMIAAYMYKEMYTE 394

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           A+ LF E+    + P+  T+++ + A   L +L    +IHS  + +G+ ++ L+ N++++
Sbjct: 395 AITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLH 454

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MY++  ++ A+  +FD +  KDV SWN+MI GY   G    A E+F +M+ + + PN  T
Sbjct: 455 MYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNEST 514

Query: 432 WNVLISGYIQNGNEDEA 448
           +  +++    +G  DE 
Sbjct: 515 FVSVLTACSVSGLVDEG 531



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 142/294 (48%), Gaps = 8/294 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFV 93
           N R +EA      +  +G +V   T INLL AC  + S    R +H ++     +  V +
Sbjct: 288 NERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVL 347

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           +T LL +Y K G ++ + ++F  +  + L +W+ MI AY   + + E + LF  ++   L
Sbjct: 348 ETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPL 407

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           +PD F    ++ A    G     + +HS +I LG +    + N+VL +Y + G ++ +R 
Sbjct: 408 YPDYFTMSTVVPAFVLLGSLRHCRQIHSYIIGLGYAENTLIMNAVLHMYARSGDVVASRE 467

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M  KD ++WN+MI GY   G+   A  +FD+M    ++    TF  ++ + +  G 
Sbjct: 468 IFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGL 527

Query: 274 CDVA-MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            D   M     ++  G+ P +  + CM     + G      DL + + F+  MP
Sbjct: 528 VDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGREG------DLREVLQFIESMP 575



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 112/248 (45%), Gaps = 7/248 (2%)

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
           K     +PP   +   L+      G  DEAV+    +   D    N      +I G+   
Sbjct: 31  KEPPPRLPPKRGSSKSLVVSLAAEGRMDEAVEALAAVRGPDAFLHNV-----MIRGFADA 85

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           G    AL  +R M      P+  T   V+  CA L   ++ +  HG V++  LE  +   
Sbjct: 86  GLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVIKLGLEHDVYTC 145

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK-SFGL 597
           NSL+  YAK G +  +  +FDGM  +DI+TWN ++ GYV +G    AL  F +M  +  +
Sbjct: 146 NSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALACFQEMHDALEV 205

Query: 598 KPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
           + +    ++ + A  L      GK++   +   + +   I+  ++++D+Y + G++  A 
Sbjct: 206 QHDSVGIIAALAACCLEFSSMQGKEIHGYVIR-HGLEQDIKVGTSLLDMYCKCGEVAYAR 264

Query: 658 EFIEDMPI 665
                MP+
Sbjct: 265 SVFATMPL 272


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  355 bits (911), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 204/613 (33%), Positives = 330/613 (53%), Gaps = 20/613 (3%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+R+Y  L     A ++   +       +V     MI  +  NG   + + +F  M    
Sbjct: 80  LMRAYASLKDVASARKVFDEIPER----NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V P+  T    + AC+    + +G +IH  A K+G +  + VGN L++MY KC  L  A 
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
            V D +  +DV SWNS++ GY Q      A E+  +M+   +  +  T   L+       
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255

Query: 444 NED--EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            E+     D+F +MGK     ++  SWN +I  Y +      A+ ++ +M++  F P+ V
Sbjct: 256 TENVMYVKDMFFKMGK-----KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAV 310

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           +I SVLPAC    A +  K+IHG + R+ L  +L + N+LID YAK G +  +R +F+ M
Sbjct: 311 SITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM 370

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
            S+D+++W ++I  Y   G    A+ LF +++  GL P+   F++ + A S AG+++ G+
Sbjct: 371 KSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
             F  +T+ Y+I P +EH + M+DL GR+GK++EA  FI+DM +EP+  +W ALL ACR+
Sbjct: 431 SCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRV 490

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H + D+ +LA ++LF L P       L+  IYA  G+ E+   +R + +    + + G  
Sbjct: 491 HSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWL----QNVPENVTARSSHSGLC-IEEEEKEEIS 796
            +EV  +++TF+ G  S   SD +Y  L    + + E      S S L  +EEE+KE   
Sbjct: 551 NVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHL 610

Query: 797 GIHSEKLALAFALIGSSQ----APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
            +HSEKLA+ FAL+ + +    + +TIRI KN+R+C  CH  AK +S +   EI + D+ 
Sbjct: 611 AVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTN 670

Query: 853 CLHHFKNGQCSCG 865
             H F+ G CSC 
Sbjct: 671 RFHVFRFGVCSCA 683



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 150/533 (28%), Positives = 251/533 (47%), Gaps = 36/533 (6%)

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
           KL+  YA    +  AR+VF+++ ERN+   + MI +Y  +  + E V++F  M    + P
Sbjct: 79  KLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRP 138

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D + FP +L+AC   G    G+ +H    K+G+S    V N ++++Y KCG L  AR   
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           + M  +D V+WNS++ GY Q    D+A  +  +M   +I     T   L+ + +     +
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
           V    VK M        + +W  MI  + +N    +A++L+  M   G  P+ V+ITS +
Sbjct: 259 VMY--VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
            AC D  AL++G +IH    +     ++L+ N+LI+MY+KC  LE A  VF+ +K +DV 
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV 376

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           SW +MI+ Y  +G    A  LF K+Q+S + P+ I +   ++     G  +E    F+ M
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 436

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY--- 512
             + K+   T     L      LG+       +R +Q     PN     ++L AC     
Sbjct: 437 TDHYKI---TPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSD 493

Query: 513 ----LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI-- 566
               L+A++K+ ++         +S   V+  L + YAK+G       I + M SK +  
Sbjct: 494 TDIGLLAADKLFQL------APEQSGYYVL--LSNIYAKAGRWEEVTNIRNIMKSKGLKK 545

Query: 567 ------ITWNSLICGYVLHGFWHAALD--------LFDQMKSFGLKPNRGTFL 605
                 +  N +I  +++    H   D        L  +MK  G  P+  + L
Sbjct: 546 NPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESAL 598



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 100/447 (22%), Positives = 199/447 (44%), Gaps = 25/447 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFV 93
           NG   E + V  ++     +    T+  +L+AC  S +I + RK+H     V     +FV
Sbjct: 118 NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+S+Y KCG L +AR V ++M  R++ +W++++  Y+++QR+ + +E+   M    +
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             D      +L A  N    E    +  +  K+G   +    N ++ VY+K    + A  
Sbjct: 238 SHDAGTMASLLPAVSNTTT-ENVMYVKDMFFKMGKKSLVSW-NVMIGVYMKNAMPVEAVE 295

Query: 214 FFESMD----EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            +  M+    E D V+  S++             ++   + R+++   ++  N LI  Y 
Sbjct: 296 LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYA 355

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           + G  + A ++ + M+S     DV +WT MIS +  +GR   A+ LF ++   G++P+ +
Sbjct: 356 KCGCLEKARDVFENMKSR----DVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL------INMYSKCEELEAAE 383
              + ++AC+    L  G     L      TD   +   L      +++  +  +++ A 
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKL-----MTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466

Query: 384 R-VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
           R + DM  + +   W +++ G C+  +      L    +   + P    + VL+S     
Sbjct: 467 RFIQDMSMEPNERVWGALL-GACRV-HSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAK 524

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWN 469
               E V   + + K+  +K+N  + N
Sbjct: 525 AGRWEEVTNIRNIMKSKGLKKNPGASN 551



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 105/489 (21%), Positives = 204/489 (41%), Gaps = 59/489 (12%)

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
           FL  ++L       D    + +HS +I   + C   +   ++  Y     +  AR+ F+ 
Sbjct: 43  FLLGQVLDTYP---DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDE 99

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
           + E++ +  N MI  Y   G   E  ++F  MC   ++    TF  ++++ +  G   + 
Sbjct: 100 IPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIG 159

Query: 278 MEMVKRMESLGITP-------------------------------DVFTWTCMISGFAQN 306
            ++      +G++                                DV +W  ++ G+AQN
Sbjct: 160 RKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQN 219

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
            R   AL++ +EM  V +  +  T+ S + A ++     + M +  +  KMG    ++  
Sbjct: 220 QRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV-MYVKDMFFKMG-KKSLVSW 277

Query: 367 NSLINMYSK-CEELEAAERVFDMIKD---KDVYSWNSMIA--GYCQAGYCGKAYELFIKM 420
           N +I +Y K    +EA E    M  D    D  S  S++   G   A   GK    +I+ 
Sbjct: 278 NVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIER 337

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
           ++  + PN++  N LI  Y + G  ++A D+F+ M   D V     SW ++I+ Y   G+
Sbjct: 338 KK--LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV-----SWTAMISAYGFSGR 390

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC----VLRRSLESSLP 536
             +A+ +F K+Q S   P+ +  ++ L AC++   +  ++E   C         +   L 
Sbjct: 391 GCDAVALFSKLQDSGLVPDSIAFVTTLAACSH---AGLLEEGRSCFKLMTDHYKITPRLE 447

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            +  ++D   ++G +  +      MS   +   W +L+    +H      L   D++  F
Sbjct: 448 HLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL--F 505

Query: 596 GLKPNRGTF 604
            L P +  +
Sbjct: 506 QLAPEQSGY 514



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 18/202 (8%)

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           +L QK+    VF   Q    YP+  T+                + +H  ++   L  +  
Sbjct: 32  ELDQKSPQETVFLLGQVLDTYPDIRTL----------------RTVHSRIILEDLRCNSS 75

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           +   L+  YA   ++  +R +FD +  +++I  N +I  YV +GF+   + +F  M    
Sbjct: 76  LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           ++P+  TF  ++ A S +G + +G+K+  S T+   +   +   + ++ +YG+ G L EA
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV-GLSSTLFVGNGLVSMYGKCGFLSEA 194

Query: 657 MEFIEDMPIEPDSSIWEALLTA 678
              +++M    D   W +L+  
Sbjct: 195 RLVLDEMS-RRDVVSWNSLVVG 215


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  355 bits (910), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 213/588 (36%), Positives = 317/588 (53%), Gaps = 25/588 (4%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P+VF W CMI    +N    +A+ L+ EM      PN  T  + + AC+D   +A G+++
Sbjct: 100 PNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQV 159

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK----DVYSWNSMIAGYCQ 406
           H+  VK G   D  + +S I MY+    L  A R+ D   DK    D   WN+MI GY +
Sbjct: 160 HAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILD---DKGGEVDAVCWNAMIDGYLR 216

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
            G    A ELF  M +  +   + TWN +ISG+ + G  + A + F  M + D++     
Sbjct: 217 FGEVEAARELFEGMPDRSM---ISTWNAMISGFSRCGMVEVAREFFDEMKERDEI----- 268

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           SW+++I GY Q G    AL +F +MQ     P    + SVL ACA L A ++ + IH   
Sbjct: 269 SWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYA 328

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
            R S++    +  SL+D YAK G I  +  +F+ MS+K++ +WN++I G  +HG    A+
Sbjct: 329 KRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAI 388

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
           DLF +M    + PN  TF+ ++ A +  G+V  G  +F S+ + Y + P IEHY  ++DL
Sbjct: 389 DLFSKMD---INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDL 445

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GR+G L EA + +  +P EP  ++W ALL ACR HGN++L     + L +LEP +    
Sbjct: 446 LGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRY 505

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV-KNLVYTFVTGGWSESYSDLL 765
            L+  IYA  G+ E+  +VRKL +E   + + G   I++ +  V+ F+ G  S      +
Sbjct: 506 TLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDI 565

Query: 766 YSWLQNVPENVTARS-----SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIR 820
           Y  L  V E +         S     I+EEEKE     HSEKLA+ F LI +S    TIR
Sbjct: 566 YQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGT-TIR 624

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IVKN+R+C  CH   K +S +++ EI + D    HHF+NG CSC D+W
Sbjct: 625 IVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 672



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 218/432 (50%), Gaps = 20/432 (4%)

Query: 49  ATQGAKVRRNTYINLLQA-CIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGC 106
           +T+ +K+     ++LL   C  + S+H  ++ HA +     + D ++   L+  YA    
Sbjct: 24  STETSKLSHKAILHLLNTQC--TTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVST 81

Query: 107 -----LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFP 161
                 + +  VF+ +R+ N++ W+ MI     +    + + L++ M+     P+ + +P
Sbjct: 82  NRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYP 141

Query: 162 KILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM-DE 220
            +L+AC + G    G  +H+ ++K G+     + +S + +Y   G+L+ ARR  +    E
Sbjct: 142 AVLKACSDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGE 201

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM 280
            D V WN+MI GY + GE + A  LF+ M    +   + T+N +I  +++ G  +VA E 
Sbjct: 202 VDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSM---ISTWNAMISGFSRCGMVEVAREF 258

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
              M+      D  +W+ MI G+ Q G   +AL++F +M    + P    + S +SAC +
Sbjct: 259 FDEMKER----DEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACAN 314

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
           L AL  G  IH+ A +     D ++G SL++MY+KC  ++ A  VF+ + +K+V SWN+M
Sbjct: 315 LGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAM 374

Query: 401 IAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDK 460
           I G    G    A +LF KM   D+ PN IT+  +++     G   + + +F  M K   
Sbjct: 375 IGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYG 431

Query: 461 VKRNTASWNSLI 472
           V+     +  ++
Sbjct: 432 VEPQIEHYGCIV 443



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 172/360 (47%), Gaps = 13/360 (3%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
           GRL EA  +LD    +G +V    +  ++   +    +  AR+L  F  +     +    
Sbjct: 186 GRLVEARRILDD---KGGEVDAVCWNAMIDGYLRFGEVEAAREL--FEGMPDRSMISTWN 240

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            ++S +++CG ++ ARE F++M+ER+  +WSAMI  Y ++  + E +E+F  M ++ + P
Sbjct: 241 AMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRP 300

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
             F+ P +L AC N G  + G+ +H+   +  +     +  S++ +Y KCG++  A   F
Sbjct: 301 RKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVF 360

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           E M  K+  +WN+MI G    G  ++A  LF KM   +I    +TF  ++ +    G   
Sbjct: 361 EKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DINPNEITFVGVLNACAHGGLVQ 417

Query: 276 VAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
             + +   M +  G+ P +  + C++    + G  ++A    K +S +   P      + 
Sbjct: 418 KGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAE---KVVSSIPTEPTPAVWGAL 474

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           + AC     + +G  +  + +++   +       L N+Y+K    E    V  ++K++ +
Sbjct: 475 LGACRKHGNVELGERVGKILLELEPQNSGRY-TLLSNIYAKAGRWEEVGEVRKLMKERGI 533



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 131/273 (47%), Gaps = 21/273 (7%)

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
           K N   WN +I    +  +   A+ ++ +M  + F PN  T  +VL AC+      +  +
Sbjct: 99  KPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQ 158

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLHG 580
           +H  +++  L     +++S I  YA  G +V +R I D    + D + WN++I GY+  G
Sbjct: 159 VHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFG 218

Query: 581 FWHAALDLFDQMKSFGLKPNR---GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
              AA +LF+ M      P+R    T+ ++I   S  GMV++ ++ F  + E  +I    
Sbjct: 219 EVEAARELFEGM------PDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEI---- 268

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLTACRIHGNIDLA--VLAI 692
             +SAMID Y + G   EA+E    M    I P   +  ++L+AC   G +D    +   
Sbjct: 269 -SWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTY 327

Query: 693 ERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
            +   ++   VL   L+  +YA CG+ + A +V
Sbjct: 328 AKRNSIQLDGVLGTSLV-DMYAKCGRIDLAWEV 359



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 84/400 (21%), Positives = 169/400 (42%), Gaps = 25/400 (6%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT- 87
           +D     G   EA+ +   +  +  + R+    ++L AC +  ++   R +H +    + 
Sbjct: 274 IDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSI 333

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           ++D  + T L+ +YAKCG +D A EVFE M  + + +W+AMIG  +   R  + ++LF  
Sbjct: 334 QLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSK 393

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M    + P++  F  +L AC + G  + G  + +S+  + G+         ++ +  + G
Sbjct: 394 M---DINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAG 450

Query: 207 KLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            L  A +   S+  E     W +++    + G  +   R+  K+  E        + +L 
Sbjct: 451 LLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERV-GKILLELEPQNSGRYTLLS 509

Query: 266 RSYNQLGQCDVAMEMVKRMESLGI--TP----------DVFTWTCMISGFAQNGRTSQAL 313
             Y + G+ +   E+ K M+  GI  TP          +V  +        Q     Q L
Sbjct: 510 NIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQML 569

Query: 314 DLFKE-MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS--LI 370
           D  KE +   G  P+   +   I    + K  A+      LA+  G   +   G +  ++
Sbjct: 570 DKVKERLQMEGYEPDPSQVLFDID--EEEKETAVWQHSEKLAIGFGLI-NTSPGTTIRIV 626

Query: 371 NMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
                CE+  +A ++   + ++++   + +   + + G C
Sbjct: 627 KNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGAC 666


>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 684

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 214/699 (30%), Positives = 349/699 (49%), Gaps = 75/699 (10%)

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G L  A   F+ + E D   W  +ISG+ Q G   +A  ++  +    ++        + 
Sbjct: 25  GDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVA 84

Query: 266 RSYNQLGQCDVAMEMVKRMESLG-------------------------------ITPDVF 294
           ++    G   VA ++       G                               +  DV 
Sbjct: 85  KACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVV 144

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +WT M   +   G   Q + LF+EM   G+  N +T++S + AC D   + +G E+H   
Sbjct: 145 SWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY--IKLGREVHGFI 202

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           ++     +V V ++L+NMY+    L+ A  VFD +  +D+                    
Sbjct: 203 LRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDI-------------------- 242

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
                          ++WNV+++ Y  N   +  + LF +M K + +K N ASWN+ I+G
Sbjct: 243 ---------------VSWNVMLTAYFLNKEYERGLGLFHQMRK-EGIKLNQASWNAAISG 286

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS 534
             Q GQ   ALG+  KMQ S   PN +TI+S LP C  L +    KEIHG V R      
Sbjct: 287 CMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIED 346

Query: 535 LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
           + +  +L+  YAK G++  SR +F+ M  KD++ WN++I    +HG    +L LF++M  
Sbjct: 347 VTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLD 406

Query: 595 FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLE 654
            G++PN  TF+ ++   S + + D G  VF S++  + I P  +HYS M+D+  R+G+LE
Sbjct: 407 SGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLE 466

Query: 655 EAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYA 714
           EA +FI  MPIEP ++ W ALL ACR++ N++L  LA  +LF++EP +     L+  I  
Sbjct: 467 EAYDFIRKMPIEPTAAAWGALLGACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILV 526

Query: 715 ICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPE 774
              K  +A ++RK+ R+     + G+ W++VKN VY+FVTG  S    D++Y +L  + E
Sbjct: 527 TAKKWVEASEIRKMMRDKGLAKTPGRSWVQVKNKVYSFVTGDKSNEQKDMIYRFLDEIDE 586

Query: 775 NVTARSSHSGL-----CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCV 829
            +               +++E++EE    HSE+LA+AF ++ SS    T+R+ KN+R+C 
Sbjct: 587 KMRLDGYQPNTDFVLQNVDQEQREETLCSHSERLAVAFGILNSS-GKTTVRVFKNLRICG 645

Query: 830 HCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            CH   K ++ +   +I + DS   HHF++G C+C D+W
Sbjct: 646 DCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGYCTCNDFW 684



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 222/458 (48%), Gaps = 38/458 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           +G   +AI +  ++ ++  +  +   +++ +AC  S  + +A+K+H   +      D+ +
Sbjct: 55  HGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVL 114

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ ++ KC  ++ AR VF+DM  +++ +W++M   Y      R+ + LF  M  +G+
Sbjct: 115 GNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGI 174

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             +      IL AC +    + G+ +H  +++  M     V ++++ +Y     L  AR 
Sbjct: 175 RANSLTVSSILPACADY--IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARL 232

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+SM  +D V+WN M++ YF   E +    LF +M +E IKL   ++N  I    Q GQ
Sbjct: 233 VFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQ 292

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
            ++A+ ++ +M+  GI                                    PN +TI S
Sbjct: 293 HELALGILCKMQDSGIK-----------------------------------PNRITIVS 317

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
           A+  CT+L++L  G EIH    +  F +DV +  +L+ +Y+KC +LE +  VF+ +  KD
Sbjct: 318 ALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKD 377

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ 453
           V +WN+MI      G  G++  LF KM +S V PN +T+  ++SG   +   DE + +F 
Sbjct: 378 VVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFN 437

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            M     +  +   ++ ++    + G+   A    RKM
Sbjct: 438 SMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKM 475



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 74/142 (52%), Gaps = 3/142 (2%)

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           LI T   SG++  +  +FD +   D+ TW  LI G+  HGF   A+D++  + S  ++P+
Sbjct: 17  LIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPD 76

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
           +   LS+  A + +G + + KK+     + +     +   +A+ID++G+   +  A    
Sbjct: 77  KFVLLSVAKACAASGDLVVAKKIHDDAIQ-FGFNKDLVLGNALIDMFGKCKFVNGARCVF 135

Query: 661 EDMPIEPDSSIWEALLTACRIH 682
           +DM ++ D   W + +T C ++
Sbjct: 136 DDMVVK-DVVSWTS-MTYCYVN 155


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 236/755 (31%), Positives = 372/755 (49%), Gaps = 91/755 (12%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           F + L+ C    D   GK +H+L IK  +     + N  L +Y KC +L  ARR F    
Sbjct: 11  FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVF---- 66

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
                               D  H              V +FN LI +Y +    +VA +
Sbjct: 67  --------------------DHTH-----------DCNVFSFNTLISAYAKESYVEVAHQ 95

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           +   M      PD  ++  +I+ +A+ G T  A  LF EM    +  +G T++  I+AC 
Sbjct: 96  LFDEMPQ----PDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITAC- 150

Query: 340 DLKALAMGM--EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYS 396
               + +G+  ++H+L+V  G    V VGN+LI  YSK   L+ A R+F  + +D+D  S
Sbjct: 151 ---GINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVS 207

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---------------------NVL 435
           WNSM+  Y Q     KA EL+++M    +  ++ T                       ++
Sbjct: 208 WNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLI 267

Query: 436 ISGYIQNGNEDEA-VDLFQRMGK---------NDKVKRNTASWNSLIAGYQQLGQ-KNNA 484
            SGY QN +     +DL+ + G          ++    +   WN++I+GY       + A
Sbjct: 268 KSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEA 327

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS-LPVMNSLID 543
           L  FR++Q     P+  +++ V+ AC+ + + ++ +++HG  L+  + S+ + V N+LI 
Sbjct: 328 LECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIA 387

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGT 603
            Y+K GN+  ++T+FD M   + +++NS+I GY  HG    +L LF +M   G  P   T
Sbjct: 388 MYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNIT 447

Query: 604 FLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
           F+S++ A +  G V+ GK  F  + + + I P   H+S MIDL GR+GKL EA   IE +
Sbjct: 448 FISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETI 507

Query: 664 PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDAL 723
           P +P    W ALL ACRIHGN++LA+ A  RL  L+P +     ++  IY+  G+ +DA 
Sbjct: 508 PFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAA 567

Query: 724 KVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV----------P 773
            VRKL R+   +   G  WIEV   ++ FV           +  +L+ +          P
Sbjct: 568 SVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTP 627

Query: 774 ENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHE 833
           E  +A         + EE+  + G HSEKLA++F L+ S++    I + KN+R+CV CH 
Sbjct: 628 EVRSALVGGDDRVWQREEELRL-GHHSEKLAVSFGLM-STREGEPILVFKNLRICVDCHN 685

Query: 834 TAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             KY+S +   EI + DS   H FK+GQCSCG YW
Sbjct: 686 AIKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 131/521 (25%), Positives = 232/521 (44%), Gaps = 74/521 (14%)

Query: 58  NTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           + +   L+ CI    +   + LHA ++        ++    L +Y+KC  L  AR VF+ 
Sbjct: 9   HNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDH 68

Query: 117 MRERNLY-------------------------------TWSAMIGAYSRDQRWREVVELF 145
             + N++                               +++ +I AY+R    +   +LF
Sbjct: 69  THDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLF 128

Query: 146 FLMVQDGLFPDDFLFPKILQACG-NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
             M +  L  D F    I+ ACG N G     + +H+L +  G+     V N+++  Y K
Sbjct: 129 LEMREAFLDMDGFTLSGIITACGINVGLI---RQLHALSVVTGLDSYVSVGNALITSYSK 185

Query: 205 CGKLIWARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-- 261
            G L  ARR F  + E +D V+WNSM+  Y Q  E  +A  L+ +M    + + + T   
Sbjct: 186 NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLAS 245

Query: 262 ------NI------------LIRS-YNQ-----------LGQCDVAMEMVKRMESLGITP 291
                 N+            LI+S Y+Q             +C   M   +++      P
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305

Query: 292 DVFTWTCMISGFA-QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           D+  W  MISG++     + +AL+ F+++  VG  P+  ++   ISAC+++ + + G ++
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQV 365

Query: 351 HSLAVKMGF-TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           H LA+K+   ++ + V N+LI MYSKC  L  A+ +FD + + +  S+NSMIAGY Q G 
Sbjct: 366 HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
             ++  LF +M E    P  IT+  +++     G  ++    F  M +   ++     ++
Sbjct: 426 GFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFS 485

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            +I     LG+        R +++  F P      ++L AC
Sbjct: 486 CMI---DLLGRAGKLSEAERLIETIPFDPGFFFWSALLGAC 523



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 124/256 (48%), Gaps = 7/256 (2%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID---VFVKT 95
           +EA+     +   G +    + + ++ AC + +S    R++H  L L  +I    + V  
Sbjct: 325 DEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHG-LALKLDIPSNRISVNN 383

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            L+++Y+KCG L DA+ +F+ M E N  ++++MI  Y++     + + LF  M++ G  P
Sbjct: 384 ALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTP 443

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVI-KLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            +  F  +L AC + G  E GK+  +++  K G+       + ++ +  + GKL  A R 
Sbjct: 444 TNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERL 503

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDE-AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            E++    G  + S + G  +I  N E A +  +++ + +  L    + +L   Y+  G+
Sbjct: 504 IETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLD-PLNAAPYVMLANIYSDNGR 562

Query: 274 CDVAMEMVKRMESLGI 289
              A  + K M   G+
Sbjct: 563 LQDAASVRKLMRDRGV 578


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 237/784 (30%), Positives = 397/784 (50%), Gaps = 79/784 (10%)

Query: 58  NTYINL-LQACIDSNSIHLARKLHAFLNLVTEID-VFVKTKLLSVYAKCGCLDDAREVFE 115
           NT + L L+AC   N++   + +H  +     +D V V T ++  Y KCG ++DAR VF+
Sbjct: 53  NTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFD 112

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            M +R++  W+AM+  Y     + E + L   M ++ L P+      +L AC    +   
Sbjct: 113 AMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRL 172

Query: 176 GKLMHSLVIKLGM-SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
           G+ +H   ++ GM      V  +++  Y++    +     F+ M  ++ V+WN+MISGY+
Sbjct: 173 GRGVHGYCLRNGMFDSNPHVATALIGFYLRFDMRVLP-LLFDLMVVRNIVSWNAMISGYY 231

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG---------QCDVAMEMVKRME 285
            +G+  +A  LF +M  +E+K   VT  + +++  +LG         Q  +  E V+ + 
Sbjct: 232 DVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLY 291

Query: 286 SLGITPDVFT----------------------WTCMISGFAQNGRTSQALDLFKEMSFVG 323
            L    ++++                      W  MIS +A  G   +A+DLF  M   G
Sbjct: 292 ILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEG 351

Query: 324 VMPNGVTITSAISACTDLKA-LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           V  +  T+   +S C +L + L  G  +H+  +K G   D  +GN+L++MY++   +E+ 
Sbjct: 352 VKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESV 411

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT----------- 431
           +++FD +K  D+ SWN+MI    +     +A ELF +M+ES++ PN  T           
Sbjct: 412 QKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDV 471

Query: 432 ----WNVLISGYIQN--------------------GNEDEAVDLFQRMGKNDKVKRNTAS 467
               +   I GY+                      G+E  A DLF+  G  D   R+  S
Sbjct: 472 TCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFE--GCPD---RDLIS 526

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           WN++IA Y +  Q + AL +F +M S    PN VTI++VL +  +L    + + +H  V 
Sbjct: 527 WNAMIASYVKNNQAHKALLLFHRMISEA-EPNSVTIINVLSSFTHLATLPQGQSLHAYVT 585

Query: 528 RR--SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
           RR  SL   L + N+ I  YA+ G++  +  IF  +  ++II+WN++I GY ++G    A
Sbjct: 586 RRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDA 645

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           +  F QM   G +PN  TF+S++ A S +G +++G ++F S+ + + + P + HYS ++D
Sbjct: 646 MLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVD 705

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           L  R G ++EA EFI+ MPIEPD+S+W ALL++CR + +   A    E+L  LEP +   
Sbjct: 706 LLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGN 765

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
             L+  +YA  G   +  ++R   +E   R   G  WI VKN V+ F  G  S   SD +
Sbjct: 766 YVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKI 825

Query: 766 YSWL 769
           Y+ L
Sbjct: 826 YAKL 829



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 174/663 (26%), Positives = 287/663 (43%), Gaps = 95/663 (14%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDV 91
           G G   EA+ ++  +  +  +    T + LL AC  ++ + L R +H +   N + + + 
Sbjct: 131 GWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNP 190

Query: 92  FVKTKLLSVYAKCGCLDDARE---VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            V T L+  Y +     D R    +F+ M  RN+ +W+AMI  Y     + + +ELF  M
Sbjct: 191 HVATALIGFYLRF----DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQM 246

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           + D +  D       +QAC   G  + GK +H L IK        + N++L +Y   G L
Sbjct: 247 LVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSL 306

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------- 261
             + + FES+  +D   WNSMIS Y   G ++EA  LF +M  E +K    T        
Sbjct: 307 ESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMC 366

Query: 262 -----------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
                                        N L+  Y +L   +   ++  RM+ +    D
Sbjct: 367 EELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGV----D 422

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           + +W  MI   A+N   +QA +LF+ M    + PN  TI S ++AC D+  L  G  IH 
Sbjct: 423 IISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHG 482

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
             +K     +  +  +L +MY  C +   A  +F+   D+D+ SWN+MIA Y +     K
Sbjct: 483 YVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHK 542

Query: 413 AYELFIKMQESDVPPNVITWNVL------------------------------------I 436
           A  LF +M     P +V   NVL                                    I
Sbjct: 543 ALLLFHRMISEAEPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFI 602

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
           + Y + G+   A ++F+ +      KRN  SWN++IAGY   G+ ++A+  F +M    F
Sbjct: 603 TMYARCGSLQSAENIFKTLP-----KRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGF 657

Query: 497 YPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
            PN VT +SVL AC++       ++  H  V   ++   L   + ++D  A+ G I  +R
Sbjct: 658 RPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAR 717

Query: 556 TIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSL 613
              D M    D   W +L+     +     A  +F+++    L+P N G ++ +   ++ 
Sbjct: 718 EFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDK--LEPMNAGNYVLLSNVYAT 775

Query: 614 AGM 616
           AG+
Sbjct: 776 AGL 778



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 178/383 (46%), Gaps = 37/383 (9%)

Query: 284 MESLGITP------DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
           ++ L ++P      D   W  +I   A        L  + +M  +GV+PN  T+   + A
Sbjct: 3   LQRLTLSPTKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKA 62

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C    A+  G  IH         DDV VG ++++ Y KC  +E A  VFD + D+DV  W
Sbjct: 63  CAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLW 122

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL---------------ISGY-IQ 441
           N+M+ GY   G   +A  L  +M   ++ PN  T   L               + GY ++
Sbjct: 123 NAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLR 182

Query: 442 NG----NEDEAVDLFQRMGKND----------KVKRNTASWNSLIAGYQQLGQKNNALGV 487
           NG    N   A  L     + D           V RN  SWN++I+GY  +G    AL +
Sbjct: 183 NGMFDSNPHVATALIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALEL 242

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           F +M       +CVT+L  + ACA L +    K+IH   ++      L ++N+L++ Y+ 
Sbjct: 243 FVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSN 302

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
           +G++  S  +F+ + ++D   WNS+I  Y   G    A+DLF +M+S G+K +  T + +
Sbjct: 303 NGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIM 362

Query: 608 I-LAHSLAGMVDLGKKVFCSITE 629
           + +   LA  +  GK +   + +
Sbjct: 363 LSMCEELASGLLKGKSLHAHVIK 385



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 4/189 (2%)

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
           ++   WNS+I     L      L  + +M+S    PN  T+  VL ACA   A  + K I
Sbjct: 16  KDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSI 75

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           H  +    L   + V  +++D Y K G +  +R +FD MS +D++ WN+++ GYV  G +
Sbjct: 76  HRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCY 135

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV--FCSITECYQIIPMIEHY 640
             A+ L  +M    L+PN  T ++++LA   A  + LG+ V  +C     +   P +   
Sbjct: 136 EEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVA-- 193

Query: 641 SAMIDLYGR 649
           +A+I  Y R
Sbjct: 194 TALIGFYLR 202


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 246/805 (30%), Positives = 377/805 (46%), Gaps = 141/805 (17%)

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           V+A Y+ CG    A    E +     V WN ++  + + G  D A  +  +M R   K  
Sbjct: 89  VVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPD 148

Query: 258 VVTFNILIRSYNQLGQ----------------------CDVAMEMVKRMESL-------- 287
             T    +++  +L                        C+  + M  R  SL        
Sbjct: 149 HFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFD 208

Query: 288 -----GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV------GVMPNGVTITSAIS 336
                GI  DV +W  +++   +      ALDLF EM+ +          + ++I + + 
Sbjct: 209 EITRKGID-DVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILP 267

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           AC  LKAL    EIHS A++ G   D  V N+LI+ Y+KC  ++ A  VF++++ KDV S
Sbjct: 268 ACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVS 327

Query: 397 WNSM-----------------------------------IAGYCQAGYCGKAYELFIKMQ 421
           WN+M                                   IAGY Q GY  +A + F +M 
Sbjct: 328 WNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMI 387

Query: 422 ESDVPPNVITWNVLIS-----GYIQNGNEDEA---------------------------- 448
                PN +T   L+S     G +  G E  A                            
Sbjct: 388 LYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNA 447

Query: 449 -VDLFQR----------MGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
            +D++ +               + +RN  +W  +I GY Q G  N+AL +F +M S  + 
Sbjct: 448 LIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYA 507

Query: 498 --PNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLP-VMNSLIDTYAKSGNIVY 553
             PN  TI  +L ACA+L +    K+IH  V R    ESS+  V N LID Y+K G++  
Sbjct: 508 VAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDT 567

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           +R +FD M  ++ ++W S++ GY +HG    ALD+FD+M+  G  P+  +FL ++ A S 
Sbjct: 568 ARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSH 627

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           +GMVD G   F  +   Y +I   +HY+ +IDL  RSG+L++A + I++MP+EP ++IW 
Sbjct: 628 SGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWV 687

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
           ALL+ACR+H N++LA  A+ +L  ++  +     LI  IYA   + +D  ++R+L +++ 
Sbjct: 688 ALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSG 747

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPENVTARSSHS 783
            +   G  W++ K    +F  G  S   S  +YS L+           VPE   A     
Sbjct: 748 IKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERLIGRIKVMGYVPETNFALHD-- 805

Query: 784 GLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHH 843
              +++EEK  +   HSEKLALA+ L+ +S     IRI KN+R+C  CH    Y+S +  
Sbjct: 806 ---VDDEEKNNLLTEHSEKLALAYGLLTTSPGC-PIRITKNLRVCGDCHSAFIYISKIVD 861

Query: 844 CEIFLADSKCLHHFKNGQCSCGDYW 868
            EI + DS   HHFKNG CSCG YW
Sbjct: 862 HEIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/535 (28%), Positives = 243/535 (45%), Gaps = 93/535 (17%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           GRL+ AI V   +   G K    T    L+AC +  S       H  +     E +VFV 
Sbjct: 128 GRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVC 187

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRER---NLYTWSAMIGAYSRDQRWREVVELFFLMVQ- 150
             L+++Y++ G L+DA  VF+++  +   ++ +W++++ A+ +    R  ++LF  M   
Sbjct: 188 NALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTI 247

Query: 151 -----DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
                     D      IL AC +       K +HS  I+ G      V N+++  Y KC
Sbjct: 248 VHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKC 307

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G +  A   F  M+ KD V+WN+M++GY Q G+   A  LF  M +E I L V+T++ +I
Sbjct: 308 GSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVI 367

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             Y Q G    A++  ++M   G  P+  T                              
Sbjct: 368 AGYAQRGYGQEALDTFQQMILYGSEPNSVT------------------------------ 397

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVK------------MGFTDDVLVGNSLINMY 373
                I S +SAC  L AL+ GME H+ ++K             G  +D++V N+LI+MY
Sbjct: 398 -----IISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMY 452

Query: 374 SKCEELEAAERVFDMI--KDKDVYSWNSMIAGYCQAGYCGKAYELFIKM--QESDVPPNV 429
           SKC   +AA  +F+ I  ++++V +W  MI GY Q G    A +LF +M  +   V PN 
Sbjct: 453 SKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNA 512

Query: 430 ITWNVL---------------ISGYIQNGNEDEA---------VDLFQRMGKNDKV---- 461
            T + +               I  Y+   +E E+         +D++ + G  D      
Sbjct: 513 YTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVF 572

Query: 462 ----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
               KRN  SW S+++GY   G+   AL +F KMQ + F P+ ++ L +L AC++
Sbjct: 573 DSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSH 627



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 153/323 (47%), Gaps = 23/323 (7%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF------LNLVTEI 89
           G   EA+     +   G++    T I+LL AC    ++    + HA+      L+L  + 
Sbjct: 374 GYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDF 433

Query: 90  D-------VFVKTKLLSVYAKCGCLDDAREVFEDM--RERNLYTWSAMIGAYSRDQRWRE 140
                   + V   L+ +Y+KC     AR +F  +  RERN+ TW+ MIG Y++     +
Sbjct: 434 GGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSND 493

Query: 141 VVELFFLMVQD--GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG--MSCVRRVRN 196
            ++LF  M+     + P+ +    IL AC +      GK +H+ V +     S V  V N
Sbjct: 494 ALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVAN 553

Query: 197 SVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL 256
            ++ +Y KCG +  AR  F+SM +++ V+W SM+SGY   G   EA  +FDKM +     
Sbjct: 554 CLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVP 613

Query: 257 GVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDL 315
             ++F +L+ + +  G  D  ++    M S  G+      + C+I   A++GR  +A   
Sbjct: 614 DDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKT 673

Query: 316 FKEMSFVGVMPNGVTITSAISAC 338
            +EM    + P+     + +SAC
Sbjct: 674 IQEMP---MEPSAAIWVALLSAC 693


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 212/615 (34%), Positives = 331/615 (53%), Gaps = 24/615 (3%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+RSY   G+  +  ++   M       +V  +  MI  +  N R    L +F+EM   G
Sbjct: 59  LMRSYAACGEPGLTRKVFDEMSD----RNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGG 114

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
             P+  T    + AC+  + L  G+ IH   +K+G   ++ VGN LI MY KC  L  A 
Sbjct: 115 FRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEAR 174

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
           RVFD +  KDV SWNSM+AGY        A E+  +M++    P+  T   L+       
Sbjct: 175 RVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTS 234

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           +E+  V   +++  N + ++N  SWN +I  Y +      A+ ++ +M+     P+ +T 
Sbjct: 235 SEN--VLYVEKIFVNLE-RKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITF 291

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
            SVLPAC  L A    + IH  V ++ L  +L + NSLID YA+ G +  ++ +FD M  
Sbjct: 292 ASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKF 351

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           +D+ +W SLI  Y + G    A+ LF +M + G  P+   F++I+ A S +G++D G+  
Sbjct: 352 RDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIY 411

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           F  +T+ Y+I P IEHY+ ++DL GR+G+++EA   I+ MPIEP+  +W  LL++CR+  
Sbjct: 412 FKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFT 471

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
           N+D+ +LA + L  L P       L+  IYA  G+ ++  ++R + +    R + G   +
Sbjct: 472 NMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNV 531

Query: 744 EVKNLVYTFVTGGWSESYSDLLY----------SWLQNVPENVTARSSHSGLCIEEEEKE 793
           E+ N V+TF+ G  S   S  +Y            L  VPE  +A        +EEE+KE
Sbjct: 532 ELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSALHD-----VEEEDKE 586

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
               +HSEKLA+ FAL+ + +  + IRI KN+R+C  CH  AK +S +   EI + D+  
Sbjct: 587 GHLAVHSEKLAIVFALLNTQE--YQIRITKNLRVCGDCHIAAKLISKIVEREIIVRDTNR 644

Query: 854 LHHFKNGQCSCGDYW 868
            HHFK+G CSCGDYW
Sbjct: 645 FHHFKDGVCSCGDYW 659



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 141/457 (30%), Positives = 234/457 (51%), Gaps = 13/457 (2%)

Query: 59  TYINLLQACIDSNS-IHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           T   LL   +D N  I   +KLH  +  L +  +  +  KL+  YA CG     R+VF++
Sbjct: 19  TSFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDE 78

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M +RN+  ++ MI +Y  + R+ + + +F  MV  G  PD++ +P +L+AC    +   G
Sbjct: 79  MSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYG 138

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
            L+H  V+K+G+     V N ++A+Y KCG L  ARR F+ M  KD V+WNSM++GY   
Sbjct: 139 LLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHN 198

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT---PDV 293
              D+A     ++CRE    G       + S       + + E V  +E + +     ++
Sbjct: 199 MRFDDAL----EICREMEDYGQKPDGCTMASL-MPAVANTSSENVLYVEKIFVNLERKNL 253

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            +W  MI  + +N   +QA+DL+ +M    V P+ +T  S + AC DL AL +G  IH  
Sbjct: 254 ISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEY 313

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
             K     ++L+ NSLI+MY++C  L+ A+RVFD +K +DV SW S+I+ Y   G    A
Sbjct: 314 VEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNA 373

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
             LF +M  S   P+ I +  ++S    +G  DE    F++M  + ++      +  L+ 
Sbjct: 374 VALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVD 433

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
              + G+ + A  + ++M      PN     ++L +C
Sbjct: 434 LLGRAGRVDEAYNIIKQMP---IEPNERVWATLLSSC 467



 Score = 47.4 bits (111), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 77/160 (48%), Gaps = 2/160 (1%)

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           +K++H  +   +   +  +   L+ +YA  G    +R +FD MS ++++ +N +I  YV 
Sbjct: 37  LKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVN 96

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           +  +   L +F +M + G +P+  T+  ++ A S +  +  G  +   + +      +  
Sbjct: 97  NHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFV 156

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
             + +I +YG+ G L EA    ++M I  D   W +++  
Sbjct: 157 G-NGLIAMYGKCGCLFEARRVFDEM-IWKDVVSWNSMVAG 194


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 210/619 (33%), Positives = 322/619 (52%), Gaps = 48/619 (7%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++F +  MI G   N    ++++++  M   G+ P+  T    + AC  +    +G+++
Sbjct: 71  PNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKM 130

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           HSL VK G   D  V  SLIN+Y+KC  ++ A +VFD I DK+  SW + I+GY   G C
Sbjct: 131 HSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKC 190

Query: 411 GKAYELFIKMQESDVPP-----------------------------------NVITWNVL 435
            +A ++F ++ E  + P                                   NV     L
Sbjct: 191 REAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATAL 250

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           +  Y + GN + A  +F  M     +++N  SW+S+I GY   G    AL +F KM +  
Sbjct: 251 VDFYGKCGNMERARSVFDGM-----LEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEG 305

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
             P+C  ++ VL +CA L A          +       +  +  +LID YAK G +  + 
Sbjct: 306 LKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAW 365

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            +F GM  KD + WN+ I G  + G    AL LF QM+  G+KP+R TF+ ++ A + AG
Sbjct: 366 EVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAG 425

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
           +V+ G++ F S+   + + P IEHY  M+DL GR+G L+EA + I+ MP+E ++ +W AL
Sbjct: 426 LVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGAL 485

Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
           L  CR+H +  L  + +++L  LEP       L+  IYA   K E+A K+R +  E   +
Sbjct: 486 LGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVK 545

Query: 736 NSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA-----RSSHSGLCIEEE 790
              G  WIEV  +V+ F+ G  S   S+ +Y+ L  + +++ A      + H    IEEE
Sbjct: 546 KIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTDHVLFDIEEE 605

Query: 791 EKEEISGIHSEKLALAFALIGSSQAPH-TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
           EKE   G HSEKLA+AF LI  S AP+  I +VKN+R+C  CHE  K++S +   EI + 
Sbjct: 606 EKEHFIGCHSEKLAVAFGLI--STAPNDKILVVKNLRVCGDCHEAIKHISRIAGREIIVR 663

Query: 850 DSKCLHHFKNGQCSCGDYW 868
           D+   H F +G CSC DYW
Sbjct: 664 DNNRFHCFTDGLCSCKDYW 682



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 205/414 (49%), Gaps = 33/414 (7%)

Query: 74  HLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYS 133
           HL     A L L  + D ++  K+L      G  + +  + +  +E N++ ++ MI    
Sbjct: 25  HLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLV 84

Query: 134 RDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR 193
            +  ++E +E++  M ++GL PD F FP +L+AC    D E G  MHSLV+K G      
Sbjct: 85  LNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAF 144

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---- 249
           V+ S++ +Y KCG +  A + F+ + +K+  +W + ISGY  +G+  EA  +F ++    
Sbjct: 145 VKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMG 204

Query: 250 --------------CRE--EIKLG-----VVTFNILIRS-------YNQLGQCDVAMEMV 281
                         C+   +++ G      +T N ++R+        +  G+C   ME  
Sbjct: 205 LRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCG-NMERA 263

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
           + +    +  ++ +W+ MI G+A NG   +ALDLF +M   G+ P+   +   + +C  L
Sbjct: 264 RSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARL 323

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
            AL +G    +L     F D+ ++G +LI+MY+KC  ++ A  VF  ++ KD   WN+ I
Sbjct: 324 GALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAI 383

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           +G   +G+   A  LF +M++S + P+  T+  L+      G  +E    F  M
Sbjct: 384 SGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSM 437



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 218/490 (44%), Gaps = 43/490 (8%)

Query: 17  TKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA 76
           TK+ N    +T +  L  N    E+I +  S+  +G      T+  +L+AC       L 
Sbjct: 68  TKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELG 127

Query: 77  RKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
            K+H+ +     E D FVK  L+++Y KCG +D+A +VF+D+ ++N  +W+A I  Y   
Sbjct: 128 VKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGV 187

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
            + RE +++F  +++ GL PD F   ++L AC   GD  +G+ +   + + GM     V 
Sbjct: 188 GKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVA 247

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
            +++  Y KCG +  AR  F+ M EK+ V+W+SMI GY   G   EA  LF KM  E +K
Sbjct: 248 TALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLK 307

Query: 256 ------LGV-----------------------------VTFNILIRSYNQLGQCDVAMEM 280
                 +GV                             V    LI  Y + G+ D A E+
Sbjct: 308 PDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEV 367

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
            + M       D   W   ISG A +G    AL LF +M   G+ P+  T    + ACT 
Sbjct: 368 FRGMRK----KDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTH 423

Query: 341 LKALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWN 398
              +  G    +S+      T ++     ++++  +   L EA + +  M  + +   W 
Sbjct: 424 AGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWG 483

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           +++ G C+     +  E+ +K   +  P +   + +L + Y  +   +EA  +   M + 
Sbjct: 484 ALLGG-CRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSER 542

Query: 459 DKVKRNTASW 468
              K    SW
Sbjct: 543 GVKKIPGYSW 552



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 2/180 (1%)

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           +K IH  +LR  L+    ++N ++      GN  YS  I D     +I  +N++I G VL
Sbjct: 26  LKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVL 85

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           +  +  +++++  M+  GL P+  TF  ++ A +     +LG K+   + +         
Sbjct: 86  NDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFV 145

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
             S +I+LY + G ++ A +  +D+P + + + W A ++     G    A+    RL ++
Sbjct: 146 KIS-LINLYTKCGFIDNAFKVFDDIP-DKNFASWTATISGYVGVGKCREAIDMFRRLLEM 203


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 213/588 (36%), Positives = 317/588 (53%), Gaps = 25/588 (4%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P+VF W CMI    +N    +A+ L+ EM      PN  T  + + AC+D   +A G+++
Sbjct: 101 PNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQV 160

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK----DVYSWNSMIAGYCQ 406
           H+  VK G   D  + +S I MY+    L  A R+ D   DK    D   WN+MI GY +
Sbjct: 161 HAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILD---DKGGEVDAVCWNAMIDGYLR 217

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
            G    A ELF  M +  +   + TWN +ISG+ + G  + A + F  M + D++     
Sbjct: 218 FGEVEAARELFEGMPDRSM---ISTWNAMISGFSRCGMVEVAREFFDEMKERDEI----- 269

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           SW+++I GY Q G    AL +F +MQ     P    + SVL ACA L A ++ + IH   
Sbjct: 270 SWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYA 329

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
            R S++    +  SL+D YAK G I  +  +F+ MS+K++ +WN++I G  +HG    A+
Sbjct: 330 KRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAI 389

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
           DLF +M  +   PN  TF+ ++ A +  G+V  G  +F S+ + Y + P IEHY  ++DL
Sbjct: 390 DLFSKMDIY---PNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDL 446

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GR+G L EA + +  +P EP  ++W ALL ACR HGN++L     + L +LEP +    
Sbjct: 447 LGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRY 506

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV-KNLVYTFVTGGWSESYSDLL 765
            L+  IYA  G+ E+  +VRKL +E   + + G   I++ +  V+ F+ G  S      +
Sbjct: 507 TLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDI 566

Query: 766 YSWLQNVPENVTARS-----SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIR 820
           Y  L  V E +         S     I+EEEKE     HSEKLA+ F LI +S    TIR
Sbjct: 567 YQMLDKVKERLQMEGYEPDPSQVLFDIDEEEKETAVWQHSEKLAIGFGLINTSPGT-TIR 625

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IVKN+R+C  CH   K +S +++ EI + D    HHF+NG CSC D+W
Sbjct: 626 IVKNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGACSCKDFW 673



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 218/432 (50%), Gaps = 20/432 (4%)

Query: 49  ATQGAKVRRNTYINLLQA-CIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGC 106
           +T+ +K+     ++LL   C  + S+H  ++ HA +     + D ++   L+  YA    
Sbjct: 25  STETSKLSHKAILHLLNTQC--TTSLHHLKQAHALILRTGHLQDSYIAGSLVKSYANVST 82

Query: 107 -----LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFP 161
                 + +  VF+ +R+ N++ W+ MI     +    + + L++ MV     P+ + +P
Sbjct: 83  NRYLSFESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYP 142

Query: 162 KILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM-DE 220
            +L+AC + G    G  +H+ ++K G+     + +S + +Y   G+L+ ARR  +    E
Sbjct: 143 AVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGE 202

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM 280
            D V WN+MI GY + GE + A  LF+ M    +   + T+N +I  +++ G  +VA E 
Sbjct: 203 VDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSM---ISTWNAMISGFSRCGMVEVAREF 259

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
              M+      D  +W+ MI G+ Q G   +AL++F +M    + P    + S +SAC +
Sbjct: 260 FDEMKER----DEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACAN 315

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
           L AL  G  IH+ A +     D ++G SL++MY+KC  ++ A  VF+ + +K+V SWN+M
Sbjct: 316 LGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAM 375

Query: 401 IAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDK 460
           I G    G    A +LF KM   D+ PN IT+  +++     G   + + +F  M K   
Sbjct: 376 IGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYG 432

Query: 461 VKRNTASWNSLI 472
           V+     +  ++
Sbjct: 433 VEPQIEHYGCIV 444



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 172/360 (47%), Gaps = 13/360 (3%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
           GRL EA  +LD    +G +V    +  ++   +    +  AR+L  F  +     +    
Sbjct: 187 GRLVEARRILDD---KGGEVDAVCWNAMIDGYLRFGEVEAAREL--FEGMPDRSMISTWN 241

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            ++S +++CG ++ ARE F++M+ER+  +WSAMI  Y ++  + E +E+F  M ++ + P
Sbjct: 242 AMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRP 301

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
             F+ P +L AC N G  + G+ +H+   +  +     +  S++ +Y KCG++  A   F
Sbjct: 302 RKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVF 361

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           E M  K+  +WN+MI G    G  ++A  LF KM   +I    +TF  ++ +    G   
Sbjct: 362 EKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPNEITFVGVLNACAHGGLVQ 418

Query: 276 VAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
             + +   M +  G+ P +  + C++    + G  ++A    K +S +   P      + 
Sbjct: 419 KGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAE---KVVSSIPTEPTPAVWGAL 475

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           + AC     + +G  +  + +++   +       L N+Y+K    E    V  ++K++ +
Sbjct: 476 LGACRKHGNVELGERVGKILLELEPQNSGRY-TLLSNIYAKAGRWEEVGEVRKLMKERGI 534



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 130/273 (47%), Gaps = 21/273 (7%)

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
           K N   WN +I    +  +   A+ ++ +M  +   PN  T  +VL AC+      +  +
Sbjct: 100 KPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQ 159

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLHG 580
           +H  +++  L     +++S I  YA  G +V +R I D    + D + WN++I GY+  G
Sbjct: 160 VHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFG 219

Query: 581 FWHAALDLFDQMKSFGLKPNR---GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
              AA +LF+ M      P+R    T+ ++I   S  GMV++ ++ F  + E  +I    
Sbjct: 220 EVEAARELFEGM------PDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEI---- 269

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLTACRIHGNIDLA--VLAI 692
             +SAMID Y + G   EA+E    M    I P   +  ++L+AC   G +D    +   
Sbjct: 270 -SWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTY 328

Query: 693 ERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
            +   ++   VL   L+  +YA CG+ + A +V
Sbjct: 329 AKRNSIQLDGVLGTSLV-DMYAKCGRIDLAWEV 360



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 84/400 (21%), Positives = 170/400 (42%), Gaps = 25/400 (6%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT- 87
           +D     G   EA+ +   +  +  + R+    ++L AC +  ++   R +H +    + 
Sbjct: 275 IDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSI 334

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           ++D  + T L+ +YAKCG +D A EVFE M  + + +W+AMIG  +   R  + ++LF  
Sbjct: 335 QLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSK 394

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M    ++P++  F  +L AC + G  + G  + +S+  + G+         ++ +  + G
Sbjct: 395 M---DIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAG 451

Query: 207 KLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            L  A +   S+  E     W +++    + G  +   R+  K+  E        + +L 
Sbjct: 452 LLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERV-GKILLELEPQNSGRYTLLS 510

Query: 266 RSYNQLGQCDVAMEMVKRMESLGI--TP----------DVFTWTCMISGFAQNGRTSQAL 313
             Y + G+ +   E+ K M+  GI  TP          +V  +        Q     Q L
Sbjct: 511 NIYAKAGRWEEVGEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIGDGSHPQVKDIYQML 570

Query: 314 DLFKE-MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS--LI 370
           D  KE +   G  P+   +   I    + K  A+      LA+  G   +   G +  ++
Sbjct: 571 DKVKERLQMEGYEPDPSQVLFDID--EEEKETAVWQHSEKLAIGFGLI-NTSPGTTIRIV 627

Query: 371 NMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
                CE+  +A ++   + ++++   + +   + + G C
Sbjct: 628 KNLRVCEDCHSATKLISQVYNREIIVRDRIRYHHFRNGAC 667


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 224/651 (34%), Positives = 332/651 (50%), Gaps = 79/651 (12%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P+   W  MI G A +     +L L+  M  +G++PN  T    + +C   K    G +I
Sbjct: 27  PNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQI 86

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELE------------------------------ 380
           H   +K+GF  D+ V  SLI+MY +   LE                              
Sbjct: 87  HGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDI 146

Query: 381 -AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------- 432
            +A+++FD I  KDV SWN+MI+GY + G   +A ELF +M + +V P+  T+       
Sbjct: 147 RSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSAC 206

Query: 433 ----------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                                       N LI  Y + G  + A  LFQ +   D +   
Sbjct: 207 AHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVI--- 263

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             SWN+LI GY  +     AL +F++M  S   PN VT+LSVLPACA+L A +  + IH 
Sbjct: 264 --SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHV 321

Query: 525 CVLRR--SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
            + +R   + ++  +  SLID YAK G+I  +  +F+ M  K + +WN++I G+ +HG  
Sbjct: 322 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRA 381

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
            A+ DLF +M+  G++P+  TF+ ++ A S +GM+DLG+ +F S+T+ Y++ P +EHY  
Sbjct: 382 DASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGC 441

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           MIDL G SG  +EA E I  M +EPD  IW +LL AC++HGN++LA    + L  +EP +
Sbjct: 442 MIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPEN 501

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGW----- 757
                L+  IYA  G+ ED  ++R L      +   G   IEV ++V+ FV G       
Sbjct: 502 PSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVVGDKFHPQN 561

Query: 758 SESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
            E Y  L    +          +S     +EEE KE     HSEKLA+AF LI S++   
Sbjct: 562 REIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI-STKPGT 620

Query: 818 TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            + IVKN+R+C +CHE  K +S ++  EI   D    HHF++G CSC DYW
Sbjct: 621 KLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDYW 671



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 212/469 (45%), Gaps = 75/469 (15%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A  VFE ++E N   W+ MI  ++        + L+  MV  GL P+ + FP +L++C  
Sbjct: 17  ATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAK 76

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
              F  G+ +H  V+KLG      V  S++++YV+  +L  A + F+    +D V++ ++
Sbjct: 77  SKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTAL 136

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           I+GY   G+   A +LFD++  ++    VV++N +I  Y + G    A+E+ + M  + +
Sbjct: 137 ITGYASRGDIRSAQKLFDEIPVKD----VVSWNAMISGYAETGCYKEALELFEEMMKMNV 192

Query: 290 TPDVFTWTCMIS---------------------GFAQN--------------GRTSQALD 314
            PD  T+  ++S                     GF  N              G    A  
Sbjct: 193 RPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACG 252

Query: 315 LFKEMSFVGVM-------------------------------PNGVTITSAISACTDLKA 343
           LF+ +S+  V+                               PN VT+ S + AC  L A
Sbjct: 253 LFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGA 312

Query: 344 LAMGMEIHSLAVKM--GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
           + +G  IH    K   G T+   +  SLI+MY+KC ++EAA +VF+ +  K + SWN+MI
Sbjct: 313 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMI 372

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
            G+   G    +++LF +M++  + P+ IT+  L+S    +G  D    +F+ M ++ K+
Sbjct: 373 FGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKM 432

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                 +  +I      G    A  +   M+     P+ V   S+L AC
Sbjct: 433 TPKLEHYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKAC 478



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 160/308 (51%), Gaps = 7/308 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
            G   EA+ + + +     +   +TY+ +L AC  S SI L R++H+++ +   + ++ +
Sbjct: 174 TGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKI 233

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y+KCG ++ A  +F+ +  +++ +W+ +IG Y+    ++E + LF  M++ G 
Sbjct: 234 VNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 293

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL--GMSCVRRVRNSVLAVYVKCGKLIWA 211
            P+D     +L AC + G  + G+ +H  + K   G++    +R S++ +Y KCG +  A
Sbjct: 294 TPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 353

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
            + F SM  K   +WN+MI G+   G  D +  LF +M +  I+   +TF  L+ + +  
Sbjct: 354 HQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHS 413

Query: 272 GQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  D+   + + M +   +TP +  + CMI     +G   +A ++   M    + P+GV 
Sbjct: 414 GMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVI 470

Query: 331 ITSAISAC 338
             S + AC
Sbjct: 471 WCSLLKAC 478



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 121/530 (22%), Positives = 218/530 (41%), Gaps = 102/530 (19%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLS 99
           ++T+   + + G      T+  LL++C  S +    +++H   L L  ++D++V T L+S
Sbjct: 48  SLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLIS 107

Query: 100 VYAKCGCLDDAREVFE---------------------DMRE----------RNLYTWSAM 128
           +Y +   L+DA +VF+                     D+R           +++ +W+AM
Sbjct: 108 MYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAM 167

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM 188
           I  Y+    ++E +ELF  M++  + PD+  +  +L AC + G  E G+ +HS V   G 
Sbjct: 168 ISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGF 227

Query: 189 SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
               ++ N+++ +Y KCG++  A   F+ +  KD ++WN++I GY  +    EA  LF +
Sbjct: 228 DSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQE 287

Query: 249 MCREEIKLGVVTFNILIRSYNQLGQCDVA------------------------MEMVKRM 284
           M R       VT   ++ +   LG  D+                         ++M  + 
Sbjct: 288 MLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 347

Query: 285 ESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
             +     VF         +W  MI GFA +GR   + DLF  M  +G+ P+ +T    +
Sbjct: 348 GDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLL 407

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
           SAC+    L +G  I                 S+   Y    +LE               
Sbjct: 408 SACSHSGMLDLGRHIF---------------RSMTQDYKMTPKLE--------------- 437

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
            +  MI     +G   +A E+   M+   + P+ + W  L+     +GN + A    Q +
Sbjct: 438 HYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKACKMHGNVELAESFAQNL 494

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF--YPNCVTI 503
            K +    N +S+  L   Y   G+  +   +   +   C    P C +I
Sbjct: 495 IKIE--PENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSI 542


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 238/784 (30%), Positives = 390/784 (49%), Gaps = 81/784 (10%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           + K++Q+    G    GKL+HS +IK        ++N++L +Y KCG    A + F+ M 
Sbjct: 62  YVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKMS 121

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG---------------------- 257
           + + V +NS+ISGY Q+   D+   LFDK  R  +KL                       
Sbjct: 122 KSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKM 181

Query: 258 -------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFA 304
                        VV  N LI  Y++ GQ D A  +    + L    D  +W  +I+G+ 
Sbjct: 182 IHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKL----DGVSWNSLIAGYV 237

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT-DLKALAM-GMEIHSLAVKMGFTDD 362
           QNG+  + L + ++M   G+  N  T+ SA+ AC+ +     M G  +H  A+K+G   D
Sbjct: 238 QNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLD 297

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA----GYCG-KAYELF 417
           V+VG +L++MY+K   L+ A ++FD + DK+V  +N+M+AG  Q       C  KA  LF
Sbjct: 298 VVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLF 357

Query: 418 IKMQESDVPPNVITWNVLISGYI----------------QNGN-EDE-----AVDLFQRM 455
            +M+   + P++ T++ L+   I                +NG   DE      +DL+  +
Sbjct: 358 FEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVL 417

Query: 456 GK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           G         N           ++I GY Q G+  +AL +F ++ +    P+     +++
Sbjct: 418 GSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIM 477

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
            +CA +      ++I G   +  +       NS I  YAKSG++  +   F  M + DI+
Sbjct: 478 SSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIV 537

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
           +W+++IC    HG    AL  F+ MKS G++PN   FL +++A S  G+V+ G + F ++
Sbjct: 538 SWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTM 597

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
            + Y++   ++H   ++DL GR+G+L +A   I  +  E +  +W ALL+ACRIH +   
Sbjct: 598 EKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIHKDTVT 657

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
           A    +++ +LEP       L+  IY   G    A KVR L  E   +   G  WI++ +
Sbjct: 658 AQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSWIQIGD 717

Query: 748 LVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGI--HSEKLAL 805
            VY+FV+G  S   S  +Y+ L  +        S   +   + E E ++ +  HSEKLA+
Sbjct: 718 KVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKDILGYKIEHEHLTNVNYHSEKLAV 777

Query: 806 AFALIG-SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
           AF ++  S  AP  +R++KN+R+C+ CH T K  S++   E+ + DS   HHFK+G CSC
Sbjct: 778 AFGVLYLSESAP--VRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSVRFHHFKDGSCSC 835

Query: 865 GDYW 868
           GDYW
Sbjct: 836 GDYW 839



 Score =  177 bits (449), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 137/532 (25%), Positives = 237/532 (44%), Gaps = 89/532 (16%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNLVTEID--VFVKTKLLSVYAKCGCLDDAREVFEDM 117
           Y+ L+Q+   +  ++  + +H+ + + T     +F++  LL++Y KCG    A ++F+ M
Sbjct: 62  YVKLVQSATKTGKLNHGKLVHSHM-IKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKM 120

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            + N+ T++++I  Y +     +V+ LF    + GL  D +     L AC   G+  AGK
Sbjct: 121 SKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGK 180

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
           ++H L++  G+     + NS++ +Y KCG++ +AR  F+  D+ DGV+WNS+I+GY Q G
Sbjct: 181 MIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNG 240

Query: 238 ENDEAHRLFDKM-------------------------CR--------EEIKLG----VVT 260
           + +E   +  KM                         C+          IKLG    VV 
Sbjct: 241 KYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLGLHLDVVV 300

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTS-----QALDL 315
              L+  Y + G  D A+++  +M    +  +V  +  M++G  Q          +AL+L
Sbjct: 301 GTALLDMYAKTGSLDDAIQIFDQM----VDKNVVMYNAMMAGLLQQETIEDKCAYKALNL 356

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           F EM   G+ P+  T +S + AC  ++      ++H+L  K G   D  +G+ LI++YS 
Sbjct: 357 FFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSV 416

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
              +  A   F+ I +  +    +MI GY Q G    A  LF ++   +  P+    + +
Sbjct: 417 LGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTI 476

Query: 436 ISG-----------------------------------YIQNGNEDEAVDLFQRMGKNDK 460
           +S                                    Y ++G+   A   FQ+M   D 
Sbjct: 477 MSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDI 536

Query: 461 VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
           V     SW+++I    Q G    AL  F  M+S    PN    L VL AC++
Sbjct: 537 V-----SWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSH 583



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 156/350 (44%), Gaps = 51/350 (14%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-----LVTEI 89
           NG+  E +T+L  +   G      T  + L+AC  S++ +  +     L+     L   +
Sbjct: 239 NGKYEELLTILQKMHQNGLAFNTYTLGSALKAC--SSNFNGCKMFGTMLHDHAIKLGLHL 296

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR-----DQRWREVVEL 144
           DV V T LL +YAK G LDDA ++F+ M ++N+  ++AM+    +     D+   + + L
Sbjct: 297 DVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNL 356

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           FF M   G+ P  F +  +L+AC    DF+  K +H+L+ K G+     + + ++ +Y  
Sbjct: 357 FFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSV 416

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE----------- 253
            G ++ A   F S+     V   +MI GY Q GE + A  LF ++   E           
Sbjct: 417 LGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTI 476

Query: 254 --------------------IKLGVVTFNILIRS----YNQLGQCDVAMEMVKRMESLGI 289
                                K+G+  F I   S    Y + G    A    ++ME+   
Sbjct: 477 MSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMEN--- 533

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
            PD+ +W+ MI   AQ+G   +AL  F+ M   G+ PN       + AC+
Sbjct: 534 -PDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACS 582



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 132/286 (46%), Gaps = 6/286 (2%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTK 96
           +A+ +   + + G K    TY +LL+ACI       A+++HA +    L++  D ++ + 
Sbjct: 352 KALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLS--DEYIGSI 409

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+ +Y+  G + DA   F  +    +   +AMI  Y ++  +   + LF+ ++     PD
Sbjct: 410 LIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPD 469

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           +F+   I+ +C N G   +G+ +     K+G+S     +NS + +Y K G L  A   F+
Sbjct: 470 EFIXSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQ 529

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            M+  D V+W++MI    Q G   EA R F+ M    I+     F  ++ + +  G  + 
Sbjct: 530 QMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEE 589

Query: 277 AMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
            +     ME    +   V    C++    + GR + A  L   + F
Sbjct: 590 GLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGF 635



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 99/203 (48%), Gaps = 2/203 (0%)

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
           SS F    V  + ++ +       N  K +H  +++ S    L + N+L++ Y K G+  
Sbjct: 52  SSTFLLESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTR 111

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            +  +FD MS  +I+T+NSLI GYV        + LFD+ +  GLK ++ T    + A S
Sbjct: 112 SADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACS 171

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
            +G +  GK +   I   Y +   +   +++ID+Y + G+++ A   + D   + D   W
Sbjct: 172 QSGNLSAGKMIHGLIL-VYGLGSQVVLTNSLIDMYSKCGQVDYA-RILFDHSDKLDGVSW 229

Query: 673 EALLTACRIHGNIDLAVLAIERL 695
            +L+     +G  +  +  ++++
Sbjct: 230 NSLIAGYVQNGKYEELLTILQKM 252


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 258/911 (28%), Positives = 437/911 (47%), Gaps = 88/911 (9%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHL-ARKLHAFLNLVTEI-DVFV 93
           G   E++   + +   G K       +L+ AC  S  + +   ++H F+  V  + DVFV
Sbjct: 8   GSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGLLSDVFV 67

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +Y   G   DA +VF++M  +N+ +W+A++ AY        V+ ++  M  +G+
Sbjct: 68  GTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYRRMRSEGM 127

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             +D     ++  C +  +   G  +   VIK G+     V NS+++++   G +  A  
Sbjct: 128 SCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGSVEEACY 187

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR--------------------EE 253
            F  MDE D ++WNSMI+ Y + G   E+ R F  M R                    + 
Sbjct: 188 VFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDN 247

Query: 254 IKLG---------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
           +K G               V   N LI  Y+  G+C+ A  + + M    +  D+ +W  
Sbjct: 248 LKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGM----VEKDMISWNS 303

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           M++ +AQ+G    AL L   M ++    N VT TSA++AC+D +    G  +H+L + +G
Sbjct: 304 MMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVG 363

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
             ++V+VGN+L+ +Y+K   +  A++VF  +  +D  +WN++I G+  +    +A + F 
Sbjct: 364 LHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFK 423

Query: 419 KMQESDVPPNVIT------------------------------------WNVLISGYIQN 442
            M+E  VP N IT                                     N LI+ Y + 
Sbjct: 424 LMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKC 483

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G+ + + ++F R+       +N ++WN+++A     G    AL    +M+ +    +  +
Sbjct: 484 GDLNSSNNIFDRL-----TSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFS 538

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
               L A A L    + +++HG  ++   +S+  V ++ +D Y K G I     I     
Sbjct: 539 FSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPI 598

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
           ++  ++WN L   +  HGF+  A + F +M + G+KP+  TF+S++ A S  GMV+ G  
Sbjct: 599 NRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLA 658

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            + S+ + + I   I H   +IDL GRSG+  EA  FI++MP+ P   +W +LL AC+ H
Sbjct: 659 YYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTH 718

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
           GN++L   A+E L  L+P D     L   I A  GK ED  K+R+    N  +      W
Sbjct: 719 GNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKKKPACSW 778

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS-----SHSGLCIEEEEKEEISG 797
           +++KN +  F  G  S   +  +Y+ L+ + + +         S++    +EE+KE    
Sbjct: 779 VKLKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKEAGYIPDISYALQDTDEEQKEHNLW 838

Query: 798 IHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF 857
            HSE+LALA+ LI S +   T++I KN+R+C  CH   K+ S +   +I L D    H F
Sbjct: 839 NHSERLALAYGLISSPEGS-TLKIFKNLRVCGDCHSVYKFASGILGRKIVLRDPYRFHQF 897

Query: 858 KNGQCSCGDYW 868
             GQCSC DYW
Sbjct: 898 SGGQCSCTDYW 908



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 169/659 (25%), Positives = 278/659 (42%), Gaps = 93/659 (14%)

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG-DFEAGKLMHSLVIKLG 187
           +  + R   +RE +  F  M   G+ P       ++ AC         G  +H  ++K+G
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 188 MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
           +     V  S++ +Y   G    A + F+ M  K+ V+W +++  Y   GE      ++ 
Sbjct: 61  LLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMNIYR 120

Query: 248 KMCREE-------------------------------IKLGVVT----FNILIRSYNQLG 272
           +M  E                                IK G+ T     N LI  +   G
Sbjct: 121 RMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFG 180

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
             + A  +   M+      D  +W  MI+ + +NG   ++L  F  M  V    N  T++
Sbjct: 181 SVEEACYVFSGMDE----HDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLS 236

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           + ++ C  +  L  G  IHSL +K G+  +V   N+LI MYS     E AE VF  + +K
Sbjct: 237 TMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEK 296

Query: 393 DVYSWNSMIAGYCQAGYC---------------GKAYELFIKMQESDVPP---------- 427
           D+ SWNSM+A Y Q G C               G  Y  F     +   P          
Sbjct: 297 DMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILH 356

Query: 428 ----------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
                     NVI  N L++ Y ++G   EA  +FQ M K D V     +WN+LI G+  
Sbjct: 357 ALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGV-----TWNALIGGHAD 411

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE----IHGCVLRRSLES 533
             + + AL  F+ M+      N +TI +VL AC   +A N + E    IH  ++    +S
Sbjct: 412 SEEPDEALKAFKLMREEGVPINYITISNVLGAC---LAPNDLLEHGMPIHAFIILTGFQS 468

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
              V NSLI  YAK G++  S  IFD ++SK+   WN+++     HG    AL    +M+
Sbjct: 469 DEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMR 528

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVF-CSITECYQIIPMIEHYSAMIDLYGRSGK 652
             G+  +  +F   + A +   +++ G+++   ++       P +   SA +D+YG+ G+
Sbjct: 529 RAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVA--SATMDMYGKCGE 586

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL--EPGDVLIQRLI 709
           +++ +  I   PI      W  L ++   HG  + A      + +L  +P  V    L+
Sbjct: 587 IDDVLRIIPR-PINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLL 644



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 209/462 (45%), Gaps = 45/462 (9%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG   E++     +     ++   T   +L  C   +++   R +H+  L      +V  
Sbjct: 210 NGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCA 269

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+++Y+  G  +DA  VF+ M E+++ +W++M+  Y++D    + ++L   M     
Sbjct: 270 SNTLITMYSDAGRCEDAELVFQGMVEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRR 329

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             +   F   L AC +      GK++H+LVI +G+     V N+++ +Y K G +I A++
Sbjct: 330 GANYVTFTSALAACSDPEFATEGKILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKK 389

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F++M ++DGV WN++I G+    E DEA + F  M  E + +  +T +      N LG 
Sbjct: 390 VFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITIS------NVLGA 443

Query: 274 CDVAMEMVKRMESL-------GITPDVFTWTCMISGFAQ--------------------- 305
           C    ++++    +       G   D +    +I+ +A+                     
Sbjct: 444 CLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKCGDLNSSNNIFDRLTSKNASA 503

Query: 306 ----------NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
                     +G   +AL    EM   GV  +  + +  ++A   L  L  G ++H LAV
Sbjct: 504 WNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLHGLAV 563

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K+G   +  V ++ ++MY KC E++   R+     ++   SWN + + + + G+  KA E
Sbjct: 564 KLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFEKAKE 623

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
            F +M    V P+ +T+  L+S     G  +E +  +  M K
Sbjct: 624 TFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIK 665


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 215/621 (34%), Positives = 326/621 (52%), Gaps = 52/621 (8%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGM 348
           +PD   W  +++G +     S+AL+ F  M+  G V P+  T+ S + A  ++    MG 
Sbjct: 186 SPDTVLWNTLLAGLSG----SEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGR 241

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
            +H+   K G      V   LI++Y+KC ++E A  +FD ++  D+ ++N++I+GY   G
Sbjct: 242 CVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSING 301

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA-------------------- 448
             G + ELF ++    + P+  T   LI  +   G+E  A                    
Sbjct: 302 MVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVST 361

Query: 449 --VDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
               L+ R    D  +R           SWN++I+GY Q G    A+ +F++MQ+    P
Sbjct: 362 ALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRP 421

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           N +TI S L ACA L A +  K +H  +    LE ++ VM +LID Y K G+I  +R IF
Sbjct: 422 NPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIF 481

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           D M +K++++WN +I GY LHG    AL L+  M    L P   TFLS++ A S  G+V 
Sbjct: 482 DSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVK 541

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP-DSSIWEALLT 677
            G  VF S+T  Y I P IEH + M+DL GR+G+L+EA E I + P       IW ALL 
Sbjct: 542 EGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLG 601

Query: 678 ACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNS 737
           AC +H + DLA LA ++LF+LEP +     L+  +Y    +  +A  VR+  +      +
Sbjct: 602 ACMVHKDGDLAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKT 661

Query: 738 FGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IE 788
            G   IE+ +  + F+ G  +   SD +Y +L    E +TA+   +G           +E
Sbjct: 662 PGCTLIEIGDRPHVFMAGDRAHPQSDAIYLYL----EKLTAKMIEAGYRPDTEAALYDVE 717

Query: 789 EEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIF 847
           EEEKE +  +HSEKLA+AF L+ +   P T IRI+KN+R+C+ CH   K +S +    I 
Sbjct: 718 EEEKEHMVKVHSEKLAIAFGLLNTE--PGTEIRIIKNLRVCLDCHNATKIISKVTQRLIV 775

Query: 848 LADSKCLHHFKNGQCSCGDYW 868
           + D+   HHF++G CSCGDYW
Sbjct: 776 VRDASRFHHFRDGVCSCGDYW 796



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 202/457 (44%), Gaps = 39/457 (8%)

Query: 77  RKLHAFLNLVT--EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
           R LHA L + +    D FV + L  +Y      +DAR+VF+ +   +   W+ ++   S 
Sbjct: 143 RPLHA-LAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLS- 200

Query: 135 DQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR 193
                E +E F  M   G + PD      +L A     +   G+ +H+   K G++    
Sbjct: 201 ---GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEH 257

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
           V   ++++Y KCG +  AR  F+ M+  D V +N++ISGY   G    +  LF ++    
Sbjct: 258 VVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMG 317

Query: 254 IKLGVVTFNILIRSYNQLGQCDVA-------------------------------MEMVK 282
           ++    T   LI  ++  G   +A                               M+  +
Sbjct: 318 LRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSAR 377

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
           R         + +W  MISG+AQNG T  A+ LF++M  + V PN +TI+SA+SAC  L 
Sbjct: 378 RAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLG 437

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           AL++G  +H +        +V V  +LI+MY KC  +  A  +FD + +K+V SWN MI+
Sbjct: 438 ALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMIS 497

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
           GY   G   +A +L+  M ++ + P   T+  ++      G   E   +F+ M  +  + 
Sbjct: 498 GYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGIT 557

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
                   ++    + GQ   A  +  +   S   P 
Sbjct: 558 PGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPG 594



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 204/483 (42%), Gaps = 93/483 (19%)

Query: 131 AYSRDQRW--REVVELFFLMVQDGLFP--DDFLFP----KILQACGNCG------DFEAG 176
           A+ R  R+    ++     +  D LFP  D F F      +  +C   G         A 
Sbjct: 83  AFPRPDRFLRNSLLRSLPTLRADLLFPSPDSFSFAFAATSLASSCSRGGISPPSAASAAL 142

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           + +H+L +  G +    V +++  +Y    +   AR+ F+++   D V WN++++G    
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGL--- 199

Query: 237 GENDEAHRLFDKMC------REEIKLGVV------------------------------T 260
               EA   F +M        +   L  V                               
Sbjct: 200 -SGSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHV 258

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
              LI  Y + G  + A  +  RME     PD+ T+  +ISG++ NG    +++LFKE+ 
Sbjct: 259 VTGLISLYAKCGDMECARHLFDRMEG----PDLVTYNALISGYSINGMVGSSVELFKELV 314

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
            +G+ P+  T+ + I   +      +   +H+  VK G   +  V  +L  +Y +  +++
Sbjct: 315 GMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMD 374

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
           +A R FD + +K + SWN+MI+GY Q G    A  LF +MQ  +V PN +T +  +S   
Sbjct: 375 SARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACA 434

Query: 441 QNG-------------NED---------EAVDLFQRMGKNDKVK--------RNTASWNS 470
           Q G             NE            +D++ + G   + +        +N  SWN 
Sbjct: 435 QLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNV 494

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +I+GY   GQ   AL +++ M  +  +P   T LSVL AC++      VKE  G  + RS
Sbjct: 495 MISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSH---GGLVKE--GTTVFRS 549

Query: 531 LES 533
           + S
Sbjct: 550 MTS 552



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 135/295 (45%), Gaps = 2/295 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG +  ++ +   +   G +   +T + L+          LA  LHA  +    + +  V
Sbjct: 300 NGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPV 359

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L ++Y +   +D AR  F+ M E+ + +W+AMI  Y+++      V LF  M    +
Sbjct: 360 STALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNV 419

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+       L AC   G    GK +H ++    +     V  +++ +YVKCG +  AR 
Sbjct: 420 RPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARC 479

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+SMD K+ V+WN MISGY   G+  EA +L+  M    +     TF  ++ + +  G 
Sbjct: 480 IFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGL 539

Query: 274 CDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
                 + + M S  GITP +   TCM+    + G+  +A +L  E     V P 
Sbjct: 540 VKEGTTVFRSMTSDYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPG 594



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 185/428 (43%), Gaps = 87/428 (20%)

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
            G++  SA SA   L+ L      H+LAV  GF  D  V ++L  +Y        A +VF
Sbjct: 130 GGISPPSAASAA--LRPL------HALAVASGFAADNFVASALAKLYFTLSRGNDARKVF 181

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES-DVPPNVITW------------- 432
           D +   D   WN+++AG   +    +A E F++M  +  V P+  T              
Sbjct: 182 DAVPSPDTVLWNTLLAGLSGS----EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANT 237

Query: 433 ----------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
                                   LIS Y + G+ + A  LF RM   D V     ++N+
Sbjct: 238 TMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLV-----TYNA 292

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           LI+GY   G   +++ +F+++      P+  T+++++P  +          +H  V++  
Sbjct: 293 LISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAG 352

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           L+++ PV  +L   Y +  ++  +R  FD M  K + +WN++I GY  +G    A+ LF 
Sbjct: 353 LDANAPVSTALTTLYCRFNDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQ 412

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT------ECYQIIPMIEHY---- 640
           QM++  ++PN  T  S + A +  G + LGK V   I         Y +  +I+ Y    
Sbjct: 413 QMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCG 472

Query: 641 --------------------SAMIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLT 677
                               + MI  YG  G+  EA++  +DM    + P SS + ++L 
Sbjct: 473 SIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLY 532

Query: 678 ACRIHGNI 685
           AC  HG +
Sbjct: 533 ACS-HGGL 539



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 126/506 (24%), Positives = 210/506 (41%), Gaps = 81/506 (16%)

Query: 39  NEAITVLDSIATQGA-KVRRNTYINLLQACIDSNSIHLARKLHAF---LNLVTEIDVFVK 94
           +EA+     +A  G+ +    T  ++L A  +  +  + R +HAF     L     V   
Sbjct: 202 SEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVV-- 259

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T L+S+YAKCG ++ AR +F+ M   +L T++A+I  YS +      VELF  +V  GL 
Sbjct: 260 TGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLR 319

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P       ++      G       +H+ V+K G+     V  ++  +Y +   +  ARR 
Sbjct: 320 PSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRA 379

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------------- 249
           F++M EK   +WN+MISGY Q G  + A  LF +M                         
Sbjct: 380 FDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGAL 439

Query: 250 ----------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                       E+++L V     LI  Y + G    A  +   M++     +V +W  M
Sbjct: 440 SLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDN----KNVVSWNVM 495

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           ISG+  +G+ ++AL L+K+M    + P   T  S + AC+           H   VK G 
Sbjct: 496 ISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACS-----------HGGLVKEGT 544

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
           T    V  S+ + Y     +E    + D++                +AG   +A+EL  +
Sbjct: 545 T----VFRSMTSDYGITPGIEHCTCMVDLLG---------------RAGQLKEAFELISE 585

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
             +S V P +  W  L+   + + + D A    Q++ + +    NT  +  L   Y    
Sbjct: 586 FPKSAVGPGI--WGALLGACMVHKDGDLAKLASQKLFELE--PENTGYYVLLSNLYTSKK 641

Query: 480 QKNNALGVFRKMQSSCFY--PNCVTI 503
           Q + A  V ++ +S      P C  I
Sbjct: 642 QYSEAAVVRQEAKSRKLVKTPGCTLI 667


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 223/741 (30%), Positives = 370/741 (49%), Gaps = 87/741 (11%)

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV--KCGKLIWARRFFESMDEKDGVAWN 227
           C   +  + +H   IK G++    ++N V+      + G   +ARR F+ + E +   WN
Sbjct: 28  CESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWN 87

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES- 286
           +MI GY ++        L+ +M R  +K    TF  L + + +    D+A+E  +++   
Sbjct: 88  TMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR----DIALEYGRQLHGH 143

Query: 287 --------------------------------LGITP--DVFTWTCMISGFAQNGRTSQA 312
                                             + P  DV TW  +IS + + G+  ++
Sbjct: 144 VLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEES 203

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
             LF  M    V+P  VT+   +SAC+ LK L  G ++HS         ++++ N++I+M
Sbjct: 204 RRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDM 263

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y+ C E+++                               A  +F  M   D+    I+W
Sbjct: 264 YADCGEMDS-------------------------------ALGIFRSMNNRDI----ISW 288

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
             ++SG+   G  D A + F +M + D V     SW ++I GY +  +   AL +FR MQ
Sbjct: 289 TTIVSGFTNLGEIDVARNYFDKMPEKDYV-----SWTAMIDGYIRSNRFKEALELFRNMQ 343

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
           ++   P+  T++SVL ACA+L A    + I   + R  +++ L V N+LID Y K G++ 
Sbjct: 344 ATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVD 403

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            + +IF  MS +D  TW ++I G  ++G    ALD+F  M    + P+  T++ ++ A +
Sbjct: 404 KAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACT 463

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
             G+VD G+K F  +T  + I P I HY  ++DL  R+G+L+EA E IE+MPI+ +S +W
Sbjct: 464 HTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVW 523

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
            ALL  CR++   D+A + ++++ +LEP +  +  L+  IYA C +  D  ++R++  + 
Sbjct: 524 GALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDK 583

Query: 733 TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCI 787
             + + G   IE+   V+ FV G  S   +  + + L  + +++     +   S   L I
Sbjct: 584 GIKKTPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDI 643

Query: 788 EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIF 847
            EE+KE     HSEKLA+AF LI S     TIRI KN+RMC+ CH  AK VS +++ E+ 
Sbjct: 644 AEEDKENSVFRHSEKLAIAFGLINSPPGV-TIRITKNLRMCMDCHNMAKLVSKVYNREVI 702

Query: 848 LADSKCLHHFKNGQCSCGDYW 868
           + D    HHFK+G CSC DYW
Sbjct: 703 VRDRTRFHHFKHGLCSCKDYW 723



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 208/442 (47%), Gaps = 40/442 (9%)

Query: 51  QGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDD 109
           +G K  R T+  L +      ++   R+LH   L    + +VFV T L+ +Y  CG LD 
Sbjct: 112 RGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDT 171

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           AR VF+   + ++ TW+ +I AY++  ++ E   LF +M    + P       +L AC  
Sbjct: 172 ARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSK 231

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
             D   GK +HS V    +     + N+++ +Y  CG++  A   F SM+ +D ++W ++
Sbjct: 232 LKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTI 291

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           +SG+  +GE D A   FDKM  ++     V++  +I  Y +  +   A+E+ + M++  +
Sbjct: 292 VSGFTNLGEIDVARNYFDKMPEKD----YVSWTAMIDGYIRSNRFKEALELFRNMQATNV 347

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            PD F                                   T+ S ++AC  L AL +G  
Sbjct: 348 KPDEF-----------------------------------TMVSVLTACAHLGALELGEW 372

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           I +   +    +D+ V N+LI+MY KC +++ AE +F  +  +D ++W +MI G    G+
Sbjct: 373 IRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGH 432

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
             KA ++F  M ++ + P+ IT+  ++S     G  D+    F RM     ++ N A + 
Sbjct: 433 GEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYG 492

Query: 470 SLIAGYQQLGQKNNALGVFRKM 491
            L+    + G+   A  V   M
Sbjct: 493 CLVDLLARAGRLKEAYEVIENM 514



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 113/234 (48%), Gaps = 3/234 (1%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL-VT 87
           +D    + R  EA+ +  ++     K    T +++L AC    ++ L   +  +++    
Sbjct: 323 IDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKI 382

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + D+FV+  L+ +Y KCG +D A  +F +M +R+ +TW+AMI   + +    + +++F  
Sbjct: 383 KNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSN 442

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M++  + PD+  +  +L AC + G  + G K    +  + G+         ++ +  + G
Sbjct: 443 MLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAG 502

Query: 207 KLIWARRFFESMDEK-DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
           +L  A    E+M  K + + W ++++G     E+D A  +  ++   E   G V
Sbjct: 503 RLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAV 556


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 243/813 (29%), Positives = 378/813 (46%), Gaps = 160/813 (19%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M++ G   D F  P +L+ACG    +  G   H      G+ C     ++V         
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFH------GLICCNGFESNVFIC------ 48

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
                              N++++ Y + G  +EA  +FD++ +  I             
Sbjct: 49  -------------------NALVAMYSRCGSLEEASMIFDEITQRGID------------ 77

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF-VGVMP 326
                                   DV +W  ++S   ++     ALDLF +M+  V   P
Sbjct: 78  ------------------------DVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKP 113

Query: 327 NG-----VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
                  ++I + + AC  LKA+    E+H  A++ G   DV VGN+LI+ Y+KC  +E 
Sbjct: 114 TNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMEN 173

Query: 382 AERVFDMIKDKDVYSWNSM-----------------------------------IAGYCQ 406
           A +VF+M++ KDV SWN+M                                   IAGY Q
Sbjct: 174 AVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQ 233

Query: 407 AGYCGKAYELFIKMQESDVPPNVITW-------------------------NVLISGYIQ 441
            G   +A  +F +M  S   PN +T                          N L++    
Sbjct: 234 RGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDND 293

Query: 442 NGNEDE-------AVDLFQRMGKNDKVK----------RNTASWNSLIAGYQQLGQKNNA 484
            G EDE        +D++ +       +          RN  +W  +I G+ Q G  N+A
Sbjct: 294 FGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDA 353

Query: 485 LGVFRKMQSSCF--YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL--ESSLPVMNS 540
           L +F +M S  +   PN  TI  +L ACA+L A    K+IH  VLR      S+  V N 
Sbjct: 354 LKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANC 413

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           LI+ Y+K G++  +R +FD MS K  I+W S++ GY +HG    ALD+FD+M+  G  P+
Sbjct: 414 LINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 473

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
             TFL ++ A S  GMVD G   F S++  Y + P  EHY+  IDL  R G+L++A + +
Sbjct: 474 DITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTV 533

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
           +DMP+EP + +W ALL+ACR+H N++LA  A+ +L ++   +     LI  IYA  G+ +
Sbjct: 534 KDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWK 593

Query: 721 DALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA-- 778
           D  ++R L +++  +   G  W++ +    +F  G  S   S  +Y+ L+++ + + A  
Sbjct: 594 DVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMG 653

Query: 779 ---RSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETA 835
               ++ +   ++EEEK  +   HSEKLALA+ L+ +      IRI KN+R+C  CH   
Sbjct: 654 YVPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGC-PIRITKNLRVCGDCHSAF 712

Query: 836 KYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            Y+S +   EI + D    HHFKNG CSCG YW
Sbjct: 713 TYISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 745



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 236/522 (45%), Gaps = 101/522 (19%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDA 110
           G ++   T  ++L+AC +  S       H  +     E +VF+   L+++Y++CG L++A
Sbjct: 5   GTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 64

Query: 111 REVFEDMRER---NLYTWSAMIGAYSRDQRWREVVELFFLMV------QDGLFPDDFLFP 161
             +F+++ +R   ++ +W++++ A+ +       ++LF  M             D     
Sbjct: 65  SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 124

Query: 162 KILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK 221
            IL ACG+       K +H   I+ G      V N+++  Y KCG +  A + F  M+ K
Sbjct: 125 NILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 184

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMV 281
           D V+WN+M++GY Q G    A  LF  M +E I L +VT+  +I  Y+Q G    A+ + 
Sbjct: 185 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 244

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
           ++M   G  P+  T                                   I S +SAC  L
Sbjct: 245 RQMIFSGSLPNCVT-----------------------------------IISVLSACASL 269

Query: 342 KALAMGMEIHSLAVKM----------GFTDDVLVGNSLINMYSKCEELEAAERVFDMI-- 389
            A + GMEIH+ ++K           G  +D++V N+LI+MYSKC   +AA  +FD I  
Sbjct: 270 GAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPL 329

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKM--QESDVPPNVIT---------------- 431
           ++++V +W  MI G+ Q G    A +LF++M  +   V PN  T                
Sbjct: 330 EERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRI 389

Query: 432 ---------------------WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
                                 N LI+ Y + G+ D A  +F  M +   +     SW S
Sbjct: 390 GKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAI-----SWTS 444

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
           ++ GY   G+ + AL +F KM+ + F P+ +T L VL AC++
Sbjct: 445 MMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSH 486



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 154/321 (47%), Gaps = 21/321 (6%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF------LNLVTEI 89
           G  +EA+ V   +   G+     T I++L AC    +     ++HA+      L L  + 
Sbjct: 235 GCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDF 294

Query: 90  -----DVFVKTKLLSVYAKCGCLDDAREVFED--MRERNLYTWSAMIGAYSRDQRWREVV 142
                D+ V   L+ +Y+KC     AR +F+D  + ERN+ TW+ MIG +++     + +
Sbjct: 295 GGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDAL 354

Query: 143 ELFFLMVQD--GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM--SCVRRVRNSV 198
           +LF  M+ +  G+ P+ +    IL AC +      GK +H+ V++     S    V N +
Sbjct: 355 KLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCL 414

Query: 199 LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV 258
           + +Y KCG +  AR  F+SM +K  ++W SM++GY   G   EA  +FDKM +       
Sbjct: 415 INMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDD 474

Query: 259 VTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           +TF +++ + +  G  D  +     M +  G+TP    +   I   A+ GR  +A    K
Sbjct: 475 ITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVK 534

Query: 318 EMSFVGVMPNGVTITSAISAC 338
           +M    + P  V   + +SAC
Sbjct: 535 DMP---MEPTAVVWVALLSAC 552


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 237/795 (29%), Positives = 379/795 (47%), Gaps = 90/795 (11%)

Query: 151 DGLFP--DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           D + P  D   +  +L+ C    D  + K +H  ++K G        N +L  YVK G  
Sbjct: 41  DSVVPCLDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD 100

Query: 209 IWARRFFESMDEKDGVAWNSMISGYF---QIGENDEAHR---------------LFDKMC 250
             A   F+ M E++ V++ ++  GY     +G     HR               LF  + 
Sbjct: 101 KDALNLFDEMPERNNVSYVTLTQGYACQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLD 160

Query: 251 REEI---------KLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
           + EI         KLG          LI +Y+  G  D A  + + +    +  D+  W 
Sbjct: 161 KAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGI----LCKDIVVWA 216

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            ++S + +NG    +L L   M   G MPN  T  +A+ A   L A      +H   +K 
Sbjct: 217 GIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKT 276

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            +  D  VG  L+ +Y++  ++  A +VF+ +   DV  W+ MIA +CQ G+C KA ++F
Sbjct: 277 CYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIF 336

Query: 418 IKMQESDVPPNVITWNVLISG--------------------------YIQNG-------- 443
           I+M+E  V PN  T + +++G                          Y+ N         
Sbjct: 337 IRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKC 396

Query: 444 -NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
              D AV LF  +       +N  SWN++I GY+ LG+   AL +FR+   +      VT
Sbjct: 397 EKMDTAVKLFAELS-----SKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVT 451

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
             S L ACA L +     ++HG  ++ +    + V NSLID YAK G+I  ++T+F+ M 
Sbjct: 452 FSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEME 511

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
           + D+ +WN+LI GY  HG    AL +FD MK    KPN  TFL ++   S AG++D G+ 
Sbjct: 512 TIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQD 571

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F S+   + I P +EHY+ M+ L+GRSG+L++AM  IE +P EP   IW A+L+A    
Sbjct: 572 CFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQ 631

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
            N + A  + E +  + P D     L+  +YA   +  +   +RK  +E   +   G  W
Sbjct: 632 YNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSW 691

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSG---------LCIEEEEKE 793
           IE +  V+ F  G  S  + D+    +  + E +  +++ +G         L +++EEK+
Sbjct: 692 IEHQGDVHFFSVG--SSDHPDM--KLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKD 747

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
           +   +HSE+LALA+ L+    + + I I+KN+R+C  CH   K +S +   ++ + D   
Sbjct: 748 KRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNR 807

Query: 854 LHHFKNGQCSCGDYW 868
            HHF  G CSC D+W
Sbjct: 808 FHHFHAGVCSCDDHW 822



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 151/584 (25%), Positives = 266/584 (45%), Gaps = 76/584 (13%)

Query: 58  NTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           + Y  +L+ CI  N    A+ +H   L   + +D+F    LL+ Y K G   DA  +F++
Sbjct: 50  HAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDE 109

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M ERN  ++  +   Y+     ++ V L+  + ++G   +  +F   L+   +    E  
Sbjct: 110 MPERNNVSYVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEIC 165

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
             +HS ++KLG      V  +++  Y  CG +  AR  FE +  KD V W  ++S Y + 
Sbjct: 166 WWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVEN 225

Query: 237 GENDEAHRL---------------FDKMCREEIKLGVVTFNI------------------ 263
           G  +++ +L               FD   +  I LG   F                    
Sbjct: 226 GCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVG 285

Query: 264 --LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
             L++ Y QLG    A ++   M       DV  W+ MI+ F QNG  ++A+D+F  M  
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPK----NDVVPWSFMIARFCQNGFCNKAVDIFIRMRE 341

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
             V+PN  T++S ++ C   K   +G ++H L VK+GF  DV V N+LI++Y+KCE+++ 
Sbjct: 342 GFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDT 401

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN-------- 433
           A ++F  +  K+V SWN++I GY   G  GKA  +F +   + V    +T++        
Sbjct: 402 AVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACAS 461

Query: 434 -------VLISGY-IQNGN------EDEAVDLFQRMGK--------NDKVKRNTASWNSL 471
                  V + G  I+  N       +  +D++ + G         N+    + ASWN+L
Sbjct: 462 LASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNAL 521

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE-IHGCVLRRS 530
           I+GY   G    AL +F  M+ S   PN +T L VL  C+     ++ ++     +    
Sbjct: 522 ISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHG 581

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLI 573
           +E  L     ++  + +SG +  +  + +G+     ++ W +++
Sbjct: 582 IEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAML 625


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 265/910 (29%), Positives = 436/910 (47%), Gaps = 104/910 (11%)

Query: 52   GAKVRRNTYINLLQACIDS--NSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKC--GC 106
            G +    T+  LL+AC D   + +  A ++H  ++      +  V   L+S+Y  C  G 
Sbjct: 160  GCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGP 219

Query: 107  LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG-----LFPDDFLFP 161
               A+ VF+    R+L TW+A++  Y++         LF  M Q G     L P +  F 
Sbjct: 220  PILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDM-QRGDSRIQLRPTEHTFG 278

Query: 162  KILQACGNCGDFEAGKLMHSL---VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
             ++ A        +  ++  +   V+K G S    V +++++ + + G    A+  F S+
Sbjct: 279  SLITAASL--SSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSL 336

Query: 219  DEKDGVAWNSMISGYFQIGENDEAHRLFD-----------------------KMCREEIK 255
             +K+ V  N +I G  +   ++EA ++F                         +  E ++
Sbjct: 337  KQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEEGLR 396

Query: 256  LGVVTFNILIRS-------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
            +G V    ++R+              N   +C  A+E   ++  L    D  +W  +IS 
Sbjct: 397  IGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCG-AIESASKIFQLMEATDRISWNTIISA 455

Query: 303  FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
              QNG   +A+  +  M    + P+   + S++S+C  LK L  G ++H  AVK G   D
Sbjct: 456  LDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLD 515

Query: 363  VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY-CGKAYELFIKMQ 421
              V N L+ MY +C  +    +VF+ + + D  SWN+M+     +     +  ++F  M 
Sbjct: 516  TSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMM 575

Query: 422  ESDVPPNVITW-----------------------------------NVLISGYIQNGNED 446
               + PN +T+                                   N LIS Y ++G+  
Sbjct: 576  RGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMG 635

Query: 447  EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
                LF  M      +R+  SWNS+I+GY   G    A+     M  S    +C T   +
Sbjct: 636  SCEHLFTNMSD----RRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSII 691

Query: 507  LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
            L ACA + A  +  E+H   +R  LES + V ++L+D Y+K G + Y+  +F+ M+ ++ 
Sbjct: 692  LNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNE 751

Query: 567  ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
             +WNS+I GY  HG    A+++F++M      P+  TF+S++ A S AG+V+ G + F  
Sbjct: 752  FSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEM 811

Query: 627  ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH---G 683
            + + + I+P IEHYS +IDL GR+GK+++  E+I+ MPIEP++ IW  +L ACR      
Sbjct: 812  MPD-HGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGS 870

Query: 684  NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
            NIDL   A   L ++EP + +   L    +A  G  ED  K R   R+ T +   G+ W+
Sbjct: 871  NIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWV 930

Query: 744  EVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGI 798
             + + V+TF+ G  S   +  +Y  L  + +N+        + ++   +EEE KEE+   
Sbjct: 931  TLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNIRNAGYVPLTEYALYDLEEENKEELLSY 990

Query: 799  HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
            HSEKLA+AF L  SS  P  IRI+KN+R+C  CH   +Y+S M   +I L DS   HHFK
Sbjct: 991  HSEKLAIAFVLTRSSSGP--IRIMKNLRVCGDCHIAFRYISQMISRQIILRDSIRFHHFK 1048

Query: 859  NGQCSCGDYW 868
            +G+CSCGDYW
Sbjct: 1049 DGKCSCGDYW 1058



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 185/732 (25%), Positives = 327/732 (44%), Gaps = 136/732 (18%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM- 148
           D+F+   L++ YAK   L  A +VF++M ERN  +W+ ++  Y       E   +F  M 
Sbjct: 95  DLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAML 154

Query: 149 --VQDGLFPDDFLFPKILQACGNCGDFEAG--KLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
             VQ G  P  F F  +L+AC + G    G    +H LV K   +    V N+++++Y  
Sbjct: 155 REVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGS 214

Query: 205 C--GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV--- 259
           C  G  I A+R F+    +D + WN+++S Y + G+      LF  M R + ++ +    
Sbjct: 215 CTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTE 274

Query: 260 -TFNILIRSYNQLGQCDVAME--MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 316
            TF  LI + +        ++  +V  ++S G + D++  + ++S FA++G T +A D+F
Sbjct: 275 HTFGSLITAASLSSGSSAVLDQVLVWVLKS-GCSSDLYVGSALVSAFARHGLTDEAKDIF 333

Query: 317 KEMS--------------------------FVG----VMPNGVTITSAISACTDL----K 342
             +                           FVG    V  N  T    +SA  +     +
Sbjct: 334 LSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEE 393

Query: 343 ALAMGMEIHSLAVKMGFTD-DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
            L +G  +H   ++ G TD  + V N L+NMY+KC  +E+A ++F +++  D  SWN++I
Sbjct: 394 GLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTII 453

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPP--------------------------NVITW--- 432
           +   Q G C +A   +  M++S + P                          + + W   
Sbjct: 454 SALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLD 513

Query: 433 ------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK--NNA 484
                 NVL+  Y + G   +   +F  M ++D+V     SWN+++ G     Q   +  
Sbjct: 514 LDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEV-----SWNTMM-GVMASSQTPISEI 567

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           + VF  M      PN VT +++L A + L      K++H  V++  +     V N+LI  
Sbjct: 568 VKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISC 627

Query: 545 YAKSGNIVYSRTIFDGMSS-KDIITWNSLICGYVLHGFWHAALD----------LFD--- 590
           YAKSG++     +F  MS  +D I+WNS+I GY+ +G    A+D          + D   
Sbjct: 628 YAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCT 687

Query: 591 ------------------QMKSFGLKPNRGTFL----SIILAHSLAGMVDLGKKVFCSIT 628
                             ++ +FG++ +  + +    +++  +S  G VD   K+F S+T
Sbjct: 688 FSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMT 747

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLTACRIHGNI 685
           +  +       +++MI  Y R G   +A+E  E+M      PD   + ++L+AC   G +
Sbjct: 748 QRNEF-----SWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLV 802

Query: 686 DLAVLAIERLFD 697
           +  +   E + D
Sbjct: 803 ERGLEYFEMMPD 814



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 166/747 (22%), Positives = 322/747 (43%), Gaps = 152/747 (20%)

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
           GD  + + +H  +IK G++    + N ++  Y K  +L  A + F+ M E++ V+W  ++
Sbjct: 75  GDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLV 134

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGV----VTFNILIRS------------------- 267
           SGY   G  +EA R+F  M R E++ G      TF  L+R+                   
Sbjct: 135 SGYVLHGIAEEAFRVFRAMLR-EVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLV 193

Query: 268 ---------------YNQLGQCDVAMEMVKRMESLGITP--DVFTWTCMISGFAQNGRTS 310
                           +  G C V   ++ +    G TP  D+ TW  ++S +A+ G  +
Sbjct: 194 SKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDG-TPIRDLITWNALMSVYAKKGDVA 252

Query: 311 QALDLFKEM----SFVGVMPNGVTITSAISACTDLKALAMGM-EIHSLAVKMGFTDDVLV 365
               LFK+M    S + + P   T  S I+A +     +  + ++    +K G + D+ V
Sbjct: 253 STFTLFKDMQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYV 312

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
           G++L++ +++    + A+ +F  +K K+  + N +I G  +  +  +A ++F+  + + V
Sbjct: 313 GSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNT-V 371

Query: 426 PPNVITWNVLISG----------------------------------------YIQNGNE 445
             N  T+ VL+S                                         Y + G  
Sbjct: 372 DVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAI 431

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           + A  +FQ M   D++     SWN++I+   Q G    A+  +  M+ SC  P+   ++S
Sbjct: 432 ESASKIFQLMEATDRI-----SWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALIS 486

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
            L +CA L      +++H   ++  L+    V N L+  Y + G +     +F+ M+  D
Sbjct: 487 SLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHD 546

Query: 566 IITWNSLICGYVLHGFWHAA--LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
            ++WN+++ G +       +  + +F+ M   GL PN+ TF++++ A S   +++LGK+V
Sbjct: 547 EVSWNTMM-GVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQV 605

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
             ++ + + ++      +A+I  Y +SG +        +M    D+  W ++++    +G
Sbjct: 606 HAAVMK-HGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNG 664

Query: 684 NIDLA----------------------------VLAIERLFDLEP--------GDVLIQR 707
           N+  A                            V A+ER  +L           DV+++ 
Sbjct: 665 NLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVES 724

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS----ESYSD 763
            ++ +Y+ CG+ + A    KL    T+RN F   W    +++  +   G      E + +
Sbjct: 725 ALVDMYSKCGRVDYA---SKLFNSMTQRNEFS--W---NSMISGYARHGLGRKAIEIFEE 776

Query: 764 LLYSWLQNVPENVTARS-----SHSGL 785
           +L S  +  P++VT  S     SH+GL
Sbjct: 777 MLRS--RESPDHVTFVSVLSACSHAGL 801



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 156/308 (50%), Gaps = 7/308 (2%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVFVKT 95
           ++E + V +++   G    + T+INLL A    + + L +++HA +  + V E D  V  
Sbjct: 564 ISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVME-DNVVDN 622

Query: 96  KLLSVYAKCGCLDDAREVFEDMRER-NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
            L+S YAK G +     +F +M +R +  +W++MI  Y  +   +E ++  +LM+  G  
Sbjct: 623 ALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQI 682

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            D   F  IL AC +    E G  +H+  I+  +     V ++++ +Y KCG++ +A + 
Sbjct: 683 MDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKL 742

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F SM +++  +WNSMISGY + G   +A  +F++M R       VTF  ++ + +  G  
Sbjct: 743 FNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLV 802

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
           +  +E  + M   GI P +  ++C+I    + G+  +  +  + M    + PN +   + 
Sbjct: 803 ERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMP---IEPNALIWRTV 859

Query: 335 ISACTDLK 342
           + AC   K
Sbjct: 860 LVACRQSK 867



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 2/198 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG L EA+  +  +   G  +   T+  +L AC    ++    +LHAF +    E DV V
Sbjct: 663 NGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVV 722

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           ++ L+ +Y+KCG +D A ++F  M +RN ++W++MI  Y+R    R+ +E+F  M++   
Sbjct: 723 ESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRE 782

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD   F  +L AC + G  E G     ++   G+       + V+ +  + GK+   + 
Sbjct: 783 SPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKE 842

Query: 214 FFESMD-EKDGVAWNSMI 230
           + + M  E + + W +++
Sbjct: 843 YIQRMPIEPNALIWRTVL 860


>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 741

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 229/698 (32%), Positives = 365/698 (52%), Gaps = 59/698 (8%)

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           +TE ++     ++S YAK G + +ARE+F+ M +RNL +W++MI  Y  ++   +   LF
Sbjct: 41  MTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLF 100

Query: 146 FLMVQDGLFPDDFLFPKILQAC-GNCGDFE-AGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
                D +F  D     ++  C    G+ E A +L + L  K    C    RN+++A Y 
Sbjct: 101 -----DRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVC----RNALIAGYA 151

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           K      A++ F+ M  K+ V+WNS++SGY + G+     + F+ M        VV++N+
Sbjct: 152 KKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGER----NVVSWNL 207

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM---- 319
           ++  Y  +G  D A    K++     TP+V +W  M+SGFA  GR ++A +LF EM    
Sbjct: 208 MVDGYVGVGDLDSAWMFFKKIP----TPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKN 263

Query: 320 -----SFVGV----------------MP--NGVTITSAISACTDLKALAMGMEIHSLAVK 356
                + +G                 MP  + V+ T+ I+    +  L    EI +L   
Sbjct: 264 LVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNL--- 320

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
           M +  ++    ++IN Y +   ++ A  +F  I  +D   WNSMI GY   G   +A  L
Sbjct: 321 MPY-KNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRL 379

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F +M    V  ++++WN +I+ Y Q G  D+A+++F     N+  +RN  SWNSLI GY 
Sbjct: 380 FQEM----VCKDMVSWNTMIAAYAQAGQMDKALEMF-----NEMQERNVVSWNSLITGYV 430

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           Q G    AL  F  M+     P+  TI+  L A A L A N   ++H   ++    + L 
Sbjct: 431 QNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLF 490

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           V N+++  YAKSG +  +  +F  + +KD+++WNSLI GY L+G    A++LF+ M   G
Sbjct: 491 VKNAILTMYAKSGRVPEAENVFAEIKNKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRG 550

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           + P+  TF  ++ A +  G VD G  +F S+TE Y I P  EHY+ +I+L GR G+LEEA
Sbjct: 551 IIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEA 610

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
           +E ++ M     + IW ALL ACRIH N++LA  + ERL  LEP +     L+  ++A  
Sbjct: 611 VEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEA 670

Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           G+ +   +VR L +EN      G  WIE+ N ++ F++
Sbjct: 671 GRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLHCFLS 708


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 208/645 (32%), Positives = 335/645 (51%), Gaps = 68/645 (10%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P    W  +I  +  +G   Q+L  F  M   G+ P+     S + +C  L  L +G  +
Sbjct: 69  PPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESL 128

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER-------------------------- 384
           H   +++G   D+  GN+L+NMYSK   LE + R                          
Sbjct: 129 HGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLS 188

Query: 385 ------VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
                 +F+M+ +KD+ SWN++IAG  + G   +   +  +M  +++ P+  T + ++  
Sbjct: 189 EDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPL 248

Query: 439 YIQN-----GNE-----------------DEAVDLF---QRMGKNDKV-----KRNTASW 468
             +N     G E                    +D++    R+  + +V     +R+  SW
Sbjct: 249 IAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISW 308

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           NS+IAG  Q G  +  L  FR+M  +   P   +  S++PACA+L   +  K++HG + R
Sbjct: 309 NSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 368

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
              + ++ + +SL+D YAK GNI  ++ IFD M  +D+++W ++I G  LHG    A++L
Sbjct: 369 NGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIEL 428

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F+QM++ G+KPN   F++++ A S  G+VD   K F S+T  + I P +EHY+A+ DL G
Sbjct: 429 FEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLG 488

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+G+LEEA +FI  M I P  SIW  LL+ACR+H NID+A     R+ +++P +     L
Sbjct: 489 RAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYIL 548

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  IY+   + ++A K R   R    R +    WIEVKN VY F+ G  S    + +   
Sbjct: 549 LANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREA 608

Query: 769 LQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
           ++ +      E     +S     +EEE+K+ +   HSE+LA+ F +I ++ A  TIR+ K
Sbjct: 609 MEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGII-NTPAGMTIRVTK 667

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+R+C  CH   K++S +   EI + D+   HHFKNG CSCGDYW
Sbjct: 668 NLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/459 (23%), Positives = 205/459 (44%), Gaps = 63/459 (13%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           LL+  +   S   A++LHA +       +   + LLS+Y+    L D+  +F  +     
Sbjct: 12  LLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPA 71

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
             W ++I  Y+      + +  F  M+  GL+PD  +FP +L++C    D   G+ +H  
Sbjct: 72  LAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGY 131

Query: 183 VIKLGMSCVRRVRNSVLAVYVK-------------CGKLI-------------------W 210
           +I++G+       N+++ +Y K              G++                     
Sbjct: 132 IIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDS 191

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK---------LGVVTF 261
            R+ FE M EKD V+WN++I+G  + G  +E  R+  +M    +K         L ++  
Sbjct: 192 VRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAE 251

Query: 262 NILIRSYNQLGQCD----------VAMEMVK------------RMESLGITPDVFTWTCM 299
           N+ I    ++  C           VA  ++             R+ +L    D  +W  +
Sbjct: 252 NVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSI 311

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I+G  QNG   + L  F++M    + P   + +S + AC  L  L +G ++H    + GF
Sbjct: 312 IAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGF 371

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
            +++ + +SL++MY+KC  +  A+++FD ++ +D+ SW +MI G    G    A ELF +
Sbjct: 372 DENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQ 431

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           M+   + PN + +  +++     G  DEA   F  M ++
Sbjct: 432 METEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRD 470



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 125/559 (22%), Positives = 222/559 (39%), Gaps = 127/559 (22%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTKLLSVYAKCGCL--------- 107
           N + ++L++C     ++L   LH ++  V  + D++    L+++Y+K   L         
Sbjct: 107 NVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLG 166

Query: 108 -----------------------DDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
                                  D  R++FE M E++L +W+ +I   +R+  + E + +
Sbjct: 167 AGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRM 226

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
              M    L PD F    +L       D   GK +H   I+ G+     V +S++ +Y K
Sbjct: 227 IREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAK 286

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--- 261
           C ++  + R F  + E+DG++WNS+I+G  Q G  DE  R F +M   +IK    +F   
Sbjct: 287 CTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSI 346

Query: 262 ---------------------------NILIRS-----YNQLGQCDVAMEMVKRMESLGI 289
                                      NI I S     Y + G    A ++  RM     
Sbjct: 347 MPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMR---- 402

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             D+ +WT MI G A +G+   A++LF++M   G+ PN V   + ++AC+          
Sbjct: 403 LRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACS---------- 452

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
                   G  D+              +   +  R F +    + Y+  S + G  +AG 
Sbjct: 453 ------HGGLVDEAW------------KYFNSMTRDFGIAPGVEHYAAVSDLLG--RAGR 492

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
             +AY+    M    + P    W  L+S    + N D A  +  R+ + D    NT ++ 
Sbjct: 493 LEEAYDFICGMH---IGPTGSIWATLLSACRVHXNIDMAEKVANRILEVD--PNNTGAYI 547

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV--LPACAYLVASNKV------KE 521
            L           N     R+ + +  +   +  + +   PAC+++   NKV       E
Sbjct: 548 LLA----------NIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDE 597

Query: 522 IHGCV--LRRSLESSLPVM 538
            H C   +R ++E  + +M
Sbjct: 598 SHPCYEKIREAMEVLVELM 616



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG   E + ++  +     K    T  ++L    ++  I   +++H   +    + D++V
Sbjct: 217 NGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYV 276

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAKC  + D+  VF  + ER+  +W+++I    ++  + E +  F  M+   +
Sbjct: 277 ASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKI 336

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P  + F  I+ AC +      GK +H  + + G      + +S++ +Y KCG +  A++
Sbjct: 337 KPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQ 396

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M  +D V+W +MI G    G+  +A  LF++M  E IK   V F  ++ + +  G 
Sbjct: 397 IFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGL 456

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            D A +    M    GI P V  +  +     + GR  +A D    M    + P G    
Sbjct: 457 VDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMH---IGPTGSIWA 513

Query: 333 SAISAC 338
           + +SAC
Sbjct: 514 TLLSAC 519


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 227/738 (30%), Positives = 366/738 (49%), Gaps = 89/738 (12%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           +  +LQ C      E GK +HS++   GM+    +   ++ +YV CG L+  RR F+ + 
Sbjct: 60  YCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGIL 119

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKM---------------------------CRE 252
                 WN ++S Y +IG   E+  LF+KM                           C+ 
Sbjct: 120 NDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKR 179

Query: 253 E----IKLGVVTFNI----LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFA 304
                +KLG  ++N     LI +Y + G+ + A  +   +       DV +W  MISG  
Sbjct: 180 VHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSD----RDVVSWNSMISGCT 235

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
            NG +   L+ F +M  +GV  +  T+ + + AC ++  L +G  +H+  VK GF+  V+
Sbjct: 236 MNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVM 295

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
             N+L++MYSKC  L  A  VF  + +  + SW S+IA + + G   +A  LF +MQ   
Sbjct: 296 FNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKG 355

Query: 425 VPP-----------------------------------NVITWNVLISGYIQNGNEDEAV 449
           + P                                   N+   N L++ Y + G+ +EA 
Sbjct: 356 LRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEAN 415

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
            +F ++       +N  SWN++I GY Q    N AL +F  MQ     P+ VT+  VLPA
Sbjct: 416 LIFSQL-----PVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQ-LKPDDVTMACVLPA 469

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           CA L A  K +EIHG +LR+   S L V  +L+D Y K G +V ++ +FD +  KD+I W
Sbjct: 470 CAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILW 529

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
             +I GY +HGF   A+  F++M+  G++P   +F SI+ A + +G++  G K+F S+  
Sbjct: 530 TVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKS 589

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
              I P +EHY+ M+DL  RSG L  A +FIE MPI+PD++IW ALL+ CRIH +++LA 
Sbjct: 590 ECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAE 649

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLV 749
              E +F+LEP +     L+  +YA   K E+  K+++   +   +N  G  WIEV+   
Sbjct: 650 KVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKF 709

Query: 750 YTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLA 804
             F  G  S   + ++ S L+ +   +     + +  ++ +  ++  KE +   HSEKL 
Sbjct: 710 NIFFAGDTSHPQAKMIDSLLRKLTMKMNRGGYSNKIKYALINADDRLKEVLLCAHSEKL- 768

Query: 805 LAFALIGSSQAPHTIRIV 822
              A++     PHT ++ 
Sbjct: 769 ---AMLQVDATPHTKKVT 783



 Score =  212 bits (539), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 165/620 (26%), Positives = 280/620 (45%), Gaps = 83/620 (13%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL-VTEID 90
            C  G L  A+ +L    +Q +++  NTY ++LQ C +  S+   +++H+ ++     ID
Sbjct: 34  FCEMGDLRNAMKLLSR--SQRSELELNTYCSVLQLCAELKSLEDGKRVHSIISSNGMAID 91

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
             +  KL+ +Y  CG L   R +F+ +    ++ W+ ++  Y++   +RE V LF  M +
Sbjct: 92  EVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQE 151

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G+  D + F  +L+           K +H  V+KLG      V NS++A Y KCG++  
Sbjct: 152 LGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVES 211

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL-------------- 256
           AR  F+ + ++D V+WNSMISG    G +      F +M    + +              
Sbjct: 212 ARILFDELSDRDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACAN 271

Query: 257 ---------------------GVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                                GV+  N L+  Y++ G  + A E+  +M    I     +
Sbjct: 272 VGNLTLGRALHAYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIV----S 327

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           WT +I+   + G   +A+ LF EM   G+ P+   +TS + AC    +L  G E+H+   
Sbjct: 328 WTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIK 387

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K     ++ V N+L+NMY+KC  +E A  +F  +  K++ SWN+MI GY Q     +A +
Sbjct: 388 KNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQ 447

Query: 416 LFIKMQESDVPPNV--------------------ITWNVLISGYIQNGNEDEA-VDLFQR 454
           LF+ MQ+   P +V                    I  ++L  GY  + +   A VD++ +
Sbjct: 448 LFLDMQKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVK 507

Query: 455 MGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
            G         +   K++   W  +IAGY   G    A+  F KM+ +   P   +  S+
Sbjct: 508 CGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSI 567

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL------IDTYAKSGNIVYSRTIFDG 560
           L AC +   S  +KE  G  L  S++S   +   L      +D   +SGN+  +    + 
Sbjct: 568 LYACTH---SGLLKE--GWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIET 622

Query: 561 MSSK-DIITWNSLICGYVLH 579
           M  K D   W +L+ G  +H
Sbjct: 623 MPIKPDAAIWGALLSGCRIH 642



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 12/223 (5%)

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
           T   N+ I  + ++G   NA+ +  + Q S    N  T  SVL  CA L +    K +H 
Sbjct: 24  TVDKNAKICKFCEMGDLRNAMKLLSRSQRSELELN--TYCSVLQLCAELKSLEDGKRVHS 81

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
            +    +     +   L+  Y   G++V  R IFDG+ +  I  WN L+  Y   G +  
Sbjct: 82  IISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRE 141

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMI 644
           ++ LF++M+  G++ +  TF  +     L G     K   C     Y +      Y+A++
Sbjct: 142 SVGLFEKMQELGIRGDSYTFTCV-----LKGFAASAKVRECKRVHGYVLKLGFGSYNAVV 196

Query: 645 D----LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           +     Y + G++E A    +++  + D   W ++++ C ++G
Sbjct: 197 NSLIAAYFKCGEVESARILFDELS-DRDVVSWNSMISGCTMNG 238


>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g02750-like [Cucumis sativus]
          Length = 741

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 229/698 (32%), Positives = 364/698 (52%), Gaps = 59/698 (8%)

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           +TE ++     ++S YAK G + +ARE+F+ M +RNL +W++MI  Y  ++   +   LF
Sbjct: 41  MTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDAARLF 100

Query: 146 FLMVQDGLFPDDFLFPKILQAC-GNCGDFE-AGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
                D +F  D     ++  C    G+ E A +L + L  K    C    RN+++A Y 
Sbjct: 101 -----DRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVC----RNALIAGYA 151

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           K      A++ F+ M  K+ V+WNS++SGY + G+     + F+ M        VV++N+
Sbjct: 152 KKRLFREAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGER----NVVSWNL 207

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM---- 319
           ++  Y  +G  D A    K++     TP+V +W  M+SGFA  GR ++A +LF EM    
Sbjct: 208 MVDGYVGVGDLDSAWMFFKKIP----TPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKN 263

Query: 320 -----SFVGV----------------MP--NGVTITSAISACTDLKALAMGMEIHSLAVK 356
                + +G                 MP  + V+ T+ I+    +  L    EI +L   
Sbjct: 264 LVSWNAMIGAYVRENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNL--- 320

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
           M +  ++    ++IN Y +   ++ A  +F  I  +D   WNSMI GY   G   +A  L
Sbjct: 321 MPY-KNIAAQTAMINGYLQSGRMDEANEIFSQISVRDSVCWNSMITGYAHCGRTDEALRL 379

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F +M    V  ++++WN +I+ Y Q G  D+A+++F     N+  +RN  SWNSLI GY 
Sbjct: 380 FQEM----VCKDMVSWNTMIAAYAQAGQMDKALEMF-----NEMQERNVVSWNSLITGYV 430

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           Q G    AL  F  M+     P+  TI+  L A A L A N   ++H   ++    + L 
Sbjct: 431 QNGLYFEALNCFILMKQQGEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLF 490

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           V N+++  YAKSG +  +  +F  +  KD+++WNSLI GY L+G    A++LF+ M   G
Sbjct: 491 VKNAILTMYAKSGRVPEAENVFAEIKXKDVVSWNSLIAGYALNGCGKEAVELFEVMPLRG 550

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           + P+  TF  ++ A +  G VD G  +F S+TE Y I P  EHY+ +I+L GR G+LEEA
Sbjct: 551 IIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEA 610

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
           +E ++ M     + IW ALL ACRIH N++LA  + ERL  LEP +     L+  ++A  
Sbjct: 611 VEIVQGMKTVSSAKIWGALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEA 670

Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           G+ +   +VR L +EN      G  WIE+ N ++ F++
Sbjct: 671 GRWDMVERVRVLMKENKAEKQPGCSWIEIDNQLHCFLS 708


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 240/789 (30%), Positives = 384/789 (48%), Gaps = 82/789 (10%)

Query: 61  INLLQACIDSNSIHLARKLHA------FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVF 114
           + LL+ C+  + + L  ++HA       L+        ++T+L+ +Y       DA  VF
Sbjct: 40  LALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRFRDAVAVF 99

Query: 115 EDMRERNL---YTWSAMIGAYSRDQRWREVVELFFLMV---QDGLFPDDFLFPKILQACG 168
             +          W+ +I  ++     R  V LF++ +        PD    P ++++C 
Sbjct: 100 SSLPRAAAAAALPWNWLIRGFTMAGHHRLAV-LFYVKMWAHPSSPRPDGHTLPYVVKSCA 158

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
             G    G+L+H     LG+     V ++++ +Y   G L  AR  F+ MDE+D V WN 
Sbjct: 159 ALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNV 218

Query: 229 MISGYFQIGENDEAHRLFDKM------------------CREE-------------IKLG 257
           M+ GY + G+   A  LF  M                  C  E             +K G
Sbjct: 219 MMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYG 278

Query: 258 ----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
               V   N L+  Y +  QC   +E   R+  L    D+ TW  MISG  QNG    AL
Sbjct: 279 LEPEVAVANTLVSMYAKC-QC---LEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDAL 334

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
            LF +M   G+ P+ VT+ S + A T+L     G EIH   V+     DV + ++L+++Y
Sbjct: 335 RLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIY 394

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN-VITW 432
            KC ++  A+ VFD  K  DV   ++MI+GY        A ++F  +    + PN V+  
Sbjct: 395 FKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVA 454

Query: 433 NVL--------------ISGYIQNGN-------EDEAVDLFQRMGKND--------KVKR 463
           + L              + GY+           E   +D++ + G+ D           +
Sbjct: 455 STLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAK 514

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           +  +WNS+I+ + Q G+   AL +FR+M       N VTI S+L ACA L A    KEIH
Sbjct: 515 DEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIH 574

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
           G +++  + + L   ++LID Y K GN+  +  +F+ M  K+ ++WNS+I  Y  HG   
Sbjct: 575 GIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVK 634

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            ++DL   M+  G K +  TFL++I A + AG V  G ++F  +TE Y I P +EH S M
Sbjct: 635 ESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCM 694

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           +DLY R+GKL++AM+FI DMP +PD+ IW ALL ACR+H N++LA +A + LF L+P + 
Sbjct: 695 VDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNC 754

Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
               L+  I A+ G+ +   K+R+L ++   +   G  W++V N  + FV    +   S+
Sbjct: 755 GYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFVAADKNHPDSE 814

Query: 764 LLYSWLQNV 772
            +Y  L+++
Sbjct: 815 EIYMSLKSL 823



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 145/288 (50%), Gaps = 3/288 (1%)

Query: 37  RLNEA-ITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVK 94
           R++EA + +   +   G K       + L AC    ++ + ++LH + L    E   +V+
Sbjct: 429 RMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVE 488

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           + L+ +Y+KCG LD +  +F  M  ++  TW++MI +++++    E ++LF  M+ +G+ 
Sbjct: 489 SALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVK 548

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            ++     IL AC        GK +H ++IK  +       ++++ +Y KCG L  A R 
Sbjct: 549 YNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRV 608

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           FE M EK+ V+WNS+IS Y   G   E+  L   M  E  K   VTF  LI +    GQ 
Sbjct: 609 FEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQV 668

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
              + + + M E   I P V   +CM+  +++ G+  +A+    +M F
Sbjct: 669 QEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPF 716



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 3/199 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG   EA+ +   +  +G K    T  ++L AC    +I+  +++H   +      D+F 
Sbjct: 529 NGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFA 588

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           ++ L+ +Y KCG L+ A  VFE M E+N  +W+++I AY      +E V+L   M ++G 
Sbjct: 589 ESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGF 648

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             D   F  ++ AC + G  + G +L   +  +  +       + ++ +Y + GKL  A 
Sbjct: 649 KADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAM 708

Query: 213 RFFESMDEK-DGVAWNSMI 230
           +F   M  K D   W +++
Sbjct: 709 QFIADMPFKPDAGIWGALL 727


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 224/651 (34%), Positives = 331/651 (50%), Gaps = 79/651 (12%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P+   W  M+ G+A +     AL L+  M  +G++PN  T    + +C   KA   G +I
Sbjct: 29  PNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQI 88

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM---------------------- 388
           H   +K+G+  D+ V  SLI+MY++   LE A +VFD                       
Sbjct: 89  HGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNI 148

Query: 389 ---------IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN----------- 428
                    I  KDV SWN+MI+GY + G   +A ELF +M +++V P+           
Sbjct: 149 RSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSAC 208

Query: 429 -----------VITW-------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                      V +W             N LI  Y + G  + A  LF+ +   D V   
Sbjct: 209 AQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVV--- 265

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             SWN+LI GY  +     AL +F++M  S   PN VTI+S+LPACA+L A +  + IH 
Sbjct: 266 --SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHV 323

Query: 525 CVLRR--SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
            + ++   + ++  +  SLID YAK G+I  +  +F+ M  K + +WN++I G+ +HG  
Sbjct: 324 YIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRA 383

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
           +A  DLF +M+  G++P+  TF+ ++ A S +G +DLG+ +F S+T+ Y I P +EHY  
Sbjct: 384 NAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGC 443

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           MIDL G SG  +EA E I+ MP+EPD  IW +LL ACR HGN++LA      L  +EP +
Sbjct: 444 MIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPEN 503

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGW----- 757
                L+  IYA  G+ ++  KVR L      +   G   IE+ + V+ F+ G       
Sbjct: 504 PGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVGDKLHPRN 563

Query: 758 SESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
            E Y  L               +S     +EEE KE     HSEKLA+AF LI S++   
Sbjct: 564 REIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI-STKPGT 622

Query: 818 TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            + IVKN+R+C +CHE  K VS ++  EI   D    HHF++G CSC D+W
Sbjct: 623 KLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673



 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/505 (24%), Positives = 227/505 (44%), Gaps = 73/505 (14%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A  VF  ++E N   W+ M+  Y+        ++L+ +M+  GL P+ + FP +L++C  
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
              FE G+ +H  V+KLG      V  S++++Y + G+L  A + F+    +D V++ ++
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           I+GY   G    A  +FD++  ++    VV++N +I  Y + G    A+E+ K M    +
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKD----VVSWNAMISGYAETGSYKEALELFKEMMKTNV 194

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            PD                                     T+ + +SAC   +++ +G +
Sbjct: 195 RPD-----------------------------------EGTMVTVLSACAQSRSVELGRQ 219

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +HS     GF  ++ + N+LI++YSKC ++E A  +F+ +  KDV SWN++I GY     
Sbjct: 220 VHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNL 279

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISG---------------YIQNGNED-------- 446
             +A  LF +M  S   PN +T   ++                 YI    +D        
Sbjct: 280 YKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLR 339

Query: 447 -EAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
              +D++ + G         N  + ++ +SWN++I G+   G+ N    +F +M+ +   
Sbjct: 340 TSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIE 399

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSRT 556
           P+ +T + +L AC++    +  + I   + +   +   L     +ID    SG    ++ 
Sbjct: 400 PDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKE 459

Query: 557 IFDGMS-SKDIITWNSLICGYVLHG 580
           +   M    D + W SL+     HG
Sbjct: 460 MIKTMPMEPDGVIWCSLLKACRRHG 484



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 198/460 (43%), Gaps = 68/460 (14%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDA------- 110
           T+  LL++C  S +    +++H   L L  E D++V T L+S+YA+ G L+DA       
Sbjct: 68  TFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRS 127

Query: 111 ------------------------REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
                                   +E+F+++  +++ +W+AMI  Y+    ++E +ELF 
Sbjct: 128 SHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFK 187

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M++  + PD+     +L AC      E G+ +HS +   G     ++ N+++ +Y KCG
Sbjct: 188 EMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCG 247

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           ++  A   FE +  KD V+WN++I GY  +    EA  LF +M R       VT   ++ 
Sbjct: 248 QVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILP 307

Query: 267 SYNQLGQCDVA----MEMVKRMESLGITPDVFT--------------------------- 295
           +   LG  D+     + + K+++ +   P + T                           
Sbjct: 308 ACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSL 367

Query: 296 --WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HS 352
             W  MI GFA +GR +   DLF  M   G+ P+ +T    +SAC+    L +G  I  S
Sbjct: 368 SSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKS 427

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           +      T  +     +I++        EA E +  M  + D   W S++    + G   
Sbjct: 428 MTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLE 487

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
            A E F +      P N  ++ +L + Y   G  DE   +
Sbjct: 488 LA-ESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKV 526



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 156/308 (50%), Gaps = 7/308 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
            G   EA+ +   +     +    T + +L AC  S S+ L R++H+++ +     ++ +
Sbjct: 176 TGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKI 235

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y+KCG ++ A  +FE +  +++ +W+ +IG Y+    ++E + LF  M++ G 
Sbjct: 236 VNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGE 295

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIK--LGMSCVRRVRNSVLAVYVKCGKLIWA 211
            P+D     IL AC + G  + G+ +H  + K    ++    +R S++ +Y KCG +  A
Sbjct: 296 SPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAA 355

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
            + F SM  K   +WN+MI G+   G  +    LF +M +  I+   +TF  L+ + +  
Sbjct: 356 HQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHS 415

Query: 272 GQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G+ D+   + K M +   ITP +  + CMI     +G   +A ++ K M    + P+GV 
Sbjct: 416 GKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMP---MEPDGVI 472

Query: 331 ITSAISAC 338
             S + AC
Sbjct: 473 WCSLLKAC 480


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 259/924 (28%), Positives = 441/924 (47%), Gaps = 97/924 (10%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDS--NSIHLARKLHAFLNLVT-EIDV 91
            NG+ +EA      +   G       + + L+AC +S  +   L  ++H  ++      DV
Sbjct: 623  NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 682

Query: 92   FVKTKLLSVYAKC-GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
             V   L+S+Y  C    +DAR VF+ +  RN  +W+++I  YSR        +LF  M +
Sbjct: 683  VVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQK 742

Query: 151  DGLF----PDDFLFPKILQACGNCGDFEAGKL--MHSLVIKLGMSCVRRVRNSVLAVYVK 204
            +GL     P+++ F  ++ A  +  DF    L  M + V K G      V +++++ + +
Sbjct: 743  EGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFAR 802

Query: 205  CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
             G    A+  FE M  ++ V+ N ++ G  +  + + A ++F +M ++ + +   ++ +L
Sbjct: 803  FGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVL 861

Query: 265  IRSYNQLGQCDVAMEMVKRMES------------------------------------LG 288
            + ++++    +      + + +                                    L 
Sbjct: 862  LSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELM 921

Query: 289  ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
            +  D  +W  +ISG  QN  +  A + F  M   G MP+  T+ S +S+C  L  + +G 
Sbjct: 922  VEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGE 981

Query: 349  EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA- 407
            +IH   +K+G   DV V N+L+ +Y++        +VF ++ + D  SWNS+I     + 
Sbjct: 982  QIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSE 1041

Query: 408  GYCGKAYELFIKMQESDVPPNVITW----------------------------------- 432
                +A + F++M       + +T+                                   
Sbjct: 1042 ASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIG 1101

Query: 433  NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
            N L+S Y + G  +E   +F RM +     R+  SWNS+I+GY      + A+ +   M 
Sbjct: 1102 NALLSCYGKCGEMNECEKIFARMSET----RDEVSWNSMISGYIHNELLHKAMDLVWFMM 1157

Query: 493  SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
                  +  T  +VL ACA +    +  E+H C +R  +ES + V ++L+D Y+K G I 
Sbjct: 1158 QKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRID 1217

Query: 553  YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR-GTFLSIILAH 611
            Y+   F+ M  +++ +WNS+I GY  HG    AL LF +M   G  P+     L ++ A 
Sbjct: 1218 YASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSAC 1277

Query: 612  SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
            S  G V+ G + F S++E Y++ P +EH+S M+DL GR+GKL+E  +FI  MP++P+  I
Sbjct: 1278 SHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLI 1337

Query: 672  WEALLTA-CRIHG-NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLE 729
            W  +L A CR +G N +L   A E L +LEP + +   L+  +YA   K ED  K R   
Sbjct: 1338 WRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAM 1397

Query: 730  RENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSG 784
            +E   +   G  W+ +K+ V+ FV G       D +Y  L+ +   +       ++ ++ 
Sbjct: 1398 KEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGYIPQTKYAL 1457

Query: 785  LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
              +E E KEE+   HSEK+A+AF L   S  P  IRI+KN+R+C  CH    Y+S +   
Sbjct: 1458 FDLELENKEELLSYHSEKIAVAFVLTRQSALP--IRIMKNLRVCGDCHSAFGYISKIVGR 1515

Query: 845  EIFLADSKCLHHFKNGQCSCGDYW 868
            +I L DS   HHF++G+CSCGDYW
Sbjct: 1516 QIVLRDSNRFHHFEDGKCSCGDYW 1539



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 208/792 (26%), Positives = 358/792 (45%), Gaps = 110/792 (13%)

Query: 1    FFIWILTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEA---ITVLDSIATQGAKVRR 57
            F  +  + F  L SLL K  NP      L  L  + + + +    T+  S  T       
Sbjct: 494  FTTFTASPFPPLKSLLFKPLNPNQCTKSLQDLVDHYKTSTSHCNTTLFSSSET------F 547

Query: 58   NTYINLLQACI---DSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVF 114
             + IN  Q      ++  +HL    + F+      ++F+   L+++Y + G L  A+++F
Sbjct: 548  ESLINRYQGSCCSEEARELHLQSIKYGFVG-----NLFLSNTLINIYVRIGDLGSAQKLF 602

Query: 115  EDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF- 173
            ++M  RNL TW+ +I  Y+++ +  E    F  MV+ G  P+ + F   L+AC   G   
Sbjct: 603  DEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSG 662

Query: 174  -EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC-GKLIWARRFFESMDEKDGVAWNSMIS 231
             + G  +H L+ K        V N ++++Y  C      AR  F+ +  ++ ++WNS+IS
Sbjct: 663  CKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIIS 722

Query: 232  GYFQIGENDEAHRLFDKMCRE----EIKLGVVTFNILIR---SYNQLGQCDVAMEMVKRM 284
             Y + G+   A+ LF  M +E      K    TF  LI    S    G C V  +M+ R+
Sbjct: 723  VYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLC-VLEQMLARV 781

Query: 285  ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP-NG--------------- 328
            E  G   D++  + ++SGFA+ G T  A ++F++M    V+  NG               
Sbjct: 782  EKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAA 841

Query: 329  -----------------VTITSAISACTDL-KALAMGMEIHSLAVKMGFTDD-VLVGNSL 369
                             V + SA S  + L +    G E+H+  ++ G  D+ V +GN L
Sbjct: 842  KVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGL 901

Query: 370  INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
            +NMY+K   +  A  VF+++ +KD  SWNS+I+G  Q      A E F++M+ +   P+ 
Sbjct: 902  VNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSN 961

Query: 430  IT------------W-----------------------NVLISGYIQNGNEDEAVDLFQR 454
             T            W                       N L++ Y + G   E + +F  
Sbjct: 962  FTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSL 1021

Query: 455  MGKNDKVKRNTASWNSLIAGYQQL-GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
            M + D+V     SWNS+I          + A+  F +M    +  + VT +++L A + L
Sbjct: 1022 MPEYDQV-----SWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSL 1076

Query: 514  VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSL 572
                   +IH  VL+  L     + N+L+  Y K G +     IF  MS ++D ++WNS+
Sbjct: 1077 SLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSM 1136

Query: 573  ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF-CSITECY 631
            I GY+ +   H A+DL   M   G + +  TF +++ A +    ++ G +V  C I  C 
Sbjct: 1137 ISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACM 1196

Query: 632  QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
            +   ++   SA++D+Y + G+++ A  F E MP+    S W ++++    HG+ + A+  
Sbjct: 1197 ESDVVVG--SALVDMYSKCGRIDYASRFFELMPLRNVYS-WNSMISGYARHGHGEKALKL 1253

Query: 692  IER-LFDLEPGD 702
              R + D +P D
Sbjct: 1254 FTRMMLDGQPPD 1265


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 213/646 (32%), Positives = 340/646 (52%), Gaps = 69/646 (10%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++  W  M  G A +     AL L+  M  +G++PN  T    + +C   KA   G +I
Sbjct: 97  PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQI 156

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELE------------------------------ 380
           H   +K+G+  D+ V  SLI++Y +   LE                              
Sbjct: 157 HGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYI 216

Query: 381 -AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
            +A+++FD I  KDV SWN+MI+GY + G   +A ELF +M ++++ P+  T   ++S  
Sbjct: 217 ESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSAC 276

Query: 440 IQNGN-----------EDEA-----------VDLFQRMGKNDK--------VKRNTASWN 469
            Q+G+           +D             +DL+ + G+ +         + ++  SWN
Sbjct: 277 AQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWN 336

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           +LI GY  +     AL +F++M  S   PN VT+LS+LPACA+L A +  + IH  + +R
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396

Query: 530 --SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
             S  ++  +  SLID YAK G+I  +  +F+ +  K + +WN++I G+ +HG   AA D
Sbjct: 397 LKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFD 456

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           +F +M+  G++P+  TF+ ++ A S +GM+DLG+ +F ++T+ Y+I P +EHY  MIDL 
Sbjct: 457 IFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLL 516

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           G SG  +EA E I +M +EPD  IW +LL AC+I GN++L     + L  +EP +     
Sbjct: 517 GHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYV 576

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
           L+  IYA  G+  +  K+R L  +   +   G   IE+ ++V+ F+ G      +  +Y 
Sbjct: 577 LLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 636

Query: 768 WLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
            L+ +            +S     +EEE KE     HSEKLA+AF LI S++    + IV
Sbjct: 637 MLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI-STKPGTKLTIV 695

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN+R+C +CHE  K +S ++  EI   D    HHF++G CSC DYW
Sbjct: 696 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 208/437 (47%), Gaps = 71/437 (16%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           L  A  VFE ++E NL  W+ M   ++        ++L+  M+  GL P+ + FP +L++
Sbjct: 84  LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKS 143

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C     F+ G+ +H  V+KLG      V  S+++VYV+ G+L  AR+ F+    +D V++
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSY 203

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
            ++I GY   G  + A +LFD++  ++    VV++N +I  Y + G    A+E+ K M  
Sbjct: 204 TALIKGYASRGYIESAQKLFDEIPVKD----VVSWNAMISGYAETGNYKEALELFKEMMK 259

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
             I PD  T   ++S  AQ+G                                   ++ +
Sbjct: 260 TNIRPDESTMVTVVSACAQSG-----------------------------------SIEL 284

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G ++HS     GF  ++ + NSL+++YSKC ELE A  +F+ +  KDV SWN++I GY  
Sbjct: 285 GRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTH 344

Query: 407 AGYCGKAYELFIKMQESDVPPNVIT------------------W-NVLISGYIQNGNEDE 447
                +A  LF +M  S   PN +T                  W +V I   +++     
Sbjct: 345 MNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNAS 404

Query: 448 A-----VDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           +     +D++ + G         N  + ++ +SWN++I G+   G+ + A  +F +M+  
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKI 464

Query: 495 CFYPNCVTILSVLPACA 511
              P+ +T + +L AC+
Sbjct: 465 GIEPDDITFVGLLSACS 481



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 161/357 (45%), Gaps = 65/357 (18%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  LL++C  S +    +++H   L L  ++D+FV T L+SVY + G L+DAR+VF+  
Sbjct: 136 TFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRS 195

Query: 118 RERNL--YT-----------------------------WSAMIGAYSRDQRWREVVELFF 146
             R++  YT                             W+AMI  Y+    ++E +ELF 
Sbjct: 196 PHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M++  + PD+     ++ AC   G  E G+ +HS +   G     ++ NS++ +Y KCG
Sbjct: 256 EMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCG 315

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           +L  A   FE +  KD ++WN++I GY  +    EA  LF +M R   +   VT   ++ 
Sbjct: 316 ELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILP 375

Query: 267 SYNQLGQCDVA------------------------MEMVKRMESLGITPDVF-------- 294
           +   LG  D+                         ++M  +   +     VF        
Sbjct: 376 ACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435

Query: 295 -TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
            +W  MI GFA +GR   A D+F  M  +G+ P+ +T    +SAC+    L +G  I
Sbjct: 436 SSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHI 492



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 196/438 (44%), Gaps = 71/438 (16%)

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM---YSKCEELEAAERVFDMI 389
           S +  C  L++L +   IH+  +K G  +     + L+ +       + L  A  VF+ I
Sbjct: 38  SLLHNCKTLQSLRL---IHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETI 94

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW----------------- 432
           ++ ++  WN+M  G+  +     A +L++ M    + PN  T+                 
Sbjct: 95  QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQ 154

Query: 433 ------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVK------------ 462
                               LIS Y+QNG  ++A  +F R    D V             
Sbjct: 155 QIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRG 214

Query: 463 --------------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
                         ++  SWN++I+GY + G    AL +F++M  +   P+  T+++V+ 
Sbjct: 215 YIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVS 274

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT 568
           ACA   +    +++H  +      S+L ++NSL+D Y+K G +  +  +F+G+  KD+I+
Sbjct: 275 ACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVIS 334

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT 628
           WN+LI GY     +  AL LF +M   G +PN  T LSI+ A +  G +D+G+ +   I 
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYID 394

Query: 629 ECYQIIPMIEHY-SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
           +  +         +++ID+Y + G +E A +    + +    S W A++    +HG  D 
Sbjct: 395 KRLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADA 453

Query: 688 A--VLAIERLFDLEPGDV 703
           A  + +  R   +EP D+
Sbjct: 454 AFDIFSRMRKIGIEPDDI 471



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 156/308 (50%), Gaps = 7/308 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
            G   EA+ +   +     +   +T + ++ AC  S SI L R++H+++ +     ++ +
Sbjct: 244 TGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKI 303

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y+KCG L+ A  +FE +  +++ +W+ +IG Y+    ++E + LF  M++ G 
Sbjct: 304 VNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 363

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR--RVRNSVLAVYVKCGKLIWA 211
            P+D     IL AC + G  + G+ +H  + K   S      +R S++ +Y KCG +  A
Sbjct: 364 RPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMYAKCGDIEAA 423

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
            + F S+  K   +WN+MI G+   G  D A  +F +M +  I+   +TF  L+ + ++ 
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRS 483

Query: 272 GQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  D+   + + M +   ITP +  + CMI     +G   +A ++   M    + P+GV 
Sbjct: 484 GMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNME---MEPDGVI 540

Query: 331 ITSAISAC 338
             S + AC
Sbjct: 541 WCSLLKAC 548



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 121/238 (50%), Gaps = 14/238 (5%)

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGN---IVYSRTIFDG 560
           LS+L  C  L     ++ IH  +++  L ++   ++ L++    S +   + Y+ ++F+ 
Sbjct: 37  LSLLHNCKTL---QSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFET 93

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           +   +++ WN++  G+ L     +AL L+  M S GL PN  TF  ++ + + +     G
Sbjct: 94  IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEG 153

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
           +++   + +    + +  H +++I +Y ++G+LE+A +  +  P   D   + AL+    
Sbjct: 154 QQIHGHVLKLGYDLDLFVH-TSLISVYVQNGRLEDARKVFDRSP-HRDVVSYTALIKGYA 211

Query: 681 IHGNIDLAVLAIERLFDLEP-GDVLIQRLILQIYAICGKPEDALKV-RKLERENTRRN 736
             G I+ A    ++LFD  P  DV+    ++  YA  G  ++AL++ +++ + N R +
Sbjct: 212 SRGYIESA----QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPD 265


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 225/746 (30%), Positives = 363/746 (48%), Gaps = 82/746 (10%)

Query: 199 LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV 258
           L  ++  G+L  AR+ F+ +   D  A+N++I  Y   G    A  L+  M    +    
Sbjct: 40  LEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNK 99

Query: 259 VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF------------------------ 294
            TF  ++++ + L        +     ++G+  D+F                        
Sbjct: 100 YTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAK 159

Query: 295 -------TWTCMISGFAQNGRTSQALDLFKEMS-FVGVMPNGVTITSAISACTDLKALAM 346
                   W  M++G+A +G    A+    +M    G+ PN  T+ S +       AL  
Sbjct: 160 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQ 219

Query: 347 GMEIHSLAVKMGF---TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           G  +H+  ++       + VL+G +L++MY+KC+ L  A RVF  +  ++  +W+++I G
Sbjct: 220 GTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGG 279

Query: 404 YCQAGYCGKAYELFIKM------------------------------------QESDVPP 427
           +       +A+ LF  M                                     +S +  
Sbjct: 280 FVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHA 339

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           ++   N L+S Y + G  +EA  LF  +   D     T S+ +L++GY Q G+   A  V
Sbjct: 340 DLTAGNSLLSMYAKAGLINEATMLFDEIAIKD-----TISYGALLSGYVQNGKAEEAFLV 394

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           F+KMQ+    P+  T++S++PAC++L A    +  HG V+ R L     + NSLID YAK
Sbjct: 395 FKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAK 454

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G I  SR +FD M ++DI++WN++I GY +HG    A  LF  MK+ G +P+  TF+ +
Sbjct: 455 CGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICL 514

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           I A S +G+V  GK  F ++T  Y I+P +EHY  M+DL  R G L+EA +FI+ MP++ 
Sbjct: 515 IAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKA 574

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           D  +W ALL ACRIH NIDL       +  L P       L+  I++  G+ ++A +VR 
Sbjct: 575 DVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRI 634

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCI 787
           +++    + S G  WIE+   ++ FV G  S   S  +Y  L N+  ++      +    
Sbjct: 635 IQKVKGFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSF 694

Query: 788 EEEEKEEISGI-----HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMH 842
             ++ EE         HSEKLA+AF ++ S     TI + KN+R+C  CH   KY++++ 
Sbjct: 695 VLQDLEEEEKEKALLYHSEKLAIAFGVL-SLNEDKTIFVTKNLRVCGDCHTAIKYMTLVR 753

Query: 843 HCEIFLADSKCLHHFKNGQCSCGDYW 868
           +  I + D+   HHFKNGQCSCGD+W
Sbjct: 754 NRTIIVRDANRFHHFKNGQCSCGDFW 779



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 142/547 (25%), Positives = 242/547 (44%), Gaps = 76/547 (13%)

Query: 105 GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKIL 164
           G L  AR+VF+ +   +   ++A+I AYS    +   ++L+  M+   + P+ + FP +L
Sbjct: 47  GQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVL 106

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
           +AC    D  AG+ +H+    +G+     V  +++ +Y++C +   A   F  M  +D V
Sbjct: 107 KACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVV 166

Query: 225 AWNSMISGYFQIGENDEA-HRLFDKMCREEIKLGVVTFNILIRSYNQLGQC--------- 274
           AWN+M++GY   G    A   L D   R  ++    T   L+    Q G           
Sbjct: 167 AWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAY 226

Query: 275 ----------------DVAMEMVKRMESLGITPDVF---------TWTCMISGFAQNGRT 309
                              ++M  + + L     VF         TW+ +I GF    R 
Sbjct: 227 CLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRM 286

Query: 310 SQALDLFKEMSFVGV-MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
           ++A +LFK+M   G+   +  ++ SA+  C  L  L MG ++H+L  K G   D+  GNS
Sbjct: 287 TEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNS 346

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           L++MY+K   +  A  +FD I  KD  S+ ++++GY Q G   +A+ +F KMQ  +V P+
Sbjct: 347 LLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPD 406

Query: 429 VITWNVLIS-----GYIQNGNEDEA-----------------VDLFQRMGKNDKVK---- 462
           + T   LI        +Q+G                      +D++ + G+ D  +    
Sbjct: 407 IATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFD 466

Query: 463 ----RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY--LVAS 516
               R+  SWN++IAGY   G    A  +F  M++  F P+ VT + ++ AC++  LV  
Sbjct: 467 KMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTE 526

Query: 517 NKVKEIHGCVLRRSLESSLPVMNS---LIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSL 572
            K    H           LP M     ++D  A+ G +  +      M  K D+  W +L
Sbjct: 527 GK----HWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGAL 582

Query: 573 ICGYVLH 579
           +    +H
Sbjct: 583 LGACRIH 589



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 201/458 (43%), Gaps = 39/458 (8%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVK 94
           G  + AI +  S+        + T+  +L+AC     +   R +HA    V    D+FV 
Sbjct: 78  GPFHAAIDLYRSMLYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVS 137

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWRE-VVELFFLMVQDGL 153
           T L+ +Y +C     A  VF  M  R++  W+AM+  Y+    +   +  L  +  + GL
Sbjct: 138 TALIDLYIRCARFGPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGL 197

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR---VRNSVLAVYVKCGKLIW 210
            P+      +L      G    G  +H+  ++  +        +  ++L +Y KC  L++
Sbjct: 198 RPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVY 257

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE------------------ 252
           A R F  M  ++ V W+++I G+       EA  LF  M  E                  
Sbjct: 258 ACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCA 317

Query: 253 ---EIKLGVVTFNILIRS------------YNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
              ++++G     +L +S             +   +  +  E     + + I  D  ++ 
Sbjct: 318 SLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIK-DTISYG 376

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            ++SG+ QNG+  +A  +FK+M    V P+  T+ S I AC+ L AL  G   H   +  
Sbjct: 377 ALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIR 436

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           G   +  + NSLI+MY+KC  ++ + +VFD +  +D+ SWN+MIAGY   G   +A  LF
Sbjct: 437 GLALETSICNSLIDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLF 496

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           + M+     P+ +T+  LI+    +G   E    F  M
Sbjct: 497 LSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTM 534



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 184/417 (44%), Gaps = 52/417 (12%)

Query: 35  NGRLNEAIT-VLDSIATQGAKVRRNTYINLLQ------ACIDSNSIHLARKLHAFLNLVT 87
           +G  + AI  +LD     G +   +T ++LL       A     S+H A  L A+L+   
Sbjct: 178 HGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVH-AYCLRAYLD-QN 235

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           E  V + T LL +YAKC  L  A  VF  M  RN  TWSA+IG +    R  E   LF  
Sbjct: 236 EEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTEAFNLFKD 295

Query: 148 MVQDGL-FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M+ +G+ F         L+ C +  D   G  +H+L+ K G+       NS+L++Y K G
Sbjct: 296 MLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLLSMYAKAG 355

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----- 261
            +  A   F+ +  KD +++ +++SGY Q G+ +EA  +F KM    ++  + T      
Sbjct: 356 LINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIP 415

Query: 262 ------------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITP 291
                                         N LI  Y + G+ D++ ++  +M +     
Sbjct: 416 ACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQVFDKMPA----R 471

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-I 350
           D+ +W  MI+G+  +G   +A  LF  M   G  P+ VT    I+AC+    +  G    
Sbjct: 472 DIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLVTEGKHWF 531

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQ 406
            ++  K G    +     ++++ ++   L EA + +  M    DV  W +++ G C+
Sbjct: 532 DTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALL-GACR 587



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 167/362 (46%), Gaps = 15/362 (4%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYI-NLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           R+ EA  +   +  +G      T + + L+ C     + +  +LHA L       D+   
Sbjct: 285 RMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAG 344

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             LLS+YAK G +++A  +F+++  ++  ++ A++  Y ++ +  E   +F  M    + 
Sbjct: 345 NSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQ 404

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD      ++ AC +    + G+  H  VI  G++    + NS++ +Y KCG++  +R+ 
Sbjct: 405 PDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQV 464

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F+ M  +D V+WN+MI+GY   G   EA  LF  M  +  +   VTF  LI + +  G  
Sbjct: 465 FDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGLV 524

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
                    M    GI P +  + CM+   A+ G   +A    + M     +   V +  
Sbjct: 525 TEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMP----LKADVRVWG 580

Query: 334 A-ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEEL-EAAE-RVFDM 388
           A + AC   K + +G ++  +  K+G       GN ++  N++S      EAAE R+   
Sbjct: 581 ALLGACRIHKNIDLGKQVSRMIQKLGPEG---TGNFVLLSNIFSAAGRFDEAAEVRIIQK 637

Query: 389 IK 390
           +K
Sbjct: 638 VK 639



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 9/248 (3%)

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           W   +  +I  G    A  +F R+   D       ++N+LI  Y   G  + A+ ++R M
Sbjct: 36  WQQELEQHIARGQLALARQVFDRIPAPD-----ARAYNALIRAYSWRGPFHAAIDLYRSM 90

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
                 PN  T   VL AC+ L      + IH       L + L V  +LID Y +    
Sbjct: 91  LYFRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARF 150

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL-DLFDQMKSFGLKPNRGTFLSIILA 610
             +  +F  M  +D++ WN+++ GY  HG +H A+  L D     GL+PN  T +S++  
Sbjct: 151 GPAANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPL 210

Query: 611 HSLAGMVDLGKKVFCSITECY--QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
            +  G +  G  V       Y  Q    +   +A++D+Y +   L  A      M +  +
Sbjct: 211 LAQHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNE 270

Query: 669 SSIWEALL 676
            + W AL+
Sbjct: 271 VT-WSALI 277


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 223/741 (30%), Positives = 369/741 (49%), Gaps = 87/741 (11%)

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV--KCGKLIWARRFFESMDEKDGVAWN 227
           C   +  + +H   IK G++    ++N V+      + G   +ARR F+ + E +   WN
Sbjct: 49  CESMDQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWN 108

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES- 286
           +MI GY ++        L+ +M R  +K    TF  L + + +    D+A+E  +++   
Sbjct: 109 TMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTR----DIALEYGRQLHGH 164

Query: 287 --------------------------------LGITP--DVFTWTCMISGFAQNGRTSQA 312
                                             + P  DV TW  +IS + + G+  ++
Sbjct: 165 VLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEES 224

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
             LF  M    V+P  VT+   +SAC+ LK L  G ++HS         ++++ N++I+M
Sbjct: 225 RRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDM 284

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y+ C E+++                               A  +F  M   D+    I+W
Sbjct: 285 YADCGEMDS-------------------------------ALGIFRSMNNRDI----ISW 309

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
             ++SG+   G  D A + F +M + D V     SW ++I GY +  +   AL +FR MQ
Sbjct: 310 TTIVSGFTNLGEIDVARNYFDKMPEKDYV-----SWTAMIDGYIRSNRFKEALELFRNMQ 364

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
           ++   P+  T++SVL ACA+L A    + I   + R  +++ L V N+LID Y K G++ 
Sbjct: 365 ATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVD 424

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            + +IF  MS +D  TW ++I G  ++G    ALD+F  M    + P+  T++ ++ A +
Sbjct: 425 KAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACT 484

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
             G+VD G+K F  +T  + I P I HY  ++DL  R+G+L+EA E IE+MPI+ +S +W
Sbjct: 485 HTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVW 544

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
            ALL  CR++   D+A + ++++ +LEP +  +  L+  IYA C +  D  ++R++  + 
Sbjct: 545 GALLAGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDK 604

Query: 733 TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCI 787
             +   G   IE+   V+ FV G  S   +  + + L  + +++     +   S   L I
Sbjct: 605 GIKKXPGCSLIEMNGRVHEFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDI 664

Query: 788 EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIF 847
            EE+KE     HSEKLA+AF LI S     TIRI KN+RMC+ CH  AK VS +++ E+ 
Sbjct: 665 AEEDKENSVFRHSEKLAIAFGLINSPPGV-TIRITKNLRMCMDCHNMAKLVSKVYNREVI 723

Query: 848 LADSKCLHHFKNGQCSCGDYW 868
           + D    HHFK+G CSC DYW
Sbjct: 724 VRDRTRFHHFKHGLCSCKDYW 744



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 208/442 (47%), Gaps = 40/442 (9%)

Query: 51  QGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDD 109
           +G K  R T+  L +      ++   R+LH   L    + +VFV T L+ +Y  CG LD 
Sbjct: 133 RGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDT 192

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           AR VF+   + ++ TW+ +I AY++  ++ E   LF +M    + P       +L AC  
Sbjct: 193 ARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSK 252

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
             D   GK +HS V    +     + N+++ +Y  CG++  A   F SM+ +D ++W ++
Sbjct: 253 LKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTI 312

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           +SG+  +GE D A   FDKM  ++     V++  +I  Y +  +   A+E+ + M++  +
Sbjct: 313 VSGFTNLGEIDVARNYFDKMPEKD----YVSWTAMIDGYIRSNRFKEALELFRNMQATNV 368

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            PD F                                   T+ S ++AC  L AL +G  
Sbjct: 369 KPDEF-----------------------------------TMVSVLTACAHLGALELGEW 393

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           I +   +    +D+ V N+LI+MY KC +++ AE +F  +  +D ++W +MI G    G+
Sbjct: 394 IRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGH 453

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
             KA ++F  M ++ + P+ IT+  ++S     G  D+    F RM     ++ N A + 
Sbjct: 454 GEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYG 513

Query: 470 SLIAGYQQLGQKNNALGVFRKM 491
            L+    + G+   A  V   M
Sbjct: 514 CLVDLLARAGRLKEAYEVIENM 535



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 113/234 (48%), Gaps = 3/234 (1%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL-VT 87
           +D    + R  EA+ +  ++     K    T +++L AC    ++ L   +  +++    
Sbjct: 344 IDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKI 403

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + D+FV+  L+ +Y KCG +D A  +F +M +R+ +TW+AMI   + +    + +++F  
Sbjct: 404 KNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSN 463

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M++  + PD+  +  +L AC + G  + G K    +  + G+         ++ +  + G
Sbjct: 464 MLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAG 523

Query: 207 KLIWARRFFESMDEK-DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
           +L  A    E+M  K + + W ++++G     E+D A  +  ++   E   G V
Sbjct: 524 RLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPDNGAV 577


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 236/754 (31%), Positives = 373/754 (49%), Gaps = 89/754 (11%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           F + L+ C    D   GK +H+L IK  +     + N  L +Y KC +L  ARR F    
Sbjct: 11  FRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVF---- 66

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
                               D  H              V +FN LI +Y +    +VA +
Sbjct: 67  --------------------DHTH-----------DCNVFSFNTLISAYAKESYVEVAHQ 95

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           +   M      PD  ++  +I+ +A+ G T  A  LF EM    +  +G T++  I+AC 
Sbjct: 96  LFDEMPQ----PDSVSYNTLIAAYARRGDTQPAFQLFLEMREAFLDMDGFTLSGIITAC- 150

Query: 340 DLKALAMGM--EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYS 396
               + +G+  ++H+L+V  G    V VGN+LI  YSK   L+ A R+F  + +D+D  S
Sbjct: 151 ---GINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVS 207

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---------------------NVL 435
           WNSM+  Y Q     KA EL+++M    +  ++ T                       ++
Sbjct: 208 WNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLI 267

Query: 436 ISGYIQNGNEDEA-VDLFQRMGK---------NDKVKRNTASWNSLIAGYQQLGQ-KNNA 484
            SGY QN +     +DL+ + G          ++    +   WN++I+GY       + A
Sbjct: 268 KSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEA 327

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS-LPVMNSLID 543
           L  FR++Q     P+  +++ V+ AC+ + + ++ +++HG  L+  + S+ + V N+LI 
Sbjct: 328 LECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIA 387

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGT 603
            Y+K GN+  ++T+FD M   + +++NS+I GY  HG    +L LF +M      P   T
Sbjct: 388 MYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNIT 447

Query: 604 FLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
           F+S++ A +  G V+ GK  F  + + + I P   H+S MIDL GR+GKL EA   IE +
Sbjct: 448 FISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETI 507

Query: 664 PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDAL 723
           P +P    W ALL ACRIHGN++LA+ A  RL  L+P +     ++  IY+  G+ +DA 
Sbjct: 508 PFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPYVMLANIYSDNGRLQDAA 567

Query: 724 KVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS-------ESYSDLLYSWLQNVPENV 776
            VRKL R+   +   G  WIEV   ++ FV            + Y + +   ++ V    
Sbjct: 568 SVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTFHPMIKKIQEYLEEMMRKIKKVGYTP 627

Query: 777 TARSSHSGL--CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHET 834
             RS+  G    + + E+E   G HSEKLA++F L+ S++    I + KN+R+CV CH  
Sbjct: 628 EVRSASVGGDDRVWQREEELRLGHHSEKLAVSFGLM-STREGEPILVFKNLRICVDCHNA 686

Query: 835 AKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            KY+S +   EI + DS   H FK+GQCSCG YW
Sbjct: 687 IKYISEVVKREITVRDSHRFHCFKDGQCSCGGYW 720



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 234/521 (44%), Gaps = 74/521 (14%)

Query: 58  NTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           +++   L+ CI    +   + LHA ++        ++    L +Y+KC  L  AR VF+ 
Sbjct: 9   HSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDH 68

Query: 117 MRERNLY-------------------------------TWSAMIGAYSRDQRWREVVELF 145
             + N++                               +++ +I AY+R    +   +LF
Sbjct: 69  THDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLF 128

Query: 146 FLMVQDGLFPDDFLFPKILQACG-NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
             M +  L  D F    I+ ACG N G     + +H+L +  G+     V N+++  Y K
Sbjct: 129 LEMREAFLDMDGFTLSGIITACGINVGLI---RQLHALSVVTGLDSYVSVGNALITSYSK 185

Query: 205 CGKLIWARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-- 261
            G L  ARR F  + E +D V+WNSM+  Y Q  E  +A  L+ +M    + + + T   
Sbjct: 186 NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLAS 245

Query: 262 ------NI------------LIRS-YNQ-----------LGQCDVAMEMVKRMESLGITP 291
                 N+            LI+S Y+Q             +C   M   +++      P
Sbjct: 246 VLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNP 305

Query: 292 DVFTWTCMISGFA-QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           D+  W  MISG++     + +AL+ F+++  VG  P+  ++   ISAC+++ + + G ++
Sbjct: 306 DLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQV 365

Query: 351 HSLAVKMGF-TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           H LA+K+   ++ + V N+LI MYSKC  L  A+ +FD + + +  S+NSMIAGY Q G 
Sbjct: 366 HGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGM 425

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
             ++  LF +M E D  P  IT+  +++     G  ++    F  M +   ++     ++
Sbjct: 426 GFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFS 485

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            +I     LG+        R +++  F P      ++L AC
Sbjct: 486 CMI---DLLGRAGKLSEAERLIETIPFDPGFFXWSALLGAC 523



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 198/440 (45%), Gaps = 49/440 (11%)

Query: 72  SIHLARKLHAFLNLVTEIDVFVKT--KLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAM 128
           ++ L R+LHA L++VT +D +V     L++ Y+K G L +AR +F  + E R+  +W++M
Sbjct: 153 NVGLIRQLHA-LSVVTGLDSYVSVGNALITSYSKNGFLKEARRIFHWLSEDRDEVSWNSM 211

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM 188
           + AY + +   + +EL+  M   GL  D F    +L A  N  D   G   H+ +IK G 
Sbjct: 212 VVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGY 271

Query: 189 SCVRRVRNSVLAVYVKCGK-LIWARRFFESMDEKDGVAWNSMISGYFQIGE-NDEAHRLF 246
                V + ++ +Y KCG  ++  R+ F+ +   D V WN+MISGY    + +DEA   F
Sbjct: 272 HQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTMISGYSLYEDLSDEALECF 331

Query: 247 DKM------------------CRE-------------EIKLGVVT-----FNILIRSYNQ 270
            ++                  C                +KL + +      N LI  Y++
Sbjct: 332 RQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSK 391

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G    A  +   M       +  ++  MI+G+AQ+G   Q+L LF+ M  +   P  +T
Sbjct: 392 CGNLRDAKTLFDTMPE----HNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNIT 447

Query: 331 ITSAISACTDLKALAMG-MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
             S ++AC     +  G +  + +  K G   +    + +I++  +  +L  AER+ + I
Sbjct: 448 FISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERLIETI 507

Query: 390 K-DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
             D   + W++++      G    A +   ++ + D P N   + +L + Y  NG   +A
Sbjct: 508 PFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLD-PLNAAPYVMLANIYSDNGRLQDA 566

Query: 449 VDLFQRMGKNDKVKRNTASW 468
             + + M      K+   SW
Sbjct: 567 ASVRKLMRDRGVKKKPGCSW 586



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 122/256 (47%), Gaps = 7/256 (2%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID---VFVKT 95
           +EA+     +   G +    + + ++ AC + +S    R++H  L L  +I    + V  
Sbjct: 325 DEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHG-LALKLDIPSNRISVNN 383

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            L+++Y+KCG L DA+ +F+ M E N  ++++MI  Y++     + + LF  M++    P
Sbjct: 384 ALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTP 443

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVI-KLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            +  F  +L AC + G  E GK+  +++  K G+       + ++ +  + GKL  A R 
Sbjct: 444 TNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLGRAGKLSEAERL 503

Query: 215 FESMDEKDG-VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            E++    G   W++++      G  + A +  +++ + +  L    + +L   Y+  G+
Sbjct: 504 IETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLD-PLNAAPYVMLANIYSDNGR 562

Query: 274 CDVAMEMVKRMESLGI 289
              A  + K M   G+
Sbjct: 563 LQDAASVRKLMRDRGV 578


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 236/795 (29%), Positives = 379/795 (47%), Gaps = 90/795 (11%)

Query: 151 DGLFP--DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           D + P  D   +  +L+ C    D  + K +H  ++K G        N +L  YVK G  
Sbjct: 41  DSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD 100

Query: 209 IWARRFFESMDEKDGVAWNSMISGYF---QIGENDEAHR---------------LFDKMC 250
             A   F+ M E++ V++ ++  GY     IG     HR               LF  + 
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLD 160

Query: 251 REEI---------KLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
           + EI         KLG          LI +Y+  G  D A  + + +    +  D+  W 
Sbjct: 161 KAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGI----LCKDIVVWA 216

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            ++S + +NG    +L L   M   G MPN  T  +A+ A   L A      +H   +K 
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            +  D  VG  L+ +Y++  ++  A +VF+ +   DV  W+ MIA +CQ G+C +A +LF
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336

Query: 418 IKMQESDVPPNVITWNVLISG--------------------------YIQNG-------- 443
           I+M+E+ V PN  T + +++G                          Y+ N         
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC 396

Query: 444 -NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
              D AV LF  +       +N  SWN++I GY+ LG+   A  +FR+   +      VT
Sbjct: 397 EKMDTAVKLFAELS-----SKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVT 451

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
             S L ACA L + +   ++HG  ++ +    + V NSLID YAK G+I +++++F+ M 
Sbjct: 452 FSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME 511

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
           + D+ +WN+LI GY  HG    AL + D MK    KPN  TFL ++   S AG++D G++
Sbjct: 512 TIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQE 571

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F S+   + I P +EHY+ M+ L GRSG+L++AM+ IE +P EP   IW A+L+A    
Sbjct: 572 CFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQ 631

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
            N + A  + E +  + P D     L+  +YA   +  +   +RK  +E   +   G  W
Sbjct: 632 NNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSW 691

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSG---------LCIEEEEKE 793
           IE +  V+ F  G        L+   L    E +  +++ +G         L +++EEK+
Sbjct: 692 IEHQGDVHYFSVGLSDHPDMKLINGML----EWLNMKATRAGYVPDRNAVLLDMDDEEKD 747

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
           +   +HSE+LALA+ L+    + + I I+KN+R+C  CH   K +S +   ++ + D   
Sbjct: 748 KRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNR 807

Query: 854 LHHFKNGQCSCGDYW 868
            HHF  G CSCGD+W
Sbjct: 808 FHHFHAGVCSCGDHW 822



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 149/584 (25%), Positives = 263/584 (45%), Gaps = 76/584 (13%)

Query: 58  NTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           + Y  +L+ CI  N    A+ +H   L   + +D+F    LL+ Y K G   DA  +F++
Sbjct: 50  HAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDE 109

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M ERN  ++  +   Y+     ++ + L+  + ++G   +  +F   L+   +    E  
Sbjct: 110 MPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEIC 165

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
             +HS ++KLG      V  +++  Y  CG +  AR  FE +  KD V W  ++S Y + 
Sbjct: 166 PWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVEN 225

Query: 237 GENDEAHRL---------------FDKMCREEIKLGVVTFNI------------------ 263
           G  +++ +L               FD   +  I LG   F                    
Sbjct: 226 GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG 285

Query: 264 --LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
             L++ Y QLG    A ++   M       DV  W+ MI+ F QNG  ++A+DLF  M  
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPK----NDVVPWSFMIARFCQNGFCNEAVDLFIRMRE 341

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
             V+PN  T++S ++ C   K   +G ++H L VK+GF  D+ V N+LI++Y+KCE+++ 
Sbjct: 342 AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN-------- 433
           A ++F  +  K+  SWN++I GY   G  GKA+ +F +   + V    +T++        
Sbjct: 402 AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS 461

Query: 434 -------VLISGYIQNGNEDEAV-------DLFQRMGK--------NDKVKRNTASWNSL 471
                  V + G     N  + V       D++ + G         N+    + ASWN+L
Sbjct: 462 LASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNAL 521

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR-RS 530
           I+GY   G    AL +   M+     PN +T L VL  C+     ++ +E    ++R   
Sbjct: 522 ISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHG 581

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLI 573
           +E  L     ++    +SG +  +  + +G+     ++ W +++
Sbjct: 582 IEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAML 625


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 209/619 (33%), Positives = 330/619 (53%), Gaps = 41/619 (6%)

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
           +  + F W  MI G+A N   S+AL L+ +M   G  P+  T    + AC DL    MG 
Sbjct: 85  VLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGR 144

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           ++H+L V  G  +DV VGNS+++MY K  ++EAA  VFD +  +D+ SWN+M++G+ + G
Sbjct: 145 KVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNG 204

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLIS---------------GYIQNGNED------- 446
               A+E+F  M+      +  T   L+S               GY+    E        
Sbjct: 205 EARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGF 264

Query: 447 ------------EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
                       E+V   +++ +  +VK +  SWNSLI+GY++ G    AL +F +M   
Sbjct: 265 LMNSIIDMYCNCESVSCARKLFEGLRVK-DVVSWNSLISGYEKCGDAFQALELFGRMVVV 323

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              P+ VT++SVL AC  + A      +   V++R    ++ V  +LI  YA  G++V +
Sbjct: 324 GAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCA 383

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
             +FD M  K++     ++ G+ +HG    A+ +F +M   G+ P+ G F +++ A S +
Sbjct: 384 CRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHS 443

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G+VD GK++F  +T  Y + P   HYS ++DL GR+G L+EA   IE+M ++P+  +W A
Sbjct: 444 GLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTA 503

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           LL+ACR+H N+ LAV++ ++LF+L P  V     +  IYA   + ED   VR L  +   
Sbjct: 504 LLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRL 563

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEE 789
           R      ++E+  +V+ F  G  S   SD +Y+ L+++ E +               +EE
Sbjct: 564 RKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKPDTSLVLYDVEE 623

Query: 790 EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
           E KE++   HSE+LALAFALI +     TIRI KN+R+C  CH   K +S + + EI + 
Sbjct: 624 EIKEKMLWDHSERLALAFALINTGPGT-TIRITKNLRVCGDCHTVIKMISKLTNREIIMR 682

Query: 850 DSKCLHHFKNGQCSCGDYW 868
           D    HHF++G CSCG YW
Sbjct: 683 DICRFHHFRDGLCSCGGYW 701



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 242/485 (49%), Gaps = 39/485 (8%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
            LLQ+  +S S+  A +LHA +     +  + ++ TKL + YA CG +  A+ +F+ +  
Sbjct: 27  TLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVL 86

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           +N + W++MI  Y+ +      + L+  M+  G  PD+F +P +L+ACG+    E G+ +
Sbjct: 87  KNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKV 146

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H+LV+  G+     V NS+L++Y K G +  AR  F+ M  +D  +WN+M+SG+ + GE 
Sbjct: 147 HALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEA 206

Query: 240 DEAHRLFDKMCRE--------------------EIKLGVVTFNILIRSYNQLGQCD---- 275
             A  +F  M R+                    ++K+G      ++R+      C+    
Sbjct: 207 RGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLM 266

Query: 276 -VAMEMVKRMESLGIT---------PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
              ++M    ES+             DV +W  +ISG+ + G   QAL+LF  M  VG +
Sbjct: 267 NSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAV 326

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P+ VT+ S ++AC  + AL +G  + S  VK G+  +V+VG +LI MY+ C  L  A RV
Sbjct: 327 PDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRV 386

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
           FD + +K++ +   M+ G+   G   +A  +F +M    V P+   +  ++S    +G  
Sbjct: 387 FDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLV 446

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           DE  ++F +M ++  V+     ++ L+    + G  + A  V   M+     PN     +
Sbjct: 447 DEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMK---LKPNEDVWTA 503

Query: 506 VLPAC 510
           +L AC
Sbjct: 504 LLSAC 508



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 15/203 (7%)

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
           +L  +  +   L   YA  G++ Y++ IFD +  K+   WNS+I GY  +     AL L+
Sbjct: 53  TLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLY 112

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH----YSAMID 645
            +M  FG KP+  T+  ++ A     + ++G+KV   +     ++  +E      ++++ 
Sbjct: 113 LKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALV-----VVGGLEEDVYVGNSILS 167

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL-EPGDVL 704
           +Y + G +E A    + M +  D + W  +++    +G    A  A E   D+   G V 
Sbjct: 168 MYFKFGDVEAARVVFDRMLVR-DLTSWNTMMSGFVKNGE---ARGAFEVFGDMRRDGFVG 223

Query: 705 IQRLILQIYAICGKPEDALKVRK 727
            +  +L + + CG   D LKV K
Sbjct: 224 DRTTLLALLSACGDVMD-LKVGK 245


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 217/627 (34%), Positives = 331/627 (52%), Gaps = 54/627 (8%)

Query: 295 TWTCMISGFAQNGRTSQALDLFKEM--SFVGVMPNGV--TITSAISACTDLKALAMGMEI 350
           +W   I   A  G    A+ LF  M  S      + V  ++  A+ +C  L   A+G  +
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEE--------------LEAAERVFDMIKDKDVYS 396
           H+LA++ G   D    N+L+N+Y K                 LE+  +VFD + +KDV S
Sbjct: 81  HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ--------------- 441
           WN+++ G  ++G  G+A  L  +M      P+  T + ++  + +               
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFAT 200

Query: 442 -NGNEDEA------VDLFQRMGKND-KVK-------RNTASWNSLIAGYQQLGQKNNALG 486
            NG  D+       +D++    + D  VK       R+   WNS++AG  Q G  + ALG
Sbjct: 201 RNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALG 260

Query: 487 VFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
           +FR+M  S   P  VT  S++PAC  L +    K++H  V+R   + ++ + +SLID Y 
Sbjct: 261 LFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYC 320

Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
           K GN+  +R IFD + S DI++W ++I G+ LHG    AL LFD+M+   LKPN  TFL+
Sbjct: 321 KCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLA 380

Query: 607 IILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
           ++ A S AG+VD G K F S+++ Y I+P +EH++A+ D  GR GKLEEA  FI  M I+
Sbjct: 381 VLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKIK 440

Query: 667 PDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR 726
           P +S+W  LL AC++H N  LA    +++FDLEP  +    ++   Y+  G+  +A  +R
Sbjct: 441 PTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEAAHLR 500

Query: 727 KLERENTRRNSFGQCWIEVKNLVYTFV----TGGWSESYSDLLYSWL-QNVPENVTARSS 781
           K  R+   +      WIEVKN  + FV    +  W E   D L  +  Q V +     + 
Sbjct: 501 KSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYERIIDALNVFSEQMVRQGYVPNTD 560

Query: 782 HSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMM 841
                IEEE+K  +   HSEKLA+ F +I S+    TIR++KN+R+CV CH   K++S +
Sbjct: 561 DVFQDIEEEQKNSVLCGHSEKLAIVFGII-STPPGTTIRVMKNLRVCVDCHTVTKFISKI 619

Query: 842 HHCEIFLADSKCLHHFKNGQCSCGDYW 868
              EI + D+   HHFK+G CSCGD+W
Sbjct: 620 VGREIVMRDANRFHHFKDGICSCGDFW 646



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 155/341 (45%), Gaps = 45/341 (13%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK------------ 207
            P  L++C   G    G  +H+L ++ G    R   N++L +Y K               
Sbjct: 61  LPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSA 120

Query: 208 --LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
             L   R+ F+ M EKD V+WN+++ G  + G + EA  L  +M R+  K    T + ++
Sbjct: 121 VVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVL 180

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFT------------------------------ 295
             + +       ME+       G   DVF                               
Sbjct: 181 PIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAI 240

Query: 296 -WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
            W  M++G AQNG   +AL LF+ M   G+ P  VT +S I AC +L +L +G ++H+  
Sbjct: 241 LWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYV 300

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           ++ GF  +V + +SLI+MY KC  +  A R+FD I+  D+ SW +MI G+   G   +A 
Sbjct: 301 IRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREAL 360

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
            LF +M+  ++ PN IT+  +++     G  D+    F  M
Sbjct: 361 VLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSM 401



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 158/336 (47%), Gaps = 32/336 (9%)

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
           V +E V+++       DV +W  ++ G A++GR  +AL L +EM   G  P+  T++S +
Sbjct: 121 VVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVL 180

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
               +   +  GME+H  A + GF DDV VG+SLI+MY+ C   + + +VFD +  +D  
Sbjct: 181 PIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAI 240

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS---------------GYI 440
            WNSM+AG  Q G   +A  LF +M  S + P  +T++ LI                 Y+
Sbjct: 241 LWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYV 300

Query: 441 QNGNED-------EAVDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNAL 485
             G  D         +D++ + G     +R        +  SW ++I G+   G    AL
Sbjct: 301 IRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREAL 360

Query: 486 GVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV-KEIHGCVLRRSLESSLPVMNSLIDT 544
            +F +M+     PN +T L+VL AC++    +K  K  +       +  SL    +L DT
Sbjct: 361 VLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADT 420

Query: 545 YAKSGNIVYSRTIFDGMSSKDIIT-WNSLICGYVLH 579
             + G +  +     GM  K   + W++L+    +H
Sbjct: 421 LGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVH 456



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 188/457 (41%), Gaps = 57/457 (12%)

Query: 64  LQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGC--------------LD 108
           L++C       L   LHA  L      D F    LL++Y K                 L+
Sbjct: 65  LKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLE 124

Query: 109 DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACG 168
             R+VF++M E+++ +W+ ++   +   R  E + L   M +DG  PD F    +L    
Sbjct: 125 SVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFA 184

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
              D   G  +H    + G      V +S++ +Y  C +  ++ + F+++  +D + WNS
Sbjct: 185 EGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNS 244

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS--------------------- 267
           M++G  Q G  DEA  LF +M    IK   VTF+ LI +                     
Sbjct: 245 MLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGG 304

Query: 268 --------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
                         Y + G   +A  +  R++S    PD+ +WT MI G A +G   +AL
Sbjct: 305 FDGNVFISSSLIDMYCKCGNVSIARRIFDRIQS----PDIVSWTAMIMGHALHGPAREAL 360

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFTDDVLVGNSLINM 372
            LF  M    + PN +T  + ++AC+    +  G +  +S++   G    +    +L + 
Sbjct: 361 VLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADT 420

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
             +  +LE A      +K K   S  S +   C+        E   K +  D+ P  +  
Sbjct: 421 LGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAK-KIFDLEPRSMGS 479

Query: 433 NVLISG-YIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           ++++S  Y  +G  +EA  L + M K    K    SW
Sbjct: 480 HIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSW 516



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 146/318 (45%), Gaps = 5/318 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           +GR  EA+ ++  +   G K    T  ++L    +   +    +LH F        DVFV
Sbjct: 151 SGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFV 210

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YA C   D + +VF+++  R+   W++M+   +++    E + LF  M+  G+
Sbjct: 211 GSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGI 270

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P    F  ++ ACGN      GK +H+ VI+ G      + +S++ +Y KCG +  ARR
Sbjct: 271 KPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARR 330

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ +   D V+W +MI G+   G   EA  LFD+M    +K   +TF  ++ + +  G 
Sbjct: 331 IFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHAGL 390

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            D   +    M +  GI P +     +     + G+  +A +    M    + P     +
Sbjct: 391 VDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMK---IKPTASVWS 447

Query: 333 SAISACTDLKALAMGMEI 350
           + + AC   K   +  E+
Sbjct: 448 TLLRACKVHKNTVLAEEV 465


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 221/647 (34%), Positives = 331/647 (51%), Gaps = 70/647 (10%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGME 349
           P+++ W  +I G+A +   +Q+  +F  M       PN  T      A + LK L +G  
Sbjct: 135 PNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSV 194

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H + +K   + D+ + NSLIN Y      + A RVF  +  KDV SWN+MI  +   G 
Sbjct: 195 LHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGL 254

Query: 410 CGKAYELFIKMQESDVPPNVIT------------------W-----------------NV 434
             KA  LF +M+  DV PNVIT                  W                 N 
Sbjct: 255 PDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNA 314

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVK--------------------------RNTASW 468
           ++  Y++ G  ++A DLF +M + D V                           + TA+W
Sbjct: 315 MLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAW 374

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQ-SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           N+LI+ Y+Q G+   AL +F +MQ S    P+ VT++  L A A L A +    IH  + 
Sbjct: 375 NALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIK 434

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           +  +  +  +  SL+D YAK GN+  +  +F  +  KD+  W+++I    ++G   AALD
Sbjct: 435 KHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALD 494

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           LF  M    +KPN  TF +I+ A + AG+V+ G+++F  +   Y I+P I+HY  ++D++
Sbjct: 495 LFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIF 554

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           GR+G LE+A  FIE MPI P +++W ALL AC  HGN++LA LA + L +LEP +     
Sbjct: 555 GRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFV 614

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
           L+  IYA  G  E    +RKL R++  +       I+V  +V+ F+ G  S  +S  +YS
Sbjct: 615 LLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFLVGDNSHPFSQKIYS 674

Query: 768 WLQNVPEN---VTARSSHSGLCIEEEEK---EEISGIHSEKLALAFALIGSSQAPHTIRI 821
            L  + E    +  +   S L    EE    E+   +HSEKLA+AF LI S+ +   IRI
Sbjct: 675 KLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAFGLI-STASSQPIRI 733

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           VKNIR+C  CH  AK VS ++  +I L D    HHF+ G+CSC DYW
Sbjct: 734 VKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 204/472 (43%), Gaps = 70/472 (14%)

Query: 51  QGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYA--KCGCL 107
           +G +V     +  +  C  +N++ L +++HA +   +   D +  +KLL+ YA   C CL
Sbjct: 66  KGNEVESTNILEFIDQC--TNTMQL-KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCL 122

Query: 108 DDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD-GLFPDDFLFPKILQA 166
             A+ VF  + + NLY W+ +I  Y+      +   +F  M+     FP+ F FP + +A
Sbjct: 123 IYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKA 182

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
                    G ++H +VIK  +S    + NS++  Y   G    A R F +M  KD V+W
Sbjct: 183 ASRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSW 242

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------------- 261
           N+MI+ +   G  D+A  LF +M  +++K  V+T                          
Sbjct: 243 NAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIEN 302

Query: 262 ----------NILIRSYNQLGQCDVAMEMVKRMESLGIT--------------------- 290
                     N ++  Y + G  + A ++  +M    I                      
Sbjct: 303 NGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCI 362

Query: 291 ----PDVFT--WTCMISGFAQNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKA 343
               P  +T  W  +IS + QNG+   AL LF EM       P+ VT+  A+ A   L A
Sbjct: 363 FDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGA 422

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           +  G  IH    K     +  +  SL++MY+KC  L  A  VF  ++ KDVY W++MI  
Sbjct: 423 IDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGA 482

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
               G    A +LF  M E+ + PN +T+  ++      G  +E   LF++M
Sbjct: 483 LAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQM 534


>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g46790, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
 gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
 gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
 gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 214/650 (32%), Positives = 335/650 (51%), Gaps = 49/650 (7%)

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           T N L RS  +   C VA+         G      +   +I    + G+  QA+ +  + 
Sbjct: 16  TVNFLPRSPLKPPSCSVALNNPSISSGAGAK---ISNNQLIQSLCKEGKLKQAIRVLSQE 72

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
           S     P+  T    I  C    +L+  + +H   +  G   D  +   LI MYS    +
Sbjct: 73  S----SPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSV 128

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG- 438
           + A +VFD  + + +Y WN++      AG+  +   L+ KM    V  +  T+  ++   
Sbjct: 129 DYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKAC 188

Query: 439 --------YIQNGNEDEA-----------------VDLFQRMGKNDKVK--------RNT 465
                   ++  G E  A                 VD++ R G  D           RN 
Sbjct: 189 VASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNV 248

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKM--QSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
            SW+++IA Y + G+   AL  FR+M  ++    PN VT++SVL ACA L A  + K IH
Sbjct: 249 VSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIH 308

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
           G +LRR L+S LPV+++L+  Y + G +   + +FD M  +D+++WNSLI  Y +HG+  
Sbjct: 309 GYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGK 368

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            A+ +F++M + G  P   TF+S++ A S  G+V+ GK++F ++   + I P IEHY+ M
Sbjct: 369 KAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACM 428

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           +DL GR+ +L+EA + ++DM  EP   +W +LL +CRIHGN++LA  A  RLF LEP + 
Sbjct: 429 VDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNA 488

Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
               L+  IYA     ++  +V+KL      +   G+CW+EV+  +Y+FV+        +
Sbjct: 489 GNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLME 548

Query: 764 LLYSWLQNVPENVTAR---SSHSGLC--IEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
            ++++L  + E++  +       G+   +E EEKE I   HSEKLALAF LI +S+    
Sbjct: 549 QIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKG-EP 607

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IRI KN+R+C  CH   K++S     EI + D    H FKNG CSCGDYW
Sbjct: 608 IRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 145/276 (52%), Gaps = 8/276 (2%)

Query: 52  GAKVRRNTYINLLQACIDS----NSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGC 106
           G +  R TY  +L+AC+ S    N +   +++HA L        V++ T L+ +YA+ GC
Sbjct: 173 GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC 232

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL--FPDDFLFPKIL 164
           +D A  VF  M  RN+ +WSAMI  Y+++ +  E +  F  M+++     P+      +L
Sbjct: 233 VDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVL 292

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
           QAC +    E GKL+H  +++ G+  +  V ++++ +Y +CGKL   +R F+ M ++D V
Sbjct: 293 QACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVV 352

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           +WNS+IS Y   G   +A ++F++M         VTF  ++ + +  G  +    + + M
Sbjct: 353 SWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETM 412

Query: 285 -ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
               GI P +  + CM+    +  R  +A  + ++M
Sbjct: 413 WRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 194/419 (46%), Gaps = 53/419 (12%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           LC  G+L +AI VL    +Q +   + TY  L+  C   +S+  A ++H   L+  ++ D
Sbjct: 56  LCKEGKLKQAIRVL----SQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQD 111

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            F+ TKL+ +Y+  G +D AR+VF+  R+R +Y W+A+  A +      EV+ L++ M +
Sbjct: 112 PFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNR 171

Query: 151 DGLFPDDFLFPKILQAC--GNC--GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            G+  D F +  +L+AC    C       GK +H+ + + G S    +  +++ +Y + G
Sbjct: 172 IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFG 231

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE------------- 253
            + +A   F  M  ++ V+W++MI+ Y + G+  EA R F +M RE              
Sbjct: 232 CVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSV 291

Query: 254 --------------------IKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
                               ++ G    +   + L+  Y + G+ +V   +  RM     
Sbjct: 292 LQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDR-- 349

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             DV +W  +IS +  +G   +A+ +F+EM   G  P  VT  S + AC+    +  G  
Sbjct: 350 --DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407

Query: 350 I-HSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           +  ++    G    +     ++++  +   L EAA+ V DM  +     W S++ G C+
Sbjct: 408 LFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL-GSCR 465



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 93/393 (23%), Positives = 171/393 (43%), Gaps = 40/393 (10%)

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P    +  ++  CG+         +H  ++  G      +   ++ +Y   G + +AR+ 
Sbjct: 75  PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR-------S 267
           F+   ++    WN++       G  +E   L+ KM R  ++    T+  +++       +
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194

Query: 268 YNQLGQC-DVAMEMVKRMES-------------------------LGITP--DVFTWTCM 299
            N L +  ++   + +R  S                          G  P  +V +W+ M
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254

Query: 300 ISGFAQNGRTSQALDLFKEM--SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           I+ +A+NG+  +AL  F+EM        PN VT+ S + AC  L AL  G  IH   ++ 
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           G    + V ++L+ MY +C +LE  +RVFD + D+DV SWNS+I+ Y   GY  KA ++F
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
            +M  +   P  +T+  ++      G  +E   LF+ M ++  +K     +  ++     
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMV---DL 431

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           LG+ N      + +Q     P      S+L +C
Sbjct: 432 LGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSC 464


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 215/650 (33%), Positives = 344/650 (52%), Gaps = 56/650 (8%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+  Y +      A  + +RM +     DV  W  M++G+A +G+ S  +     M    
Sbjct: 170 LVDVYAKCASFRHAATVFRRMPAR----DVVAWNAMLAGYALHGKYSDTIACLLLMQ-DD 224

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKM----GFTDDVLVGNSLINMYSKCEEL 379
             PN  T+ + +       AL+ G  +H+ +V+        D VLVG +L++MY+KC  L
Sbjct: 225 HAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHL 284

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM------------------- 420
             A RVF+ +  ++  +W++++ G+   G   +A+ LF  M                   
Sbjct: 285 VYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRA 344

Query: 421 -----------------QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
                             +S +  ++   N L+S Y + G  D+A  LF +M     V +
Sbjct: 345 CANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQM-----VVK 399

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           +T S+++L++GY Q G+ + A  VFRKMQ+    P+  T++S++PAC++L A    K  H
Sbjct: 400 DTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGH 459

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
           G V+ R + S   + N+LID YAK G I  SR IFD M ++DI++WN++I GY +HG   
Sbjct: 460 GSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGK 519

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            A  LF  MK    +P+  TF+ +I A S +G+V  GK+ F  +   Y I P +EHY  M
Sbjct: 520 EATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGM 579

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           +DL  R G L+EA +FI+ MP++ D  +W ALL ACR+H NIDL       +  L P   
Sbjct: 580 VDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLGPEGT 639

Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
               L+  I++  G+ ++A +VR +++E   + S G  WIE+   ++ F+ G  S + S 
Sbjct: 640 GNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSHAQSS 699

Query: 764 LLYSWLQNVPENVTA---RSSHSGLCIEEEEKEEISGI--HSEKLALAFALIGSSQAPHT 818
            +Y  L N+  ++     R+  S +  + EE+E+   +  HSEKLA+AF ++  S+   T
Sbjct: 700 EIYQELDNILVDINKLGYRADTSFVLQDVEEEEKEKALLYHSEKLAIAFGVLTLSE-DKT 758

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           I + KN+R+C  CH   KY++++    I + D+   HHFKNGQCSCGD+W
Sbjct: 759 IFVTKNLRVCGDCHTVIKYMTLVRKRAIIVRDANRFHHFKNGQCSCGDFW 808



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 200/442 (45%), Gaps = 52/442 (11%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  +L+AC     +  AR +H          D+FV T L+ VYAKC     A  VF  M
Sbjct: 131 TFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRM 190

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             R++  W+AM+  Y+   ++ + +    LM QD   P+      +L      G    G+
Sbjct: 191 PARDVVAWNAMLAGYALHGKYSDTIACLLLM-QDDHAPNASTLVALLPLLAQHGALSQGR 249

Query: 178 LMHSLVIKLGMSCVRR-------VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
            +H+  ++   +C          V  ++L +Y KCG L++A R FE+M  ++ V W++++
Sbjct: 250 AVHAYSVR---ACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALV 306

Query: 231 SGYFQIGENDEAHRLFDKM------------------------------------CREEI 254
            G+   G   EA  LF  M                                     +  +
Sbjct: 307 GGFVLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGL 366

Query: 255 KLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
              +   N L+  Y + G  D A  +  +M    +  D  +++ ++SG+ QNG+  +A  
Sbjct: 367 HTDLTAGNSLLSMYAKAGLIDQATTLFDQM----VVKDTVSYSALVSGYVQNGKADEAFR 422

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
           +F++M    V P+  T+ S I AC+ L AL  G   H   +  G   +  + N+LI+MY+
Sbjct: 423 VFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYA 482

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           KC  ++ + ++FD++  +D+ SWN+MIAGY   G   +A  LF+ M+     P+ +T+  
Sbjct: 483 KCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFIC 542

Query: 435 LISGYIQNGNEDEAVDLFQRMG 456
           LIS    +G   E    F  M 
Sbjct: 543 LISACSHSGLVTEGKRWFHMMA 564



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 152/595 (25%), Positives = 262/595 (44%), Gaps = 84/595 (14%)

Query: 104 CGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKI 163
           CG L  AR +F+ +    ++ ++A+I AYS       +     L  +    P+++ FP +
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG 223
           L+AC    D  + + +H    + G+     V  +++ VY KC     A   F  M  +D 
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195

Query: 224 VAWNSMISGYFQIG------------ENDEA-------------------------HRLF 246
           VAWN+M++GY   G            ++D A                         H   
Sbjct: 196 VAWNAMLAGYALHGKYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYS 255

Query: 247 DKMCR-EEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ 305
            + C   + K GV+    L+  Y + G    A  +    E++ +  +V TW+ ++ GF  
Sbjct: 256 VRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRV---FEAMAVRNEV-TWSALVGGFVL 311

Query: 306 NGRTSQALDLFKEMSFVGV-MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
            GR  +A  LFK+M   G+   +  ++ SA+ AC +L  L +G ++H+L  K G   D+ 
Sbjct: 312 CGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLT 371

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
            GNSL++MY+K   ++ A  +FD +  KD  S++++++GY Q G   +A+ +F KMQ  +
Sbjct: 372 AGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACN 431

Query: 425 VPPNVITWNVLIS-----GYIQNGNEDEA-----------------VDLFQRMGKNDKVK 462
           V P+V T   LI        +Q+G                      +D++ + G+ D  +
Sbjct: 432 VQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSR 491

Query: 463 --------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY-- 512
                   R+  SWN++IAGY   G    A  +F  M+     P+ VT + ++ AC++  
Sbjct: 492 QIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSG 551

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNS 571
           LV   K +  H    +  +   +     ++D  A+ G +  +     GM  K D+  W +
Sbjct: 552 LVTEGK-RWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGA 610

Query: 572 LICGYVLHGFWHAALDLFDQMKSF--GLKP-NRGTFLSIILAHSLAGMVDLGKKV 623
           L+    +    H  +DL  Q+ S    L P   G F+ +    S AG  D   +V
Sbjct: 611 LLGACRV----HKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEV 661



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 178/395 (45%), Gaps = 54/395 (13%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEID-----VFVKTKLLSVYAKCGCLDDARE 112
           +T + LL       ++   R +HA+      +      V V T LL +YAKCG L  A  
Sbjct: 230 STLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASR 289

Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFP----KILQACG 168
           VFE M  RN  TWSA++G +    R  E   LF  M+  GL    FL P      L+AC 
Sbjct: 290 VFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLC---FLSPTSVASALRACA 346

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
           N  D   GK +H+L+ K G+       NS+L++Y K G +  A   F+ M  KD V++++
Sbjct: 347 NLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSA 406

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------------------------- 261
           ++SGY Q G+ DEA R+F KM    ++  V T                            
Sbjct: 407 LVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRG 466

Query: 262 --------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
                   N LI  Y + G+ D++ ++   M +     D+ +W  MI+G+  +G   +A 
Sbjct: 467 IASETSICNALIDMYAKCGRIDLSRQIFDVMPAR----DIVSWNTMIAGYGIHGLGKEAT 522

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFTDDVLVGNSLINM 372
            LF +M      P+ VT    ISAC+    +  G    H +A K G T  +     ++++
Sbjct: 523 ALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDL 582

Query: 373 YSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQ 406
            ++   L EA + +  M    DV  W +++ G C+
Sbjct: 583 LARGGFLDEAYQFIQGMPLKADVRVWGALL-GACR 616



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 172/363 (47%), Gaps = 13/363 (3%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYI-NLLQACIDSNSIHLARKLHAFLNLV-TEIDVFV 93
           GR+ EA ++   +  QG      T + + L+AC + + + L ++LHA L       D+  
Sbjct: 313 GRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTA 372

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              LLS+YAK G +D A  +F+ M  ++  ++SA++  Y ++ +  E   +F  M    +
Sbjct: 373 GNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNV 432

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD      ++ AC +    + GK  H  VI  G++    + N+++ +Y KCG++  +R+
Sbjct: 433 QPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQ 492

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M  +D V+WN+MI+GY   G   EA  LF  M  +  +   VTF  LI + +  G 
Sbjct: 493 IFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGL 552

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
                     M    GITP +  +  M+   A+ G   +A    + M     +   V + 
Sbjct: 553 VTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMP----LKADVRVW 608

Query: 333 SA-ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDMI 389
            A + AC   K + +G ++ S+  ++G       GN ++  N++S     + A  V  + 
Sbjct: 609 GALLGACRVHKNIDLGKQVSSMIQQLGPEG---TGNFVLLSNIFSAAGRFDEAAEVRIIQ 665

Query: 390 KDK 392
           K++
Sbjct: 666 KEQ 668



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 98/453 (21%), Positives = 176/453 (38%), Gaps = 104/453 (22%)

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--- 432
           C +L  A  +FD I    ++ +N++I  Y   G            +     PN  T+   
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 433 --------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDK 460
                                             L+  Y +  +   A  +F+RM   D 
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195

Query: 461 VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
           V     +WN+++AGY   G+ ++ +     MQ     PN  T++++LP  A   A ++ +
Sbjct: 196 V-----AWNAMLAGYALHGKYSDTIACLLLMQDD-HAPNASTLVALLPLLAQHGALSQGR 249

Query: 521 EIHGCVLR----RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
            +H   +R       +  + V  +L+D YAK G++VY+  +F+ M+ ++ +TW++L+ G+
Sbjct: 250 AVHAYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGF 309

Query: 577 VLHGFWHAALDLFDQMKSFG---LKPNR----------------GTFLSIILAHS----- 612
           VL G    A  LF  M + G   L P                  G  L  +LA S     
Sbjct: 310 VLCGRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTD 369

Query: 613 ------------LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
                        AG++D    +F  +     ++     YSA++  Y ++GK +EA    
Sbjct: 370 LTAGNSLLSMYAKAGLIDQATTLFDQM-----VVKDTVSYSALVSGYVQNGKADEAFRVF 424

Query: 661 EDMP---IEPDSSIWEALLTACR-----IHGNIDLAVLAIERLFDLEPGDVLIQRLILQI 712
             M    ++PD +   +L+ AC       HG      + +  +      +  I   ++ +
Sbjct: 425 RKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGI----ASETSICNALIDM 480

Query: 713 YAICGKPE------DALKVRKLERENTRRNSFG 739
           YA CG+ +      D +  R +   NT    +G
Sbjct: 481 YAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYG 513


>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 643

 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 204/600 (34%), Positives = 322/600 (53%), Gaps = 18/600 (3%)

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP-NGVTITSAI 335
           A++  +R+      PDVF    +I G A++     +L  F EM      P +  +    +
Sbjct: 54  ALDYARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLL 113

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
            A    ++L  G+++H  A+  G    + VG +L++MYS+C  +  A++VF+ + + +V 
Sbjct: 114 KAAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVV 173

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           +WN+++    + G    A  +F +M       N+ +WNV+++GY + G  + A  LF  M
Sbjct: 174 AWNAVVTACFRCGDVKGADMMFNRMPFR----NLTSWNVMLAGYTKAGELELARKLFLEM 229

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
              D V     SW+++I G+   G    A G FR++Q     PN V++   L ACA   A
Sbjct: 230 PVKDDV-----SWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGA 284

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLIC 574
               K +HG + +      + V N+L+DTY+K GN+  +R +F+ M  K  I++W S+I 
Sbjct: 285 IEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIA 344

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
           G  +HG+   A+ LF +M+  G++P+   F+SI+ A S AG+++ G + F  + + Y I 
Sbjct: 345 GLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIE 404

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER 694
           P IEHY  M+DLYGR+G+L++A EFI  MP+ P + IW  LL AC IHGN+ LA    ER
Sbjct: 405 PAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKER 464

Query: 695 LFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           L +L+P +     L+  IYA+ GK +D   VR+   +     + G   IEV  ++Y+FV 
Sbjct: 465 LSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYSFVA 524

Query: 755 GGWSESYSDLLYSWLQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLALAFA 808
           G    S ++  Y  L+ +   +     +          IE+EEKE+    HSEKLA+AF 
Sbjct: 525 GEVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHDIEDEEKEDSVSRHSEKLAVAFG 584

Query: 809 LIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +    +    IRIVKN+R+C  CH   K +S ++  EI + D    H FK G CSC DYW
Sbjct: 585 IARLCKGS-IIRIVKNLRVCRDCHTVMKLISKVYGLEIVVRDRSRFHSFKTGSCSCRDYW 643



 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 224/455 (49%), Gaps = 19/455 (4%)

Query: 62  NLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLL--SVYAKCGCLDDAREVFEDMR 118
           +LL  C    S+   +++HA++     + D  +  KLL  S  +    LD AR +F    
Sbjct: 10  SLLTNC---RSLKNLKQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFP 66

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP-DDFLFPKILQACGNCGDFEAGK 177
             +++  + +I   +     +  +  F  M +    P D F F  +L+A  +    E+G 
Sbjct: 67  NPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGI 126

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H   I  G+     V  +++++Y +CG + +A++ FE M E + VAWN++++  F+ G
Sbjct: 127 QLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCG 186

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
           +   A  +F++M    +     ++N+++  Y + G+ ++A ++   M       D  +W+
Sbjct: 187 DVKGADMMFNRMPFRNL----TSWNVMLAGYTKAGELELARKLFLEMP----VKDDVSWS 238

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            MI GFA NG   +A   F+E+  VG+ PN V++T A+SAC D  A+  G  +H    K 
Sbjct: 239 TMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKS 298

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
           GF   V V N+L++ YSKC  +  A  VF+ M + + + SW SMIAG    GY  +A +L
Sbjct: 299 GFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQL 358

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F +M+ES + P+ I +  ++      G  ++  + F +M     ++     +  ++  Y 
Sbjct: 359 FHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYG 418

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           + GQ + A      M      P  +   ++L AC+
Sbjct: 419 RAGQLDKAYEFIIHMP---VLPTAIIWRTLLGACS 450



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 172/383 (44%), Gaps = 29/383 (7%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           +L+ Y K G L+ AR++F +M  ++  +WS MI  ++ +  + E    F  + Q G+ P+
Sbjct: 209 MLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPN 268

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           +      L AC + G  E GK++H  + K G   +  V N++L  Y KCG +  AR  FE
Sbjct: 269 EVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFE 328

Query: 217 SMDEKDG-VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
            M EK   V+W SMI+G    G  +EA +LF +M    I+   + F  ++ + +  G  +
Sbjct: 329 RMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIE 388

Query: 276 VAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
              E   +M+ +  I P +  + CM+  + + G+  +A +    M    V+P  +   + 
Sbjct: 389 KGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMP---VLPTAIIWRTL 445

Query: 335 ISACTDLKALAMGMEIHSLAVKM---GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           + AC+    + +   +     ++      D VL+ N +  +  K +++ A  R     + 
Sbjct: 446 LGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSN-IYAVAGKWKDVAAVRRSMTDQRM 504

Query: 392 KDVYSWN---------SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
                W+         S +AG  Q     +AYE   K++E  +   V    +   G + +
Sbjct: 505 NKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYE---KLKEIMLKLRVEGCYIPEVGSVLH 561

Query: 443 GNEDEAVDLFQRMGKNDKVKRNT 465
             EDE         K D V R++
Sbjct: 562 DIEDEE--------KEDSVSRHS 576



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 68/144 (47%), Gaps = 2/144 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFV 93
           NG   EA      +   G +    +    L AC D+ +I   + LH F+     +  V V
Sbjct: 247 NGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSV 306

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              LL  Y+KCG +  AR VFE M E R++ +W++MI   +      E ++LF  M + G
Sbjct: 307 NNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESG 366

Query: 153 LFPDDFLFPKILQACGNCGDFEAG 176
           + PD   F  IL AC + G  E G
Sbjct: 367 IRPDGIAFISILYACSHAGLIEKG 390


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 202/578 (34%), Positives = 312/578 (53%), Gaps = 37/578 (6%)

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P+     + +  CT L  L  G  +H   +   F  D+++ NSL+ MY++C  LE A R+
Sbjct: 72  PDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRL 131

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS--GYIQNG 443
           FD +  +D+ SW SMI GY Q      A  LF +M      PN  T + L+   GY+ + 
Sbjct: 132 FDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASY 191

Query: 444 N--------------------EDEAVDLFQRMGK-------NDKVK-RNTASWNSLIAGY 475
           N                        VD++ R G         DK+  +N  SWN+LIAGY
Sbjct: 192 NCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGY 251

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
            + G+   AL +F +MQ   + P   T  ++L +C+ +    + K +H  +++ S +   
Sbjct: 252 ARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVG 311

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            V N+L+  YAKSG+I  +  +FD +   D+++ NS++ GY  HG    A   FD+M  F
Sbjct: 312 YVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRF 371

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           G++PN  TFLS++ A S A ++D GK  F  +   Y I P + HY+ ++DL GR+G L++
Sbjct: 372 GIEPNDITFLSVLTACSHARLLDEGKHYF-GLMRKYNIEPKVSHYATIVDLLGRAGLLDQ 430

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A  FIE+MPIEP  +IW ALL A ++H N ++   A +R+F+L+P       L+  IYA 
Sbjct: 431 AKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLANIYAS 490

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN 775
            G+ ED  KVRK+ +++  +      W+EV+N V+ FV    +    + ++   + + + 
Sbjct: 491 AGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQKEKIHKMWEKLNQK 550

Query: 776 V-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
           +        +SH  L ++++EKE     HSEKLAL+FAL+ +     TIRI+KNIR+C  
Sbjct: 551 IKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGS-TIRIMKNIRVCGD 609

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   KYVS++   EI + D+   HHF +G CSCGDYW
Sbjct: 610 CHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/465 (24%), Positives = 217/465 (46%), Gaps = 42/465 (9%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLS 99
            + VLD I     +  R  Y  LL+ C     +   + +H   LN   + D+ ++  LL 
Sbjct: 58  GLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLF 117

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +YA+CG L+ AR +F++M  R++ +W++MI  Y+++ R  + + LF  M+ DG  P++F 
Sbjct: 118 MYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFT 177

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
              +++ CG    +  G+ +H+   K G      V +S++ +Y +CG L  A   F+ + 
Sbjct: 178 LSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLG 237

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC----- 274
            K+ V+WN++I+GY + GE +EA  LF +M RE  +    T++ L+ S + +G C     
Sbjct: 238 CKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMG-CLEQGK 296

Query: 275 ------------------DVAMEMVKRMESLG---------ITPDVFTWTCMISGFAQNG 307
                             +  + M  +  S+          +  DV +   M+ G+AQ+G
Sbjct: 297 WLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHG 356

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
              +A   F EM   G+ PN +T  S ++AC+  + L  G     L  K      V    
Sbjct: 357 LGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYA 416

Query: 368 SLINMYSKCEELEAAER-VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL--FIKMQESD 424
           +++++  +   L+ A+  + +M  +  V  W +++     A    K  E+  +   +  +
Sbjct: 417 TIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLG----ASKMHKNTEMGAYAAQRVFE 472

Query: 425 VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
           + P+    + L++    +    E V   +++ K+  VK+  A SW
Sbjct: 473 LDPSYPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSW 517



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 172/364 (47%), Gaps = 11/364 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           N R ++A+ +   + + GA+    T  +L++ C    S +  R++HA         +VFV
Sbjct: 153 NDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFV 212

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YA+CG L +A  VF+ +  +N  +W+A+I  Y+R     E + LF  M ++G 
Sbjct: 213 GSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGY 272

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P +F +  +L +C + G  E GK +H+ ++K     V  V N++L +Y K G +  A +
Sbjct: 273 RPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEK 332

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ + + D V+ NSM+ GY Q G   EA + FD+M R  I+   +TF  ++ + +    
Sbjct: 333 VFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARL 392

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
            D        M    I P V  +  ++    + G   QA    +EM    + P  V I  
Sbjct: 393 LDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMP---IEPT-VAIWG 448

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS---LINMYSKCEELEAAERVFDMIK 390
           A+   + +       E+ + A +  F  D     +   L N+Y+     E   +V  ++K
Sbjct: 449 ALLGASKMHK---NTEMGAYAAQRVFELDPSYPGTHTLLANIYASAGRWEDVAKVRKIMK 505

Query: 391 DKDV 394
           D  V
Sbjct: 506 DSGV 509


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 203/618 (32%), Positives = 318/618 (51%), Gaps = 46/618 (7%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++F W  MI G         A+ L+  M   G +PN  TI   + AC     + +G++I
Sbjct: 77  PNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKI 136

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           HSL VK G+  DV V  SL+++Y KC+  + A +VFD I DK+V SW ++I GY  +G+ 
Sbjct: 137 HSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHF 196

Query: 411 GKAYELFIKMQESDVPP-----------------------------------NVITWNVL 435
            +A   F K+ E  + P                                   NV     L
Sbjct: 197 REAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSL 256

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           +  Y++ GN + A  +F  M + D V     SW+++I GY   G    AL +F +MQS  
Sbjct: 257 LDMYVKCGNLERANLIFSAMPEKDIV-----SWSTMIQGYAFNGLPQQALDLFFQMQSEN 311

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
             P+C T++ VL ACA L A +        + R    S+  +  +LID Y+K G++  + 
Sbjct: 312 LKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAW 371

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            IF  M  KD + WN+++ G  ++G   A   LF  ++  G++P+  TF+ ++   +  G
Sbjct: 372 EIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGG 431

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
            V+ G++ F ++   + + P IEHY  M+DL GR+G L EA + I +MP++P++ +W AL
Sbjct: 432 FVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGAL 491

Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
           L  C++H +  LA   +++L +LEP +      +  IY+   + E+A K+R   +E   +
Sbjct: 492 LGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQ 551

Query: 736 NSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA-----RSSHSGLCIEEE 790
                 WIE+  +V+ F+ G  S   S+ +Y+ L  +   + A      +      IEEE
Sbjct: 552 KIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEE 611

Query: 791 EKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLAD 850
           EKE   G HSEKLA+AF LI +S   H IR+VKN+R+C  CH+  K +S +   EI + D
Sbjct: 612 EKEHFLGYHSEKLAVAFGLI-ASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRD 670

Query: 851 SKCLHHFKNGQCSCGDYW 868
           +   H F +G CSC DYW
Sbjct: 671 TNRFHTFIDGSCSCRDYW 688



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 131/517 (25%), Positives = 227/517 (43%), Gaps = 51/517 (9%)

Query: 77  RKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           + +HA  L L  + D ++   +L      G  + ++ VF  ++E N++ W+ MI      
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
             + + + L+  M   G  P++F  P +L+AC    D   G  +HSL++K G      V+
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
            S+L++YVKC     A + F+ + +K+ V+W ++I+GY   G   EA   F K+    +K
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF--------------------- 294
               +   ++ +  +LG C     + + +   G+  +VF                     
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272

Query: 295 ----------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
                     +W+ MI G+A NG   QALDLF +M    + P+  T+   +SAC  L AL
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
            +G+   SL  +  F  + ++G +LI+MYSKC  +  A  +F  +K KD   WN+M+ G 
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGL 392

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
              G+    + LF  +++  + P+  T+  L+ G    G  +E    F  M +   +  +
Sbjct: 393 SMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPS 452

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
              +  ++    + G  N A  +   M      PN V   ++L                G
Sbjct: 453 IEHYGCMVDLLGRAGLLNEAHQLINNMPMK---PNAVVWGALLG---------------G 494

Query: 525 CVLRRSLESSLPVMNSLIDTYA-KSGNIVYSRTIFDG 560
           C L +    +  V+  LI+     SGN V    I+ G
Sbjct: 495 CKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSG 531



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 203/444 (45%), Gaps = 25/444 (5%)

Query: 7   TTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQA 66
           T + +L     K+ N    +T +  L      ++AI +  S+   G      T   +L+A
Sbjct: 64  TNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKA 123

Query: 67  CIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTW 125
           C     + L  K+H+ L     + DVFVKT LLS+Y KC   DDA +VF+D+ ++N+ +W
Sbjct: 124 CARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSW 183

Query: 126 SAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK 185
           +A+I  Y     +RE +  F  +++ GL PD F   K+L AC   GD  +G+ +   +  
Sbjct: 184 TAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISD 243

Query: 186 LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRL 245
            GM     V  S+L +YVKCG L  A   F +M EKD V+W++MI GY   G   +A  L
Sbjct: 244 SGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDL 303

Query: 246 FDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ 305
           F +M  E +K    T   ++ +   LG  D+ +     M+      +    T +I  +++
Sbjct: 304 FFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSK 363

Query: 306 NGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
            G  +QA ++F  M     V+ N + +   +S     KA+     + SL  K G   D  
Sbjct: 364 CGSVTQAWEIFTAMKRKDRVVWNAMMV--GLSMNGHAKAV---FSLFSLVEKHGIRPD-- 416

Query: 365 VGNSLINMYSKCEE----------LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
             N+ I +   C                +RVF +    + Y    M+    +AG   +A+
Sbjct: 417 -ENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYG--CMVDLLGRAGLLNEAH 473

Query: 415 ELFIKMQESDVPPNVITWNVLISG 438
           +L   M    + PN + W  L+ G
Sbjct: 474 QLINNMP---MKPNAVVWGALLGG 494



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 103/215 (47%), Gaps = 6/215 (2%)

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
           N++K IH  +LR  L+    ++N ++      G+  YS+ +F  +   +I  WN++I G 
Sbjct: 30  NQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGL 89

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIP 635
           V    +  A+ L+  M+  G  PN  T   ++ A +    V LG K+   + +  Y    
Sbjct: 90  VSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDV 149

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
            ++  ++++ LY +    ++A++  +D+P + +   W A++T     G+   A+ A ++L
Sbjct: 150 FVK--TSLLSLYVKCDNFDDALKVFDDIP-DKNVVSWTAIITGYISSGHFREAIGAFKKL 206

Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLER 730
             LE G       ++++ A C +  D      ++R
Sbjct: 207 --LEMGLKPDSFSLVKVLAACARLGDCTSGEWIDR 239


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 215/684 (31%), Positives = 342/684 (50%), Gaps = 69/684 (10%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M+  G+FPD + FP +++ C    +   GK++  +++++G      V +S++ +Y   G 
Sbjct: 1   MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------ 261
           +  ARRFF+ M +KD V WN MI+GY Q GE+D A +LF  M   E K   VTF      
Sbjct: 61  IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120

Query: 262 -----------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
                                        N L+  Y++  Q   A ++   M  +    D
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQI----D 176

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           +  W  MI G+ QNG    A  LF EM   G+ P+ +T TS + +  +  +L    EIH 
Sbjct: 177 LVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHG 236

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
             V+ G   DV + ++LI++Y KC +   A ++F++    D+  + +MI+GY   G    
Sbjct: 237 YIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKD 296

Query: 413 AYELFIKMQESDVPPNVITWNVLIS---------------GYIQNGNEDEA-------VD 450
           A E+F  + +  + PN +T++ ++                GYI     +E        ++
Sbjct: 297 ALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMN 356

Query: 451 LFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           ++ + G+ D           ++   WNS+I  + Q G+   A+ +FR+M       +CVT
Sbjct: 357 MYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVT 416

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
           + + L ACA + A +  KEIHG +++ + ES L  M++LI+ YAK G +  +R +F+ M 
Sbjct: 417 VSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQ 476

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            K+ + WNS+I  Y  HG+   +L LF  M   G++P+  TFL+I+ +   AG V+ G +
Sbjct: 477 EKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVR 536

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F  +TE Y I   +EHY+ M DL+GR+G L+EA E I  MP  P +S+W  LL ACR+H
Sbjct: 537 YFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVH 596

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
           GN++LA +A   L DLEP +     L+  + A  GK     K++ L +E   +   G  W
Sbjct: 597 GNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSW 656

Query: 743 IEVKNLVYTFVTGGWSESYSDLLY 766
           IEV N    F     S   S  +Y
Sbjct: 657 IEVNNTTCVFFAADGSHPESPQIY 680



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 164/630 (26%), Positives = 288/630 (45%), Gaps = 72/630 (11%)

Query: 57  RNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           + T+  +++ C   N++ L + +    L +  ++D+FV + L+ +YA  GC++DAR  F+
Sbjct: 10  KYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFD 69

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            M +++   W+ MI  Y +       ++LF  M+     PD   F  +L    +    E 
Sbjct: 70  KMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEY 129

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G+ +H LV++ G+  V  V N+++ VY K  +L  AR+ F+ M + D V WN MI GY Q
Sbjct: 130 GRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQ 189

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSY---NQLGQC--------------DVAM 278
            G  D+A  LF++M    IK   +TF   + S    + L Q               DV +
Sbjct: 190 NGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYL 249

Query: 279 E--------------MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
                          M  +M +L    D+  +T MISG+  NG    AL++F+ +    +
Sbjct: 250 NSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKM 309

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
           +PN +T +S + AC  L A+ +G E+H   +K    +   VG++++NMY+KC  L+ A  
Sbjct: 310 IPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHL 369

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS------- 437
           +F  I  KD   WNS+I  + Q G   +A  LF +M    V  + +T +  +S       
Sbjct: 370 IFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPA 429

Query: 438 --------GYIQNG-------NEDEAVDLFQRMGK--------NDKVKRNTASWNSLIAG 474
                   G++  G       +    ++++ + GK        N   ++N  +WNS+IA 
Sbjct: 430 LHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAA 489

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLES 533
           Y   G   ++L +F  M      P+ +T L++L +C +     + V+          + +
Sbjct: 490 YGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPA 549

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT-WNSLICGYVLHGFWHAALDLFDQM 592
            +     + D + ++G++  +  +   M      + W +L+    +HG  +  L      
Sbjct: 550 QMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHG--NVELAEVASR 607

Query: 593 KSFGLKP-NRGTFLSIILAHSLAGMVDLGK 621
               L+P N G +L  +L H LA   D GK
Sbjct: 608 YLLDLEPKNSGYYL--LLTHVLA---DAGK 632



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           +G+  EAI +   +  +G K    T    L AC +  ++H  +++H F+     E D+F 
Sbjct: 392 DGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFD 451

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+++YAKCG L+ AR VF  M+E+N   W+++I AY       + + LF  M+++G+
Sbjct: 452 MSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGI 511

Query: 154 FPDDFLFPKILQACGNCGDFEAG 176
            PD   F  IL +CG+ G  E G
Sbjct: 512 QPDHITFLTILSSCGHAGQVEDG 534


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  352 bits (903), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 203/618 (32%), Positives = 318/618 (51%), Gaps = 46/618 (7%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++F W  MI G         A+ L+  M   G +PN  TI   + AC     + +G++I
Sbjct: 77  PNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKI 136

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           HSL VK G+  DV V  SL+++Y KC+  + A +VFD I DK+V SW ++I GY  +G+ 
Sbjct: 137 HSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHF 196

Query: 411 GKAYELFIKMQESDVPP-----------------------------------NVITWNVL 435
            +A   F K+ E  + P                                   NV     L
Sbjct: 197 REAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSL 256

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           +  Y++ GN + A  +F  M + D V     SW+++I GY   G    AL +F +MQS  
Sbjct: 257 LDMYVKCGNLERANLIFSAMPEKDIV-----SWSTMIQGYAFNGLPQQALDLFFQMQSEN 311

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
             P+C T++ VL ACA L A +        + R    S+  +  +LID Y+K G++  + 
Sbjct: 312 LKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAW 371

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            IF  M  KD + WN+++ G  ++G   A   LF  ++  G++P+  TF+ ++   +  G
Sbjct: 372 EIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGG 431

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
            V+ G++ F ++   + + P IEHY  M+DL GR+G L EA + I +MP++P++ +W AL
Sbjct: 432 FVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGAL 491

Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
           L  C++H +  LA   +++L +LEP +      +  IY+   + E+A K+R   +E   +
Sbjct: 492 LGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQ 551

Query: 736 NSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA-----RSSHSGLCIEEE 790
                 WIE+  +V+ F+ G  S   S+ +Y+ L  +   + A      +      IEEE
Sbjct: 552 KIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVLFDIEEE 611

Query: 791 EKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLAD 850
           EKE   G HSEKLA+AF LI +S   H IR+VKN+R+C  CH+  K +S +   EI + D
Sbjct: 612 EKEHFLGYHSEKLAVAFGLI-ASPPNHVIRVVKNLRVCGDCHDAIKLISKITKREIIIRD 670

Query: 851 SKCLHHFKNGQCSCGDYW 868
           +   H F +G CSC DYW
Sbjct: 671 TNRFHTFIDGSCSCRDYW 688



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 131/517 (25%), Positives = 227/517 (43%), Gaps = 51/517 (9%)

Query: 77  RKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           + +HA  L L  + D ++   +L      G  + ++ VF  ++E N++ W+ MI      
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
             + + + L+  M   G  P++F  P +L+AC    D   G  +HSL++K G      V+
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVK 152

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
            S+L++YVKC     A + F+ + +K+ V+W ++I+GY   G   EA   F K+    +K
Sbjct: 153 TSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMGLK 212

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF--------------------- 294
               +   ++ +  +LG C     + + +   G+  +VF                     
Sbjct: 213 PDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLI 272

Query: 295 ----------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
                     +W+ MI G+A NG   QALDLF +M    + P+  T+   +SAC  L AL
Sbjct: 273 FSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGAL 332

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
            +G+   SL  +  F  + ++G +LI+MYSKC  +  A  +F  +K KD   WN+M+ G 
Sbjct: 333 DLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGL 392

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
              G+    + LF  +++  + P+  T+  L+ G    G  +E    F  M +   +  +
Sbjct: 393 SMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPS 452

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
              +  ++    + G  N A  +   M      PN V   ++L                G
Sbjct: 453 IEHYGCMVDLLGRAGLLNEAHQLINNMPMK---PNAVVWGALLG---------------G 494

Query: 525 CVLRRSLESSLPVMNSLIDTYA-KSGNIVYSRTIFDG 560
           C L +    +  V+  LI+     SGN V    I+ G
Sbjct: 495 CKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSG 531



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 203/444 (45%), Gaps = 25/444 (5%)

Query: 7   TTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQA 66
           T + +L     K+ N    +T +  L      ++AI +  S+   G      T   +L+A
Sbjct: 64  TNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKA 123

Query: 67  CIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTW 125
           C     + L  K+H+ L     + DVFVKT LLS+Y KC   DDA +VF+D+ ++N+ +W
Sbjct: 124 CARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSW 183

Query: 126 SAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK 185
           +A+I  Y     +RE +  F  +++ GL PD F   K+L AC   GD  +G+ +   +  
Sbjct: 184 TAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISD 243

Query: 186 LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRL 245
            GM     V  S+L +YVKCG L  A   F +M EKD V+W++MI GY   G   +A  L
Sbjct: 244 SGMGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDL 303

Query: 246 FDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ 305
           F +M  E +K    T   ++ +   LG  D+ +     M+      +    T +I  +++
Sbjct: 304 FFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSK 363

Query: 306 NGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
            G  +QA ++F  M     V+ N + +   +S     KA+     + SL  K G   D  
Sbjct: 364 CGSVTQAWEIFTAMKKKDRVVWNAMMV--GLSMNGHAKAV---FSLFSLVEKHGIRPD-- 416

Query: 365 VGNSLINMYSKCEE----------LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
             N+ I +   C                +RVF +    + Y    M+    +AG   +A+
Sbjct: 417 -ENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYG--CMVDLLGRAGLLNEAH 473

Query: 415 ELFIKMQESDVPPNVITWNVLISG 438
           +L   M    + PN + W  L+ G
Sbjct: 474 QLINNMP---MKPNAVVWGALLGG 494



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 103/215 (47%), Gaps = 6/215 (2%)

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
           N++K IH  +LR  L+    ++N ++      G+  YS+ +F  +   +I  WN++I G 
Sbjct: 30  NQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGL 89

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIP 635
           V    +  A+ L+  M+  G  PN  T   ++ A +    V LG K+   + +  Y    
Sbjct: 90  VSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDV 149

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
            ++  ++++ LY +    ++A++  +D+P + +   W A++T     G+   A+ A ++L
Sbjct: 150 FVK--TSLLSLYVKCDNFDDALKVFDDIP-DKNVVSWTAIITGYISSGHFREAIGAFKKL 206

Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLER 730
             LE G       ++++ A C +  D      ++R
Sbjct: 207 --LEMGLKPDSFSLVKVLAACARLGDCTSGEWIDR 239


>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
 gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
          Length = 627

 Score =  352 bits (902), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 200/585 (34%), Positives = 320/585 (54%), Gaps = 49/585 (8%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC-TDLKALAMGM 348
           TP    W  +ISG  + GR  ++   F +M+  G  P  VT  S +SAC    + + +GM
Sbjct: 86  TP--VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGM 143

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           ++H   V  G   D+ V N+L++MY++C ++                             
Sbjct: 144 QVHGRVVGSGVLPDLRVENALVDMYAECADM----------------------------- 174

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
             G A+++F  MQ      +V++W  L+SG  + G  DEA DLF RM +     R+T SW
Sbjct: 175 --GSAWKVFDGMQVR----SVVSWTSLLSGLARLGQVDEARDLFDRMPE-----RDTVSW 223

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
            ++I GY    +   AL +FR+MQ S    +  T++SV+ ACA L A    + +   + R
Sbjct: 224 TAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSR 283

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
           + ++    V N+LID Y+K G+I  +  +F GM  +D  TW ++I G  ++G+   A+++
Sbjct: 284 QGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEM 343

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F +M      P+  TF+ ++ A + AG+VD G++ F S+ E Y I P + HY  +IDL G
Sbjct: 344 FHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLG 403

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+GK+ EA++ I+ MP+ P+S+IW  LL ACR+HGN ++  L  ERL +L+P + ++  L
Sbjct: 404 RAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYIL 463

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  IYA C + ED  ++R    E   +   G   IE+  +++ FV G  S   S  +YS 
Sbjct: 464 LSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSK 523

Query: 769 LQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
           L+++  ++        +      + E+EK+++   HSEKLA+AFAL+ SS+    IRIVK
Sbjct: 524 LESIISDLNNVGYFPDVTEVFVEVAEKEKKKVLYWHSEKLAIAFALL-SSKPNTVIRIVK 582

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+RMC+ CH   K +S ++  E+ + D    HHF++G CSC DYW
Sbjct: 583 NLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 627



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 173/388 (44%), Gaps = 43/388 (11%)

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACG-NCGDFEAGKLMHSL 182
            W+A+I  ++R  R+ E    F  M + G  P    +  +L ACG    D   G  +H  
Sbjct: 89  AWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGR 148

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           V+  G+    RV N+++ +Y +C  +  A + F+ M  +  V+W S++SG          
Sbjct: 149 VVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGL--------- 199

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
                                      +LGQ D A ++  RM       D  +WT MI G
Sbjct: 200 --------------------------ARLGQVDEARDLFDRMPE----RDTVSWTAMIDG 229

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           +    R  +AL++F+EM +  V  +  T+ S I+AC  L AL MG  +     + G   D
Sbjct: 230 YVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMD 289

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
             VGN+LI+MYSKC  +E A  VF  +  +D ++W ++I G    GY  +A E+F +M  
Sbjct: 290 AFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIR 349

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
               P+ +T+  +++     G  D+  + F  M +   +  N   +  +I    + G+  
Sbjct: 350 VSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKIT 409

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPAC 510
            AL    +M  +   PN     ++L AC
Sbjct: 410 EALDTIDQMPMT---PNSTIWGTLLAAC 434



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 176/394 (44%), Gaps = 38/394 (9%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQAC-IDSNSIHLARKLHAFL-------NLV 86
            GR  E+      +A  GA     TY+++L AC   +  + L  ++H  +       +L 
Sbjct: 100 GGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLR 159

Query: 87  TE---IDVFVK----------------------TKLLSVYAKCGCLDDAREVFEDMRERN 121
            E   +D++ +                      T LLS  A+ G +D+AR++F+ M ER+
Sbjct: 160 VENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERD 219

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
             +W+AMI  Y    R+RE +E+F  M    +  D+F    ++ AC   G  E G+ +  
Sbjct: 220 TVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRV 279

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
            + + G+     V N+++ +Y KCG +  A   F+ M  +D   W ++I G    G  +E
Sbjct: 280 YMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEE 339

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMI 300
           A  +F +M R       VTF  ++ +    G  D   E    M E+  I P+V  + C+I
Sbjct: 340 AIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCII 399

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
               + G+ ++ALD   +M      PN     + ++AC       +G  +    +++   
Sbjct: 400 DLLGRAGKITEALDTIDQMPMT---PNSTIWGTLLAACRVHGNSEIGELVAERLLELD-P 455

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           ++ +V   L N+Y+KC   E   R+   I +K +
Sbjct: 456 ENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGI 489



 Score = 46.6 bits (109), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 114/264 (43%), Gaps = 17/264 (6%)

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASN----KVKEIHGCVLRRSLESSLPVM 538
           +A+  + +M +    P+  T  ++L A A     +      + +H  V+R  +  +  V 
Sbjct: 2   DAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVA 61

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           +SL+  Y   G+   +R +     +   + WN+LI G+   G +  +   F  M   G  
Sbjct: 62  SSLVAAYTAGGDGAAARALVGECDTP--VAWNALISGHNRGGRFGESCGSFVDMARAGAA 119

Query: 599 PNRGTFLSIILAHSLAGMVD--LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           P   T++S++ A    G  D  LG +V   +     ++P +   +A++D+Y     +  A
Sbjct: 120 PTPVTYVSVLSACG-KGTRDVLLGMQVHGRVVGS-GVLPDLRVENALVDMYAECADMGSA 177

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP-GDVLIQRLILQIYAI 715
            +  + M +    S W +LL+     G +D A      LFD  P  D +    ++  Y  
Sbjct: 178 WKVFDGMQVRSVVS-WTSLLSGLARLGQVDEA----RDLFDRMPERDTVSWTAMIDGYVW 232

Query: 716 CGKPEDALKV-RKLERENTRRNSF 738
             +  +AL++ R+++  N   + F
Sbjct: 233 AARFREALEMFREMQYSNVSADEF 256


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  352 bits (902), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 211/626 (33%), Positives = 329/626 (52%), Gaps = 55/626 (8%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           DVF+W  +I+  A++G +++AL  F  M  + + P   +   AI AC+ L  +  G + H
Sbjct: 40  DVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTH 99

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
             A   G+  D+ V ++LI MYS C +LE A +VFD I  +++ SW SMI GY   G   
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159

Query: 412 KAYELF--IKMQESD---------------------------------------VPPNVI 430
            A  LF  + ++E+D                                           V 
Sbjct: 160 DAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVS 219

Query: 431 TWNVLISGYIQNGNEDEAV--DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
             N L+  Y + G    AV   +F ++   D+V     S+NS+++ Y Q G  N A  VF
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRV-----SYNSIMSVYAQSGMSNEAFDVF 274

Query: 489 RKM-QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           R++ +      NC+T+ +VL A ++  A    K IH  V+R  LE  + V  S+ID Y K
Sbjct: 275 RRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G +  +R  FD M +K++ +W ++I GY +HG    AL+LF  M   G++PN  TF+S+
Sbjct: 335 CGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           + A S AG+ D+G   F ++   + + P +EHY  M+DL GR+G L++A + I+ M +EP
Sbjct: 395 LAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEP 454

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           DS IW +LL ACRIH N++LA +++ RLF+L+P +     L+  IYA  G+ +D  +VR 
Sbjct: 455 DSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRWKDVERVRM 514

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTAR---SSHSG 784
             +        G   +E+   V+ F+ G       + +Y +L  +   +      S+ S 
Sbjct: 515 TMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSS 574

Query: 785 LC--IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMH 842
           +C  ++EEEKE    +HSEKLA+AF ++ +     T+ +VKN+R+C  CH   K +S + 
Sbjct: 575 VCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGS-TVNVVKNLRVCSDCHNVIKLISKIV 633

Query: 843 HCEIFLADSKCLHHFKNGQCSCGDYW 868
             E  + D+K  HHFK+G CSCGDYW
Sbjct: 634 DREFVVRDAKRFHHFKDGFCSCGDYW 659



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 208/471 (44%), Gaps = 78/471 (16%)

Query: 82  FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           F   V + DVF    +++  A+ G   +A   F  MR+ +LY                  
Sbjct: 32  FNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLY------------------ 73

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
                        P    FP  ++AC +  D  +GK  H      G      V ++++ +
Sbjct: 74  -------------PTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVSSALIVM 120

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGY---------------FQIGENDEAHRLF 246
           Y  CGKL  AR+ F+ + +++ V+W SMI GY                 I END+   +F
Sbjct: 121 YSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEENDDDATMF 180

Query: 247 -DKM-------------------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEM 280
            D M                          +     GV   N L+ +Y + G+  VA  +
Sbjct: 181 LDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVA--V 238

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP-NGVTITSAISACT 339
            +++    +  D  ++  ++S +AQ+G +++A D+F+ +    V+  N +T+++ + A +
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLSTVLLAVS 298

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
              AL +G  IH   ++MG  DDV+VG S+I+MY KC  +E A   FD +K+K+V SW +
Sbjct: 299 HSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAFDRMKNKNVRSWTA 358

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           MIAGY   G+  KA ELF  M +S V PN IT+  +++     G  D     F  M    
Sbjct: 359 MIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHDVGWHWFNAMKGRF 418

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            V+     +  ++    + G    A  + +KM+     P+ +   S+L AC
Sbjct: 419 GVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMK---MEPDSIIWSSLLAAC 466



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 211/453 (46%), Gaps = 84/453 (18%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH--AFLNLVTEI 89
           L  +G   EA+    S+        R+++   ++AC     I   ++ H  AF+    + 
Sbjct: 51  LARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFV-FGYQS 109

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF-LM 148
           D+FV + L+ +Y+ CG L+DAR+VF+++ +RN+ +W++MI  Y  +    + V LF  L+
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169

Query: 149 VQDG-----LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           +++      +F D      ++ AC         + +HS VIK G      V N++L  Y 
Sbjct: 170 IEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229

Query: 204 KCGK--LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           K G+  +  AR+ F+ + +KD V++NS++S Y Q G ++EA  +F ++ +E+    VVTF
Sbjct: 230 KGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEK----VVTF 285

Query: 262 N-------ILIRSYN---QLGQC--DVAMEM------------------VKRMESLGITP 291
           N       +L  S++   ++G+C  D  + M                    R+E+  +  
Sbjct: 286 NCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARLAF 345

Query: 292 D------VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
           D      V +WT MI+G+  +G  ++AL+LF  M   GV PN +T  S ++AC+      
Sbjct: 346 DRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACS------ 399

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
                       G  D   VG    N       +E             +  +  M+    
Sbjct: 400 ----------HAGLHD---VGWHWFNAMKGRFGVEPG-----------LEHYGCMVDLLG 435

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           +AG+  KAY+L  KM+   + P+ I W+ L++ 
Sbjct: 436 RAGFLQKAYDLIQKMK---MEPDSIIWSSLLAA 465


>gi|224060371|ref|XP_002300166.1| predicted protein [Populus trichocarpa]
 gi|222847424|gb|EEE84971.1| predicted protein [Populus trichocarpa]
          Length = 719

 Score =  352 bits (902), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 210/588 (35%), Positives = 312/588 (53%), Gaps = 22/588 (3%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           ++FT+  +I G   N     A+  F+ M   G+ P+ +T    + +   L +  +GM IH
Sbjct: 143 NLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIH 202

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK-----DVYSWNSMIAGYCQ 406
            + ++ G   D  V  SL++MY K E+L +A +VFD   ++         WN +I G C+
Sbjct: 203 CMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCK 262

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
           AG   KA +LF  M + +     ++W+ LI G+ +NG+ D A++LF +M +     +N  
Sbjct: 263 AGSMKKAVKLFKAMPKKEN----VSWSTLIDGFAKNGDMDRAMELFDQMPE-----KNVV 313

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           SW +++ G+ + G    AL +F KM      PN  TI+S L ACA +        IH  +
Sbjct: 314 SWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYI 373

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
               L  +  +  +L+D YAK GNI  +  +F     K I TW  +I G+ +HG    A+
Sbjct: 374 KDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAI 433

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
             F QM   G+KP+   FL+++ A   +G VD+G   F S+   Y I P ++HY+ ++D+
Sbjct: 434 ACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDM 493

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GRSG+L+EA+ FIE MP+ PD  IW AL  ACR H    +A  A+ +L  LEP      
Sbjct: 494 LGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNY 553

Query: 707 RLILQIYAICGKPEDALKVRKL-ERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
             +   YA  G+ EDA +VR L +     +NS   C IEV+  V+ FV+G      S  +
Sbjct: 554 IFLSNAYAALGQWEDAERVRVLMQNRGVHKNSGWSC-IEVEGQVHRFVSGDHDHKDSKAI 612

Query: 766 YSWLQNVPENVTARSSHSGL-----CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIR 820
              L+ +      +    G       +E+EEKE++ G H EKLALAFALI +S    TIR
Sbjct: 613 CLKLEEIMAGAVKQGYIPGTEWVLHNMEQEEKEDVLGSHGEKLALAFALICTSPG-MTIR 671

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IVKN+++C  CH   KY S +   EI L D K  HHFK+G CSC D+W
Sbjct: 672 IVKNLQVCGDCHSLMKYASKISQREIMLRDMKRFHHFKDGSCSCRDHW 719



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 206/405 (50%), Gaps = 13/405 (3%)

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            + T+L+S  +    ++ +  VF   + +NL+T++A+I   + +  +   +  F LM++ 
Sbjct: 114 LITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRS 173

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+ PD   +P +L++       E G  +H ++++ G+     VR S++ +YVK  KL  A
Sbjct: 174 GIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSA 233

Query: 212 RRFFESMDEK-----DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            + F+   E+       + WN +I G  + G   +A +LF  M ++E     V+++ LI 
Sbjct: 234 FKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAVKLFKAMPKKE----NVSWSTLID 289

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            + + G  D AME+  +M       +V +WT M+ GF++NG + +AL +F +M   GV P
Sbjct: 290 GFAKNGDMDRAMELFDQMPE----KNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRP 345

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           N  TI SA+SAC  +  L  G+ IH      G      +G +L++MY+KC  +E+A  VF
Sbjct: 346 NAFTIVSALSACAKIGGLEAGLRIHKYIKDNGLHLTEALGTALVDMYAKCGNIESASEVF 405

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
              + K + +W  MI G+   G+  +A   F +M  + + P+ + +  L++  + +G  D
Sbjct: 406 GETEQKSIRTWTVMIWGWAIHGHSEQAIACFKQMMFAGIKPDEVVFLALLTACMHSGQVD 465

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
             ++ F  M  +  ++ +   +  ++    + GQ   AL    +M
Sbjct: 466 IGLNFFDSMRLDYCIEPSMKHYTLIVDMLGRSGQLKEALRFIERM 510



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 158/336 (47%), Gaps = 12/336 (3%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           L++ C  + S+  A KL  F  +  + +V   T L+  +AK G +D A E+F+ M E+N+
Sbjct: 256 LIKGCCKAGSMKKAVKL--FKAMPKKENVSWST-LIDGFAKNGDMDRAMELFDQMPEKNV 312

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            +W+ M+  +SR+    + + +F  M+++G+ P+ F     L AC   G  EAG  +H  
Sbjct: 313 VSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKY 372

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           +   G+     +  +++ +Y KCG +  A   F   ++K    W  MI G+   G +++A
Sbjct: 373 IKDNGLHLTEALGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQA 432

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMIS 301
              F +M    IK   V F  L+ +    GQ D+ +     M     I P +  +T ++ 
Sbjct: 433 IACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVD 492

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
              ++G+  +AL   + M    + P+ V   +   AC   K   M     +  +K+  T 
Sbjct: 493 MLGRSGQLKEALRFIERMP---MNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTH 549

Query: 362 DVLVGNS--LINMYSKCEELEAAERVFDMIKDKDVY 395
               GN   L N Y+   + E AERV  +++++ V+
Sbjct: 550 ---TGNYIFLSNAYAALGQWEDAERVRVLMQNRGVH 582



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 127/280 (45%), Gaps = 13/280 (4%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-- 84
           T +D    NG   +A+++   +  +G +    T ++ L AC     +    ++H ++   
Sbjct: 317 TMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLEAGLRIHKYIKDN 376

Query: 85  --LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
              +TE    + T L+ +YAKCG ++ A EVF +  ++++ TW+ MI  ++      + +
Sbjct: 377 GLHLTEA---LGTALVDMYAKCGNIESASEVFGETEQKSIRTWTVMIWGWAIHGHSEQAI 433

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAV 201
             F  M+  G+ PD+ +F  +L AC + G  + G     S+ +   +    +    ++ +
Sbjct: 434 ACFKQMMFAGIKPDEVVFLALLTACMHSGQVDIGLNFFDSMRLDYCIEPSMKHYTLIVDM 493

Query: 202 YVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCR-EEIKLGVV 259
             + G+L  A RF E M    D V W ++        +   A    +K+ + E    G  
Sbjct: 494 LGRSGQLKEALRFIERMPMNPDFVIWGALFCACRAHKKTKMAKFALNKLLKLEPTHTGNY 553

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
            F  L  +Y  LGQ + A  +   M++ G+  +   W+C+
Sbjct: 554 IF--LSNAYAALGQWEDAERVRVLMQNRGVHKNS-GWSCI 590



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 122/279 (43%), Gaps = 22/279 (7%)

Query: 458 NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASN 517
           N    +N  ++N+LI G        NA+  FR M  S   P+ +T   VL + A L ++ 
Sbjct: 137 NHHKPKNLFTFNALIRGLTTNSHFFNAIFHFRLMLRSGIKPDRLTYPFVLKSMAGLFSTE 196

Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM-----SSKDIITWNSL 572
               IH  +LR  +E    V  SL+D Y K   +  +  +FD       S    + WN L
Sbjct: 197 LGMAIHCMILRCGIELDSFVRVSLVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVL 256

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQ 632
           I G    G    A+ LF  M     K    ++ ++I   +  G +D   ++F  + E   
Sbjct: 257 IKGCCKAGSMKKAVKLFKAMP----KKENVSWSTLIDGFAKNGDMDRAMELFDQMPE--- 309

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLTACRIHGNIDLAV 689
               +  ++ M+D + R+G  E+A+     M    + P++    + L+AC   G ++ A 
Sbjct: 310 --KNVVSWTTMVDGFSRNGDSEKALSMFSKMLEEGVRPNAFTIVSALSACAKIGGLE-AG 366

Query: 690 LAIERLFDLEPGDVLIQRL---ILQIYAICGKPEDALKV 725
           L I +    + G  L + L   ++ +YA CG  E A +V
Sbjct: 367 LRIHKYIK-DNGLHLTEALGTALVDMYAKCGNIESASEV 404



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 92/189 (48%), Gaps = 13/189 (6%)

Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
           ++ +IH  ++  +L SS  +   LI + +   +I +S  +F+    K++ T+N+LI G  
Sbjct: 96  QLHQIHAQIIIHNLSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLT 155

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM--VDLGKKVFCSITECYQIIP 635
            +  +  A+  F  M   G+KP+R T+  ++   S+AG+   +LG  + C I  C   + 
Sbjct: 156 TNSHFFNAIFHFRLMLRSGIKPDRLTYPFVL--KSMAGLFSTELGMAIHCMILRCGIELD 213

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSS----IWEALLTACRIHGNIDLAVLA 691
                S ++D+Y +  KL  A +  ++ P   DS     +W  L+  C   G++  AV  
Sbjct: 214 SFVRVS-LVDMYVKVEKLGSAFKVFDESPERFDSGSSALLWNVLIKGCCKAGSMKKAV-- 270

Query: 692 IERLFDLEP 700
             +LF   P
Sbjct: 271 --KLFKAMP 277


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  352 bits (902), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 230/765 (30%), Positives = 383/765 (50%), Gaps = 71/765 (9%)

Query: 171 GDFEAGKLMHSLVIK---LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE-KDGVAW 226
           GD   G+ +H  +++   L    V  V NS+L +Y +CG +  AR  F+ M   +D V+W
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAV--VANSLLTLYSRCGAVASARNVFDGMRGLRDIVSW 119

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-----------------YN 269
            +M S   + G   E+  L  +M    +     T   +  +                  +
Sbjct: 120 TAMASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVH 179

Query: 270 QLG--QCDVA-----MEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQAL 313
           ++G    D+A     ++M+ R   L     VF          WT +IS + Q     +A+
Sbjct: 180 KMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAV 239

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
           ++F +    G  P+  T++S ISACT+L ++ +G+++HSLA++MGF  D  V   L++MY
Sbjct: 240 EIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMY 299

Query: 374 SKC---EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC-GKAYELFIKMQESDVPPNV 429
           +K    + ++ A +VF+ ++  DV SW ++I+GY Q+G    K   LF +M    + PN 
Sbjct: 300 AKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNH 359

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
           IT++ ++       + D    +   + K+++   +T   N+L++ Y + G    A  VF 
Sbjct: 360 ITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVG-NALVSMYAESGCMEEARRVFN 418

Query: 490 KMQS----SCFYP-----------------NCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           ++      SC                    +  T  S++ A A +    K +++H   L+
Sbjct: 419 QLYERSMISCITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLK 478

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
               S   V NSL+  Y++ G +  +   F+ +  +++I+W S+I G   HG+   AL L
Sbjct: 479 AGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSL 538

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F  M   G+KPN  T+++++ A S  G+V  GK+ F S+   + +IP +EHY+ M+DL  
Sbjct: 539 FHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLA 598

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           RSG ++EA+EFI +MP++ D+ +W+ LL ACR H NI++  +A + + +LEP D     L
Sbjct: 599 RSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVL 658

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  +YA  G  ++  ++R   R+N      G  W+EV+N  + F  G  S   +  +Y  
Sbjct: 659 LSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYGK 718

Query: 769 LQNVPENVTARSSHSGLCI-----EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
           L  +   +          I      +E KE+    HSEK+A+AF LI +S AP  IRI K
Sbjct: 719 LDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTS-APKPIRIFK 777

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+R+C  CH   KY+S     EI L DS   H  K+G+CSCG+YW
Sbjct: 778 NLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 201/398 (50%), Gaps = 33/398 (8%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D+ V + L+ + A+ G L  AR+VF+ + E+ +  W+ +I  Y + +   E VE+F   +
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG--- 206
           +DG  PD +    ++ AC   G    G  +HSL +++G +    V   ++ +Y K     
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSNIEQ 306

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIG-ENDEAHRLFDKMCREEIKLGVVTFNILI 265
            + +A + FE M + D ++W ++ISGY Q G + ++   LF +M  E IK   +T++ ++
Sbjct: 307 AMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSIL 366

Query: 266 RSYNQLGQCD----VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM-- 319
           ++   +   D    V   ++K  ++   T        ++S +A++G   +A  +F ++  
Sbjct: 367 KACANISDHDSGRQVHAHVIKSNQAAAHT----VGNALVSMYAESGCMEEARRVFNQLYE 422

Query: 320 ----------------SFVGVMPNGV---TITSAISACTDLKALAMGMEIHSLAVKMGFT 360
                             +G M  G+   T  S ISA   +  L  G ++H++ +K GF 
Sbjct: 423 RSMISCITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFG 482

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D  V NSL++MYS+C  LE A R F+ +KD++V SW SMI+G  + GY  +A  LF  M
Sbjct: 483 SDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDM 542

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
             + V PN +T+  ++S     G   E  + F+ M ++
Sbjct: 543 ILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRD 580



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 140/570 (24%), Positives = 252/570 (44%), Gaps = 76/570 (13%)

Query: 73  IHLARKLHAFL--NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMI 129
           + L R LH  L    + + D  V   LL++Y++CG +  AR VF+ MR  R++ +W+AM 
Sbjct: 64  LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123

Query: 130 GAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGM 188
              +R+   RE + L   M++ GL P+ +    +  AC     +   G ++  LV K+G+
Sbjct: 124 SCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGL 183

Query: 189 -SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
                 V ++++ +  + G L  AR+ F+ + EK  V W  +IS Y Q    +EA  +F 
Sbjct: 184 WGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFL 243

Query: 248 KMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP---------------- 291
               +  +    T + +I +  +LG   + +++      +G                   
Sbjct: 244 DFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKSN 303

Query: 292 ------------------DVFTWTCMISGFAQNG-RTSQALDLFKEMSFVGVMPNGVTIT 332
                             DV +WT +ISG+ Q+G + ++ + LF EM    + PN +T +
Sbjct: 304 IEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYS 363

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           S + AC ++     G ++H+  +K        VGN+L++MY++   +E A RVF+ + ++
Sbjct: 364 SILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYER 423

Query: 393 DVYS-------------------------WNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
            + S                         + S+I+     G   K  +L     ++    
Sbjct: 424 SMISCITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGS 483

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           +    N L+S Y + G  ++A   F     N+   RN  SW S+I+G  + G    AL +
Sbjct: 484 DRFVSNSLVSMYSRCGYLEDACRSF-----NELKDRNVISWTSMISGLAKHGYAERALSL 538

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS---LIDT 544
           F  M  +   PN VT ++VL AC+++    + KE    + R      +P M     ++D 
Sbjct: 539 FHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRD--HGLIPRMEHYACMVDL 596

Query: 545 YAKSGNIVYSRTIFDGMSSK-DIITWNSLI 573
            A+SG +  +    + M  K D + W +L+
Sbjct: 597 LARSGLVKEALEFINEMPLKADALVWKTLL 626


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  352 bits (902), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 227/782 (29%), Positives = 369/782 (47%), Gaps = 124/782 (15%)

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           +L+ C    +F   K +HS +IK        + N++++ Y K G + +A + F+ M   +
Sbjct: 15  LLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPN 74

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVK 282
             +WN+++S Y ++G   E   LFD M R                               
Sbjct: 75  LYSWNTILSAYSKLGRVSEMEYLFDAMPRR------------------------------ 104

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM-----SFVGVMPNGVTITSAISA 337
                    D  +W  +ISG+A  G   Q++  +  M     SF     N +T ++ +  
Sbjct: 105 ---------DGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSF---NLNRITFSTLLIL 152

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK---------------------- 375
            +    + +G +IH   VK GF   V VG+ L++MYSK                      
Sbjct: 153 ASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMY 212

Query: 376 ---------CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ----- 421
                    C  +E ++R+F  ++++D  SW SMI G+ Q G    A ++F +M+     
Sbjct: 213 NTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQ 272

Query: 422 ------------------------------ESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
                                          +D   N+   + L+  Y +  N   A  +
Sbjct: 273 MDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAV 332

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           F++M       +N  SW +++ GY Q G    A+  F  MQ     P+  T+ SV+ +CA
Sbjct: 333 FKKM-----TCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCA 387

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
            L +  +  + H   L   L S + V N+L+  Y K G+I  S  +F+ +S KD +TW +
Sbjct: 388 NLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTA 447

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
           L+ GY   G  +  + LF+ M + GLKP++ TF+ ++ A S AG+V+ G ++F S+   +
Sbjct: 448 LVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEH 507

Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
            I+P+ +HY+ MIDL+ R+G++EEA  FI  MP  PD+  W  LL++CR +GN+D+   A
Sbjct: 508 GIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWA 567

Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
            E L +L+P +     L+  +YA  GK E+  ++RK  R+   R   G  WI+ KN V+ 
Sbjct: 568 AEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHV 627

Query: 752 FVTGGWSESYSDLLYSWLQN-----VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALA 806
           F     S  +SD +YS L+      + E      +     + + EK ++   HSEKLA+A
Sbjct: 628 FSADDKSNPFSDQIYSELEKLNYKMIKEGYVPDMNSVLHDVGDSEKIKMLNHHSEKLAIA 687

Query: 807 FALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGD 866
           F L+        IR+VKN+R+C  CH   KY+S + + EI + D+   H FK+G CSCGD
Sbjct: 688 FGLLFIPPGL-PIRVVKNLRVCSDCHNATKYISKITNREILVRDTARFHLFKDGTCSCGD 746

Query: 867 YW 868
           +W
Sbjct: 747 FW 748



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 151/596 (25%), Positives = 269/596 (45%), Gaps = 119/596 (19%)

Query: 58  NTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           N Y  LL+ C ++++   A+ LH+  +  +   + F+   L+S YAK G +  A +VF+ 
Sbjct: 10  NHYCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQ 69

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELF------------------------------- 145
           M   NLY+W+ ++ AYS+  R  E+  LF                               
Sbjct: 70  MPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAY 129

Query: 146 -FLMVQDGLFP-DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
             ++  DG F  +   F  +L      G  + G+ +H  V+K G      V + ++ +Y 
Sbjct: 130 NLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYS 189

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           K G +  AR+ F+ + EK+ V +N++I G  + G  +++ RLF                 
Sbjct: 190 KMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLF----------------- 232

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
                          EM +R        D  +WT MI+GF QNG    A+D+F+EM    
Sbjct: 233 --------------FEMRER--------DSISWTSMITGFTQNGLDRDAIDIFREMKLEN 270

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           +  +  T  S ++AC  + AL  G ++H+  ++  + D++ V ++L++MY KC+ +++AE
Sbjct: 271 LQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAE 330

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW----------- 432
            VF  +  K+V SW +M+ GY Q GY  +A + F  MQ+  + P+  T            
Sbjct: 331 AVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLA 390

Query: 433 ------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                                   N L++ Y + G+ +++  LF  +   D+V     +W
Sbjct: 391 SLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEV-----TW 445

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
            +L++GY Q G+ N  +G+F  M +    P+ VT + VL AC+      K  +I   ++ 
Sbjct: 446 TALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMIN 505

Query: 529 RSLESSLPVMNS---LIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
                 +P+ +    +ID ++++G I  +R   + M  S D I+W +L+     +G
Sbjct: 506 E--HGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYG 559



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 158/306 (51%), Gaps = 5/306 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFV 93
           NG   +AI +   +  +  ++ + T+ ++L AC    ++   +++HA++      D +FV
Sbjct: 253 NGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFV 312

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +Y KC  +  A  VF+ M  +N+ +W+AM+  Y ++    E V+ F  M + G+
Sbjct: 313 ASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGI 372

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PDDF    ++ +C N    E G   H+  +  G+     V N+++ +Y KCG +  + R
Sbjct: 373 EPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHR 432

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F  +  KD V W +++SGY Q G+ +E   LF+ M    +K   VTF  ++ + ++ G 
Sbjct: 433 LFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGL 492

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            +   ++ + M    GI P    +TCMI  F++ GR  +A +   +M F    P+ ++  
Sbjct: 493 VEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFS---PDAISWA 549

Query: 333 SAISAC 338
           + +S+C
Sbjct: 550 TLLSSC 555



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 104/432 (24%), Positives = 193/432 (44%), Gaps = 43/432 (9%)

Query: 73  IHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY 132
           I  ARK+    + + E +V +   L+    +CG ++D++ +F +MRER+  +W++MI  +
Sbjct: 194 ISCARKV---FDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGF 250

Query: 133 SRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR 192
           +++   R+ +++F  M  + L  D + F  +L ACG     + GK +H+ +I+       
Sbjct: 251 TQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNI 310

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
            V ++++ +Y KC  +  A   F+ M  K+ V+W +M+ GY Q G ++EA + F  M + 
Sbjct: 311 FVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKY 370

Query: 253 EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP--------------------- 291
            I+    T   +I S   L   +   +   R  + G+                       
Sbjct: 371 GIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDS 430

Query: 292 ----------DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
                     D  TWT ++SG+AQ G+ ++ + LF+ M   G+ P+ VT    +SAC+  
Sbjct: 431 HRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRA 490

Query: 342 KALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNS 399
             +  G +I  S+  + G          +I+++S+   +E A    + M    D  SW +
Sbjct: 491 GLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWAT 550

Query: 400 MIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMG 456
           +++    Y        A E  +++     P N  ++ +L S Y   G  +E   L + M 
Sbjct: 551 LLSSCRFYGNMDIGKWAAEFLMELD----PHNTASYVLLSSVYAAKGKWEEVARLRKDMR 606

Query: 457 KNDKVKRNTASW 468
                K    SW
Sbjct: 607 DKGLRKEPGCSW 618


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 225/746 (30%), Positives = 364/746 (48%), Gaps = 80/746 (10%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N +++ YVK   L  AR  FESM  ++ V+W  MI GY Q  +  EA  L+ +MCR  +K
Sbjct: 81  NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK 140

Query: 256 -----------------------------------LGVVTFNILIRSYNQLGQCDVAMEM 280
                                                ++ FN L+ SY +    D+A ++
Sbjct: 141 PDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQL 200

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
              M     T D  ++  MI+G+ + G   +AL LF +M  +   P+G T  + +     
Sbjct: 201 FSEMP----TKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVG 256

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
            + +  G +IH LA+K  +  D+ V N+L++ YSK + ++ A+ +FD + + D  S+N +
Sbjct: 257 SEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNII 316

Query: 401 IAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS----------------------- 437
           I GY   G   K+++LF ++Q +        +  ++S                       
Sbjct: 317 ITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTA 376

Query: 438 -GYIQNGNEDEAVDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVF 488
              +Q GN    VD++ +  K +   R        N+  W ++I+ Y Q G    AL +F
Sbjct: 377 VSEVQVGNA--LVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMF 434

Query: 489 RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
           ++M     + +  T  S L A A L + +  K++H  V+R  L SS+   + L+D YA  
Sbjct: 435 KEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANC 494

Query: 549 GNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
           G++  +  +F  M  ++I+ WN+LI  Y  +G   A    F  M   GL P+  +FLS++
Sbjct: 495 GSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVL 554

Query: 609 LAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
            A S  G+V+     F S+T+ Y++ P  +HY+ MID+  RSG+  EA   I +MP EPD
Sbjct: 555 TACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPD 614

Query: 669 SSIWEALLTACRIHGNIDLAVLAIERLFDLEP-GDVLIQRLILQIYAICGKPEDALKVRK 727
             +W ++L +CRIH N DLA  A ++LF ++   D      +  IYA  GK E+A KV+K
Sbjct: 615 EVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKK 674

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSH 782
             RE   +      W+E+ + V+ F     +   ++ +   + ++      E     +S 
Sbjct: 675 AMRERGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSC 734

Query: 783 SGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMH 842
           +   ++EE K E    HSE+LA+AFALI + +    I I+KN+R CV CH   K +S + 
Sbjct: 735 TLQNVDEEMKIESLKYHSERLAIAFALINTPEGSPII-IMKNLRACVDCHAAIKVISKIV 793

Query: 843 HCEIFLADSKCLHHFKNGQCSCGDYW 868
             EI + DS   HHF++G CSCGDYW
Sbjct: 794 GREITVRDSSRFHHFRDGSCSCGDYW 819



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 168/677 (24%), Positives = 285/677 (42%), Gaps = 96/677 (14%)

Query: 31  FLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID 90
           F CG       I V   I   G     + +   L+  + +N I  AR+L   +       
Sbjct: 20  FYCGFSERIVDIPVDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSS 79

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           V     ++S Y K   L  ARE+FE M  RN  +W+ MIG YS++ + +E   L+  M +
Sbjct: 80  V---NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCR 136

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G+ PD   F  +L    +    +    +HS +I+ G S    V NS++  Y K   L  
Sbjct: 137 SGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDI 196

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------- 261
           A + F  M  KD V++N MI+GY + G  +EA +LF +M   + +    TF         
Sbjct: 197 ASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVG 256

Query: 262 --------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                                     N L+  Y++    D+A  +   M  L    D  +
Sbjct: 257 SEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPEL----DGVS 312

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           +  +I+G+A NG+  ++ DLFK +             + +S       L+MG + H+ AV
Sbjct: 313 YNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAV 372

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
                 +V VGN+L++MY+KCE+ E A R+F  +  ++   W ++I+ Y Q G+  +A +
Sbjct: 373 VTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALK 432

Query: 416 LFIKMQESDVP-----------------------------------PNVITWNVLISGYI 440
           +F +M   +V                                     +V + +VL+  Y 
Sbjct: 433 MFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYA 492

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
             G+  +A+++F+ M       RN   WN+LI+ Y Q G        F  M  S  YP+ 
Sbjct: 493 NCGSMKDAIEVFKEMP-----DRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDS 547

Query: 501 VTILSVLPACAY--LVAS-----NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
           V+ LSVL AC++  LV       N + +++    RR   +      ++ID   +SG    
Sbjct: 548 VSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYA------TMIDVLCRSGRFNE 601

Query: 554 SRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
           +  +   M    D + W+S++    +H     A    DQ+       +   ++++   ++
Sbjct: 602 AENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYA 661

Query: 613 LAGMVDLGKKVFCSITE 629
            AG  +   KV  ++ E
Sbjct: 662 EAGKWENAAKVKKAMRE 678



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 135/542 (24%), Positives = 243/542 (44%), Gaps = 87/542 (16%)

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           ++K G        N  L   V+  ++  AR+ F+ M  ++  + N M+SGY +      A
Sbjct: 37  IVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRA 96

Query: 243 HRLFDKM-CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
             LF+ M  R E+                                        +WT MI 
Sbjct: 97  RELFESMFSRNEV----------------------------------------SWTIMIG 116

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
           G++QN +  +A +L+ EM   GV P+ +T  + +S   D   L   ++IHS  ++ GF+ 
Sbjct: 117 GYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSA 176

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
            ++V NSL++ Y K   L+ A ++F  +  KD  S+N MI GY + G+  +A +LF++M+
Sbjct: 177 SLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMR 236

Query: 422 ESDVPPNVITW-----------------------------------NVLISGYIQNGNED 446
             D  P+  T+                                   N L+  Y ++   D
Sbjct: 237 NMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYID 296

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
            A +LF  M + D V     S+N +I GY   GQ   +  +F+++Q + F        ++
Sbjct: 297 LAKNLFDEMPELDGV-----SYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATM 351

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
           L   A  +  +  ++ H   +  +  S + V N+L+D YAK      +  IF  ++ ++ 
Sbjct: 352 LSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNS 411

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
           + W ++I  YV  GF   AL +F +M    +  ++ TF S + A +    V LGK++  S
Sbjct: 412 VPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSS 471

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI--WEALLTACRIHGN 684
           +     ++  +   S ++D+Y   G +++A+E  ++M   PD +I  W AL++A   +G+
Sbjct: 472 VIRL-GLLSSVFSGSVLVDMYANCGSMKDAIEVFKEM---PDRNIVCWNALISAYSQNGD 527

Query: 685 ID 686
            +
Sbjct: 528 AE 529



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 151/306 (49%), Gaps = 13/306 (4%)

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
           D ++  +N  +    +A    KA +LF +M       N  + N+++SGY+++ N   A +
Sbjct: 43  DPEISRFNFKLKDLVRANQIAKARQLFDEMPYR----NTSSVNMMVSGYVKSRNLFRARE 98

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           LF+ M       RN  SW  +I GY Q  Q   A  ++ +M  S   P+ +T  ++L   
Sbjct: 99  LFESM-----FSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGF 153

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
                  +V +IH  ++R    +SL V NSL+D+Y K+  +  +  +F  M +KD +++N
Sbjct: 154 DDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFN 213

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF-CSITE 629
            +I GY  +GF   AL LF QM++   +P+  TF +++     +  V  G+++   +I  
Sbjct: 214 VMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKT 273

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            Y  +  I   +A++D Y +   ++ A    ++MP E D   +  ++T    +G  + + 
Sbjct: 274 SY--VWDIFVANALLDFYSKHDYIDLAKNLFDEMP-ELDGVSYNIIITGYAWNGQYEKSF 330

Query: 690 LAIERL 695
              +RL
Sbjct: 331 DLFKRL 336



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 130/281 (46%), Gaps = 7/281 (2%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVK 94
           G   EA+ +   +  +     + T+ + L+A  +  S+ L ++LH + + L     VF  
Sbjct: 425 GFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSG 484

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           + L+ +YA CG + DA EVF++M +RN+  W+A+I AYS++         F  M++ GL+
Sbjct: 485 SVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLY 544

Query: 155 PDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           PD   F  +L AC + G  E      +S+     +   R+   +++ V  + G+   A  
Sbjct: 545 PDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAEN 604

Query: 214 FFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
               M  E D V W+S+++        D A +  D++ + +       +  +   Y + G
Sbjct: 605 LISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAG 664

Query: 273 QCDVAMEMVKRMESLGITP-DVFTWTCM---ISGFAQNGRT 309
           + + A ++ K M   G+     ++W  +   +  F  N RT
Sbjct: 665 KWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVFTANDRT 705



 Score = 42.7 bits (99), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 81/173 (46%), Gaps = 27/173 (15%)

Query: 3   IWILTTFQQLHSLLTKKSNPRFRD--THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTY 60
           +W   +  Q++ L     +PR +   T +D LC +GR NEA  ++  +  +  +V    +
Sbjct: 567 LWYFNSMTQVYKL-----DPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEV---MW 618

Query: 61  INLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
            ++L +C    +  LA+K    L  +  + D      + ++YA+ G  ++A +V + MRE
Sbjct: 619 SSVLNSCRIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRE 678

Query: 120 RNL-----YTWSAM---IGAYSRDQRW--------REVVELFFLMVQDGLFPD 156
           R +     Y+W  +   +  ++ + R         R++  L  LM ++G  PD
Sbjct: 679 RGVKKVTAYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPD 731


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 272/937 (29%), Positives = 441/937 (47%), Gaps = 121/937 (12%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDS--NSIHLARKLHAFLNLVTEI- 89
            +G   +A  +  ++  +G   R    T+ ++L+AC DS  + +  A ++H  ++  TE  
Sbjct: 144  SGLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVS-KTEFT 202

Query: 90   -DVFVKTKLLSVYAKC--GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
             +  V   L+S+Y  C  G    A+ VF+    R+L TW+A++  Y++         LF 
Sbjct: 203  SNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFR 262

Query: 147  LMVQDG----LFPDDFLFPKILQAC--GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
             M  D     L P +  F  ++ A    +C      +L    V+K G S    V +++++
Sbjct: 263  AMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLF-VRVLKSGCSSDLYVGSALVS 321

Query: 201  VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
             + + G L  A+  +  + E++ V  N +I+G  +    + A  +F    R+   + V T
Sbjct: 322  AFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIF-MGARDSAAVNVDT 380

Query: 261  F----------------------------------------NILIRSYNQLGQCDVAMEM 280
            +                                        N L+  Y + G  D A  +
Sbjct: 381  YVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRV 440

Query: 281  VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
             + ME+     D  +W  +I+   QNG    A+  +  M    + P+     S +S+C  
Sbjct: 441  FQLMEA----RDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAG 496

Query: 341  LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
            L  LA G ++H  AVK G   D  V N+L+ MY +C  +     +F+ +   DV SWNS+
Sbjct: 497  LGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSI 556

Query: 401  IAGYCQA-GYCGKAYELFIKMQESDVPPNVITW--------------------------- 432
            +     +     ++ ++F  M +S + PN +T+                           
Sbjct: 557  MGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHG 616

Query: 433  --------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
                    N L+S Y ++G+ D    LF RM      +R+  SWNS+I+GY   G    A
Sbjct: 617  VTEDNAVDNALMSCYAKSGDVDSCERLFSRMSG----RRDAISWNSMISGYIYNGHLQEA 672

Query: 485  LG-VFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID 543
            +  V   M S     +C T   VL ACA + A  +  E+H   LR  LES + V ++L+D
Sbjct: 673  MDCVCLMMHSEQMMDHC-TFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVD 731

Query: 544  TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGT 603
             Y+K G I Y+  +F  MS K+  +WNS+I GY  HG    AL++F++M+  G  P+  T
Sbjct: 732  MYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVT 791

Query: 604  FLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
            F+S++ A S AG+V+ G   F  + E Y I+P IEHYS +IDL GR+G+L++  E+++ M
Sbjct: 792  FVSVLSACSHAGLVERGLDYF-ELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRM 850

Query: 664  PIEPDSSIWEALLTAC---RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
            P++P++ IW  +L AC   +    IDL   A   L +LEP + +   L  + +A  G+ E
Sbjct: 851  PMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRWE 910

Query: 721  DALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS 780
            D  K R   +    +   G+ W+ + + V+TF+ G  S   +  +Y  L  + + +    
Sbjct: 911  DTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKI---- 966

Query: 781  SHSGLCIEEE---------EKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHC 831
             ++G     E          KEE+   HSEKLA+AF L  SS     IRI+KN+R+C  C
Sbjct: 967  RNAGYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGG-PIRIMKNLRVCGDC 1025

Query: 832  HETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            H   +Y+S +   +I L DS   HHFK+G+CSCGDYW
Sbjct: 1026 HTAFRYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 147/667 (22%), Positives = 285/667 (42%), Gaps = 128/667 (19%)

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H  V+K G++    + N ++  Y K  +L  ARR F+ M  ++ V+W  +ISG+   G 
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146

Query: 239 NDEAHRLFDKMCRE---------------------------------------EIKLGVV 259
            ++A  LF  M RE                                       E      
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTT 206

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITP--DVFTWTCMISGFAQNGRTSQALDLFK 317
             N LI  Y   G C V   ++ +      TP  D+ TW  ++S +A+ G       LF+
Sbjct: 207 VCNALISMY---GSCSVGPPILAQ-RVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFR 262

Query: 318 EMSF----VGVMPNGVTITSAISACTDLKALAMGM--EIHSLAVKMGFTDDVLVGNSLIN 371
            M +    + + P   T  S I+A T L + ++G+  ++    +K G + D+ VG++L++
Sbjct: 263 AMQYDDSGIELRPTEHTFGSLITA-TYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVS 321

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
            +++   L+ A+ ++  +K+++  + N +IAG  +  +   A E+F+  ++S    NV T
Sbjct: 322 AFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDS-AAVNVDT 380

Query: 432 WNVLISGY---------IQNGNEDEA------------------VDLFQRMGKNDKV--- 461
           + VL+S           ++ G E  A                  V+++ + G  DK    
Sbjct: 381 YVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRV 440

Query: 462 -----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
                 R+  SWN++I    Q G    A+  +  M+ +   P+    +S L +CA L   
Sbjct: 441 FQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLL 500

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
              +++H   ++  L     V N+L+  Y + G +     IF+ MS+ D+++WNS++ G 
Sbjct: 501 AAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIM-GV 559

Query: 577 VL--HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
           +         ++ +F  M   GL PN+ TF++ + A +   +++LGK++  S+   + + 
Sbjct: 560 MASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIH-SVMLKHGVT 618

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA------ 688
                 +A++  Y +SG ++        M    D+  W ++++    +G++  A      
Sbjct: 619 EDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCL 678

Query: 689 ----------------------VLAIERLFDLEP--------GDVLIQRLILQIYAICGK 718
                                 V A+ER  ++           DV+++  ++ +Y+ CG+
Sbjct: 679 MMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGR 738

Query: 719 PEDALKV 725
            + A KV
Sbjct: 739 IDYASKV 745



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 16/168 (9%)

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
           + +H  V++R L   L + N L+++YAK   +  +R +FDGM  ++ ++W  LI G+VL 
Sbjct: 85  ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144

Query: 580 GFWHAALDLFDQM--KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
           G    A  LF  M  +  G +P   TF S++ A   +G   LG  V     + + ++   
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAV-----QVHGLVSKT 199

Query: 638 EHYS------AMIDLYGRS--GKLEEAMEFIEDMPIEPDSSIWEALLT 677
           E  S      A+I +YG    G    A    +  P+  D   W AL++
Sbjct: 200 EFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVR-DLITWNALMS 246


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 224/753 (29%), Positives = 359/753 (47%), Gaps = 92/753 (12%)

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH--RLFDKMCREEIKLGVV 259
           ++  G L  A   F+ +   D   +N +I  Y        A    L+ +M R  +     
Sbjct: 67  HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF------------------------- 294
           TF   +++ + L        + +     G+  D+F                         
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186

Query: 295 ------TWTCMISGFAQNGRTSQALD--LFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
                  W  M++G+A +G    A+   L  +M    + PN  T+ + +       ALA 
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246

Query: 347 GMEIHSLAV----------KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           G  +H+  +          K   TD VL+G +L++MY+KC  L  A RVFD +  ++  +
Sbjct: 247 GTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306

Query: 397 WNSMIAGYCQAGYCGKAYELFIKM------------------------------------ 420
           W+++I G+       +A+ LF  M                                    
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALL 366

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
            +S V  ++   N L+S Y + G  D+A+ LF  M   D     T S+++L++GY Q G+
Sbjct: 367 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKD-----TVSYSALVSGYVQNGR 421

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
              A  VF+KMQ+    P+  T++S++PAC++L A    +  HG V+ R L S   + N+
Sbjct: 422 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 481

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           LID YAK G I  SR +F+ M S+DI++WN++I GY +HG    A  LF +M + G  P+
Sbjct: 482 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 541

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
             TF+ ++ A S +G+V  GK  F  +   Y + P +EHY  M+DL  R G L+EA EFI
Sbjct: 542 GVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 601

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
           + MP+  D  +W ALL ACR++ NIDL       + +L P       L+  IY+  G+ +
Sbjct: 602 QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFD 661

Query: 721 DALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT--A 778
           +A +VR +++    + S G  WIE+   ++ FV G  S   S  +Y  L N+   +    
Sbjct: 662 EAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLG 721

Query: 779 RSSHSGLCIEEEEKEEISGI---HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETA 835
               +   +++ E+EE       HSEKLA+A+ ++  S+   TI + KN+R+C  CH   
Sbjct: 722 YQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDK-TIFVTKNLRVCGDCHTVI 780

Query: 836 KYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           K++S++    I + D+   HHFKNGQCSCGD+W
Sbjct: 781 KHISLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 204/449 (45%), Gaps = 59/449 (13%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+   L+AC      H  R +H   ++   + D+FV T LL +Y KC CL DA  +F  M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVE--LFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
             R+L  W+AM+  Y+    +   V   L   M    L P+      +L      G    
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246

Query: 176 GKLMHSLVIKLGMSCVRRVRNS-------------VLAVYVKCGKLIWARRFFESMDEKD 222
           G  +H+  I+   +C+   RNS             +L +Y KCG L++ARR F++M  ++
Sbjct: 247 GTSVHAYRIR---ACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 303

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCRE---------------------EIKLG---- 257
            V W+++I G+       +A  LF  M  +                      +++G    
Sbjct: 304 EVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLH 363

Query: 258 -----------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN 306
                      +   N L+  Y + G  D A+ +   M       D  +++ ++SG+ QN
Sbjct: 364 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA----VKDTVSYSALVSGYVQN 419

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           GR  +A  +FK+M    V P+  T+ S I AC+ L AL  G   H   +  G   +  + 
Sbjct: 420 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC 479

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           N+LI+MY+KC  ++ + +VF+M+  +D+ SWN+MIAGY   G   +A  LF++M     P
Sbjct: 480 NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFP 539

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           P+ +T+  L+S    +G   E    F  M
Sbjct: 540 PDGVTFICLLSACSHSGLVIEGKHWFHVM 568



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 216/484 (44%), Gaps = 76/484 (15%)

Query: 105 GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV--VELFFLMVQDGLFPDDFLFPK 162
           G L  A  +F+ +   ++ T++ +I AYS          + L+  M++  + P+++ FP 
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
            L+AC    D   G+ +H   I  G+     V  ++L +YVKC  L  A   F +M  +D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 223 GVAWNSMISGYFQIG--ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC------ 274
            VAWN+M++GY   G   +  AH L  +M    ++    T   L+    Q G        
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 275 --------------------------DVAMEMVKRMESLGITPDVF---------TWTCM 299
                                        ++M  +  SL     VF         TW+ +
Sbjct: 251 HAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGV-MPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           I GF    R +QA  LFK M   G+   +  +I SA+ AC  L  L MG ++H+L  K G
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              D+  GNSL++MY+K   ++ A  +FD +  KD  S++++++GY Q G   +A+ +F 
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430

Query: 419 KMQESDVPPNVITWNVLIS-----GYIQNGNEDEA-----------------VDLFQRMG 456
           KMQ  +V P+  T   LI        +Q+G                      +D++ + G
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490

Query: 457 KNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
           + D  +        R+  SWN++IAGY   G    A  +F +M +  F P+ VT + +L 
Sbjct: 491 RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 550

Query: 509 ACAY 512
           AC++
Sbjct: 551 ACSH 554



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 207/468 (44%), Gaps = 56/468 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRN--TYINLLQ------ACIDSNSIHLARK---LHAFL 83
           +G  + A+  L S+  Q  ++R N  T + LL       A     S+H  R    LH+  
Sbjct: 204 HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYRIRACLHSNR 263

Query: 84  NLVTEID--VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           N  +++   V + T LL +YAKCG L  AR VF+ M  RN  TWSA+IG +    R  + 
Sbjct: 264 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 323

Query: 142 VELFFLMVQDGL-FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
             LF  M+  GL F         L+AC +      G+ +H+L+ K G+       NS+L+
Sbjct: 324 FLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 383

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y K G +  A   F+ M  KD V++++++SGY Q G  +EA  +F KM    ++    T
Sbjct: 384 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAAT 443

Query: 261 F-----------------------------------NILIRSYNQLGQCDVAMEMVKRME 285
                                               N LI  Y + G+ D++ ++   M 
Sbjct: 444 MVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 503

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
           S     D+ +W  MI+G+  +G   +A  LF EM+ +G  P+GVT    +SAC+    + 
Sbjct: 504 SR----DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 559

Query: 346 MGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAG 403
            G    H +    G T  +     ++++ S+   L EA E +  M    DV  W +++ G
Sbjct: 560 EGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL-G 618

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
            C+        +   +M +   P     + +L + Y   G  DEA ++
Sbjct: 619 ACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEV 666


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 232/754 (30%), Positives = 371/754 (49%), Gaps = 86/754 (11%)

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
           LF  I +A  +         +HSL+I LG+         ++A Y        +   F   
Sbjct: 15  LFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLA 74

Query: 219 DEKDGV-AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
              + V  WNS+I      G   EA  L+ +  R  ++    TF  +I +   L   ++A
Sbjct: 75  SPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMA 134

Query: 278 MEMVKRMESLGITPDVF-------------------------------TWTCMISGFAQN 306
             +  R+  +G   D++                               +W  +ISG+  N
Sbjct: 135 KSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNAN 194

Query: 307 GRTSQALDLFKE-----MSFVG-VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           G  ++AL+++ +     M  V    P+ +TITS + AC  L  L  G  +H   +  G+ 
Sbjct: 195 GYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYE 254

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D    N LINMY+KC  L A++ VF  +K KD                           
Sbjct: 255 CDTTASNILINMYAKCGNLLASQEVFSGMKCKDS-------------------------- 288

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
                    ++WN +I+ YIQNG   +++ +F+ M   D +     +WN++IA       
Sbjct: 289 ---------VSWNSMINVYIQNGKMGDSLKVFENMKARDII-----TWNTIIASCVHSED 334

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
            N  L +  +M++    P+  T+LS+LP C+ L A  + KEIHGC+ +  LES +PV N 
Sbjct: 335 CNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNV 394

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           LI+ Y+K G++  S  +F  M +KD++TW +LI    ++G    A+  F +M++ G+ P+
Sbjct: 395 LIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPD 454

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
              F++II A S +G+V+ G   F  + + Y+I P IEHY+ ++DL  RS  L++A +FI
Sbjct: 455 HVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFI 514

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
             MP++PDSSIW ALL+ACR+ G+ ++A    ER+ +L P D     L+  IYA  GK +
Sbjct: 515 LSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVSNIYAALGKWD 574

Query: 721 DALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG-GWSESYSDL--LYSWLQNV--PEN 775
               +RK  +    +   G  W+E++N VY F TG  + E + ++  L   L  +   E 
Sbjct: 575 QVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTGTKFFEQFEEVNKLLGMLAGLMAKEG 634

Query: 776 VTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHET 834
             A        I+E+EK +I   HSE+LA+AF L+ +   P T ++++KN+R+C  CH  
Sbjct: 635 YIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLLNTK--PGTPLQVMKNLRVCEDCHTV 692

Query: 835 AKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            KY+S +   E+ + D+   H FK+G CSCGDYW
Sbjct: 693 TKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 726



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 230/457 (50%), Gaps = 50/457 (10%)

Query: 15  LLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYI--NLLQACIDSNS 72
           L +  +N    ++ +  L  NG  +EA+++     TQ  +++ +TY   +++ AC     
Sbjct: 73  LASPSNNVYLWNSIIRALTHNGLFSEALSLYSE--TQRIRLQPDTYTFPSVINACAGLLD 130

Query: 73  IHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGA 131
             +A+ +H   L++    D+++   L+ +Y +   LD AR+VFE+M  R++ +W+++I  
Sbjct: 131 FEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISG 190

Query: 132 YSRDQRWREVVELF------FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK 185
           Y+ +  W E +E++      F+ + +   PD      ILQACG+ GD E GK +H  +I 
Sbjct: 191 YNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMIT 250

Query: 186 LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRL 245
            G  C     N ++ +Y KCG L+ ++  F  M  KD V+WNSMI+ Y Q G+  ++ ++
Sbjct: 251 SGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKV 310

Query: 246 FDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ 305
           F+ M   +I    +T+N +I S      C++ + M+ RM + G+TPD+            
Sbjct: 311 FENMKARDI----ITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDM------------ 354

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
                                   T+ S +  C+ L A   G EIH    K+G   DV V
Sbjct: 355 -----------------------ATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPV 391

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
           GN LI MYSKC  L  + +VF ++K KDV +W ++I+     G   KA   F +M+ + +
Sbjct: 392 GNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGI 451

Query: 426 PPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
            P+ + +  +I     +G  +E ++ F RM K+ K++
Sbjct: 452 VPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIE 488



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 120/265 (45%), Gaps = 13/265 (4%)

Query: 84  NLVTEIDVFVKTK---------LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
           NL+   +VF   K         +++VY + G + D+ +VFE+M+ R++ TW+ +I +   
Sbjct: 272 NLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVH 331

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
            +     + +   M  +G+ PD      IL  C        GK +H  + KLG+     V
Sbjct: 332 SEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPV 391

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
            N ++ +Y KCG L  + + F+ M  KD V W ++IS     GE  +A R F +M    I
Sbjct: 392 GNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGI 451

Query: 255 KLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQAL 313
               V F  +I + +  G  +  +    RM+    I P +  + C++   +++    +A 
Sbjct: 452 VPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAE 511

Query: 314 DLFKEMSFVGVMPNGVTITSAISAC 338
           D    M    + P+     + +SAC
Sbjct: 512 DFILSMP---LKPDSSIWGALLSAC 533


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 254/899 (28%), Positives = 432/899 (48%), Gaps = 102/899 (11%)

Query: 52   GAKVRRNTYI--NLLQACIDSNSIHLAR---KLHAFLNLVTEI--DVFVKTKLLSVYAKC 104
            G  V  N ++  +L+ AC  S S ++A    ++H F+ + T I  DV+V T L+  Y   
Sbjct: 188  GLGVEPNGFMVASLITAC--SRSGYMADEGFQVHGFV-VKTGILGDVYVGTALVHFYGSI 244

Query: 105  GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKIL 164
            G + +A+++FE+M + N+ +W++++  YS      EV+ ++  M Q+G+  +   F  + 
Sbjct: 245  GLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVT 304

Query: 165  QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
             +CG   D   G  +   +I+ G      V NS+++++     +  A   F+ M+E D +
Sbjct: 305  SSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDII 364

Query: 225  AWNSMISGYFQIGENDEAHRLFDKMCREE------------------------------- 253
            +WN+MIS Y   G   E+ R F  M                                   
Sbjct: 365  SWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLV 424

Query: 254  IKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT 309
            +KLG    V   N L+  Y++ G+ + A  + + M       D+ +W  M++ + Q+G+ 
Sbjct: 425  VKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTER----DLISWNSMMACYVQDGKC 480

Query: 310  SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL 369
               L +  E+  +G + N VT  SA++AC++ + L     +H+L +  GF D ++VGN+L
Sbjct: 481  LDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNAL 540

Query: 370  INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
            + MY K   +  A++V   +   D  +WN++I G+ +     +A + +  ++E  +P N 
Sbjct: 541  VTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANY 600

Query: 430  ITW------------------------------------NVLISGYIQNGNEDEAVDLFQ 453
            IT                                     N LI+ Y + G+ + +  +F 
Sbjct: 601  ITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFD 660

Query: 454  RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
             +G    +     +WN+++A     G    AL +F +M++     +  +    L A A L
Sbjct: 661  GLGNKSPI-----TWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANL 715

Query: 514  VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
                + +++HG V++   ES L V N+ +D Y K G +     +     ++  ++WN LI
Sbjct: 716  AVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILI 775

Query: 574  CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
              +  HG +  A + F +M   G KP+  TF+S++ A +  G+VD G   + S+T  + +
Sbjct: 776  SAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGV 835

Query: 634  IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
             P IEH   +IDL GRSG+L  A  FI++MP+ P+   W +LL ACRIHGN++LA    E
Sbjct: 836  FPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAE 895

Query: 694  RLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFV 753
             L +L+P D     L   + A  GK ED   +RK    N  +      W+++K+ V++F 
Sbjct: 896  HLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSF- 954

Query: 754  TGGWSESY-------SDLLYSWLQNVPE-NVTARSSHSGLCIEEEEKEEISGIHSEKLAL 805
              G  E Y       S  L   ++   E      +S +   ++EE+KE     HSE+LAL
Sbjct: 955  --GMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLWNHSERLAL 1012

Query: 806  AFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
            AF LI + ++  T+RI KN+R+C  CH   K+VS +   +I L D    HHF  G+CSC
Sbjct: 1013 AFGLINTPESS-TLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 182/696 (26%), Positives = 320/696 (45%), Gaps = 80/696 (11%)

Query: 76  ARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
            + LHAF  + +  + +F    L+++Y+K G ++ AR VF++MR RN  +WS M+  Y R
Sbjct: 113 GKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVR 172

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRR 193
              + E V LF  M   G+ P+ F+   ++ AC   G   + G  +H  V+K G+     
Sbjct: 173 VGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVY 232

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
           V  +++  Y   G +  A++ FE M + + V+W S++ GY   G   E   ++ +M +E 
Sbjct: 233 VGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEG 292

Query: 254 IKLGVVTFNILIRS----------YNQLGQ---------CDVAMEMVKRMESLGITP--- 291
           +     TF  +  S          Y  LG            VA  ++    S        
Sbjct: 293 VSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEAC 352

Query: 292 ---------DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
                    D+ +W  MIS +A +G   ++L  F  M  +    N  T++S +S C+ + 
Sbjct: 353 YVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVD 412

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
            L  G  IH L VK+G   +V + N+L+ +YS+    E AE VF  + ++D+ SWNSM+A
Sbjct: 413 NLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMA 472

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITW------------------------------ 432
            Y Q G C    ++  ++ +     N +T+                              
Sbjct: 473 CYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHD 532

Query: 433 -----NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
                N L++ Y + G   EA  + Q M + D+V     +WN+LI G+ +  + N A+  
Sbjct: 533 FLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRV-----TWNALIGGHAENEEPNEAVKA 587

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE---IHGCVLRRSLESSLPVMNSLIDT 544
           ++ ++      N +T++SVL AC+     + +K    IH  ++    ES   V NSLI  
Sbjct: 588 YKLIREKGIPANYITMVSVLGACS--APDDLLKHGMPIHAHIVLTGFESDDYVKNSLITM 645

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           YAK G++  S  IFDG+ +K  ITWN+++     HG    AL +F +M++ G+  ++ +F
Sbjct: 646 YAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSF 705

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
              + A +   +++ G+++   + +       +   +A +D+YG+ G++ + ++ +   P
Sbjct: 706 SGGLAATANLAVLEEGQQLHGLVIK-LGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQ-P 763

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
           I      W  L++A   HG    A      +  L P
Sbjct: 764 INRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 799



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 169/371 (45%), Gaps = 12/371 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSI-HLARKLHAFLNLVT-EIDVF 92
           N   NEA+     I  +G      T +++L AC   + +      +HA + L   E D +
Sbjct: 578 NEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDY 637

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           VK  L+++YAKCG L+ +  +F+ +  ++  TW+AM+ A +      E +++F  M   G
Sbjct: 638 VKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVG 697

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           +  D F F   L A  N    E G+ +H LVIKLG      V N+ + +Y KCG++    
Sbjct: 698 VNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVL 757

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           +       +  ++WN +IS + + G   +A   F +M +   K   VTF  L+ + N  G
Sbjct: 758 KMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGG 817

Query: 273 QCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
             D  +     M    G+ P +    C+I    ++GR S A    KEM    V PN +  
Sbjct: 818 LVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMP---VPPNDLAW 874

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDD---VLVGNSLINMYSKCEELEAAERVF-- 386
            S ++AC     L +  +     +++  +DD   VL  N +     K E++E   +    
Sbjct: 875 RSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSN-VCATSGKWEDVENLRKEMGS 933

Query: 387 DMIKDKDVYSW 397
           + IK +   SW
Sbjct: 934 NNIKKQPACSW 944



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/475 (22%), Positives = 213/475 (44%), Gaps = 42/475 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFV 93
           +G+  + + +L  +   G  +   T+ + L AC +   +  ++ +HA + +    D + V
Sbjct: 477 DGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIV 536

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+++Y K G + +A++V + M + +  TW+A+IG ++ ++   E V+ + L+ + G+
Sbjct: 537 GNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGI 596

Query: 154 FPDDFLFPKILQACGNCGD-FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             +      +L AC    D  + G  +H+ ++  G      V+NS++ +Y KCG L  + 
Sbjct: 597 PANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSN 656

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------NIL 264
             F+ +  K  + WN+M++     G  +EA ++F +M    + L   +F        N+ 
Sbjct: 657 YIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLA 716

Query: 265 IRSYNQ--------------LGQCDVAMEM---------VKRMESLGITPDVFTWTCMIS 301
           +    Q              L   + AM+M         V +M    I     +W  +IS
Sbjct: 717 VLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILIS 776

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH-SLAVKMGFT 360
            FA++G   +A + F EM  +G  P+ VT  S +SAC     +  G+  + S+  + G  
Sbjct: 777 AFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVF 836

Query: 361 DDVLVGNSLINMYSKCEELEAAER-VFDMIKDKDVYSWNSMIAG---YCQAGYCGKAYEL 416
             +     +I++  +   L  AE  + +M    +  +W S++A    +       K  E 
Sbjct: 837 PGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEH 896

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
            +++  SD    V+  NV  +    +G  ++  +L + MG N+  K+   SW  L
Sbjct: 897 LLELDPSDDSAYVLYSNVCAT----SGKWEDVENLRKEMGSNNIKKQPACSWVKL 947



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 176/418 (42%), Gaps = 45/418 (10%)

Query: 339 TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN 398
           +++ +   G  +H+  +       +   N+LINMYSK   +E A  VFD ++ ++  SW+
Sbjct: 105 SEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWS 164

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI-----SGYIQN----------- 442
           +M++GY + G   +A  LF +M    V PN      LI     SGY+ +           
Sbjct: 165 TMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVK 224

Query: 443 --------------------GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
                               G    A  LF+ M  +     N  SW SL+ GY   G   
Sbjct: 225 TGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDH-----NVVSWTSLMVGYSDSGNPG 279

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
             L V+++M+      N  T  +V  +C  L       ++ G +++   E S+ V NSLI
Sbjct: 280 EVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLI 339

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
             ++   ++  +  +FD M+  DII+WN++I  Y  HG    +L  F  M+    + N  
Sbjct: 340 SMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNST 399

Query: 603 TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           T  S++   S    +  G+ +   + +   +   +   + ++ LY  +G+ E+A E +  
Sbjct: 400 TLSSLLSVCSSVDNLKWGRGIHGLVVK-LGLDSNVCICNTLLTLYSEAGRSEDA-ELVFQ 457

Query: 663 MPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
              E D   W +++ AC +     L  L I     L+ G V+         A C  PE
Sbjct: 458 AMTERDLISWNSMM-ACYVQDGKCLDGLKILAEL-LQMGKVMNHVTFASALAACSNPE 513



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 133/281 (47%), Gaps = 14/281 (4%)

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALG-VFRKMQSSCFYPNCVTIL 504
           +  V+ F    K+D +K + A       G ++ G  +  +  VF + Q + +   C+  +
Sbjct: 45  ETPVENFAEQVKDDDLKTSNA-------GSRRWGCLDGDIAKVFLQQQHTDYGIRCLNAV 97

Query: 505 SV-LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
           +  L   + + +    K +H   +  S+   +   N+LI+ Y+K GNI ++R +FD M  
Sbjct: 98  NFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRH 157

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG-MVDLGKK 622
           ++  +W++++ GYV  G +  A+ LF QM   G++PN     S+I A S +G M D G +
Sbjct: 158 RNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQ 217

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
           V   + +   I+  +   +A++  YG  G +  A +  E+MP + +   W +L+      
Sbjct: 218 VHGFVVKT-GILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLMVGYSDS 275

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDAL 723
           GN    +   +R+   + G    Q     + + CG  ED +
Sbjct: 276 GNPGEVLNVYQRM--RQEGVSGNQNTFATVTSSCGLLEDQV 314


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  351 bits (901), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 253/800 (31%), Positives = 397/800 (49%), Gaps = 83/800 (10%)

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E ++L   M +  +  D+ +F  +++ C      E G  ++S+ +    S    + N+ L
Sbjct: 77  EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELGNAFL 136

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---------- 249
           A++V+ G L+ A   F  M E++  +WN ++ GY + G  DEA  L+ +M          
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDV 196

Query: 250 --------------------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKR 283
                                      R   +L +   N LI  Y + G    A  +  R
Sbjct: 197 YTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256

Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
           M       D+ +W  MISG+ +NG   + L LF  M  + V P+ +T+TS ISAC  L  
Sbjct: 257 MPR----RDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGD 312

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
             +G +IH+  +  GF  D+ V NSL  MY        AE++F  +  KD+ SW +MI+G
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISG 372

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN----- 458
           Y       KA + +  M +  V P+ IT   ++S     G+ D  V+L +   K      
Sbjct: 373 YEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432

Query: 459 -----------------DKV--------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
                            DK         ++N  SW S+IAG +   +   AL  FR+M+ 
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKM 492

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS--LESSLPVMNSLIDTYAKSGNI 551
           +   PN +T+ + L ACA + A    KEIH  VLR    L+  LP  N+L+D Y + G +
Sbjct: 493 T-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP--NALLDMYVRCGRM 549

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             +   F+    KD+ +WN L+ GY   G     ++LFD+M    ++P+  TF+S++   
Sbjct: 550 NIAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGC 608

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
             + MV  G   F  + E Y + P ++HY+ ++DL GR+G+L+EA +FI+ MP+ PD ++
Sbjct: 609 GKSQMVRQGLMYFSKMEE-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667

Query: 672 WEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
           W ALL ACRIH NIDL  L+ +R+F+L+ G V    L+  +YA CGK  +  KVR++ +E
Sbjct: 668 WGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKE 727

Query: 732 NTRRNSFGQCWIEVKNLVYTFVTGG----WSESYSDLLYSWLQNVPE-NVTARSSHSGLC 786
           N      G  W+EVK  V+ F++       ++  + +L  + + + E  +T  S  S + 
Sbjct: 728 NGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMSEVGLTTSSESSSMD 787

Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
             E  ++EI   HSE+ A+AF LI S      I + KN+ MC  CH+T K++S     EI
Sbjct: 788 ETEISRDEIFCGHSERKAIAFGLINSVPG-MPIWVTKNLNMCESCHDTVKFISKTVRREI 846

Query: 847 FLADSKCLHHFKNGQCSCGD 866
            + DS+  HHFK+G+CSCGD
Sbjct: 847 SVRDSEHFHHFKDGECSCGD 866



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 158/550 (28%), Positives = 270/550 (49%), Gaps = 71/550 (12%)

Query: 28  HLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLV 86
            L  LC NG+L EA+ +L+S+      V  + ++ L++ C    +     K+++  L+ +
Sbjct: 65  QLHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSM 124

Query: 87  TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
             + V +    L+++ + G L DA  VF  M ERNL++W+ ++G Y++   + E + L+ 
Sbjct: 125 NSLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYH 184

Query: 147 LMV-QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
            M+   G+ PD + FP +L+ CG   D   G+ +H  V++ G      V N+++ +YVKC
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKC 244

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF------------------- 246
           G +  AR  F+ M  +D ++WN+MISGYF+ G   E  +LF                   
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVI 304

Query: 247 -------DKMCREEIKLGVVTF---------NILIRSYNQLGQCDVAMEMVKRMESLGIT 290
                  D+    +I   V+T          N L + Y   G    A ++  RM+     
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMD----C 360

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
            D+ +WT MISG+  N    +A+D ++ M    V P+ +T+ + +SAC  L  L  G+E+
Sbjct: 361 KDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL 420

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H LA+K      V+V N+LINMYSKC+ ++ A  +F  I  K+V SW S+IAG      C
Sbjct: 421 HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRC 480

Query: 411 GKAYELFIKMQESDVPPNV---------------------ITWNVLISGY-IQNGNEDEA 448
            +A   F +M+ + + PN                      I  +VL +G  + +   +  
Sbjct: 481 FEALIFFRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNAL 539

Query: 449 VDLFQRMGKN-------DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
           +D++ R G+        +  K++ +SWN L+ GY + GQ +  + +F +M  +   P+ +
Sbjct: 540 LDMYVRCGRMNIAWNQFNSQKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEI 599

Query: 502 TILSVLPACA 511
           T +S+L  C 
Sbjct: 600 TFISLLCGCG 609



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 98/203 (48%), Gaps = 7/203 (3%)

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           G+   A+ +   MQ      +    ++++  C +  A  +  +++   L      S+ + 
Sbjct: 73  GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVELG 132

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF-GL 597
           N+ +  + + GN+V +  +F  MS +++ +WN L+ GY   G++  A+ L+ +M    G+
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGV 192

Query: 598 KPNRGTFLSIILAHSLAGMVDL--GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           KP+  TF  ++   +  G+ DL  G++V   +   Y     I+  +A+I +Y + G ++ 
Sbjct: 193 KPDVYTFPCVL--RTCGGIPDLARGREVHVHVVR-YGYELDIDVVNALITMYVKCGDVKS 249

Query: 656 AMEFIEDMPIEPDSSIWEALLTA 678
           A    + MP   D   W A+++ 
Sbjct: 250 ARLLFDRMP-RRDIISWNAMISG 271



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 16/225 (7%)

Query: 76  ARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
            +++HA  L     +D F+   LL +Y +CG ++ A   F + +++++ +W+ ++  YS 
Sbjct: 517 GKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQF-NSQKKDVSSWNILLTGYSE 575

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
             +   VVELF  MV+  + PD+  F  +L  CG       G +  S + + G++   + 
Sbjct: 576 RGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKMEEYGVTPNLKH 635

Query: 195 RNSVLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISG-----YFQIGENDEAHRLFDK 248
              V+ +  + G+L  A +F + M    D   W ++++         +GE   A R+F  
Sbjct: 636 YACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGEL-SAQRIF-- 692

Query: 249 MCREEIKLGVVTFNILI-RSYNQLGQCDVAMEMVKRMESLGITPD 292
               E+  G V + IL+   Y   G+     ++ + M+  G+T D
Sbjct: 693 ----ELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD 733


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 239/757 (31%), Positives = 376/757 (49%), Gaps = 100/757 (13%)

Query: 162 KILQACGNCGDFEAGKLMHSLVIKLGM-----SCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           +IL     C   +  K +H+ +++ G+     S  +    S L+ +     L +AR  F+
Sbjct: 27  QILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSF---STLDYARNLFD 83

Query: 217 SMDEKDGVAWNSMISGY------------------------------FQIGENDE--AHR 244
            + + +   WN++I  Y                              F I    E  A R
Sbjct: 84  QIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASR 143

Query: 245 LFDKMCREEIKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT-PDVFTWTCM 299
           +   +    IKL     +   N L+R Y   G   +A  + K     GI+  DV +W  M
Sbjct: 144 VGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFK-----GISCKDVVSWNSM 198

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           IS FAQ      AL+LF +M    VMPN VT+   +SAC     L  G  + S   + G 
Sbjct: 199 ISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGI 258

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             D+ + N++++MY+KC  ++ A++                               LF +
Sbjct: 259 KVDLTLCNAMLDMYTKCGSVDDAQK-------------------------------LFDE 287

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M E DV     +W +++ GY + G+ D A  +F  M       +  A+WN LI+ Y+Q G
Sbjct: 288 MPERDV----FSWTIMLDGYAKMGDYDAARLVFNAMPV-----KEIAAWNVLISAYEQNG 338

Query: 480 QKNNALGVFRKMQ-SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           +   AL +F ++Q S    P+ VT++S L ACA L A +    IH  + R  +  +  ++
Sbjct: 339 KPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLI 398

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           +SL+D YAK G++  +  +F  +  +D+  W+++I G  +HG   AA+DLF +M+   +K
Sbjct: 399 SSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVK 458

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           PN  TF +++ A S AG+VD G+  F  +   Y ++P ++HY+ M+D+ GR+G LEEAME
Sbjct: 459 PNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAME 518

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
            I +M   P +S+W ALL AC +H N++L  LA ++L  LEP +     L+  IYA  G+
Sbjct: 519 LINEMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGR 578

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA 778
            E   ++RKL R+   +   G   IE    V+ F+ G  +   S  +YS L+ +   + +
Sbjct: 579 WEKVSELRKLMRDTELKKEPGCSSIEANGNVHEFLVGDNTHPLSSNIYSKLEEIATKLKS 638

Query: 779 -----RSSHSGLCIEEEE-KEEISGIHSEKLALAFALIGSSQAP-HTIRIVKNIRMCVHC 831
                  SH    IEE++ KE+   +HSEKLA+AF L+  + AP   IR+VKN+R+C  C
Sbjct: 639 VGYEPNKSHLLQLIEEDDLKEQALSLHSEKLAIAFGLV--TLAPSQPIRVVKNLRICGDC 696

Query: 832 HETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           H  AK VS ++  +I L D    HHF++G CSC DYW
Sbjct: 697 HAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCMDYW 733



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 142/527 (26%), Positives = 229/527 (43%), Gaps = 81/527 (15%)

Query: 56  RRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL--SVYAKCGCLDDARE 112
           R +  ++ +  C  S  +   +++HA  L      D F  +KL   S  +    LD AR 
Sbjct: 24  RNHQILSTIDKCSSSKQL---KEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDYARN 80

Query: 113 VFEDMRERNLYTWSAMIGAY-SRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG 171
           +F+ + + NLYTW+ +I AY S    ++  V    L+ +    P+ F FP +++A     
Sbjct: 81  LFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELK 140

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
               G  +H + IKL       + NS++  Y  CG L  A R F+ +  KD V+WNSMIS
Sbjct: 141 ASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMIS 200

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------------------ 261
            + Q    ++A  LF KM RE +    VT                               
Sbjct: 201 AFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKV 260

Query: 262 -----NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFA------------ 304
                N ++  Y + G  D A ++   M       DVF+WT M+ G+A            
Sbjct: 261 DLTLCNAMLDMYTKCGSVDDAQKLFDEMPE----RDVFSWTIMLDGYAKMGDYDAARLVF 316

Query: 305 -------------------QNGRTSQALDLFKEMSFVGVM-PNGVTITSAISACTDLKAL 344
                              QNG+  +AL +F E+    +  P+ VT+ S +SAC  L A+
Sbjct: 317 NAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAI 376

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
            +G  IH    + G   +  + +SL++MY+KC  LE A  VF  ++++DVY W++MIAG 
Sbjct: 377 DLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGL 436

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
              G    A +LF +MQE+ V PN +T+  ++      G  DE    F  M     V   
Sbjct: 437 GMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPE 496

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
              +  ++    + G    A+ +  +M ++   P+     ++L AC+
Sbjct: 497 MKHYACMVDILGRAGFLEEAMELINEMSTT---PSASVWGALLGACS 540



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 78/146 (53%), Gaps = 2/146 (1%)

Query: 35  NGRLNEAITVLDSIA-TQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVF 92
           NG+  EA+ + + +  ++ AK    T ++ L AC    +I L   +H ++      ++  
Sbjct: 337 NGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCH 396

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           + + L+ +YAKCG L+ A EVF  + ER++Y WSAMI       R +  ++LFF M +  
Sbjct: 397 LISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAK 456

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKL 178
           + P+   F  +L AC + G  + G++
Sbjct: 457 VKPNSVTFTNVLCACSHAGLVDEGRV 482


>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 204/585 (34%), Positives = 313/585 (53%), Gaps = 47/585 (8%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            P    +  +I   + +    +AL L+  M   G+ P+ +T    I AC +      G+ 
Sbjct: 128 NPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLL 187

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H+  VK GF  D  + +SLI++Y+  ++L AA+++F++   +DV               
Sbjct: 188 VHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDV--------------- 232

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
                               ++WN +I GY+++     A  +F RM     V R+  SWN
Sbjct: 233 --------------------VSWNAMIDGYVKHVEMGHARMVFDRM-----VCRDVISWN 267

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           ++I GY   G+ N AL +F +M++    P   T++S+L ACA+L A +K   +H  +   
Sbjct: 268 TMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDN 327

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            +E +  V  +L+D YAK G I  +  +F+ M SKD++ WN++I G  +HG    A  LF
Sbjct: 328 RIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLF 387

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            +MK  G++PN  TF++I+ A S AGMVD G+K+   ++  Y I P +EHY  +IDL  R
Sbjct: 388 KEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLAR 447

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +G LEEAME I  MP+EP+ S   ALL  CRIHGN +L  +  +RL +L+P       L+
Sbjct: 448 AGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILL 507

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             IYA   K +DA KVR L + N      G   IE+K +V+ FV G WS   S+ +Y  L
Sbjct: 508 SNIYAAAKKWDDARKVRNLMKVNGISKVPGVSVIELKGMVHRFVAGDWSHPESNKIYEKL 567

Query: 770 QNVPENVTARSSHSG------LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
             +   + +   +S       L +EEE+KE    +HSEKLA+A+ L+    +   IRIVK
Sbjct: 568 NEIHTRLKSAIGYSADTGNVLLDMEEEDKEHALAVHSEKLAIAYGLL-HLDSKEAIRIVK 626

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+R+C  CH   K +S ++  EI + D    HHF++G+CSC D+W
Sbjct: 627 NLRVCRDCHHVIKLISKVYGREIIVRDRNRFHHFEDGECSCLDFW 671



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 189/402 (47%), Gaps = 44/402 (10%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A+ +F  ++      ++++I A S  +   E + L+  M+Q GL PD   +P +++AC  
Sbjct: 119 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 178

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
                 G L+H+ V+K G  C   + +S++ +Y     L  A++ F     +D V+WN+M
Sbjct: 179 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 238

Query: 230 ISGYFQIGENDEAHRLFDKM-CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
           I GY +  E   A  +FD+M CR+     V+++N +I  Y   G+ + A+ +  +M ++G
Sbjct: 239 IDGYVKHVEMGHARMVFDRMVCRD-----VISWNTMINGYAICGKPNEALALFDQMRAVG 293

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
           + P                                      T+ S +SAC  L AL  G+
Sbjct: 294 VKP-----------------------------------TEATVVSLLSACAHLGALDKGL 318

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
            +H+         + +VG +L++MY+KC ++  A +VF+ ++ KDV +WN++IAG    G
Sbjct: 319 HLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHG 378

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
              +A +LF +M+E+ V PN IT+  ++S     G  DE   L   M  +  ++     +
Sbjct: 379 NVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHY 438

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             +I    + G    A+ +   M      PN   + ++L  C
Sbjct: 439 GCVIDLLARAGFLEEAMELIGTMP---MEPNPSALGALLGGC 477



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 173/405 (42%), Gaps = 56/405 (13%)

Query: 1   FFIWILTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTY 60
           F  +  T F  L     +   P   ++ +  L  +    EA+ +  ++   G K    TY
Sbjct: 115 FLAYAKTIFHHL-----QNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTY 169

Query: 61  INLLQAC--------------------------IDSNSIHL---ARKLHA---FLNLVTE 88
             +++AC                          I S+ IHL    + L A     NL + 
Sbjct: 170 PFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSA 229

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            DV     ++  Y K   +  AR VF+ M  R++ +W+ MI  Y+   +  E + LF  M
Sbjct: 230 RDVVSWNAMIDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQM 289

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
              G+ P +     +L AC + G  + G  +H+ +    +     V  +++ +Y KCGK+
Sbjct: 290 RAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKI 349

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             A + F +M+ KD +AWN++I+G    G   EA +LF +M    ++   +TF  ++ + 
Sbjct: 350 SLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSAC 409

Query: 269 NQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           +  G  D   +++  M  S GI P V  + C+I   A+ G   +A++L      +G MP 
Sbjct: 410 SHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMEL------IGTMPM 463

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
               ++       L AL  G  IH       F    +VG  LIN+
Sbjct: 464 EPNPSA-------LGALLGGCRIHG-----NFELGEMVGKRLINL 496


>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 217/714 (30%), Positives = 356/714 (49%), Gaps = 80/714 (11%)

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           +S YAK   LD AR++F+ M +R + +W+ MI +YS+  R+ E + L + M +  +   +
Sbjct: 39  ISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSE 98

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
             F  +L  C        GKL+H LV+K G      V +++L  Y  C ++  ARR F+ 
Sbjct: 99  STFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDV 158

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
           +  ++ V W+ M+ GY      D+A  +F KM R                          
Sbjct: 159 LVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRR------------------------- 193

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGR-TSQALDLFKEMSFVG-VMPNGVTITSAI 335
                         DV  WT +ISGF++NG    +AL++F+ M   G   PN  T    +
Sbjct: 194 --------------DVVAWTTLISGFSKNGDGCGKALEIFRLMMRSGETTPNEFTFDCVV 239

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE------------------ 377
            AC  L  L++G  +H L +K G   D  +G +L+  Y +CE                  
Sbjct: 240 RACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLN 299

Query: 378 -------------ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
                         +E AE VF+ + + +  S+N MI GY   G    +  LF KM    
Sbjct: 300 ALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMP--- 356

Query: 425 VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
               + + N +IS Y +NG  D+A++LF+   KN+K   +  +WNS+I+GY   GQ   A
Sbjct: 357 -CRTIFSSNTMISVYSRNGEIDKALELFEET-KNEK---DPVTWNSMISGYIHSGQPEEA 411

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           L ++  M          T  ++  AC+ L + ++ + +H  +++   ES++ V  SLID 
Sbjct: 412 LKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDM 471

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           Y+K G+I+ ++T F  + S ++  W +LI G+  HG    A+ LFD+M   GL PN  TF
Sbjct: 472 YSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATF 531

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           + ++ A S AG+V+ G K+F S+  CY + P +EHY+ ++DL GRSG + EA EFI+ MP
Sbjct: 532 VGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMP 591

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
           +E D  +W ALL+AC    ++++     E++F  +P  +    ++  IYA  G+  + + 
Sbjct: 592 LEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMM 651

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA 778
           VRK+ R    +   G  WIE+ N ++ F     S  Y +++Y+ L+++  N+ +
Sbjct: 652 VRKILRGFKVKKDPGCSWIELNNKIHVFSIEDRSHPYCNMIYATLEHLTANINS 705



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 137/532 (25%), Positives = 241/532 (45%), Gaps = 74/532 (13%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACI------DSNSIH----- 74
           +T +     +GR +EA+ ++ S+     K+  +T+ ++L  C       D   IH     
Sbjct: 67  NTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLK 126

Query: 75  --------LARKLHAFLNLVTEI-------DVFVK------TKLLSVYAKCGCLDDAREV 113
                   +   L  F     EI       DV V+      + +L  Y  C  +DDA  V
Sbjct: 127 SGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSV 186

Query: 114 FEDMRERNLYTWSAMIGAYSRD-QRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCG 171
           F  M  R++  W+ +I  +S++     + +E+F LM++ G   P++F F  +++ACG  G
Sbjct: 187 FVKMPRRDVVAWTTLISGFSKNGDGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLG 246

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC-------------------------- 205
               G+ +H L++K G+     +  +++  Y +C                          
Sbjct: 247 ILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIE 306

Query: 206 -----GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CREEIKLGVV 259
                G++  A   F  M E + V++N MI GY   G+ D++ RLF+KM CR      + 
Sbjct: 307 GLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRT-----IF 361

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           + N +I  Y++ G+ D A+E+ +  ++     D  TW  MISG+  +G+  +AL L+  M
Sbjct: 362 SSNTMISVYSRNGEIDKALELFEETKN---EKDPVTWNSMISGYIHSGQPEEALKLYITM 418

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
             + +     T ++   AC+ L +L  G  +H+  +K  F  +V VG SLI+MYSKC  +
Sbjct: 419 HRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSI 478

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
             A+  F  I   +V +W ++I G+   G   +A  LF +M E  + PN  T+  ++S  
Sbjct: 479 MEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSAC 538

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            + G  +E + +F  M +   V      +  ++    + G    A    +KM
Sbjct: 539 SRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKM 590



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/372 (23%), Positives = 162/372 (43%), Gaps = 50/372 (13%)

Query: 5   ILTTFQQLHSLLTK---KSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYI 61
           IL+  + +H LL K   + +P      ++F C    +++A+ V   +         N  +
Sbjct: 247 ILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVV--------NPCL 298

Query: 62  NLLQACIDSNSIHLARKLHAFL--NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
           N L + I+   I + R   A L  N +TE++      ++  YA  G +DD++ +FE M  
Sbjct: 299 NALNSLIE-GLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPC 357

Query: 120 RNLY--------------------------------TWSAMIGAYSRDQRWREVVELFFL 147
           R ++                                TW++MI  Y    +  E ++L+  
Sbjct: 358 RTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYIT 417

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M +  +      F  +  AC   G    G+L+H+ +IK        V  S++ +Y KCG 
Sbjct: 418 MHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGS 477

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           ++ A+  F S+   +  AW ++I+G+   G   EA  LFD+M  + +     TF  ++ +
Sbjct: 478 IMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGLAPNGATFVGVLSA 537

Query: 268 YNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            ++ G  +  M++   ME    +TP +  + C++    ++G   +A +  K+M       
Sbjct: 538 CSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEA--- 594

Query: 327 NGVTITSAISAC 338
           +GV   + +SAC
Sbjct: 595 DGVVWGALLSAC 606



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 123/261 (47%), Gaps = 4/261 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           +G+  EA+ +  ++     +  ++T+  L  AC    S+H  + LHA L     E +V+V
Sbjct: 405 SGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAHLIKTPFESNVYV 464

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +Y+KCG + +A+  F  +   N+  W+A+I  ++      E + LF  M++ GL
Sbjct: 465 GTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDRMIEQGL 524

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            P+   F  +L AC   G    G K+ HS+     ++        V+ +  + G +  A 
Sbjct: 525 APNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAE 584

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
            F + M  E DGV W +++S  +   + +   R+ +KM   + K  + ++ IL   Y  L
Sbjct: 585 EFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPK-PISSYVILSNIYAGL 643

Query: 272 GQCDVAMEMVKRMESLGITPD 292
           G+    M + K +    +  D
Sbjct: 644 GRWREKMMVRKILRGFKVKKD 664



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/381 (21%), Positives = 162/381 (42%), Gaps = 72/381 (18%)

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            +++  N  I+ Y+K  +L+ A ++FD +  + V SWN+MI+ Y + G   +A  L   M
Sbjct: 30  SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSM 89

Query: 421 QESDVPPNVITWNVLISG----------------YIQNGNED-----EAVDLFQ----RM 455
             S +  +  T++ ++S                  +++G+E       A+  F      +
Sbjct: 90  HRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEI 149

Query: 456 GKNDK-----VKRNTASWNSLIAGYQQLGQKNNALGVFRK-------------------- 490
           G+  +     V+RN   W+ ++ GY      ++AL VF K                    
Sbjct: 150 GEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNG 209

Query: 491 -------------MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
                        M+S    PN  T   V+ AC  L   +  + +HG +++  LE    +
Sbjct: 210 DGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSI 269

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
             +L++ Y +   I  +  +  G+ +  +   NSLI G +  G    A  +F+ M     
Sbjct: 270 GGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEM-- 327

Query: 598 KPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
             N  ++  +I  +++ G +D  K++F  +  C  I       + MI +Y R+G++++A+
Sbjct: 328 --NPVSYNLMIKGYAVGGQMDDSKRLFEKM-PCRTIFS----SNTMISVYSRNGEIDKAL 380

Query: 658 EFIEDMPIEPDSSIWEALLTA 678
           E  E+   E D   W ++++ 
Sbjct: 381 ELFEETKNEKDPVTWNSMISG 401



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 10/166 (6%)

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
            ++KE       +S  S +   N  I  YAK   +  +R +FD M  + +++WN++I  Y
Sbjct: 14  QRLKEFKLYTAHQSNLSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSY 73

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC----SITECYQ 632
             HG +  AL L   M    +K +  TF S++   +    +  GK + C    S +E ++
Sbjct: 74  SKHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFE 133

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           ++      SA++  Y    ++ EA   + D+ +  +  +W  +L  
Sbjct: 134 LVG-----SALLYFYASCFEIGEARR-VFDVLVRRNEVLWSLMLVG 173


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 197/588 (33%), Positives = 318/588 (54%), Gaps = 57/588 (9%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           +VF+W  +I+  A++G + +AL  F  M  + + PN  T   AI +C+ L  L  G + H
Sbjct: 40  NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
             A+  GF  D+ V ++L++MYSKC EL  A  +FD I  +                   
Sbjct: 100 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHR------------------- 140

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                           N+++W  +I+GY+QN +   A+ +F  M + D +     SWNS+
Sbjct: 141 ----------------NIVSWTSMITGYVQNDDAHRALRVFDGMAERDVI-----SWNSI 179

Query: 472 IAGYQQLGQKNNALGVFRKM-QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           IA Y Q G    ++ +F +M +      N VT+ +VL ACA+  +    K IH  V++  
Sbjct: 180 IAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMG 239

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           LES++ V  S+ID Y K G +  +R  FD M  K++ +W++++ GY +HG    AL++F 
Sbjct: 240 LESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFY 299

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           +M   G+KPN  TF+S++ A S AG+++ G   F +++  + + P +EHY  M+DL GR+
Sbjct: 300 EMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRA 359

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           G L+EA + I+ M + PD  +W ALL ACR+H N+DL  ++  +LF+L+P +     L+ 
Sbjct: 360 GYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLS 419

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ 770
            IYA  G+ ED  ++R L + +      G   +++K  V+ F+ G       + +Y +L+
Sbjct: 420 NIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLE 479

Query: 771 N----------VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIR 820
                      VP+  +         +  EEKE +  +HSEKLA+AF ++ +     TI 
Sbjct: 480 KLSMKLQEVGYVPDMTSVLHD-----VGHEEKEMVLRVHSEKLAVAFGIMNTVPGT-TIH 533

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           I+KN+R+C  CH   K++S +   EI + DSK  HHF++G CSCGDYW
Sbjct: 534 IIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 581



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 190/393 (48%), Gaps = 47/393 (11%)

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           N+++W+++I   +R     E +  F  M +  L P+   FP  +++C    D  +G+  H
Sbjct: 40  NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 99

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
              +  G      V ++++ +Y KCG+L  AR  F+ +  ++ V+W SMI+GY Q   ND
Sbjct: 100 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQ---ND 156

Query: 241 EAH---RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
           +AH   R+FD M   +    V+++N +I  Y Q G    +ME+  RM   G         
Sbjct: 157 DAHRALRVFDGMAERD----VISWNSIIAVYAQNGMSTESMEIFHRMVKDG--------- 203

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
                               E+++     N VT+++ + AC    +  +G  IH   +KM
Sbjct: 204 --------------------EINY-----NAVTLSAVLLACAHSGSQRLGKCIHDQVIKM 238

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           G   +V VG S+I+MY KC ++E A + FD +++K+V SW++M+AGY   G+  +A E+F
Sbjct: 239 GLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVF 298

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
            +M  + V PN IT+  +++     G  +E    F+ M     V+     +  ++    +
Sbjct: 299 YEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGR 358

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            G    A  + + M+     P+ V   ++L AC
Sbjct: 359 AGYLKEAFDLIKGMK---LRPDFVVWGALLGAC 388



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 184/396 (46%), Gaps = 42/396 (10%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           L  +G   EA+    S+     K  R+T+   +++C     +H  R+ H   L    E D
Sbjct: 51  LARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPD 110

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQ-------------- 136
           +FV + L+ +Y+KCG L DAR +F+++  RN+ +W++MI  Y ++               
Sbjct: 111 LFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAE 170

Query: 137 ----RWREVV-------------ELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAGKL 178
                W  ++             E+F  MV+DG +  +      +L AC + G    GK 
Sbjct: 171 RDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKC 230

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H  VIK+G+     V  S++ +Y KCGK+  AR+ F+ M EK+  +W++M++GY   G 
Sbjct: 231 IHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGH 290

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWT 297
             EA  +F +M    +K   +TF  ++ + +  G  +      K M     + P V  + 
Sbjct: 291 AKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYG 350

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           CM+    + G   +A DL K M    + P+ V   + + AC   K + +G EI   A K+
Sbjct: 351 CMVDLLGRAGYLKEAFDLIKGMK---LRPDFVVWGALLGACRMHKNVDLG-EIS--ARKL 404

Query: 358 GFTDDVLVGNSLI--NMYSKCEELEAAERVFDMIKD 391
              D    G  ++  N+Y+     E  ER+  ++K+
Sbjct: 405 FELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKN 440



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 145/352 (41%), Gaps = 77/352 (21%)

Query: 420 MQESDVPPNVIT--WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
           M+ S+    VIT  W +    Y  N N      LF +       K N  SWNS+IA   +
Sbjct: 1   MKISNSTSVVITFSWKIYRRRYSNNPN---LTTLFNKYVD----KTNVFSWNSVIAELAR 53

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
            G    AL  F  M+     PN  T    + +C+ L+  +  ++ H   L    E  L V
Sbjct: 54  SGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFV 113

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM----- 592
            ++L+D Y+K G +  +RT+FD +S ++I++W S+I GYV +   H AL +FD M     
Sbjct: 114 SSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDV 173

Query: 593 ---------------------------KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
                                      K   +  N  T  +++LA + +G   LGK +  
Sbjct: 174 ISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHD 233

Query: 626 SITEC---------YQIIPM---------------------IEHYSAMIDLYGRSGKLEE 655
            + +            II M                     ++ +SAM+  YG  G  +E
Sbjct: 234 QVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKE 293

Query: 656 AMEFIEDM---PIEPDSSIWEALLTACRIHGNIDLA---VLAIERLFDLEPG 701
           A+E   +M    ++P+   + ++L AC   G ++       A+   FD+EPG
Sbjct: 294 ALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPG 345


>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 788

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 214/659 (32%), Positives = 347/659 (52%), Gaps = 49/659 (7%)

Query: 254 IKLGVV-----TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR 308
           I+LGV      T N L+  Y +LG  D A  +   M +     DV TW  M+ G+  NG 
Sbjct: 135 IRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPAR----DVVTWNSMVDGYVSNGL 190

Query: 309 TSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
            + AL  F+EM   + V  +GV I +A++AC    AL  G E+H+  ++ G   DV VG 
Sbjct: 191 GTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREVHAYVIRHGMEHDVKVGT 250

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           S+++MY KC ++ +AE VF  +  + V +WN MI GY       +A++ F++M+      
Sbjct: 251 SILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQV 310

Query: 428 NVITW-NVL--------------ISGYIQNGN-------EDEAVDLFQRMGK---NDKV- 461
            V+T  N+L              + GYI           E   ++++ ++GK   ++KV 
Sbjct: 311 EVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVF 370

Query: 462 ----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASN 517
                +   SWN++IA Y        A+ +F  + +   YP+  T+ +V+PA   L    
Sbjct: 371 GQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLR 430

Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
           + +++H  ++R     +  +MN+++  YA+ G+++ SR IFD M++KD+I+WN++I GY 
Sbjct: 431 QCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYA 490

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
           +HG   +AL++F +MK  GL+PN  TF+S++ A S++G+ D G   F S+   Y +IP I
Sbjct: 491 IHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSGLTDEGWTQFNSMQRDYGMIPQI 550

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
           EHY  M DL GR+G L+E M+FIE+MPI+P   +W +LLTA R   +ID+A  A ER+F 
Sbjct: 551 EHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRVWGSLLTASRNRNDIDIAEYAAERIFQ 610

Query: 698 LEPGDVLIQR-----LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTF 752
           LE   +         LI  +YA  G+ +D  +++ L  E   R +  +  +E+  +  +F
Sbjct: 611 LEQDQLEHDNTGCYVLISSMYADAGRWKDVERIKSLMEEKGLRRTDPRSIVELHGISCSF 670

Query: 753 VTGGWSESYSDLLY---SWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFAL 809
           V G  +   S ++    ++L      +    + S     +  +      HS +LA+ F L
Sbjct: 671 VNGDTTHPQSKMIQEVSNFLSGKIGEMRDPMNQSDPTSLDSRRTTEPNKHSVRLAVVFGL 730

Query: 810 IGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           I S++A   I + KN+R+C  CH   K +S      I + D+   H F +G C CGDYW
Sbjct: 731 I-STEARTPILVKKNVRICNDCHHALKLISKYSGRRIVVGDTNIYHQFSDGSCCCGDYW 788



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 207/446 (46%), Gaps = 54/446 (12%)

Query: 57  RNTYINLLQACIDSNSIHLARKLH-AFLNL-VTEIDVFVKTKLLSVYAKCGCLDDAREVF 114
           R T+  +L+ C    ++   R  H A + L V   DV+    LL+ YA+ G +DDA  VF
Sbjct: 108 RFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVF 167

Query: 115 EDMRERNLYTWSAMIGAYSRDQR-------WREVVELFFLMVQDGLFPDDFLFPKILQAC 167
           + M  R++ TW++M+  Y  +         +RE+ E   L VQ     D       L AC
Sbjct: 168 DGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEA--LEVQH----DGVGIIAALAAC 221

Query: 168 GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
                   G+ +H+ VI+ GM    +V  S+L +Y KCG +  A   F +M  +  V WN
Sbjct: 222 CLESALMQGREVHAYVIRHGMEHDVKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWN 281

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------------------------- 261
            MI GY      +EA   F +M  E  ++ VVT                           
Sbjct: 282 CMIGGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRR 341

Query: 262 ---------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
                      L+  Y+++G+   + ++  +M     T  + +W  MI+ +       +A
Sbjct: 342 QFLPHVVLETALLEMYSKVGKVKSSEKVFGQM----TTKTLVSWNNMIAAYMYKEMYMEA 397

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
           + LF ++    + P+  T+++ + A   L  L    ++HS  +++G+ ++ L+ N++++M
Sbjct: 398 ITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHM 457

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y++C ++ ++  +FD +  KDV SWN+MI GY   G    A E+F +M+ + + PN  T+
Sbjct: 458 YARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTF 517

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKN 458
             +++    +G  DE    F  M ++
Sbjct: 518 VSVLTACSVSGLTDEGWTQFNSMQRD 543



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 140/294 (47%), Gaps = 8/294 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFV 93
           N R  EA      +  +G +V   T INLL AC  + S    R +H ++     +  V +
Sbjct: 290 NERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVL 349

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           +T LL +Y+K G +  + +VF  M  + L +W+ MI AY   + + E + LF  ++   L
Sbjct: 350 ETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPL 409

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           +PD F    ++ A    G     + MHS +I+LG      + N+++ +Y +CG ++ +R 
Sbjct: 410 YPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDVLSSRE 469

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M  KD ++WN+MI GY   G+   A  +F +M    ++    TF  ++ + +  G 
Sbjct: 470 IFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTACSVSGL 529

Query: 274 CDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            D        M+   G+ P +  + CM     + G      DL + M F+  MP
Sbjct: 530 TDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAG------DLKEVMQFIENMP 577



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/427 (23%), Positives = 185/427 (43%), Gaps = 71/427 (16%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           PD FT+  +                                   +  C  L AL  G   
Sbjct: 106 PDRFTFPVV-----------------------------------LKCCARLGALDEGRAA 130

Query: 351 HSLAVKMGF-TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           HS A+++G    DV  GNSL+  Y++   ++ AERVFD +  +DV +WNSM+ GY   G 
Sbjct: 131 HSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERVFDGMPARDVVTWNSMVDGYVSNGL 190

Query: 410 CGKAYELFIKMQES-DVPPNVITW----------NVLISG------YIQNGNEDEA---- 448
              A   F +M E+ +V  + +            + L+ G       I++G E +     
Sbjct: 191 GTLALVCFREMHEALEVQHDGVGIIAALAACCLESALMQGREVHAYVIRHGMEHDVKVGT 250

Query: 449 --VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
             +D++ + G     +        R   +WN +I GY    +   A   F +M++     
Sbjct: 251 SILDMYCKCGDIASAEGVFATMPSRTVVTWNCMIGGYALNERPEEAFDCFVQMKAEGHQV 310

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
             VT +++L ACA   +S   + +HG + RR     + +  +L++ Y+K G +  S  +F
Sbjct: 311 EVVTAINLLAACAQTESSLYGRSVHGYITRRQFLPHVVLETALLEMYSKVGKVKSSEKVF 370

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
             M++K +++WN++I  Y+    +  A+ LF  + +  L P+  T  +++ A  L G++ 
Sbjct: 371 GQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLR 430

Query: 619 LGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
             +++   I    Y    +I   +A++ +Y R G +  + E  + M  + D   W  ++ 
Sbjct: 431 QCRQMHSYIIRLGYGENTLI--MNAIMHMYARCGDVLSSREIFDKMAAK-DVISWNTMIM 487

Query: 678 ACRIHGN 684
              IHG 
Sbjct: 488 GYAIHGQ 494


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 210/626 (33%), Positives = 333/626 (53%), Gaps = 55/626 (8%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           +VF+W  +I+  A++G + +AL  F  M  + + PN  T   AI +C+ L  L  G + H
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
             A+  GF  D+ V ++L++MYSKC EL  A  +FD I  +++ SW SMI GY Q     
Sbjct: 176 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAH 235

Query: 412 KAYELFIKM------QESD-------------------VPPNVITWNV---LISGYIQN- 442
           +A  LF +        E D                   V    IT  V   LI    +  
Sbjct: 236 RALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGD 295

Query: 443 -GNEDEAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM-Q 492
            G E+  +D + + G+        +   +R+  SWNS+IA Y Q G    ++ +F +M +
Sbjct: 296 LGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVK 355

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
                 N VT+ +VL ACA+  +    K IH  V++  LES++ V  S+ID Y K G + 
Sbjct: 356 DGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVE 415

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            +R  FD M  K++ +W++++ GY +HG    AL++F +M   G+KPN  TF+S++ A S
Sbjct: 416 MARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACS 475

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
            AG+++ G   F +++  + + P +EHY  M+DL GR+G L+EA + I+ M + PD  +W
Sbjct: 476 HAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVW 535

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
            ALL ACR+H N+DL  ++  +LF+L+P +     L+  IYA  G+ ED  ++R L + +
Sbjct: 536 GALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNS 595

Query: 733 TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPENVTARSSH 782
                 G   +++K  V+ F+ G       + +Y +L+           VP+  +     
Sbjct: 596 GLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHD- 654

Query: 783 SGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMH 842
               +  EEKE +  +HSEKLA+AF ++ +     TI I+KN+R+C  CH   K++S + 
Sbjct: 655 ----VGHEEKEMVLRVHSEKLAVAFGIMNTVPGT-TIHIIKNLRVCGDCHTAIKFISKIV 709

Query: 843 HCEIFLADSKCLHHFKNGQCSCGDYW 868
             EI + DSK  HHF++G CSCGDYW
Sbjct: 710 DREIVVRDSKRFHHFRDGLCSCGDYW 735



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 207/433 (47%), Gaps = 49/433 (11%)

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           N+++W+++I   +R     E +  F  M +  L P+   FP  +++C    D  +G+  H
Sbjct: 116 NVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAH 175

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
              +  G      V ++++ +Y KCG+L  AR  F+ +  ++ V+W SMI+GY Q   ND
Sbjct: 176 QQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQ---ND 232

Query: 241 EAHR---LFDKMCREE------------------------------IKLGVVTFNILIRS 267
           +AHR   LF +   EE                              I  GV  F I    
Sbjct: 233 DAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGF 292

Query: 268 YNQLGQCDVAMEMVKRMESLGITP---------DVFTWTCMISGFAQNGRTSQALDLFKE 318
              LG  +  M+   +   LG++          DV +W  +I+ +AQNG +++++++F  
Sbjct: 293 EGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHR 352

Query: 319 MSFVG-VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
           M   G +  N VT+++ + AC    +  +G  IH   +KMG   +V VG S+I+MY KC 
Sbjct: 353 MVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCG 412

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           ++E A + FD +++K+V SW++M+AGY   G+  +A E+F +M  + V PN IT+  +++
Sbjct: 413 KVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLA 472

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
                G  +E    F+ M     V+     +  ++    + G    A  + + M+     
Sbjct: 473 ACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMK---LR 529

Query: 498 PNCVTILSVLPAC 510
           P+ V   ++L AC
Sbjct: 530 PDFVVWGALLGAC 542



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 209/476 (43%), Gaps = 86/476 (18%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEID 90
           L  +G   EA+    S+     K  R+T+   +++C     +H  R+ H   L    E D
Sbjct: 127 LARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPD 186

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF--FLM 148
           +FV + L+ +Y+KCG L DAR +F+++  RN+ +W++MI  Y ++      + LF  FL+
Sbjct: 187 LFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLV 246

Query: 149 VQDG------LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
            + G      +  D      +L AC    +    + +H  +IK G      V N+++  Y
Sbjct: 247 EESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAY 306

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE-EIKLGVVTF 261
            KCG+L  +RR F+ M E+D ++WNS+I+ Y Q G + E+  +F +M ++ EI    VT 
Sbjct: 307 AKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTL 366

Query: 262 NI-----------------------------------LIRSYNQLGQCDVAMEMVKRMES 286
           +                                    +I  Y + G+ ++A +   RM  
Sbjct: 367 SAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMRE 426

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
                +V +W+ M++G+  +G   +AL++F EM+  GV PN +T  S ++AC+    L  
Sbjct: 427 ----KNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEE 482

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G                                +A    FD+  +  V  +  M+    +
Sbjct: 483 GWHW----------------------------FKAMSHEFDV--EPGVEHYGCMVDLLGR 512

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED----EAVDLFQRMGKN 458
           AGY  +A++L   M+   + P+ + W  L+     + N D     A  LF+   KN
Sbjct: 513 AGYLKEAFDLIKGMK---LRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKN 565



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 141/323 (43%), Gaps = 53/323 (16%)

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
           K N  SWNS+IA   + G    AL  F  M+     PN  T    + +C+ L+  +  ++
Sbjct: 114 KTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQ 173

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
            H   L    E  L V ++L+D Y+K G +  +RT+FD +S ++I++W S+I GYV +  
Sbjct: 174 AHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDD 233

Query: 582 WHAALDLFDQM--------------------------------KSF-----------GLK 598
            H AL LF +                                 KS            G +
Sbjct: 234 AHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFE 293

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
            + G   +++ A++  G + + ++VF  + E   I      ++++I +Y ++G   E+ME
Sbjct: 294 GDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVI-----SWNSIIAVYAQNGMSTESME 348

Query: 659 ----FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE-PGDVLIQRLILQIY 713
                ++D  I  ++    A+L AC   G+  L     +++  +    +V +   I+ +Y
Sbjct: 349 IFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMY 408

Query: 714 AICGKPEDALKVRKLERENTRRN 736
             CGK E A K     RE   ++
Sbjct: 409 CKCGKVEMARKAFDRMREKNVKS 431



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 22/180 (12%)

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
           G VLRR   S+ P + +L + Y    N+                +WNS+I      G   
Sbjct: 91  GAVLRRRY-SNNPNLTTLFNKYVDKTNV---------------FSWNSVIAELARSGDSV 134

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL--GKKVFCSITECYQIIPMIEHYS 641
            AL  F  M+   LKPNR TF   I   S + ++DL  G++        +   P +   S
Sbjct: 135 EALRAFSSMRKLSLKPNRSTFPCAI--KSCSALLDLHSGRQAHQQAL-IFGFEPDLFVSS 191

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
           A++D+Y + G+L +A    +++      S W +++T    + +   A+L  +     E G
Sbjct: 192 ALVDMYSKCGELRDARTLFDEISHRNIVS-WTSMITGYVQNDDAHRALLLFKEFLVEESG 250


>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
 gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  350 bits (899), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 213/584 (36%), Positives = 317/584 (54%), Gaps = 15/584 (2%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            P+VF +  +I G  QN    +A+  + +M      PN  T  +   ACT  +A   G++
Sbjct: 92  NPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQ 151

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H+  +K G + DV + ++ I MY    E+E A R+     + DV  +N+MI GY + G 
Sbjct: 152 VHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGE 211

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
              A ELF  M++     NV +WNV++SG  + G  +EA +LF     N+  ++N  SW+
Sbjct: 212 VEAAKELFWSMEDK----NVGSWNVMVSGMAKCGMIEEARELF-----NEMKEKNEISWS 262

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           ++I GY + G    AL VF  MQ     P    + SVL ACA L A ++ + IH  V   
Sbjct: 263 AMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNN 322

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
           S      +  +L+D YAK G +  +  +F+ M  K++ TWN++ICG  +HG    A++LF
Sbjct: 323 SNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELF 382

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            +M+    +PN  T L ++ A + +GMVD G ++F S+ E Y I P +EHY  ++DL GR
Sbjct: 383 FKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGR 442

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +G L EA E +  MP+EP +++W ALL ACR HG+++L     + L +LEP +     L+
Sbjct: 443 AGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALL 502

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             IYA  G+ +D   VRKL +E   + S G   I+   +V+ F  G  S      +Y  L
Sbjct: 503 SNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVHEFKMGDGSHPQMKNIYLML 562

Query: 770 QNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
           +N+      E  +  +S     IEEEEKE     HSEKLA+AF LI +     TI +VKN
Sbjct: 563 KNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAIAFGLINTKPGT-TIHVVKN 621

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +RMC  CH   K +S ++  EI + D    HHFK G CSC D+W
Sbjct: 622 LRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKDFW 665



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 208/406 (51%), Gaps = 12/406 (2%)

Query: 53  AKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKC--GCLDD 109
           +++ + T ++LL     S S+H  +++HA  L      D +V   L+  YA      L+ 
Sbjct: 24  SQLSQKTILDLLNT-KSSTSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNF 82

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A +VFE +   N++ ++ +I    ++    + +  ++ M+     P+ F +P + +AC  
Sbjct: 83  ALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTA 142

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
               E G  +H+ VIK G+S    +R++ + +Y   G++  ARR        D + +N+M
Sbjct: 143 AEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAM 202

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           I GY + GE + A  LF  M  E+  +G  ++N+++    + G  + A E+   M+    
Sbjct: 203 IDGYLKCGEVEAAKELFWSM--EDKNVG--SWNVMVSGMAKCGMIEEARELFNEMKE--- 255

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             +  +W+ MI G+ + G   +AL++F  M    + P    ++S ++AC +L AL  G  
Sbjct: 256 -KNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRW 314

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           IH+       + D ++G +L++MY+KC  L+ A  VF+ ++ K+V++WN+MI G    G 
Sbjct: 315 IHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGR 374

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
              A ELF KMQ+    PN IT   ++S    +G  DE + +F  M
Sbjct: 375 AEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSM 420



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 152/299 (50%), Gaps = 5/299 (1%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           ++S  AKCG +++ARE+F +M+E+N  +WSAMI  Y +   ++E +E+F +M ++ + P 
Sbjct: 233 MVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPR 292

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            F+   +L AC N G  + G+ +H+ V     S    +  +++ +Y KCG+L  A   FE
Sbjct: 293 KFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFE 352

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            M++K+   WN+MI G    G  ++A  LF KM +++ +   +T   ++ +    G  D 
Sbjct: 353 KMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDE 412

Query: 277 AMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            + +   ME + GI P +  + C++    + G   +A ++   M    + P+     + +
Sbjct: 413 GLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMP---MEPSAAVWGALL 469

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
            AC     + +G  +  + +++   +       L N+Y++    +    V  ++K++ V
Sbjct: 470 GACRKHGDVELGERVGKILLELEPQNSGRYA-LLSNIYARAGRWDDVANVRKLMKERGV 527



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 121/264 (45%), Gaps = 4/264 (1%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT- 87
           +D     G   EA+ V + +  +  + R+    ++L AC +  ++   R +HA++N  + 
Sbjct: 265 IDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSN 324

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
             D  + T L+ +YAKCG LD A +VFE M ++ ++TW+AMI       R  + +ELFF 
Sbjct: 325 SFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFK 384

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M +    P+      +L AC + G  + G ++ +S+    G+         V+ +  + G
Sbjct: 385 MQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAG 444

Query: 207 KLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            L  A     SM  E     W +++    + G+ +   R+  K+  E        + +L 
Sbjct: 445 LLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERV-GKILLELEPQNSGRYALLS 503

Query: 266 RSYNQLGQCDVAMEMVKRMESLGI 289
             Y + G+ D    + K M+  G+
Sbjct: 504 NIYARAGRWDDVANVRKLMKERGV 527


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 223/753 (29%), Positives = 355/753 (47%), Gaps = 92/753 (12%)

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH--RLFDKMCREEIKLGVV 259
           ++  G L  A   F+ +   D   +N +I  Y        A    L+ +M R  +     
Sbjct: 67  HIASGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNY 126

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF------------------------- 294
           TF   +++ + L        + +     G+  D+F                         
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186

Query: 295 ------TWTCMISGFAQNGRTSQALD--LFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
                  W  M++G+A +G    A+   L  +M    + PN  T+ + +       ALA 
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246

Query: 347 GMEIHSLAV----------KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           G  +H+  +          K   TD VL+G +L++MY+KC  L  A RVFD +  ++  +
Sbjct: 247 GTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVT 306

Query: 397 WNSMIAGYCQAGYCGKAYELFIKM------------------------------------ 420
           W+++I G+       +A+ LF  M                                    
Sbjct: 307 WSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALL 366

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
            +S V  ++   N L+S Y + G  D+A+ LF  M   D     T S+++L++GY Q G+
Sbjct: 367 AKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKD-----TVSYSALVSGYVQNGR 421

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
              A  VF+KMQ+    P+  T++S++PAC++L A    +  HG V+ R L S   + N+
Sbjct: 422 AEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNA 481

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           LID YAK G I  SR +F+ M S+DI++WN++I GY +HG    A  LF +M + G  P+
Sbjct: 482 LIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPD 541

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
             TF+ ++ A S +G+V  GK  F  +   Y + P +EHY  M+DL  R G L+EA EFI
Sbjct: 542 GVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFI 601

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
           + MP+  D  +W ALL ACR++ NIDL       + +L P       L+  IY+  G+ +
Sbjct: 602 QSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFD 661

Query: 721 DALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS 780
           +A +VR +++    + S G  WIE+   ++ FV G  S   S  +Y  L N+   +    
Sbjct: 662 EAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLG 721

Query: 781 SHSGLCIEEEEKEEISGI-----HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETA 835
                    ++ EE         HSEKLA+A+ ++  S+   TI + KN+R+C  CH   
Sbjct: 722 YQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDK-TIFVTKNLRVCGDCHTVI 780

Query: 836 KYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           K++S++    I + D+   HHFKNGQCSCGD+W
Sbjct: 781 KHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 205/450 (45%), Gaps = 59/450 (13%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+   L+AC      H  R +H   ++   + D+FV T LL +Y KC CL DA  +F  M
Sbjct: 127 TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 186

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVE--LFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
             R+L  W+AM+  Y+    +   V   L   M    L P+      +L      G    
Sbjct: 187 PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 246

Query: 176 GKLMHSLVIKLGMSCVRRVRNS-------------VLAVYVKCGKLIWARRFFESMDEKD 222
           G  +H+  I+   +C+   RNS             +L +Y KCG L++ARR F++M  ++
Sbjct: 247 GTSVHAYCIR---ACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 303

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCRE---------------------EIKLG---- 257
            V W+++I G+       +A  LF  M  +                      +++G    
Sbjct: 304 EVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLH 363

Query: 258 -----------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN 306
                      +   N L+  Y + G  D A+ +   M       D  +++ ++SG+ QN
Sbjct: 364 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA----VKDTVSYSALVSGYVQN 419

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           GR  +A  +FK+M    V P+  T+ S I AC+ L AL  G   H   +  G   +  + 
Sbjct: 420 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC 479

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           N+LI+MY+KC  ++ + +VF+M+  +D+ SWN+MIAGY   G   +A  LF++M     P
Sbjct: 480 NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFP 539

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMG 456
           P+ +T+  L+S    +G   E    F  MG
Sbjct: 540 PDGVTFICLLSACSHSGLVIEGKHWFHVMG 569



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 218/484 (45%), Gaps = 76/484 (15%)

Query: 105 GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV--VELFFLMVQDGLFPDDFLFPK 162
           G L  A  +F+ +   ++ T++ +I AYS          + L+  M++  + P+++ FP 
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
            L+AC    D   G+ +H   I  G+     V  ++L +YVKC  L  A   F +M  +D
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPARD 190

Query: 223 GVAWNSMISGYFQIG--ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ------- 273
            VAWN+M++GY   G   +  AH L  +M    ++    T   L+    Q G        
Sbjct: 191 LVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSV 250

Query: 274 ---CDVA----------------------MEMVKRMESLGITPDVF---------TWTCM 299
              C  A                      ++M  +  SL     VF         TW+ +
Sbjct: 251 HAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSAL 310

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGV-MPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           I GF    R +QA  LFK M   G+   +  +I SA+ AC  L  L MG ++H+L  K G
Sbjct: 311 IGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSG 370

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              D+  GNSL++MY+K   ++ A  +FD +  KD  S++++++GY Q G   +A+ +F 
Sbjct: 371 VHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFK 430

Query: 419 KMQESDVPPNVITWNVLIS-----GYIQNGNEDEA-----------------VDLFQRMG 456
           KMQ  +V P+  T   LI        +Q+G                      +D++ + G
Sbjct: 431 KMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCG 490

Query: 457 KNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
           + D  +        R+  SWN++IAGY   G    A  +F +M +  F P+ VT + +L 
Sbjct: 491 RIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLS 550

Query: 509 ACAY 512
           AC++
Sbjct: 551 ACSH 554



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 205/468 (43%), Gaps = 56/468 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFL--------- 83
           +G  + A+  L S+  Q  ++R N  T + LL       ++     +HA+          
Sbjct: 204 HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR 263

Query: 84  NLVTEID--VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           N  +++   V + T LL +YAKCG L  AR VF+ M  RN  TWSA+IG +    R  + 
Sbjct: 264 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 323

Query: 142 VELFFLMVQDGL-FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
             LF  M+  GL F         L+AC +      G+ +H+L+ K G+       NS+L+
Sbjct: 324 FLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 383

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y K G +  A   F+ M  KD V++++++SGY Q G  +EA  +F KM    ++    T
Sbjct: 384 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAAT 443

Query: 261 F-----------------------------------NILIRSYNQLGQCDVAMEMVKRME 285
                                               N LI  Y + G+ D++ ++   M 
Sbjct: 444 MVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 503

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
           S     D+ +W  MI+G+  +G   +A  LF EM+ +G  P+GVT    +SAC+    + 
Sbjct: 504 SR----DIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 559

Query: 346 MGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAG 403
            G    H +    G T  +     ++++ S+   L EA E +  M    DV  W +++ G
Sbjct: 560 EGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL-G 618

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
            C+        +   +M +   P     + +L + Y   G  DEA ++
Sbjct: 619 ACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEV 666


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 233/787 (29%), Positives = 394/787 (50%), Gaps = 80/787 (10%)

Query: 61  INLLQACIDSNSIHLARKLHAFLNLVTEID----VFVKTKLLSVYAKCGCLDDAREVFED 116
           + +L+ C+ +  + L  ++HA   +   +     + + T+LL +Y       DA  VF  
Sbjct: 36  LAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSA 95

Query: 117 MRERNLYT---WSAMIGAYSRDQRWREVVELFFLMV---QDGLFPDDFLFPKILQACGNC 170
           +      +   W+ +I  ++   +    V LF++ +        PD    P ++++C   
Sbjct: 96  LPRAAAASSLPWNWLIRGFTAAGQHHLAV-LFYVKMWSHPAAPSPDAHTLPYVVKSCAAL 154

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
           G    G+L+H     +G++    V ++++ +Y   G L  AR  F+ + E+D V WN M+
Sbjct: 155 GAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMM 214

Query: 231 SGYFQIGENDEAHRLFDKM------------------CREE-------------IKLG-- 257
            G  + G+ D A RLF  M                  C  +             +K G  
Sbjct: 215 DGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLE 274

Query: 258 --VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             V   N L+  Y +  QC   ++   R+  L    D+ TW  MISG  QNG   +A  L
Sbjct: 275 PEVAVANTLLAMYAKC-QC---LDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGL 330

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           F +M   G  P+ +T+ S + A TDL  L  G E+H   V+     DV + ++L+++Y K
Sbjct: 331 FYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFK 390

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT-WNV 434
           C ++  A+ ++D  +  DV   ++MI+GY   G   +A ++F  + E  + PN +T  +V
Sbjct: 391 CRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASV 450

Query: 435 L--------------ISGYIQNGN-------EDEAVDLFQRMGKND--------KVKRNT 465
           L              I GY+           E   +D++ + G+ D          +++ 
Sbjct: 451 LPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDE 510

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
            +WNS+I+ + Q G+   AL +FR+M       N +TI + L ACA L A    KEIHG 
Sbjct: 511 VTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGV 570

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
            ++  +++ +   ++LID YAK GN+  +  +F+ M  K+ ++WNS+I  Y  HG    +
Sbjct: 571 TIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKES 630

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           + L   M+  G KP+  TFL++I A + AG+V+ G ++F  +T+ Y I P +EH++ M+D
Sbjct: 631 VSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVD 690

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           LY RSGKL++A++FI DMP +PD+ IW ALL ACR+H N++LA +A + LF L+P +   
Sbjct: 691 LYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPANSGY 750

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
             L+  I A+ G+ +   KVR+L ++N      G  W++V N  + FV    S   S+ +
Sbjct: 751 YVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDI 810

Query: 766 YSWLQNV 772
           Y+ L+ +
Sbjct: 811 YTSLKTL 817



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/408 (23%), Positives = 181/408 (44%), Gaps = 48/408 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVF 92
           NG   EA  +   +   GA+    T ++LL A  D N +   +++H ++  N V  +DVF
Sbjct: 321 NGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVN-MDVF 379

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           + + L+ +Y KC  +  A+ +++  R  ++   S MI  Y  +    E +++F  +++  
Sbjct: 380 LVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQC 439

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P+      +L  C +      G+ +H  V++        V ++++ +Y KCG+L  + 
Sbjct: 440 IKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSH 499

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------- 261
             F  M +KD V WNSMIS + Q G+  EA  LF +MC E IK   +T            
Sbjct: 500 YIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLP 559

Query: 262 ------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDV--FT 295
                                   + LI  Y + G  ++A+ + + M      PD    +
Sbjct: 560 AIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFM------PDKNEVS 613

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  +IS +  +G   +++ L   M   G  P+ VT  + ISAC     +  G+++     
Sbjct: 614 WNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMT 673

Query: 356 KMGFTDDVLVGNS-LINMYSKCEELEAA-ERVFDMIKDKDVYSWNSMI 401
           K       +   + ++++YS+  +L+ A + + DM    D   W +++
Sbjct: 674 KKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALL 721


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 236/876 (26%), Positives = 412/876 (47%), Gaps = 114/876 (13%)

Query: 25  RDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN 84
           R  HL  L  N +      +    + Q    ++ T+ ++ Q C +  +I+  ++ HA + 
Sbjct: 8   RVLHLPIL--NSQTTPPYAIHSISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQIT 65

Query: 85  LVTEID-VFVKTKLLSVYAKC-------------------------------GCLDDARE 112
           +   +  VFV   LL  Y KC                               G ++ A+ 
Sbjct: 66  VTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQF 125

Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD 172
           +F+ M ER++ +W++M+  Y ++   R+ +E+F  M    +  D   F  +L+AC    D
Sbjct: 126 LFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIED 185

Query: 173 FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISG 232
           +  G  +H L I++G         +++ +Y  C KL  A   F  M E++ V W+++I+G
Sbjct: 186 YGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAG 245

Query: 233 YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-----------------------YN 269
           Y +     E  +L+  M  E + +   TF    RS                       Y+
Sbjct: 246 YVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYD 305

Query: 270 QL---------GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
            +          +CD  ++  K   +    P   +   +I G+A+  +  +AL++F+ + 
Sbjct: 306 NIVGTATLDMYAKCDRMVDARKVFNTFP-NPTRQSHNALIVGYARQDQVLEALEIFRSLQ 364

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
              +  + ++++ A++AC+ +K    G+++H LAVK G   ++ V N++++MY+KC  L 
Sbjct: 365 KSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALM 424

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-- 438
            A  +FD ++ KD  SWN++IA + Q  +  +   LF+ M  S + P+  T+  ++    
Sbjct: 425 EACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACA 484

Query: 439 --------------YIQNGNE------DEAVDLFQRMG---KNDKV-----KRNTASWNS 470
                          I++G           +D++ + G   + +K+     +R T SWNS
Sbjct: 485 GKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNS 544

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +I+G+    Q  NAL  F +M      P+  T  +VL  CA L      K+IHG +L+  
Sbjct: 545 IISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQ 604

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           L S + + ++++D Y+K GN+  SR +F+    +D +TW+++IC Y  HG    A+ LF+
Sbjct: 605 LHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFE 664

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           +M+   +KPN   F+S++ A +  G VD G   F  +   Y + P +EHYS M+DL GRS
Sbjct: 665 EMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRS 724

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           G++ EA+E IE MP E D  IW  LL  CR+ GN+++A  A   L  L+P D     L+ 
Sbjct: 725 GQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLS 784

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS--- 767
            +YAI G   +  K+R   +    +   G  WI+V++ V+ F+ G  +   S+ +Y    
Sbjct: 785 NVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTH 844

Query: 768 -------WLQNVPENVTARSSHSGLCIEEEEKEEIS 796
                  W   VPE         G  ++EE  E+ S
Sbjct: 845 LLVDEMKWDGYVPEI-------DGFLLDEEVDEQDS 873


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 221/679 (32%), Positives = 350/679 (51%), Gaps = 76/679 (11%)

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           ++ F++L   ++ L       E ++        P++  W  M  G A N  +  AL L+ 
Sbjct: 2   LIEFSVLSPHFDGLSYAISIFETIQE-------PNLLIWNTMFRGHALNSDSVTALKLYV 54

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
            M  +G++PN  +    + +C   KAL  G +IH   +K+G+  D+ V  SLI+MY++  
Sbjct: 55  CMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNG 114

Query: 378 ELEAAERVFDM-------------------------------IKDKDVYSWNSMIAGYCQ 406
            LE A +VFD                                I  KDV SWN+MI+GY +
Sbjct: 115 RLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVE 174

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN-----------EDEA------- 448
                +A EL+  M +++V P+  T   ++S   Q+G+           ED         
Sbjct: 175 TCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKI 234

Query: 449 ----VDLFQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
               +DL+ + G+ +          K++  SWN+LI G+  +     AL +F++M  S  
Sbjct: 235 VNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGE 294

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRR--SLESSLPVMNSLIDTYAKSGNIVYS 554
            PN VT+LSVLPACA+L A +  + IH  + +R   + ++  ++ SLID YAK G+I  +
Sbjct: 295 SPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAA 354

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           + +FD M ++ + +WN++I G+ +HG  +AA DLF +M+  G+ P+  TF+ ++ A S +
Sbjct: 355 KQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHS 414

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           GM+DLG+ +F S+++ Y+I P +EHY  MIDL G  G  +EA E I  MP+EPD  IW +
Sbjct: 415 GMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCS 474

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           LL AC++H N++L     + L  +EP +     L+  IYA  G+ +   K+R L  +   
Sbjct: 475 LLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGI 534

Query: 735 RNSFGQCWIEVKNLVYTFVTGGW-----SESYSDLLYSWLQNVPENVTARSSHSGLCIEE 789
           + + G   IE+ ++V+ F+ G        E Y  L    +          +S     +EE
Sbjct: 535 KKAPGCSSIEIDSVVHEFIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEE 594

Query: 790 EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
           E KE     HSEKLA+AF LI S++    + IVKN+R+C +CHE  K +S ++  EI   
Sbjct: 595 EWKEGALRHHSEKLAIAFGLI-STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIAR 653

Query: 850 DSKCLHHFKNGQCSCGDYW 868
           D   LH  K+G  SC DYW
Sbjct: 654 DRTRLHLLKDGVWSCHDYW 672



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 201/443 (45%), Gaps = 81/443 (18%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           L  A  +FE ++E NL  W+ M   ++ +      ++L+  M+  GL P+ + FP +L++
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C        G+ +H  V+KLG      V  S++++Y + G+L  A + F+    +  V++
Sbjct: 75  CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
            ++I+GY   G  + A +LFD++  ++    VV++N +I  Y +      A+E+ K M  
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKD----VVSWNAMISGYVETCNFKEALELYKDMMK 190

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
             + PD  T   ++S  AQ+G                                   ++ +
Sbjct: 191 TNVKPDESTMVTVVSACAQSG-----------------------------------SIEL 215

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G ++HS     GF  ++ + N LI++YSKC E+E A  +F  +  KDV SWN++I G+  
Sbjct: 216 GRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTH 275

Query: 407 AGYCGKAYELFIKMQESDVPPNVIT------------------W---------------- 432
                +A  LF +M  S   PN +T                  W                
Sbjct: 276 MNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNAS 335

Query: 433 ---NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
                LI  Y + G+ + A  +F  M     + R+ +SWN++I G+   G+ N A  +F 
Sbjct: 336 SLLTSLIDMYAKCGDIEAAKQVFDSM-----LTRSLSSWNAMIFGFAMHGKANAAFDLFS 390

Query: 490 KMQSSCFYPNCVTILSVLPACAY 512
           KM+ +   P+ +T + +L AC++
Sbjct: 391 KMRKNGIDPDDITFVGLLSACSH 413



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 210/469 (44%), Gaps = 78/469 (16%)

Query: 63  LLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDA----------- 110
           LL++C  S ++   +++H   L L  ++D++V T L+S+YA+ G L+DA           
Sbjct: 71  LLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRH 130

Query: 111 --------------------REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
                               R++F+++  +++ +W+AMI  Y     ++E +EL+  M++
Sbjct: 131 VVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMK 190

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
             + PD+     ++ AC   G  E G+ +HS +   G     ++ N ++ +Y KCG++  
Sbjct: 191 TNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVET 250

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A   F+ + +KD ++WN++I G+  +    EA  LF +M R       VT   ++ +   
Sbjct: 251 ACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAH 310

Query: 271 LGQCDVA---------------------------------MEMVKRMESLGITPDVFTWT 297
           LG  D+                                  +E  K++    +T  + +W 
Sbjct: 311 LGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWN 370

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HSLAVK 356
            MI GFA +G+ + A DLF +M   G+ P+ +T    +SAC+    L +G  I  S++  
Sbjct: 371 AMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQD 430

Query: 357 MGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAG---YCGK 412
              T  +     +I++   C    EA E +  M  + D   W S++   C+       G+
Sbjct: 431 YKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKA-CKMHNNVELGE 489

Query: 413 AY-ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDK 460
           +Y +  IK++    P N  ++ +L + Y   G  D+   +  R   NDK
Sbjct: 490 SYAQNLIKIE----PENPGSYVLLSNIYATAGRWDQVAKI--RTLLNDK 532



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 158/305 (51%), Gaps = 7/305 (2%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTK 96
             EA+ +   +     K   +T + ++ AC  S SI L R+LH+++ +     ++ +   
Sbjct: 178 FKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNV 237

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+ +Y+KCG ++ A  +F+ + ++++ +W+ +IG ++    ++E + LF  M++ G  P+
Sbjct: 238 LIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPN 297

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKL--GMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           D     +L AC + G  + G+ +H  + K   G++    +  S++ +Y KCG +  A++ 
Sbjct: 298 DVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQV 357

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F+SM  +   +WN+MI G+   G+ + A  LF KM +  I    +TF  L+ + +  G  
Sbjct: 358 FDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGML 417

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
           D+   + + M +   ITP +  + CMI      G   +A ++ + M    + P+GV   S
Sbjct: 418 DLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMP---MEPDGVIWCS 474

Query: 334 AISAC 338
            + AC
Sbjct: 475 LLKAC 479


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 225/746 (30%), Positives = 366/746 (49%), Gaps = 82/746 (10%)

Query: 199 LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV 258
           L  ++  G+L  AR+ F+ +   D  A+N++I  Y  +G    A  L+  M R  +    
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 259 VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF------------------------ 294
            TF  ++++ + L        +     + G+  D+F                        
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160

Query: 295 -------TWTCMISGFAQNGRTSQALDLFKEMS-FVGVMPNGVTITSAISACTDLKALAM 346
                   W  M++G+A +G    A+    +M    G+ PN  T+ S +       AL  
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220

Query: 347 GMEIHSLAVKMGFT---DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           G  IH+  ++       + VL+G +L++MY+KC++L  A RVF  +  ++  +W+++I G
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280

Query: 404 YCQAGYCGKAYELFIKM------------------------------------QESDVPP 427
           +       +A+ LF  M                                     +S +  
Sbjct: 281 FVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHA 340

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           ++   N L+S Y + G  +EA   F  +   D     T S+ +L++G  Q G+   A  V
Sbjct: 341 DLTASNSLLSMYAKAGLINEATMFFDEIAVKD-----TISYGALLSGCVQNGKAEEAFLV 395

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           F+KMQ+    P+  T++S++PAC++L A    K  HG V+ R L     + NSLID YAK
Sbjct: 396 FKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAK 455

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G I  SR +FD M ++D+++WN++I GY +HG    A  LF  MK+ G  P+  TF+ +
Sbjct: 456 CGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICL 515

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           I A S +G+V  GK  F ++T  Y I+P +EHY  M+DL  R G L+EA +FI+ MP++ 
Sbjct: 516 IAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKA 575

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           D  +W ALL ACRIH NIDL       +  L P       L+  I++  G+ ++A +VR 
Sbjct: 576 DVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRI 635

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT--ARSSHSGL 785
           +++    + S G  WIE+   ++ FV G  S   S  +Y  L N+  ++      + +  
Sbjct: 636 IQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSF 695

Query: 786 CIEEEEKEEISGI---HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMH 842
            +++ E+EE       HSEKLA+AF ++ S     TI + KN+R+C  CH   KY++++ 
Sbjct: 696 VLQDLEEEEKEKALLYHSEKLAIAFGVL-SLNEDKTIFVTKNLRVCGDCHTAIKYMTLVR 754

Query: 843 HCEIFLADSKCLHHFKNGQCSCGDYW 868
           +  I + D+   HHFKNGQCSCG++W
Sbjct: 755 NRTIIVRDTNRFHHFKNGQCSCGNFW 780



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 138/551 (25%), Positives = 241/551 (43%), Gaps = 84/551 (15%)

Query: 105 GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKIL 164
           G L  AR+VF+ +   +   ++A+I AYS    +   ++L+  M++  + P+ + FP +L
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
           +AC    D  AG+ +H+     G+     V  +++ +Y++C +   AR  F  M  +D V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 225 AWNSMISGYFQIG---------------------------------------ENDEAHRL 245
           AWN+M++GY   G                                       +    H  
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 246 FDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ 305
             + C E+ +  V+    L+  Y    +C   +   +    + +  DV TW+ +I GF  
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMY---AKCKQLVYACRVFHGMPVRNDV-TWSALIGGFVL 283

Query: 306 NGRTSQALDLFKEMSFVGV-MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
             R ++A +LFK+M   G+   +  ++ SA+  C  L  L MG ++H+L  K G   D+ 
Sbjct: 284 CDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLT 343

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
             NSL++MY+K   +  A   FD I  KD  S+ ++++G  Q G   +A+ +F KMQ  +
Sbjct: 344 ASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACN 403

Query: 425 VPPNVITWNVLIS-----GYIQNGNEDEA-----------------VDLFQRMGKNDKVK 462
           + P++ T   LI        +Q+G                      +D++ + GK D  +
Sbjct: 404 MEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSR 463

Query: 463 --------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY-- 512
                   R+  SWN++IAGY   G    A  +F  M++  F P+ VT + ++ AC++  
Sbjct: 464 QVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSG 523

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNS---LIDTYAKSGNIVYSRTIFDGMSSK-DIIT 568
           LV   K    H           LP M     ++D  A+ G +  +      M  K D+  
Sbjct: 524 LVTEGK----HWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRV 579

Query: 569 WNSLICGYVLH 579
           W +L+    +H
Sbjct: 580 WGALLGACRIH 590



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 202/461 (43%), Gaps = 45/461 (9%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           G  + AI +  S+        + T+  +L+AC     +   R +HA         D+FV 
Sbjct: 79  GPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVS 138

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD--G 152
           T L+ +Y +C     AR VF  M  R++  W+AM+  Y+    +   +    L +QD  G
Sbjct: 139 TALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA-HLLDMQDHGG 197

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR------VRNSVLAVYVKCG 206
           L P+      +L      G    G  +H+  ++   +C+ +      +  ++L +Y KC 
Sbjct: 198 LRPNASTLVSLLPLLAQHGALFQGTSIHAYCLR---ACLEQNEEQVLIGTALLDMYAKCK 254

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI-KLGVVTFNILI 265
           +L++A R F  M  ++ V W+++I G+       EA  LF  M  E +  L   +    +
Sbjct: 255 QLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASAL 314

Query: 266 RSYNQLGQCDVAMEMVKRMESLGI-------------------------------TPDVF 294
           R    L    +  ++   +   GI                                 D  
Sbjct: 315 RVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIAVKDTI 374

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           ++  ++SG  QNG+  +A  +FK+M    + P+  T+ S I AC+ L AL  G   H   
Sbjct: 375 SYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSV 434

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           +  G   +  + NSLI+MY+KC +++ + +VFD +  +DV SWN+MIAGY   G   +A 
Sbjct: 435 IIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEAT 494

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
            LF+ M+     P+ +T+  LI+    +G   E    F  M
Sbjct: 495 TLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTM 535



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 180/415 (43%), Gaps = 48/415 (11%)

Query: 35  NGRLNEAIT-VLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV----TEI 89
           +G  + AI  +LD     G +   +T ++LL       ++     +HA+         E 
Sbjct: 179 HGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEE 238

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
            V + T LL +YAKC  L  A  VF  M  RN  TWSA+IG +    R  E   LF  M+
Sbjct: 239 QVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDML 298

Query: 150 QDGL-FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
            +GL F         L+ C +  D   G  +H+L+ K G+       NS+L++Y K G +
Sbjct: 299 VEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLI 358

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--CREEIKLGVVTF----- 261
             A  FF+ +  KD +++ +++SG  Q G+ +EA  +F KM  C  E  +  +       
Sbjct: 359 NEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPAC 418

Query: 262 ----------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
                                       N LI  Y + G+ D++ ++  +M +     DV
Sbjct: 419 SHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPAR----DV 474

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHS 352
            +W  MI+G+  +G   +A  LF  M   G  P+ VT    I+AC+    +  G     +
Sbjct: 475 VSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDT 534

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           +  K G    +     ++++ ++   L EA + +  M    DV  W +++ G C+
Sbjct: 535 MTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALL-GACR 588



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 168/372 (45%), Gaps = 18/372 (4%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYI-NLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           R+ EA  +   +  +G      T + + L+ C     +H+  +LHA +       D+   
Sbjct: 286 RMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTAS 345

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             LLS+YAK G +++A   F+++  ++  ++ A++    ++ +  E   +F  M    + 
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNME 405

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD      ++ AC +    + GK  H  VI  G++    + NS++ +Y KCGK+  +R+ 
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQV 465

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F+ M  +D V+WN+MI+GY   G   EA  LF  M  +      VTF  LI + +  G  
Sbjct: 466 FDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLV 525

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
                    M    GI P +  + CM+   A+ G   +A    + M     +   V +  
Sbjct: 526 TEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMP----LKADVRVWG 581

Query: 334 A-ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEEL-EAAE-RVFDM 388
           A + AC   K + +G ++  +  K+G       GN ++  N++S      EAAE R+   
Sbjct: 582 ALLGACRIHKNIDLGKQVSRIIQKLGPEG---TGNFVLLSNIFSAAGRFDEAAEVRIIQK 638

Query: 389 I---KDKDVYSW 397
           +   K    YSW
Sbjct: 639 VKGFKKSPGYSW 650



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 113/248 (45%), Gaps = 9/248 (3%)

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           W   +  +I  G    A  +F R+   D       ++N+LI  Y  LG  + A+ ++R M
Sbjct: 37  WQQELEQHISRGQLALARQVFDRIPAPD-----ARAYNALIRAYSWLGPFHAAIDLYRSM 91

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
                 PN  T   VL AC+ LV     + IH       L + L V  +LID Y +    
Sbjct: 92  LRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARF 151

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL-DLFDQMKSFGLKPNRGTFLSIILA 610
             +R +F  M  +D++ WN+++ GY  HG +H A+  L D     GL+PN  T +S++  
Sbjct: 152 GPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPL 211

Query: 611 HSLAGMVDLGKKV--FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
            +  G +  G  +  +C      Q    +   +A++D+Y +  +L  A      MP+  D
Sbjct: 212 LAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRND 271

Query: 669 SSIWEALL 676
            + W AL+
Sbjct: 272 VT-WSALI 278


>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
          Length = 768

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 217/714 (30%), Positives = 354/714 (49%), Gaps = 80/714 (11%)

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           +S YAK   LD AR++F+ M +R + +W+ MI +YS+  R+ E + L + M +  +   +
Sbjct: 79  ISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRSHMKLSE 138

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
             F  +L  C        GKL+H LV+K G      V +++L  Y  C ++  ARR F+ 
Sbjct: 139 STFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEARRVFDV 198

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
           +  ++ V W+ M+ GY      D+A  +F KM R                          
Sbjct: 199 LVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRR------------------------- 233

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGR-TSQALDLFKEMSFVG-VMPNGVTITSAI 335
                         DV  WT +ISGF++NG    +AL++F+ M   G   PN  T    +
Sbjct: 234 --------------DVVAWTTLISGFSKNGDGCGKALEMFRLMMRSGETTPNEFTFDCVV 279

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE------------------ 377
            AC  L  L++G  +H L +K G   D  +G +L+  Y +CE                  
Sbjct: 280 RACGRLGILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLN 339

Query: 378 -------------ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
                         +E AE VF+ + + +  S+N MI GY   G    +  LF KM    
Sbjct: 340 ALNSLIEGLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMP--- 396

Query: 425 VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
               + + N +IS Y +NG  D+A++LF+   KN+K   +  +WNS+I+GY   GQ   A
Sbjct: 397 -CRTIFSSNTMISVYSRNGEIDKALELFEET-KNEK---DPVTWNSMISGYIHSGQPEEA 451

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           L ++  M          T  ++  AC+ L +  + + +H  +++   ES++ V  SLID 
Sbjct: 452 LKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDM 511

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           Y+K G+I+ ++T F  + S ++  W +LI G+  HG    A+ LFD M   GL PN  TF
Sbjct: 512 YSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATF 571

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           + ++ A S AG+V+ G K+F S+  CY + P +EHY+ ++DL GRSG + EA EFI+ MP
Sbjct: 572 VGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMP 631

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
           +E D  +W ALL+AC    ++++     E++F  +P  +    ++  IYA  G+  + + 
Sbjct: 632 LEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWREKMM 691

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA 778
           VRK+ R    +   G  WIE+ N ++ F     S  Y +++Y+ L+++  N+ +
Sbjct: 692 VRKILRGFKVKKDPGCSWIELNNKIHVFSIEDRSHPYCNMIYATLEHLTANINS 745



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 132/498 (26%), Positives = 230/498 (46%), Gaps = 74/498 (14%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACI------DSNSIH----- 74
           +T +     +GR +EA+ ++ S+     K+  +T+ ++L  C       D   IH     
Sbjct: 107 NTMISSYSKHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLK 166

Query: 75  --------LARKLHAFLNLVTEI-------DVFVK------TKLLSVYAKCGCLDDAREV 113
                   +   L  F     EI       DV V+      + +L  Y  C  +DDA  V
Sbjct: 167 SGSESFELVGSALLYFYASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSV 226

Query: 114 FEDMRERNLYTWSAMIGAYSRD-QRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCG 171
           F  M  R++  W+ +I  +S++     + +E+F LM++ G   P++F F  +++ACG  G
Sbjct: 227 FVKMPRRDVVAWTTLISGFSKNGDGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLG 286

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC-------------------------- 205
               G+ +H L++K G+     +  +++  Y +C                          
Sbjct: 287 ILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIE 346

Query: 206 -----GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CREEIKLGVV 259
                G++  A   F  M E + V++N MI GY   G+ D++ RLF+KM CR      + 
Sbjct: 347 GLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRT-----IF 401

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           + N +I  Y++ G+ D A+E+ +  ++     D  TW  MISG+  +G+  +AL L+  M
Sbjct: 402 SSNTMISVYSRNGEIDKALELFEETKN---EKDPVTWNSMISGYIHSGQPEEALKLYITM 458

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
             + +     T ++   AC+ L +L  G  +H+  +K  F  +V VG SLI+MYSKC  +
Sbjct: 459 HRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSI 518

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
             A+  F  I   +V +W ++I G+   G   +A  LF  M E  + PN  T+  ++S  
Sbjct: 519 MEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSAC 578

Query: 440 IQNGNEDEAVDLFQRMGK 457
            + G  +E + +F  M +
Sbjct: 579 SRAGLVNEGMKIFHSMER 596



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/372 (23%), Positives = 162/372 (43%), Gaps = 50/372 (13%)

Query: 5   ILTTFQQLHSLLTK---KSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYI 61
           IL+  + +H LL K   + +P      ++F C    +++A+ V   +         N  +
Sbjct: 287 ILSVGRTVHGLLMKCGLEYDPSIGGALVEFYCECEAIDDALRVCKGVV--------NPCL 338

Query: 62  NLLQACIDSNSIHLARKLHAFL--NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
           N L + I+   I + R   A L  N +TE++      ++  YA  G +DD++ +FE M  
Sbjct: 339 NALNSLIE-GLISMGRIEDAELVFNGMTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPC 397

Query: 120 RNLY--------------------------------TWSAMIGAYSRDQRWREVVELFFL 147
           R ++                                TW++MI  Y    +  E ++L+  
Sbjct: 398 RTIFSSNTMISVYSRNGEIDKALELFEETKNEKDPVTWNSMISGYIHSGQPEEALKLYIT 457

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M +  +      F  +  AC   G  + G+L+H+ +IK        V  S++ +Y KCG 
Sbjct: 458 MHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGS 517

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           ++ A+  F S+   +  AW ++I+G+   G   EA  LFD M  + +     TF  ++ +
Sbjct: 518 IMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGLAPNGATFVGVLSA 577

Query: 268 YNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            ++ G  +  M++   ME    +TP +  + C++    ++G   +A +  K+M       
Sbjct: 578 CSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFIKKMPLEA--- 634

Query: 327 NGVTITSAISAC 338
           +GV   + +SAC
Sbjct: 635 DGVVWGALLSAC 646



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 122/261 (46%), Gaps = 4/261 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           +G+  EA+ +  ++     +  R+T+  L  AC    S+   + LHA L     E +V+V
Sbjct: 445 SGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAHLIKTPFESNVYV 504

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +Y+KCG + +A+  F  +   N+  W+A+I  ++      E + LF  M++ GL
Sbjct: 505 GTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGHAYHGLGSEAISLFDXMIEQGL 564

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            P+   F  +L AC   G    G K+ HS+     ++        V+ +  + G +  A 
Sbjct: 565 APNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAE 624

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
            F + M  E DGV W +++S  +   + +   R+ +KM   + K  + ++ IL   Y  L
Sbjct: 625 EFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPK-PISSYVILSNIYAGL 683

Query: 272 GQCDVAMEMVKRMESLGITPD 292
           G+    M + K +    +  D
Sbjct: 684 GRWREKMMVRKILRGFKVKKD 704



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/381 (21%), Positives = 162/381 (42%), Gaps = 72/381 (18%)

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            +++  N  I+ Y+K  +L+ A ++FD +  + V SWN+MI+ Y + G   +A  L   M
Sbjct: 70  SEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSM 129

Query: 421 QESDVPPNVITWNVLISG----------------YIQNGNED-----EAVDLFQ----RM 455
             S +  +  T++ ++S                  +++G+E       A+  F      +
Sbjct: 130 HRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEI 189

Query: 456 GKNDK-----VKRNTASWNSLIAGYQQLGQKNNALGVFRK-------------------- 490
           G+  +     V+RN   W+ ++ GY      ++AL VF K                    
Sbjct: 190 GEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNG 249

Query: 491 -------------MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
                        M+S    PN  T   V+ AC  L   +  + +HG +++  LE    +
Sbjct: 250 DGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSI 309

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
             +L++ Y +   I  +  +  G+ +  +   NSLI G +  G    A  +F+ M     
Sbjct: 310 GGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEM-- 367

Query: 598 KPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
             N  ++  +I  +++ G +D  K++F  +  C  I       + MI +Y R+G++++A+
Sbjct: 368 --NPVSYNLMIKGYAVGGQMDDSKRLFEKMP-CRTIFS----SNTMISVYSRNGEIDKAL 420

Query: 658 EFIEDMPIEPDSSIWEALLTA 678
           E  E+   E D   W ++++ 
Sbjct: 421 ELFEETKNEKDPVTWNSMISG 441



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 10/166 (6%)

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
            ++KE       +S  S +   N  I  YAK   +  +R +FD M  + +++WN++I  Y
Sbjct: 54  QRLKEFKLYTAHQSNLSEIISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSY 113

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC----SITECYQ 632
             HG +  AL L   M    +K +  TF S++   +    +  GK + C    S +E ++
Sbjct: 114 SKHGRFSEALFLVYSMHRSHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFE 173

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           ++      SA++  Y    ++ EA   + D+ +  +  +W  +L  
Sbjct: 174 LVG-----SALLYFYASCFEIGEARR-VFDVLVRRNEVLWSLMLVG 213


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 227/722 (31%), Positives = 365/722 (50%), Gaps = 80/722 (11%)

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           +S+   +   +N++I+ Y ++G    A  +FDKM +        ++N ++ +Y++ G   
Sbjct: 33  KSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPN----SFSWNTMLSAYSKSGDLS 88

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP-NGVTITSA 334
              E+   M +     D  +W  +ISG+   G   +A+  +  M   GV+  N +T ++ 
Sbjct: 89  TMQEIFSIMPN----RDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTM 144

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD------- 387
           +   +    + +G +IH   VK GF   V VG+SL++MY+K   +  A +VFD       
Sbjct: 145 LLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNV 204

Query: 388 --------------MIKD----------KDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
                         M+KD          +D  SW +MI G  Q G   +A +LF  M++ 
Sbjct: 205 VMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQE 264

Query: 424 DVPPNVITWNVLIS--GYIQNGNEDEAV-DLFQRMGKNDKV------------------- 461
            +  +  T+  +++  G ++   E + +  L  R G N  V                   
Sbjct: 265 GMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYA 324

Query: 462 --------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
                    +N  SW +++ GY Q G    A+ VF  MQ +   P+  T+ SV+ +CA L
Sbjct: 325 EAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANL 384

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
            +  +  + H   L   L S + V N+LI  Y K G+I  S  +FD MS +D ++W +L+
Sbjct: 385 ASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALV 444

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
            GY   G  +  +DLF++M   GLKP+  TF++++ A S AG+V+ G++ F S+ + + I
Sbjct: 445 SGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGI 504

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
           IP  +HY+ MIDL+GR+G+LEEA  FI  MP  PDS  W  LL++CR++GN ++   A E
Sbjct: 505 IPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAE 564

Query: 694 RLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFV 753
            L +L+P +     L+  IYA  GK  +  ++R+  RE   R   G  WI+ K+ VY F 
Sbjct: 565 SLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFS 624

Query: 754 TGGWSESYSDLLYSWLQN-----VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFA 808
               S  +SD +Y+ L+      + E     +S     +E+ EK ++   HSEKLA+AF 
Sbjct: 625 ADDQSSPFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFG 684

Query: 809 LIGSSQAPH--TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGD 866
           L+     PH   IR+VKN+R+C  CH   KY+S +   EI + D+   H FK+G CSCGD
Sbjct: 685 LL---FIPHGLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFHLFKDGTCSCGD 741

Query: 867 YW 868
           +W
Sbjct: 742 FW 743



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 147/586 (25%), Positives = 265/586 (45%), Gaps = 118/586 (20%)

Query: 67  CIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTW 125
           C ++ +   A+KLH  +   +T  + F+   L++ Y+K G +  AR VF+ M + N ++W
Sbjct: 15  CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74

Query: 126 SAMIGAYSRDQRWREVVELFFL-------------------------------MVQDGLF 154
           + M+ AYS+      + E+F +                               M++DG+ 
Sbjct: 75  NTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVL 134

Query: 155 P-DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             +   F  +L    + G  + G+ +H  ++K G      V +S++ +Y K G +  A +
Sbjct: 135 NLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQ 194

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ + E++ V +N+MI+G  + G   ++ RLF  M                        
Sbjct: 195 VFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKER--------------------- 233

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
                             D  +WT MI+G  QNG  ++A+DLF++M   G+  +  T  S
Sbjct: 234 ------------------DSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGS 275

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            ++AC  L+AL  G EIH+L ++ G+  +V VG++L++MY KC  +  AE VF  + +K+
Sbjct: 276 VLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKN 335

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------------------- 432
           V SW +M+ GY Q G+  +A  +F  MQ + + P+  T                      
Sbjct: 336 VVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHC 395

Query: 433 --------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
                         N LI+ Y + G+ +++  LF  M   D+V     SW +L++GY Q 
Sbjct: 396 QALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEV-----SWTALVSGYAQF 450

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           G+ N  + +F +M      P+ VT ++VL AC+      + ++    +L+      +P  
Sbjct: 451 GKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKD--HGIIPFS 508

Query: 539 NS---LIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
           +    +ID + ++G +  ++   + M  S D I W +L+    L+G
Sbjct: 509 DHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYG 554



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 161/314 (51%), Gaps = 5/314 (1%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NL 85
           T +  L  NG   EA+ +   +  +G  + + T+ ++L AC    ++   +++H  +   
Sbjct: 240 TMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRS 299

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
               +VFV + L+ +Y KC  +  A  VF+ M  +N+ +W+AM+  Y ++    E V +F
Sbjct: 300 GYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVF 359

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M ++G+ PDDF    ++ +C N    E G   H   +  G+     V N+++ +Y KC
Sbjct: 360 CDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKC 419

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G +  + + F+ M  +D V+W +++SGY Q G+ +E   LF++M  + +K   VTF  ++
Sbjct: 420 GSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVL 479

Query: 266 RSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
            + ++ G  +   +  + M +  GI P    +TCMI  F + GR  +A +   +M F   
Sbjct: 480 SACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFS-- 537

Query: 325 MPNGVTITSAISAC 338
            P+ +   + +S+C
Sbjct: 538 -PDSIGWATLLSSC 550



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 128/539 (23%), Positives = 233/539 (43%), Gaps = 88/539 (16%)

Query: 6   LTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGA-KVRRNTYINLL 64
           L+T Q++ S++  +    +      ++C  G + EA+   +S+   G   + R T+  +L
Sbjct: 87  LSTMQEIFSIMPNRDGVSWNSLISGYVC-YGSVVEAVKTYNSMMKDGVLNLNRITFSTML 145

Query: 65  QACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLY 123
                   + L R++H   +       VFV + L+ +YAK G +  A +VF++++ERN+ 
Sbjct: 146 LLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVV 205

Query: 124 TWSAMI-----------------GAYSRDQ-RWR-------------EVVELFFLMVQDG 152
            ++ MI                 G   RD   W              E ++LF  M Q+G
Sbjct: 206 MYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEG 265

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           +  D + F  +L ACG     + GK +H+L+I+ G +    V ++++ +Y KC  + +A 
Sbjct: 266 MAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAE 325

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL---------------- 256
             F+ M  K+ V+W +M+ GY Q G ++EA R+F  M R  I+                 
Sbjct: 326 AVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLA 385

Query: 257 ---------------GVVTF----NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                          G+++F    N LI  Y + G  + + ++   M       D  +WT
Sbjct: 386 SLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMS----FRDEVSWT 441

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK- 356
            ++SG+AQ G+ ++ +DLF+ M   G+ P+ VT  + +SAC+    +  G +     +K 
Sbjct: 442 ALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKD 501

Query: 357 ---MGFTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAG---YCQAGY 409
              + F+D       +I+++ +   LE A+   + M    D   W ++++    Y     
Sbjct: 502 HGIIPFSDHY---TCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEI 558

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
              A E  +++     P N   + +L S Y   G       L + M +    K    SW
Sbjct: 559 GKWAAESLLELD----PQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSW 613


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 214/621 (34%), Positives = 333/621 (53%), Gaps = 45/621 (7%)

Query: 292  DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
            +V +W  +I+  A+ G + +AL  F  +  +G++P   +    I +C+ L  L  G   H
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038

Query: 352  SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
              A   GF  D+ V ++LI+MYSKC +L+ A  +FD I  ++V SW SMI GY Q     
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 2098

Query: 412  KAYELFIKMQE--------SDVP-PNVITWNVL--------------ISGYIQNGNEDEA 448
             A  LF    E        ++VP  +V+  +VL              + G++     D +
Sbjct: 2099 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 2158

Query: 449  V-------DLFQRMGK---NDKV-----KRNTASWNSLIAGYQQLGQKNNALGVFRKM-Q 492
            +       D + + G+   + KV     +++  SWNS+IA Y Q G    AL VF  M +
Sbjct: 2159 IGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVR 2218

Query: 493  SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
                  N VT+ +VL ACA+  A    K IH  V++  LE ++ V  S+ID Y K G + 
Sbjct: 2219 HVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVE 2278

Query: 553  YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
             ++  FD M  K++ +W +++ GY +HG    ALD+F +M   G+KPN  TF+S++ A S
Sbjct: 2279 MAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS 2338

Query: 613  LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
             AG+V+ G   F ++   Y I P IEHY  M+DL+GR+G L EA   I+ M ++PD  +W
Sbjct: 2339 HAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVW 2398

Query: 673  EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
             +LL ACRIH N+DL  +A ++LF+L+P +     L+  +YA  G+  D  ++R L +  
Sbjct: 2399 GSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNR 2458

Query: 733  TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----I 787
                  G   +E+K  V+ F+ G     + +++Y +L+ +   +        +      +
Sbjct: 2459 QLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDV 2518

Query: 788  EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIF 847
            +EEEKE I  +HSEKLA+AF ++ S+    TI I+KN+R+C  CH   K +S + H +  
Sbjct: 2519 DEEEKEIILRVHSEKLAVAFGVMNSAPGT-TINIIKNLRVCGDCHTVIKLISKLVHRDFV 2577

Query: 848  LADSKCLHHFKNGQCSCGDYW 868
            + DSK  HHFK+G CSCGDYW
Sbjct: 2578 VRDSKRFHHFKDGVCSCGDYW 2598



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 197/400 (49%), Gaps = 44/400 (11%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           LI  Y+  G+   A+ +  ++++    P  FTW  +I     NG + QAL L+K M   G
Sbjct: 65  LIHLYSTHGRIAYAILLFYQIQN----PCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           +  +  T    I ACT+  ++ +G  +H   +K GF+ DV V N+LI+            
Sbjct: 121 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDF----------- 169

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
                               Y + G+   A ++F KM+      NV++W  +ISG I  G
Sbjct: 170 --------------------YFKCGHTRFALKVFEKMRVR----NVVSWTTVISGLISCG 205

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           +  EA  +F  +       +N  SW ++I GY +  Q   AL +F++MQ+   +PN  T+
Sbjct: 206 DLQEARRIFDEIPS-----KNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTM 260

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
           +S++ AC  +      + IH   ++  +E  + +  +LID Y+K G+I  +  +F+ M  
Sbjct: 261 VSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR 320

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           K + TWNS+I    +HG    AL+LF +M+   +KP+  TF+ ++ A      V  G   
Sbjct: 321 KSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAY 380

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
           F  +T+ Y I P+ EHY  M +LY RS  L+EA +  +++
Sbjct: 381 FTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 200/410 (48%), Gaps = 43/410 (10%)

Query: 50  TQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLD 108
           T    +R    + LLQ C   N  HL R++HA  +      D  +  KL+ +Y+  G + 
Sbjct: 20  TPRGNIRAKKALFLLQNC--KNFKHL-RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIA 76

Query: 109 DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACG 168
            A  +F  ++    +TW+ +I A + +    + + L+  MV  G+  D F FP +++AC 
Sbjct: 77  YAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACT 136

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
           N    + GK++H  +IK G S    V+N+++  Y KCG   +A + FE M  ++ V+W +
Sbjct: 137 NFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTT 196

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
           +ISG    G+  EA R+FD++                                       
Sbjct: 197 VISGLISCGDLQEARRIFDEIP-------------------------------------- 218

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
            + +V +WT MI+G+ +N +  +AL+LFK M    + PN  T+ S I ACT++  L +G 
Sbjct: 219 -SKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGR 277

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
            IH  A+K      V +G +LI+MYSKC  ++ A  VF+ +  K + +WNSMI      G
Sbjct: 278 GIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHG 337

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
              +A  LF +M+  +V P+ IT+  ++   +   N  E    F RM ++
Sbjct: 338 LGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQH 387



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 205/434 (47%), Gaps = 51/434 (11%)

Query: 121  NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
            N+++W+++I   +R     E +  F  + + GL P    FP  +++C    D  +G++ H
Sbjct: 1979 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 2038

Query: 181  SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
                  G      V ++++ +Y KCG+L  AR  F+ +  ++ V+W SMI+GY Q  + D
Sbjct: 2039 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 2098

Query: 241  EAHRLFDKMCREEIKL------------------------------GVVTF--------- 261
             A  LF     EE ++                              GV  F         
Sbjct: 2099 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 2158

Query: 262  ----NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
                N L+ +Y + GQ  V+ ++   ME      D  +W  MI+ +AQ+G + +AL++F 
Sbjct: 2159 IGVGNTLMDAYAKCGQPLVSKKVFDWMEE----KDDISWNSMIAVYAQSGLSGEALEVFH 2214

Query: 318  EM-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
             M   VGV  N VT+++ + AC    AL  G  IH   +KM    +V VG S+I+MY KC
Sbjct: 2215 GMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKC 2274

Query: 377  EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
              +E A++ FD +K+K+V SW +M+AGY   G   +A ++F KM  + V PN IT+  ++
Sbjct: 2275 GRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVL 2334

Query: 437  SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
            +     G  +E    F  M     ++     +  ++  + + G  N A  + ++M+    
Sbjct: 2335 AACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMK---M 2391

Query: 497  YPNCVTILSVLPAC 510
             P+ V   S+L AC
Sbjct: 2392 KPDFVVWGSLLGAC 2405



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 214/466 (45%), Gaps = 84/466 (18%)

Query: 19   KSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARK 78
            KSN    ++ +  L   G   EA+    S+   G    R+++   +++C     +   R 
Sbjct: 1977 KSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRM 2036

Query: 79   LH--AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQ 136
             H  AF+    E D+FV + L+ +Y+KCG L DAR +F+++  RN+ +W++MI  Y +++
Sbjct: 2037 SHQQAFV-FGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNE 2095

Query: 137  RWREVVELF--FL----MVQDG--LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM 188
            +    + LF  FL     V+DG  +  D  +   +L AC         + +H  V+K G 
Sbjct: 2096 QADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGF 2155

Query: 189  SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
                 V N+++  Y KCG+ + +++ F+ M+EKD ++WNSMI+ Y Q G + EA  +F  
Sbjct: 2156 DGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHG 2215

Query: 249  MCRE-EIKLGVVT------------------------------FNI-----LIRSYNQLG 272
            M R   ++   VT                              +N+     +I  Y + G
Sbjct: 2216 MVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCG 2275

Query: 273  QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            + ++A +   RM+      +V +WT M++G+  +GR  +ALD+F +M   GV PN +T  
Sbjct: 2276 RVEMAKKTFDRMKE----KNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFV 2331

Query: 333  SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
            S ++AC+           H+  V+ G+                     A +  +D+  + 
Sbjct: 2332 SVLAACS-----------HAGLVEEGW-----------------HWFNAMKHKYDI--EP 2361

Query: 393  DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
             +  +  M+  + +AG   +AY L  +M+   + P+ + W  L+  
Sbjct: 2362 GIEHYGCMVDLFGRAGCLNEAYNLIKRMK---MKPDFVVWGSLLGA 2404



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 154/342 (45%), Gaps = 42/342 (12%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFV 93
           NG   +A+ +  ++  QG    + T+  +++AC +  SI L + +H + +      DVFV
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162

Query: 94  KTKLLSVYAKCG-----------------------------C--LDDAREVFEDMRERNL 122
           +  L+  Y KCG                             C  L +AR +F+++  +N+
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            +W+AMI  Y R+Q+  E +ELF  M  + +FP+++    +++AC   G    G+ +H  
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
            IK  +     +  +++ +Y KCG +  A   FE+M  K    WNSMI+     G   EA
Sbjct: 283 AIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMIS 301
             LF +M R  +K   +TF  ++ +   +           RM +  GI P    + CM  
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTE 402

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
            +A++    +A   FK    VG + N  +I      C D +A
Sbjct: 403 LYARSNNLDEA---FKSTKEVGSLANSPSI------CFDARA 435



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 166/337 (49%), Gaps = 7/337 (2%)

Query: 61   INLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
            +++L AC   +   +   +H F+     +  + V   L+  YAKCG    +++VF+ M E
Sbjct: 2128 VSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEE 2187

Query: 120  RNLYTWSAMIGAYSRDQRWREVVELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKL 178
            ++  +W++MI  Y++     E +E+F  MV+  G+  +      +L AC + G   AGK 
Sbjct: 2188 KDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKC 2247

Query: 179  MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
            +H  VIK+ +     V  S++ +Y KCG++  A++ F+ M EK+  +W +M++GY   G 
Sbjct: 2248 IHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGR 2307

Query: 239  NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWT 297
              EA  +F KM R  +K   +TF  ++ + +  G  +        M+    I P +  + 
Sbjct: 2308 AKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYG 2367

Query: 298  CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            CM+  F + G  ++A +L K M    + P+ V   S + AC   K + +G EI +  +  
Sbjct: 2368 CMVDLFGRAGCLNEAYNLIKRMK---MKPDFVVWGSLLGACRIHKNVDLG-EIAAQKLFE 2423

Query: 358  GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
               D+      L N+Y+        ER+  ++K++ +
Sbjct: 2424 LDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQL 2460



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 35/251 (13%)

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
           T +WN +I      G    AL +++ M       +  T   V+ AC   ++ +  K +HG
Sbjct: 90  TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYS------------------------------ 554
            +++      + V N+LID Y K G+  ++                              
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209

Query: 555 -RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
            R IFD + SK++++W ++I GY+ +     AL+LF +M++  + PN  T +S+I A + 
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269

Query: 614 AGMVDLGKKVF-CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
            G++ LG+ +   +I  C +I   +   +A+ID+Y + G +++A+E  E MP       W
Sbjct: 270 MGILTLGRGIHDYAIKNCIEIGVYLG--TALIDMYSKCGSIKDAIEVFETMP-RKSLPTW 326

Query: 673 EALLTACRIHG 683
            +++T+  +HG
Sbjct: 327 NSMITSLGVHG 337



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 106/222 (47%), Gaps = 8/222 (3%)

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           +++IH  ++R  L +   +   LI  Y+  G I Y+  +F  + +    TWN +I    +
Sbjct: 43  LRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTI 102

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           +G    AL L+  M   G+  ++ TF  +I A +    +DLGK V  S+ + Y     + 
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK-YGFSGDVF 161

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
             + +ID Y + G    A++  E M +    S W  +++     G++  A     R+FD 
Sbjct: 162 VQNNLIDFYFKCGHTRFALKVFEKMRVRNVVS-WTTVISGLISCGDLQEA----RRIFDE 216

Query: 699 EPG-DVLIQRLILQIYAICGKPEDALKV-RKLERENTRRNSF 738
            P  +V+    ++  Y    +PE+AL++ ++++ EN   N +
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEY 258


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 218/640 (34%), Positives = 332/640 (51%), Gaps = 69/640 (10%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P+  +W  MI G A +     AL+L+  M  +G+ PN  T      +C   KA   G +I
Sbjct: 41  PNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQI 100

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM---------------------- 388
           H+  +K G T D+ V  SLI+MY++   +E A +VFD                       
Sbjct: 101 HAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNM 160

Query: 389 ---------IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
                    I  KDV SWN+MI+GY + G   +A ELF +M + DV P+  T   ++S  
Sbjct: 161 DKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTC 220

Query: 440 IQNGNED----------------------EAVDLFQRMGKNDKVK--------RNTASWN 469
             +GN +                        +DL+ + G+ ++          ++  SWN
Sbjct: 221 THSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWN 280

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           +LI GY  +     AL VF++M      PN VT+LS+LPACA+L A +  + IH  + ++
Sbjct: 281 TLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKK 340

Query: 530 --SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
              + ++  +  SLID YAK GNI  +  +FD + +K + + N++I G+ +HG   AA D
Sbjct: 341 LKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFD 400

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           L  +MK  G++P+  TF+ ++ A S AG+ DLG+K+F S+T  Y+I P +EHY  MIDL 
Sbjct: 401 LLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLL 460

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           GRSG  +EA E I  M +EPD  IW +LL AC+IH N++L  L  ++L  +EP +     
Sbjct: 461 GRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNPGSYV 520

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
           L+  IYA   + +D  +VR L  +   +   G   IE+ ++V+ F+ G      +  +Y 
Sbjct: 521 LLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIGDKFHPQNKEIYK 580

Query: 768 WLQNVPE-----NVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
            L+ +          + +S     +EEE KE     HSEKLA+AF LI S++    +RIV
Sbjct: 581 MLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIAFGLI-STKPGTKLRIV 639

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQC 862
           KN+R+C +CHE  K +S ++  EI   D    HHFK+G C
Sbjct: 640 KNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 236/504 (46%), Gaps = 73/504 (14%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A  VF+ ++E N  +W+ MI  ++        + L+  M+  GL P+ + FP + ++C  
Sbjct: 31  AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
               + GK +H+ ++K G++    V  S++++Y + G +  A + F++   +D V++ +M
Sbjct: 91  SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           I+GY   G  D+A ++FD++  ++    VV++N +I  Y ++G+   A+E+   M  + +
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKD----VVSWNAMISGYAEIGRYKEALELFNEMMKMDV 206

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            PD                                     T+ + +S CT    + +G +
Sbjct: 207 KPD-----------------------------------ESTMATVLSTCTHSGNVELGRQ 231

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           IHS     GF  ++ + N+LI++YSKC E+E A  +F+ ++ KDV SWN++I GY    +
Sbjct: 232 IHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINH 291

Query: 410 CGKAYELFIKMQESDVPPNVIT------------------W-----NVLISGYIQNGN-E 445
             +A  +F +M +    PN +T                  W     +  + G I N + +
Sbjct: 292 HKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQ 351

Query: 446 DEAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
              +D++ + G         +  + ++ +S N++I G+   G+ + A  +  +M+     
Sbjct: 352 TSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIE 411

Query: 498 PNCVTILSVLPACAYLVASNKVKEI-HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
           P+ +T + +L AC++   S+  ++I     L   +E  L     +ID   +SG    +  
Sbjct: 412 PDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEE 471

Query: 557 IFDGMS-SKDIITWNSLICGYVLH 579
           + + M+   D + W SL+    +H
Sbjct: 472 LINSMTMEPDGVIWGSLLKACKIH 495



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 181/363 (49%), Gaps = 12/363 (3%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           GR  EA+ + + +     K   +T   +L  C  S ++ L R++H+++ N     ++ + 
Sbjct: 189 GRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLV 248

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+ +Y+KCG ++ A  +FE ++ +++ +W+ +IG Y+     +E + +F  M++ G  
Sbjct: 249 NALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGET 308

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIK--LGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           P+D     IL AC + G  + G+ +H  + K   G+     ++ S++ +Y KCG +  A 
Sbjct: 309 PNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAAN 368

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + F+++  K   + N+MI G+   G  D A  L  +M ++ I+   +TF  L+ + +  G
Sbjct: 369 QVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAG 428

Query: 273 QCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
             D+  ++ K M     I P +  + CMI    ++G   +A +L   M+   + P+GV  
Sbjct: 429 LSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMT---MEPDGVIW 485

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDMI 389
            S + AC   K L +G  I   A K+   +    G+ ++  N+Y+     +   RV  ++
Sbjct: 486 GSLLKACKIHKNLELGELI---AQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLL 542

Query: 390 KDK 392
            DK
Sbjct: 543 NDK 545



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 98/410 (23%), Positives = 179/410 (43%), Gaps = 67/410 (16%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  L ++C  S +    +++HA  L     +D+ V T L+S+YA+ G ++DA +VF+  
Sbjct: 80  TFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTS 139

Query: 118 RERNL--YT-----------------------------WSAMIGAYSRDQRWREVVELFF 146
             R++  YT                             W+AMI  Y+   R++E +ELF 
Sbjct: 140 SHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFN 199

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M++  + PD+     +L  C + G+ E G+ +HS +   G     ++ N+++ +Y KCG
Sbjct: 200 EMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCG 259

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           ++  A   FE +  KD ++WN++I GY  I  + EA  +F +M +       VT   ++ 
Sbjct: 260 EMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILP 319

Query: 267 SYNQLGQCDVA------------------------MEMVKRMESLGITPDVF-------- 294
           +   LG  D+                         ++M  +  ++     VF        
Sbjct: 320 ACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSL 379

Query: 295 -TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HS 352
            +   MI GFA +GR   A DL   M   G+ P+ +T    +SAC+      +G +I  S
Sbjct: 380 SSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKS 439

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMI 401
           + +       +     +I++  +    + AE + + M  + D   W S++
Sbjct: 440 MTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLL 489


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 225/746 (30%), Positives = 366/746 (49%), Gaps = 82/746 (10%)

Query: 199 LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV 258
           L  ++  G+L  AR+ F+ +   D  A+N++I  Y  +G    A  L+  M R  +    
Sbjct: 41  LEQHISRGQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNK 100

Query: 259 VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF------------------------ 294
            TF  ++++ + L        +     + G+  D+F                        
Sbjct: 101 YTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAK 160

Query: 295 -------TWTCMISGFAQNGRTSQALDLFKEMS-FVGVMPNGVTITSAISACTDLKALAM 346
                   W  M++G+A +G    A+    +M    G+ PN  T+ S +       AL  
Sbjct: 161 MPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQ 220

Query: 347 GMEIHSLAVKMGFT---DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           G  IH+  ++       + VL+G +L++MY+KC++L  A RVF  +  ++  +W+++I G
Sbjct: 221 GTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGG 280

Query: 404 YCQAGYCGKAYELFIKM------------------------------------QESDVPP 427
           +       +A+ LF  M                                     +S +  
Sbjct: 281 FVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHA 340

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           ++   N L+S Y + G  +EA   F  +   D     T S+ +L++G  Q G+   A  V
Sbjct: 341 DLTASNSLLSMYAKAGLINEATMFFDEIAVKD-----TISYGALLSGCVQNGKAEEAFLV 395

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           F+KMQ+    P+  T++S++PAC++L A    K  HG V+ R L     + NSLID YAK
Sbjct: 396 FKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAK 455

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G I  SR +FD M ++D+++WN++I GY +HG    A  LF  MK+ G  P+  TF+ +
Sbjct: 456 CGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICL 515

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           I A S +G+V  GK  F ++T  Y I+P +EHY  M+DL  R G L+EA +FI+ MP++ 
Sbjct: 516 IAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKA 575

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           D  +W ALL ACRIH NIDL       +  L P       L+  I++  G+ ++A +VR 
Sbjct: 576 DVRVWGALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRI 635

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT--ARSSHSGL 785
           +++    + S G  WIE+   ++ FV G  S   S  +Y  L N+  ++      + +  
Sbjct: 636 IQKVKGFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSF 695

Query: 786 CIEEEEKEEISGI---HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMH 842
            +++ E+EE       HSEKLA+AF ++ S     TI + KN+R+C  CH   KY++++ 
Sbjct: 696 VLQDLEEEEKEKALLYHSEKLAIAFGVL-SLNEDKTIFVTKNLRVCGDCHTAIKYMTLVR 754

Query: 843 HCEIFLADSKCLHHFKNGQCSCGDYW 868
           +  I + D+   HHFKNGQCSCG++W
Sbjct: 755 NRTIIVRDTNRFHHFKNGQCSCGNFW 780



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 138/551 (25%), Positives = 241/551 (43%), Gaps = 84/551 (15%)

Query: 105 GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKIL 164
           G L  AR+VF+ +   +   ++A+I AYS    +   ++L+  M++  + P+ + FP +L
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
           +AC    D  AG+ +H+     G+     V  +++ +Y++C +   AR  F  M  +D V
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVV 167

Query: 225 AWNSMISGYFQIG---------------------------------------ENDEAHRL 245
           AWN+M++GY   G                                       +    H  
Sbjct: 168 AWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAY 227

Query: 246 FDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ 305
             + C E+ +  V+    L+  Y    +C   +   +    + +  DV TW+ +I GF  
Sbjct: 228 CLRACLEQNEEQVLIGTALLDMY---AKCKQLVYACRVFHGMPVRNDV-TWSALIGGFVL 283

Query: 306 NGRTSQALDLFKEMSFVGV-MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
             R ++A +LFK+M   G+   +  ++ SA+  C  L  L MG ++H+L  K G   D+ 
Sbjct: 284 CDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLT 343

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
             NSL++MY+K   +  A   FD I  KD  S+ ++++G  Q G   +A+ +F KMQ  +
Sbjct: 344 ASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACN 403

Query: 425 VPPNVITWNVLIS-----GYIQNGNEDEA-----------------VDLFQRMGKNDKVK 462
           + P++ T   LI        +Q+G                      +D++ + GK D  +
Sbjct: 404 MEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSR 463

Query: 463 --------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY-- 512
                   R+  SWN++IAGY   G    A  +F  M++  F P+ VT + ++ AC++  
Sbjct: 464 QVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSG 523

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNS---LIDTYAKSGNIVYSRTIFDGMSSK-DIIT 568
           LV   K    H           LP M     ++D  A+ G +  +      M  K D+  
Sbjct: 524 LVTEGK----HWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRV 579

Query: 569 WNSLICGYVLH 579
           W +L+    +H
Sbjct: 580 WGALLGACRIH 590



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 182/406 (44%), Gaps = 44/406 (10%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D+FV T L+ +Y +C     AR VF  M  R++  W+AM+  Y+    +   +    L +
Sbjct: 134 DLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIA-HLLDM 192

Query: 150 QD--GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR------VRNSVLAV 201
           QD  GL P+      +L      G    G  +H+  ++   +C+ +      +  ++L +
Sbjct: 193 QDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLR---ACLEQNEEQVLIGTALLDM 249

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI-KLGVVT 260
           Y KC +L++A R F  M  ++ V W+++I G+       EA  LF  M  E +  L   +
Sbjct: 250 YAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATS 309

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGI------------------------------- 289
               +R    L    +  ++   +   GI                               
Sbjct: 310 VASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLINEATMFFDEIA 369

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             D  ++  ++SG  QNG+  +A  +FK+M    + P+  T+ S I AC+ L AL  G  
Sbjct: 370 VKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKC 429

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
            H   +  G   +  + NSLI+MY+KC +++ + +VFD +  +DV SWN+MIAGY   G 
Sbjct: 430 SHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGL 489

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
             +A  LF+ M+     P+ +T+  LI+    +G   E    F  M
Sbjct: 490 GKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTM 535



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 152/346 (43%), Gaps = 45/346 (13%)

Query: 35  NGRLNEAIT-VLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV----TEI 89
           +G  + AI  +LD     G +   +T ++LL       ++     +HA+         E 
Sbjct: 179 HGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNEE 238

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
            V + T LL +YAKC  L  A  VF  M  RN  TWSA+IG +    R  E   LF  M+
Sbjct: 239 QVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKDML 298

Query: 150 QDGL-FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
            +GL F         L+ C +  D   G  +H+L+ K G+       NS+L++Y K G +
Sbjct: 299 VEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAGLI 358

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--CREEIKLGVVTF----- 261
             A  FF+ +  KD +++ +++SG  Q G+ +EA  +F KM  C  E  +  +       
Sbjct: 359 NEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPAC 418

Query: 262 ----------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
                                       N LI  Y + G+ D++ ++  +M +     DV
Sbjct: 419 SHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPAR----DV 474

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
            +W  MI+G+  +G   +A  LF  M   G  P+ VT    I+AC+
Sbjct: 475 VSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACS 520



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 168/374 (44%), Gaps = 22/374 (5%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYI-NLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVK 94
           R+ EA  +   +  +G      T + + L+ C     +H+  +LHA +       D+   
Sbjct: 286 RMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTAS 345

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             LLS+YAK G +++A   F+++  ++  ++ A++    ++ +  E   +F  M    + 
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNME 405

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD      ++ AC +    + GK  H  VI  G++    + NS++ +Y KCGK+  +R+ 
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQV 465

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F+ M  +D V+WN+MI+GY   G   EA  LF  M  +      VTF  LI + +  G  
Sbjct: 466 FDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLV 525

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT- 332
                    M    GI P +  + CM+   A+ G   +A        F+  MP    +  
Sbjct: 526 TEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEA------YQFIQSMPLKADVRV 579

Query: 333 --SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEEL-EAAE-RVF 386
             + + AC   K + +G ++  +  K+G       GN ++  N++S      EAAE R+ 
Sbjct: 580 WGALLGACRIHKNIDLGKQVSRIIQKLGPEG---TGNFVLLSNIFSAAGRFDEAAEVRII 636

Query: 387 DMI---KDKDVYSW 397
             +   K    YSW
Sbjct: 637 QKVKGFKKSPGYSW 650



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 113/248 (45%), Gaps = 9/248 (3%)

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           W   +  +I  G    A  +F R+   D       ++N+LI  Y  LG  + A+ ++R M
Sbjct: 37  WQQELEQHISRGQLALARQVFDRIPAPD-----ARAYNALIRAYSWLGPFHAAIDLYRSM 91

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
                 PN  T   VL AC+ LV     + IH       L + L V  +LID Y +    
Sbjct: 92  LRFRVAPNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARF 151

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL-DLFDQMKSFGLKPNRGTFLSIILA 610
             +R +F  M  +D++ WN+++ GY  HG +H A+  L D     GL+PN  T +S++  
Sbjct: 152 GPARNVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPL 211

Query: 611 HSLAGMVDLGKKV--FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
            +  G +  G  +  +C      Q    +   +A++D+Y +  +L  A      MP+  D
Sbjct: 212 LAQHGALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRND 271

Query: 669 SSIWEALL 676
            + W AL+
Sbjct: 272 VT-WSALI 278


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 206/618 (33%), Positives = 334/618 (54%), Gaps = 30/618 (4%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+R Y   G+  +A  +   +       +V  +  MI  +  N     AL ++K M   G
Sbjct: 60  LMRVYAACGEPGLARHIFDEITD----KNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQG 115

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
            +P+  T    + A +   +L +G++IH   +K+G   ++ VGN LI MY KC+ L+ A+
Sbjct: 116 FVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQ 175

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
           +V D I  +DV SWNSM++ Y Q G    A EL  +M+  ++ PN  T   L+   + N 
Sbjct: 176 QVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPA-VTNT 234

Query: 444 NEDEAV---DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
             D  +   ++F ++      K++  SWN +IA Y        A+ ++ +M+++   P+ 
Sbjct: 235 TSDNVLYVKEMFLKL-----TKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDV 289

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           V+I+SVLPA   L A +  + +H    R+ L  +L + N+LID YAK G +  +R +F+ 
Sbjct: 290 VSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQ 349

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           M  +D+++W S+I  Y   G    A+ +F +M++ GL P+   F+S++ A S AG++D G
Sbjct: 350 MQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDG 409

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
           +  F  + EC  I P +EH++ ++DL GR+GK++EA  FI  MP+EPD  +W  LL+ACR
Sbjct: 410 RYYFNLMAEC-GITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACR 468

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           ++ N+++ +LA ++L  L P       L+  IYA  G+  D   +R +      +   G 
Sbjct: 469 VYSNMNIGILAADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGI 528

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQ----------NVPENVTARSSHSGLCIEEE 790
             +E+ + V+TF+ G  S   S  +Y  L            +PE  +A        +EEE
Sbjct: 529 SNVELNDGVHTFLAGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHD-----VEEE 583

Query: 791 EKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLAD 850
           +KE    +HSEKLA+AFA+I +      IR+ KN+R+C  CH  AK +S +   EI + D
Sbjct: 584 DKEYHLAVHSEKLAVAFAIINTKPGT-PIRVTKNLRVCGDCHVAAKLISKIAEREIIIRD 642

Query: 851 SKCLHHFKNGQCSCGDYW 868
           +   HHF+ G CSCGDYW
Sbjct: 643 THRFHHFQEGCCSCGDYW 660



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 201/399 (50%), Gaps = 3/399 (0%)

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V  KL+ VYA CG    AR +F+++ ++N+  ++ MI +Y  +  +++ + ++  M   G
Sbjct: 56  VGIKLMRVYAACGEPGLARHIFDEITDKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQG 115

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             PD + +P +L+A         G  +H  V+K+G+     V N ++A+Y KC  L  A+
Sbjct: 116 FVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQ 175

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           +  + +  +D V+WNSM+S Y Q G  ++A  L  +M    +K    T   L+ +     
Sbjct: 176 QVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTNTT 235

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
             +V    VK M        V +W  MI+ +  N    +A+ L+ +M   GV P+ V+I 
Sbjct: 236 SDNVL--YVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIV 293

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           S + A  DL AL++G  +H  A +     ++L+ N+LI+MY+KC  L  A  VF+ ++ +
Sbjct: 294 SVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFR 353

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLF 452
           DV SW S+I+ Y + G    A  +F +M+ S + P+ I +  +++     G  D+    F
Sbjct: 354 DVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYF 413

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
             M +   +      +  ++    + G+ + A G  R+M
Sbjct: 414 NLMAECG-ITPKLEHFACVVDLLGRAGKIDEAYGFIRQM 451



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 86/375 (22%), Positives = 177/375 (47%), Gaps = 12/375 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFV 93
           N    +A+ V  ++ TQG      TY  +L+A   S+S+ +  ++H A L +  +++++V
Sbjct: 98  NHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYV 157

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+++Y KC  L +A++V +++  R++ +W++M+  Y+++ R+ + +EL   M    L
Sbjct: 158 GNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNL 217

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+D     +L A  N    +    +  + +KL    V    N ++A+YV       A  
Sbjct: 218 KPNDCTMASLLPAVTNTTS-DNVLYVKEMFLKLTKKSVIS-WNVMIAMYVNNSMPKEAVV 275

Query: 214 FFESMD----EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            +  M+    E D V+  S++  Y  +       R+     R+++   ++  N LI  Y 
Sbjct: 276 LYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYA 335

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           + G    A  +  +M+      DV +WT +IS + + G+   A+ +F EM   G+ P+ +
Sbjct: 336 KCGCLRDARAVFNQMQ----FRDVVSWTSIISAYGKCGQGRDAVAVFAEMRNSGLNPDSI 391

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDM 388
              S ++AC+    L  G    +L  + G T  +     ++++  +  ++ EA   +  M
Sbjct: 392 AFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDEAYGFIRQM 451

Query: 389 IKDKDVYSWNSMIAG 403
             + D   W  +++ 
Sbjct: 452 PLEPDERVWGPLLSA 466



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 3/219 (1%)

Query: 16  LTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHL 75
           LTKKS   + +  +     N    EA+ +   +   G +    + +++L A  D +++ L
Sbjct: 249 LTKKSVISW-NVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSL 307

Query: 76  ARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
            R++H F      + ++ ++  L+ +YAKCGCL DAR VF  M+ R++ +W+++I AY +
Sbjct: 308 GRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGK 367

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
             + R+ V +F  M   GL PD   F  +L AC + G  + G+   +L+ + G++     
Sbjct: 368 CGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEH 427

Query: 195 RNSVLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISG 232
              V+ +  + GK+  A  F   M  E D   W  ++S 
Sbjct: 428 FACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSA 466


>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Glycine max]
          Length = 696

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 214/693 (30%), Positives = 353/693 (50%), Gaps = 79/693 (11%)

Query: 72  SIHLARKLHAFLNLVTEIDV-FVKTKLLSVYAKCGCLDDAREVFEDMRERNLY---TWSA 127
           ++  AR+LH+ L L T   + F+  +L++VYA+   L  AR+VF+ +   +L+    W++
Sbjct: 43  TLQQARQLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIPLESLHHLLLWNS 102

Query: 128 MIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
           +I A       +  +EL+  M + G  PD F  P +++AC + G     +++H   +++G
Sbjct: 103 IIRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMG 162

Query: 188 MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
                 V N ++ +Y K G++                               ++A +LFD
Sbjct: 163 FRNHLHVVNELVGMYGKLGRM-------------------------------EDARQLFD 191

Query: 248 KMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
            M    I    V++N ++  Y        A  + KRME  G+ P+  TWT ++S  A+ G
Sbjct: 192 GMFVRSI----VSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCG 247

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
              + L+LFK M   G+      +   +S C D+  +  G EIH   VK G+ D + V N
Sbjct: 248 LYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKN 307

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           +LI  Y K + +                               G A+++F++++      
Sbjct: 308 ALIGTYGKHQHM-------------------------------GDAHKVFLEIKN----K 332

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDK-----VKRNTASWNSLIAGYQQLGQKN 482
           N+++WN LIS Y ++G  DEA   F  M K+D      V+ N  SW+++I+G+   G+  
Sbjct: 333 NLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGE 392

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
            +L +FR+MQ +    NCVTI SVL  CA L A N  +E+HG  +R  +  ++ V N LI
Sbjct: 393 KSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLI 452

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
           + Y K G+      +FD +  +D+I+WNSLI GY +HG    AL  F++M    +KP+  
Sbjct: 453 NMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNI 512

Query: 603 TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           TF++I+ A S AG+V  G+ +F  +   ++I P +EHY+ M+DL GR+G L+EA + + +
Sbjct: 513 TFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVRN 572

Query: 663 MPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDA 722
           MPIEP+  +W ALL +CR++ ++D+      ++  L+        L+  IYA  G+ +D+
Sbjct: 573 MPIEPNEYVWGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLLSNIYAANGRWDDS 632

Query: 723 LKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
            +VR   R    +   GQ WIEV+  VYTF  G
Sbjct: 633 ARVRVSARTKGLKKIPGQSWIEVRKKVYTFSAG 665



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/395 (21%), Positives = 165/395 (41%), Gaps = 51/395 (12%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFVK 94
           G  +E + +   + T+G ++       +L  C D   +   +++H ++      D +FVK
Sbjct: 247 GLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVK 306

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQ------------------ 136
             L+  Y K   + DA +VF +++ +NL +W+A+I +Y+                     
Sbjct: 307 NALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSD 366

Query: 137 ----------RWREVV-------------ELFFLMVQDGLFPDDFLFPKILQACGNCGDF 173
                      W  V+             ELF  M    +  +      +L  C      
Sbjct: 367 DHSLVRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAAL 426

Query: 174 EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
             G+ +H   I+  MS    V N ++ +Y+KCG        F++++ +D ++WNS+I GY
Sbjct: 427 NLGRELHGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGY 486

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPD 292
              G  + A R F++M R  +K   +TF  ++ + +  G       +  +M +   I P+
Sbjct: 487 GMHGLGENALRTFNEMIRARMKPDNITFVAILSACSHAGLVAAGRNLFDQMVTEFRIEPN 546

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           V  + CM+    + G   +A D+ + M    + PN     + +++C   K + +  E  S
Sbjct: 547 VEHYACMVDLLGRAGLLKEATDIVRNMP---IEPNEYVWGALLNSCRMYKDMDIVEETAS 603

Query: 353 --LAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
             L +K   T   ++   L N+Y+     + + RV
Sbjct: 604 QILTLKSKITGSFML---LSNIYAANGRWDDSARV 635


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 241/792 (30%), Positives = 394/792 (49%), Gaps = 96/792 (12%)

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD--E 220
           +L+ C    +   GKL+H  +    +     + NS++ +Y K    I A   F+SM+  +
Sbjct: 58  LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKMCREE---------------------IKLGVV 259
           +D V+++S+IS +       +A  +FD++  ++                      K G+ 
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLC 177

Query: 260 TFNILIR-----SYNQLG---------QCDVA-MEMVKRMESLGITPDVFTWTCMISGFA 304
            F  +++     S+  +G          C +A +E  +++       +V TWT MI+  A
Sbjct: 178 LFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLA 237

Query: 305 QNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
           Q G   +A+DLF EM    G +P+  T+T  IS C +++ L++G E+HS  ++ G   D+
Sbjct: 238 QYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDL 297

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG--YCGKAYELFIKMQ 421
            VG SL++MY+KC  ++ A +VFD +++ +V SW +++ GY + G  Y  +A  +F  M 
Sbjct: 298 CVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNML 357

Query: 422 -ESDVPPNVITW-----------------------------------NVLISGYIQNGNE 445
            +  V PN  T+                                   N L+S Y ++G  
Sbjct: 358 LQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRM 417

Query: 446 DEAVD----LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
           + A      LF++   ++ V  +T   +  +   Q L ++   +G       S F     
Sbjct: 418 ESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVG----SGVSSF----- 468

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           T  S+L   A +    K ++IH  V++    + L V N+LI  Y+K GN   +  +F+ M
Sbjct: 469 TYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDM 528

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
              ++ITW S+I G+  HGF   AL+LF  M   G+KPN  T+++++ A S  G++D   
Sbjct: 529 EDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAW 588

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
           K F S+ + + I+P +EHY+ M+DL GRSG L EA+EFI  MP + D+ +W   L +CR+
Sbjct: 589 KHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRV 648

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H N  L   A + + + EP D     L+  +YA  G+ ED   +RK  ++       G  
Sbjct: 649 HRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSS 708

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP---ENVTARSSHSGLC--IEEEEKEEIS 796
           WIEV+N V+ F  G      +  +Y  L  +    +NV    +   +   +E+E+KE+  
Sbjct: 709 WIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVEDEQKEQYL 768

Query: 797 GIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHH 856
             HSEKLA+AFALI S+  P  IR+ KN+R+C  CH   KY+SM+   EI + D+   HH
Sbjct: 769 FQHSEKLAVAFALI-STPNPKPIRVFKNLRVCGDCHTAIKYISMVSGREIVVRDANRFHH 827

Query: 857 FKNGQCSCGDYW 868
            K+G CSC DYW
Sbjct: 828 MKDGTCSCNDYW 839



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 153/633 (24%), Positives = 290/633 (45%), Gaps = 104/633 (16%)

Query: 37  RLNEAITVL---DSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVF 92
           +L++AIT L   D+ +T   K+  ++   LL+ CI + + HL + LH  L      +D  
Sbjct: 31  QLHKAITTLNLTDTESTHNNKLITSSL--LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTL 88

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMR--ERNLYTWSAMIGAYSRDQRWREVVELF-FLMV 149
           +   L+++Y+K      A  +F+ M   +R++ ++S++I  ++ ++   + VE+F  L++
Sbjct: 89  LLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLL 148

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRRVRNSVLAVYVK---C 205
           QDG++P+++ F  +++AC   G F+ G  +   V+K G       V   ++ ++VK    
Sbjct: 149 QDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSL 208

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---------------- 249
             L  AR+ F+ M EK+ V W  MI+   Q G NDEA  LF +M                
Sbjct: 209 ADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGL 268

Query: 250 ---CRE--EIKLGVVTFNILIRS------------YNQLGQCDVAMEMVKRMESLGITPD 292
              C E   + LG    + +IRS             +   +C +  E  K  + +    +
Sbjct: 269 ISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMR-EHN 327

Query: 293 VFTWTCMISGFAQNG--RTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGME 349
           V +WT +++G+ + G     +A+ +F  M   G V PN  T +  + AC  L     G +
Sbjct: 328 VMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQ 387

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV--------------- 394
           +H   +K+G +    VGN L+++Y+K   +E+A + FD++ +K++               
Sbjct: 388 VHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFN 447

Query: 395 --------------------YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
                               +++ S+++G    G  GK  ++   + +     ++   N 
Sbjct: 448 LNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNA 507

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           LIS Y + GN++ A+ +F     ND    N  +W S+I G+ + G  + AL +F  M  +
Sbjct: 508 LISMYSKCGNKEAALQVF-----NDMEDCNVITWTSIINGFAKHGFASKALELFYNMLET 562

Query: 495 CFYPNCVTILSVLPACAYLVASNK-------VKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
              PN VT ++VL AC+++   ++       +++ HG V R      +     ++D   +
Sbjct: 563 GVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPR------MEHYACMVDLLGR 616

Query: 548 SGNIVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
           SG +  +    + M    D + W + +    +H
Sbjct: 617 SGLLSEAIEFINSMPFDADALVWRTFLGSCRVH 649


>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 815

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 219/762 (28%), Positives = 367/762 (48%), Gaps = 81/762 (10%)

Query: 64  LQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           LQ C    ++   ++LHA  L      D F+   LL++Y KCG L DAR VF+ M  R++
Sbjct: 57  LQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDI 116

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
             W+AMI A++      + +++F  M Q+G+ P+ F    +L+AC      +    +H  
Sbjct: 117 VAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQ 176

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           V+KL       V +S++  Y  CG+L  A      + E+  V+WN++++GY + G+    
Sbjct: 177 VVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRV 236

Query: 243 HRLFDKM------------------CRE-------------EIKLGVVTFNIL----IRS 267
             + +K+                  C E              IK G+ T N+L    +  
Sbjct: 237 MIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEM 296

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           Y++    + A E+  R++     PDV   + MIS F ++    +ALDLF +MS +GV PN
Sbjct: 297 YSRCLSAEEAYEVFIRIDE----PDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPN 352

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
                      +      +   +H+  VK GF     VG++++NMY K   ++ A   FD
Sbjct: 353 HYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFD 412

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------------- 432
           +I + D +SWN++++ +     C +   +F +M       N  T+               
Sbjct: 413 LIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRF 472

Query: 433 --------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                                +L+  Y Q+G    A  +F+++ +     R+  SW  ++
Sbjct: 473 GTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKE-----RDAFSWTVIM 527

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
           +GY +  +    +  FR M      P+  T+   L  C+ + +     ++H   ++    
Sbjct: 528 SGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWN 587

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
           SS+ V  +L+D Y K GNI  +  +F    ++D + WN++ICGY  HG  + ALD F QM
Sbjct: 588 SSV-VSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQM 646

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
              G +P+  TF+ ++ A S AG+++ G+K F S++  Y I P +EHY+ M+D+  ++G+
Sbjct: 647 VDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGR 706

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQI 712
           L EA   I  MP+ PDSSIW  +L ACRIH NI++A  A ERLF+LEP D     L+  I
Sbjct: 707 LVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPHDASSSILLSNI 766

Query: 713 YAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           YA  G+  D  +VR +  ++  +   G  WIE+   ++ F++
Sbjct: 767 YADLGRWSDVTRVRNILLDHGVKKEPGCSWIEINGQIHMFLS 808



 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 116/508 (22%), Positives = 235/508 (46%), Gaps = 36/508 (7%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           +G     + +++ +   G ++ + T   +L+ C++       + +HA  +    E D  +
Sbjct: 230 HGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVL 289

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +Y++C   ++A EVF  + E ++   SAMI  + R     E ++LF  M   G+
Sbjct: 290 NSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGV 349

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+ ++F  I       GD    + +H+ ++K G + ++ V +++L +YVK G +  A  
Sbjct: 350 KPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATV 409

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL-- 271
            F+ + E D  +WN+++S ++     ++  R+F +M  E       T+  ++R    L  
Sbjct: 410 TFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMN 469

Query: 272 -----------------GQCDVAMEMVKRMESLGI------------TPDVFTWTCMISG 302
                               DV+  +V      G               D F+WT ++SG
Sbjct: 470 LRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSG 529

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           +A+     + ++ F+ M    + P+  T+  ++S C+D+ +L  G+++HS A+K G+   
Sbjct: 530 YAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKSGWNSS 589

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V+ G +L++MY KC  +  AE +F   + +D  +WN++I GY Q G+  KA + F +M +
Sbjct: 590 VVSG-ALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYKALDAFKQMVD 648

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
               P+ IT+  ++S     G  +E    F+ +     +      +  ++    + G+  
Sbjct: 649 EGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYACMVDILSKAGRLV 708

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPAC 510
            A  +  +M      P+     ++L AC
Sbjct: 709 EAESLINQMP---LAPDSSIWRTILGAC 733



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 179/378 (47%), Gaps = 34/378 (8%)

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
            +A+  C   + L  G E+H+  ++     D  + +SL+NMY KC  L  A RVFD +  
Sbjct: 54  AAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPH 113

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI---SGYIQ------- 441
           +D+ +W +MI+ +  AG   +A ++F +M +  + PN  T   ++   SG          
Sbjct: 114 RDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQV 173

Query: 442 -------NGNED-----EAVDLFQRMGKNDKV--------KRNTASWNSLIAGYQQLGQK 481
                  NG +D       V+ +   G+ D          +R+  SWN+L+ GY + G  
Sbjct: 174 HGQVVKLNGLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDY 233

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
              + +  K+ +S    +  T+ +VL  C  L  +   + +H  V++R LE+   + + L
Sbjct: 234 RRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCL 293

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
           ++ Y++  +   +  +F  +   D++  +++I  +  H     ALDLF +M   G+KPN 
Sbjct: 294 VEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNH 353

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
             F+ I    S  G  +L + V   I +  + ++  +    A++++Y + G +++A    
Sbjct: 354 YIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVG--DAILNMYVKVGAVQDATVTF 411

Query: 661 EDMPIEPDSSIWEALLTA 678
            D+  EPD+  W  +L+A
Sbjct: 412 -DLIHEPDTFSWNTILSA 428



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 115/247 (46%), Gaps = 11/247 (4%)

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           + L  CA      + +E+H  +LR +L     +++SL++ Y K G +V +R +FDGM  +
Sbjct: 55  AALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHR 114

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           DI+ W ++I  +   G    ALD+F +M   G+ PN  T  S++ A S         +V 
Sbjct: 115 DIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVH 174

Query: 625 CSITECYQI-IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
             + +   +  P +   S++++ Y   G+L+ A   +  +P   D S W ALL     HG
Sbjct: 175 GQVVKLNGLDDPYVG--SSLVEAYTSCGELDAAETVLLGLPERSDVS-WNALLNGYARHG 231

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC-----GKPEDALKVRKLERENTRRNSF 738
           +    ++ IE+L  +  GD + +  +  +   C      K   ++    ++R     N  
Sbjct: 232 DYRRVMIIIEKL--VASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVL 289

Query: 739 GQCWIEV 745
             C +E+
Sbjct: 290 NSCLVEM 296


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  349 bits (896), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 237/785 (30%), Positives = 390/785 (49%), Gaps = 80/785 (10%)

Query: 61  INLLQACIDSNSIHLARKLHAFL----NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           + LL+ C+ +  + L  ++HA       L     + + T+LL +Y       DA  VF  
Sbjct: 36  LALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSA 95

Query: 117 MRER---NLYTWSAMIGAYSRDQRWREVVELFFLMV---QDGLFPDDFLFPKILQACGNC 170
           +      +   W+ +I  ++       +  LF++ +        PD    P ++++C   
Sbjct: 96  LPRAAAGSSLPWNWLIRGFTAAGH-HSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAAL 154

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
           G    G+L+H      G++    V ++++ +Y   G L  AR  F+ M  +D V WN M+
Sbjct: 155 GAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMM 214

Query: 231 SGYFQIGENDEAHRLFDKM------------------CREE-------------IKLG-- 257
            GY + G+   A RLF  M                  C  E             +K G  
Sbjct: 215 DGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLE 274

Query: 258 --VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             V   N L+  Y +    D A     R+  L    D+ TW  MISG  QNG   +AL L
Sbjct: 275 QEVAVANTLLSMYAKCRCLDDAW----RLFELLPRDDLVTWNGMISGCVQNGLLDEALGL 330

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           F +M   G  P+ VT+ S + A TDL  L  G E+H   ++     D  + ++L+++Y K
Sbjct: 331 FCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFK 390

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT-WNV 434
           C ++  A  ++D  +  DV   +++I+GY   G   KA ++F  + E  + PN +T  +V
Sbjct: 391 CRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASV 450

Query: 435 L--------------ISGYI-QNGNEDEA------VDLFQRMGKNDKVK--------RNT 465
           L              I GY+ +N  E +       +D++ + G+ D           ++ 
Sbjct: 451 LPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDE 510

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
            +WNS+I+ + Q G+   AL +FR+M       N VTI S L ACA L A    KEIHG 
Sbjct: 511 VTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGV 570

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
           +++  +++ +   ++LID YAK GN+  +  +F+ M  K+ ++WNS+I  Y  HG    +
Sbjct: 571 IIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVKES 630

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           +    +M+  G KP+  TFL++I A + AG+V+ G ++F  +T+ Y I P +EH++ M+D
Sbjct: 631 VSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVD 690

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           LY RSG+L++A++FI DMP +PD+ IW ALL ACR+H N++LA +A + LF L+PG+   
Sbjct: 691 LYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGNSGY 750

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
             L+  I A+ G+ +   KVR+L ++N      G  W++V N  + FV    S   S+ +
Sbjct: 751 YVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFVASDKSHPESEDI 810

Query: 766 YSWLQ 770
           Y+ L+
Sbjct: 811 YTSLK 815



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/413 (23%), Positives = 182/413 (44%), Gaps = 58/413 (14%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVF 92
           NG L+EA+ +   +   GA+    T ++LL A  D N +   +++H ++  N V  +D F
Sbjct: 321 NGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCV-HMDAF 379

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           + + L+ +Y KC  +  AR +++  R  ++   S +I  Y  +    + +++F  +++  
Sbjct: 380 LVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQC 439

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P+      +L AC +      G+ +H  V++        V ++++ +Y KCG+L  + 
Sbjct: 440 IKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSH 499

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------- 261
             F  M  KD V WNSMIS + Q GE  EA  LF +MC E IK   VT            
Sbjct: 500 YIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLP 559

Query: 262 ------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDV--FT 295
                                   + LI  Y + G  ++A+ + + M      PD    +
Sbjct: 560 AIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFM------PDKNEVS 613

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  +IS +  +G   +++     M   G  P+ VT  + ISAC     +  G+++     
Sbjct: 614 WNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQC-- 671

Query: 356 KMGFTDDVLVGNS------LINMYSKCEELEAA-ERVFDMIKDKDVYSWNSMI 401
               T + L+         ++++YS+   L+ A + + DM    D   W +++
Sbjct: 672 ---MTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALL 721


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  349 bits (896), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 232/789 (29%), Positives = 381/789 (48%), Gaps = 96/789 (12%)

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM--DE 220
           +L+AC   G+ E GKL+H  +I  G+     + NS++ +Y KCG    A   F +M   +
Sbjct: 45  LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKM--CREEI---------------------KLG 257
           +D V+W+++IS +        A   F  M  C   I                       G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT-------------PDVFTWTCMISGFA 304
           +  F  L+++        V   ++      G+               ++ TWT MI+ ++
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           Q G    A+DLF  +      P+  T+TS +SAC +L+  ++G ++HS  ++ G   DV 
Sbjct: 225 QLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVF 284

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
           VG +L++MY+K   +E + ++F+ +   +V SW ++I+GY Q+    +A +LF  M    
Sbjct: 285 VGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGH 344

Query: 425 VPPNVITW-----------------------------------NVLISGYIQNGNEDEAV 449
           V PN  T+                                   N LI+ Y ++G  + A 
Sbjct: 345 VTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECAR 404

Query: 450 DLFQRMGKNDKVKRNTASWNSLIA--GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
             F  + + + +  NTA+  +  A    +    +    GV     +S F   C+     L
Sbjct: 405 KAFNILFEKNLISYNTAADANAKALDSDESFNHEVEHTGV----GASPFTYACL-----L 455

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
              A +    K ++IH  +++    ++L + N+LI  Y+K GN   +  +F+ M  +++I
Sbjct: 456 SGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVI 515

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
           TW S+I G+  HGF   AL+LF +M   G+KPN  T+++++ A S  G++D   K F S+
Sbjct: 516 TWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSM 575

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
              + I P +EHY+ M+DL GRSG L EA+EFI  MP + D+ +W   L +CR+H N  L
Sbjct: 576 HYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKL 635

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
              A +++ + EP D     L+  +YA  G+ +D   +RK  ++       G  WIEV N
Sbjct: 636 GEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDN 695

Query: 748 LVYTFVTGGWSESYSDLLYSWLQNVPENV--------TARSSHSGLCIEEEEKEEISGIH 799
            V+ F  G  S   +  +Y  L  +   +        T    H    +E+E+KE+    H
Sbjct: 696 QVHKFHVGDTSHPQARKIYDELDELALKIKNLGYIPNTDFVLHD---VEDEQKEQYLFQH 752

Query: 800 SEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKN 859
           SEK+A+A+ALI S+  P  IR+ KN+R+C  CH   KY+S++   EI + D+   HH K+
Sbjct: 753 SEKIAVAYALI-STPKPKPIRVFKNLRVCGDCHTAIKYISIVTGREIVVRDANRFHHIKD 811

Query: 860 GQCSCGDYW 868
           G+CSC DYW
Sbjct: 812 GKCSCNDYW 820



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 153/616 (24%), Positives = 288/616 (46%), Gaps = 83/616 (13%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTK 96
           L +AI+ LD + T    ++ +    LL+ACI S ++ L + LH   ++    +D  +   
Sbjct: 24  LRKAISRLD-LTTTSPLIKSSL---LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNS 79

Query: 97  LLSVYAKCGCLDDAREVFEDM--RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ---D 151
           L+++Y+KCG  ++A  +F +M   +R+L +WSA+I  ++ +      +  F  M+Q   +
Sbjct: 80  LITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRN 139

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKLIW 210
            ++P+++ F  +L++C N   F  G  + + ++K G       V  +++ ++ K G  I 
Sbjct: 140 IIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQ 199

Query: 211 -ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-- 267
            AR  F+ M  K+ V W  MI+ Y Q+G  D+A  LF ++   E      T   L+ +  
Sbjct: 200 SARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACV 259

Query: 268 ---YNQLGQ------------CDV--------------AMEMVKRMESLGITPDVFTWTC 298
              +  LG+             DV              A+E  +++ +  +  +V +WT 
Sbjct: 260 ELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTA 319

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           +ISG+ Q+ +  +A+ LF  M    V PN  T +S + AC  L    +G ++H   +K+G
Sbjct: 320 LISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLG 379

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS------------------- 399
            +    VGNSLINMY++   +E A + F+++ +K++ S+N+                   
Sbjct: 380 LSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFNHEV 439

Query: 400 --------------MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
                         +++G    G   K  ++   + +S    N+   N LIS Y + GN+
Sbjct: 440 EHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNK 499

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           + A+ +F  MG      RN  +W S+I+G+ + G    AL +F +M      PN VT ++
Sbjct: 500 EAALQVFNDMG-----YRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIA 554

Query: 506 VLPACAYLVASNKV-KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-S 563
           VL AC+++   ++  K  +      S+   +     ++D   +SG ++ +    + M   
Sbjct: 555 VLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFD 614

Query: 564 KDIITWNSLICGYVLH 579
            D + W + +    +H
Sbjct: 615 ADALVWRTFLGSCRVH 630



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 222/477 (46%), Gaps = 57/477 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVK 94
           G L++A+ +   +        + T  +LL AC++     L ++LH++ +      DVFV 
Sbjct: 227 GLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVFVG 286

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+ +YAK   ++++R++F  M   N+ +W+A+I  Y + ++ +E ++LF  M+   + 
Sbjct: 287 CTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGHVT 346

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+ F F  +L+AC +  DF  GK +H   IKLG+S +  V NS++ +Y + G +  AR+ 
Sbjct: 347 PNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKA 406

Query: 215 FESMDEKDGVAWNS---------------------------------MISGYFQIGENDE 241
           F  + EK+ +++N+                                 ++SG   IG   +
Sbjct: 407 FNILFEKNLISYNTAADANAKALDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVK 466

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
             ++   + +      +   N LI  Y++ G  + A+++   M       +V TWT +IS
Sbjct: 467 GEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMG----YRNVITWTSIIS 522

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL-------KALAMGMEIHSLA 354
           GFA++G  ++AL+LF EM  +GV PN VT  + +SAC+ +       K        HS++
Sbjct: 523 GFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSIS 582

Query: 355 VKM---GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
            +M       D+L  + L+        LEA E +  M  D D   W + + G C+     
Sbjct: 583 PRMEHYACMVDLLGRSGLL--------LEAIEFINSMPFDADALVWRTFL-GSCRVHRNT 633

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           K  E   K      P +  T+ +L + Y   G  D+   L + M +   +K    SW
Sbjct: 634 KLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSW 690


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 214/621 (34%), Positives = 333/621 (53%), Gaps = 45/621 (7%)

Query: 292  DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
            +V +W  +I+  A+ G + +AL  F  +  +G++P   +    I +C+ L  L  G   H
Sbjct: 1106 NVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSH 1165

Query: 352  SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
              A   GF  D+ V ++LI+MYSKC +L+ A  +FD I  ++V SW SMI GY Q     
Sbjct: 1166 QQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQAD 1225

Query: 412  KAYELFIKMQE--------SDVP-PNVITWNVL--------------ISGYIQNGNEDEA 448
             A  LF    E        ++VP  +V+  +VL              + G++     D +
Sbjct: 1226 NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGS 1285

Query: 449  V-------DLFQRMGK---NDKV-----KRNTASWNSLIAGYQQLGQKNNALGVFRKM-Q 492
            +       D + + G+   + KV     +++  SWNS+IA Y Q G    AL VF  M +
Sbjct: 1286 IGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVR 1345

Query: 493  SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
                  N VT+ +VL ACA+  A    K IH  V++  LE ++ V  S+ID Y K G + 
Sbjct: 1346 HVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVE 1405

Query: 553  YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
             ++  FD M  K++ +W +++ GY +HG    ALD+F +M   G+KPN  TF+S++ A S
Sbjct: 1406 MAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS 1465

Query: 613  LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
             AG+V+ G   F ++   Y I P IEHY  M+DL+GR+G L EA   I+ M ++PD  +W
Sbjct: 1466 HAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVW 1525

Query: 673  EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
             +LL ACRIH N+DL  +A ++LF+L+P +     L+  +YA  G+  D  ++R L +  
Sbjct: 1526 GSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNR 1585

Query: 733  TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----I 787
                  G   +E+K  V+ F+ G     + +++Y +L+ +   +        +      +
Sbjct: 1586 QLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQKIGYVPNMTSVLHDV 1645

Query: 788  EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIF 847
            +EEEKE I  +HSEKLA+AF ++ S+    TI I+KN+R+C  CH   K +S + H +  
Sbjct: 1646 DEEEKEIILRVHSEKLAVAFGVMNSAPGT-TINIIKNLRVCGDCHTVIKLISKLVHRDFV 1704

Query: 848  LADSKCLHHFKNGQCSCGDYW 868
            + DSK  HHFK+G CSCGDYW
Sbjct: 1705 VRDSKRFHHFKDGVCSCGDYW 1725



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 198/400 (49%), Gaps = 44/400 (11%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           LI  Y+  G+   A+ +  ++++    P  FTW  +I     NG + QAL L+K M   G
Sbjct: 65  LIHLYSTHGRIAYAILLFYQIQN----PCTFTWNLIIRANTINGLSEQALMLYKNMVCQG 120

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           +  +  T    I ACT+  ++ +G  +H   +K GF+ DV V N+LI+ Y KC       
Sbjct: 121 IAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKC------- 173

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
                                   G+   A ++F KM+      NV++W  +ISG I  G
Sbjct: 174 ------------------------GHTRFALKVFEKMRVR----NVVSWTTVISGLISCG 205

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           +  EA  +F  +       +N  SW ++I GY +  Q   AL +F++MQ+   +PN  T+
Sbjct: 206 DLQEARRIFDEIPS-----KNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTM 260

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
           +S++ AC  +      + IH   ++  +E  + +  +LID Y+K G+I  +  +F+ M  
Sbjct: 261 VSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPR 320

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           K + TWNS+I    +HG    AL+LF +M+   +KP+  TF+ ++ A      V  G   
Sbjct: 321 KSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAY 380

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
           F  +T+ Y I P+ EHY  M +LY RS  L+EA +  +++
Sbjct: 381 FTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 200/410 (48%), Gaps = 43/410 (10%)

Query: 50  TQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLD 108
           T    +R    + LLQ C   N  HL R++HA  +      D  +  KL+ +Y+  G + 
Sbjct: 20  TPRGNIRAKKALFLLQNC--KNFKHL-RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIA 76

Query: 109 DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACG 168
            A  +F  ++    +TW+ +I A + +    + + L+  MV  G+  D F FP +++AC 
Sbjct: 77  YAILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACT 136

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
           N    + GK++H  +IK G S    V+N+++  Y KCG   +A + FE M  ++ V+W +
Sbjct: 137 NFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTT 196

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
           +ISG    G+  EA R+FD++  +                                    
Sbjct: 197 VISGLISCGDLQEARRIFDEIPSK------------------------------------ 220

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
              +V +WT MI+G+ +N +  +AL+LFK M    + PN  T+ S I ACT++  L +G 
Sbjct: 221 ---NVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGR 277

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
            IH  A+K      V +G +LI+MYSKC  ++ A  VF+ +  K + +WNSMI      G
Sbjct: 278 GIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHG 337

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
              +A  LF +M+  +V P+ IT+  ++   +   N  E    F RM ++
Sbjct: 338 LGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQH 387



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 209/441 (47%), Gaps = 51/441 (11%)

Query: 114  FEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF 173
            ++ + + N+++W+++I   +R     E +  F  + + GL P    FP  +++C    D 
Sbjct: 1099 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 1158

Query: 174  EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
             +G++ H      G      V ++++ +Y KCG+L  AR  F+ +  ++ V+W SMI+GY
Sbjct: 1159 VSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGY 1218

Query: 234  FQIGENDEAHRLFDKMCREEIKL------------------------------GVVTF-- 261
             Q  + D A  LF     EE ++                              GV  F  
Sbjct: 1219 VQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVV 1278

Query: 262  -----------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTS 310
                       N L+ +Y + GQ  V+ ++   ME      D  +W  MI+ +AQ+G + 
Sbjct: 1279 KKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEE----KDDISWNSMIAVYAQSGLSG 1334

Query: 311  QALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL 369
            +AL++F  M   VGV  N VT+++ + AC    AL  G  IH   +KM    +V VG S+
Sbjct: 1335 EALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSI 1394

Query: 370  INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
            I+MY KC  +E A++ FD +K+K+V SW +M+AGY   G   +A ++F KM  + V PN 
Sbjct: 1395 IDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNY 1454

Query: 430  ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
            IT+  +++     G  +E    F  M     ++     +  ++  + + G  N A  + +
Sbjct: 1455 ITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIK 1514

Query: 490  KMQSSCFYPNCVTILSVLPAC 510
            +M+     P+ V   S+L AC
Sbjct: 1515 RMK---MKPDFVVWGSLLGAC 1532



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 207/436 (47%), Gaps = 54/436 (12%)

Query: 19   KSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARK 78
            KSN    ++ +  L   G   EA+    S+   G    R+++   +++C     +   R 
Sbjct: 1104 KSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRM 1163

Query: 79   LH--AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQ 136
             H  AF+    E D+FV + L+ +Y+KCG L DAR +F+++  RN+ +W++MI  Y +++
Sbjct: 1164 SHQQAFV-FGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNE 1222

Query: 137  RWREVVELF--FL----MVQDG--LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM 188
            +    + LF  FL     V+DG  +  D  +   +L AC         + +H  V+K G 
Sbjct: 1223 QADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGF 1282

Query: 189  SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
                 V N+++  Y KCG+ + +++ F+ M+EKD ++WNSMI+ Y Q G + EA  +F  
Sbjct: 1283 DGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHG 1342

Query: 249  MCRE-EIKLGVVT------------------------------FNI-----LIRSYNQLG 272
            M R   ++   VT                              +N+     +I  Y + G
Sbjct: 1343 MVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCG 1402

Query: 273  QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            + ++A +   RM+      +V +WT M++G+  +GR  +ALD+F +M   GV PN +T  
Sbjct: 1403 RVEMAKKTFDRMKE----KNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFV 1458

Query: 333  SAISACTDLKALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
            S ++AC+    +  G    +++  K      +     +++++ +   L  A  +   +K 
Sbjct: 1459 SVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKM 1518

Query: 392  K-DVYSWNSMIAGYCQ 406
            K D   W S++ G C+
Sbjct: 1519 KPDFVVWGSLL-GACR 1533



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 166/337 (49%), Gaps = 7/337 (2%)

Query: 61   INLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
            +++L AC   +   +   +H F+     +  + V   L+  YAKCG    +++VF+ M E
Sbjct: 1255 VSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEE 1314

Query: 120  RNLYTWSAMIGAYSRDQRWREVVELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKL 178
            ++  +W++MI  Y++     E +E+F  MV+  G+  +      +L AC + G   AGK 
Sbjct: 1315 KDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKC 1374

Query: 179  MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
            +H  VIK+ +     V  S++ +Y KCG++  A++ F+ M EK+  +W +M++GY   G 
Sbjct: 1375 IHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGR 1434

Query: 239  NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWT 297
              EA  +F KM R  +K   +TF  ++ + +  G  +        M+    I P +  + 
Sbjct: 1435 AKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYG 1494

Query: 298  CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            CM+  F + G  ++A +L K M    + P+ V   S + AC   K + +G EI +  +  
Sbjct: 1495 CMVDLFGRAGCLNEAYNLIKRMK---MKPDFVVWGSLLGACRIHKNVDLG-EIAAQKLFE 1550

Query: 358  GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
               D+      L N+Y+        ER+  ++K++ +
Sbjct: 1551 LDPDNCGYYVLLSNLYADAGRWADVERMRMLMKNRQL 1587



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 154/342 (45%), Gaps = 42/342 (12%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFV 93
           NG   +A+ +  ++  QG    + T+  +++AC +  SI L + +H + +      DVFV
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162

Query: 94  KTKLLSVYAKCG-----------------------------C--LDDAREVFEDMRERNL 122
           +  L+  Y KCG                             C  L +AR +F+++  +N+
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            +W+AMI  Y R+Q+  E +ELF  M  + +FP+++    +++AC   G    G+ +H  
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
            IK  +     +  +++ +Y KCG +  A   FE+M  K    WNSMI+     G   EA
Sbjct: 283 AIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMIS 301
             LF +M R  +K   +TF  ++ +   +           RM +  GI P    + CM  
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTE 402

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
            +A++    +A   FK    VG + N  +I      C D +A
Sbjct: 403 LYARSNNLDEA---FKSTKEVGSLANSPSI------CFDARA 435



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 169/348 (48%), Gaps = 51/348 (14%)

Query: 386  FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV----------L 435
            +  +   +V+SWNS+IA   + G   +A   F  +++  + P   ++            L
Sbjct: 1099 YKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDL 1158

Query: 436  ISGYIQN------GNEDE------AVDLFQRMGKNDKVK--------RNTASWNSLIAGY 475
            +SG + +      G E +       +D++ + G+    +        RN  SW S+I GY
Sbjct: 1159 VSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGY 1218

Query: 476  QQLGQKNNALGVFR-------KMQSSCFYP-NCVTILSVLPACAYLVASNKVKEIHGCVL 527
             Q  Q +NAL +F+       +++     P + V ++SVL AC+ +      + +HG V+
Sbjct: 1219 VQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVV 1278

Query: 528  RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
            ++  + S+ V N+L+D YAK G  + S+ +FD M  KD I+WNS+I  Y   G    AL+
Sbjct: 1279 KKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALE 1338

Query: 588  LFDQM-KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY-----S 641
            +F  M +  G++ N  T  +++LA + AG +  GK +        Q+I M   Y     +
Sbjct: 1339 VFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIH------DQVIKMDLEYNVCVGT 1392

Query: 642  AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            ++ID+Y + G++E A +  + M  E +   W A++    +HG    A+
Sbjct: 1393 SIIDMYCKCGRVEMAKKTFDRMK-EKNVKSWTAMVAGYGMHGRAKEAL 1439



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 35/251 (13%)

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
           T +WN +I      G    AL +++ M       +  T   V+ AC   ++ +  K +HG
Sbjct: 90  TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYS------------------------------ 554
            +++      + V N+LID Y K G+  ++                              
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209

Query: 555 -RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
            R IFD + SK++++W ++I GY+ +     AL+LF +M++  + PN  T +S+I A + 
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269

Query: 614 AGMVDLGKKVF-CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
            G++ LG+ +   +I  C +I   +   +A+ID+Y + G +++A+E  E MP       W
Sbjct: 270 MGILTLGRGIHDYAIKNCIEI--GVYLGTALIDMYSKCGSIKDAIEVFETMP-RKSLPTW 326

Query: 673 EALLTACRIHG 683
            +++T+  +HG
Sbjct: 327 NSMITSLGVHG 337



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 106/222 (47%), Gaps = 8/222 (3%)

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           +++IH  ++R  L +   +   LI  Y+  G I Y+  +F  + +    TWN +I    +
Sbjct: 43  LRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTI 102

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           +G    AL L+  M   G+  ++ TF  +I A +    +DLGK V  S+ + Y     + 
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIK-YGFSGDVF 161

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
             + +ID Y + G    A++  E M +    S W  +++     G++  A     R+FD 
Sbjct: 162 VQNNLIDFYFKCGHTRFALKVFEKMRVRNVVS-WTTVISGLISCGDLQEA----RRIFDE 216

Query: 699 EPG-DVLIQRLILQIYAICGKPEDALKV-RKLERENTRRNSF 738
            P  +V+    ++  Y    +PE+AL++ ++++ EN   N +
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEY 258


>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 204/616 (33%), Positives = 333/616 (54%), Gaps = 51/616 (8%)

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGIT-PDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           +L +    L + DV M+   R+    +  P+ F WT +I G+A  G   +++ L+  M  
Sbjct: 73  VLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRR 132

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG-FTDDVLVGNSLINMYSKCEELE 380
            G+ P   T T+ + AC+    + +G ++H+  + +G F  D+ VGN+LI+M        
Sbjct: 133 QGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDM-------- 184

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
                                  Y + G  G  + +F +M + DV    I+W  LI  Y 
Sbjct: 185 -----------------------YVKCGCLGCGHRVFDEMLDRDV----ISWTSLIVAYA 217

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           + GN + A +LF  +   D V     +W +++ GY Q  +   AL VF +MQ++    + 
Sbjct: 218 KVGNMEAASELFDGLPMKDMV-----AWTAMVTGYAQNARPREALEVFERMQAAGVKTDE 272

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSL--ESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           VT++ V+ ACA L A+     +     +      S++ V ++LID YAK G++  +  +F
Sbjct: 273 VTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVF 332

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           + M  +++ +++S+I G+ +HG   AA++LFD+M    +KPNR TF+ ++ A S AGMV+
Sbjct: 333 ERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVE 392

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            G+++F  + EC+ + P  +HY+ M+DL GR+G+LEEA+  ++ MP+ P   +W ALL A
Sbjct: 393 QGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGA 452

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
           CRIHGN D+A +A   LF+LEP  +    L+  IYA  G+ +D  KVRKL R    + + 
Sbjct: 453 CRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNP 512

Query: 739 GQCWIE-VKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEK 792
           G  W+E  K +++ F  G  S   S  +   L+++ + +        L      I +EEK
Sbjct: 513 GCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEK 572

Query: 793 EEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
           + +   HSEKLALAF L+ ++ A  TIRIVKN+R+C  CH      S +   EI + D+ 
Sbjct: 573 KRLLMSHSEKLALAFGLL-TTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNM 631

Query: 853 CLHHFKNGQCSCGDYW 868
             HHF++G+CSCG++W
Sbjct: 632 RFHHFRDGRCSCGNFW 647



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 146/574 (25%), Positives = 265/574 (46%), Gaps = 71/574 (12%)

Query: 51  QGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDD 109
           Q  K+  +  +++L  C   N +   +++HA +     E   FV  KLL    K     D
Sbjct: 33  QEQKILESRLVSVLHGCTHINQV---KQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMD 89

Query: 110 A--REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC 167
              R VF+ +   N + W+A+I  Y+    + E V L+  M + G+ P  F F  +L+AC
Sbjct: 90  PYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKAC 149

Query: 168 GNCGDFEAGKLMHSLVIKL-GMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
               D   G+ +H+  I + G      V N+++ +YVKCG L    R F+ M ++D ++W
Sbjct: 150 SAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISW 209

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
            S+I  Y ++G  + A  LFD +  +++    V +  ++  Y Q  +   A+E+ +RM++
Sbjct: 210 TSLIVAYAKVGNMEAASELFDGLPMKDM----VAWTAMVTGYAQNARPREALEVFERMQA 265

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
            G+  D                         E++ VGV          ISAC  L A   
Sbjct: 266 AGVKTD-------------------------EVTLVGV----------ISACAQLGAAKY 290

Query: 347 GMEIHSLAVKMGF--TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
              +  +A + GF  T +V+VG++LI+MY+KC  +E A +VF+ +++++VYS++SMI G+
Sbjct: 291 ANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGF 350

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
              G  G A ELF +M ++++ PN +T+  +++     G  ++   LF  M +   V  +
Sbjct: 351 AMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPS 410

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
              +  ++    + G+   AL + + M  +   P+     ++L AC  +  +  + +I  
Sbjct: 411 EDHYACMVDLLGRAGRLEEALNLVKMMPMN---PHGGVWGALLGAC-RIHGNPDMAQIAA 466

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSG---NIVYSRTIF--DGMSSKDIITWNSLICGYVLH 579
             L     + +     L + YA +G   ++   R +    G+      +W     G ++H
Sbjct: 467 SHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKG-IIH 525

Query: 580 GFW-------------HAALDLFDQMKSFGLKPN 600
            F+              A  DL D++K  G +PN
Sbjct: 526 EFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPN 559



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 157/340 (46%), Gaps = 39/340 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVF 92
            G   E++ + +S+  QG      T+  LL+AC  +  ++L R++H    L+     D++
Sbjct: 117 QGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLY 176

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERN------------------------------- 121
           V   L+ +Y KCGCL     VF++M +R+                               
Sbjct: 177 VGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKD 236

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
           +  W+AM+  Y+++ R RE +E+F  M   G+  D+     ++ AC   G  +    +  
Sbjct: 237 MVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRD 296

Query: 182 LVIKLGMSCVRR--VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           +  + G        V ++++ +Y KCG +  A + FE M+E++  +++SMI G+   G  
Sbjct: 297 VAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLA 356

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTC 298
             A  LFD+M + EIK   VTF  ++ + +  G  +   ++   ME   G+ P    + C
Sbjct: 357 GAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYAC 416

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
           M+    + GR  +AL+L K M    + P+G    + + AC
Sbjct: 417 MVDLLGRAGRLEEALNLVKMMP---MNPHGGVWGALLGAC 453



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 142/320 (44%), Gaps = 19/320 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA---RKLHAFLNLVTEIDV 91
           N R  EA+ V + +   G K    T + ++ AC    +   A   R +          +V
Sbjct: 250 NARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNV 309

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            V + L+ +YAKCG ++DA +VFE M ERN+Y++S+MI  ++        +ELF  M++ 
Sbjct: 310 VVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKT 369

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL-GMSCVRRVRNSVLAVYVKCGKLIW 210
            + P+   F  +L AC + G  E G+ + +++ +  G++        ++ +  + G+L  
Sbjct: 370 EIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEE 429

Query: 211 ARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
           A    + M     G  W +++ G  +I  N +  ++      E    G+  + +L   Y 
Sbjct: 430 ALNLVKMMPMNPHGGVWGALL-GACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYA 488

Query: 270 QLGQCDVAMEMVKRMESLGITPDV-FTWTCMISGF-----------AQNGRTSQAL-DLF 316
             G+ D   ++ K M + G+  +   +W     G             ++    QAL DL 
Sbjct: 489 SAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKKGIIHEFFAGDMSHPKSREIKQALEDLL 548

Query: 317 KEMSFVGVMPNGVTITSAIS 336
             + ++G  PN  ++   IS
Sbjct: 549 DRLKYLGYQPNLSSVAYDIS 568



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 118/248 (47%), Gaps = 20/248 (8%)

Query: 490 KMQSSCFYPNCVT---------ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
           ++Q+  F P  V          ++SVL  C ++   N+VK++H  + R+ LE    V+  
Sbjct: 20  QLQTQSFIPFSVRQEQKILESRLVSVLHGCTHI---NQVKQVHAHIFRKGLEQCCFVLAK 76

Query: 541 LIDTYAKSGNIV--YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           L+ T  K    +  Y R +F  +   +   W +LI GY L G +  ++ L++ M+  G+ 
Sbjct: 77  LLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIG 136

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           P   TF +++ A S A  V+LG++V             +   + +ID+Y + G L     
Sbjct: 137 PVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHR 196

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP-GDVLIQRLILQIYAICG 717
             ++M ++ D   W +L+ A    GN++    A   LFD  P  D++    ++  YA   
Sbjct: 197 VFDEM-LDRDVISWTSLIVAYAKVGNME----AASELFDGLPMKDMVAWTAMVTGYAQNA 251

Query: 718 KPEDALKV 725
           +P +AL+V
Sbjct: 252 RPREALEV 259


>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
          Length = 575

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 198/552 (35%), Positives = 313/552 (56%), Gaps = 20/552 (3%)

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD-DVLVGNSLINMYSKCEELEAA 382
            M     +++++ A  DL   A    +H+ A+K GF   D+ V  +L+  Y+K    + A
Sbjct: 37  AMQASAALSASVPAMRDLGLGAA--SLHARALKSGFAAADLFVRTALVEAYAKAGRADLA 94

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
              FD    +DV+  N M+A Y   G   +A  +F  M+E D+    ++WN +I GY  N
Sbjct: 95  RAAFDEAPRRDVFLCNVMLAAYVTRGEVAEARRVFDGMRERDM----VSWNTMIHGYAVN 150

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G  D A ++F   G +D   R+  SW+S+++ Y +  +  +AL ++R+M+++C  P+C T
Sbjct: 151 GEVDLAREVFN--GMDD---RDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTT 205

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
           ++SVL AC+ + A     E+H  V    +E  + +  +LID YAK G+I  S  +F  M 
Sbjct: 206 MVSVLSACSDMGALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMP 265

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            KD++TW+S+I G   HGF H AL LF +M S GL+PN  TF+ ++++ +  G+V  GKK
Sbjct: 266 VKDVLTWSSMIIGLANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKK 325

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F S++  + + P ++HY  M+DL GRSG +EEA + I DMP EPD+ IW ALL ACRI+
Sbjct: 326 YFSSMSVVHGVTPKVQHYGCMVDLLGRSGHIEEAKQLIRDMPFEPDAVIWRALLGACRIY 385

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK-LERENTRRNSFGQC 741
            N+++A  A+ +L  L+P       L+  IYA     E   ++R+ L RE  +R   G+ 
Sbjct: 386 KNVEVAEEAMAKLRVLDPHADGHYVLLSNIYAQANSWEGVAEMRRTLRRERIQRIP-GRS 444

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--TARSSHSGLC---IEEEEKEEIS 796
            IE +N ++ F++G  S   S  +Y  L  + + +        +GL    I+E+ KE   
Sbjct: 445 SIEWQNTIHEFISGDRSHPRSKEIYKMLGEMMDRLRQAGYKPMTGLVLQDIDEQSKERAL 504

Query: 797 GIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHH 856
             HSEKLA+AF L+ ++ A  T+RI KN+R C  CH   K +++++  ++ + D    HH
Sbjct: 505 AEHSEKLAVAFGLL-TTPAGSTLRITKNLRACEDCHSAIKLIALLYERKLIIRDRNRFHH 563

Query: 857 FKNGQCSCGDYW 868
           F  G+CSC DYW
Sbjct: 564 FSEGRCSCKDYW 575



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 170/338 (50%), Gaps = 22/338 (6%)

Query: 179 MHSLVIKLGMSCVRR-VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
           +H+  +K G +     VR +++  Y K G+   AR  F+    +D    N M++ Y   G
Sbjct: 61  LHARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRG 120

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
           E  EA R+FD M   ++    V++N +I  Y   G+ D+A E+   M+      D F+W+
Sbjct: 121 EVAEARRVFDGMRERDM----VSWNTMIHGYAVNGEVDLAREVFNGMDD----RDAFSWS 172

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            M+S + +  R+  AL+L++EM    V P+  T+ S +SAC+D+ ALA+G E+H      
Sbjct: 173 SMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGALAVGAEVHQFVESN 232

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           G   DV +G +LI+MY+KC ++E + RVF  +  KDV +W+SMI G    G+   A  LF
Sbjct: 233 GVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGLANHGFGHDALSLF 292

Query: 418 IKMQESDVPPNVITW-NVLIS----GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
            +M    + PN +T+  VLIS    G + +G +      F  M     V      +  ++
Sbjct: 293 SRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKK-----YFSSMSVVHGVTPKVQHYGCMV 347

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               + G    A  + R M    F P+ V   ++L AC
Sbjct: 348 DLLGRSGHIEEAKQLIRDMP---FEPDAVIWRALLGAC 382



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 146/297 (49%), Gaps = 9/297 (3%)

Query: 56  RRNTYI--NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREV 113
           RR+ ++   +L A +    +  AR++    + + E D+     ++  YA  G +D AREV
Sbjct: 103 RRDVFLCNVMLAAYVTRGEVAEARRV---FDGMRERDMVSWNTMIHGYAVNGEVDLAREV 159

Query: 114 FEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF 173
           F  M +R+ ++WS+M+ AY++ +R ++ +EL+  M    + PD      +L AC + G  
Sbjct: 160 FNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMGAL 219

Query: 174 EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
             G  +H  V   G+    ++  +++ +Y KCG +  + R F SM  KD + W+SMI G 
Sbjct: 220 AVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMIIGL 279

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPD 292
              G   +A  LF +M  E ++   VTF  ++ S   LG      +    M  + G+TP 
Sbjct: 280 ANHGFGHDALSLFSRMLSEGLQPNEVTFIGVLISCTHLGLVSDGKKYFSSMSVVHGVTPK 339

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
           V  + CM+    ++G   +A  L ++M F    P+ V   + + AC   K + +  E
Sbjct: 340 VQHYGCMVDLLGRSGHIEEAKQLIRDMPF---EPDAVIWRALLGACRIYKNVEVAEE 393


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 199/578 (34%), Positives = 313/578 (54%), Gaps = 37/578 (6%)

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P     +  ++ CT L+ L  G  IH+      F DD+++ N ++NMY+KC  LE A+ +
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-------- 437
           FD +  KD+ SW  +I+GY Q+G   +A  LF KM      PN  T + L+         
Sbjct: 163 FDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSD 222

Query: 438 -------------GYIQNGNEDEAV-DLFQRMGK--------NDKVKRNTASWNSLIAGY 475
                        GY  N +   ++ D++ R           N    +N  SWN+LIAG+
Sbjct: 223 HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGH 282

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
            + G+  + + +F +M    F P   T  SV  ACA   +  + K +H  V++   +   
Sbjct: 283 ARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIA 342

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            + N+LID YAKSG+I  ++ +F  +  +DI++WNS+I GY  HG    AL LF+QM   
Sbjct: 343 YIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKA 402

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
            ++PN  TFLS++ A S +G++D G+  F  + + ++I   + H+  ++DL GR+G+L E
Sbjct: 403 KVQPNEITFLSVLTACSHSGLLDEGQYYF-ELMKKHKIEAQVAHHVTVVDLLGRAGRLNE 461

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A +FIE+MPI+P +++W ALL +CR+H N+DL V A E++F+L+P D     L+  IYA 
Sbjct: 462 ANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYAS 521

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN 775
            G+  DA KVRK+ +E+  +      W+E++N V+ FV    S    + +    + +   
Sbjct: 522 AGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGK 581

Query: 776 V-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
           +        +SH    + ++++E     HSEKLALAFA++ +     TIRI KNIR+C  
Sbjct: 582 IKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGL-TIRIKKNIRICGD 640

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   K+ S +   EI + D+   HHF +G CSC DYW
Sbjct: 641 CHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 211/468 (45%), Gaps = 50/468 (10%)

Query: 42  ITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSV 100
           + VLD I     +  R  Y  +L  C     +   R +HA +   T E D+ +   +L++
Sbjct: 90  LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149

Query: 101 YAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLF 160
           YAKCG L++A+++F+ M  +++ +W+ +I  YS+  +  E + LF  M+  G  P++F  
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209

Query: 161 PKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE 220
             +L+A G       G+ +H+  +K G      V +S+L +Y +   +  A+  F S+  
Sbjct: 210 SSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA 269

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------- 261
           K+ V+WN++I+G+ + GE +   RLF +M R+  +    T+                   
Sbjct: 270 KNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWV 329

Query: 262 ----------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ 305
                           N LI  Y + G    A ++ +R+    +  D+ +W  +ISG+AQ
Sbjct: 330 HAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL----VKQDIVSWNSIISGYAQ 385

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
           +G  ++AL LF++M    V PN +T  S ++AC+    L  G     L  K      V  
Sbjct: 386 HGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAH 445

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ----AGYCGKAYELFIKMQ 421
             +++++  +   L  A +  + +  K   +    + G C+          A E   ++ 
Sbjct: 446 HVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELD 505

Query: 422 ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
             D  P+V+  N+    Y   G   +A  + ++M K   VK+  A SW
Sbjct: 506 PHDSGPHVLLSNI----YASAGRLSDAAKV-RKMMKESGVKKEPACSW 548



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 181/364 (49%), Gaps = 11/364 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           +G+ +EA+ +   +   G +    T  +LL+A     S H  R+LHAF L    +++V V
Sbjct: 184 SGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHV 243

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + LL +YA+   + +A+ +F  +  +N+ +W+A+I  ++R      V+ LF  M++ G 
Sbjct: 244 GSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGF 303

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P  F +  +  AC + G  E GK +H+ VIK G   +  + N+++ +Y K G +  A++
Sbjct: 304 EPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKK 363

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F  + ++D V+WNS+ISGY Q G   EA +LF++M + +++   +TF  ++ + +  G 
Sbjct: 364 VFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGL 423

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
            D      + M+   I   V     ++    + GR ++A    +EM    + P      +
Sbjct: 424 LDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMP---IKPTAAVWGA 480

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDD---VLVGNSLINMYSKCEELEAAERVFDMIK 390
            + +C   K + +G+       ++   D    VL    L N+Y+    L  A +V  M+K
Sbjct: 481 LLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVL----LSNIYASAGRLSDAAKVRKMMK 536

Query: 391 DKDV 394
           +  V
Sbjct: 537 ESGV 540


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 219/655 (33%), Positives = 335/655 (51%), Gaps = 83/655 (12%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++  W  M+ G A +     AL+++  M  +G +PN  +    + +C   KA   G +I
Sbjct: 27  PNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQI 86

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELE------------------------------ 380
           H+  +K+G   D  V  SLI+MY++   LE                              
Sbjct: 87  HAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGYASRGDF 146

Query: 381 -AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN----------- 428
            +A +VFD I ++DV SWN+MI GY + G   +A ELF +M  ++V P+           
Sbjct: 147 RSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSAC 206

Query: 429 -----------VITW-----------------NVLISGYIQNGNEDEAVDLFQRMGKNDK 460
                      V +W                 N LI  Y + G+ + A  LF+ +   D 
Sbjct: 207 AQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDV 266

Query: 461 VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
           V     SWN+LI GY        AL +F++M  S   PN VT+LSVLPACA+L A +  +
Sbjct: 267 V-----SWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGR 321

Query: 521 EIHGCVLRR--SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
            IH  + ++   + +   +  SLID YAK G+I  +  +F+ M  + + +WN++I G+ +
Sbjct: 322 WIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAM 381

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           HG  +AA DLF +M+   ++P+  TF+ ++ A S +G++DLG+++F S+T+ Y + P +E
Sbjct: 382 HGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLE 441

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
           HY  MIDL G SG  +EA E I  MP+EPD  IW +LL AC+ HGN++LA    ++L  +
Sbjct: 442 HYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKI 501

Query: 699 EPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS 758
           EP +     L+  IYA  G+ ED  +VR +      +   G   IEV ++V+ F+ G   
Sbjct: 502 EPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIGDKL 561

Query: 759 ESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSS 813
                 +Y  L+ +            +S     +EEE KE     HSEKLA+AF LI S+
Sbjct: 562 HPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI-ST 620

Query: 814 QAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +    + IVKN+R+C +CHE  K +S ++  EI   D    HHF++G CSC DYW
Sbjct: 621 KPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 675



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 139/548 (25%), Positives = 255/548 (46%), Gaps = 80/548 (14%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           L  A  VFE ++E NL  W+ M+  ++        +E++  MV  G  P+ + FP +L++
Sbjct: 14  LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C     FE G+ +H+ V+KLG    R V  S++++Y + G L  AR+ F++   +D V+ 
Sbjct: 74  CAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSC 133

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
            ++I+GY   G+   A ++FD++   +    VV++N +I  Y + G+ + A+E+ K M  
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERD----VVSWNAMITGYVENGRYEEALELFKEMMR 189

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
             + PD  T   ++S  AQ+G                                   ++ +
Sbjct: 190 TNVRPDEGTLVSVVSACAQSG-----------------------------------SIEL 214

Query: 347 GMEIHS----LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           G ++HS         GF+  + + N+LI++YSKC ++E A  +F+ +  KDV SWN++I 
Sbjct: 215 GRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIG 274

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVIT------------------W-NVLISGYIQNG 443
           GY       +A  LF +M  S   PN +T                  W +V I   ++  
Sbjct: 275 GYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGV 334

Query: 444 NEDEA-----VDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
             + +     +D++ + G         N  + R+ +SWN++I G+   G+ N A  +F +
Sbjct: 335 TNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSR 394

Query: 491 MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSG 549
           M+ +   P+ +T + +L AC++    +  ++I   + +  +L   L     +ID    SG
Sbjct: 395 MRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSG 454

Query: 550 NIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSI 607
               +  +   M    D + W SL+     HG    A + F Q K   ++P N G+++ +
Sbjct: 455 LFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELA-ESFAQ-KLIKIEPENSGSYVLL 512

Query: 608 ILAHSLAG 615
              ++ AG
Sbjct: 513 SNIYATAG 520



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 178/410 (43%), Gaps = 71/410 (17%)

Query: 63  LLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE------ 115
           LL++C  S +    R++HA  L L   +D +V T L+S+YA+ G L+DAR+VF+      
Sbjct: 70  LLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRD 129

Query: 116 -------------------------DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
                                    ++ ER++ +W+AMI  Y  + R+ E +ELF  M++
Sbjct: 130 VVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMR 189

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL----GMSCVRRVRNSVLAVYVKCG 206
             + PD+     ++ AC   G  E G+ +HS V       G S   ++ N+++ +Y KCG
Sbjct: 190 TNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCG 249

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            +  A   FE +  KD V+WN++I GY       EA  LF +M R       VT   ++ 
Sbjct: 250 DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLP 309

Query: 267 SYNQLGQCDVA------------------------MEMVKRMESLGITPDVF-------- 294
           +   LG  D+                         ++M  +   +     VF        
Sbjct: 310 ACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSL 369

Query: 295 -TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HS 352
            +W  MI GFA +GR + A DLF  M    V P+ +T    +SAC+    L +G +I  S
Sbjct: 370 SSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKS 429

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMI 401
           +      T  +     +I++        EA E +  M  + D   W S++
Sbjct: 430 MTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLL 479



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 180/368 (48%), Gaps = 16/368 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF-- 92
           NGR  EA+ +   +     +    T ++++ AC  S SI L R++H++++   +   F  
Sbjct: 174 NGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSS 233

Query: 93  ---VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
              +   L+ +Y+KCG ++ A  +FE +  +++ +W+ +IG Y+    ++E + LF  M+
Sbjct: 234 SLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEML 293

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK--LGMSCVRRVRNSVLAVYVKCGK 207
           + G  P+D     +L AC + G  + G+ +H  + K   G++    +R S++ +Y KCG 
Sbjct: 294 RSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGD 353

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           +  A + F SM  +   +WN+MI G+   G  + A  LF +M    ++   +TF  L+ +
Sbjct: 354 IEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSA 413

Query: 268 YNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            +  G  D+  ++ K M +   +TP +  + CMI     +G   +A ++   M    + P
Sbjct: 414 CSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMP---MEP 470

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAER 384
           +GV   S + AC     L +     S A K+   +    G+ ++  N+Y+     E   R
Sbjct: 471 DGVIWCSLLKACKKHGNLELA---ESFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVAR 527

Query: 385 VFDMIKDK 392
           V  ++  K
Sbjct: 528 VRGVLNGK 535


>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  348 bits (894), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 200/597 (33%), Positives = 322/597 (53%), Gaps = 60/597 (10%)

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           T  S +  C DLK++  G  IHS+        D ++G+ L+ MY  C +L    R+FD +
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV--------------PPNVITWNVL 435
            ++ V+ WN ++ GY + G   ++  LF +M+E  +                +VI+WN +
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222

Query: 436 ISGYIQNGNEDEAVDLFQRM---GKNDKV------------------------------- 461
           ISGY+ NG  ++ +DLF++M   G N  +                               
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNNCLLDMYSKSGNLNSAIQVF 282

Query: 462 ----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASN 517
               +R+  SW S+IAGY + G  + ++ +F +M+    +PN +T+  +LPACA L A  
Sbjct: 283 ETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSITMACILPACASLAALE 342

Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
           + +EIHG +LR        V N+L+D Y K G +  +R +FD +  KD+++W  +I GY 
Sbjct: 343 RGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYG 402

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
           +HG+   A+  F++M++ G++P+  +F+SI+ A S +G++D G   F  +     I P  
Sbjct: 403 MHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKS 462

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
           EHY+ ++DL  R+G L +A +FI+ MPIEPD++IW ALL  CRI+ ++ LA    E +F+
Sbjct: 463 EHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFE 522

Query: 698 LEPGDVLIQRLILQIYAICGKPEDALKVR-KLERENTRRNSFGQCWIEVKNLVYTFVTGG 756
           LEP +     L+  IYA   K E+  K+R ++ R   R+N  G  WIE+K  V+ FVTG 
Sbjct: 523 LEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNP-GCSWIEIKGKVHIFVTGD 581

Query: 757 WSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIG 811
            S   ++ +   L+        E    +  ++ +  ++ EKE     HSEK+A+AF ++ 
Sbjct: 582 SSHPLANKIELLLKKTRTRMKEEGHFPKMRYALIKADDTEKEMALCGHSEKIAMAFGIL- 640

Query: 812 SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S     T+R+ KN+R+C  CHE AK++S M   +I L DS   HHFK+G CSC  +W
Sbjct: 641 SLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 697



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 221/469 (47%), Gaps = 67/469 (14%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEID 90
            C  G L  A+ +++       ++R  TY ++LQ C D  SI   R++H+ +     E+D
Sbjct: 78  FCELGNLRRAMELINQSPKPDLELR--TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVD 135

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
             + +KL+ +Y  CG L + R +F+ +    ++ W+ ++  Y++   +RE + LF  M +
Sbjct: 136 GVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRE 195

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G                                      +RRV +              
Sbjct: 196 LG--------------------------------------IRRVES-------------- 203

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------N 262
           AR+ F+ + ++D ++WNSMISGY   G +++   LF++M    I   + T         N
Sbjct: 204 ARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVELTLNN 263

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            L+  Y++ G  + A+++    E++G    V +WT MI+G+A+ G +  ++ LF EM   
Sbjct: 264 CLLDMYSKSGNLNSAIQV---FETMG-ERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKE 319

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
            + PN +T+   + AC  L AL  G EIH   ++ GF+ D  V N+L++MY KC  L  A
Sbjct: 320 DLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLA 379

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
             +FDMI +KD+ SW  MIAGY   GY  +A   F +M+ S + P+ +++  ++     +
Sbjct: 380 RLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHS 439

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           G  DE    F  M  N  ++  +  +  ++    + G  + A    + M
Sbjct: 440 GLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMM 488



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 155/311 (49%), Gaps = 11/311 (3%)

Query: 83  LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
           L  +  +++ +   LL +Y+K G L+ A +VFE M ER++ +W++MI  Y+R+      V
Sbjct: 251 LATMVSVELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSV 310

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
            LF  M ++ LFP+      IL AC +    E G+ +H  +++ G S  R V N+++ +Y
Sbjct: 311 RLFHEMEKEDLFPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMY 370

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
           +KCG L  AR  F+ + EKD V+W  MI+GY   G   EA   F++M    I+   V+F 
Sbjct: 371 LKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFI 430

Query: 263 ILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
            ++ + +  G  D        M  +  I P    + C++   A+ G  S+A    K M  
Sbjct: 431 SILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMP- 489

Query: 322 VGVMPNGVTITSAISACT---DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
             + P+     + +  C    D+K LA  +  H   ++   T   ++   L N+Y++ E+
Sbjct: 490 --IEPDATIWGALLCGCRIYHDVK-LAEKVAEHVFELEPENTGYYVL---LANIYAEAEK 543

Query: 379 LEAAERVFDMI 389
            E  +++ + I
Sbjct: 544 WEEVKKLRERI 554


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  348 bits (894), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 213/606 (35%), Positives = 325/606 (53%), Gaps = 40/606 (6%)

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  +I  + +N  +   + LF E+     +P+  T+   I  C  L  +  G +IH LA+
Sbjct: 81  WNTIIKCYVENQFSHDGIVLFHELVH-EYLPDNFTLPCVIKGCARLGVVQEGKQIHGLAL 139

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K+GF  DV V  SL+NMYSKC E++ A +VFD + DKDV  WNS+I GY + G    A +
Sbjct: 140 KIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQ 199

Query: 416 LFIKMQESD--------------------------VP-PNVITWNVLISGYIQNGNEDEA 448
           LF +M E D                          +P  N+++WN +I+GY+++G+ D A
Sbjct: 200 LFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSA 259

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
           ++LF +M   D V     +WN +IAGY+  GQ  +A+ +F  M      P+  T++SVL 
Sbjct: 260 LELFYQMPIWDLV-----TWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLS 314

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT 568
           A + L    K + IH  + +   E    +  SLI+ YAK G I  + T+F  +  K +  
Sbjct: 315 AVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGH 374

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT 628
           W ++I G  +HG  + AL LF +M   GLKPN   F+ ++ A + AG+VD G++ F  + 
Sbjct: 375 WTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMM 434

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
             Y+I P +EHY  ++D+  R+G LEEA   IE+MPI P+  IW +LL   R HG ID+ 
Sbjct: 435 NEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIG 494

Query: 689 VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL 748
             A +R+ ++ P  +    L+  +YA  G  E    VR++  +   R   G   +E K  
Sbjct: 495 EYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGT 554

Query: 749 VYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIE-EEEKEEISGIHSEK 802
           ++ F+ G  S   +  +Y+ +  + E +        ++   LCIE E+EKE     HSE+
Sbjct: 555 LHEFIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSER 614

Query: 803 LALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQC 862
           LA+AF LI + +    IRI+KN+R+C  CH   K +S ++  EI + D+   HHFKNG C
Sbjct: 615 LAIAFGLI-NVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSC 673

Query: 863 SCGDYW 868
           SC DYW
Sbjct: 674 SCMDYW 679



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 144/461 (31%), Positives = 230/461 (49%), Gaps = 40/461 (8%)

Query: 78  KLHAFLNLVTEI--DVFVKTKLLSVYA--KCGCLDDAREVFEDMRERNLYTWSAMIGAYS 133
           +LHAF +L T I    FV ++LL++Y+  K   L  AR +F+ ++ R+L  W+ +I  Y 
Sbjct: 31  QLHAF-SLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYV 89

Query: 134 RDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR 193
            +Q   + + LF  +V + L PD+F  P +++ C   G  + GK +H L +K+G      
Sbjct: 90  ENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVF 148

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
           V+ S++ +Y KCG++  AR+ F+ M +KD V WNS+I GY + GE D A +LF++M   +
Sbjct: 149 VQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERD 208

Query: 254 I-----------KLG----------------VVTFNILIRSYNQLGQCDVAMEMVKRMES 286
                       K G                +V++N +I  Y + G  D A+E+  +M  
Sbjct: 209 AFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMP- 267

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
                D+ TW  MI+G+  NG+   A+ +F  M  +G  P+  T+ S +SA + L  L  
Sbjct: 268 ---IWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGK 324

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G  IHS   K GF  D ++G SLI MY+KC  +E+A  VF  I+ K V  W ++I G   
Sbjct: 325 GRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGI 384

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
            G    A  LF++M ++ + PN I +  +++     G  D+    F  M    K++    
Sbjct: 385 HGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLE 444

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
            +  L+    + G    A      M  S   PN V  +S+L
Sbjct: 445 HYGCLVDILCRAGHLEEAKNTIENMPIS---PNKVIWMSLL 482



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 99/209 (47%), Gaps = 3/209 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           NG+  +A+ +   +   G++    T +++L A      +   R +H+++     E+D  +
Sbjct: 284 NGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGIL 343

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +YAKCGC++ A  VF  ++++ +  W+A+I            + LF  M + GL
Sbjct: 344 GTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGL 403

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVI-KLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            P+  +F  +L AC + G  + G+    +++ +  +         ++ +  + G L  A+
Sbjct: 404 KPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAK 463

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGEND 240
              E+M    + V W S++ G    G+ D
Sbjct: 464 NTIENMPISPNKVIWMSLLGGSRNHGKID 492


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  348 bits (894), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 213/610 (34%), Positives = 315/610 (51%), Gaps = 54/610 (8%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L RSY  LG+ D ++ +  R ++    P VF WT +I G A  G   QAL+ + +M   G
Sbjct: 68  LQRSYASLGRLDYSVALFGRTQN----PSVFFWTAIIHGHALRGLHEQALNFYAQMLTQG 123

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V PN  T +S +  C     +  G  +HS AVK+GF  D+ V   L+++Y++        
Sbjct: 124 VEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYAR-------- 171

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
                    DV S                A +LF  M E     ++++   +++ Y ++G
Sbjct: 172 -------GGDVVS----------------AQQLFDTMPEK----SLVSLTAMLTCYAKHG 204

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
             D A  LF  M + D V      WN +I GY Q G  N AL +FR+M  +   PN VT+
Sbjct: 205 ELDAARVLFDGMEERDGV-----CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTV 259

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
           LSVL AC  L A    + +H  +    ++ ++ V  +L+D Y+K G++  +R +FD +  
Sbjct: 260 LSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDD 319

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           KD++ WNS+I GY +HGF   AL LF  M   GL P   TF+ I+ A   +G V  G  +
Sbjct: 320 KDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDI 379

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           F  + + Y I P IEHY  M++L GR+G +E+A E +++M IEPD  +W  LL ACR+HG
Sbjct: 380 FNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHG 439

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
            I L    +E L D    +     L+  IYA  G  +   ++R + +++  +   G   I
Sbjct: 440 KIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSI 499

Query: 744 EVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGI 798
           EV N V+ F+ GG +      +Y  L+ +         T ++      I E EKE    +
Sbjct: 500 EVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEV 559

Query: 799 HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
           HSEKLA+AF LI ++Q   TI+IVKN+R+C  CHE  K +S +   +I + D    HHF 
Sbjct: 560 HSEKLAIAFGLI-NTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFV 618

Query: 859 NGQCSCGDYW 868
           NG CSCGDYW
Sbjct: 619 NGSCSCGDYW 628



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 189/415 (45%), Gaps = 46/415 (11%)

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
           KL   YA  G LD +  +F   +  +++ W+A+I  ++      + +  +  M+  G+ P
Sbjct: 67  KLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEP 126

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           + F F  IL+ C      E GK +HS  +KLG      VR  +L VY + G ++ A++ F
Sbjct: 127 NAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLF 182

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           ++M EK                                    +V+   ++  Y + G+ D
Sbjct: 183 DTMPEKS-----------------------------------LVSLTAMLTCYAKHGELD 207

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            A  +   ME      D   W  MI G+ QNG  ++AL LF+ M      PN VT+ S +
Sbjct: 208 AARVLFDGMEE----RDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVL 263

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
           SAC  L AL  G  +HS     G   +V VG +L++MYSKC  LE A  VFD I DKDV 
Sbjct: 264 SACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVV 323

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           +WNSMI GY   G+  +A +LF  M    + P  IT+  ++S    +G   E  D+F +M
Sbjct: 324 AWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKM 383

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                ++     +  ++    + G    A  + + M      P+ V   ++L AC
Sbjct: 384 KDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMN---IEPDPVLWGTLLGAC 435



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 183/394 (46%), Gaps = 45/394 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           G   +A+     + TQG +    T+ ++L+ C     I   + LH+  + L  + D++V+
Sbjct: 107 GLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVR 162

Query: 95  TKLLSVYA-------------------------------KCGCLDDAREVFEDMRERNLY 123
           T LL VYA                               K G LD AR +F+ M ER+  
Sbjct: 163 TGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGV 222

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
            W+ MI  Y+++    E + LF  M++    P++     +L ACG  G  E+G+ +HS +
Sbjct: 223 CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 282

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
              G+     V  +++ +Y KCG L  AR  F+ +D+KD VAWNSMI GY   G + EA 
Sbjct: 283 ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEAL 342

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISG 302
           +LF  MCR  +    +TF  ++ +    G      ++  +M +  GI P +  + CM++ 
Sbjct: 343 QLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNL 402

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
             + G   QA +L K M+   + P+ V   + + AC     +A+G +I  L V     + 
Sbjct: 403 LGRAGHVEQAYELVKNMN---IEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANS 459

Query: 363 VLVGNSLI--NMYSKCEELEAAERVFDMIKDKDV 394
              G  ++  N+Y+     +   R+  M+KD  V
Sbjct: 460 ---GTYILLSNIYAAVGNWDGVARLRTMMKDSGV 490



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 128/267 (47%), Gaps = 4/267 (1%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVT 87
           +D    NG  NEA+ +   +    AK    T +++L AC    ++   R +H+++ N   
Sbjct: 228 IDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGI 287

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + +V V T L+ +Y+KCG L+DAR VF+ + ++++  W++MI  Y+     +E ++LF  
Sbjct: 288 QFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKS 347

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M + GL P +  F  IL ACG+ G    G  + + +  + G+         ++ +  + G
Sbjct: 348 MCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAG 407

Query: 207 KLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            +  A    ++M+ E D V W +++      G+     ++ + +  + +     T+ +L 
Sbjct: 408 HVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLA-NSGTYILLS 466

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPD 292
             Y  +G  D    +   M+  G+  +
Sbjct: 467 NIYAAVGNWDGVARLRTMMKDSGVKKE 493



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 104/228 (45%), Gaps = 32/228 (14%)

Query: 521 EIHGCVLRRSLESSLPVMN-SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
           +IH  + R  L+   P++N  L  +YA  G + YS  +F    +  +  W ++I G+ L 
Sbjct: 48  QIHAVLFRHGLDHH-PILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALR 106

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSII---------LAHSLAGMVDLGKKVFCSITEC 630
           G    AL+ + QM + G++PN  TF SI+           HS A  +     ++      
Sbjct: 107 GLHEQALNFYAQMLTQGVEPNAFTFSSILKLCPIEPGKALHSQAVKLGFDSDLYVR---- 162

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
                     + ++D+Y R G +  A +  + MP +   S+  A+LT    HG +D A +
Sbjct: 163 ----------TGLLDVYARGGDVVSAQQLFDTMPEKSLVSL-TAMLTCYAKHGELDAARV 211

Query: 691 AIERLFD-LEPGDVLIQRLILQIYAICGKPEDALKV-RKLERENTRRN 736
               LFD +E  D +   +++  Y   G P +AL + R++ +   + N
Sbjct: 212 ----LFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPN 255


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  348 bits (893), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 218/766 (28%), Positives = 385/766 (50%), Gaps = 66/766 (8%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           LLQ    S+ ++ A K+    + + + DV     L+  YA  G +  A+ +F+ M ER++
Sbjct: 47  LLQFYCKSSKMNYAFKV---FDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDV 103

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            +W++++  Y  +   R+ +E+F  M    +  D   F  IL+AC    D+  G  +H L
Sbjct: 104 VSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCL 163

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
            I++G        ++++ +Y KC KL  A R F  M E++ V W+++I+GY Q     E 
Sbjct: 164 AIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEG 223

Query: 243 HRLFDKMCREEIKLGVVTFNILIRS-----------------------YNQL-------- 271
            +LF  M +  + +   T+  + RS                       Y+ +        
Sbjct: 224 LKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDM 283

Query: 272 -GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
             +C+   +  K   +L   P   ++  +I G+A+  +  +ALD+F+ +    +  + ++
Sbjct: 284 YAKCERMFDAWKVFNTLP-NPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEIS 342

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
           ++ A++AC+ +K    G+++H LAVK G   ++ V N++++MY KC  L  A  +F+ ++
Sbjct: 343 LSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEME 402

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-----YIQNGNE 445
            +D  SWN++IA + Q     K   LF+ M  S + P+  T+  ++        +  G E
Sbjct: 403 RRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTE 462

Query: 446 -----------------DEAVDLFQRMG---KNDKV-----KRNTASWNSLIAGYQQLGQ 480
                               VD++ + G   + +K+     ++ T SWNS+I+G+    Q
Sbjct: 463 IHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQ 522

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
             NA   F +M      P+  T  +VL  CA +      K+IH  +L+  L S + + ++
Sbjct: 523 SENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIAST 582

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           L+D Y+K GN+  SR +F+    +D +TW+++IC Y  HG    A++LF++M+   +KPN
Sbjct: 583 LVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPN 642

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
              F+S++ A +  G VD G   F  +   Y + P +EHYS M+DL GRSG++ EA++ I
Sbjct: 643 HTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLI 702

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
           E MP E D  IW  LL+ C++ GN+++A  A   L  L+P D     L+  +YAI G   
Sbjct: 703 ESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWG 762

Query: 721 DALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
           +  K+R + +    +   G  WIEV++ V+TF+ G  +   S+ +Y
Sbjct: 763 EVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIY 808



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 149/633 (23%), Positives = 277/633 (43%), Gaps = 115/633 (18%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           F  ILQ C N      GK +H+ +I  G      V N +L  Y K  K+ +A + F+ M 
Sbjct: 9   FSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRMP 68

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
           ++D ++WN++I GY  IG    A  LFD M   +    VV++N L+  Y   G    ++E
Sbjct: 69  QRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERD----VVSWNSLLSCYLHNGVNRKSIE 124

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           +  RM SL I  D  T+  +                                   + AC+
Sbjct: 125 IFVRMRSLKIPHDYATFAVI-----------------------------------LKACS 149

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
            ++   +G+++H LA++MGF +DV+ G++L++MYSKC++L+ A RVF  + ++++  W++
Sbjct: 150 GIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSA 209

Query: 400 MIAGYCQAGYCGKAYELFIKM-----------------------------------QESD 424
           +IAGY Q     +  +LF  M                                    +SD
Sbjct: 210 VIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSD 269

Query: 425 VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
              + I     +  Y +     +A  +F  +    +      S+N++I GY +  Q   A
Sbjct: 270 FAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPR-----QSYNAIIVGYARQDQGLKA 324

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           L +F+ +Q +    + +++   L AC+ +    +  ++HG  ++  L  ++ V N+++D 
Sbjct: 325 LDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDM 384

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           Y K G ++ +  IF+ M  +D ++WN++I  +  +      L LF  M    ++P+  T+
Sbjct: 385 YGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTY 444

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEF----- 659
            S++ A +    ++ G ++   I +    +      SA++D+YG+ G L EA +      
Sbjct: 445 GSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVG-SALVDMYGKCGMLMEAEKIHARLE 503

Query: 660 -----------------------------IEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
                                        + +M I PD+  +  +L  C     I+L   
Sbjct: 504 EKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQ 563

Query: 691 AIERLFDLE-PGDVLIQRLILQIYAICGKPEDA 722
              ++  L+   DV I   ++ +Y+ CG  +D+
Sbjct: 564 IHAQILKLQLHSDVYIASTLVDMYSKCGNMQDS 596



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 160/343 (46%), Gaps = 43/343 (12%)

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
           +T +  +  C++LKAL  G ++H+  +  GF   + V N L+  Y K  ++  A +VFD 
Sbjct: 7   LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           +  +DV SWN++I GY   G  G A  LF  M E D    V++WN L+S Y+ NG   ++
Sbjct: 67  MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERD----VVSWNSLLSCYLHNGVNRKS 122

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
           +++F RM ++ K+  + A                                   T   +L 
Sbjct: 123 IEIFVRM-RSLKIPHDYA-----------------------------------TFAVILK 146

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT 568
           AC+ +       ++H   ++   E+ +   ++L+D Y+K   +  +  +F  M  ++++ 
Sbjct: 147 ACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVC 206

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC-SI 627
           W+++I GYV +  +   L LF  M   G+  ++ T+ S+  + +      LG ++   ++
Sbjct: 207 WSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHAL 266

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSS 670
              +    +I   +A +D+Y +  ++ +A +    +P  P  S
Sbjct: 267 KSDFAYDSIIG--TATLDMYAKCERMFDAWKVFNTLPNPPRQS 307


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  348 bits (893), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 201/578 (34%), Positives = 314/578 (54%), Gaps = 38/578 (6%)

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P     +  ++ CT L+ L  G  IH+      F DD+++ N ++NMY+KC  LE A+ +
Sbjct: 103 PERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDL 162

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-------- 437
           FD +  KD+ SW  +I+GY Q+G   +A  LF KM      PN  T + L+         
Sbjct: 163 FDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSD 222

Query: 438 -------------GYIQNGNEDEAV-DLFQRMGK--------NDKVKRNTASWNSLIAGY 475
                        GY  N +   ++ D++ R           N    +N  SWN+LIAG+
Sbjct: 223 HHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGH 282

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
            + G+  + + +F +M    F P   T  SVL ACA   +  + K +H  V++   +   
Sbjct: 283 ARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHVIKSGGQPIA 341

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            + N+LID YAKSG+I  ++ +F  +  +DI++WNS+I GY  HG    AL LF+QM   
Sbjct: 342 YIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKA 401

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
            ++PN  TFLS++ A S +G++D G+  F  + + ++I   + H+  ++DL GR+G+L E
Sbjct: 402 KVQPNEITFLSVLTACSHSGLLDEGQYYF-ELMKKHKIEAQVAHHVTVVDLLGRAGRLNE 460

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A +FIE+MPI+P +++W ALL ACR+H N+DL V A E++F+L+P D     L+  IYA 
Sbjct: 461 ANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIYAS 520

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN 775
            G+  DA KVRK+ +E+  +      W+E++N V+ FV    S    + +    + +   
Sbjct: 521 AGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVANDDSHPMREEIQRMWEKISGK 580

Query: 776 V-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
           +        +SH    + ++++E     HSEKLALAFA++ +     TIRI KNIR+C  
Sbjct: 581 IKEIGYVPDTSHVLFFMNQQDRELKLQYHSEKLALAFAVLKTPPGL-TIRIKKNIRICGD 639

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   K+ S +   EI + D+   HHF +G CSC DYW
Sbjct: 640 CHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 211/467 (45%), Gaps = 49/467 (10%)

Query: 42  ITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSV 100
           + VLD I     +  R  Y  +L  C     +   R +HA +   T E D+ +   +L++
Sbjct: 90  LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149

Query: 101 YAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLF 160
           YAKCG L++A+++F+ M  +++ +W+ +I  YS+  +  E + LF  M+  G  P++F  
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209

Query: 161 PKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE 220
             +L+A G       G+ +H+  +K G      V +S+L +Y +   +  A+  F S+  
Sbjct: 210 SSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAA 269

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------- 261
           K+ V+WN++I+G+ + GE +   RLF +M R+  +    T+                   
Sbjct: 270 KNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASSGSLEQGKWVH 329

Query: 262 ---------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN 306
                          N LI  Y + G    A ++ +R+    +  D+ +W  +ISG+AQ+
Sbjct: 330 AHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRL----VKQDIVSWNSIISGYAQH 385

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           G  ++AL LF++M    V PN +T  S ++AC+    L  G     L  K      V   
Sbjct: 386 GLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHH 445

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ----AGYCGKAYELFIKMQE 422
            +++++  +   L  A +  + +  K   +    + G C+          A E   ++  
Sbjct: 446 VTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDP 505

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
            D  P+V+  N+    Y   G   +A  + ++M K   VK+  A SW
Sbjct: 506 HDSGPHVLLSNI----YASAGRLSDAAKV-RKMMKESGVKKEPACSW 547


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  348 bits (892), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 229/766 (29%), Positives = 380/766 (49%), Gaps = 73/766 (9%)

Query: 171 GDFEAGKLMHSLVIK---LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE-KDGVAW 226
           GD   G+ +H  +++   L    V  V NS+L +Y +CG +  AR  F+ M   +D V+W
Sbjct: 62  GDLRLGRALHRRLLRGDLLDRDAV--VANSLLTLYSRCGAVASARNVFDGMRGLRDIVSW 119

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-----------------NILIRSYN 269
            +M S   + G    +  L  +M    +     T                   +++   +
Sbjct: 120 TAMASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVH 179

Query: 270 QLG--QCDVA-----MEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQAL 313
           ++G    DVA     ++M+ R   L     VF          WT +IS + Q     +A+
Sbjct: 180 KMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAV 239

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
           +LF +    G  P+  T++S ISACT+L ++ +G+++HSLA++MG   D  V   L++MY
Sbjct: 240 ELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMY 299

Query: 374 SKC---EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC-GKAYELFIKMQESDVPPNV 429
           +K    + ++ A +VF+ +   DV SW ++I+GY Q+G    K   LF +M    + PN 
Sbjct: 300 AKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNH 359

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
           IT++ ++       + D    +   + K+++   +T   N+L++ Y + G    A  VF 
Sbjct: 360 ITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVG-NALVSMYAESGCMEEARRVFN 418

Query: 490 KMQSSCFYPNCVT----------------------ILSVLPACAYLVASNKVKEIHGCVL 527
           ++      P C+T                        S++ A A +    K +++H   L
Sbjct: 419 QLYERSMIP-CITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSL 477

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           +    S   V NSL+  Y++ G +  +   F+ +  +++I+W S+I G   HG+   AL 
Sbjct: 478 KAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALS 537

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           LF  M   G+KPN  T+++++ A S  G+V  GK+ F S+   + +IP +EHY+ M+DL 
Sbjct: 538 LFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLL 597

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
            RSG ++EA+EFI +MP++ D+ +W+ LL ACR H NI++  +  + + +LEP D     
Sbjct: 598 ARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYV 657

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
           L+  +YA  G  ++  ++R   R+N      G  W+EV+N  + F  G  S   +  +Y 
Sbjct: 658 LLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPRAQDIYG 717

Query: 768 WLQNVPENVTARSSHSGLCI-----EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
            L  +   +          I      +E KE+    HSEK+A+AF LI +S AP  IRI 
Sbjct: 718 KLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTS-APKPIRIF 776

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN+R+C  CH   KY+S     EI L DS   H  K+G+CSCG+YW
Sbjct: 777 KNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 198/394 (50%), Gaps = 25/394 (6%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DV V + L+ + A+ G L  AR+VF+ + E+ +  W+ +I  Y + +   E VELF   +
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG--- 206
           +DG  PD +    ++ AC   G    G  +HSL +++G++    V   ++ +Y K     
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSNIGQ 306

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIG-ENDEAHRLFDKMCREEIKLGVVTFNILI 265
            + +A + FE M + D ++W ++ISGY Q G + ++   LF +M  E IK   +T++ ++
Sbjct: 307 AMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSIL 366

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
           +S   +   D   ++   +              ++S +A++G   +A  +F ++    ++
Sbjct: 367 KSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMI 426

Query: 326 P---------------------NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           P                     +  T  S ISA   +  L  G ++H++++K GF  D  
Sbjct: 427 PCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRF 486

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
           V NSL++MYS+C  LE A R F+ +KD++V SW SMI+G  + GY  +A  LF  M  + 
Sbjct: 487 VSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTG 546

Query: 425 VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           V PN +T+  ++S     G   E  + F+ M ++
Sbjct: 547 VKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRD 580



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 138/570 (24%), Positives = 250/570 (43%), Gaps = 76/570 (13%)

Query: 73  IHLARKLHAFL--NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMI 129
           + L R LH  L    + + D  V   LL++Y++CG +  AR VF+ MR  R++ +W+AM 
Sbjct: 64  LRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMA 123

Query: 130 GAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGM 188
              +R+   R  + L   M++ GL P+ +       AC     +   G ++  LV K+G+
Sbjct: 124 SCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGL 183

Query: 189 -SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
                 V ++++ +  + G L  AR+ F+ + EK  V W  +IS Y Q    +EA  LF 
Sbjct: 184 WGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFL 243

Query: 248 KMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP---------------- 291
               +  +    T + +I +  +LG   + +++      +G+                  
Sbjct: 244 DFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKSN 303

Query: 292 ------------------DVFTWTCMISGFAQNG-RTSQALDLFKEMSFVGVMPNGVTIT 332
                             DV +WT +ISG+ Q+G + ++ + LF EM    + PN +T +
Sbjct: 304 IGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYS 363

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           S + +C  +     G ++H+  +K        VGN+L++MY++   +E A RVF+ + ++
Sbjct: 364 SILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYER 423

Query: 393 DVY-------------------------SWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
            +                          ++ S+I+     G   K  +L     ++    
Sbjct: 424 SMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGS 483

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           +    N L+S Y + G  ++A   F     N+   RN  SW S+I+G  + G    AL +
Sbjct: 484 DRFVSNSLVSMYSRCGYLEDACRSF-----NELKDRNVISWTSMISGLAKHGYAERALSL 538

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS---LIDT 544
           F  M  +   PN VT ++VL AC+++    + KE    + R      +P M     ++D 
Sbjct: 539 FHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRD--HGLIPRMEHYACMVDL 596

Query: 545 YAKSGNIVYSRTIFDGMSSK-DIITWNSLI 573
            A+SG +  +    + M  K D + W +L+
Sbjct: 597 LARSGIVKEALEFINEMPLKADALVWKTLL 626



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 110/465 (23%), Positives = 208/465 (44%), Gaps = 45/465 (9%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLL 98
           EA+ +       G +  R T  +++ AC +  S+ L  +LH+  L +    D  V   L+
Sbjct: 237 EAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLV 296

Query: 99  SVYAKCG---CLDDAREVFEDMRERNLYTWSAMIGAYSRDQ-RWREVVELFFLMVQDGLF 154
            +YAK      +D A +VFE M + ++ +W+A+I  Y +   +  +V+ LF  M+ + + 
Sbjct: 297 DMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIK 356

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+   +  IL++C +  D ++G+ +H+ VIK   +    V N+++++Y + G +  ARR 
Sbjct: 357 PNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRV 416

Query: 215 FESMDEKDGV-------------------------AWNSMISGYFQIGENDEAHRLFDKM 249
           F  + E+  +                          + S+IS    +G   +  +L    
Sbjct: 417 FNQLYERSMIPCITEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMS 476

Query: 250 CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT 309
            +          N L+  Y++ G  + A      ++      +V +WT MISG A++G  
Sbjct: 477 LKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKD----RNVISWTSMISGLAKHGYA 532

Query: 310 SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFTDDVLVGNS 368
            +AL LF +M   GV PN VT  + +SAC+ +  +  G E   S+    G    +     
Sbjct: 533 ERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYAC 592

Query: 369 LINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL----FIKMQES 423
           ++++ ++   + EA E + +M    D   W +++ G C++    +  E+     ++++  
Sbjct: 593 MVDLLARSGIVKEALEFINEMPLKADALVWKTLL-GACRSHDNIEVGEITAKNVVELEPR 651

Query: 424 DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           D  P V+  N+    Y   G  DE   +   M  N+  K    SW
Sbjct: 652 DPAPYVLLSNL----YADAGLWDEVARIRSAMRDNNLNKETGLSW 692



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 135/285 (47%), Gaps = 12/285 (4%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF-VKTKL 97
           N+ + +   +  +  K    TY ++L++C   +     R++HA +    +     V   L
Sbjct: 341 NKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNAL 400

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           +S+YA+ GC+++AR VF  + ER++         +  D R          +V+  +    
Sbjct: 401 VSMYAESGCMEEARRVFNQLYERSMIPCITEGRDFPLDHR----------IVRMDVGISS 450

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
             F  ++ A  + G    G+ +H++ +K G    R V NS++++Y +CG L  A R F  
Sbjct: 451 STFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNE 510

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
           + +++ ++W SMISG  + G  + A  LF  M    +K   VT+  ++ + + +G     
Sbjct: 511 LKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREG 570

Query: 278 MEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
            E  + M+   G+ P +  + CM+   A++G   +AL+   EM  
Sbjct: 571 KEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEFINEMPL 615


>gi|15220808|ref|NP_173207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75175206|sp|Q9LNP2.1|PPR47_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g17630
 gi|8778465|gb|AAF79473.1|AC022492_17 F1L3.33 [Arabidopsis thaliana]
 gi|332191495|gb|AEE29616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 731

 Score =  348 bits (892), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 219/706 (31%), Positives = 361/706 (51%), Gaps = 79/706 (11%)

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRE---RNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           +   L+SVYA+ G L DAR VFE +      +L  W++++ A      +   +EL+  M 
Sbjct: 91  LAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMR 150

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           Q GL  D ++ P IL+AC   G F   +  H+ VI++G+     V N +L +Y K G++ 
Sbjct: 151 QRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMG 210

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A   F  M  ++ ++WN MI G+ Q  + + A ++F+ M REE K              
Sbjct: 211 DAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFK-------------- 256

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
                                PD  TWT ++S  +Q G+    L  F  M   G   +G 
Sbjct: 257 ---------------------PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGE 295

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
            +    S C +L+AL++  ++H   +K GF + +   N+LI++Y K  +++ AE +F  I
Sbjct: 296 ALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQI 355

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE----SDVPPNVITWNVLISGYIQNGNE 445
           ++K + SWNS+I  +  AG   +A  LF +++E     +V  NV+TW  +I G    G  
Sbjct: 356 RNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRG 415

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           D++++                                     FR+MQ S    N VTI  
Sbjct: 416 DDSLE------------------------------------YFRQMQFSKVLANSVTICC 439

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           +L  CA L A N  +EIHG V+R S+  ++ V N+L++ YAK G +     +F+ +  KD
Sbjct: 440 ILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKD 499

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
           +I+WNS+I GY +HGF   AL +FD+M S G  P+    ++++ A S AG+V+ G+++F 
Sbjct: 500 LISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFY 559

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
           S+++ + + P  EHY+ ++DL GR G L+EA E +++MP+EP   +  ALL +CR+H N+
Sbjct: 560 SMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNV 619

Query: 686 DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV 745
           D+A     +L  LEP       L+  IY+  G+ E++  VR L ++   +   G  WIEV
Sbjct: 620 DIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEV 679

Query: 746 KNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS-SHSGLCIEEE 790
           K   Y F +G   +S  + +Y  L+++  ++  +  +H G   E++
Sbjct: 680 KKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHDGNNYEDD 725


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 221/777 (28%), Positives = 372/777 (47%), Gaps = 86/777 (11%)

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVR-RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
            C     GKL+HS +           + +S++ +Y++CG L  A   F  +  K  V W 
Sbjct: 38  ECNSIARGKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLESAIDVFHKIAHKSIVLWT 97

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------------------------- 261
            +IS Y   G +  A  LF ++ +E I L  + F                          
Sbjct: 98  VLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEA 157

Query: 262 ---------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
                    + L+  Y + G    A  +   +E      DV  W  MI+  +QNG   +A
Sbjct: 158 GLGLQEIVASALVSMYGRCGSLRDANALFGHLER---HLDVVLWNAMITANSQNGSPREA 214

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM--EIHSLAVKMGFTDDVLVGNSLI 370
           L++F  M  +G+ P+ VT  S   AC+   +L        H+   + G   DV+V  +L+
Sbjct: 215 LEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALV 274

Query: 371 NMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM---------- 420
           N Y++C E++ A   F  + +++  SW SMIA + Q G+   A E F  M          
Sbjct: 275 NAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHL-LAVETFHAMLLEGVVPTRS 333

Query: 421 ----------------------QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
                                 QE  V  +V     L+  Y +   +++A+ +F      
Sbjct: 334 TLFAALEGCEDLHTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFS---AR 390

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
           ++ + + A   ++IA Y Q   + +   ++         P+ +  ++ L ACA L A ++
Sbjct: 391 EEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSE 450

Query: 519 VKEIHGCVLR-RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
            ++IH CV   R L+  + + N+++  Y + G++  +R  FDGM ++D I+WN+++    
Sbjct: 451 GRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASA 510

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
            HG      DLF  M   G    R  FL+++ A + AG+V+ G + F ++T  + ++P  
Sbjct: 511 QHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPAT 570

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
           EHY  M+DL GR G+L +A   ++ MP+ PD++ W AL+ ACRI+G+ +    A ER+ +
Sbjct: 571 EHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLE 630

Query: 698 LEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGW 757
           L          +  IY+  G+ EDA  VRK+  +   R   G   IE+++ V+ FV    
Sbjct: 631 LRANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDR 690

Query: 758 SESYSDLLYSWLQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLALAFALIG 811
           S   S+ +Y+ L+ V   +  R+ +  +       +EEE+KE++   HSEKLA+AF ++ 
Sbjct: 691 SHPQSEAIYAELERVMGAIE-RAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMS 749

Query: 812 SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           + Q   T+R++KN+R+CV CH  +K++S +   EI + D +  HHFK+G CSCGDYW
Sbjct: 750 TPQGS-TLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 146/606 (24%), Positives = 257/606 (42%), Gaps = 108/606 (17%)

Query: 61  INLLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           + L++ C   NSI   + LH+ ++    +  D ++ + L+ +Y +CG L+ A +VF  + 
Sbjct: 33  VRLVREC---NSIARGKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLESAIDVFHKIA 89

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
            +++  W+ +I AY         + LF  ++Q+G+  D  +F  +L AC +     AG+L
Sbjct: 90  HKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRL 149

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK-DGVAWNSMISGYFQIG 237
           +H   ++ G+     V ++++++Y +CG L  A   F  ++   D V WN+MI+   Q G
Sbjct: 150 IHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNG 209

Query: 238 ENDEAHRLFDKM-----------------------------------CREEIKLG--VVT 260
              EA  +F +M                                   C +E  LG  VV 
Sbjct: 210 SPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVV 269

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
              L+ +Y + G+ D A E    M       +  +WT MI+ FAQ G    A++ F  M 
Sbjct: 270 ATALVNAYARCGEIDCAREFFAAMPE----RNAVSWTSMIAAFAQIGHL-LAVETFHAML 324

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
             GV+P   T+ +A+  C DL    +   + ++A ++G   DV +   L+  Y++C+  E
Sbjct: 325 LEGVVPTRSTLFAALEGCEDLHTARL---VEAIAQEIGVATDVAIVTDLVMAYARCDGQE 381

Query: 381 AAERVFDMIKDK--DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------ 432
            A RVF   ++   D     +MIA Y Q       ++L+    E  + P+ I +      
Sbjct: 382 DAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDA 441

Query: 433 ------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                         N ++S Y Q G+  +A D F  M   D++ 
Sbjct: 442 CASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEI- 500

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY--LVAS---- 516
               SWN++++   Q G+  +   +FR M    F    V  L++L ACA+  LV +    
Sbjct: 501 ----SWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEH 556

Query: 517 -NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLIC 574
            + +   HG V       +      ++D   + G +  +  I   M    D  TW +L+ 
Sbjct: 557 FSAMTGDHGVV------PATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMG 610

Query: 575 GYVLHG 580
              ++G
Sbjct: 611 ACRIYG 616



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 138/308 (44%), Gaps = 21/308 (6%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTKLLS 99
           A+    ++  +G    R+T    L+ C D   +H AR + A    +    DV + T L+ 
Sbjct: 316 AVETFHAMLLEGVVPTRSTLFAALEGCED---LHTARLVEAIAQEIGVATDVAIVTDLVM 372

Query: 100 VYAKCGCLDDAREVFEDMRER--NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
            YA+C   +DA  VF    E   +    +AMI  Y++ +  R   +L+   ++ G+ PD 
Sbjct: 373 AYARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDR 432

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR------NSVLAVYVKCGKLIWA 211
            L+   L AC +      G+ +H+ V     +  RR+       N+++++Y +CG L  A
Sbjct: 433 ILYITALDACASLAALSEGRQIHACV-----AADRRLDRDVTLGNAIVSMYGQCGSLRDA 487

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R  F+ M  +D ++WN+M+S   Q G  ++   LF  M +E      V F  L+ +    
Sbjct: 488 RDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHA 547

Query: 272 GQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  +   E    M    G+ P    + CM+    + GR + A  + + M    V P+  T
Sbjct: 548 GLVEAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMP---VPPDAAT 604

Query: 331 ITSAISAC 338
             + + AC
Sbjct: 605 WMALMGAC 612



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 111/503 (22%), Positives = 193/503 (38%), Gaps = 94/503 (18%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI----D 90
           NG   EA+ +   +   G      T++++ +AC  S S+  A ++  F   + E     D
Sbjct: 208 NGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLR-ASQVKGFHTCLDETGLGSD 266

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           V V T L++ YA+CG +D ARE F  M ERN  +W++MI A+++       VE F  M+ 
Sbjct: 267 VVVATALVNAYARCGEIDCAREFFAAMPERNAVSWTSMIAAFAQIGHLL-AVETFHAMLL 325

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           +G+ P       +  A   C D    +L+ ++  ++G++    +   ++  Y +C     
Sbjct: 326 EGVVPTR---STLFAALEGCEDLHTARLVEAIAQEIGVATDVAIVTDLVMAYARCDGQED 382

Query: 211 ARRFFESMDEK--DGVAWNSMISGYFQIGENDEAHRLF---------------------- 246
           A R F + +E   D     +MI+ Y Q  +     +L+                      
Sbjct: 383 AIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDAC 442

Query: 247 ------------------DKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
                             D+    ++ LG    N ++  Y Q G    A +    M +  
Sbjct: 443 ASLAALSEGRQIHACVAADRRLDRDVTLG----NAIVSMYGQCGSLRDARDAFDGMPA-- 496

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
              D  +W  M+S  AQ+GR     DLF+ M   G     V   + +SAC          
Sbjct: 497 --RDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACA--------- 545

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
             H+  V+ G                 CE   A      ++   + Y    M+    + G
Sbjct: 546 --HAGLVEAG-----------------CEHFSAMTGDHGVVPATEHY--GCMVDLLGRKG 584

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
               A+ +   +Q   VPP+  TW  L+      G+ +      +R+   +    +TA++
Sbjct: 585 RLADAHGI---VQAMPVPPDAATWMALMGACRIYGDTERGRFAAERV--LELRANHTAAY 639

Query: 469 NSLIAGYQQLGQKNNALGVFRKM 491
            +L   Y   G+  +A  V + M
Sbjct: 640 VALCNIYSAAGRWEDAAAVRKIM 662


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 220/651 (33%), Positives = 332/651 (50%), Gaps = 79/651 (12%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++  W  M  G A +     AL L+  M  +G++PN  T    + +C   KA   G +I
Sbjct: 51  PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQI 110

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM---------------------- 388
           H   +K+G+  D+ V  SLI+MY +   LE A +VFD                       
Sbjct: 111 HGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYI 170

Query: 389 ---------IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN----------- 428
                    I  KDV SWN+MI+GY + G   +A ELF +M +++V P+           
Sbjct: 171 ASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC 230

Query: 429 -----------VITW-------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                      V +W             N LI  YI+ G  + A  LF+ +   D +   
Sbjct: 231 AQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVI--- 287

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             SWN+LI GY  +     AL +F++M  S   PN VT+LS+LPACA+L A    + IH 
Sbjct: 288 --SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHV 345

Query: 525 CVLRR--SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
            + +R   + ++     SLID YAK G+I  ++ +FD + ++ + +WN++I G+ +HG  
Sbjct: 346 YINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRA 405

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
           +AA D+F +M+   ++P+  TF+ ++ A S +GM+DLG+ +F S+ E Y+I P +EHY  
Sbjct: 406 NAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGC 465

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           MIDL G SG  +EA E I  M +EPD  IW +LL AC++HGN++L     + L  +EP +
Sbjct: 466 MIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKN 525

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGW----- 757
                L+  IYA  G+  +  K+R L  +   +   G   IE+ ++V+ F+ G       
Sbjct: 526 PGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 585

Query: 758 SESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
            E Y  L    +          +S     +EEE KE     HSEKLA+AF LI S++   
Sbjct: 586 REIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI-STKPGT 644

Query: 818 TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            + IVKN+R+C +CHE  K +S ++  EI   D    HHF++G CSC DYW
Sbjct: 645 KLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 695



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 214/472 (45%), Gaps = 75/472 (15%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           L  A  VFE ++E NL  W+ M   ++        + L+  M+  GL P+ + FP +L++
Sbjct: 38  LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKS 97

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C     F  G+ +H  V+KLG      V  S++++YV+ G+L  AR+ F+    +D V++
Sbjct: 98  CAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSY 157

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
            ++I+GY   G    A ++FD++  ++    VV++N +I  Y + G    A+E+ K M  
Sbjct: 158 TALITGYASKGYIASAQKMFDEIPIKD----VVSWNAMISGYAETGNNKEALELFKEMMK 213

Query: 287 LGITPDVFTWTCMIS---------------------GFAQN--------------GRTSQ 311
             + PD  T   ++S                     GF  N              G    
Sbjct: 214 TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 273

Query: 312 ALDLFKEMSFVGVM-------------------------------PNGVTITSAISACTD 340
           A  LF+ +S+  V+                               PN VT+ S + AC  
Sbjct: 274 ACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAH 333

Query: 341 LKALAMGMEIHSLAVK--MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN 398
           L A+ +G  IH    K   G  +      SLI+MY+KC ++EAA++VFD I ++ + SWN
Sbjct: 334 LGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWN 393

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           +MI G+   G    A+++F +M+++++ P+ IT+  L+S    +G  D    +F+ M ++
Sbjct: 394 AMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKED 453

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            K+      +  +I      G    A  +   M+     P+ V   S+L AC
Sbjct: 454 YKITPKLEHYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKAC 502



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 159/307 (51%), Gaps = 7/307 (2%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           G   EA+ +   +     +   +T ++++ AC  S SI L R++H+++ +     ++ + 
Sbjct: 199 GNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIV 258

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+ +Y KCG ++ A  +FE +  +++ +W+ +IG Y+    ++E + LF  M++ G  
Sbjct: 259 NALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 318

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKL--GMSCVRRVRNSVLAVYVKCGKLIWAR 212
           P+D     IL AC + G  E G+ +H  + K   G++     R S++ +Y KCG +  A+
Sbjct: 319 PNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQ 378

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + F+S+  +   +WN+MI G+   G  + A  +F +M + EI+   +TF  L+ + +  G
Sbjct: 379 QVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSG 438

Query: 273 QCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
             D+   + + M E   ITP +  + CMI     +G   +A ++   M    + P+GV  
Sbjct: 439 MLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIW 495

Query: 332 TSAISAC 338
            S + AC
Sbjct: 496 CSLLKAC 502



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 115/483 (23%), Positives = 209/483 (43%), Gaps = 76/483 (15%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  LL++C  S +    +++H   L L  ++D++V T L+S+Y + G L+DAR+VF+  
Sbjct: 90  TFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQS 149

Query: 118 RERNL--YT-----------------------------WSAMIGAYSRDQRWREVVELFF 146
             R++  YT                             W+AMI  Y+     +E +ELF 
Sbjct: 150 SHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFK 209

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M++  + PD+     ++ AC      E G+ +HS +   G     ++ N+++ +Y+KCG
Sbjct: 210 EMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 269

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           ++  A   FE +  KD ++WN++I GY  +    EA  LF +M R       VT   ++ 
Sbjct: 270 EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILP 329

Query: 267 SYNQLGQCDVA------------------------MEMVKRMESLGITPDVF-------- 294
           +   LG  ++                         ++M  +   +     VF        
Sbjct: 330 ACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSL 389

Query: 295 -TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HS 352
            +W  MI GFA +GR + A D+F  M    + P+ +T    +SAC+    L +G  I  S
Sbjct: 390 SSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRS 449

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAGYCQAGYC- 410
           +      T  +     +I++       + AE + + ++ + D   W S++      G   
Sbjct: 450 MKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVE 509

Query: 411 -GKAY-ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
            G++Y +  IK++    P N  ++ +L + Y   G  +E   +  R   NDK  +     
Sbjct: 510 LGESYAQNLIKIE----PKNPGSYVLLSNIYATAGRWNEVAKI--RALLNDKGMKKVPGC 563

Query: 469 NSL 471
           +S+
Sbjct: 564 SSI 566


>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 907

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 229/711 (32%), Positives = 364/711 (51%), Gaps = 67/711 (9%)

Query: 70  SNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMI 129
           SN IH   K HA  N            +++V+AK G + DAR++F+ M +RNL +W+ MI
Sbjct: 41  SNVIH---KNHATYN-----------SMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMI 86

Query: 130 GAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI-KLGM 188
             Y  +    E  +LF LM +     D+F +  ++      G  E  + +  LV  KL  
Sbjct: 87  AGYLHNNMVEEAHKLFDLMAER----DNFSWALMITCYTRKGMLEKARELFELVPDKLDT 142

Query: 189 SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
           +C     N+++A Y K G+   A + FE M  KD V++NSM++GY Q G+   A + F++
Sbjct: 143 ACW----NAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFER 198

Query: 249 MCREEIKLGVVTFNILIRSYNQLGQCDV--AMEMVKRMESLGITPDVFTWTCMISGFAQN 306
           M        VV++N+++  +  +  CD+  A E+ +++      P+  +W  M+ GFA++
Sbjct: 199 MAERN----VVSWNLMVAGF--VNNCDLGSAWELFEKIPD----PNAVSWVTMLCGFARH 248

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH-----------SLAV 355
           G+  +A  LF  M    V+     I + +      +A+ +  E             +  V
Sbjct: 249 GKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYV 308

Query: 356 KMGFTD------------DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           ++G  D            DV    +L++   +   ++ A +VF  +  +D   WNSMIAG
Sbjct: 309 RVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAG 368

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
           YCQ+G   +A  LF +M       N ++WN +ISGY Q G  D A ++F+ MG      R
Sbjct: 369 YCQSGRMSEALNLFRQMP----VKNAVSWNTMISGYAQAGEMDRATEIFEAMGV-----R 419

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           N  SWNSLI G+ Q G   +AL     M      P+  T    L +CA L A    K++H
Sbjct: 420 NVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLH 479

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
             +L+    + L V N+LI  YAK G +  +  +F  +   D+I+WNSLI GY L+G+ +
Sbjct: 480 ELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYAN 539

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            A   F+QM S G  P+  TF+ ++ A S AG+ + G  +F  + E + I P+ EHYS +
Sbjct: 540 EAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCL 599

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           +DL GR G+LEEA   +  M ++ ++ +W +LL ACR+H N++L  +A  RL +LEP + 
Sbjct: 600 VDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNA 659

Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
                +  ++A  G+ ED  ++R L RE       G  WIEV+N +  FV+
Sbjct: 660 SNYITLSNMHAEAGRWEDVERLRVLMRERRAGKLPGCSWIEVQNQIQNFVS 710


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 250/833 (30%), Positives = 398/833 (47%), Gaps = 97/833 (11%)

Query: 121 NLYTWSAMIGAYSRDQRWREVVELF--FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           +L  W+ ++   SR  R  + + +    L   DG+ PD F  P  L++C      + G+ 
Sbjct: 29  SLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRG----DDGRQ 84

Query: 179 MHSLVIKLGMSCVRR-VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
           +H++  KLG++     V NS++++Y +CG++  A + FE M  ++ V+WN++++      
Sbjct: 85  VHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPR 144

Query: 238 ENDEAHR-----LFDKMCREEIKLGVV------------------------------TFN 262
              E  R     L      +E  L  V                                N
Sbjct: 145 RGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSN 204

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF- 321
           +L+  Y + G+   A E        G   +V +W  M+ G+A+NG    A  L +EM   
Sbjct: 205 VLVDMYAKCGEMADA-ECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQME 263

Query: 322 -VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF--TDDVLVGNSLINMYSKCEE 378
             GV  + +T+ S +  C+ L  LA   E+H+  V+ G   T D +V N+LI  Y +C  
Sbjct: 264 ERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGD-MVPNALIAAYGRCGC 322

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM-----QESD--------- 424
           L  A RVFD I  K V SWN++I  + Q G    A ELF +M     Q+ D         
Sbjct: 323 LLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLL 382

Query: 425 ----------------------VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                 +  +      L+S YIQ G E  A  LF  + + D+V 
Sbjct: 383 ACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEV- 441

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQS--SCFYPNCVTILSVLPACAYLVASNKVK 520
               SWN++IAGY Q G    +L +FR+MQS     +P+ +   S L AC+ L A    K
Sbjct: 442 ----SWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGK 497

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
           E+H   L+  L     + +S+ID Y+K G++  +R  FD + +KD ++W  +I GY ++G
Sbjct: 498 EMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNG 557

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
               A+ L+D+M   G++P+  T+L +++A   AGM++ G   F  +    +I   +EHY
Sbjct: 558 RGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHY 617

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
           + +I +  R+G+  +A+  +E MP EPD+ I  ++L+AC +HG ++L     ++L +LEP
Sbjct: 618 ACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLELEP 677

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
                  L   +YA   + ++  KVRK+ R+       G  WI++   VY+FV G  S  
Sbjct: 678 HKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENSLP 737

Query: 761 YSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGI-----HSEKLALAFALIGSSQA 815
               +     ++ E + A        +   E EE   +     HSEK A+AF L+  +  
Sbjct: 738 EMHKVRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEALRWHSEKQAIAFGLL-RTAG 796

Query: 816 PHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           P  +R+ KNIRMC  CH  AK +S +   EI + D K  HHF++G CSCGDYW
Sbjct: 797 PTKVRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 186/707 (26%), Positives = 302/707 (42%), Gaps = 139/707 (19%)

Query: 36  GRLNEAITVLDSI--ATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV--TEIDV 91
           GR  +A+ +L  +  A+ G    R T    L++C   +     R++HA    +   + D 
Sbjct: 44  GRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDD----GRQVHAVAAKLGLADGDP 99

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV   L+S+Y +CG +DDA +VFE M  RNL +W+A++ A +  +R    +ELF   ++D
Sbjct: 100 FVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVADPRRG---LELFRDCLED 156

Query: 152 ---GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
                 PD+     +L  C      E G+ +H L +K G     RV N ++ +Y KCG++
Sbjct: 157 LGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEM 216

Query: 209 IWARRFFESMDEKDG---VAWNSMISGYFQIGENDEAHRLFDKMCREEIKL--------- 256
             A   F       G   V+WN M+ GY + GE   A  L  +M  EE  +         
Sbjct: 217 ADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLS 276

Query: 257 -----------------------------GVVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
                                        G +  N LI +Y   G+C   +   +  + +
Sbjct: 277 VLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAY---GRCGCLLHACRVFDGI 333

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAM 346
             +  V +W  +I   AQNG  S A++LF+EM+   G  P+  +I S + AC +LK L  
Sbjct: 334 -CSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLH 392

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G   H   ++ G   D  +  SL+++Y +C     A  +FD +++KD  SWN+MIAGY Q
Sbjct: 393 GKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQ 452

Query: 407 AGYCGKAYELFIKMQ-------------------------------------ESDVPPNV 429
            G  G++ +LF +MQ                                     ++D+  + 
Sbjct: 453 NGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDS 512

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
              + +I  Y + G+ D+A   F R+   D V     SW  +I GY   G+   A+G++ 
Sbjct: 513 FLSSSIIDMYSKCGSVDDARVFFDRLKAKDAV-----SWTVMITGYAVNGRGKEAVGLYD 567

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           KM      P+  T L +L AC +      + E   C  +     +LP + + ++ YA   
Sbjct: 568 KMGREGMEPDGFTYLGLLMACGH----AGMLEDGLCFFQEM--RNLPKIEAKLEHYA--- 618

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
                     GM S+               G +  A+ L + M     +P+     S++ 
Sbjct: 619 -------CVIGMLSR--------------AGRFADAVALMEVMPE---EPDAKILSSVLS 654

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIP-MIEHYSAMIDLYGRSGKLEE 655
           A  + G V+LGKKV   + E   + P   EHY    ++Y  S + +E
Sbjct: 655 ACHMHGEVELGKKVADKLLE---LEPHKAEHYVLASNMYAGSRQWDE 698



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 171/359 (47%), Gaps = 52/359 (14%)

Query: 35  NGRLNEAITVLDSIATQ--GAKVRRNTYINLLQACIDSNSIHLARKLHAF-----LNLVT 87
           NG    A  +L  +  +  G      T +++L  C     +   R+LHAF     L+L  
Sbjct: 247 NGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTG 306

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           ++   V   L++ Y +CGCL  A  VF+ +  + + +W+A+IGA++++      +ELF  
Sbjct: 307 DM---VPNALIAAYGRCGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFRE 363

Query: 148 MVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M    G  PD F    +L ACGN      GK  H  +++ G+     +R S+L+VY++CG
Sbjct: 364 MTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCG 423

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM----------------- 249
           +   AR  F++++EKD V+WN+MI+GY Q G   E+ +LF +M                 
Sbjct: 424 RESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSA 483

Query: 250 ---CRE--EIKLG---------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
              C E   ++LG                   + +I  Y++ G  D A     R+++   
Sbjct: 484 LVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKA--- 540

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
             D  +WT MI+G+A NGR  +A+ L+ +M   G+ P+G T    + AC     L  G+
Sbjct: 541 -KDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGL 598



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 173/367 (47%), Gaps = 13/367 (3%)

Query: 35  NGRLNEAITVLDSIATQ-GAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVF 92
           NG  + AI +   +    G K    +  +LL AC +   +   +  H F L    E D F
Sbjct: 351 NGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSF 410

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV--Q 150
           ++  LLSVY +CG    AR +F+ + E++  +W+ MI  YS++    E ++LF  M   +
Sbjct: 411 IRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKK 470

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G +P        L AC        GK MH   +K  +     + +S++ +Y KCG +  
Sbjct: 471 GGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDD 530

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           AR FF+ +  KD V+W  MI+GY   G   EA  L+DKM RE ++    T+  L+ +   
Sbjct: 531 ARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGH 590

Query: 271 LGQCDVAMEMVKRMESLG-ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G  +  +   + M +L  I   +  + C+I   ++ GR + A+ L + M      P+  
Sbjct: 591 AGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMP---EEPDAK 647

Query: 330 TITSAISACTDLKALAMGMEIHS--LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            ++S +SAC     + +G ++    L ++    +  ++ +   NMY+   + +   +V  
Sbjct: 648 ILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLAS---NMYAGSRQWDEMRKVRK 704

Query: 388 MIKDKDV 394
           M++D  V
Sbjct: 705 MLRDAGV 711



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 129/286 (45%), Gaps = 23/286 (8%)

Query: 464 NTAS---WNSLIAGYQQLGQKNNALGVFRKM--QSSCFYPNCVTILSVLPACAYLVASNK 518
           N AS   WN L+A   + G+  +AL +  ++   S    P+  T+   L +C      + 
Sbjct: 26  NAASLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCR----GDD 81

Query: 519 VKEIHGCVLRRSLESSLP-VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
            +++H    +  L    P V NSL+  Y + G +  +  +F+GM+ +++++WN+L+    
Sbjct: 82  GRQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVA 141

Query: 578 LHGFWHAALDLF-DQMKSFG--LKPNRGTFLSIILAHSLAGMVDLGKKVF-CSITECYQI 633
                   L+LF D ++  G    P+  T ++++   +     + G+ V   ++   +  
Sbjct: 142 DP---RRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDA 198

Query: 634 IPMIEHYSAMIDLYGRSGKLEEA-MEFIEDMPIEPDSSI-WEALLTACRIHGNIDLAVLA 691
            P +   + ++D+Y + G++ +A   F+E  P    + + W  +L     +G    A   
Sbjct: 199 APRVS--NVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGL 256

Query: 692 IERLFDLEPGDVLIQRLILQIYAIC-GKPEDALKVRKLERENTRRN 736
           +  +   E G    +  +L +  +C G PE A K+R+L     RR 
Sbjct: 257 LREMQMEERGVPADEITMLSVLPVCSGLPELA-KLRELHAFVVRRG 301


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 230/776 (29%), Positives = 383/776 (49%), Gaps = 87/776 (11%)

Query: 172 DFEAGKLMHSLVIKLG--MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE--KDGVAWN 227
           D   G+ +   +++ G  +     V NS+L +Y KC  +  AR  F+ M    +D V+W 
Sbjct: 62  DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEI--------------------------------K 255
           +M S   + G   EA RLF +   E +                                K
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFK 181

Query: 256 LGVVTFNI-----LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTS 310
           LG    ++     LI  + + G   VAM   +R+        V  WT +I+ +AQ+G + 
Sbjct: 182 LGFWGTDVSVGCALIDMFAKNGDL-VAM---RRVFDGLFERTVVVWTLLITRYAQSGYSD 237

Query: 311 QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI 370
           +A++LF +M   G  P+  T++S +SACT+L +  +G ++HSLA+++G   D  V   L+
Sbjct: 238 EAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLV 297

Query: 371 NMYSKC---EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC-GKAYELFIKMQESDVP 426
           +MY+K    + L  A  VF+ +   +V +W ++++GY Q G    +   LF KM    + 
Sbjct: 298 DMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIR 357

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALG 486
           PN IT++ ++      G++D    +     K++    N    N+L++ Y + G    A  
Sbjct: 358 PNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVG-NALVSMYAESGSIEEARH 416

Query: 487 VFRKM----------------QSSCFYP----------NCVTILSVLPACAYLVASNKVK 520
            F ++                +S+ +            +  T  S++ A A +    K +
Sbjct: 417 AFDQLYEKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQ 476

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
            +H   L+    S   + NSL+  Y++ G +V +  +FD M+  ++I+W S+I G   HG
Sbjct: 477 RLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHG 536

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
           +   AL+LF  M + G+KPN  T+++++ A S AG+V  GK+ F  + + + +IP +EHY
Sbjct: 537 YAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHY 596

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
           + M+DL GRSG +E+A++FI +MP + D+ +W+ LL AC+ H N+D+  +A   +  LEP
Sbjct: 597 ACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEP 656

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
            D     L+  +YA  G  +   ++R L R+       G  W+ V N ++ F  G  S  
Sbjct: 657 QDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEFRAGDTSHP 716

Query: 761 YSDLLYSWLQNVPENV--------TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGS 812
            ++ +Y+ L+ +   +        T+   H    + +E KE     HSEK+A+AF LI  
Sbjct: 717 QAEEIYTKLETLIREIKVMGYVPDTSVVLHD---MSDELKELCLLQHSEKIAVAFGLISC 773

Query: 813 SQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           + A   IRI KN+R+CV CH   KYVS     EI L DS   H  K+G+CSCG+YW
Sbjct: 774 TSATKPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEYW 829



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 219/462 (47%), Gaps = 37/462 (8%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-- 89
           L  NG   EA+ +      +G      T     QAC  S   HLA    A L LV ++  
Sbjct: 127 LSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGG--AVLGLVFKLGF 184

Query: 90  ---DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
              DV V   L+ ++AK G L   R VF+ + ER +  W+ +I  Y++     E VELF 
Sbjct: 185 WGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFL 244

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC- 205
            M+++G  PD +    +L AC   G F  G+ +HSL ++LG+     V   ++ +Y K  
Sbjct: 245 DMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSH 304

Query: 206 --GKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND-EAHRLFDKMCREEIKLGVVTFN 262
               L  AR  F  M + + +AW +++SGY Q G  D +   LF KM  E I+   +T++
Sbjct: 305 NGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYS 364

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM--- 319
            ++++   LG  D   ++        +         ++S +A++G   +A   F ++   
Sbjct: 365 SMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEK 424

Query: 320 ---SFVG-----------------VMPNGV---TITSAISACTDLKALAMGMEIHSLAVK 356
              SF G                  M  G+   T  S ISA   +  L  G  +H+L++K
Sbjct: 425 NMVSFSGNLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALSLK 484

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            GF  D  +GNSL++MYS+C  L  A +VFD + D +V SW SMI+G  + GY  +A EL
Sbjct: 485 AGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALEL 544

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           F  M  + V PN +T+  ++S     G   E  + F+ M K+
Sbjct: 545 FHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKH 586



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 153/581 (26%), Positives = 253/581 (43%), Gaps = 91/581 (15%)

Query: 73  IHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE--RNLYTWSA 127
           IHL R L   L     + E D  V   LL++Y+KC  +  AR VF+ M    R+L +W+A
Sbjct: 63  IHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTA 122

Query: 128 MIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE-AGKLMHSLVIKL 186
           M    SR+    E + LF   +++GL P+ F      QAC     F  AG  +  LV KL
Sbjct: 123 MASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVFKL 182

Query: 187 GM-SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRL 245
           G       V  +++ ++ K G L+  RR F+ + E+  V W  +I+ Y Q G +DEA  L
Sbjct: 183 GFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVEL 242

Query: 246 FDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD------------- 292
           F  M     +    T + ++ +  +LG   +  ++      LG+  D             
Sbjct: 243 FLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAK 302

Query: 293 ---------------------VFTWTCMISGFAQNG-RTSQALDLFKEMSFVGVMPNGVT 330
                                V  WT ++SG+ Q G + +Q + LF +M   G+ PN +T
Sbjct: 303 SHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHIT 362

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
            +S + AC +L     G +IH+  VK    D  +VGN+L++MY++   +E A   FD + 
Sbjct: 363 YSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLY 422

Query: 391 DKDV------------------------------YSWNSMIAGYCQAGYCGKAYELFIKM 420
           +K++                              +++ S+I+     G   K   L    
Sbjct: 423 EKNMVSFSGNLDGDGRSNTYQDYQIERMELGISTFTFGSLISAAASVGMLTKGQRLHALS 482

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
            ++    +    N L+S Y + G   +A  +F  M  ND    N  SW S+I+G  + G 
Sbjct: 483 LKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEM--ND---HNVISWTSMISGLAKHGY 537

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAY--LVASNK-----VKEIHGCVLRRSLES 533
              AL +F  M ++   PN VT ++VL AC++  LV   K     +++ HG + R     
Sbjct: 538 AARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPR----- 592

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLI 573
            +     ++D   +SG +  +    + M  + D + W +L+
Sbjct: 593 -MEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLL 632



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 168/358 (46%), Gaps = 11/358 (3%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV-FVKTKL 97
           N+ + +   +  +G +    TY ++L+AC +       R++H         D+  V   L
Sbjct: 342 NQVMILFCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNAL 401

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           +S+YA+ G +++AR  F+ + E+N+ ++S  +    R   +++     + + +  L    
Sbjct: 402 VSMYAESGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQD-----YQIERMELGIST 456

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
           F F  ++ A  + G    G+ +H+L +K G    R + NS++++Y +CG L+ A + F+ 
Sbjct: 457 FTFGSLISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDE 516

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
           M++ + ++W SMISG  + G    A  LF  M    +K   VT+  ++ + +  G     
Sbjct: 517 MNDHNVISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEG 576

Query: 278 MEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
            E  + M+   G+ P +  + CM+    ++G    ALD   EM       + +   + + 
Sbjct: 577 KEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMP---CQVDALVWKTLLG 633

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           AC     + +G EI +  V      D      L N+Y++    +   R+  +++DK++
Sbjct: 634 ACKTHNNMDIG-EIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNL 690


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 212/647 (32%), Positives = 333/647 (51%), Gaps = 70/647 (10%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++  W  M+ G A +      L+++  M   G +PN  T    + +C   K    G +I
Sbjct: 46  PNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQI 105

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELE------------------------------ 380
           H+  +K+G   D     SLI+MY++   LE                              
Sbjct: 106 HAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDV 165

Query: 381 -AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
            +A +VFD I ++DV SWN+MI GY +     +A ELF +M  ++V P+  T   ++S  
Sbjct: 166 RSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSAC 225

Query: 440 IQNGNED------EAVDLFQRMGKNDKVK-------------------------RNTASW 468
            Q+G+ +        VD     G + K+                          ++  SW
Sbjct: 226 AQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSW 285

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           N+LI GY  +     AL +F++M  S   PN VT+LSVLPACA+L A +  + IH  + +
Sbjct: 286 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDK 345

Query: 529 R--SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           R   + +   +  SLID YAK G+I  +  +F+ M  K + +WN++I G+ +HG  +AA 
Sbjct: 346 RLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAF 405

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
           DLF +M+  G++P+  T + ++ A S +G++DLG+ +F S+T+ Y I P +EHY  MIDL
Sbjct: 406 DLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDL 465

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            G +G  +EA E I  MP+EPD  IW +LL AC++HGN++LA    ++L ++EP +    
Sbjct: 466 LGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSY 525

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
            L+  IYA  G+ ED  ++R++      +   G   IE+ ++V+ F+ G      S  +Y
Sbjct: 526 VLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQSREIY 585

Query: 767 SWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRI 821
             L+ +            +S     +EEE KE     HSEKLA+AF LI S++    + +
Sbjct: 586 RMLEEMDVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI-STKPGTKLTV 644

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           VKN+R+C +CHE  K +S ++  EI   D    HHF++G CSC DYW
Sbjct: 645 VKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCDYW 691



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 137/542 (25%), Positives = 246/542 (45%), Gaps = 77/542 (14%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A  VFE  +E NL  W+ M+   +        +E++  MV  G  P+ + FP +L++C  
Sbjct: 36  AVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAK 95

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
              FE G+ +H+ V+KLG    R    S++++Y + G+L  AR+ F+   ++D V+  ++
Sbjct: 96  SKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTAL 155

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           I+GY   G+   A ++FD +   +    VV++N +I  Y +    + A+E+ K M    +
Sbjct: 156 ITGYASRGDVRSARKVFDXITERD----VVSWNAMITGYVENCGYEEALELFKEMMRTNV 211

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            PD  T                                   + S +SAC    ++ +G E
Sbjct: 212 RPDEGT-----------------------------------LVSVLSACAQSGSIELGRE 236

Query: 350 IHSLA-VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           IH+L     GF   + + N+ I +YSKC ++E A  +F+ +  KDV SWN++I GY    
Sbjct: 237 IHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMN 296

Query: 409 YCGKAYELFIKMQESDVPPNVIT------------------W-NVLISGYIQNGNEDEA- 448
              +A  LF +M  S   PN +T                  W +V I   ++      A 
Sbjct: 297 LYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSAL 356

Query: 449 ----VDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
               +D++ + G         N  + ++ +SWN++I G+   G+ N A  +F +M+ +  
Sbjct: 357 RTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGI 416

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSR 555
            P+ +T++ +L AC++    +  + I   V +  ++   L     +ID    +G    + 
Sbjct: 417 EPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAE 476

Query: 556 TIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSL 613
            I   M    D + W SL+    +HG    A + F Q K   ++P N G+++ +   ++ 
Sbjct: 477 EIIHMMPMEPDGVIWCSLLKACKMHGNLELA-ESFAQ-KLMEIEPENSGSYVLLSNIYAT 534

Query: 614 AG 615
           AG
Sbjct: 535 AG 536



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 211/492 (42%), Gaps = 70/492 (14%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLN 84
           +T L  L  +  L   + +   + + G      T+  LL++C  S +    R++HA  + 
Sbjct: 52  NTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMK 111

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFE---------------------DMR----- 118
           L  E+D +  T L+S+YA+ G L+DAR+VF+                     D+R     
Sbjct: 112 LGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKV 171

Query: 119 -----ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF 173
                ER++ +W+AMI  Y  +  + E +ELF  M++  + PD+     +L AC   G  
Sbjct: 172 FDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSI 231

Query: 174 EAGKLMHSLV-IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISG 232
           E G+ +H+LV    G     ++ N+ + +Y KCG +  A   FE +  KD V+WN++I G
Sbjct: 232 ELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGG 291

Query: 233 YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA--------------- 277
           Y  +    EA  LF +M R       VT   ++ +   LG  D+                
Sbjct: 292 YTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVT 351

Query: 278 ---------MEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEM 319
                    ++M  +   +     VF         +W  MI GFA +GR + A DLF  M
Sbjct: 352 NGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRM 411

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEE 378
              G+ P+ +T+   +SAC+    L +G  I  S+      T  +     +I++      
Sbjct: 412 RKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGL 471

Query: 379 LEAAERVFDMIK-DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
            + AE +  M+  + D   W S++      G    A     K+ E + P N  ++ +L +
Sbjct: 472 FKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIE-PENSGSYVLLSN 530

Query: 438 GYIQNGN-EDEA 448
            Y   G  ED A
Sbjct: 531 IYATAGRWEDVA 542


>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
 gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
          Length = 744

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 226/741 (30%), Positives = 368/741 (49%), Gaps = 102/741 (13%)

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI--KLGMSCVRR-------- 193
           LF  M + G+ PD F F  + +    C    +    HSL++   L  +C+R         
Sbjct: 90  LFRRMRRAGVRPDGFTFHFLFK----CSSSSSRP--HSLLLCTMLHAACLRTMLPSAAPF 143

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
           V NS++ +Y++ G    ARR F+ +  KD VAW  +ISG  ++G           +C  +
Sbjct: 144 VSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMG----------MLCDTQ 193

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
           + L                             S     DV +WT +I+ +++  R  +A+
Sbjct: 194 LLL-----------------------------SQAPVRDVISWTSLIAAYSRANRAREAV 224

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
             FK M   G+ P+ VT+ + +SAC  LK L +G  +H L  + G      +  +LI+MY
Sbjct: 225 GCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMY 284

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
           +KC +   A++VFD +                     G+              P   +WN
Sbjct: 285 AKCGDFGHAQQVFDAL---------------------GRG-------------PRPQSWN 310

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
            +I GY ++G+ D A  LF  M   D +     ++NS++ GY   GQ   AL +F  M+ 
Sbjct: 311 AIIDGYCKHGHVDVARSLFDEMEVRDII-----TFNSMMTGYIHSGQLREALLLFMSMRR 365

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
                +  T++++L ACA L A  + + +H C+ +R +E+ + +  +L+D Y K G +  
Sbjct: 366 HDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDE 425

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           +  +F  M  +D+ TW ++I G   +G   AAL+ F QM+  G +PN  ++++++ A S 
Sbjct: 426 ATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSH 485

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           + +++ G+  F  +   Y I P IEHY  MIDL GRSG L+EAM+ ++ MPI+P++ IW 
Sbjct: 486 SCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWA 545

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
           ++L+ACR+H +IDLA  A E L  LEP +  +   +  IY    + E+A K+R L  E  
Sbjct: 546 SILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQ 605

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIE 788
            + + G   I V   V+ FV    S      + + L+ +   +     +  +S   + ++
Sbjct: 606 VKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVD 665

Query: 789 EEEKEEISGIHSEKLALAFALIGSSQAPH-TIRIVKNIRMCVHCHETAKYVSMMHHCEIF 847
           EEEKE+    HSEKLA+AF LI  + AP+  + I KN+R+C  CH   K +S + + EI 
Sbjct: 666 EEEKEQALLAHSEKLAIAFGLI--NLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREII 723

Query: 848 LADSKCLHHFKNGQCSCGDYW 868
           + D    HHF+ G CSC D+W
Sbjct: 724 VRDRSRFHHFREGTCSCNDFW 744



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 191/422 (45%), Gaps = 43/422 (10%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D    T L+S  AK G L D + +      R++ +W+++I AYSR  R RE V  F  M+
Sbjct: 172 DAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTML 231

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             G+ PD+     +L AC    D E G+ +H LV + GM     +  +++ +Y KCG   
Sbjct: 232 SHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFG 291

Query: 210 WARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
            A++ F+++       +WN++I GY + G  D A  LFD+M   E++  ++TFN ++  Y
Sbjct: 292 HAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEM---EVR-DIITFNSMMTGY 347

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
                                                +G+  +AL LF  M    +  + 
Sbjct: 348 -----------------------------------IHSGQLREALLLFMSMRRHDLRVDN 372

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            T+ + ++AC  L AL  G  +H+   +     D+ +G +L++MY KC  ++ A  VF  
Sbjct: 373 FTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQR 432

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           +  +DV++W +MIAG    G    A E F +M+     PN +++  +++    +   +E 
Sbjct: 433 MGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEG 492

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
              F  M     +      +  +I    + G  + A+ + + M      PN V   S+L 
Sbjct: 493 RLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMP---IQPNAVIWASILS 549

Query: 509 AC 510
           AC
Sbjct: 550 AC 551



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 97/416 (23%), Positives = 179/416 (43%), Gaps = 42/416 (10%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---------NLVT 87
           R  EA+    ++ + G      T I +L AC     + L R LH  +         NLV 
Sbjct: 219 RAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVV 278

Query: 88  E-IDVFVK-----------------------TKLLSVYAKCGCLDDAREVFEDMRERNLY 123
             ID++ K                         ++  Y K G +D AR +F++M  R++ 
Sbjct: 279 ALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDII 338

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
           T+++M+  Y    + RE + LF  M +  L  D+F    +L AC + G  + G+ +H+ +
Sbjct: 339 TFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACI 398

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
            +  +     +  ++L +Y+KCG++  A   F+ M ++D   W +MI+G    G    A 
Sbjct: 399 EQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAAL 458

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISG 302
             F +M  +  +   V++  ++ + +     +        M  L  I P +  + CMI  
Sbjct: 459 EHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDL 518

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
             ++G   +A+DL K M    + PN V   S +SAC   K + +        +K+   +D
Sbjct: 519 LGRSGLLDEAMDLVKTMP---IQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDED 575

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
             V   L N+Y    + E A ++  +++++ V       AGY      G+ ++  +
Sbjct: 576 G-VYVQLYNIYIDSRQWENASKIRMLMEERQV----KKTAGYSSITVAGQVHKFVV 626



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 80/145 (55%), Gaps = 1/145 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           +G+L EA+ +  S+     +V   T +NLL AC    ++   R LHA +   + E D+++
Sbjct: 350 SGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYL 409

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T LL +Y KCG +D+A  VF+ M +R+++TW+AMI   + +   +  +E F+ M  DG 
Sbjct: 410 GTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGF 469

Query: 154 FPDDFLFPKILQACGNCGDFEAGKL 178
            P+   +  +L AC +      G+L
Sbjct: 470 QPNSVSYIAVLTACSHSCLLNEGRL 494


>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 640

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 208/656 (31%), Positives = 342/656 (52%), Gaps = 31/656 (4%)

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV----AMEM 280
           AW S++S    +    + H    ++C+  +    + F  L      L  C +    A+  
Sbjct: 4   AWVSLLSKCSSLKPTKQIH---AQICKTGLHTDPLVFGKL------LLHCAITISDALHY 54

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM-PNGVTITSAISACT 339
             R+      PD F    +I   + +     +L  F ++     + P+  T   A+ A  
Sbjct: 55  ALRLFHHFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVA 114

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           + + L  G+++HS A + GF   + VG +LI+MY++C +  +A RVFD + + +V +WN+
Sbjct: 115 NSRHLRPGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNA 174

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           ++    + G    A ++F  M       N+ +WN +++GY + G    A  +F  M   D
Sbjct: 175 VLTAAFRCGDVEGAQDVFGCMPVR----NLTSWNGMLAGYAKAGELGLARRVFYEMPLRD 230

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
           +V     SW+++I G+   G  + A G FR++       N V++  VL ACA   A    
Sbjct: 231 EV-----SWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFG 285

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVL 578
           K +HG V +        V N+LIDTY+K GN+  +R +F  M  ++ I++W S+I G  +
Sbjct: 286 KILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAM 345

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           HG    A+ LF +M+  G++P+  TF+S++ A S +G+V+ G  +F  +   Y I P IE
Sbjct: 346 HGCGEEAIQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIE 405

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
           HY  M+DLYGR+ +L++A EFI +MP+ P++ IW  LL AC IHGNI++A L   RL ++
Sbjct: 406 HYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIWRTLLGACSIHGNIEMAELVKARLAEM 465

Query: 699 EPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS 758
           +P +     L+  +YA+ GK +D   +R+   E++ + + G   IE+  ++Y FV G   
Sbjct: 466 DPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGFVAGEKP 525

Query: 759 ESYSDLLYSWLQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLALAFALIGS 812
              ++  +  L+ +   +   + ++         IEEEEKE+    HSEKLA AF  I  
Sbjct: 526 NEVTEEAHEKLREIMLRLRTEAGYAPQLRSVLHDIEEEEKEDSVSKHSEKLAAAFG-IAK 584

Query: 813 SQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
                 +RIVKN+R+C  CH   K +S ++  EI + D    H FK+G CSC DYW
Sbjct: 585 LPKGRILRIVKNLRVCGDCHTVMKLISKVYQVEIIVRDRSRFHSFKDGFCSCRDYW 640



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 238/540 (44%), Gaps = 41/540 (7%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
            +++LL  C   +S+   +++HA +    L T+  VF K  L         L  A  +F 
Sbjct: 4   AWVSLLSKC---SSLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFH 60

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFF-LMVQDGLFPDDFLFPKILQACGNCGDFE 174
                + +  + +I + S  Q     +  F  L  Q  L PD F F   L+A  N     
Sbjct: 61  HFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLR 120

Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
            G  +HS   + G      V  +++++Y +CG    ARR F+ M E + V WN++++  F
Sbjct: 121 PGIQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAF 180

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
           + G+ + A  +F  M    +     ++N ++  Y + G+  +A  +   M       D  
Sbjct: 181 RCGDVEGAQDVFGCMPVRNL----TSWNGMLAGYAKAGELGLARRVFYEMP----LRDEV 232

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +W+ MI GFA NG   +A   F+E+    +  N V++T  +SAC    A   G  +H   
Sbjct: 233 SWSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFV 292

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            K GF     V N+LI+ YSKC  +  A  VF +M   + + SW S+IAG    G   +A
Sbjct: 293 EKAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEA 352

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            +LF +M+ES V P+ IT+  L+     +G  +E   LF +M     ++     +  ++ 
Sbjct: 353 IQLFHEMEESGVRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVD 412

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV-LRRSLE 532
            Y +  +   A     +M  S   PN +   ++L AC+          IHG + +   ++
Sbjct: 413 LYGRAARLQKAYEFICEMPVS---PNAIIWRTLLGACS----------IHGNIEMAELVK 459

Query: 533 SSLPVMNS--------LIDTYAKSG---NIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           + L  M+         L + YA +G   ++   R      S K    W+ +    V++GF
Sbjct: 460 ARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEIDKVIYGF 519



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 4/202 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV-FV 93
           NG  +EA      +  +  +    +   +L AC  + +    + LH F+     + V  V
Sbjct: 244 NGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSV 303

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMR-ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              L+  Y+KCG +  AR VF++M   R++ +W+++I   +      E ++LF  M + G
Sbjct: 304 NNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESG 363

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL-GMSCVRRVRNSVLAVYVKCGKLIWA 211
           + PD   F  +L AC + G  E G  + S +  L G+         ++ +Y +  +L  A
Sbjct: 364 VRPDGITFISLLYACSHSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKA 423

Query: 212 RRFFESMD-EKDGVAWNSMISG 232
             F   M    + + W +++  
Sbjct: 424 YEFICEMPVSPNAIIWRTLLGA 445


>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 213/615 (34%), Positives = 316/615 (51%), Gaps = 54/615 (8%)

Query: 259 VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
           V  + L RSY  LG+ D ++ +  R ++    P VF WT +I G A  G   QAL+ + +
Sbjct: 10  VPLDKLQRSYASLGRLDYSVALFGRTQN----PSVFFWTAIIHGHALRGLHEQALNFYAQ 65

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   GV PN  T +S +  C     +  G  +HS AVK+GF  D+ V   L+++Y++   
Sbjct: 66  MLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYAR--- 118

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
                         DV S                A +LF  M E     ++++   +++ 
Sbjct: 119 ------------GGDVVS----------------AQQLFDTMPEK----SLVSLTAMLTC 146

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
           Y ++G  D A  LF  M + D V      WN +I GY Q G  N AL +FR+M  +   P
Sbjct: 147 YAKHGELDAARVLFDGMEERDGV-----CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKP 201

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           N VT+LSVL AC  L A    + +H  +    ++ ++ V  +L+D Y+K G++  +R +F
Sbjct: 202 NEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVF 261

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           D +  KD++ WNS+I GY + GF   AL LF  M   GL P   TF+ I+ A   +G V 
Sbjct: 262 DKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVT 321

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            G  +F  + + Y I P IEHY  M++L GR+G +E+A E +++M IEPD  +W  LL A
Sbjct: 322 EGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGA 381

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
           CR+HG I L    +E L D    +     L+  IYA  G  +   ++R + +++  +   
Sbjct: 382 CRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEP 441

Query: 739 GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKE 793
           G   IEV N V+ F+ GG +      +Y  L+ +         T ++      I E EKE
Sbjct: 442 GCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKE 501

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
               +HSEKLA+AF LI ++Q   TI+IVKN+R+C  CHE  K +S +   +I + D   
Sbjct: 502 RSLEVHSEKLAIAFGLI-NTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNR 560

Query: 854 LHHFKNGQCSCGDYW 868
            HHF NG CSCGDYW
Sbjct: 561 FHHFVNGSCSCGDYW 575



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/415 (29%), Positives = 189/415 (45%), Gaps = 46/415 (11%)

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
           KL   YA  G LD +  +F   +  +++ W+A+I  ++      + +  +  M+  G+ P
Sbjct: 14  KLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEP 73

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           + F F  IL+ C      E GK +HS  +KLG      VR  +L VY + G ++ A++ F
Sbjct: 74  NAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLF 129

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           ++M EK                                    +V+   ++  Y + G+ D
Sbjct: 130 DTMPEKS-----------------------------------LVSLTAMLTCYAKHGELD 154

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            A  +   ME      D   W  MI G+ QNG  ++AL LF+ M      PN VT+ S +
Sbjct: 155 AARVLFDGMEER----DGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVL 210

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
           SAC  L AL  G  +HS     G   +V VG +L++MYSKC  LE A  VFD I DKDV 
Sbjct: 211 SACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVV 270

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           +WNSMI GY   G+  +A +LF  M    + P  IT+  ++S    +G   E  D+F +M
Sbjct: 271 AWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKM 330

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                ++     +  ++    + G    A  + + M      P+ V   ++L AC
Sbjct: 331 KDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMN---IEPDPVLWGTLLGAC 382



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 183/394 (46%), Gaps = 45/394 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           G   +A+     + TQG +    T+ ++L+ C     I   + LH+  + L  + D++V+
Sbjct: 54  GLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVR 109

Query: 95  TKLLSVYA-------------------------------KCGCLDDAREVFEDMRERNLY 123
           T LL VYA                               K G LD AR +F+ M ER+  
Sbjct: 110 TGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGV 169

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
            W+ MI  Y+++    E + LF  M++    P++     +L ACG  G  E+G+ +HS +
Sbjct: 170 CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 229

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
              G+     V  +++ +Y KCG L  AR  F+ +D+KD VAWNSMI GY   G + EA 
Sbjct: 230 ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEAL 289

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISG 302
           +LF  MCR  +    +TF  ++ +    G      ++  +M +  GI P +  + CM++ 
Sbjct: 290 QLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNL 349

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
             + G   QA +L K M+   + P+ V   + + AC     +A+G +I  L V     + 
Sbjct: 350 LGRAGHVEQAYELVKNMN---IEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANS 406

Query: 363 VLVGNSLI--NMYSKCEELEAAERVFDMIKDKDV 394
              G  ++  N+Y+     +   R+  M+KD  V
Sbjct: 407 ---GTYILLSNIYAAVGNWDGVARLRTMMKDSGV 437



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 123/293 (41%), Gaps = 42/293 (14%)

Query: 422 ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK 481
           E   PP  +  + L   Y   G  D +V LF R  +N  V      W ++I G+   G  
Sbjct: 2   EDKKPPAXVPLDKLQRSYASLGRLDYSVALFGRT-QNPSV----FFWTAIIHGHALRGLH 56

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
             AL  + +M +    PN  T  S+L  C         K +H   ++   +S L V   L
Sbjct: 57  EQALNFYAQMLTQGVEPNAFTFSSILKLCPI----EPGKALHSQAVKLGFDSDLYVRTGL 112

Query: 542 IDTYAKSGNIV-------------------------------YSRTIFDGMSSKDIITWN 570
           +D YA+ G++V                                +R +FDGM  +D + WN
Sbjct: 113 LDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWN 172

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC 630
            +I GY  +G  + AL LF +M     KPN  T LS++ A    G ++ G+ V  S  E 
Sbjct: 173 VMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVH-SYIEN 231

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
             I   +   +A++D+Y + G LE+A   + D   + D   W +++    + G
Sbjct: 232 NGIQFNVHVGTALVDMYSKCGSLEDA-RLVFDKIDDKDVVAWNSMIVGYAMXG 283



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 128/267 (47%), Gaps = 4/267 (1%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVT 87
           +D    NG  NEA+ +   +    AK    T +++L AC    ++   R +H+++ N   
Sbjct: 175 IDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGI 234

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + +V V T L+ +Y+KCG L+DAR VF+ + ++++  W++MI  Y+     +E ++LF  
Sbjct: 235 QFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKS 294

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M + GL P +  F  IL ACG+ G    G  + + +  + G+         ++ +  + G
Sbjct: 295 MCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAG 354

Query: 207 KLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            +  A    ++M+ E D V W +++      G+     ++ + +  + +     T+ +L 
Sbjct: 355 HVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLA-NSGTYILLS 413

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPD 292
             Y  +G  D    +   M+  G+  +
Sbjct: 414 NIYAAVGNWDGVARLRTMMKDSGVKKE 440


>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 231/768 (30%), Positives = 355/768 (46%), Gaps = 117/768 (15%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           LD A  +F  +        + ++  +SR       + L+  + ++G   D F FP +L+A
Sbjct: 65  LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRR-VRNSVLAVYVKCGKLIWARRFFESMDEKDGVA 225
                    G  +H L  K G       ++++++A+Y  CG+++                
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIM---------------- 168

Query: 226 WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME 285
                          +A  LFDKM                                    
Sbjct: 169 ---------------DARFLFDKMSHR--------------------------------- 180

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
                 DV TW  MI G++QN      L L++EM   G  P+ + + + +SAC     L+
Sbjct: 181 ------DVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLS 234

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
            G  IH      GF     +  SL+NMY+ C  +  A  V+D +  K             
Sbjct: 235 YGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSK------------- 281

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
                                 +++    ++SGY + G   +A  +F RM     V+++ 
Sbjct: 282 ----------------------HMVVSTAMLSGYAKLGMVQDARFIFDRM-----VEKDL 314

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
             W+++I+GY +  Q   AL +F +MQ     P+ +T+LSV+ ACA + A  + K IH  
Sbjct: 315 VCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTY 374

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
             +     +LP+ N+LID YAK GN+V +R +F+ M  K++I+W+S+I  + +HG   +A
Sbjct: 375 ADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSA 434

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           + LF +MK   ++PN  TF+ ++ A S AG+V+ G+K F S+   ++I P  EHY  M+D
Sbjct: 435 IALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVD 494

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           LY R+  L +AME IE MP  P+  IW +L++AC+ HG I+L   A  RL +LEP     
Sbjct: 495 LYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGA 554

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
             ++  IYA   + +D   VRKL +            IEV N V+ F+        SD +
Sbjct: 555 LVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEI 614

Query: 766 YSWLQNVPEN---VTARSSHSGLCIEEEEKEEISGI--HSEKLALAFALIGSSQAPHTIR 820
           Y  L  V      V    S SG+ ++ EE+E+   +  HSEKLAL + LIG  +    IR
Sbjct: 615 YKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLIGERKES-CIR 673

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IVKN+R+C  CH   K VS +H  EI + D    HHF  G CSC DYW
Sbjct: 674 IVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 229/501 (45%), Gaps = 46/501 (9%)

Query: 14  SLLTKKSNP--RFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSN 71
           SL +   NP  RF +  L            +++   +   G  + R ++  LL+A    +
Sbjct: 70  SLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLS 129

Query: 72  SIHLARKLHAFLNLVT--EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMI 129
           +++L  ++H   +       D F+++ L+++YA CG + DAR +F+ M  R++ TW+ MI
Sbjct: 130 ALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMI 189

Query: 130 GAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMS 189
             YS++  +  V++L+  M   G  PD  +   +L AC + G+   GK +H  +   G  
Sbjct: 190 DGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFR 249

Query: 190 CVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
               ++ S++ +Y  CG +  AR  ++ +  K  V   +M+SGY ++G   +A  +FD+M
Sbjct: 250 VGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRM 309

Query: 250 CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT 309
             +++    V ++ +I  Y +  Q   A+++   M+   I PD  T              
Sbjct: 310 VEKDL----VCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQIT-------------- 351

Query: 310 SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL 369
                                + S ISAC ++ AL     IH+ A K GF   + + N+L
Sbjct: 352 ---------------------MLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNAL 390

Query: 370 INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           I+MY+KC  L  A  VF+ +  K+V SW+SMI  +   G    A  LF +M+E ++ PN 
Sbjct: 391 IDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNG 450

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
           +T+  ++      G  +E    F  M    ++      +  ++  Y +      A+ +  
Sbjct: 451 VTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIE 510

Query: 490 KMQSSCFYPNCVTILSVLPAC 510
            M    F PN +   S++ AC
Sbjct: 511 TMP---FPPNVIIWGSLMSAC 528



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 156/313 (49%), Gaps = 7/313 (2%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
           G L+    +   I   G +V  +   +L+    +  ++HLAR+++   + +    + V T
Sbjct: 231 GNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVY---DQLPSKHMVVST 287

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            +LS YAK G + DAR +F+ M E++L  WSAMI  Y+   +  E ++LF  M +  + P
Sbjct: 288 AMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVP 347

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D      ++ AC N G     K +H+   K G      + N+++ +Y KCG L+ AR  F
Sbjct: 348 DQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVF 407

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           E+M  K+ ++W+SMI+ +   G+ D A  LF +M  + I+   VTF  ++ + +  G  +
Sbjct: 408 ENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVE 467

Query: 276 VAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
              +    M     I+P    + CM+  + +     +A++L + M F    PN +   S 
Sbjct: 468 EGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFP---PNVIIWGSL 524

Query: 335 ISACTDLKALAMG 347
           +SAC +   + +G
Sbjct: 525 MSACQNHGEIELG 537


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 200/626 (31%), Positives = 337/626 (53%), Gaps = 53/626 (8%)

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
            W+ +I  +  +     +   F  M  + V PN     S + A T LK   +   +H+  
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 355 VKMGFTDDVLVGNSLINMYSKCEE---------------LEAAERVFDMIKDKDVYSWNS 399
           V++G   D+ + N+LIN Y+K                  ++  ++VFDM+  +DV SWN+
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196

Query: 400 MIAGYCQAGYCGKAYELFIKM-QESDVPPNVITWNVL---------------ISGY-IQN 442
           +IAG+ Q G   +A ++  +M +   + P+  T + +               I GY ++N
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256

Query: 443 GNEDEA------VDLFQRMGKND--------KVKRNTASWNSLIAGYQQLGQKNNALGVF 488
           G + +       +D++ +  + +          +++  SWNS+IAG  Q G+ +  LG F
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFF 316

Query: 489 RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
           R+M      P  V+  SV+PACA+L A +  +++HGC++R   + +  + +SL+D YAK 
Sbjct: 317 RRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKC 376

Query: 549 GNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
           GNI  +R +FD +  +D++ W ++I G  +HG    A+ LF+ M   G++P    F++++
Sbjct: 377 GNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVL 436

Query: 609 LAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM-PIEP 667
            A S AG+VD G + F S+   + I P +EHY+A+ DL GR+G+LEEA +FI +M  ++P
Sbjct: 437 TACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMRGVQP 496

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
             S+W  LL ACR H +++LA   +++L  ++  ++    L+  IY+   + +DA ++R 
Sbjct: 497 TGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRI 556

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL-----QNVPENVTARSSH 782
             R+   + +    WIEV N V+TF+ G  S  Y D +   L     Q   E     ++ 
Sbjct: 557 HMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVIDTNQ 616

Query: 783 SGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMH 842
               ++EE K E+   HSE+LA+A+ +I S+ A  TIR++KNIR+C  CH   K+++ + 
Sbjct: 617 VLHDVDEELKRELLHNHSERLAIAYGII-STTAGTTIRVIKNIRVCADCHTAIKFITKIV 675

Query: 843 HCEIFLADSKCLHHFKNGQCSCGDYW 868
             EI + D+   HHFKNG CSCGDYW
Sbjct: 676 GREITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 166/382 (43%), Gaps = 47/382 (12%)

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
            WS++I  Y+           F  M    + P+  +FP +L+A       +    +H+  
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 184 IKLGMSCVRRVRNSVLAVYVK---CGKLI------------WARRFFESMDEKDGVAWNS 228
           ++LG+     + N+++  Y K    GK+               ++ F+ M  +D V+WN+
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196

Query: 229 MISGYFQIGENDEAHRLFDKMCRE-EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
           +I+G+ Q G   EA  +  +M +  ++K    T + ++  + +    +   E+       
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256

Query: 288 GITPDVF-------------------------------TWTCMISGFAQNGRTSQALDLF 316
           G   DVF                               +W  +I+G  QNG   + L  F
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFF 316

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
           + M    V P  V+ +S I AC  L AL++G ++H   V++GF D+  + +SL++MY+KC
Sbjct: 317 RRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKC 376

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
             ++ A  VFD I  +D+ +W ++I G    G+   A  LF  M E  V P  + +  ++
Sbjct: 377 GNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVL 436

Query: 437 SGYIQNGNEDEAVDLFQRMGKN 458
           +     G  DE    F  M ++
Sbjct: 437 TACSHAGLVDEGWRYFNSMERD 458



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/364 (21%), Positives = 173/364 (47%), Gaps = 12/364 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYI--NLLQACIDSNSIHLARKLHAF-LNLVTEIDV 91
           NG   EA+ ++  +   G K++ +++   ++L    +   ++  +++H + +    + DV
Sbjct: 204 NGMYVEALDMVREMGKNG-KLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDV 262

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           F+ + L+ +YAKC  L+ +   F  +  ++  +W+++I    ++  +   +  F  M+++
Sbjct: 263 FIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKE 322

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            + P    F  ++ AC +      G+ +H  +++LG      + +S++ +Y KCG +  A
Sbjct: 323 NVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMA 382

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R  F+ +D++D VAW ++I G    G   +A  LF+ M  + ++   V F  ++ + +  
Sbjct: 383 RYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHA 442

Query: 272 GQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  D        ME   GI P +  +  +     + GR  +A D    M   GV P G  
Sbjct: 443 GLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMR--GVQPTGSV 500

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDM 388
            +  ++AC   K++ +  ++     K+   D   +G  ++  N+YS  +  + A R+   
Sbjct: 501 WSILLAACRAHKSVELAEKVLD---KLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRIH 557

Query: 389 IKDK 392
           ++ K
Sbjct: 558 MRKK 561


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 206/630 (32%), Positives = 322/630 (51%), Gaps = 59/630 (9%)

Query: 292 DVFTWTCMISGFAQNGRTSQALD--LFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
           D+  W  M++G+A +G    A+   L  +M    + PN  T+ + +       ALA G  
Sbjct: 75  DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 134

Query: 350 IHSLAV----------KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           +H+  +          K   TD VL+G +L++MY+KC  L  A RVFD +  ++  +W++
Sbjct: 135 VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSA 194

Query: 400 MIAGYCQAGYCGKAYELFIKM------------------------------------QES 423
           +I G+       +A+ LF  M                                     +S
Sbjct: 195 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS 254

Query: 424 DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
            V  ++   N L+S Y + G  D+A+ LF  M   D     T S+++L++GY Q G+   
Sbjct: 255 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKD-----TVSYSALVSGYVQNGRAEE 309

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID 543
           A  VF+KMQ+    P+  T++S++PAC++L A    +  HG V+ R L S   + N+LID
Sbjct: 310 AFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALID 369

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGT 603
            YAK G I  SR +F+ M S+DI++WN++I GY +HG    A  LF +M + G  P+  T
Sbjct: 370 MYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVT 429

Query: 604 FLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
           F+ ++ A S +G+V  GK  F  +   Y + P +EHY  M+DL  R G L+EA EFI+ M
Sbjct: 430 FICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSM 489

Query: 664 PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDAL 723
           P+  D  +W ALL ACR++ NIDL       + +L P       L+  IY+  G+ ++A 
Sbjct: 490 PLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAA 549

Query: 724 KVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHS 783
           +VR +++    + S G  WIE+   ++ FV G  S   S  +Y  L N+   +       
Sbjct: 550 EVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQP 609

Query: 784 GLCIEEEEKEEISGI-----HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
                 ++ EE         HSEKLA+A+ ++  S+   TI + KN+R+C  CH   K++
Sbjct: 610 DTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSE-DKTIFVTKNLRVCGDCHTVIKHI 668

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S++    I + D+   HHFKNGQCSCGD+W
Sbjct: 669 SLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 205/450 (45%), Gaps = 59/450 (13%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+   L+AC      H  R +H   ++   + D+FV T LL +Y KC CL DA  +F  M
Sbjct: 12  TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 71

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVE--LFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
             R+L  W+AM+  Y+    +   V   L   M    L P+      +L      G    
Sbjct: 72  PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 131

Query: 176 GKLMHSLVIKLGMSCVRRVRNS-------------VLAVYVKCGKLIWARRFFESMDEKD 222
           G  +H+  I+   +C+   RNS             +L +Y KCG L++ARR F++M  ++
Sbjct: 132 GTSVHAYCIR---ACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 188

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCRE---------------------EIKLG---- 257
            V W+++I G+       +A  LF  M  +                      +++G    
Sbjct: 189 EVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLH 248

Query: 258 -----------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN 306
                      +   N L+  Y + G  D A+ +   M       D  +++ ++SG+ QN
Sbjct: 249 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA----VKDTVSYSALVSGYVQN 304

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           GR  +A  +FK+M    V P+  T+ S I AC+ L AL  G   H   +  G   +  + 
Sbjct: 305 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC 364

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           N+LI+MY+KC  ++ + +VF+M+  +D+ SWN+MIAGY   G   +A  LF++M     P
Sbjct: 365 NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFP 424

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMG 456
           P+ +T+  L+S    +G   E    F  MG
Sbjct: 425 PDGVTFICLLSACSHSGLVIEGKHWFHVMG 454



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 198/439 (45%), Gaps = 74/439 (16%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M++  + P+++ FP  L+AC    D   G+ +H   I  G+     V  ++L +YVKC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIG--ENDEAHRLFDKMCREEIKLGVVTFNILI 265
           L  A   F +M  +D VAWN+M++GY   G   +  AH L  +M    ++    T   L+
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 266 RSYNQLGQ----------CDVA----------------------MEMVKRMESLGITPDV 293
               Q G           C  A                      ++M  +  SL     V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 294 F---------TWTCMISGFAQNGRTSQALDLFKEMSFVGV-MPNGVTITSAISACTDLKA 343
           F         TW+ +I GF    R +QA  LFK M   G+   +  +I SA+ AC  L  
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           L MG ++H+L  K G   D+  GNSL++MY+K   ++ A  +FD +  KD  S++++++G
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-----GYIQNGNEDEA---------- 448
           Y Q G   +A+ +F KMQ  +V P+  T   LI        +Q+G               
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360

Query: 449 -------VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
                  +D++ + G+ D  +        R+  SWN++IAGY   G    A  +F +M +
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420

Query: 494 SCFYPNCVTILSVLPACAY 512
             F P+ VT + +L AC++
Sbjct: 421 LGFPPDGVTFICLLSACSH 439



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 205/468 (43%), Gaps = 56/468 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFL--------- 83
           +G  + A+  L S+  Q  ++R N  T + LL       ++     +HA+          
Sbjct: 89  HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR 148

Query: 84  NLVTEID--VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           N  +++   V + T LL +YAKCG L  AR VF+ M  RN  TWSA+IG +    R  + 
Sbjct: 149 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 208

Query: 142 VELFFLMVQDGL-FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
             LF  M+  GL F         L+AC +      G+ +H+L+ K G+       NS+L+
Sbjct: 209 FLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 268

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y K G +  A   F+ M  KD V++++++SGY Q G  +EA  +F KM    ++    T
Sbjct: 269 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAAT 328

Query: 261 F-----------------------------------NILIRSYNQLGQCDVAMEMVKRME 285
                                               N LI  Y + G+ D++ ++   M 
Sbjct: 329 MVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 388

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
           S     D+ +W  MI+G+  +G   +A  LF EM+ +G  P+GVT    +SAC+    + 
Sbjct: 389 S----RDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 444

Query: 346 MGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAG 403
            G    H +    G T  +     ++++ S+   L EA E +  M    DV  W +++ G
Sbjct: 445 EGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL-G 503

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
            C+        +   +M +   P     + +L + Y   G  DEA ++
Sbjct: 504 ACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEV 551



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 14/191 (7%)

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           PN  T    L AC+ L   +  + IH   +   L++ L V  +L+D Y K   +  +  I
Sbjct: 8   PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALD--LFDQMKSFGLKPNRGTFLSIILAHSLAG 615
           F  M ++D++ WN+++ GY  HG +H A+   L  QM+   L+PN  T ++++   +  G
Sbjct: 68  FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG 127

Query: 616 MVDLGKKV--FCSITECY--------QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
            +  G  V  +C I  C         ++   +   +A++D+Y + G L  A    + MP 
Sbjct: 128 ALAQGTSVHAYC-IRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA 186

Query: 666 EPDSSIWEALL 676
             + + W AL+
Sbjct: 187 RNEVT-WSALI 196


>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Brachypodium distachyon]
          Length = 706

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 218/710 (30%), Positives = 363/710 (51%), Gaps = 61/710 (8%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N+ +A  V+ G +  AR  F++M  +   ++N++I+GYF+    D A  LF +M   ++ 
Sbjct: 21  NARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSRDLG 80

Query: 256 LGVVTFNILIR--SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
               ++N LI   S  +    D A  +     S+ + P V ++T ++ G+ ++G  + A+
Sbjct: 81  ----SYNALIAGLSLRRHTLPDAAAALA----SIPLPPSVVSFTSLLRGYVRHGLLADAI 132

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
            LF +M       N VT T  +    D   +    E   L  +M    DV+   ++++ Y
Sbjct: 133 RLFHQMP----ERNHVTYTVLLGGFLDAGRVN---EARKLFDEMP-DKDVVARTAMLSGY 184

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
            +   +  A  +FD +  ++V SW +MI+GY Q G    A +LF  M +     N ++W 
Sbjct: 185 CQAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDR----NEVSWT 240

Query: 434 VLISGYIQNGNEDEAVDLFQRM------------------GKNDKVK--------RNTAS 467
            ++ GYIQ G+ ++A DLF  M                  G  D  K        R+  +
Sbjct: 241 AMLVGYIQAGHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCARDDGT 300

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           W+++I  Y+Q      AL  FR+M      PN  + +S+L  CA L  ++  +E+H  +L
Sbjct: 301 WSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAML 360

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           R S ++ +  +++LI  Y K GN+  ++ +F+    KD++ WNS+I GY  HG    AL 
Sbjct: 361 RCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALG 420

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           +FD ++   + P+  T++ ++ A S  G V  G+++F S+     I     HYS M+DL 
Sbjct: 421 IFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLL 480

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           GR+G ++EA++ I +MP+EPD+ IW AL+ ACR+H N ++A +A ++L +LEPG      
Sbjct: 481 GRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPGSAGPYV 540

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
           L+  IY   G+ EDA  +RK         S G  WIE   +V+ F +G   +  S   ++
Sbjct: 541 LLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCSWIEYNKMVHLFTSG---DVLSHPEHA 597

Query: 768 WLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
            + N+ E +      SG           ++EE+K +    HSE+ A+A+ L+    A   
Sbjct: 598 IILNMLEELDGLLMESGYSADGSFVLHDVDEEQKAQSLRYHSERQAVAYGLL-KVPAGMP 656

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IR++KN+R+C  CH   K ++ +   EI L D+   HHFK+G CSC DYW
Sbjct: 657 IRVMKNLRVCGDCHSAIKLITKITSREIILRDANRFHHFKDGLCSCRDYW 706



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 204/417 (48%), Gaps = 21/417 (5%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T LL  Y + G L DA  +F  M ERN  T++ ++G +    R  E  +LF  M      
Sbjct: 116 TSLLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEM------ 169

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR-NSVLAVYVKCGKLIWARR 213
           PD  +  +     G C   +AG++  +  +   M     V   ++++ Y + GK+I AR+
Sbjct: 170 PDKDVVARTAMLSGYC---QAGRITEARALFDEMPKRNVVSWTAMISGYAQNGKVILARK 226

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            FE M +++ V+W +M+ GY Q G  ++A  LF+ M        V   N ++  + Q G 
Sbjct: 227 LFEVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPDHP----VAACNAMMVGFGQHGM 282

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
            D A  M +RM       D  TW+ MI  + QN    +AL  F+EM   G+ PN  +  S
Sbjct: 283 VDAAKAMFERM----CARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFIS 338

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            ++ C  L     G E+H+  ++  F  DV   ++LI MY KC  L+ A+RVF+M + KD
Sbjct: 339 ILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKD 398

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ 453
           V  WNSMI GY Q G   +A  +F  ++ + + P+ IT+  +++     G   E  ++F 
Sbjct: 399 VVMWNSMITGYAQHGLGEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFN 458

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            MG N  ++   A ++ ++    + G  + AL +   M      P+ +   +++ AC
Sbjct: 459 SMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNMPVE---PDAIIWGALMGAC 512



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 174/407 (42%), Gaps = 77/407 (18%)

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V+  N+ I    +   +E A   FD +  +   S+N++IAGY +      A  LF +M  
Sbjct: 17  VVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPS 76

Query: 423 SD-----------------------------VPPNVITWNVLISGYIQNGNEDEAVDLFQ 453
            D                             +PP+V+++  L+ GY+++G   +A+ LF 
Sbjct: 77  RDLGSYNALIAGLSLRRHTLPDAAAALASIPLPPSVVSFTSLLRGYVRHGLLADAIRLFH 136

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
           +M      +RN  ++  L+ G+   G+ N A  +F +M      P+   +        Y 
Sbjct: 137 QM-----PERNHVTYTVLLGGFLDAGRVNEARKLFDEM------PDKDVVARTAMLSGYC 185

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMN-----SLIDTYAKSGNIVYSRTIFDGMSSKDIIT 568
            A  ++ E       R+L   +P  N     ++I  YA++G ++ +R +F+ M  ++ ++
Sbjct: 186 QA-GRITEA------RALFDEMPKRNVVSWTAMISGYAQNGKVILARKLFEVMPDRNEVS 238

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF---C 625
           W +++ GY+  G    A DLF+ M    +        ++++     GMVD  K +F   C
Sbjct: 239 WTAMLVGYIQAGHVEDAEDLFNAMPDHPVAACN----AMMVGFGQHGMVDAAKAMFERMC 294

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLTACRIH 682
           +  +          +SAMI +Y ++  L EA+    +M    I P+ + + ++LT C   
Sbjct: 295 ARDDGT--------WSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAAL 346

Query: 683 GNID----LAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
              D    L    +   FD    DV     ++ +Y  CG  + A +V
Sbjct: 347 ATADYGRELHAAMLRCSFDT---DVFAVSALITMYIKCGNLDKAKRV 390



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 10/258 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           N  L EA++    +  +G +    ++I++L  C    +    R+LHA  L    + DVF 
Sbjct: 311 NEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELHAAMLRCSFDTDVFA 370

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+++Y KCG LD A+ VF     +++  W++MI  Y++     E + +F  +    +
Sbjct: 371 VSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMITGYAQHGLGEEALGIFDDLRLARM 430

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV----KCGKLI 209
            PD   +  +L AC   G  + G+    +   +GM+   R+  +  +  V    + G + 
Sbjct: 431 APDGITYIGVLTACSYTGKVKEGR---EIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVD 487

Query: 210 WARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
            A     +M  E D + W +++ G  ++ +N E   +  K   E        + +L   Y
Sbjct: 488 EALDLINNMPVEPDAIIWGALM-GACRMHKNAEIAEVAAKKLLELEPGSAGPYVLLSHIY 546

Query: 269 NQLGQCDVAMEMVKRMES 286
              G+ + A +M K + S
Sbjct: 547 TSTGRWEDASDMRKFISS 564



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 18/212 (8%)

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           L  S   ++   N+ I    ++GNI  +R  FD M  +   ++N+LI GY  +    AAL
Sbjct: 9   LPSSTAPAVVAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAAL 68

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSL-AGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
            LF +M S  L    G++ ++I   SL    +        SI     + P +  +++++ 
Sbjct: 69  GLFHRMPSRDL----GSYNALIAGLSLRRHTLPDAAAALASIP----LPPSVVSFTSLLR 120

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG-DVL 704
            Y R G L +A+     MP E +   +  LL      G ++ A     +LFD  P  DV+
Sbjct: 121 GYVRHGLLADAIRLFHQMP-ERNHVTYTVLLGGFLDAGRVNEA----RKLFDEMPDKDVV 175

Query: 705 IQRLILQIYAICGKPEDALKVRKLERENTRRN 736
            +  +L  Y   G+  +A   R L  E  +RN
Sbjct: 176 ARTAMLSGYCQAGRITEA---RALFDEMPKRN 204


>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 203/590 (34%), Positives = 316/590 (53%), Gaps = 18/590 (3%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            P+ F    M+  +A  GR+ +A+DL+  M  +GV  N  T    +  C        G  
Sbjct: 94  APNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEV 153

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H   V+ GF  D+ V  +L++MY+KC E+  A  VFD +  +DV  W +MI  Y QA  
Sbjct: 154 VHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAER 213

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD----LFQRMGKNDKVKRNT 465
             KA  LF KMQE     + IT   + S   Q G+   A+     +F RM      +RN 
Sbjct: 214 PLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISRARLVFDRME-----ERNG 268

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
            SWNS+++GY Q G+  +AL +F +MQ+S   PN VT L ++ AC+YL + +  +++H  
Sbjct: 269 ISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNF 328

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG--MSSKDIITWNSLICGYVLHGFWH 583
           V+   ++    + N+++D Y K G++  +  +F+   +  +D+ +WN LI GY +HG   
Sbjct: 329 VISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGK 388

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            AL+LF +M+  G++PN  TF SI+ A S AG++D G+K F  +T+   + P ++HY+ M
Sbjct: 389 EALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKL-SVRPEMKHYACM 447

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           +D+ GR+G L EA   I+ +P  P   +W ALL ACRIHGN +L  +A   LF LEP   
Sbjct: 448 VDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHT 507

Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
               L+  IYA   K ++   VR+  +    +       IE    V+ F T   S  Y  
Sbjct: 508 GYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYR 567

Query: 764 LLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
            +Y  ++++   +        L      +E E+KE +   HSEKLA+AF ++   Q    
Sbjct: 568 EVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYHSEKLAVAFGIMKMDQG-MP 626

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           I++ KN+R+C  CH   K++S ++  +I + D    HHF+ G+CSCGDYW
Sbjct: 627 IQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGGRCSCGDYW 676



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 132/524 (25%), Positives = 217/524 (41%), Gaps = 87/524 (16%)

Query: 17  TKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA 76
           T+  N    +T L      GR  EAI +   +   G  V   TY  +L+ C         
Sbjct: 92  TQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFG 151

Query: 77  RKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
             +H   +      D+FV+  L+ +YAKCG + DA EVF+ M  R++  W+AMI  Y + 
Sbjct: 152 EVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQA 211

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
           +R  + + LF  M ++G   D+     +  A G  GD              G   + R  
Sbjct: 212 ERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGD--------------GRMAISR-- 255

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
                          AR  F+ M+E++G++WNSM+SGY Q G   +A  LF++M   E  
Sbjct: 256 ---------------ARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECD 300

Query: 256 LGVVTFNILIRS-----------------------------------YNQLGQCDVAMEM 280
              VT  I++ +                                   Y + G  D A+EM
Sbjct: 301 PNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEM 360

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
               E LG   DV +W  +ISG+  +G   +AL+LF  M   GV PN +T TS +SAC+ 
Sbjct: 361 FNNCE-LG-ERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSH 418

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS-WNS 399
              +  G +  +   K+    ++     +++M  +   L  A R+   I  +     W +
Sbjct: 419 AGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGA 478

Query: 400 M-----IAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQR 454
           +     I G  + G    A  LF       + P    + VL+S      N+ + V++ ++
Sbjct: 479 LLLACRIHGNTELGEIA-ANNLF------QLEPEHTGYYVLMSNIYAASNKWKEVEMVRQ 531

Query: 455 MGKNDKVKRNTA----SWNSLIAGYQQLGQKNNAL-GVFRKMQS 493
             K+  +K+  A     + + + G+    Q +     V+RK++S
Sbjct: 532 NMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVES 575



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 174/419 (41%), Gaps = 81/419 (19%)

Query: 335 ISACTDLKALAMGMEIHSLAVKMGF---TDDVLVGNSLINMYSKCEELEAAERVFD---- 387
           +  CT L  L +   IHS     GF   T   L    LI +YSK  +L +A  +FD    
Sbjct: 32  LQCCTSLTTLKL---IHSSLSTRGFLLHTPHFLA--RLIILYSKLGDLHSARTLFDHRHH 86

Query: 388 ----MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS------ 437
                 +  + +  N+M+  Y  AG   +A +L+I MQ   V  N  T+  ++       
Sbjct: 87  HHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASEL 146

Query: 438 ----GYIQNGN------------EDEAVDLFQRMGK--------NDKVKRNTASWNSLIA 473
               G + +G             E   VD++ + G+        +  + R+   W ++I 
Sbjct: 147 GAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMIT 206

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
            Y+Q  +   AL +FRKMQ   F  + +T +SV  A   L                    
Sbjct: 207 LYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMA-------------- 252

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
                            I  +R +FD M  ++ I+WNS++ GY  +G    AL LF+QM+
Sbjct: 253 -----------------ISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ 295

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
           +    PN  T L ++ A S  G   LG+K+   +      I      +A++D+Y + G L
Sbjct: 296 ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLR-NAIMDMYMKCGDL 354

Query: 654 EEAMEFIEDMPI-EPDSSIWEALLTACRIHGNIDLAVLAIERLF--DLEPGDVLIQRLI 709
           + A+E   +  + E D S W  L++   +HG+   A+    R+    +EP D+    ++
Sbjct: 355 DTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSIL 413


>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 742

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 225/724 (31%), Positives = 363/724 (50%), Gaps = 92/724 (12%)

Query: 155 PDDFLFPKILQACGNCG-DFEAGKLMHSLVIK-LGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           PD F F  + + C   G     G+++H+   + L  S V  + + ++ +Y + G    AR
Sbjct: 101 PDAFTFHFLFKCCARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDAR 160

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           R F+    KD VAW ++ISG  ++G  D+A RL   + R  ++                 
Sbjct: 161 RAFDEASVKDVVAWTTVISGLAKMGLLDDARRL---LARAPVR----------------- 200

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
                              +V TWT +ISG+++ GR ++A+D F  M   G+ P+ VT+ 
Sbjct: 201 -------------------NVVTWTGLISGYSRAGRAAEAVDCFNSMLSDGIAPDEVTVI 241

Query: 333 SAISACTDLKALAMGMEIHSLA--VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
             +SAC  LK L  G  +H L    +M  +D ++V  +LI+MY+KC              
Sbjct: 242 GMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVV--ALIDMYAKC-------------- 285

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
                            G  G+A E+F  +     P     WN +I GY + G+ D A  
Sbjct: 286 -----------------GDTGRAREVFDALGRGRGPQ---PWNAMIDGYCKVGHVDIARS 325

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           LF +M  +D +     ++NSLI GY   G+   AL +F KM+      +  T++ +L A 
Sbjct: 326 LFDQMEDHDVI-----TFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTAS 380

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
           A L A  + + +H C+ +R +E  + +  +L+D Y K G +  +   F  MS +D+ TW+
Sbjct: 381 ASLGALPQGRALHACIEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWS 440

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC 630
           ++I G   +G   AAL+ F  MK  G   N  T+++++ A S + ++D G+  F  +   
Sbjct: 441 AMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLL 500

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
           + I P IEHY  MIDL GRSG L+EAM+ ++ MP++P++ IW ++L+ACR+H N+DLA  
Sbjct: 501 HNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQN 560

Query: 691 AIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVY 750
           A   L  LEP +  +   +  IY    + EDA K+R+L  +   + + G   I V   V+
Sbjct: 561 AAHHLLKLEPAEDAVYVQMYNIYIDSRQWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVH 620

Query: 751 TFVTGGWSESYSDLLYSWLQNVPENVTAR-----SSHSGLCIEEEEKEEISGIHSEKLAL 805
            F+ G  S      +   ++ +   + +      +S   + ++EEEKE+    HSEKLA+
Sbjct: 621 KFIVGDRSHPQIAEIVVMMEEIGRRLKSAGYSPITSQITVDVDEEEKEQALLAHSEKLAI 680

Query: 806 AFALIGSSQAPH-TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
           AF L+  S AP+  + I+KN+R+C  CH   K +S + + EI + D    HHF+ G CSC
Sbjct: 681 AFGLV--SLAPNLPVHIIKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFRGGVCSC 738

Query: 865 GDYW 868
            D+W
Sbjct: 739 NDFW 742



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 189/422 (44%), Gaps = 43/422 (10%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DV   T ++S  AK G LDDAR +      RN+ TW+ +I  YSR  R  E V+ F  M+
Sbjct: 170 DVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCFNSML 229

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            DG+ PD+     +L ACG   D   G  +H LV    M    ++  +++ +Y KCG   
Sbjct: 230 SDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTG 289

Query: 210 WARRFFESMDEKDGV-AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
            AR  F+++    G   WN+MI GY ++G  D A  LFD+M   +    V+TFN LI  Y
Sbjct: 290 RAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHD----VITFNSLITGY 345

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
              G+   A+ +  +M   G+  D FT   +++  A                 +G +P G
Sbjct: 346 IHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASAS----------------LGALPQG 389

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
                A+ AC + + +                 DV +G +L++MY KC  +E A   F  
Sbjct: 390 ----RALHACIEQRLV---------------ERDVYLGTALLDMYMKCGRVEEAMVAFKQ 430

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           +  +DV++W++MI G    G    A E F  M+      N +T+  +++    +   DE 
Sbjct: 431 MSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEG 490

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
              F  M     ++     +  +I    + G  + A+ + + M      PN V   S+L 
Sbjct: 491 RLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLLDEAMDLVQTMP---MQPNAVIWASILS 547

Query: 509 AC 510
           AC
Sbjct: 548 AC 549



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 185/402 (46%), Gaps = 15/402 (3%)

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA-LAMGMEIHSLAV 355
           T + + F  +    + + L++ M  V V P+  T       C    A + +G  +H+   
Sbjct: 72  TALRACFRASSGPDRPIILYRRMHGVDVPPDAFTFHFLFKCCARGGAHVLLGRMLHAACF 131

Query: 356 KMGFTDDV-LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           +      V L+ + +I+MY++      A R FD    KDV +W ++I+G  + G    A 
Sbjct: 132 RTLLPSAVPLIASPIIHMYAELGLPGDARRAFDEASVKDVVAWTTVISGLAKMGLLDDAR 191

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
            L  +        NV+TW  LISGY + G   EAVD F  M  +D +  +  +   +++ 
Sbjct: 192 RLLARAPVR----NVVTWTGLISGYSRAGRAAEAVDCFNSM-LSDGIAPDEVTVIGMLSA 246

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS 534
             QL   N    +   +       +   +++++   A    + + +E+   + R      
Sbjct: 247 CGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKCGDTGRAREVFDALGRGRGPQP 306

Query: 535 LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
               N++ID Y K G++  +R++FD M   D+IT+NSLI GY+  G    AL LF +M+ 
Sbjct: 307 ---WNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGYIHGGRLREALLLFTKMRR 363

Query: 595 FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLE 654
            GL  +  T + ++ A +  G +  G+ +   I E   +   +   +A++D+Y + G++E
Sbjct: 364 HGLGADNFTMVGLLTASASLGALPQGRALHACI-EQRLVERDVYLGTALLDMYMKCGRVE 422

Query: 655 EAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF 696
           EAM   + M +  D   W A++     +G   +   A+E  F
Sbjct: 423 EAMVAFKQMSVR-DVHTWSAMIGGLAFNG---MGKAALEHFF 460



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 173/417 (41%), Gaps = 42/417 (10%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN----------L 85
           GR  EA+   +S+ + G      T I +L AC     ++    LH  +           +
Sbjct: 216 GRAAEAVDCFNSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLV 275

Query: 86  VTEIDVFVK-----------------------TKLLSVYAKCGCLDDAREVFEDMRERNL 122
           V  ID++ K                         ++  Y K G +D AR +F+ M + ++
Sbjct: 276 VALIDMYAKCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDV 335

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            T++++I  Y    R RE + LF  M + GL  D+F    +L A  + G    G+ +H+ 
Sbjct: 336 ITFNSLITGYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHAC 395

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           + +  +     +  ++L +Y+KCG++  A   F+ M  +D   W++MI G    G    A
Sbjct: 396 IEQRLVERDVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAA 455

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMIS 301
              F  M  +      VT+  ++ + +     D        M  L  I P +  + CMI 
Sbjct: 456 LEHFFWMKCDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMID 515

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
              ++G   +A+DL + M    + PN V   S +SAC   K + +        +K+   +
Sbjct: 516 LLGRSGLLDEAMDLVQTMP---MQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAE 572

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
           D  V   + N+Y    + E A ++  +++ + V       AGY      G+ ++  +
Sbjct: 573 DA-VYVQMYNIYIDSRQWEDASKIRRLMEKRGVKK----TAGYSSIAVAGQVHKFIV 624



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 92/404 (22%), Positives = 169/404 (41%), Gaps = 43/404 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
            GRL EA+ +   +   G      T + LL A     ++   R LHA +   + E DV++
Sbjct: 348 GGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDVYL 407

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T LL +Y KCG +++A   F+ M  R+++TWSAMIG  + +   +  +E FF M  DG 
Sbjct: 408 GTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHFFWMKCDGF 467

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV------LAVYVKCGK 207
             +   +  +L AC +    + G+L         M  +  +R  +      + +  + G 
Sbjct: 468 HANSVTYIAVLTACSHSCLLDEGRLYFD-----EMRLLHNIRPQIEHYGCMIDLLGRSGL 522

Query: 208 LIWARRFFESMD-EKDGVAWNSMISG-----YFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           L  A    ++M  + + V W S++S         + +N   H L  K+   E  + V  +
Sbjct: 523 LDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLL--KLEPAEDAVYVQMY 580

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG----FAQNGRTSQAL---- 313
           NI I S     Q + A ++ + ME  G+       +  ++G    F    R+   +    
Sbjct: 581 NIYIDSR----QWEDASKIRRLMEKRGVKKTAGYSSIAVAGQVHKFIVGDRSHPQIAEIV 636

Query: 314 ----DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN-- 367
               ++ + +   G  P    ITS I+   D +     +  HS  + + F    L  N  
Sbjct: 637 VMMEEIGRRLKSAGYSP----ITSQITVDVDEEEKEQALLAHSEKLAIAFGLVSLAPNLP 692

Query: 368 -SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
             +I     CE+  +A ++   + ++++   +     + + G C
Sbjct: 693 VHIIKNLRVCEDCHSAIKLISRLWNREIIVRDRSRFHHFRGGVC 736


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 238/816 (29%), Positives = 401/816 (49%), Gaps = 94/816 (11%)

Query: 139 REVVELFFLMVQDGLFP-DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
           R  V    LM +DG+ P D   F  +L++C    DF  GKL+H+ +I+  +     + NS
Sbjct: 43  RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102

Query: 198 VLAVYVKCGKLIWARRFFESM---DEKDGVAWNSMISGYFQIGENDEAHRLF-------- 246
           ++++Y K G    A   FE+M    ++D V+W++M++ Y   G   +A ++F        
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162

Query: 247 --DKMC----------REEIKLGVVTFNILIRSYNQLGQ----CDVAMEMVKRMESLGIT 290
             +  C           + + +G VT   L+++ +        C +    VK   S    
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222

Query: 291 PDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
             VF         TWT MI+   Q G   +A+  F +M   G   +  T++S  SAC +L
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE---ELEAAERVFDMIKDKDVYSWN 398
           + L++G ++HS A++ G  DDV    SL++MY+KC     ++   +VFD ++D  V SW 
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340

Query: 399 SMIAGYCQ-AGYCGKAYELFIKM-QESDVPPNVITW------------------------ 432
           ++I GY +      +A  LF +M  +  V PN  T+                        
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400

Query: 433 -----------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK 481
                      N +IS ++++   ++A   F+ + +     +N  S+N+ + G  +    
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSE-----KNLVSYNTFLDGTCRNLNF 455

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
             A  +  ++       +  T  S+L   A + +  K ++IH  V++  L  + PV N+L
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
           I  Y+K G+I  +  +F+ M ++++I+W S+I G+  HGF    L+ F+QM   G+KPN 
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
            T+++I+ A S  G+V  G + F S+ E ++I P +EHY+ M+DL  R+G L +A EFI 
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPED 721
            MP + D  +W   L ACR+H N +L  LA  ++ +L+P +      +  IYA  GK E+
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695

Query: 722 ALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT--AR 779
           + ++R+  +E       G  WIEV + ++ F  G  +   +  +Y  L  +   +     
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755

Query: 780 SSHSGLCIEE-------EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCH 832
              + L + +        EKE +   HSEK+A+AF LI +S++   +R+ KN+R+C  CH
Sbjct: 756 VPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKS-RPVRVFKNLRVCGDCH 814

Query: 833 ETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              KY+S +   EI L D    HHFK+G+CSC DYW
Sbjct: 815 NAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 158/642 (24%), Positives = 288/642 (44%), Gaps = 83/642 (12%)

Query: 36  GRLNEAITVLDSIATQGAKVRRN-TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           G L  A++ LD +A  G +   + T+ +LL++CI +    L + +HA  +    E D  +
Sbjct: 40  GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMR---ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
              L+S+Y+K G    A +VFE MR   +R++ +WSAM+  Y  + R  + +++F   ++
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRRVRNSVLAVYVKC-GKL 208
            GL P+D+ +  +++AC N      G++    ++K G       V  S++ ++VK     
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC------------------ 250
             A + F+ M E + V W  MI+   Q+G   EA R F  M                   
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279

Query: 251 --REEIKLGVVTFNILIRS-------------YNQL---GQCDVAMEMVKRMESLGITPD 292
              E + LG    +  IRS             Y +    G  D   ++  RME       
Sbjct: 280 AELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMED----HS 335

Query: 293 VFTWTCMISGFAQN-GRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEI 350
           V +WT +I+G+ +N    ++A++LF EM   G V PN  T +SA  AC +L    +G ++
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
              A K G   +  V NS+I+M+ K + +E A+R F+ + +K++ S+N+ + G C+    
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGY-----IQNGNE-----------------DEA 448
            +A++L  ++ E ++  +  T+  L+SG      I+ G +                 +  
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515

Query: 449 VDLFQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           + ++ + G  D           RN  SW S+I G+ + G     L  F +M      PN 
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575

Query: 501 VTILSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
           VT +++L AC+++ + S   +  +       ++  +     ++D   ++G +  +    +
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635

Query: 560 GMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
            M    D++ W + +    +H   +  L      K   L PN
Sbjct: 636 TMPFQADVLVWRTFLGACRVHS--NTELGKLAARKILELDPN 675



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 213/467 (45%), Gaps = 41/467 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT--EIDVF 92
           NGR  +AI V       G       Y  +++AC +S+ + + R    FL      E DV 
Sbjct: 144 NGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVC 203

Query: 93  VKTKLLSVYAKC-GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           V   L+ ++ K     ++A +VF+ M E N+ TW+ MI    +    RE +  F  MV  
Sbjct: 204 VGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS 263

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC---GKL 208
           G   D F    +  AC    +   GK +HS  I+ G+  V  V  S++ +Y KC   G +
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSV 321

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQ-IGENDEAHRLFDKMCRE-EIKLGVVTFNILIR 266
              R+ F+ M++   ++W ++I+GY +      EA  LF +M  +  ++    TF+   +
Sbjct: 322 DDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFK 381

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT----------------- 309
           +   L    V  +++ +    G+  +      +IS F ++ R                  
Sbjct: 382 ACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS 441

Query: 310 --------------SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
                          QA  L  E++   +  +  T  S +S   ++ ++  G +IHS  V
Sbjct: 442 YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV 501

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K+G + +  V N+LI+MYSKC  ++ A RVF+ +++++V SW SMI G+ + G+  +  E
Sbjct: 502 KLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLE 561

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
            F +M E  V PN +T+  ++S     G   E    F  M ++ K+K
Sbjct: 562 TFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK 608



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 162/345 (46%), Gaps = 22/345 (6%)

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDM-----IKDKDVYSWNSMIAGYCQAGYCGKAY 414
           ++ + V + LI  +    +L  A    D+     I+  D  +++S++    +A       
Sbjct: 23  SNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGK 82

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
            +  ++ E D+ P+ + +N LIS Y ++G+  +A D+F+ M +  K  R+  SW++++A 
Sbjct: 83  LVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGK--RDVVSWSAMMAC 140

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS-LES 533
           Y   G++ +A+ VF +       PN     +V+ AC+        +   G +++    ES
Sbjct: 141 YGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFES 200

Query: 534 SLPVMNSLIDTYAKSGN-IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
            + V  SLID + K  N    +  +FD MS  +++TW  +I   +  GF   A+  F  M
Sbjct: 201 DVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM 260

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR--- 649
              G + ++ T  S+  A +    + LGK++         ++  +E   +++D+Y +   
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS-GLVDDVE--CSLVDMYAKCSA 317

Query: 650 SGKLEEAMEFIEDMPIEPDSSI--WEALLTACRIHGNIDLAVLAI 692
            G +++  +  + M    D S+  W AL+T      N +LA  AI
Sbjct: 318 DGSVDDCRKVFDRM---EDHSVMSWTALITG--YMKNCNLATEAI 357


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 246/856 (28%), Positives = 422/856 (49%), Gaps = 54/856 (6%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           R T   +L+ C+ S  +  +   H +   +  + D FV   L+++Y K G + + R +FE
Sbjct: 152 RMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFE 211

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
           +M  R++  W+ M+ AY       E ++L       GL P++     + +  G+  D EA
Sbjct: 212 EMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGD--DSEA 269

Query: 176 GKLMHSLVIKLGMSCVRRV--RNSVLAVYVKCGKLIWARRFFESMDEKD----GVAWNSM 229
           G++  S       S V  +  RN +L+ Y+  G+     + F  M E D     V +  +
Sbjct: 270 GQV-KSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILV 328

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           ++   ++       ++     +  + L +   N LI  Y +L +  +A  +   M     
Sbjct: 329 LATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSE--- 385

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL-KALAMGM 348
             D+ +W  +I+G AQ+    +A+ LF ++   G+ P+  T+TS + A + L + L++  
Sbjct: 386 -RDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSK 444

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           +IH  A+K     D  V  +LI+ YS+   ++ AE +F    + D+ +WN+M++GY Q+ 
Sbjct: 445 QIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSH 503

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLIS--GYIQNGNEDEAV----------------- 449
              K  ELF  M +     +  T   ++   G++   N+ + V                 
Sbjct: 504 DGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 563

Query: 450 ---DLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
              D++ + G     +         +  +W +LI+G  + G++  AL VF +M+     P
Sbjct: 564 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLP 623

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           +  TI ++  A + L A  + ++IH   L+ +  S   V  SL+D YAK G+I  +  +F
Sbjct: 624 DEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLF 683

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
             +   +I  WN+++ G   HG    AL LF QM+S G+KP++ TF+ ++ A S +G+V 
Sbjct: 684 KRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVS 743

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
              K   S+   Y I P IEHYS + D  GR+G ++EA   I+ M +E  +S++  LL A
Sbjct: 744 EAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAA 803

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
           CR+ G+ +       +L +LEP D     L+  +YA   K ++    R + + +  +   
Sbjct: 804 CRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDP 863

Query: 739 GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKE 793
           G  WIEVKN ++ FV    S   ++L+Y  ++++      E     +  + + +EEEEKE
Sbjct: 864 GFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKE 923

Query: 794 EISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
                HSEKLA+AF L+  S  P T IR++KN+R+C  CH   KY+S ++  EI L D+ 
Sbjct: 924 RALYYHSEKLAVAFGLL--STPPSTPIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDAN 981

Query: 853 CLHHFKNGQCSCGDYW 868
             H FK+G CSCGDYW
Sbjct: 982 RFHRFKDGICSCGDYW 997



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 176/671 (26%), Positives = 318/671 (47%), Gaps = 67/671 (9%)

Query: 63  LLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
            L+  I ++ + L +  HA  L L    + F+   L+S+Y+KCG L  AR VF+ M ER+
Sbjct: 52  FLRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERD 111

Query: 122 LYTWSAMIGAYSRD-----QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           L +W++++ AY++      +  +E   LF ++ QD ++        +L+ C + G   A 
Sbjct: 112 LVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCAS 171

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           +  H    K+G+     V  +++ +Y+K GK+   R  FE M  +D V WN M+  Y ++
Sbjct: 172 ESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEM 231

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES---LGITPDV 293
           G  +EA  L        +    +T  +L R    +   D     VK  E+        ++
Sbjct: 232 GFKEEAIDLSSAFHTSGLHPNEITLRLLSR----ISGDDSEAGQVKSFENGNDASAVSEI 287

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            +   ++SG+   G+ S  L  F +M    +  + VT    ++    L +LA+G ++H +
Sbjct: 288 ISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCM 347

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
           A+K+G    + V NSLINMY K  ++  A  VF+ + ++D+ SWNS+IAG  Q+    +A
Sbjct: 348 ALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEA 407

Query: 414 YELFIKMQESDVPPN----------------------------VITWNV--------LIS 437
             LF+++    + P+                            + T NV        LI 
Sbjct: 408 VCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALID 467

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
            Y +N    EA  LF   G+N+    +  +WN++++GY Q    +  L +F  M      
Sbjct: 468 AYSRNRCMKEAEVLF---GRNN---FDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGER 521

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
            +  T+ +VL  C +L A N+ K++H   ++   +  L V + ++D Y K G++  ++  
Sbjct: 522 SDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 581

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           FD +   D + W +LI G + +G    AL +F QM+  G+ P+  T  ++  A S    +
Sbjct: 582 FDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 641

Query: 618 DLGKKVFCSITE--CYQIIPMIEHYSAMIDLYGRSGKLEEA---MEFIEDMPIEPDSSIW 672
           + G+++  +  +  C    P +   ++++D+Y + G +++A    + IE M I    + W
Sbjct: 642 EQGRQIHANALKLNCTS-DPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMMNI----TAW 694

Query: 673 EALLTACRIHG 683
            A+L     HG
Sbjct: 695 NAMLVGLAQHG 705



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 208/469 (44%), Gaps = 47/469 (10%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACID-SNSIHLARKLHAFLNLVTEI-DVFVKTKL 97
           EA+ +   +   G K    T  ++L+A       + L++++H        + D FV T L
Sbjct: 406 EAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTAL 465

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           +  Y++  C+ +A EV       +L  W+AM+  Y++     + +ELF LM + G   DD
Sbjct: 466 IDAYSRNRCMKEA-EVLFGRNNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDD 524

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
           F    +L+ CG       GK +H+  IK G      V + +L +YVKCG +  A+  F+S
Sbjct: 525 FTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS 584

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--------------------CREEIKLG 257
           +   D VAW ++ISG  + GE + A  +F +M                    C   ++ G
Sbjct: 585 IPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG 644

Query: 258 ------VVTFNI---------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
                  +  N          L+  Y + G  D A  + KR+E + IT     W  M+ G
Sbjct: 645 RQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT----AWNAMLVG 700

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFTD 361
            AQ+G   +AL LFK+M  +G+ P+ VT    +SAC+    ++   + I S+    G   
Sbjct: 701 LAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKP 760

Query: 362 DVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
           ++   + L +   +   ++ AE + D M  +     + +++A     G       +  K+
Sbjct: 761 EIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKL 820

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
            E  + P   +  VL+S      ++ + + L + M K  KVK++   SW
Sbjct: 821 LE--LEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSW 867


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 239/873 (27%), Positives = 409/873 (46%), Gaps = 95/873 (10%)

Query: 76   ARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY 132
            AR++H ++    L++  +VFV T LL  Y   G + +A ++FE++ E N+ +W++++  Y
Sbjct: 268  ARQIHGYVVKCGLMS--NVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCY 325

Query: 133  SRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR 192
            + +   +EV+ ++  +  +GL         +++ CG  GD   G  +   VIK G+    
Sbjct: 326  ADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSS 385

Query: 193  -RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR 251
              V NS+++++     +  A R F +M E+D ++WNS+I+     G  +E+   F  M R
Sbjct: 386  VSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRR 445

Query: 252  EEIKLGVVTF-----------------------------------NILIRSYNQLGQCDV 276
               K   +T                                    N L+  Y Q G  + 
Sbjct: 446  THPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSED 505

Query: 277  AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
            A  +   M +     D+ +W  M++   ++G+ S A+ L  EM       N VT T+A+S
Sbjct: 506  AELVFHTMPA----RDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALS 561

Query: 337  ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
            AC +L+ L +   +H+  +      ++++GN+L+ MY K   ++ A++V  ++ ++DV +
Sbjct: 562  ACYNLEKLKI---VHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVT 618

Query: 397  WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT------------------------- 431
            WN++I G+          + F  M+   +  N IT                         
Sbjct: 619  WNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHI 678

Query: 432  -----------WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
                        + LI+ Y Q G+ + +  +F  +       +N+++WN++ +     G 
Sbjct: 679  VVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLAN-----KNSSTWNAIFSANAHYGP 733

Query: 481  KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
               AL    +M++     +  +    L     L   ++ +++H  +++   E    V+N+
Sbjct: 734  GEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNA 793

Query: 541  LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
             +D Y K G I     I      +   +WN LI     HGF+  A + F +M   GLKP+
Sbjct: 794  TMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPD 853

Query: 601  RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
              TF+S++ A S  G+VD G   F S+T  + +   IEH   +IDL GRSG+L EA  FI
Sbjct: 854  HVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFI 913

Query: 661  EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
            + MP+ P+  +W +LL AC++HGN++L   A +RLF+L   D     L   + A   +  
Sbjct: 914  DKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWG 973

Query: 721  DALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PEN 775
            D   VRK     + +      WI++KN V TF  G      S  +Y+ L+ +      E 
Sbjct: 974  DVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEG 1033

Query: 776  VTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETA 835
                +S++    +EE+KE     HSE++ALAF LI S++    +RI KN+R+C  CH   
Sbjct: 1034 HMPDTSYALQDTDEEQKEHNLWNHSERIALAFGLINSAEGS-PLRIFKNLRVCGDCHSVF 1092

Query: 836  KYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            K VS +   +I + DS   HHF  G+CSC DYW
Sbjct: 1093 KLVSKIVGRKIVVRDSYRFHHFHGGKCSCSDYW 1125



 Score =  206 bits (523), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 168/707 (23%), Positives = 309/707 (43%), Gaps = 82/707 (11%)

Query: 75  LARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYS 133
           + + LHA  +  V + + F    L+++Y+K G +  A+ VF+ M +RN  +W+ MI  + 
Sbjct: 165 VGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFV 224

Query: 134 RDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVR 192
           R   + + ++ F  M ++G+ P  ++   ++ AC   G   E  + +H  V+K G+    
Sbjct: 225 RVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNV 284

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
            V  S+L  Y   G +  A + FE ++E + V+W S++  Y   G   E   ++  +   
Sbjct: 285 FVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHN 344

Query: 253 EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP--------------------- 291
            +     T   +IR+    G   +  +++  +   G+                       
Sbjct: 345 GLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEE 404

Query: 292 -----------DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
                      D  +W  +I+  A NGR  ++L  F  M       + +TI++ + AC  
Sbjct: 405 ASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGS 464

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
            + L  G  +H L  K G   +V V NSL++MY++    E AE VF  +  +D+ SWNSM
Sbjct: 465 AQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSM 524

Query: 401 IAGYCQAGYCGKAYELFIKMQESD--------------------------------VPPN 428
           +A + + G    A  L ++M ++                                 V  N
Sbjct: 525 MASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKIVHAFVIHFAVHHN 584

Query: 429 VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
           +I  N L++ Y + G  DEA  + + M + D V     +WN+LI G+      N  +  F
Sbjct: 585 LIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVV-----TWNALIGGHADDKDPNATIQAF 639

Query: 489 RKMQSSCFYPNCVTILSVLPACA---YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
             M+      N +TI+++L  C    YL+       IH  ++    E    V +SLI  Y
Sbjct: 640 NLMRREGLLSNYITIVNLLGTCMSPDYLLKHG--MPIHAHIVVAGFELDTYVQSSLITMY 697

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
           A+ G++  S  IFD +++K+  TWN++      +G    AL    +M++ G+  ++ +F 
Sbjct: 698 AQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFS 757

Query: 606 SIILAHSLAGMVDLGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
             +       ++D G+++   I +  +++   +   +A +D+YG+ G++++    +    
Sbjct: 758 VALATIGNLTVLDEGQQLHSWIIKLGFELDEYV--LNATMDMYGKCGEIDDVFRILPIPK 815

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFD--LEPGDVLIQRLI 709
           I    S W  L++A   HG    A  A   + D  L+P  V    L+
Sbjct: 816 IRSKRS-WNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLL 861



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 148/327 (45%), Gaps = 6/327 (1%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSI-HLARKLHAFLNLVT-EIDVFVKTK 96
           N  I   + +  +G      T +NLL  C+  + +      +HA + +   E+D +V++ 
Sbjct: 633 NATIQAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSS 692

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+++YA+CG L+ +  +F+ +  +N  TW+A+  A +      E ++    M  DG+  D
Sbjct: 693 LITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLD 752

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            F F   L   GN    + G+ +HS +IKLG      V N+ + +Y KCG++    R   
Sbjct: 753 QFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILP 812

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
               +   +WN +IS   + G   +A   F +M    +K   VTF  L+ + +  G  D 
Sbjct: 813 IPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDE 872

Query: 277 AMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            +     M S  G+   +    C+I    ++GR ++A     +M    V PN     S +
Sbjct: 873 GLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMP---VPPNEFVWRSLL 929

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDD 362
           +AC     L +G +      ++  +DD
Sbjct: 930 AACKVHGNLELGRKAADRLFELNSSDD 956



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 88/161 (54%), Gaps = 3/161 (1%)

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
           N  K +H   ++  ++ +    N+L++ Y+K G+I Y++ +FD M  ++  +WN++I G+
Sbjct: 164 NVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGF 223

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG-MVDLGKKVFCSITECYQIIP 635
           V  G++H A+  F  M   G+ P+     S++ A   +G M +  +++   + +C  ++ 
Sbjct: 224 VRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKC-GLMS 282

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
            +   ++++  YG  G + EA +  E++  EP+   W +L+
Sbjct: 283 NVFVGTSLLHFYGTHGSVSEANKLFEEIE-EPNIVSWTSLM 322


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  345 bits (885), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 211/647 (32%), Positives = 330/647 (51%), Gaps = 49/647 (7%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N L+  Y++ G+ D A+++   M       ++ +WT MISG +QN + S+A+  F  M  
Sbjct: 44  NHLVNMYSKCGELDHALKLFDTMPQ----RNLVSWTAMISGLSQNSKFSEAIRTFCGMRI 99

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
            G +P     +SAI AC  L ++ MG ++H LA+K G   ++ VG++L +MYSKC  +  
Sbjct: 100 CGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFD 159

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP--------------- 426
           A +VF+ +  KD  SW +MI GY + G   +A   F KM + +V                
Sbjct: 160 ACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGA 219

Query: 427 --------------------PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                ++   N L   Y + G+ + A ++F      D   RN  
Sbjct: 220 LKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGI----DSECRNVV 275

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           S+  LI GY +  Q    L VF +++     PN  T  S++ ACA   A  +  ++H  V
Sbjct: 276 SYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQV 335

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           ++ + +    V + L+D Y K G +  +   FD +     I WNSL+  +  HG    A+
Sbjct: 336 MKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAI 395

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
            +F++M   G+KPN  TF+S++   S AG+V+ G   F S+ + Y ++P  EHYS +IDL
Sbjct: 396 KIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDL 455

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GR+G+L+EA EFI  MP EP++  W + L ACRIHG+ ++  LA E+L  LEP +    
Sbjct: 456 LGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGAL 515

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
            L+  IYA   + ED   VR   R+   +   G  W++V    + F    WS      +Y
Sbjct: 516 VLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIY 575

Query: 767 SWLQNVPENVTA-----RSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRI 821
             L  + + + A     R+    L +++  KE++   HSE++A+AFALI S      I +
Sbjct: 576 EKLDTLLDQIKAAGYVPRTDSVPLDMDDSMKEKLLHRHSERIAVAFALI-SMPIGKPIIV 634

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            KN+R+CV CH   K++S +   +I + D+   HHF +G CSCGDYW
Sbjct: 635 KKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 231/486 (47%), Gaps = 36/486 (7%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFVKTKLLSVYAKCGCLDDAREVFED 116
           N   +++Q    +  +   ++LHA L         F+   L+++Y+KCG LD A ++F+ 
Sbjct: 6   NALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDT 65

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M +RNL +W+AMI   S++ ++ E +  F  M   G  P  F F   ++AC + G  E G
Sbjct: 66  MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           K MH L +K G+     V +++  +Y KCG +  A + FE M  KD V+W +MI GY +I
Sbjct: 126 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 185

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF-- 294
           GE +EA   F KM  EE+ +        + +   L  C     +   +  LG   D+F  
Sbjct: 186 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 245

Query: 295 ------------------------------TWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
                                         ++TC+I G+ +  +  + L +F E+   G+
Sbjct: 246 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 305

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            PN  T +S I AC +  AL  G ++H+  +K+ F +D  V + L++MY KC  LE A +
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 365

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
            FD I D    +WNS+++ + Q G    A ++F +M +  V PN IT+  L++G    G 
Sbjct: 366 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 425

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            +E +D F  M K   V      ++ +I    + G+   A     +M    F PN     
Sbjct: 426 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMP---FEPNAFGWC 482

Query: 505 SVLPAC 510
           S L AC
Sbjct: 483 SFLGAC 488



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 123/532 (23%), Positives = 232/532 (43%), Gaps = 59/532 (11%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  N + +EAI     +   G    +  + + ++AC    SI + +++H   L      +
Sbjct: 81  LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +FV + L  +Y+KCG + DA +VFE+M  ++  +W+AMI  YS+   + E +  F  M+ 
Sbjct: 141 LFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMID 200

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + +  D  +    L ACG     + G+ +HS V+KLG      V N++  +Y K G +  
Sbjct: 201 EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMES 260

Query: 211 ARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-- 267
           A   F    E ++ V++  +I GY +  + ++   +F ++ R+ I+    TF+ LI++  
Sbjct: 261 ASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACA 320

Query: 268 ------------------------------YNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                          +  G+C +  + ++  + +G  P    W 
Sbjct: 321 NQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIG-DPTEIAWN 379

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVK 356
            ++S F Q+G    A+ +F+ M   GV PN +T  S ++ C+    +  G++  +S+   
Sbjct: 380 SLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKT 439

Query: 357 MGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQA---GYCGK 412
            G        + +I++  +   L EA E +  M  + + + W S + G C+       GK
Sbjct: 440 YGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL-GACRIHGDKEMGK 498

Query: 413 -AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
            A E  +K++     P      VL+S    N  + E V   +   ++  VK+        
Sbjct: 499 LAAEKLVKLE-----PKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKK-------- 545

Query: 472 IAGYQ--QLGQKNNALGV--FRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
           + GY    +G K +  G   +   + S  Y    T+L  + A  Y+  ++ V
Sbjct: 546 LPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSV 597



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 104/211 (49%), Gaps = 8/211 (3%)

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
           K++H  ++         + N L++ Y+K G + ++  +FD M  +++++W ++I G   +
Sbjct: 25  KQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQN 84

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
             +  A+  F  M+  G  P +  F S I A +  G +++GK++ C   + + I   +  
Sbjct: 85  SKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALK-FGIGSELFV 143

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
            S + D+Y + G + +A +  E+MP + + S W A++      G  + A+LA +++ D E
Sbjct: 144 GSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAMIDGYSKIGEFEEALLAFKKMIDEE 202

Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLER 730
               + Q ++      CG    ALK  K  R
Sbjct: 203 V--TIDQHVLCSTLGACG----ALKACKFGR 227


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  345 bits (885), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 209/650 (32%), Positives = 341/650 (52%), Gaps = 54/650 (8%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N+LI  Y +  + D A+ +   ++S     +VF+WT M++ FA+N    +    F+ M  
Sbjct: 14  NLLIDLYTKCDRFDDALAVFHGIQS----KNVFSWTMMLAAFAENRDFDRCWLFFRGMLL 69

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
            G+ P  V I+  +SACTD + + +G  I    +  G  ++ +V  +L+++Y K      
Sbjct: 70  QGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTD 129

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY-- 439
           A  VF  +  +DV +W++M+A Y + G+  +A  LF +M    V PN +T   L+SG   
Sbjct: 130 AASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVT---LVSGLDA 186

Query: 440 ---------------------IQNGN--EDEAVDLFQRMGKNDK--------VKRNTASW 468
                                IQ+G       V+L+ + G+ +         V++N  +W
Sbjct: 187 CASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAW 246

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG--CV 526
           +++ A Y +  +  +A+ V  +M      PN  T +SVL ACA + A  + + IH    V
Sbjct: 247 SAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHV 306

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           L   LES + V+ +L++ Y+K GN+  +  +FD ++  D++ WNSLI     HG    AL
Sbjct: 307 LGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKAL 366

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
           +LF++M+  GL+P   TF S++ A S AGM+D G+K F S    + I P  EH+  M+DL
Sbjct: 367 ELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDL 426

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GR+G + ++ + +  MP EP    W A L ACR + N+D A+ A E LF L+P      
Sbjct: 427 LGRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPY 486

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
            L+  +YA  G+  D  ++R+  +        G+ WIEVK+ V+ F++G         ++
Sbjct: 487 VLLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIH 546

Query: 767 SWLQNVPENVTARSS--------HSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
           + LQ + + + A           H    +++E KE + G HSEKLA+AFAL+ + +    
Sbjct: 547 AELQRLTKLMKAAGYVPDTEMVLHD---VKQEVKETMVGYHSEKLAMAFALLTTPEGS-P 602

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IR+VKN+R+C  CH  +K++S + + EI + D    H F+NG CSCGDYW
Sbjct: 603 IRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 180/398 (45%), Gaps = 41/398 (10%)

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           F+   L+ +Y KC   DDA  VF  ++ +N+++W+ M+ A++ ++ +      F  M+  
Sbjct: 11  FLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQ 70

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+ P +      L AC +  +   G+ +   ++  G+     V+ +++++Y K G    A
Sbjct: 71  GINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDA 130

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------C--- 250
              F  M  +D VAW++M++ Y + G   EA  LF +M                  C   
Sbjct: 131 ASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASL 190

Query: 251 --------------REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                          + I+ GVV    L+  Y + G+ + A E   ++    +  +V  W
Sbjct: 191 GDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQI----VEKNVVAW 246

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL--A 354
           + + + +A+N R   A+ +   M   G+ PN  T  S + AC  + AL  G  IH     
Sbjct: 247 SAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHV 306

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           +  G   DV V  +L+NMYSKC  L  A  +FD I   D+  WNS+IA   Q G   KA 
Sbjct: 307 LGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKAL 366

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLF 452
           ELF +M+   + P +IT+  ++      G  D+    F
Sbjct: 367 ELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHF 404



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 148/323 (45%), Gaps = 42/323 (13%)

Query: 63  LLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
            L AC D+  I + R +  A L    E +  V+T L+S+Y K G   DA  VF  M  R+
Sbjct: 82  FLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASVFLRMSHRD 141

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
           +  WSAM+ AY+R+   RE + LF  M  DG+ P+       L AC + GD  +G LMH 
Sbjct: 142 VVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQ 201

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
            V   G+     V  +++ +Y KCG++  A   F  + EK+ VAW+++ + Y +   N +
Sbjct: 202 RVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRD 261

Query: 242 AHRLFDKMCREEIKLGVVTF-------------------------------------NIL 264
           A R+  +M  E +     TF                                       L
Sbjct: 262 AIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTAL 321

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
           +  Y++ G   +A  M  ++  L    D+  W  +I+  AQ+G+T +AL+LF+ M   G+
Sbjct: 322 VNMYSKCGNLALAGNMFDKIAHL----DLVLWNSLIATNAQHGQTEKALELFERMRLEGL 377

Query: 325 MPNGVTITSAISACTDLKALAMG 347
            P  +T TS + AC+    L  G
Sbjct: 378 QPTIITFTSVLFACSHAGMLDQG 400



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 146/308 (47%), Gaps = 7/308 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFV 93
           NG   EA+ +   +   G    + T ++ L AC     +     +H  +     +  V V
Sbjct: 155 NGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVV 214

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+++Y KCG ++ A E F  + E+N+  WSA+  AY+R+ R R+ + +   M  +GL
Sbjct: 215 GTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGL 274

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL--GMSCVRRVRNSVLAVYVKCGKLIWA 211
            P+   F  +L AC      + G+ +H  +  L  G+     V  +++ +Y KCG L  A
Sbjct: 275 APNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCGNLALA 334

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
              F+ +   D V WNS+I+   Q G+ ++A  LF++M  E ++  ++TF  ++ + +  
Sbjct: 335 GNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHA 394

Query: 272 GQCDVAME-MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  D   +  V  +   GI P+   + CM+    + G    + DL   M F    P+ V 
Sbjct: 395 GMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPF---EPHPVA 451

Query: 331 ITSAISAC 338
             + + AC
Sbjct: 452 WMAFLGAC 459



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/378 (23%), Positives = 173/378 (45%), Gaps = 46/378 (12%)

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           ++G+  +  + N LI++Y+KC+  + A  VF  I+ K+V+SW  M+A + +     + + 
Sbjct: 3   ELGWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWL 62

Query: 416 LFIKMQESDVPPNVITWNVLIS----------------GYIQNGNEDEA------VDLFQ 453
            F  M    + P  +  ++ +S                  +  G E+E+      V L+ 
Sbjct: 63  FFRGMLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYG 122

Query: 454 RMGK-NDKVK-------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           ++G   D          R+  +W++++A Y + G    ALG+FR+M      PN VT++S
Sbjct: 123 KLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVS 182

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
            L ACA L        +H  V  + ++S + V  +L++ Y K G I  +   F  +  K+
Sbjct: 183 GLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKN 242

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
           ++ W+++   Y  +     A+ +  +M   GL PN  TF+S++ A +    +  G+++  
Sbjct: 243 VVAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHE 302

Query: 626 SI--------TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
            I        ++ Y +       +A++++Y + G L  A    + +    D  +W +L+ 
Sbjct: 303 RIHVLGGGLESDVYVL-------TALVNMYSKCGNLALAGNMFDKIA-HLDLVLWNSLIA 354

Query: 678 ACRIHGNIDLAVLAIERL 695
               HG  + A+   ER+
Sbjct: 355 TNAQHGQTEKALELFERM 372


>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
 gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
          Length = 619

 Score =  345 bits (884), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 201/587 (34%), Positives = 308/587 (52%), Gaps = 47/587 (8%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++F +  MI G   N    ++++++  M   G+ P+  T    + AC  L    +G+++
Sbjct: 71  PNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKL 130

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H L VK G   D  V  SL+++Y KC                               G+ 
Sbjct: 131 HGLVVKAGCESDAFVNTSLVSLYGKC-------------------------------GFI 159

Query: 411 GKAYELFIKMQESDVP-PNVITWNVLISGYIQNGNEDEAVDLFQRMGK--NDKVKRNTAS 467
             A+++F      D+P  NV  W  +ISGYI  G   EA+D+F+R     +  ++++  S
Sbjct: 160 DNAFKVF-----DDIPEKNVAAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVS 214

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           W+S+I GY   G    AL +F KM +  F P+C  ++ VL ACA L A          + 
Sbjct: 215 WSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMD 274

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           R     +  +  +LID YAK G +  +  +F GM  KDI+ WN+ I G  + G   AA  
Sbjct: 275 RNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFG 334

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           LF QM+  G++P+  TF+ ++ A + AG+VD G++ F S+   + + P IEHY  M+DL 
Sbjct: 335 LFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLL 394

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           GR+G L+EA + ++ MP+E ++ +W ALL  CR+H +  L    +++L  LEP +     
Sbjct: 395 GRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYV 454

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
           L+  IY+   K EDA K+R +  E   +   G  WIEV  +V+ F+ G  S   S+ +Y+
Sbjct: 455 LLSNIYSASHKWEDAAKIRSIMSERGIKKVPGYSWIEVDGVVHEFLVGDTSHPLSEKIYA 514

Query: 768 WLQNVPENVTAR-----SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH-TIRI 821
            L  + +++ A      + +    IEEEEKE   G HSEKLA+AF LI  S AP+  IR+
Sbjct: 515 KLGELVKDLKASGYVPTTDYVLFDIEEEEKEHFIGCHSEKLAIAFGLI--STAPNDKIRV 572

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           VKN+R+C  CHE  K++S     EI + D+   H F +G CSC DYW
Sbjct: 573 VKNLRVCGDCHEAIKHISRFTGREIIVRDNNRFHCFNDGSCSCKDYW 619



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 197/386 (51%), Gaps = 33/386 (8%)

Query: 71  NSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMI 129
           NS+   + +HA  L L  + D ++  K+L      G  + +  +F   +E N++ ++ MI
Sbjct: 21  NSLKHLKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMI 80

Query: 130 GAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMS 189
                +  ++E +E++  M ++GL PD F FP +L+AC    D + G  +H LV+K G  
Sbjct: 81  HGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCE 140

Query: 190 CVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
               V  S++++Y KCG +  A + F+ + EK+  AW ++ISGY  +G+           
Sbjct: 141 SDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGVGK----------- 189

Query: 250 CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT 309
           CRE I       ++  R+      C V   M+++        D+ +W+ MI G+A NG  
Sbjct: 190 CREAI-------DMFRRA------CSVFDGMLEK--------DIVSWSSMIQGYASNGLP 228

Query: 310 SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL 369
            +ALDLF +M   G  P+   +   + AC  L AL +G    +L  +  F  + ++G +L
Sbjct: 229 KEALDLFFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTAL 288

Query: 370 INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           I+MY+KC  +++A  VF  ++ KD+  WN+ I+G   +G+   A+ LF +M++S + P+ 
Sbjct: 289 IDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDG 348

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRM 455
            T+  L+      G  DE    F  M
Sbjct: 349 NTFVGLLCACTHAGLVDEGRQYFNSM 374



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 186/428 (43%), Gaps = 53/428 (12%)

Query: 17  TKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA 76
           TK+ N    +T +  L  N    E+I +  S+  +G      T+  LL+AC       L 
Sbjct: 68  TKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLG 127

Query: 77  RKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN-------------- 121
            KLH   +    E D FV T L+S+Y KCG +D+A +VF+D+ E+N              
Sbjct: 128 IKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTAIISGYIGV 187

Query: 122 ------------------------LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
                                   + +WS+MI  Y+ +   +E ++LFF M+ +G  PD 
Sbjct: 188 GKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDC 247

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
           +    +L AC   G  E G    +L+ +        +  +++ +Y KCG++  A   F  
Sbjct: 248 YAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRG 307

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
           M +KD V WN+ ISG    G    A  LF +M +  I+    TF  L+ +    G  D  
Sbjct: 308 MRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAGLVDEG 367

Query: 278 MEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
            +    ME +  +TP++  + CM+    + G   +A  L K M    +  N +   + + 
Sbjct: 368 RQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMP---MEANAIVWGALLG 424

Query: 337 ACTDLK--ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
            C   +   L  G+    +A++   + + ++   L N+YS   + E A ++  ++ ++ +
Sbjct: 425 GCRLHRDTQLVEGVLKQLIALEPSNSGNYVL---LSNIYSASHKWEDAAKIRSIMSERGI 481

Query: 395 -----YSW 397
                YSW
Sbjct: 482 KKVPGYSW 489



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 104/211 (49%), Gaps = 6/211 (2%)

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           +K +H  +LR  L+    ++N ++      GN  YS  IF      +I  +N++I G VL
Sbjct: 26  LKHVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVL 85

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           +  +  +++++  M+  GL P+  TF  ++ A +      LG K+   + +         
Sbjct: 86  NDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACARLLDSKLGIKLHGLVVKAGCESDAFV 145

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER---L 695
           + ++++ LYG+ G ++ A +  +D+P E + + W A+++     G    A+    R   +
Sbjct: 146 N-TSLVSLYGKCGFIDNAFKVFDDIP-EKNVAAWTAIISGYIGVGKCREAIDMFRRACSV 203

Query: 696 FD-LEPGDVLIQRLILQIYAICGKPEDALKV 725
           FD +   D++    ++Q YA  G P++AL +
Sbjct: 204 FDGMLEKDIVSWSSMIQGYASNGLPKEALDL 234


>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 621

 Score =  345 bits (884), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 199/612 (32%), Positives = 324/612 (52%), Gaps = 74/612 (12%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M + G   D F FP +++AC   G F  GK +H  V+++G      V N ++ +Y K G+
Sbjct: 33  MRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGR 92

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           +                                +A  LFD+M         +++N ++ +
Sbjct: 93  M-------------------------------RDARHLFDRMSVRS----YISWNTMVSA 117

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           Y     C+ A+E+ +RMES G+ P++ TWT +IS +A++G   +A++LF  M   GV  +
Sbjct: 118 YAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISSYARSGWHEEAMELFGLMRMKGVEVS 177

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
           G  +   IS C DL A      IH  AVK GF +   V ++LI +Y K  ++  A     
Sbjct: 178 GEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGA----- 232

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
                    WN                 LF++M+   +     +WN LI+ + + G  DE
Sbjct: 233 ---------WN-----------------LFLEMKNKSLA----SWNALITSHAEAGLCDE 262

Query: 448 AVDLF---QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
           A+++F   +R G   +++ N  SW+++I G+   G++  AL +FR+MQ +    N VTI 
Sbjct: 263 ALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTIS 322

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           +VL  CA L A +  +EIHG V+R  + +++ V N L++ YAK G +     IF+    K
Sbjct: 323 TVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERK 382

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           D+I+WNS+I GY +HG    AL+ FDQM   G KP+  TF++++ + S +G+V  G+++F
Sbjct: 383 DLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLF 442

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
             + + Y+I P +EHY+ M+DL GR+G L EA E +++MP+ P++ +W ALL +CR+H N
Sbjct: 443 DQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGALLNSCRMHNN 502

Query: 685 IDLAVLAIERLFDLEPGDVLIQRLIL-QIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
            ++A      LF+L   +     ++L  IYA  G+ ED+ +VR   +    + + GQ WI
Sbjct: 503 TEIAEETASHLFNLSHRETTGTYMLLSNIYAASGRWEDSARVRTSAKTKGLKKNPGQSWI 562

Query: 744 EVKNLVYTFVTG 755
           +V+  VYTF  G
Sbjct: 563 KVEKNVYTFSAG 574



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/531 (24%), Positives = 230/531 (43%), Gaps = 78/531 (14%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  +++AC    S  L + +H   L +  +  + V  +L+ +YAK G + DAR +F+ M
Sbjct: 44  TFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLFDRM 103

Query: 118 R-----------------------------------ERNLYTWSAMIGAYSRDQRWREVV 142
                                               E NL TW+++I +Y+R     E +
Sbjct: 104 SVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISSYARSGWHEEAM 163

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
           ELF LM   G+         ++  C + G F   K++H   +K G      V+++++ VY
Sbjct: 164 ELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVY 223

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE----EIKLGV 258
            K G +  A   F  M  K   +WN++I+ + + G  DEA  +F ++ R      ++  V
Sbjct: 224 GKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNV 283

Query: 259 VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
           V+++ +I  +   G+   A+E+ +RM+   I                             
Sbjct: 284 VSWSAIIDGFASKGREKEALELFRRMQHAKI----------------------------- 314

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
                 + N VTI++ +S C +L AL +G EIH   V+    +++LVGN L+NMY+KC  
Sbjct: 315 ------LANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGC 368

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           L+    +F+  + KD+ SWNSMI GY   G    A E F +M +    P+ +T+  ++S 
Sbjct: 369 LKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSS 428

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
              +G   E   LF +M K  +++     +  ++    + G    A  + + M  +   P
Sbjct: 429 CSHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVA---P 485

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           N     ++L +C     +   +E    +   S   +      L + YA SG
Sbjct: 486 NACVWGALLNSCRMHNNTEIAEETASHLFNLSHRETTGTYMLLSNIYAASG 536



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 186/430 (43%), Gaps = 91/430 (21%)

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
           + M  +G + +G T    I AC  + +  +G  IH   ++MGF   + VGN LI MY+K 
Sbjct: 31  RRMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKL 90

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
             +  A  +FD +  +   SWN+M++ Y     C  A E+F +M+   + PN++TW  LI
Sbjct: 91  GRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLI 150

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
           S Y ++G  +EA++LF  M                + G +  G+   AL V         
Sbjct: 151 SSYARSGWHEEAMELFGLM---------------RMKGVEVSGE---ALAV--------- 183

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
                    V+  CA L A  + K IH   ++   E    V ++LI  Y K G++  +  
Sbjct: 184 ---------VISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWN 234

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           +F  M +K + +WN+LI  +   G    AL++F Q++  G                    
Sbjct: 235 LFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSG-------------------- 274

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWE 673
                       +C ++ P +  +SA+ID +   G+ +EA+E    M    I  ++    
Sbjct: 275 ------------DCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTIS 322

Query: 674 ALLTAC----------RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICG-KPEDA 722
            +L+ C           IHG++  AV+           ++L+   ++ +YA CG   E  
Sbjct: 323 TVLSLCAELAALHLGREIHGHVVRAVMV---------NNILVGNGLVNMYAKCGCLKEGH 373

Query: 723 LKVRKLEREN 732
           +   K ER++
Sbjct: 374 MIFEKTERKD 383



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 130/307 (42%), Gaps = 12/307 (3%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRER--------NLYTWSAMIGAYSRDQRWREVVELFFLM 148
           L++ +A+ G  D+A E+F  +           N+ +WSA+I  ++   R +E +ELF  M
Sbjct: 250 LITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRM 309

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
               +  +      +L  C        G+ +H  V++  M     V N ++ +Y KCG L
Sbjct: 310 QHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCL 369

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
                 FE  + KD ++WNSMI+GY   G    A   FD+M +   K   VTF  ++ S 
Sbjct: 370 KEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSC 429

Query: 269 NQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           +  G       +  +M +   I P +  + CM+    + G   +A ++ K M    V PN
Sbjct: 430 SHSGLVHEGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMP---VAPN 486

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
                + +++C       +  E  S    +   +       L N+Y+     E + RV  
Sbjct: 487 ACVWGALLNSCRMHNNTEIAEETASHLFNLSHRETTGTYMLLSNIYAASGRWEDSARVRT 546

Query: 388 MIKDKDV 394
             K K +
Sbjct: 547 SAKTKGL 553



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 11/173 (6%)

Query: 22  PRFR------DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSI 73
           PR R         +D     GR  EA+ +   +  Q AK+  N  T   +L  C +  ++
Sbjct: 277 PRLRPNVVSWSAIIDGFASKGREKEALELFRRM--QHAKILANAVTISTVLSLCAELAAL 334

Query: 74  HLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY 132
           HL R++H   +  V   ++ V   L+++YAKCGCL +   +FE    ++L +W++MI  Y
Sbjct: 335 HLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGY 394

Query: 133 SRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK 185
                    +E F  M++ G  PD   F  +L +C + G    G+ +   ++K
Sbjct: 395 GMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLK 447


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 250/800 (31%), Positives = 401/800 (50%), Gaps = 83/800 (10%)

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E ++L   M +  +  D+ +F  +++ C      E G  ++S+ +    S    + N+ L
Sbjct: 77  EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC--------- 250
           A++V+ G L+ A   F  M E++  +WN ++ GY + G  DEA  L+ +M          
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDV 196

Query: 251 ------------------REEIKLGVVTF---------NILIRSYNQLGQCDVAMEMVKR 283
                              +E+ + VV +         N LI  Y + G    A  +  R
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256

Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
           M       D+ +W  MISG+ +NG   + L+LF  M  + V P+ +T+TS ISAC  L  
Sbjct: 257 MPR----RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
             +G +IH+  +  GF  D+ V NSL  MY        AE++F  ++ KD+ SW +MI+G
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN----- 458
           Y       KA + +  M +  V P+ IT   ++S     G+ D  V+L +   K      
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432

Query: 459 -----------------DKV--------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
                            DK         ++N  SW S+IAG +   +   AL   R+M+ 
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 492

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS--LESSLPVMNSLIDTYAKSGNI 551
           +   PN +T+ + L ACA + A    KEIH  VLR    L+  LP  N+L+D Y + G +
Sbjct: 493 T-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP--NALLDMYVRCGRM 549

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             + + F+    KD+ +WN L+ GY   G     ++LFD+M    ++P+  TF+S++   
Sbjct: 550 NTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
           S + MV  G   F S  E Y + P ++HY+ ++DL GR+G+L+EA +FI+ MP+ PD ++
Sbjct: 609 SKSQMVRQGLMYF-SKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667

Query: 672 WEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
           W ALL ACRIH  IDL  L+ + +F+L+   V    L+  +YA CGK  +  KVR++ +E
Sbjct: 668 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 727

Query: 732 NTRRNSFGQCWIEVKNLVYTFVTGG----WSESYSDLLYSWLQNVPE-NVTARSSHSGLC 786
           N      G  W+EVK  V+ F++       ++  + +L  + + + E  +T  S  S + 
Sbjct: 728 NGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMD 787

Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
             E  ++EI   HSE+ A+AF LI +      I + KN+ MC +CH+T K++S     EI
Sbjct: 788 ETEISRDEIFCGHSERKAIAFGLINTVPG-MPIWVTKNLSMCENCHDTVKFISKTVRREI 846

Query: 847 FLADSKCLHHFKNGQCSCGD 866
            + D++  HHFK+G+CSCGD
Sbjct: 847 SVRDAEHFHHFKDGECSCGD 866



 Score =  236 bits (601), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 160/550 (29%), Positives = 270/550 (49%), Gaps = 71/550 (12%)

Query: 28  HLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLV 86
            L  LC NG+L EA+ +L+S+      V  + ++ L++ C    +     K+++  L+ +
Sbjct: 65  QLHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSM 124

Query: 87  TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
           + + V +    L+++ + G L DA  VF  M ERNL++W+ ++G Y++   + E + L+ 
Sbjct: 125 SSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYH 184

Query: 147 LMV-QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
            M+   G+ PD + FP +L+ CG   D   GK +H  V++ G      V N+++ +YVKC
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC 244

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF------------------- 246
           G +  AR  F+ M  +D ++WN+MISGYF+ G   E   LF                   
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304

Query: 247 -------DKMCREEIKLGVVTF---------NILIRSYNQLGQCDVAMEMVKRMESLGIT 290
                  D+    +I   V+T          N L + Y   G    A ++  RME     
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER---- 360

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
            D+ +WT MISG+  N    +A+D ++ M    V P+ +T+ + +SAC  L  L  G+E+
Sbjct: 361 KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL 420

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H LA+K      V+V N+LINMYSKC+ ++ A  +F  I  K+V SW S+IAG      C
Sbjct: 421 HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRC 480

Query: 411 GKAYELFIKMQESDVPPNV---------------------ITWNVLISGY-IQNGNEDEA 448
            +A  +F++  +  + PN                      I  +VL +G  + +   +  
Sbjct: 481 FEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNAL 539

Query: 449 VDLFQRMGKNDKV-------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
           +D++ R G+ +         K++  SWN L+ GY + GQ +  + +F +M  S   P+ +
Sbjct: 540 LDMYVRCGRMNTAWSQFNSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEI 599

Query: 502 TILSVLPACA 511
           T +S+L  C+
Sbjct: 600 TFISLLCGCS 609



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 233/491 (47%), Gaps = 38/491 (7%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDA 110
           G K    T+  +L+ C     +   +++H   +    E+D+ V   L+++Y KCG +  A
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250

Query: 111 REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
           R +F+ M  R++ +W+AMI  Y  +    E +ELFF M    + PD      ++ AC   
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
           GD   G+ +H+ VI  G +    V NS+  +Y+  G    A + F  M+ KD V+W +MI
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVK-----RME 285
           SGY      D+A   +  M ++ +K   +T   ++ +   LG  D  +E+ K     R+ 
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430

Query: 286 SLGITP--------------------------DVFTWTCMISGFAQNGRTSQALDLFKEM 319
           S  I                            +V +WT +I+G   N R  +AL   ++M
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
               + PN +T+T+A++AC  + AL  G EIH+  ++ G   D  + N+L++MY +C  +
Sbjct: 491 KMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 549

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
             A   F+  K KDV SWN ++ GY + G      ELF +M +S V P+ IT+  L+ G 
Sbjct: 550 NTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
            ++    + +  F +M ++  V  N   +  ++    + G+   A    +KM  +   P+
Sbjct: 609 SKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVT---PD 664

Query: 500 CVTILSVLPAC 510
                ++L AC
Sbjct: 665 PAVWGALLNAC 675



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/411 (22%), Positives = 186/411 (45%), Gaps = 20/411 (4%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFVKTKL 97
           ++AI     +     K    T   +L AC     +    +LH        I  V V   L
Sbjct: 380 DKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNL 439

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           +++Y+KC C+D A ++F ++  +N+ +W+++I     + R  E + +F   ++  L P+ 
Sbjct: 440 INMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNA 498

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
                 L AC   G    GK +H+ V++ G+     + N++L +YV+CG++  A   F S
Sbjct: 499 ITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS 558

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
             +KD  +WN +++GY + G+      LFD+M +  ++   +TF  L+   ++       
Sbjct: 559 -QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQG 617

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
           +    +ME  G+TP++  + C++    + G   +A    ++M    V P+     + ++A
Sbjct: 618 LMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP---VTPDPAVWGALLNA 674

Query: 338 CTDLKALAMGMEIHSLAVKMGFT-DDVLVGNSLI--NMYSKCEELEAAERVFDMIKDKDV 394
           C     + +G     L+ +  F  D   VG  ++  N+Y+ C +     +V  M+K+  +
Sbjct: 675 CRIHHKIDLG----ELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGL 730

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
               ++ AG       GK +     + +    P     N ++ G+ +  +E
Sbjct: 731 ----TVDAGCSWVEVKGKVHAF---LSDDKYHPQTKEINTVLEGFYEKMSE 774



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 7/203 (3%)

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           G+   A+ +   MQ      +    ++++  C +  A  +  +++   L       + + 
Sbjct: 73  GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF-GL 597
           N+ +  + + GN+V +  +F  MS +++ +WN L+ GY   G++  A+ L+ +M    G+
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192

Query: 598 KPNRGTFLSIILAHSLAGMVDL--GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           KP+  TF  ++   +  G+ DL  GK+V   +   Y     I+  +A+I +Y + G ++ 
Sbjct: 193 KPDVYTFPCVL--RTCGGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMYVKCGDVKS 249

Query: 656 AMEFIEDMPIEPDSSIWEALLTA 678
           A    + MP   D   W A+++ 
Sbjct: 250 ARLLFDRMP-RRDIISWNAMISG 271


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 233/735 (31%), Positives = 367/735 (49%), Gaps = 102/735 (13%)

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKMCRE------------------------EIKL 256
           ++ V+WNSMI  +   G ++E+  L  +M  E                        EI L
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 257 G---------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
           G               +V  N L+  Y++ G C    +M+ +M +     +V +W  M+ 
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCG-CITNAQMIFKMNN---NKNVVSWNTMVG 116

Query: 302 GFAQNGRTSQALDLFKEMSFVG--VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           GF+  G T    D+ ++M   G  V  + VTI +A+  C     L    E+H  ++K  F
Sbjct: 117 GFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF 176

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             + LV N+ +  Y+KC  L  A+RVF  I+ K V SWN++I G+ Q+     + +  ++
Sbjct: 177 VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQ 236

Query: 420 MQESDVPPNVITWNVLISG-----------------------------------YIQNGN 444
           M+ S + P+  T   L+S                                    YI  G 
Sbjct: 237 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 296

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
                 LF  M   DK   +  SWN++I GY Q G  + ALGVFR+M         ++++
Sbjct: 297 LCTVQALFDAM--EDK---SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMM 351

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
            V  AC+ L +    +E H   L+  LE    +  SLID YAK+G+I  S  +F+G+  K
Sbjct: 352 PVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEK 411

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
              +WN++I GY +HG    A+ LF++M+  G  P+  TFL ++ A + +G++  G +  
Sbjct: 412 STASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYL 471

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI-EDMPIEPDSSIWEALLTACRIHG 683
             +   + + P ++HY+ +ID+ GR+G+L++A+  + E+M  E D  IW++LL++CRIH 
Sbjct: 472 DQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQ 531

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
           N+++      +LF+LEP       L+  +YA  GK ED  KVR+   E + R   G  WI
Sbjct: 532 NLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWI 591

Query: 744 EVKNLVYTFVTG-----GWSE-----SYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKE 793
           E+   V++FV G     G+ E     S  ++  S +   P+ ++ +   S    EEE+ E
Sbjct: 592 ELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLS----EEEKIE 647

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
           ++ G HSEKLAL + LI +S+   TIR+ KN+R+CV CH  AK +S +   EI + D+K 
Sbjct: 648 QLRG-HSEKLALTYGLIKTSEGT-TIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKR 705

Query: 854 LHHFKNGQCSCGDYW 868
            HHFKNG CSCGDYW
Sbjct: 706 FHHFKNGVCSCGDYW 720



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 223/490 (45%), Gaps = 59/490 (12%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T + +L  C     I L + +H + + L  + ++ +   L+ +Y+KCGC+ +A+ +F+  
Sbjct: 44  TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 103

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG--LFPDDFLFPKILQACGNCGDFEA 175
             +N+ +W+ M+G +S +       ++   M+  G  +  D+      +  C +     +
Sbjct: 104 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 163

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
            K +H   +K        V N+ +A Y KCG L +A+R F  +  K   +WN++I G+ Q
Sbjct: 164 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 223

Query: 236 IGEND-----EAHRLFD---------KMCR--------EEIKLGVVTFNILIRS------ 267
              ND     +AH              +C         + ++LG      +IR+      
Sbjct: 224 --SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 281

Query: 268 ---------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
                    Y   G+      +   ME       + +W  +I+G+ QNG   +AL +F++
Sbjct: 282 FVYLSVLSLYIHCGELCTVQALFDAMED----KSLVSWNTVITGYLQNGFPDRALGVFRQ 337

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   G+   G+++     AC+ L +L +G E H+ A+K    DD  +  SLI+MY+K   
Sbjct: 338 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 397

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           +  + +VF+ +K+K   SWN+MI GY   G   +A +LF +MQ +   P+ +T+  +++ 
Sbjct: 398 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 457

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL------------- 485
              +G   E +    +M  +  +K N   +  +I    + GQ + AL             
Sbjct: 458 CNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV 517

Query: 486 GVFRKMQSSC 495
           G+++ + SSC
Sbjct: 518 GIWKSLLSSC 527



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 135/540 (25%), Positives = 239/540 (44%), Gaps = 90/540 (16%)

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQ---DGLF-PDDFLFPKILQACGNCGDFEA 175
           RN  +W++MI  +S +    E   L   M++   DG F PD      +L  C    +   
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           GK +H   +KL +     + N+++ +Y KCG +  A+  F+  + K+ V+WN+M+ G+  
Sbjct: 61  GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120

Query: 236 IGENDEAHRLFDKMCR--EEIKLGVVTF-------------------------------- 261
            G+      +  +M    E++K   VT                                 
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180

Query: 262 ---NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
              N  + SY + G    A  +   + S      V +W  +I G AQ+     +LD   +
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRS----KTVNSWNALIGGHAQSNDPRLSLDAHLQ 236

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   G++P+  T+ S +SAC+ LK+L +G E+H   ++     D+ V  S++++Y  C E
Sbjct: 237 MKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 296

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM----------------QE 422
           L   + +FD ++DK + SWN++I GY Q G+  +A  +F +M                  
Sbjct: 297 LCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGA 356

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEA------VDLFQRMGK--------NDKVKRNTASW 468
             + P++       +  +++  ED+A      +D++ + G         N   +++TASW
Sbjct: 357 CSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASW 416

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH-GCVL 527
           N++I GY   G    A+ +F +MQ +   P+ +T L VL AC      N    IH G   
Sbjct: 417 NAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTAC------NHSGLIHEGLRY 470

Query: 528 RRSLESSLPVMNSL------IDTYAKSGNIVYS-RTIFDGMSSK-DIITWNSLICGYVLH 579
              ++SS  +  +L      ID   ++G +  + R + + MS + D+  W SL+    +H
Sbjct: 471 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIH 530



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 214/492 (43%), Gaps = 56/492 (11%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFL 83
           +T +      G  +    VL  +   G  V+ +  T +N +  C   + +   ++LH + 
Sbjct: 112 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY- 170

Query: 84  NLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           +L  E   +  V    ++ YAKCG L  A+ VF  +R + + +W+A+IG +++    R  
Sbjct: 171 SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 230

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
           ++    M   GL PD F    +L AC        GK +H  +I+  +     V  SVL++
Sbjct: 231 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 290

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           Y+ CG+L   +  F++M++K  V+WN++I+GY Q G  D A  +F +M    I+L  ++ 
Sbjct: 291 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 350

Query: 262 NILIRSYNQLGQCDVAME----------------------MVKRMESLGITPDVF----- 294
             +  + + L    +  E                      M  +  S+  +  VF     
Sbjct: 351 MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE 410

Query: 295 ----TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME- 349
               +W  MI G+  +G   +A+ LF+EM   G  P+ +T    ++AC     +  G+  
Sbjct: 411 KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRY 470

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF--DMIKDKDVYSWNSMIAGYCQ- 406
           +  +    G   ++     +I+M  +  +L+ A RV   +M ++ DV  W S+++  C+ 
Sbjct: 471 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS-CRI 529

Query: 407 -------AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
                       K +EL     E + P N +  + L +G    G  ++   + QRM +  
Sbjct: 530 HQNLEMGEKVAAKLFEL-----EPEKPENYVLLSNLYAGL---GKWEDVRKVRQRMNEMS 581

Query: 460 KVKRNTASWNSL 471
             K    SW  L
Sbjct: 582 LRKDAGCSWIEL 593



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 138/297 (46%), Gaps = 16/297 (5%)

Query: 6   LTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQ 65
           L T Q L   +  KS   +      +L  NG  + A+ V   +   G ++   + + +  
Sbjct: 297 LCTVQALFDAMEDKSLVSWNTVITGYL-QNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 355

Query: 66  ACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYT 124
           AC    S+ L R+ HA+ L  + E D F+   L+ +YAK G +  + +VF  ++E++  +
Sbjct: 356 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 415

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLV 183
           W+AMI  Y      +E ++LF  M + G  PDD  F  +L AC + G    G + +  + 
Sbjct: 416 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 475

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF-ESMDEKDGVA-WNSMISG-----YFQI 236
              G+    +    V+ +  + G+L  A R   E M E+  V  W S++S        ++
Sbjct: 476 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 535

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
           GE   A +LF+ +  E+ +  V+  N+    Y  LG+ +   ++ +RM  + +  D 
Sbjct: 536 GEKVAA-KLFE-LEPEKPENYVLLSNL----YAGLGKWEDVRKVRQRMNEMSLRKDA 586


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 196/571 (34%), Positives = 309/571 (54%), Gaps = 39/571 (6%)

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           +  CT L  L  G  IH+L +   F DD+++ N+L+N+Y+KC +L  A ++FD +  +DV
Sbjct: 22  LKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDV 81

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED-------- 446
            +W ++I GY Q      A  L  +M    + PN  T   L+      G+ D        
Sbjct: 82  VTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLH 141

Query: 447 ----------------EAVDLFQRMGKNDK--------VKRNTASWNSLIAGYQQLGQKN 482
                             +D++ R    ++        V +N  SWN+LIAGY + GQ +
Sbjct: 142 GLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGD 201

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
            A  +F  M      P   T  SVL ACA + +  + K +H  +++   +    V N+L+
Sbjct: 202 KAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLL 261

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
           D YAKSG+I  ++ +FD ++ +D+++WNS++ GY  HG    AL  F++M    + PN  
Sbjct: 262 DMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDI 321

Query: 603 TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           TFL ++ A S AG++D G+  F  + + Y + P I HY  M+DL GR+G L+ A++FI +
Sbjct: 322 TFLCVLTACSHAGLLDEGRHYF-DMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISE 380

Query: 663 MPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDA 722
           MPI+P +++W ALL ACR+H N++L   A E +F+L+        L+  IYA+ G+  DA
Sbjct: 381 MPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDA 440

Query: 723 LKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----T 777
            KVRK+ +E+  +      W+E++N V+ FV    +      +++  + + + +      
Sbjct: 441 AKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIKEIGYV 500

Query: 778 ARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKY 837
             SSH  LC++++E+E     HSEKLALAFAL+ +     TIRI KNIR+C  CH   K+
Sbjct: 501 PDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGS-TIRIKKNIRICGDCHSAFKF 559

Query: 838 VSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           VS +   EI + D+   HHF +G CSC DYW
Sbjct: 560 VSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 172/360 (47%), Gaps = 47/360 (13%)

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           +V  N L+  Y + G    A ++   M S     DV TWT +I+G++Q+ R   AL L  
Sbjct: 50  LVMQNTLLNLYAKCGDLVYARKLFDEMSS----RDVVTWTALITGYSQHDRPQDALLLLP 105

Query: 318 EMSFVGVMPNGVTITSAISACTDLKA--LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           EM  +G+ PN  T+ S + A + + +  +  G ++H L ++ G+  +V V  ++++MY++
Sbjct: 106 EMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYAR 165

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--- 432
           C  LE A+ +FD++  K+  SWN++IAGY + G   KA+ LF  M   +V P   T+   
Sbjct: 166 CHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSV 225

Query: 433 --------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDK 460
                                           N L+  Y ++G+ ++A  +F R+ K D 
Sbjct: 226 LCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDV 285

Query: 461 VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
           V     SWNS++ GY Q G    AL  F +M  +   PN +T L VL AC++    ++ +
Sbjct: 286 V-----SWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGR 340

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT-WNSLICGYVLH 579
                + + ++E  +    +++D   ++G++  +      M  K     W +L+    +H
Sbjct: 341 HYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALLGACRMH 400



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 205/450 (45%), Gaps = 52/450 (11%)

Query: 62  NLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
            LL+ C   N ++  + +HA L N     D+ ++  LL++YAKCG L  AR++F++M  R
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG--DFEAGKL 178
           ++ TW+A+I  YS+  R ++ + L   M++ GL P+ F    +L+A    G  D   G+ 
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H L ++ G      V  ++L +Y +C  L  A+  F+ M  K+ V+WN++I+GY + G+
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199

Query: 239 NDEAHRLFDKMCREEIKLGVVTF-----------------------------------NI 263
            D+A  LF  M RE +K    T+                                   N 
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+  Y + G  + A ++  R+       DV +W  M++G++Q+G    AL  F+EM    
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAK----RDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTR 315

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA- 382
           + PN +T    ++AC+    L  G     +  K      +    +++++  +   L+ A 
Sbjct: 316 IAPNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAI 375

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAG----YCGKAYELFIKMQESDVPPNVITWNVLISG 438
           + + +M        W +++ G C+        G A E   ++       +V+ +N+    
Sbjct: 376 QFISEMPIKPTAAVWGALL-GACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNI---- 430

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           Y   G  ++A  + + M ++   K    SW
Sbjct: 431 YALAGRWNDAAKVRKMMKESGVKKEPACSW 460



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 177/364 (48%), Gaps = 13/364 (3%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQAC--IDSNSIHLARKLHAF-LNLVTEIDVFV 93
           R  +A+ +L  +   G K  + T  +LL+A   + S  +   R+LH   L    + +V+V
Sbjct: 96  RPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYV 155

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              +L +YA+C  L++A+ +F+ M  +N  +W+A+I  Y+R  +  +   LF  M+++ +
Sbjct: 156 SCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENV 215

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P  F +  +L AC + G  E GK +H+L+IK G   V  V N++L +Y K G +  A++
Sbjct: 216 KPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKK 275

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ + ++D V+WNSM++GY Q G    A + F++M R  I    +TF  ++ + +  G 
Sbjct: 276 VFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGL 335

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
            D        M+   + P +  +  M+    + G   +A+    EM    + P      +
Sbjct: 336 LDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMP---IKPTAAVWGA 392

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS---LINMYSKCEELEAAERVFDMIK 390
            + AC     +   ME+   A +  F  D     +   L N+Y+       A +V  M+K
Sbjct: 393 LLGACR----MHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMK 448

Query: 391 DKDV 394
           +  V
Sbjct: 449 ESGV 452



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 96/185 (51%), Gaps = 2/185 (1%)

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           ++L  C +L   N+ K IH  +L       L + N+L++ YAK G++VY+R +FD MSS+
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD-LGKKV 623
           D++TW +LI GY  H     AL L  +M   GLKPN+ T  S++ A S  G  D L  + 
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
              +   Y     +    A++D+Y R   LEEA + I D+ +  +   W AL+      G
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEA-QLIFDVMVSKNEVSWNALIAGYARKG 198

Query: 684 NIDLA 688
             D A
Sbjct: 199 QGDKA 203



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 100/199 (50%), Gaps = 2/199 (1%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           G+ ++A  +  ++  +  K    TY ++L AC    S+   + +HA +     ++  FV 
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             LL +YAK G ++DA++VF+ + +R++ +W++M+  YS+    +  ++ F  M++  + 
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIA 317

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+D  F  +L AC + G  + G+    ++ K  +        +++ +  + G L  A +F
Sbjct: 318 PNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQF 377

Query: 215 FESMDEKDGVA-WNSMISG 232
              M  K   A W +++  
Sbjct: 378 ISEMPIKPTAAVWGALLGA 396


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 219/749 (29%), Positives = 375/749 (50%), Gaps = 86/749 (11%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR---- 251
           N +++ YVK G L  AR+ F+ M E+  V W  +I GY Q+ +  EA  LF +M R    
Sbjct: 87  NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTE 146

Query: 252 ---------------------------EEIKLG----VVTFNILIRSYNQLGQCDVAMEM 280
                                      + IKLG    ++  N L+ SY +  + D+A ++
Sbjct: 147 PDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQL 206

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
            K M  +    D  ++  MI+G++++G   +A++LF EM   G+ P   T  + + A   
Sbjct: 207 FKEMPEI----DSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIG 262

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
           L  + +G +IHS  +K  F  +V V N+L++ YSK + +  A ++FD + ++D  S+N +
Sbjct: 263 LDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVI 322

Query: 401 IAGYCQAGYCGKAYELFIKMQES-------------DVPPNVITW--------------- 432
           I+GY   G    A++LF ++Q +              +  N + W               
Sbjct: 323 ISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTA 382

Query: 433 -------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL 485
                  N L+  Y + G  +EA  +F  +       R+   W ++I+ Y Q G     L
Sbjct: 383 DSEILVGNSLVDMYAKCGKFEEAEMIFTNL-----THRSAVPWTAMISAYVQKGFYEEGL 437

Query: 486 GVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
            +F KM+ +    +  T  S+L A A + + +  K++H  +++    S++   ++L+D Y
Sbjct: 438 QLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVY 497

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
           AK G+I  +   F  M  ++I++WN++I  Y  +G   A L  F +M   GL+P+  +FL
Sbjct: 498 AKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFL 557

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
            ++ A S +G+V+ G   F S+T+ Y++ P  EHY++++D+  RSG+  EA + + +MPI
Sbjct: 558 GVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPI 617

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP-GDVLIQRLILQIYAICGKPEDALK 724
           +PD  +W ++L ACRIH N +LA  A ++LF++E   D      +  IYA  G+ E+  K
Sbjct: 618 DPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSK 677

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL---YSWLQNVPENVTARSS 781
           V K  R+   +      W+E+K+  + F          + +      L    E +  +  
Sbjct: 678 VHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPD 737

Query: 782 HSGLCIEEEEKEEISGI--HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVS 839
            S     E+EK ++  +  HSE+LA+AFALI + +    I ++KN+R C+ CH   K +S
Sbjct: 738 TSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGS-PILVMKNLRACIDCHAAIKVIS 796

Query: 840 MMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +   EI + DS   HHF++G CSCGD+W
Sbjct: 797 KIVGREITVRDSTRFHHFRDGFCSCGDFW 825



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 145/560 (25%), Positives = 259/560 (46%), Gaps = 87/560 (15%)

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           ++K G        N  +  ++K G+L  AR+ FE M  K+ V+ N MISGY + G   EA
Sbjct: 43  IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEA 102

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
            +LFD M                               V+R           TWT +I G
Sbjct: 103 RKLFDGM-------------------------------VERT--------AVTWTILIGG 123

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           ++Q  +  +A +LF +M   G  P+ VT  + +S C   +      ++ +  +K+G+   
Sbjct: 124 YSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSR 183

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           ++VGN+L++ Y K   L+ A ++F  + + D  S+N+MI GY + G   KA  LF++MQ 
Sbjct: 184 LIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQN 243

Query: 423 SDVPPNVIT------------------------------WNVLISG-----YIQNGNEDE 447
           S + P   T                              WNV +S      Y ++ +  +
Sbjct: 244 SGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVID 303

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           A  LF  M + D V     S+N +I+GY   G+   A  +FR++Q + F        ++L
Sbjct: 304 ARKLFDEMPEQDGV-----SYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATML 358

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
              +  +     ++IH   +  + +S + V NSL+D YAK G    +  IF  ++ +  +
Sbjct: 359 SIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAV 418

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
            W ++I  YV  GF+   L LF++M+   +  ++ TF S++ A +    + LGK++   I
Sbjct: 419 PWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFI 478

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI--WEALLTACRIHGNI 685
            +    +  +   SA++D+Y + G +++A++  ++M   PD +I  W A+++A   +G  
Sbjct: 479 IKS-GFMSNVFSGSALLDVYAKCGSIKDAVQTFQEM---PDRNIVSWNAMISAYAQNGEA 534

Query: 686 DLAVLAIER--LFDLEPGDV 703
           +  + + +   L  L+P  V
Sbjct: 535 EATLKSFKEMVLSGLQPDSV 554



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 178/728 (24%), Positives = 305/728 (41%), Gaps = 148/728 (20%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           ++S Y K G L +AR++F+ M ER   TW+ +IG YS+  +++E  ELF  M + G  PD
Sbjct: 89  MISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPD 148

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
              F  +L  C           + + +IKLG      V N+++  Y K  +L  A + F+
Sbjct: 149 YVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFK 208

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------------- 261
            M E D V++N+MI+GY + G +++A  LF +M    +K    TF               
Sbjct: 209 EMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVL 268

Query: 262 --------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                               N L+  Y++      A ++   M       D  ++  +IS
Sbjct: 269 GQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPE----QDGVSYNVIIS 324

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
           G+A +G+   A DLF+E+ F           + +S  ++     MG +IH+  +      
Sbjct: 325 GYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADS 384

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           ++LVGNSL++MY+KC + E AE +F  +  +    W +MI+ Y Q G+  +  +LF KM+
Sbjct: 385 EILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMR 444

Query: 422 ESDVPPNVITWNVLI---------------------SGYIQN--------------GNED 446
           ++ V  +  T+  L+                     SG++ N              G+  
Sbjct: 445 QASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIK 504

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           +AV  FQ M       RN  SWN++I+ Y Q G+    L  F++M  S   P+ V+ L V
Sbjct: 505 DAVQTFQEMP-----DRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGV 559

Query: 507 LPACAY-------LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
           L AC++       L   N + +I+    RR   +      S++D   +SG    +  +  
Sbjct: 560 LSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYA------SVVDMLCRSGRFNEAEKLMA 613

Query: 560 GMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG--- 615
            M    D I W+S++    +H     A    DQ+ +     +   ++++   ++ AG   
Sbjct: 614 EMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWE 673

Query: 616 --------MVDLGKK---------------VFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
                   M D G K               +F +   C+   P IE     ID+  ++  
Sbjct: 674 NVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCH---PQIEEIRKKIDMLTKT-- 728

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQI 712
                  +E++  +PD        T+C +H          +  F +E      +RL +  
Sbjct: 729 -------MEELGYKPD--------TSCALHNE--------DEKFKVESLKYHSERLAIA- 764

Query: 713 YAICGKPE 720
           +A+   PE
Sbjct: 765 FALISTPE 772



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 237/515 (46%), Gaps = 53/515 (10%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA----FLNLVTEIDVF 92
           +  EA  +   +   G +    T++ LL  C   N   +  ++       + L  +  + 
Sbjct: 129 QFKEAFELFVQMQRCGTEPDYVTFVTLLSGC---NGHEMGNQITQVQTQIIKLGYDSRLI 185

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V   L+  Y K   LD A ++F++M E +  +++AMI  YS+D    + V LF  M   G
Sbjct: 186 VGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSG 245

Query: 153 LFPDDFLFPKILQACGNCG--DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           L P +F F  +L  C N G  D   G+ +HS VIK        V N++L  Y K   +I 
Sbjct: 246 LKPTEFTFAAVL--CANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVID 303

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD----------------------- 247
           AR+ F+ M E+DGV++N +ISGY   G++  A  LF                        
Sbjct: 304 ARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASN 363

Query: 248 ----KMCREEIKLGVVTF--------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
               +M R+     +VT         N L+  Y + G+ + A  +   +      P    
Sbjct: 364 TLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVP---- 419

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           WT MIS + Q G   + L LF +M    V+ +  T  S + A   + +L++G ++HS  +
Sbjct: 420 WTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFII 479

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K GF  +V  G++L+++Y+KC  ++ A + F  + D+++ SWN+MI+ Y Q G      +
Sbjct: 480 KSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLK 539

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
            F +M  S + P+ +++  ++S    +G  +E +  F  M +  K+      + S++   
Sbjct: 540 SFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDML 599

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            + G+ N A  +  +M      P+ +   SVL AC
Sbjct: 600 CRSGRFNEAEKLMAEMPID---PDEIMWSSVLNAC 631



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 140/588 (23%), Positives = 244/588 (41%), Gaps = 140/588 (23%)

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
           R+   G  PD       +  F +NG  SQA  LF++      MP+  T+++         
Sbjct: 42  RIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEK------MPHKNTVST--------- 86

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
                                   N +I+ Y K   L  A ++FD + ++   +W  +I 
Sbjct: 87  ------------------------NMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIG 122

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG------------------------ 438
           GY Q     +A+ELF++MQ     P+ +T+  L+SG                        
Sbjct: 123 GYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDS 182

Query: 439 -----------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
                      Y ++   D A  LF+ M + D V     S+N++I GY + G    A+ +
Sbjct: 183 RLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSV-----SYNAMITGYSKDGLDEKAVNL 237

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKV--KEIHGCVLRRSLESSLPVMNSLIDTY 545
           F +MQ+S   P   T  +VL  CA +   + V  ++IH  V++ +   ++ V N+L+D Y
Sbjct: 238 FVEMQNSGLKPTEFTFAAVL--CANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFY 295

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR---G 602
           +K  +++ +R +FD M  +D +++N +I GY   G    A DLF +++       +    
Sbjct: 296 SKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFA 355

Query: 603 TFLSI------------ILAHSLAGMVDLGKKVFCSITECY----------QIIPMIEH- 639
           T LSI            I A ++    D    V  S+ + Y           I   + H 
Sbjct: 356 TMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHR 415

Query: 640 ----YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
               ++AMI  Y + G  EE ++    M     S I +    A  +  +  +A L++ + 
Sbjct: 416 SAVPWTAMISAYVQKGFYEEGLQLFNKM--RQASVIADQATFASLLRASASIASLSLGKQ 473

Query: 696 ---FDLEPG---DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLV 749
              F ++ G   +V     +L +YA CG  +DA++  +   E   RN      +    ++
Sbjct: 474 LHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQ---EMPDRN-----IVSWNAMI 525

Query: 750 YTFVTGGWSE----SYSDLLYSWLQNVPENVT-----ARSSHSGLCIE 788
             +   G +E    S+ +++ S LQ  P++V+     +  SHSGL  E
Sbjct: 526 SAYAQNGEAEATLKSFKEMVLSGLQ--PDSVSFLGVLSACSHSGLVEE 571



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 147/315 (46%), Gaps = 41/315 (13%)

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           I +  VK GF  D    N  +  + K  EL  A ++F+ +  K+  S N MI+GY ++G 
Sbjct: 39  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
            G+A +LF  M    V    +TW +LI GY Q                            
Sbjct: 99  LGEARKLFDGM----VERTAVTWTILIGGYSQ---------------------------- 126

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
                   L Q   A  +F +MQ     P+ VT +++L  C      N++ ++   +++ 
Sbjct: 127 --------LNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKL 178

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
             +S L V N+L+D+Y KS  +  +  +F  M   D +++N++I GY   G    A++LF
Sbjct: 179 GYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLF 238

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            +M++ GLKP   TF +++ A+     + LG+++   + +    +  +   +A++D Y +
Sbjct: 239 VEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKT-NFVWNVFVSNALLDFYSK 297

Query: 650 SGKLEEAMEFIEDMP 664
              + +A +  ++MP
Sbjct: 298 HDSVIDARKLFDEMP 312



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 86/210 (40%), Gaps = 45/210 (21%)

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
           N V  I   +++   +      N  +  + K+G +  +R +F+ M  K+ ++ N +I GY
Sbjct: 34  NVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGY 93

Query: 577 VLHGFWHAALDLFD-------------------------------QMKSFGLKPNRGTFL 605
           V  G    A  LFD                               QM+  G +P+  TF+
Sbjct: 94  VKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFV 153

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS------AMIDLYGRSGKLEEAMEF 659
           +++   +       G ++   IT+    I  + + S       ++D Y +S +L+ A + 
Sbjct: 154 TLLSGCN-------GHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQL 206

Query: 660 IEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            ++MP E DS  + A++T     G  + AV
Sbjct: 207 FKEMP-EIDSVSYNAMITGYSKDGLDEKAV 235


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 210/626 (33%), Positives = 330/626 (52%), Gaps = 55/626 (8%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           DVF+W  +I+  A++G +++AL  F  M  + + P   +   AI AC+ L  +  G + H
Sbjct: 40  DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
             A   G+  D+ V ++LI MYS C +LE A +VFD I  +D+ SW SMI GY   G   
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNAL 159

Query: 412 KAYELF--IKMQESD---------------------VPPNVIT----------------- 431
            A  LF  + + E+D                     VP   +T                 
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219

Query: 432 -WNVLISGYIQNGNEDEAV--DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
             N L+  Y + G    AV   +F ++   D+V     S+NS+++ Y Q G  N A  VF
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRV-----SYNSIMSVYAQSGMSNEAFEVF 274

Query: 489 RKM-QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           R++ ++     N +T+ +VL A ++  A    K IH  V+R  LE  + V  S+ID Y K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G +  +R  FD M +K++ +W ++I GY +HG    AL+LF  M   G++PN  TF+S+
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           + A S AG+   G + F ++   + + P +EHY  M+DL GR+G L++A + I+ M ++P
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           DS IW +LL ACRIH N++LA +++ RLF+L+  +     L+  IYA  G+ +D  +VR 
Sbjct: 455 DSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRM 514

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTAR---SSHSG 784
           + +        G   +E+   V+ F+ G       + +Y +L  +   +      S+ S 
Sbjct: 515 IMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSS 574

Query: 785 LC--IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMH 842
           +C  ++EEEKE    +HSEKLA+AF ++ +     T+ +VKN+R+C  CH   K +S + 
Sbjct: 575 VCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGS-TVNVVKNLRVCSDCHNVIKLISKIV 633

Query: 843 HCEIFLADSKCLHHFKNGQCSCGDYW 868
             E  + D+K  HHFK+G CSCGDYW
Sbjct: 634 DREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 123/471 (26%), Positives = 209/471 (44%), Gaps = 78/471 (16%)

Query: 82  FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           F   V + DVF    +++  A+ G   +A   F  MR+ +LY                  
Sbjct: 32  FNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLY------------------ 73

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
                        P    FP  ++AC +  D  +GK  H      G      V ++++ +
Sbjct: 74  -------------PTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVM 120

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGY---------------FQIGENDEAHRLF 246
           Y  CGKL  AR+ F+ + ++D V+W SMI GY                 + END+   +F
Sbjct: 121 YSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMF 180

Query: 247 -DKM-------------------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEM 280
            D M                          +     GV   N L+ +Y + G+  VA  +
Sbjct: 181 LDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVA--V 238

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP-NGVTITSAISACT 339
            +++    +  D  ++  ++S +AQ+G +++A ++F+ +    V+  N +T+++ + A +
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVS 298

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
              AL +G  IH   ++MG  DDV+VG S+I+MY KC  +E A + FD +K+K+V SW +
Sbjct: 299 HSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTA 358

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           MIAGY   G+  KA ELF  M +S V PN IT+  +++     G   E    F  M    
Sbjct: 359 MIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRF 418

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            V+     +  ++    + G    A  + ++M+     P+ +   S+L AC
Sbjct: 419 GVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK---MKPDSIIWSSLLAAC 466



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 196/424 (46%), Gaps = 61/424 (14%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH--AFLNLVTEI 89
           L  +G   EA+    S+        R+++   ++AC     I   ++ H  AF+    + 
Sbjct: 51  LARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV-FGYQS 109

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D+FV + L+ +Y+ CG L+DAR+VF+++ +R++ +W++MI  Y  +    + V LF  ++
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVSLFKDLL 169

Query: 150 ------QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
                  D +F D      ++ AC         + +HS VIK G      V N++L  Y 
Sbjct: 170 VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229

Query: 204 KCGK--LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           K G+  +  AR+ F+ + +KD V++NS++S Y Q G ++EA  +F    R  +K  VVTF
Sbjct: 230 KGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF----RRLVKNKVVTF 285

Query: 262 NILIRS----------------------------------------YNQLGQCDVAMEMV 281
           N +  S                                        Y + G+ + A +  
Sbjct: 286 NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAF 345

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
            RM++     +V +WT MI+G+  +G  ++AL+LF  M   GV PN +T  S ++AC+  
Sbjct: 346 DRMKN----KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHA 401

Query: 342 KALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNS 399
                G    +++  + G    +     ++++  +   L+ A  +   +K K D   W+S
Sbjct: 402 GLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSS 461

Query: 400 MIAG 403
           ++A 
Sbjct: 462 LLAA 465


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 214/749 (28%), Positives = 363/749 (48%), Gaps = 85/749 (11%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           +S++ +Y++CG L  A   F  +  K  V W  +IS Y   G +  A  LF ++ +E I 
Sbjct: 66  SSLVYMYLRCGSLESAIDVFHKIAHKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIA 125

Query: 256 LGVVTF-----------------------------------NILIRSYNQLGQCDVAMEM 280
           L  + F                                   + L+  Y + G    A  +
Sbjct: 126 LDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANAL 185

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
              +E      DV  W  MI+  +QNG   +AL++F  M  +G+ P+ VT  S   AC+ 
Sbjct: 186 FGHLER---HLDVVLWNAMITANSQNGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSS 242

Query: 341 LKALAMGM--EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN 398
             +L        H+   + G   DV+V  +L+N Y++C E++ A + F  + +++  SW 
Sbjct: 243 SPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARCGEIDCARKFFAEMPERNAVSWT 302

Query: 399 SMIAGYCQAGYCGKAYELFIKM--------------------------------QESDVP 426
           SMIA + Q G+   A E F  M                                QE  V 
Sbjct: 303 SMIAAFTQIGHL-LAVETFHAMLLEGVVPTRSTLFAALEGCEDLRVARLVEAIAQEIGVV 361

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALG 486
            +V     L+  Y +   +++A+ +F      ++ + + A   ++IA Y Q   + +   
Sbjct: 362 TDVAIVTDLVMAYARCDGQEDAIRVFS---AREEGEWDAALVTAMIAVYAQCRDRRSTFK 418

Query: 487 VFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR-RSLESSLPVMNSLIDTY 545
           ++         P+ +  ++ L ACA L A ++ ++IH CV   R L+  + + N+++  Y
Sbjct: 419 LWGAAIERGISPDRILYITALDACASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMY 478

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
            + G++  +R  FDGM ++D I+WN+++     HG      DLF  M   G    R  FL
Sbjct: 479 GQCGSLRDARDAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFL 538

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
           +++ A + AG+V  G + F ++T  + ++P  EHY  M+DL GR G+L +A   ++ MP+
Sbjct: 539 NLLSACAHAGLVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPV 598

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
            PD++ W AL+ ACRI+G+ +    A ER+ +L          +  IY+  G+ +DA  V
Sbjct: 599 PPDAATWMALMGACRIYGDTERGRFAAERVLELRADHTAAYVALCNIYSAAGRWDDAAAV 658

Query: 726 RKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGL 785
           RK+  +   R   G   IE+++ V+ FV    S   S+ +Y+ L+ V   +  R+ +  +
Sbjct: 659 RKIMADLGLRKIPGVSSIEIRSKVHEFVVRDRSHPQSEAIYAELERVMGAIE-RAGYRAV 717

Query: 786 C------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVS 839
                  +EEE+KE++   HSEKLA+AF ++ + Q   T+R++KN+R+CV CH  +K++S
Sbjct: 718 TGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMSTPQGS-TLRVIKNLRVCVDCHNASKFIS 776

Query: 840 MMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +   EI + D +  HHFK+G CSCGDYW
Sbjct: 777 KVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 143/605 (23%), Positives = 258/605 (42%), Gaps = 106/605 (17%)

Query: 61  INLLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           + L++ C   NSI   + LH+ ++    +  D ++ + L+ +Y +CG L+ A +VF  + 
Sbjct: 33  VRLVREC---NSIARGKLLHSKISSSPSLSRDGYLASSLVYMYLRCGSLESAIDVFHKIA 89

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
            +++  W+ +I AY         + LF  ++Q+G+  D  +F  +L AC +     AG+L
Sbjct: 90  HKSIVLWTVLISAYVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRL 149

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK-DGVAWNSMISGYFQIG 237
           +H   ++ G+     V ++++++Y +CG L  A   F  ++   D V WN+MI+   Q G
Sbjct: 150 IHRCAVEAGLGLQEIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNG 209

Query: 238 ENDEAHRLFDKM-----------------------------------CREEIKLG--VVT 260
              EA  +F +M                                   C +E  LG  VV 
Sbjct: 210 SPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLGSDVVV 269

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
              L+ +Y + G+ D A +    M       +  +WT MI+ F Q G    A++ F  M 
Sbjct: 270 ATALVNAYARCGEIDCARKFFAEMPE----RNAVSWTSMIAAFTQIGHL-LAVETFHAML 324

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
             GV+P   T+ +A+  C DL+   +   + ++A ++G   DV +   L+  Y++C+  E
Sbjct: 325 LEGVVPTRSTLFAALEGCEDLRVARL---VEAIAQEIGVVTDVAIVTDLVMAYARCDGQE 381

Query: 381 AAERVFDMIKDK--DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------ 432
            A RVF   ++   D     +MIA Y Q       ++L+    E  + P+ I +      
Sbjct: 382 DAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDA 441

Query: 433 ------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                         N ++S Y Q G+  +A D F  M   D++ 
Sbjct: 442 CASLAALSEGRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEI- 500

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
               SWN++++   Q G+  +   +FR M    F    +  L++L ACA+   +  VK  
Sbjct: 501 ----SWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAH---AGLVKA- 552

Query: 523 HGCVLRRSLESSLPVMNS------LIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICG 575
            GC    ++     V+ +      ++D   + G +  +  I   M    D  TW +L+  
Sbjct: 553 -GCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGA 611

Query: 576 YVLHG 580
             ++G
Sbjct: 612 CRIYG 616



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 136/307 (44%), Gaps = 19/307 (6%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSV 100
           A+    ++  +G    R+T    L+ C D     L   +   + +VT  DV + T L+  
Sbjct: 316 AVETFHAMLLEGVVPTRSTLFAALEGCEDLRVARLVEAIAQEIGVVT--DVAIVTDLVMA 373

Query: 101 YAKCGCLDDAREVFEDMRER--NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
           YA+C   +DA  VF    E   +    +AMI  Y++ +  R   +L+   ++ G+ PD  
Sbjct: 374 YARCDGQEDAIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRI 433

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR------NSVLAVYVKCGKLIWAR 212
           L+   L AC +      G+ +H+ V     +  RR+       N+++++Y +CG L  AR
Sbjct: 434 LYITALDACASLAALSEGRQIHACV-----AADRRLDRDVTLGNAIVSMYGQCGSLRDAR 488

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
             F+ M  +D ++WN+M+S   Q G  ++   LF  M +E      + F  L+ +    G
Sbjct: 489 DAFDGMPARDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAG 548

Query: 273 QCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
                 E    M    G+ P    + CM+    + GR + A  + + M    V P+  T 
Sbjct: 549 LVKAGCEHFSAMTGDHGVVPATEHYGCMVDLLGRKGRLADAHGIVQAMP---VPPDAATW 605

Query: 332 TSAISAC 338
            + + AC
Sbjct: 606 MALMGAC 612



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 110/503 (21%), Positives = 194/503 (38%), Gaps = 94/503 (18%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI----D 90
           NG   EA+ +   +   G      T++++ +AC  S S+  A ++  F   + E     D
Sbjct: 208 NGSPREALEIFYRMLQLGIPPDLVTFVSVFKACSSSPSLR-ASQVKGFHACLDETGLGSD 266

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           V V T L++ YA+CG +D AR+ F +M ERN  +W++MI A+++       VE F  M+ 
Sbjct: 267 VVVATALVNAYARCGEIDCARKFFAEMPERNAVSWTSMIAAFTQIGHLL-AVETFHAMLL 325

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           +G+ P       +  A   C D    +L+ ++  ++G+     +   ++  Y +C     
Sbjct: 326 EGVVPTR---STLFAALEGCEDLRVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQED 382

Query: 211 ARRFFESMDEK--DGVAWNSMISGYFQIGENDEAHRLF---------------------- 246
           A R F + +E   D     +MI+ Y Q  +     +L+                      
Sbjct: 383 AIRVFSAREEGEWDAALVTAMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDAC 442

Query: 247 ------------------DKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
                             D+    ++ LG    N ++  Y Q G    A +    M +  
Sbjct: 443 ASLAALSEGRQIHACVAADRRLDRDVTLG----NAIVSMYGQCGSLRDARDAFDGMPA-- 496

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
              D  +W  M+S  AQ+GR     DLF+ M   G     +   + +SAC          
Sbjct: 497 --RDEISWNAMLSASAQHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACA--------- 545

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
             H+  VK G                 CE   A      ++   + Y    M+    + G
Sbjct: 546 --HAGLVKAG-----------------CEHFSAMTGDHGVVPATEHY--GCMVDLLGRKG 584

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
               A+ +   +Q   VPP+  TW  L+      G+ +      +R+   +    +TA++
Sbjct: 585 RLADAHGI---VQAMPVPPDAATWMALMGACRIYGDTERGRFAAERV--LELRADHTAAY 639

Query: 469 NSLIAGYQQLGQKNNALGVFRKM 491
            +L   Y   G+ ++A  V + M
Sbjct: 640 VALCNIYSAAGRWDDAAAVRKIM 662


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 208/637 (32%), Positives = 340/637 (53%), Gaps = 32/637 (5%)

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD--VFTWTCMIS 301
           ++F+    E   LG+     L+R+Y   G+  +A  +        + P+  V  +  MI 
Sbjct: 57  KVFNLSFHENPSLGIK----LMRAYAARGEPGLARNV------FDVIPERNVIFYNVMIR 106

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
            +  N     AL +F++M   G  P+  T    + AC+    L +G+++H    K+G   
Sbjct: 107 SYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDL 166

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           ++ VGN LI +Y KC  L  A  V D ++ KDV SWNSM+AGY Q      A ++  +M 
Sbjct: 167 NLFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMD 226

Query: 422 ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK 481
                P+  T   L+       +E+  V   + M  N + K++  SWN +I+ Y +    
Sbjct: 227 GVRQKPDACTMASLLPAVTNTSSEN--VLYVEEMFMNLE-KKSLVSWNVMISVYMKNSMP 283

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
             ++ ++ +M      P+ +T  SVL AC  L A    + IH  V R+ L  ++ + NSL
Sbjct: 284 GKSVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSL 343

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
           ID YA+ G +  ++ +FD M  +D+ +W SLI  Y + G  + A+ LF +M++ G  P+ 
Sbjct: 344 IDMYARCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDS 403

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
             F++I+ A S +G+++ GK  F  +T+ Y+I P+IEH++ ++DL GRSG+++EA   I+
Sbjct: 404 IAFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIK 463

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPED 721
            MP++P+  +W ALL++CR++ N+D+ +LA ++L  L P +     L+  IYA  G+  +
Sbjct: 464 QMPMKPNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTE 523

Query: 722 ALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ----------N 771
              +R L +    R   G   +E+ N V+TF+ G      S  +Y  L            
Sbjct: 524 VTAIRSLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGY 583

Query: 772 VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHC 831
           VP+  +A        +EEE+KE    +HSEKLA+ FA++ + ++P  IRI KN+R+C  C
Sbjct: 584 VPKTDSALHD-----VEEEDKECHLAVHSEKLAIVFAILNTQESP--IRITKNLRVCGDC 636

Query: 832 HETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           H  AK +S +   EI + D+   HHFK+G CSCGDYW
Sbjct: 637 HIAAKLISKIVQREIVIRDTNRFHHFKDGICSCGDYW 673



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 203/398 (51%), Gaps = 6/398 (1%)

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
           KL+  YA  G    AR VF+ + ERN+  ++ MI +Y  +  + + + +F  MV  G  P
Sbjct: 72  KLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSP 131

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D + +P +L+AC    +   G  +H  V K+G+     V N ++A+Y KCG L  AR   
Sbjct: 132 DHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCVL 191

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           + M  KD V+WNSM++GY Q  + D+A  +  +M     K    T   L+ +       +
Sbjct: 192 DEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDGVRQKPDACTMASLLPAVTNTSSEN 251

Query: 276 V--AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
           V    EM   +E   +     +W  MIS + +N    +++DL+ +M    V P+ +T  S
Sbjct: 252 VLYVEEMFMNLEKKSLV----SWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCAS 307

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            + AC DL AL +G  IH    +     ++L+ NSLI+MY++C  LE A+RVFD +K +D
Sbjct: 308 VLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRD 367

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ 453
           V SW S+I+ Y   G    A  LF +MQ S   P+ I +  ++S    +G  +E    F+
Sbjct: 368 VASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGKFYFK 427

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           +M  + K+      +  L+    + G+ + A  + ++M
Sbjct: 428 QMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQM 465



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/339 (20%), Positives = 148/339 (43%), Gaps = 69/339 (20%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFV 93
           N   ++A+ V   + + G      TY  +L+AC  S+++ +  +LH A   +  ++++FV
Sbjct: 111 NHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFV 170

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+++Y KCGCL +AR V ++M+ +++ +W++M+  Y+++ ++ + +++   M  DG+
Sbjct: 171 GNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREM--DGV 228

Query: 154 F--PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
              PD      +L A  N                                      +++ 
Sbjct: 229 RQKPDACTMASLLPAVTN---------------------------------TSSENVLYV 255

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
              F ++++K  V+WN MIS Y +     ++  L+ +M + E++   +T   ++R+   L
Sbjct: 256 EEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGDL 315

Query: 272 GQCDVAMEMVKRMESLGITP-------------------------------DVFTWTCMI 300
               +   + + +E   + P                               DV +WT +I
Sbjct: 316 SALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFRDVASWTSLI 375

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           S +   G+   A+ LF EM   G  P+ +   + +SAC+
Sbjct: 376 SAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACS 414



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 1/121 (0%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T  ++L+AC D +++ L R++H ++       ++ ++  L+ +YA+CGCL+DA+ VF+ M
Sbjct: 304 TCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRM 363

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
           + R++ +W+++I AY    +    V LF  M   G  PD   F  IL AC + G    GK
Sbjct: 364 KFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEGK 423

Query: 178 L 178
            
Sbjct: 424 F 424



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 1/145 (0%)

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           +K +H  V   S   +  +   L+  YA  G    +R +FD +  +++I +N +I  Y+ 
Sbjct: 51  LKNVHSKVFNLSFHENPSLGIKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMN 110

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           +  +  AL +F  M S G  P+  T+  ++ A S +  + +G ++  ++ +    + +  
Sbjct: 111 NHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFV 170

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDM 663
             + +I LYG+ G L EA   +++M
Sbjct: 171 G-NGLIALYGKCGCLPEARCVLDEM 194


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 219/714 (30%), Positives = 357/714 (50%), Gaps = 86/714 (12%)

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
           N+++S Y +      A R+FD+M +  +     ++N L+ SY++L  C   ME   R+  
Sbjct: 48  NNLVSAYAKFDRITYARRVFDQMPQRNL----YSWNTLLSSYSKLA-CLPEME---RVFH 99

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP-NGVTITSAISACTDLKALA 345
              T D+ +W  +IS +A  G   Q++  +  M + G    N + +++ +   +    + 
Sbjct: 100 AMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPFNLNRIALSTMLILASKQGCVH 159

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSK------------------------------ 375
           +G+++H   VK GF   V VG+ L++MYSK                              
Sbjct: 160 LGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLM 219

Query: 376 -CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ------------- 421
            C  +E + ++F  +++KD  SW +MIAG+ Q G   +A +LF +M+             
Sbjct: 220 RCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLFREMRLENLEMDQYTFGS 279

Query: 422 ----------------------ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
                                  +D   N+   + L+  Y +  +   A  +F++M    
Sbjct: 280 VLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRKMNC-- 337

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
              +N  SW +++ GY Q G    A+ +F  MQ++   P+  T+ SV+ +CA L +  + 
Sbjct: 338 ---KNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEG 394

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
            + H   L   L S + V N+L+  Y K G+I  S  +F  MS  D ++W +L+ GY   
Sbjct: 395 AQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEVSWTALVSGYAQF 454

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
           G  +  L LF+ M + G KP++ TF+ ++ A S AG+V  G ++F S+ + ++IIP+ +H
Sbjct: 455 GKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDH 514

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
           Y+ MIDL+ R+G+LEEA +FI  MP  PD+  W +LL++CR H N+++   A E L  LE
Sbjct: 515 YTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLE 574

Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSE 759
           P +     L+  IYA  GK E+   +RK  R+   R   G  WI+ KN V+ F     S 
Sbjct: 575 PHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSN 634

Query: 760 SYSDLLYSWLQN-----VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQ 814
            +SD +YS L+      V E      +     +++ EK ++   HSEKLA+AF LI    
Sbjct: 635 PFSDQIYSELEKLNYKMVQEGYVPDMNSVLHDVDDSEKIKMLNHHSEKLAIAFGLIFIPP 694

Query: 815 APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
               IR+VKN+R+C  CH   KY+S +   EI + D+   H FK+G+CSCGD+W
Sbjct: 695 GL-PIRVVKNLRVCGDCHNATKYISKITQREILVRDAARFHLFKDGRCSCGDFW 747



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 159/603 (26%), Positives = 270/603 (44%), Gaps = 127/603 (21%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           N Y  LL+ C D+  IH    + AF N     ++F+   L+S YAK   +  AR VF+ M
Sbjct: 16  NHYCELLKHCRDTKKIH-CHIIKAFRN----PEIFLLNNLVSAYAKFDRITYARRVFDQM 70

Query: 118 RERNLYTWSAMIGAYS-----------------RDQ-RWREV-------------VELFF 146
            +RNLY+W+ ++ +YS                 RD   W  +             V+ + 
Sbjct: 71  PQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYN 130

Query: 147 LMVQDGLFP-DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
           LM+ +G F  +      +L      G    G  +H  V+K G      V + ++ +Y K 
Sbjct: 131 LMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKT 190

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G +  AR+ F+ M EK+ V +N++I+G  +    +++ +LF  M  +             
Sbjct: 191 GLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEK------------- 237

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
                                     D  +WT MI+GF QNG   +A+DLF+EM    + 
Sbjct: 238 --------------------------DSISWTAMIAGFTQNGLDREAIDLFREMRLENLE 271

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
            +  T  S ++AC  + AL  G ++H+  ++  + D++ VG++L++MY KC+ +++AE V
Sbjct: 272 MDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETV 331

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------- 432
           F  +  K+V SW +M+ GY Q GY  +A ++F  MQ + + P+  T              
Sbjct: 332 FRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASL 391

Query: 433 ----------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
                                 N L++ Y + G+ +++  LF  M   D+V     SW +
Sbjct: 392 EEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYVDEV-----SWTA 446

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           L++GY Q G+ N  L +F  M +  F P+ VT + VL AC+      K  +I   +++  
Sbjct: 447 LVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKE- 505

Query: 531 LESSLPVMNS---LIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLH-----GF 581
               +P+ +    +ID ++++G +  +R   + M  S D I W SL+     H     G 
Sbjct: 506 -HRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGK 564

Query: 582 WHA 584
           W A
Sbjct: 565 WAA 567



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 158/315 (50%), Gaps = 5/315 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFV 93
           NG   EAI +   +  +  ++ + T+ ++L AC    ++   +++HA++      D +FV
Sbjct: 252 NGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFV 311

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +Y KC  +  A  VF  M  +N+ +W+AM+  Y ++    E V++F  M  +G+
Sbjct: 312 GSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGI 371

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PDDF    ++ +C N    E G   H   +  G+     V N+++ +Y KCG +  + R
Sbjct: 372 EPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHR 431

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F  M   D V+W +++SGY Q G+ +E  RLF+ M     K   VTF  ++ + ++ G 
Sbjct: 432 LFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGL 491

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
                ++ + M +   I P    +TCMI  F++ GR  +A     +M F    P+ +   
Sbjct: 492 VQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFS---PDAIGWA 548

Query: 333 SAISACTDLKALAMG 347
           S +S+C   + + +G
Sbjct: 549 SLLSSCRFHRNMEIG 563



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 198/427 (46%), Gaps = 56/427 (13%)

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           + E +V +   L++   +C  ++D+R++F DM+E++  +W+AMI  ++++   RE ++LF
Sbjct: 203 MPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLF 262

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M  + L  D + F  +L ACG     + GK +H+ +I+        V ++++ +Y KC
Sbjct: 263 REMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKC 322

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---------------- 249
             +  A   F  M+ K+ V+W +M+ GY Q G ++EA ++F  M                
Sbjct: 323 KSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVI 382

Query: 250 ----------------CREEIKLGVVTF----NILIRSYNQLGQCDVAMEMVKRMESLGI 289
                           CR  +  G+++F    N L+  Y + G  + +  +   M  +  
Sbjct: 383 SSCANLASLEEGAQFHCRALVS-GLISFITVSNALVTLYGKCGSIEDSHRLFSEMSYV-- 439

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             D  +WT ++SG+AQ G+ ++ L LF+ M   G  P+ VT    +SAC+    +  G +
Sbjct: 440 --DEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQ 497

Query: 350 IHSLAVK----MGFTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAG- 403
           I    +K    +   D       +I+++S+   LE A +  + M    D   W S+++  
Sbjct: 498 IFESMIKEHRIIPIEDHY---TCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSC 554

Query: 404 -YCQAGYCGK-AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
            + +    GK A E  +K++    P N  ++ +L S Y   G  +E  +L + M      
Sbjct: 555 RFHRNMEIGKWAAESLLKLE----PHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLR 610

Query: 462 KRNTASW 468
           K    SW
Sbjct: 611 KEPGCSW 617



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 80/187 (42%), Gaps = 33/187 (17%)

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD---------- 559
           C  L      K+IH  +++      + ++N+L+  YAK   I Y+R +FD          
Sbjct: 19  CELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYSW 78

Query: 560 ---------------------GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG-L 597
                                 M ++D+++WNSLI  Y   GF   ++  ++ M   G  
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGPF 138

Query: 598 KPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
             NR    ++++  S  G V LG +V   + + +     +   S ++D+Y ++G +  A 
Sbjct: 139 NLNRIALSTMLILASKQGCVHLGLQVHGHVVK-FGFQSYVFVGSPLVDMYSKTGLVFCAR 197

Query: 658 EFIEDMP 664
           +  ++MP
Sbjct: 198 QAFDEMP 204


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 204/611 (33%), Positives = 326/611 (53%), Gaps = 40/611 (6%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P + +W  +I  + +N R++ A+ LF ++     +P+  T+   +  C  L AL  G +I
Sbjct: 78  PTLVSWNLLIKCYIENQRSNDAIALFCKL-LCDFVPDSFTLPCVLKGCARLGALQEGKQI 136

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H L +K+GF  D  V +SL++MYSKC E+E   +VFD ++DKDV SWNS+I GY + G  
Sbjct: 137 HGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEI 196

Query: 411 GKAYELFIKMQESD--------------------------VP-PNVITWNVLISGYIQNG 443
             A E+F +M E D                          +P  N ++WN +I+GY++ G
Sbjct: 197 ELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAG 256

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           + + A +LF +M +     R+  +WNS+I GY++  Q   AL +F  M      PN  TI
Sbjct: 257 DSNTAKELFDQMPE-----RSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTI 311

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
           L  + A + +V+    + +H  +++   ++   +   LI+ Y+K G++  +  +F  +  
Sbjct: 312 LGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPK 371

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           K +  W S+I G  +HG     L+LFD+M   GLKP+  TF+ ++ A S AG  +   + 
Sbjct: 372 KKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRY 431

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           F  +T  Y I P IEHY  +ID+  R+G LEEA + IE MPI+ +  IW +LL+  R HG
Sbjct: 432 FKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHG 491

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
           NI +   A + L DL P       ++  +YA  G  E   +VR++ ++   +   G   I
Sbjct: 492 NIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSI 551

Query: 744 EVKNLVYTFVTGGWSESYSDLLYSWLQNVPE--NVTAR---SSHSGLCIEEE-EKEEISG 797
           E +  ++ F+ G  S   ++ +Y  L  + +  NV      ++   LC+EE+ EKE    
Sbjct: 552 EHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHIPDTTQVLLCLEEDNEKEAELE 611

Query: 798 IHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF 857
            HSE+LA+AF L+        IRI+KN+R+C  CH   K +S +++ EI + D    HHF
Sbjct: 612 THSERLAIAFGLLNIKHGS-PIRIIKNLRICNDCHAVTKLLSHIYNREIIIRDGSRFHHF 670

Query: 858 KNGQCSCGDYW 868
           K+G CSC D+W
Sbjct: 671 KSGSCSCKDFW 681



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/507 (28%), Positives = 241/507 (47%), Gaps = 80/507 (15%)

Query: 76  ARKLHAFLNLVTEID-VFVKTKLLSVYA--KCGCLDDAREVFEDMRERNLYTWSAMIGAY 132
           A +LHA       ++   V ++LL++YA  +   L  A  +F+ ++E  L +W+ +I  Y
Sbjct: 31  ANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCY 90

Query: 133 SRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR 192
             +QR  + + LF  ++ D   PD F  P +L+ C   G  + GK +H LV+K+G    +
Sbjct: 91  IENQRSNDAIALFCKLLCD-FVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDK 149

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
            V +S++++Y KCG++   R+ F+ M++KD V+WNS+I GY + GE + A  +F++M  +
Sbjct: 150 FVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEK 209

Query: 253 EI--------------KL-------------GVVTFNILIRSYNQLGQCDVAMEMVKRME 285
           +               KL               V++N +I  Y + G  + A E+  +M 
Sbjct: 210 DSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMP 269

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
              +     TW  MI+G+ +N + ++AL LF+ M    + PN  TI  A+SA + + +L 
Sbjct: 270 ERSLV----TWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLG 325

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
            G  +HS  VK GF  D ++G  LI MYSKC  +++A RVF  I  K +  W S+I G  
Sbjct: 326 TGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLG 385

Query: 406 QAGYCGKAYELFIKMQESDVPPNVIT---------------------------------- 431
             G   +  ELF +M  + + P+ IT                                  
Sbjct: 386 MHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSI 445

Query: 432 --WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
             +  LI    + G+ +EA D  +RM     +K N   W SL++G ++ G  N  +G + 
Sbjct: 446 EHYGCLIDVLCRAGHLEEAKDTIERM----PIKANKVIWTSLLSGSRKHG--NIRMGEYA 499

Query: 490 KMQSSCFYPN---CVTILSVLPACAYL 513
                   P+   C  ILS + A A L
Sbjct: 500 AQHLIDLAPDTTGCYVILSNMYAAAGL 526


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 216/651 (33%), Positives = 329/651 (50%), Gaps = 79/651 (12%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P +  W  M  G A +     AL L+  M  +G++PN  T    + +C    A   G ++
Sbjct: 66  PXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQL 125

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV------------------------- 385
           H   +K GF  D+ +  SLI+MY +   LE A++V                         
Sbjct: 126 HGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXI 185

Query: 386 ------FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN----------- 428
                 FD I  KDV SWN+ I+GY + G   +A ELF KM +++V P+           
Sbjct: 186 ESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSAC 245

Query: 429 -----------VITW-------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                      V +W             N LI  Y + G  + A  LFQ +   D +   
Sbjct: 246 AQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVI--- 302

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             SWN+LI GY  +     AL +F+ M  S   PN VT+LS+L ACA+L A +  + IH 
Sbjct: 303 --SWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHV 360

Query: 525 CVLRR--SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
            + +R   + ++  +  SLID YAK G+I  ++ +FD M ++ + +WN++I G+ +HG  
Sbjct: 361 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRA 420

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
           +AA D+F +M+  G++P+  TF+ ++ A S +GM+DLG+ +F S+T  Y+++P +EHY  
Sbjct: 421 NAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGC 480

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           MIDL G SG  +EA + I  M +EPD  IW +LL AC++HGN++L     + L  +EP +
Sbjct: 481 MIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPEN 540

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGW----- 757
                L+  IYA   +  +  K R L  +   +   G   IE+ ++V+ F+ G       
Sbjct: 541 PGSYVLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 600

Query: 758 SESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
            E Y  L    +          +S     +EEE KE     HSEKLA+AF LI S++   
Sbjct: 601 REIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI-STKPGT 659

Query: 818 TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            + IVKN+R+C +CHE  K +S ++  EI   D    HHF++G+CSC DYW
Sbjct: 660 KLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 229/505 (45%), Gaps = 73/505 (14%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A  VF+ ++E  L  W+ M   ++        ++L+  MV  GL P+ + FP +L++C  
Sbjct: 56  AISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAK 115

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
              F+ G+ +H  V+K G      +  S++++YV+ G+L  A++  +    +D V++ ++
Sbjct: 116 SXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTAL 175

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           I+GY   G  + AH++FD++  ++    VV++N  I  Y + G    A+E+ K+M    +
Sbjct: 176 ITGYASRGXIESAHKMFDEIPVKD----VVSWNAXISGYAETGNYKEALELFKKMMKTNV 231

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            PD  T   ++S  AQ+G                                   ++ +G +
Sbjct: 232 RPDESTMVTVLSACAQSG-----------------------------------SIELGRQ 256

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +HS     GF  ++ + N+LI++YSKC ELE A  +F  + +KDV SWN++I GY     
Sbjct: 257 VHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNL 316

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED----------------------- 446
             +A  LF  M  S   PN +T   ++S     G  D                       
Sbjct: 317 YKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 376

Query: 447 -EAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
              +D++ + G         +  + R+ +SWN++I G+   G+ N A  +F +M+ +   
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIE 436

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSRT 556
           P+ +T + +L AC++    +  + I   + R   L   L     +ID    SG    +  
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEK 496

Query: 557 IFDGMS-SKDIITWNSLICGYVLHG 580
           + + M    D + W SL+    +HG
Sbjct: 497 MINTMEMEPDGVIWCSLLKACKMHG 521



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 159/357 (44%), Gaps = 65/357 (18%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREV---- 113
           T+  LL++C  S +    ++LH   L    ++D+++ T L+S+Y + G L+DA++V    
Sbjct: 105 TFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKS 164

Query: 114 ---------------------------FEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
                                      F+++  +++ +W+A I  Y+    ++E +ELF 
Sbjct: 165 SHRDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFK 224

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M++  + PD+     +L AC   G  E G+ +HS +   G     ++ N+++ +Y KCG
Sbjct: 225 KMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCG 284

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           +L  A   F+ +  KD ++WN++I GY  +    EA  LF  M R   K   VT   ++ 
Sbjct: 285 ELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILS 344

Query: 267 SYNQLGQCDVA------------------------MEMVKRMESLGITPDVF-------- 294
           +   LG  D+                         ++M  +   +     VF        
Sbjct: 345 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSL 404

Query: 295 -TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
            +W  MI GFA +GR + A D+F  M   G+ P+ +T    +SAC+    L +G  I
Sbjct: 405 SSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHI 461



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 156/307 (50%), Gaps = 7/307 (2%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-LVTEIDVFVK 94
           G   EA+ +   +     +   +T + +L AC  S SI L R++H+++N      ++ + 
Sbjct: 214 GNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIV 273

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+ +Y+KCG L+ A  +F+ +  +++ +W+ +IG Y+    ++E + LF  M++ G  
Sbjct: 274 NALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEK 333

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKL--GMSCVRRVRNSVLAVYVKCGKLIWAR 212
           P+D     IL AC + G  + G+ +H  + K   G++    +R S++ +Y KCG +  A+
Sbjct: 334 PNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQ 393

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + F+SM  +   +WN+MI G+   G  + A  +F +M +  I+   +TF  L+ + +  G
Sbjct: 394 QVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSG 453

Query: 273 QCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
             D+   + + M     + P +  + CMI     +G   +A  +   M    + P+GV  
Sbjct: 454 MLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTME---MEPDGVIW 510

Query: 332 TSAISAC 338
            S + AC
Sbjct: 511 CSLLKAC 517


>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
 gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
          Length = 852

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 215/773 (27%), Positives = 366/773 (47%), Gaps = 110/773 (14%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           +G   EA  +   +   G ++    +  + +AC    S+ L R+LH   +     ++++V
Sbjct: 138 HGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYV 197

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRER--------------------------------- 120
              L+ +Y KCG LDDA++V   M ER                                 
Sbjct: 198 SNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDY 257

Query: 121 ---NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
              N+ +WSA+IG ++++    E +E+ F M  +GL P+      +L AC      + GK
Sbjct: 258 SMPNVVSWSAVIGGFAQNGYDEEAIEMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGK 317

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H  + +        V N+++ VY +CG +  A + F     K+ ++ N+MI GY    
Sbjct: 318 QLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKFSVKNVLSCNTMIVGY---- 373

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                       C                     G    A E+   M+ LGI   + +W 
Sbjct: 374 ------------CES-------------------GDVSKAKELFDCMDVLGIERGLISWN 402

Query: 298 CMISGFAQNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
            +ISG+ +N    +A  +F+ M    G+ P+  T+ S ++AC D  +L  G EIH+ A+ 
Sbjct: 403 SIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIV 462

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G   D  VG +L+ MYSKC++L AA+  FD + +KDV                      
Sbjct: 463 KGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDV---------------------- 500

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
                         TWN LISGY ++   +    L ++M K D    N  +WNS++AG  
Sbjct: 501 -------------PTWNALISGYTRSNQIERIQYLLEKM-KGDGYHPNIYTWNSILAGLV 546

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           +  Q +  + +F +MQ S   P+  T+  +LPAC+ L    + K+ H   ++   ++ + 
Sbjct: 547 ENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVH 606

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           +  +L+D YAK G++ Y++  +D +S+ ++++ N+++    +HG     + LF  M + G
Sbjct: 607 IGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALG 666

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
             P+  TFLS++ +    G V+ G + F  +   Y + P ++HY++M+DL  RSG+L EA
Sbjct: 667 FIPDHVTFLSVLSSCVHVGSVETGCEFF-DLMGYYNVKPTLKHYTSMVDLLSRSGQLHEA 725

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
            E I+ MP+E DS +W ALL  C  HGNI+L  +A ERL +LEP +     L+  ++A  
Sbjct: 726 YELIKKMPVECDSVLWGALLGGCVTHGNIELGEIAAERLIELEPNNSGNYVLLANLHAYA 785

Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
            +  D  +VR + ++     S G  WIE KN +++F+    S   ++ +Y+ L
Sbjct: 786 RRWTDLARVRGMMKDRGMHKSPGCSWIEDKNEIHSFLACDRSHKRAEEIYATL 838



 Score =  269 bits (687), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 194/705 (27%), Positives = 325/705 (46%), Gaps = 115/705 (16%)

Query: 16  LTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHL 75
           LT  S  + +  H        +     ++LD+     +K     Y ++L +C       L
Sbjct: 26  LTALSFQKLKQAHQPVNISQQKNRSNFSLLDNKPLNTSK-----YASVLDSC---KCPKL 77

Query: 76  ARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
            +++HA  +    + D F+ TKLL +YA+CG L DA  +FE M  RNL++W A++  Y  
Sbjct: 78  GKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVYLD 137

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
              + E   LF ++  DG+  D F+FP + +AC   G  E G+ +H LVIK        V
Sbjct: 138 HGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYV 197

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
            N+++ +Y KCG L                               D+A ++  KM   + 
Sbjct: 198 SNALIDMYGKCGSL-------------------------------DDAKKVLVKMPERD- 225

Query: 255 KLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT-PDVFTWTCMISGFAQNGRTSQAL 313
               VT+N +I +    G    A+E +++M+SL  + P+V +W+ +I GFAQNG   +A+
Sbjct: 226 ---SVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAI 282

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
           ++   M   G++PN  T+   + AC  L+ L +G ++H    +  F  + +V N+L+++Y
Sbjct: 283 EMLFRMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVY 342

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
            +C ++  A ++F     K+V S N+MI GYC++G   KA ELF  M    +   +I+WN
Sbjct: 343 RRCGDMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWN 402

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
            +ISGY++N   DEA  +FQ M   + ++                               
Sbjct: 403 SIISGYVRNFMFDEAFSMFQNMLMEEGIE------------------------------- 431

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
               P+  T+ SVL ACA  ++  + KEIH   + + L+S   V  +L++ Y+K  ++  
Sbjct: 432 ----PDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTA 487

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           ++  FD +  KD+ TWN+LI GY           L ++MK  G  PN  T+ SI+     
Sbjct: 488 AQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVE 547

Query: 614 AGMVDLGKKVFCSI------TECYQ---IIPMIEHY------------------------ 640
              +DL  ++F  +       + Y    I+P                             
Sbjct: 548 NRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHI 607

Query: 641 -SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
            +A++D+Y + G L+ A +   D    P+     A+LTAC +HG+
Sbjct: 608 GAALVDMYAKCGSLKYA-QLAYDRISNPNLVSHNAMLTACAMHGH 651



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 131/259 (50%), Gaps = 13/259 (5%)

Query: 475 YQQLGQKNNALGVFRKMQSSCFY-----P-NCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           +Q+L Q +  + + ++   S F      P N     SVL +C         K++H   ++
Sbjct: 31  FQKLKQAHQPVNISQQKNRSNFSLLDNKPLNTSKYASVLDSCK---CPKLGKQVHAHTIK 87

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
              ++   +   L+  YA+ G +  +  +F+ M  +++ +W +++  Y+ HG +  A  L
Sbjct: 88  TGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLL 147

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F  ++  G++ +   F  +  A S  G V+LG+++   + + ++    I   +A+ID+YG
Sbjct: 148 FQVLQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIK-FRFCLNIYVSNALIDMYG 206

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL--FDLEPGDVLIQ 706
           + G L++A + +  MP E DS  W +++TAC  +G +  A+  +E++   D    +V+  
Sbjct: 207 KCGSLDDAKKVLVKMP-ERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSW 265

Query: 707 RLILQIYAICGKPEDALKV 725
             ++  +A  G  E+A+++
Sbjct: 266 SAVIGGFAQNGYDEEAIEM 284


>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Brachypodium distachyon]
          Length = 742

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 224/733 (30%), Positives = 369/733 (50%), Gaps = 88/733 (12%)

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNC-GDFEAGKLMHSLVIKLGM-SCVRRVRNSVLAV 201
           L+  M + G+  D F F  + + C          +++H+   +  + S V  V N ++ +
Sbjct: 90  LYRRMRRTGVCTDAFTFHFLFKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHM 149

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           YV+ G    ARR F+ +  KD VAW ++ISG  ++G  D+A                  +
Sbjct: 150 YVELGLAGDARRAFDDIPVKDAVAWTTVISGLAKLGLLDDA------------------W 191

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
            +L  S  +                     +V +WT +ISG+++ GR ++A+D F  M  
Sbjct: 192 CLLRHSPAR---------------------NVISWTGLISGYSRAGRAAEAVDCFNSMLS 230

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
            G+ P+ VT+   +SAC  LK L  G  +H L  + G      +  +LI+MY+KC     
Sbjct: 231 DGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKC----- 285

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
                                     G  G+A+E+F  +     P    +WN +I GY +
Sbjct: 286 --------------------------GDIGRAWEVFDALGRGRRPQ---SWNAMIDGYCK 316

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G+ D A  LF +M   D V     ++NSLI GY   G+   AL +F +M+      +  
Sbjct: 317 LGHVDVARYLFDQMEDRDLV-----TFNSLITGYIHGGRLREALLLFMQMRRHDLRADNF 371

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           T++S+L ACA L A  + + +H C+ +R +E  + +  +L+D Y K G +  +  +F  M
Sbjct: 372 TMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAM 431

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
           S +D+ TW+++I G   +G   AAL+ F  MK  G +PN  T+++I+ A S + ++D G+
Sbjct: 432 SVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGR 491

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
             F  +   + I P+IEHY  MIDL GRSG L+EAM+ +  MP++P++ IW ++L+ACR+
Sbjct: 492 LYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMPMQPNAVIWASILSACRV 551

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H + +LA  A E L  LEP +  +   +  IY    + EDA ++R+L  E   + + G  
Sbjct: 552 HKDANLARNAAEHLLKLEPDEDAVYVQLYNIYIDSRQWEDASQIRRLMEERGVKKAAGYS 611

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEIS 796
            I V   V+ F+    +      + + ++ +   +     +  +S   + ++EEEKE   
Sbjct: 612 SITVAGQVHKFIVCDRTHPQIMEITAMMEEITRRLKSVGYSPITSQITVDVDEEEKEHAL 671

Query: 797 GIHSEKLALAFALIGSSQAPH-TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
             HSEK+A+AF LI  S AP+  + I+KN+R+C  CH   K +S + + EI + D    H
Sbjct: 672 LAHSEKIAIAFGLI--SLAPNLPLHIIKNLRVCEDCHSAIKLISRIWNREIIVRDRSRFH 729

Query: 856 HFKNGQCSCGDYW 868
           HF++G CSC D+W
Sbjct: 730 HFRDGTCSCNDFW 742



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 192/422 (45%), Gaps = 43/422 (10%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D    T ++S  AK G LDDA  +      RN+ +W+ +I  YSR  R  E V+ F  M+
Sbjct: 170 DAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEAVDCFNSML 229

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            DG+ PD+     +L AC    D   G+ +H LV + GM    ++  +++ +Y KCG + 
Sbjct: 230 SDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYAKCGDIG 289

Query: 210 WARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
            A   F+++   +   +WN+MI GY ++G  D A  LFD+M   ++    VTFN LI  Y
Sbjct: 290 RAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDL----VTFNSLITGY 345

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
              G                                   R  +AL LF +M    +  + 
Sbjct: 346 IHGG-----------------------------------RLREALLLFMQMRRHDLRADN 370

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            T+ S ++AC  L AL  G  +H+   +     D+ +G +L++MY KC  +E A  VF  
Sbjct: 371 FTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQA 430

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           +  +DV++W++MIAG    G    A E F  M+     PN +T+  +++    +   DE 
Sbjct: 431 MSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEG 490

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
              F+ M     ++     +  +I    + G  + A+ + R M      PN V   S+L 
Sbjct: 491 RLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGLLDEAMDLVRTMP---MQPNAVIWASILS 547

Query: 509 AC 510
           AC
Sbjct: 548 AC 549



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 179/417 (42%), Gaps = 42/417 (10%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN----------L 85
           GR  EA+   +S+ + G +    T I LL AC     +   R LH  +           +
Sbjct: 216 GRAAEAVDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLV 275

Query: 86  VTEIDVFVK-----------------------TKLLSVYAKCGCLDDAREVFEDMRERNL 122
           V  ID++ K                         ++  Y K G +D AR +F+ M +R+L
Sbjct: 276 VALIDMYAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDL 335

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            T++++I  Y    R RE + LF  M +  L  D+F    +L AC + G    G+ +H+ 
Sbjct: 336 VTFNSLITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHAC 395

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           + +  +     +  ++L +Y+KCG++  A   F++M  +D   W++MI+G    G    A
Sbjct: 396 IEQRLVEVDIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAA 455

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMIS 301
              F  M  +  +   VT+  ++ + +     D      + M  L  I P +  + CMI 
Sbjct: 456 LEYFFWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMID 515

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
              ++G   +A+DL + M    + PN V   S +SAC   K   +        +K+   +
Sbjct: 516 LLGRSGLLDEAMDLVRTMP---MQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDE 572

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
           D  V   L N+Y    + E A ++  +++++ V       AGY      G+ ++  +
Sbjct: 573 DA-VYVQLYNIYIDSRQWEDASQIRRLMEERGV----KKAAGYSSITVAGQVHKFIV 624



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 168/388 (43%), Gaps = 43/388 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
            GRL EA+ +   +     +    T ++LL AC    ++   R LHA +   + E+D+++
Sbjct: 348 GGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEVDIYL 407

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T LL +Y KCG +++A  VF+ M  R+++TWSAMI   + +   +  +E FF M  DG 
Sbjct: 408 GTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYFFWMKVDGF 467

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR------NSVLAVYVKCGK 207
            P+   +  IL AC +    + G+L         M  +  +R        ++ +  + G 
Sbjct: 468 QPNSVTYIAILTACSHSCLLDEGRLYFE-----EMRLLHNIRPLIEHYGCMIDLLGRSGL 522

Query: 208 LIWARRFFESMD-EKDGVAWNSMISGY-----FQIGENDEAHRLFDKMCREEIKLGVVTF 261
           L  A     +M  + + V W S++S         +  N   H L  K+  +E  + V  +
Sbjct: 523 LDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLL--KLEPDEDAVYVQLY 580

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG----FAQNGRTSQAL---- 313
           NI I S     Q + A ++ + ME  G+       +  ++G    F    RT   +    
Sbjct: 581 NIYIDSR----QWEDASQIRRLMEERGVKKAAGYSSITVAGQVHKFIVCDRTHPQIMEIT 636

Query: 314 ----DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN-- 367
               ++ + +  VG  P    ITS I+   D +     +  HS  + + F    L  N  
Sbjct: 637 AMMEEITRRLKSVGYSP----ITSQITVDVDEEEKEHALLAHSEKIAIAFGLISLAPNLP 692

Query: 368 -SLINMYSKCEELEAAERVFDMIKDKDV 394
             +I     CE+  +A ++   I ++++
Sbjct: 693 LHIIKNLRVCEDCHSAIKLISRIWNREI 720


>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 202/582 (34%), Positives = 312/582 (53%), Gaps = 46/582 (7%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           +V  W   +  FA+    + A+ LF  +    + P+  T +  + AC+ L  +  G  +H
Sbjct: 77  EVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVH 136

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
               K+G   ++ + N ++++Y+ C E+  A +VFD                        
Sbjct: 137 GYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFD------------------------ 172

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                  KM + DV    ITWN++I+  ++ G+ + A  LF  M +     RN  SW S+
Sbjct: 173 -------KMPQRDV----ITWNIMIARLVKMGDAEGAYKLFAEMPE-----RNVRSWTSM 216

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           I GY Q G+   A+ +F +M+ +   PN VT+++VL ACA +      + IH    R   
Sbjct: 217 IGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGY 276

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
           E ++ V N+LID Y K G +  +  IFD M  + +++W+++I G   HG    AL LF++
Sbjct: 277 EKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNK 336

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           M + G+KPN  TF+ I+ A S  GMV+ G+K F S+T  Y I+P IEHY  M+DL+ R+G
Sbjct: 337 MINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAG 396

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
            L+EA EFI +MPI P+  +W ALL  C++H NI LA  A   L  L+P +     ++  
Sbjct: 397 LLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSN 456

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY-SW-- 768
           IYA  G+ ED  +VRKL R+   + + G   I V+ +VY FV G  +   ++ ++ +W  
Sbjct: 457 IYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEK 516

Query: 769 -LQNVP-ENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIR 826
            LQ +  +     +S   L +EE++KE+    HSEKLA+ F LI ++     IRI+KN+R
Sbjct: 517 LLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGT-VIRIMKNLR 575

Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +C  CH   K +S++   EI + D    H FKNG CSCGDYW
Sbjct: 576 VCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 134/550 (24%), Positives = 244/550 (44%), Gaps = 68/550 (12%)

Query: 77  RKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           ++LHA  L   + +     +++ SV A       A+ +F+ +    +  W+  + +++  
Sbjct: 32  KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEG 91

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
               + + LF+ + +  + PD +    +L+AC    D   GK++H  V KLG+     ++
Sbjct: 92  DSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQ 151

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N ++ +Y  CG++  AR+                               +FDKM + +  
Sbjct: 152 NMIVHLYALCGEIGVARK-------------------------------VFDKMPQRD-- 178

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             V+T+NI+I    ++G  + A ++   M       +V +WT MI G+AQ G++ +A+DL
Sbjct: 179 --VITWNIMIARLVKMGDAEGAYKLFAEMPE----RNVRSWTSMIGGYAQCGKSKEAIDL 232

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           F EM   G++PN VT+ + + AC D+  L +G  IH  + + G+  ++ V N+LI+MY K
Sbjct: 233 FLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVK 292

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
           C  LE A R+FD ++++ V SW++MIAG    G    A  LF KM  + V PN +T+  +
Sbjct: 293 CGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGI 352

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           +      G  ++    F  M ++  +      +  ++  + + G    A      M  + 
Sbjct: 353 LHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIA- 411

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS----LIDTYAKSG-- 549
             PN V   ++L  C         +E       R L    P+ +     L + YA++G  
Sbjct: 412 --PNGVVWGALLGGCKVHKNIKLAEEA-----TRHLSKLDPLNDGYYVVLSNIYAEAGRW 464

Query: 550 -NIVYSRTIFDGMSSKDIITWNSLICGYVLHGF-------------WHAALDLFDQMKSF 595
            ++   R +      K    W+S++   V++ F             +     L  +MK  
Sbjct: 465 EDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKLLQRMKLK 524

Query: 596 GLKPNRGTFL 605
           G  PN    L
Sbjct: 525 GYVPNTSVVL 534



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 179/361 (49%), Gaps = 14/361 (3%)

Query: 45  LDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKC 104
           ++ +  Q     +N  ++L   C     I +ARK+    + + + DV     +++   K 
Sbjct: 139 VEKLGLQSNMFLQNMIVHLYALC---GEIGVARKV---FDKMPQRDVITWNIMIARLVKM 192

Query: 105 GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKIL 164
           G  + A ++F +M ERN+ +W++MIG Y++  + +E ++LF  M   GL P++     +L
Sbjct: 193 GDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVL 252

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
            AC + G+   G+ +H    + G     RV N+++ +YVKCG L  A R F++M+E+  V
Sbjct: 253 VACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVV 312

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           +W++MI+G    G  ++A  LF+KM    +K   VTF  ++ + + +G  +   +    M
Sbjct: 313 SWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASM 372

Query: 285 -ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
               GI P +  + CM+  F++ G   +A +    M    + PNGV   + +  C   K 
Sbjct: 373 TRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMP---IAPNGVVWGALLGGCKVHKN 429

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY---SWNSM 400
           + +  E      K+   +D      L N+Y++    E   RV  +++D+ V     W+S+
Sbjct: 430 IKLAEEATRHLSKLDPLNDGYY-VVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSI 488

Query: 401 I 401
           +
Sbjct: 489 M 489



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 166/381 (43%), Gaps = 31/381 (8%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           G+  EAI +   +   G      T + +L AC D  ++ L R++H F N    E ++ V 
Sbjct: 224 GKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVC 283

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+ +Y KCGCL+DA  +F++M ER + +WSAMI   +   R  + + LF  M+  G+ 
Sbjct: 284 NTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVK 343

Query: 155 PDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRN--SVLAVYVKCGKLIWA 211
           P+   F  IL AC + G  E G K   S+    G+  V R+ +   ++ ++ + G L  A
Sbjct: 344 PNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGI--VPRIEHYGCMVDLFSRAGLLQEA 401

Query: 212 RRFFESMD-EKDGVAWNSMISG---YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
             F  +M    +GV W +++ G   +  I   +EA R   K+        VV  NI    
Sbjct: 402 HEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNI---- 457

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN--------GRTSQALD----L 315
           Y + G+ +    + K M   G+       + M+ G   N         +T +       L
Sbjct: 458 YAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTWEKL 517

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF--TDDVLVGNSLINMY 373
            + M   G +PN  T    +    D K   +      LAV  G   T    V   + N+ 
Sbjct: 518 LQRMKLKGYVPN--TSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNL- 574

Query: 374 SKCEELEAAERVFDMIKDKDV 394
             CE+  AA ++  ++  +++
Sbjct: 575 RVCEDCHAALKIISVVSTREI 595


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 227/765 (29%), Positives = 375/765 (49%), Gaps = 80/765 (10%)

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           K +H+ +IK  +S    +   ++ VY   G L  AR  F+     +    N+MI+G+ + 
Sbjct: 64  KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI------- 289
            ++ E  RLF  M   +I++   T    +++   L   +V ME+++     G        
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRGFHLHLYVG 183

Query: 290 ------------------------TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
                                     DV  W  +I G+ Q G   +++ +F EM   G+ 
Sbjct: 184 SSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGGLR 243

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P+ VT+ + + AC       +GM  HS  + +G  +DV V  SL++MYS   +  +A  V
Sbjct: 244 PSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALV 303

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES---------------------- 423
           FD +  + + SWN+MI+GY Q G   ++Y LF ++ +S                      
Sbjct: 304 FDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDL 363

Query: 424 -------------DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
                        ++  +++    ++  Y + G   +A  +F RMGK     +N  +W +
Sbjct: 364 ENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGK-----KNVITWTA 418

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           ++ G  Q G   +AL +F +MQ      N VT++S++  CA+L +  K + +H   +R  
Sbjct: 419 MLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHG 478

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDG-MSSKDIITWNSLICGYVLHGFWHAALDLF 589
                 + ++LID YAK G I  +  +F+     KD+I  NS+I GY +HG    AL ++
Sbjct: 479 YAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVY 538

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            +M    LKPN+ TF+S++ A S +G+V+ GK +F S+   + + P  +HY+ ++DL+ R
Sbjct: 539 SRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSR 598

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +G+LEEA E ++ MP +P + + EALL+ CR H N ++ +   +RL  L+  +  I  ++
Sbjct: 599 AGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYVML 658

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSE-SYSDLLYSW 768
             IYA   K E    +R L R    +   G   IEV N VYTF     S  S++D +Y  
Sbjct: 659 SNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWAD-IYQL 717

Query: 769 LQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
           L+N+   V A             + E  K ++   HSE+LA+AF L+ S+     I+I K
Sbjct: 718 LENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLL-STPCGSLIKITK 776

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+R+CV CH   KY+S +   EI + D+   HHF NG+CSC D+W
Sbjct: 777 NLRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 218/651 (33%), Positives = 331/651 (50%), Gaps = 79/651 (12%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++  W  M  G A +     AL L+  M  +G++PN  T    + +C   KA   G +I
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQI 125

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM---------------------- 388
           H   +K+G+  D+ V  SLI+MY +   LE A +VFD                       
Sbjct: 126 HGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYI 185

Query: 389 ---------IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN----------- 428
                    I  KDV SWN+MI+GY + G   +A ELF +M +++V P+           
Sbjct: 186 ASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC 245

Query: 429 -----------VITW-------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                      V +W             N LI  YI+ G  + A  LF+ +   D +   
Sbjct: 246 AQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVI--- 302

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             SWN+LI GY  +     AL +F++M  S   PN VT+LS+LPACA+L A    + IH 
Sbjct: 303 --SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHV 360

Query: 525 CVLRR--SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
            + +R   + ++     SLID YAK G+I  ++ +FD + ++ + +WN++I G+ +HG  
Sbjct: 361 YINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRA 420

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
           +AA D+F +M+   ++P+  TF+ ++ A S +GM+DLG+ +F S+ E Y+I P +EHY  
Sbjct: 421 NAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGC 480

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           MIDL G SG  +EA E I  M +EPD  IW +LL AC+++ N++L     + L  +EP +
Sbjct: 481 MIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKN 540

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGW----- 757
                L+  IYA  G+  +  K+R L  +   +   G   IE+ ++V+ F+ G       
Sbjct: 541 PGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 600

Query: 758 SESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
            E Y  L    +          +S     +EEE KE     HSEKLA+AF LI S++   
Sbjct: 601 REIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI-STKPGT 659

Query: 818 TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            + IVKN+R+C +CHE  K +S ++  EI   D    HHF++G CSC DYW
Sbjct: 660 KLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 214/472 (45%), Gaps = 75/472 (15%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           L  A  VFE ++E NL  W+ M   ++        + L+  M+  GL P+ + FP +L++
Sbjct: 53  LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKS 112

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C     F  G+ +H  V+KLG      V  S++++YV+ G+L  AR+ F+    +D V++
Sbjct: 113 CAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSY 172

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
            ++I+GY   G    A ++FD++  ++    VV++N +I  Y + G    A+E+ K M  
Sbjct: 173 TALITGYASKGYIASAQKMFDEIPIKD----VVSWNAMISGYAETGNNKEALELFKEMMK 228

Query: 287 LGITPDVFTWTCMIS---------------------GFAQN--------------GRTSQ 311
             + PD  T   ++S                     GF  N              G    
Sbjct: 229 TNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVET 288

Query: 312 ALDLFKEMSFVGVM-------------------------------PNGVTITSAISACTD 340
           A  LF+ +S+  V+                               PN VT+ S + AC  
Sbjct: 289 ACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAH 348

Query: 341 LKALAMGMEIHSLAVK--MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN 398
           L A+ +G  IH    K   G  +      SLI+MY+KC ++EAA++VFD I ++ + SWN
Sbjct: 349 LGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWN 408

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           +MI G+   G    A+++F +M+++++ P+ IT+  L+S    +G  D    +F+ M ++
Sbjct: 409 AMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKED 468

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            K+      +  +I      G    A  +   M+     P+ V   S+L AC
Sbjct: 469 YKITPKLEHYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIWCSLLKAC 517



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 162/316 (51%), Gaps = 7/316 (2%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           G   EA+ +   +     +   +T ++++ AC  S SI L R++H+++ +     ++ + 
Sbjct: 214 GNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIV 273

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+ +Y KCG ++ A  +FE +  +++ +W+ +IG Y+    ++E + LF  M++ G  
Sbjct: 274 NALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 333

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKL--GMSCVRRVRNSVLAVYVKCGKLIWAR 212
           P+D     IL AC + G  E G+ +H  + K   G++     R S++ +Y KCG +  A+
Sbjct: 334 PNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQ 393

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + F+S+  +   +WN+MI G+   G  + A  +F +M + EI+   +TF  L+ + +  G
Sbjct: 394 QVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSG 453

Query: 273 QCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
             D+   + + M E   ITP +  + CMI     +G   +A ++   M    + P+GV  
Sbjct: 454 MLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTME---MEPDGVIW 510

Query: 332 TSAISACTDLKALAMG 347
            S + AC     + +G
Sbjct: 511 CSLLKACKMYANVELG 526



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 158/357 (44%), Gaps = 65/357 (18%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  LL++C  S +    +++H   L L  ++D++V T L+S+Y + G L+DAR+VF+  
Sbjct: 105 TFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQS 164

Query: 118 RERNL--YT-----------------------------WSAMIGAYSRDQRWREVVELFF 146
             R++  YT                             W+AMI  Y+     +E +ELF 
Sbjct: 165 SHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFK 224

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M++  + PD+     ++ AC      E G+ +HS +   G     ++ N+++ +Y+KCG
Sbjct: 225 EMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 284

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           ++  A   FE +  KD ++WN++I GY  +    EA  LF +M R       VT   ++ 
Sbjct: 285 EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILP 344

Query: 267 SYNQLGQCDVA------------------------MEMVKRMESLGITPDVF-------- 294
           +   LG  ++                         ++M  +   +     VF        
Sbjct: 345 ACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSL 404

Query: 295 -TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
            +W  MI GFA +GR + A D+F  M    + P+ +T    +SAC+    L +G  I
Sbjct: 405 SSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHI 461


>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
 gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
          Length = 857

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 222/692 (32%), Positives = 342/692 (49%), Gaps = 76/692 (10%)

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
           R+ N++L++ V+ G++  A R F  M E+D  +WN M+ GY ++G  +EA  L+ +M   
Sbjct: 132 RLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWA 191

Query: 253 EIKLGVVTFNILIRS--------------------------------YNQLGQCDVAMEM 280
            ++  V TF  ++R+                                     +C   +  
Sbjct: 192 GMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAA 251

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
            K  + + +T D  +W  MI+G  +N      L+LF  M    V PN +TITS   A   
Sbjct: 252 RKVFDGMAVT-DCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGM 310

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
           L  +    E+H  AVK GF  DV   NSLI MY+    +  A ++F  ++ KD  SW +M
Sbjct: 311 LSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAM 370

Query: 401 IAGYCQAGYCGKAYELFIKMQESDVPPN-------------------------------- 428
           I+GY + G+  KA E++  M+  +V P+                                
Sbjct: 371 ISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGF 430

Query: 429 ---VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL 485
              V+  N L+  Y ++ + D+A+++F+ M + D V     SW+S+IAG+    +   AL
Sbjct: 431 IRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVV-----SWSSMIAGFCFNHRSFEAL 485

Query: 486 GVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
             FR M      PN VT ++ L ACA   A    KEIH  VLR  + S   V N+L+D Y
Sbjct: 486 YYFRYMLGHV-KPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLY 544

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
            K G   Y+   F   S KD+++WN ++ G+V HG    AL LF+QM   G  P+  TF+
Sbjct: 545 VKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTFV 604

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
           +++ A S AGMV  G ++F  +TE + I+P ++HY+ M+DL  R GKL EA   I  MPI
Sbjct: 605 ALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPI 664

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
           +PD+++W ALL  CRIH +++L  LA + + +LEP DV    L+  +Y   GK     +V
Sbjct: 665 KPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDAGKWAQVARV 724

Query: 726 RKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGL 785
           RK  RE       G  W+EVK + + F+T   S      +   L  + E + A       
Sbjct: 725 RKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERMKACGFAPVE 784

Query: 786 CIEEEE--KEEISGIHSEKLALAFALIGSSQA 815
            +E++E  +++I   HSE+LA+AF LI ++  
Sbjct: 785 SLEDKEVSEDDILCGHSERLAVAFGLINTTPG 816



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 167/625 (26%), Positives = 303/625 (48%), Gaps = 80/625 (12%)

Query: 25  RDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN 84
           R   L  LC +G+L +A+ +L+S            Y+ L + C    ++    +  A  +
Sbjct: 67  RSAALRALCSHGQLAQALWLLES---SPEPPDEGAYVALFRLCEWRRAVDAGMRACARAD 123

Query: 85  LV-TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
                  + +   +LS+  + G +  A  VF  M ER++++W+ M+G Y +     E ++
Sbjct: 124 AEHPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALD 183

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           L++ M+  G+ PD + FP +L+ CG   D+  G+ +H+ V++ G      V N+++ +Y 
Sbjct: 184 LYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYA 243

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-- 261
           KCG ++ AR+ F+ M   D ++WN+MI+G+F+  E +    LF  M   E++  ++T   
Sbjct: 244 KCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITS 303

Query: 262 ---------------------------------NILIRSYNQLGQCDVAMEMVKRMESLG 288
                                            N LI+ Y  LG+   A ++  RME   
Sbjct: 304 VTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRME--- 360

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
            T D  +WT MISG+ +NG   +AL+++  M    V P+ VTI SA++AC  L  L +G+
Sbjct: 361 -TKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTIASALAACACLGRLDVGI 419

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           ++H LA   GF   V+V N+L+ MY+K + ++ A  VF  + +KDV SW+SMIAG+C   
Sbjct: 420 KLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFC--- 476

Query: 409 YCGKAYE--LFIKMQESDVPPNVITWNVLIS-----GYIQNGNEDEA------------- 448
           +  +++E   + +     V PN +T+   +S     G +++G E  A             
Sbjct: 477 FNHRSFEALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYV 536

Query: 449 ----VDLFQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
               +DL+ + G+            +++  SWN +++G+   G  + AL +F +M     
Sbjct: 537 PNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGE 596

Query: 497 YPNCVTILSVLPACAYLVASNKVKEI-HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
           +P+ VT +++L AC+      +  E+ H    + S+  +L     ++D  ++ G +  + 
Sbjct: 597 HPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEAY 656

Query: 556 TIFDGMSSK-DIITWNSLICGYVLH 579
            + + M  K D   W +L+ G  +H
Sbjct: 657 NLINRMPIKPDAAVWGALLNGCRIH 681


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 205/618 (33%), Positives = 326/618 (52%), Gaps = 47/618 (7%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P VF W  +I G++ +     A++++  M   GV P+G T+   + AC+ +  L +G  +
Sbjct: 132 PSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRV 191

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H    ++GF  DV V N L+ +Y+KC  +E A  VF+ + D+++ SW SMI+GY Q G  
Sbjct: 192 HGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLP 251

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGY----------------IQNGNEDEA---VDL 451
            +A  +F +M++ +V P+ I    ++  Y                ++ G E E    + L
Sbjct: 252 MEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISL 311

Query: 452 FQRMGKNDKVK-----------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
                K  +V             N   WN++I+GY + G  N A+G+F++M S     + 
Sbjct: 312 TAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDS 371

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           +T+ S + ACA + + +  K +   + +    + + V  +LID +AK G++  +R +FD 
Sbjct: 372 ITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDR 431

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
              KD++ W+++I GY LHG    A+DLF  MK  G+ PN  TF+ ++ A + +G+V+ G
Sbjct: 432 TLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEG 491

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
            ++F S+ + Y I    +HY+ ++DL GRSG L EA +FI  MPIEP  S+W ALL AC+
Sbjct: 492 WELFHSM-KYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACK 550

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           I+ ++ L   A E+LF L+P +      +  +YA     +   KVR L RE       G 
Sbjct: 551 IYRHVTLGEYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGY 610

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEE 791
             IE+   +  F  G  S      ++  L    E++  R   +G           + +EE
Sbjct: 611 SLIEINGKLQAFRVGDKSHPRFKEIFEEL----ESLERRLKEAGFIPHIESVLHDLNQEE 666

Query: 792 KEEISGIHSEKLALAFALIGSSQAP-HTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLAD 850
           KEE    HSE+LA+A+ LI  S AP  T+RI KN+R C++CH   K +S + + EI + D
Sbjct: 667 KEETLCNHSERLAIAYGLI--STAPGTTLRITKNLRACINCHSATKLISKLVNREIVVRD 724

Query: 851 SKCLHHFKNGQCSCGDYW 868
           +   HHFKNG CSC DYW
Sbjct: 725 ANRFHHFKNGVCSCRDYW 742



 Score =  216 bits (550), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 206/399 (51%), Gaps = 39/399 (9%)

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           F+ TK ++     G +  AR+VF++  E +++ W+A+I  YS    + + +E++  M   
Sbjct: 104 FLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQAS 163

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+ PD F  P +L+AC      E GK +H  + +LG      V+N ++A+Y KCG++  A
Sbjct: 164 GVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQA 223

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R  FE +D+++ V+W SMISGY Q G   EA R+F +M +  +K   +    ++R+Y  +
Sbjct: 224 RIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDV 283

Query: 272 -----------------------------------GQCDVAMEMVKRMESLGITPDVFTW 296
                                              GQ  VA     +ME     P+V  W
Sbjct: 284 EDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQME----IPNVMMW 339

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             MISG+A+NG T++A+ LF+EM    +  + +T+ SAI AC  + +L +   +     K
Sbjct: 340 NAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINK 399

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
             + +DV V  +LI+M++KC  ++ A  VFD   DKDV  W++MI GY   G    A +L
Sbjct: 400 TEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDL 459

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           F  M+++ V PN +T+  L++    +G  +E  +LF  M
Sbjct: 460 FYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM 498



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 174/349 (49%), Gaps = 33/349 (9%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTK 96
             +AI +   +   G      T   +L+AC     + + +++H     L  E DVFV+  
Sbjct: 150 FGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNG 209

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+++YAKCG ++ AR VFE + +RN+ +W++MI  Y ++    E + +F  M Q  + PD
Sbjct: 210 LVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPD 269

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
                 +L+A  +  D E GK +H  V+K+G+     +  S+ A+Y KCG+++ AR FF+
Sbjct: 270 WIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFD 329

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            M+  + + WN+MISGY + G  +EA  LF +M  + I+   +T    I +  Q+G  D+
Sbjct: 330 QMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDL 389

Query: 277 A----------------------MEMVKRMESLGITPDVF---------TWTCMISGFAQ 305
           A                      ++M  +  S+ +  +VF          W+ MI G+  
Sbjct: 390 AKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGL 449

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HSL 353
           +GR   A+DLF  M   GV PN VT    ++AC     +  G E+ HS+
Sbjct: 450 HGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM 498



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 197/417 (47%), Gaps = 56/417 (13%)

Query: 315 LFKEMSFVGVMP-----------NGVTITSAISACTDLKALAMGM-EIHSLAVKMGFTDD 362
           LFK ++F   +P           +G    S  S+  D       + +IH+  V  G  + 
Sbjct: 43  LFKFLNFYSSLPLPLDHSDYIPYSGFDFDSFFSSLLDHSVHKRHLNQIHAQLVVSGLVES 102

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
             +    +N      E+  A +VFD   +  V+ WN++I GY    + G A E++ +MQ 
Sbjct: 103 GFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQA 162

Query: 423 SDVPPNVITWNVLISG--------------------------YIQNGNEDEAVDLFQRMG 456
           S V P+  T   ++                            ++QNG     V L+ + G
Sbjct: 163 SGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNG----LVALYAKCG 218

Query: 457 KNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
           + ++ +        RN  SW S+I+GY Q G    AL +F +M+     P+ + ++SVL 
Sbjct: 219 RVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLR 278

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT 568
           A   +    + K IHGCV++  LE    ++ SL   YAK G ++ +R+ FD M   +++ 
Sbjct: 279 AYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMM 338

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV--FCS 626
           WN++I GY  +G+ + A+ LF +M S  ++ +  T  S ILA +  G +DL K +  + +
Sbjct: 339 WNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYIN 398

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
            TE Y+    +   +A+ID++ + G ++ A E + D  ++ D  +W A++    +HG
Sbjct: 399 KTE-YRNDVFVN--TALIDMFAKCGSVDLARE-VFDRTLDKDVVVWSAMIVGYGLHG 451



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 201/467 (43%), Gaps = 69/467 (14%)

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G++ +AR+ F+   E     WN++I GY       +A  ++ +M    +     T   ++
Sbjct: 117 GEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVL 176

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVF------------------------------- 294
           ++ + +   +V   +  ++  LG   DVF                               
Sbjct: 177 KACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIV 236

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +WT MISG+ QNG   +AL +F +M    V P+ + + S + A TD++ L  G  IH   
Sbjct: 237 SWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCV 296

Query: 355 VKMG--FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
           VKMG  F  D+L+  SL  MY+KC ++  A   FD ++  +V  WN+MI+GY + GY  +
Sbjct: 297 VKMGLEFEPDLLI--SLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNE 354

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA----------------------VD 450
           A  LF +M   ++  + IT    I    Q G+ D A                      +D
Sbjct: 355 AVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALID 414

Query: 451 LFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           +F + G  D  +        ++   W+++I GY   G+  +A+ +F  M+ +   PN VT
Sbjct: 415 MFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVT 474

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
            + +L AC +     +  E+   +    +E+       ++D   +SG++  +      M 
Sbjct: 475 FVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMP 534

Query: 563 -SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSI 607
               +  W +L+    +  + H  L  +   + F L P N G ++ +
Sbjct: 535 IEPGVSVWGALLGACKI--YRHVTLGEYAAEQLFSLDPFNTGHYVQL 579



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 162/364 (44%), Gaps = 15/364 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG   EA+ +   +  +  K      +++L+A  D   +   + +H   + +  E +  +
Sbjct: 248 NGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDL 307

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L ++YAKCG +  AR  F+ M   N+  W+AMI  Y+++    E V LF  M+   +
Sbjct: 308 LISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNI 367

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             D       + AC   G  +  K M   + K        V  +++ ++ KCG +  AR 
Sbjct: 368 RTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLARE 427

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+   +KD V W++MI GY   G   +A  LF  M +  +    VTF  L+ + N  G 
Sbjct: 428 VFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGL 487

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP--NGVTI 331
            +   E+   M+  GI      + C++    ++G  ++A D      F+  MP   GV++
Sbjct: 488 VEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYD------FITTMPIEPGVSV 541

Query: 332 TSA-ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN--SLINMYSKCEELEAAERVFDM 388
             A + AC   + + +G      A ++   D    G+   L N+Y+     ++  +V  +
Sbjct: 542 WGALLGACKIYRHVTLG---EYAAEQLFSLDPFNTGHYVQLSNLYASSRLWDSVAKVRIL 598

Query: 389 IKDK 392
           +++K
Sbjct: 599 MREK 602



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 109/245 (44%), Gaps = 46/245 (18%)

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
           V    + +IH  ++   L  S  ++   ++     G I Y+R +FD      +  WN++I
Sbjct: 82  VHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAII 141

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF--------- 624
            GY  H F+  A++++ +M++ G+ P+  T   ++ A S   ++++GK+V          
Sbjct: 142 RGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFE 201

Query: 625 ---------------CSITECYQII------PMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
                          C   E  +I+        I  +++MI  YG++G   EA+     M
Sbjct: 202 SDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQM 261

Query: 664 ---PIEPDSSIWEALLTACRIHGNID-------LAVLAIERLFDLEPGDVLIQRLILQIY 713
               ++PD   W AL++  R + +++       +    ++   + EP D+LI   +  +Y
Sbjct: 262 RQRNVKPD---WIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEP-DLLIS--LTAMY 315

Query: 714 AICGK 718
           A CG+
Sbjct: 316 AKCGQ 320


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  342 bits (878), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 210/647 (32%), Positives = 329/647 (50%), Gaps = 49/647 (7%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N L+  Y++ G+ D A+++   M       ++ +WT MISG +QN + S+A+  F  M  
Sbjct: 44  NHLVNMYSKCGELDHALKLFDTMPQ----RNLVSWTAMISGLSQNSKFSEAIRTFCGMRI 99

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
            G +P     +SAI AC  L ++ MG ++H LA+K G   ++ VG++L +MYSKC  +  
Sbjct: 100 CGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFD 159

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP--------------- 426
           A +VF+ +  KD  SW +MI GY + G   +A   F KM + +V                
Sbjct: 160 ACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGA 219

Query: 427 --------------------PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                ++   N L   Y + G+ + A ++F      D   RN  
Sbjct: 220 LKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGI----DSECRNVV 275

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           S+  LI GY +  Q    L VF +++     PN  T  S++ ACA   A  +  ++H  V
Sbjct: 276 SYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQV 335

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           ++ + +    V + L+D Y K G + ++   FD +     I WNSL+  +  HG    A+
Sbjct: 336 MKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAI 395

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
             F++M   G+KPN  TF+S++   S AG+V+ G   F S+ + Y ++P  EHYS +IDL
Sbjct: 396 KFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDL 455

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GR+G+L+EA EFI  MP EP++  W + L ACRIHG+ ++  LA E+L  LEP +    
Sbjct: 456 LGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGAL 515

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
            L+  IYA   + ED   VR   R+   +   G  W++V    + F    WS      +Y
Sbjct: 516 VLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWVDVGYKTHVFGAEDWSHXRKSAIY 575

Query: 767 SWLQNVPENVTA-----RSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRI 821
             L  + + + A      +    L +++  KE++   HSE++A+AFALI S      I +
Sbjct: 576 EKLDXLLDQIKAAGYVPXTDSVPLDMDDXMKEKLLHRHSERIAVAFALI-SMPIGKPIIV 634

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            KN+R+CV CH   K++S +   +I + D+   HHF +G CSCGDYW
Sbjct: 635 KKNLRVCVDCHSAIKFISKVTGRKIIVRDNSRFHHFTDGSCSCGDYW 681



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 230/486 (47%), Gaps = 36/486 (7%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFVKTKLLSVYAKCGCLDDAREVFED 116
           N   +++Q    +  +   ++LHA L         F+   L+++Y+KCG LD A ++F+ 
Sbjct: 6   NALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDT 65

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M +RNL +W+AMI   S++ ++ E +  F  M   G  P  F F   ++AC + G  E G
Sbjct: 66  MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 125

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           K MH L +K G+     V +++  +Y KCG +  A + FE M  KD V+W +MI GY +I
Sbjct: 126 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 185

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF-- 294
           GE +EA   F KM  EE+ +        + +   L  C     +   +  LG   D+F  
Sbjct: 186 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 245

Query: 295 ------------------------------TWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
                                         ++TC+I G+ +  +  + L +F E+   G+
Sbjct: 246 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 305

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            PN  T +S I AC +  AL  G ++H+  +K+ F +D  V + L++MY KC  LE A +
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQ 365

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
            FD I D    +WNS+++ + Q G    A + F +M +  V PN IT+  L++G    G 
Sbjct: 366 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGL 425

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            +E +D F  M K   V      ++ +I    + G+   A     +M    F PN     
Sbjct: 426 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMP---FEPNAFGWC 482

Query: 505 SVLPAC 510
           S L AC
Sbjct: 483 SFLGAC 488



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 123/532 (23%), Positives = 230/532 (43%), Gaps = 59/532 (11%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  N + +EAI     +   G    +  + + ++AC    SI + +++H   L      +
Sbjct: 81  LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 140

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +FV + L  +Y+KCG + DA +VFE+M  ++  +W+AMI  YS+   + E +  F  M+ 
Sbjct: 141 LFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMID 200

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + +  D  +    L ACG     + G+ +HS V+KLG      V N++  +Y K G +  
Sbjct: 201 EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMES 260

Query: 211 ARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-- 267
           A   F    E ++ V++  +I GY +  + ++   +F ++ R+ I+    TF+ LI++  
Sbjct: 261 ASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACA 320

Query: 268 ------------------------------YNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                          +  G+C +    ++  + +G  P    W 
Sbjct: 321 NQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEIG-DPTEIAWN 379

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVK 356
            ++S F Q+G    A+  F+ M   GV PN +T  S ++ C+    +  G++  +S+   
Sbjct: 380 SLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKT 439

Query: 357 MGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQA---GYCGK 412
            G        + +I++  +   L EA E +  M  + + + W S + G C+       GK
Sbjct: 440 YGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL-GACRIHGDKEMGK 498

Query: 413 -AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
            A E  +K++    P N     VL+S    N  + E V   +   ++  VK+        
Sbjct: 499 LAAEKLVKLE----PKNSGAL-VLLSNIYANERQWEDVRSVRMRMRDGNVKK-------- 545

Query: 472 IAGYQ--QLGQKNNALGV--FRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
           + GY    +G K +  G   +   + S  Y     +L  + A  Y+  ++ V
Sbjct: 546 LPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSV 597



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 104/211 (49%), Gaps = 8/211 (3%)

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
           K++H  ++         + N L++ Y+K G + ++  +FD M  +++++W ++I G   +
Sbjct: 25  KQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLSQN 84

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
             +  A+  F  M+  G  P +  F S I A +  G +++GK++ C   + + I   +  
Sbjct: 85  SKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALK-FGIGSELFV 143

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
            S + D+Y + G + +A +  E+MP + + S W A++      G  + A+LA +++ D E
Sbjct: 144 GSNLEDMYSKCGAMFDACKVFEEMPCKDEVS-WTAMIDGYSKIGEFEEALLAFKKMIDEE 202

Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLER 730
               + Q ++      CG    ALK  K  R
Sbjct: 203 V--TIDQHVLCSTLGACG----ALKACKFGR 227


>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
          Length = 665

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 203/582 (34%), Positives = 317/582 (54%), Gaps = 14/582 (2%)

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVG--VMPNGVTITSAISACTDLKALAMGMEIHSL 353
           +  +I     +     AL LF  M   G    P+  T   A+ +C+  K L +G++IHS 
Sbjct: 89  FNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKDLLLGLQIHSA 148

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
             K+    +V V +S I+MYS+C   E A RVFD +  +DV SWN+MIAG+ + G   +A
Sbjct: 149 VAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRA 208

Query: 414 YELFIK--MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
            E+F +  + +  +P       +L +  + N   D+ +   +R+  N + K    SWN++
Sbjct: 209 IEVFKQFVVLQGSMPDAGTMAGILPA--MGNAKPDD-IRFVRRVFDNMQFK-ELISWNAM 264

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           +A Y        A+ +F  M+     P+ +T+ +VLP C  L A +  K IH  + R+++
Sbjct: 265 LAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNM 324

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
             +L + N+L+D YA  G +  +R IFD MS++D+I+W S+I  Y  HG    A+DLF++
Sbjct: 325 CPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEK 384

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           M   GL+P+   F++++ A S AG++  GK  F S+T  Y IIP  EHY+ M+DL GR+G
Sbjct: 385 MLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAG 444

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
            + EA +FI  M IEP+  +W ALL ACRIH N+D+ ++A + LF L P       L+  
Sbjct: 445 CINEAYDFITTMLIEPNERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSN 504

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN 771
           +YA  G+  D   VR +      +   G   +E+ + V+TF  G      S+++Y  L  
Sbjct: 505 MYARAGRWADVTSVRSVMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDE 564

Query: 772 VPENVTARSSHSGL-----CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIR 826
           +   +     +  +      +EEE+KE+   +HSEKLA+AF L+ +S     IR+  N+R
Sbjct: 565 LLGKIRGMGYNPEVEATLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGT-IIRVTMNLR 623

Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            C  CH  AK +S++   EI L D+  +HH   G CSCGDYW
Sbjct: 624 TCSDCHLAAKLISIITCREIVLKDTNRIHHIVQGVCSCGDYW 665



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 192/397 (48%), Gaps = 14/397 (3%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEID----VFVKTKLLSVYAKCGCLDDAREVF 114
           + + LL AC     +   R  HA L ++             KL+  YA C  L  A  V 
Sbjct: 14  SLLRLLAACRAPAHLPSLRAAHARLLVLLHPSHPSAAHANVKLIQAYAACSALPLAHTVL 73

Query: 115 E----DMRERNLYT-WSAMIGAYSRDQRWREVVELFFLMVQDG--LFPDDFLFPKILQAC 167
           E    D R R     ++ +I A +     R+ + LF  M   G   FPD + +P  L++C
Sbjct: 74  ESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSC 133

Query: 168 GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
               D   G  +HS V KL +     V +S +++Y +CG+   A R F+ M  +D V+WN
Sbjct: 134 SASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGMPHRDVVSWN 193

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLG-VVTFNILIRSYNQLGQCDVAMEMVKRMES 286
           +MI+G+ ++G  D A  +F +    +  +    T   ++ +       D+    V+R+  
Sbjct: 194 AMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDI--RFVRRVFD 251

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
                ++ +W  M++ +A N    +A++LF  M    V P+ +T+ + +  C +L A ++
Sbjct: 252 NMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSV 311

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G  IH +  +     ++L+ N+L++MY+ C  L+ A  +FD++  +DV SW S+I+ Y +
Sbjct: 312 GKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGK 371

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
            G+  +A +LF KM    + P+ I +  +++     G
Sbjct: 372 HGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAG 408



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 4/229 (1%)

Query: 111 REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
           R VF++M+ + L +W+AM+  Y+ ++   + VELF LM +D + PD      +L  CG  
Sbjct: 247 RRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGEL 306

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
             F  GK +H ++ +  M     + N+++ +Y  CG L  AR  F+ M  +D ++W S+I
Sbjct: 307 SAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSII 366

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGI 289
           S Y + G   EA  LF+KM  + ++   + F  ++ + +  G           M S   I
Sbjct: 367 SAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTSRYHI 426

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
            P    +TCM+    + G  ++A D    M    + PN     + + AC
Sbjct: 427 IPKAEHYTCMVDLLGRAGCINEAYDFITTML---IEPNERVWGALLQAC 472



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 143/323 (44%), Gaps = 68/323 (21%)

Query: 59  TYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           TY   L++C  S  + L  ++H A   L  + +V+V    +S+Y++CG  +DA  VF+ M
Sbjct: 125 TYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGM 184

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELF--FLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
             R++ +W+AMI  ++R   +   +E+F  F+++Q G  PD      IL A GN      
Sbjct: 185 PHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQ-GSMPDAGTMAGILPAMGN------ 237

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
                                       K   + + RR F++M  K+ ++WN+M++ Y  
Sbjct: 238 ---------------------------AKPDDIRFVRRVFDNMQFKELISWNAMLAVYAN 270

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM---EMVKRME------- 285
              + +A  LF  M ++E++   +T   ++    +L    V     E++KR         
Sbjct: 271 NEFHVKAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLL 330

Query: 286 ---------------------SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
                                 L    DV +WT +IS + ++G   +A+DLF++M   G+
Sbjct: 331 ENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGL 390

Query: 325 MPNGVTITSAISACTDLKALAMG 347
            P+ +   + ++AC+    LA G
Sbjct: 391 EPDSIAFVAVLAACSHAGLLADG 413



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 5/122 (4%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           T   +L  C + ++  + +++H  +   N+    ++ ++  L+ +YA CGCL DARE+F+
Sbjct: 295 TLATVLPPCGELSAFSVGKRIHEIIKRKNMCP--NLLLENALMDMYASCGCLKDAREIFD 352

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            M  R++ +W+++I AY +    RE V+LF  M+  GL PD   F  +L AC + G    
Sbjct: 353 LMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLAD 412

Query: 176 GK 177
           GK
Sbjct: 413 GK 414


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 209/626 (33%), Positives = 330/626 (52%), Gaps = 55/626 (8%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           DVF+W  +I+  A++G +++AL  F  M  + + P   +   AI AC+ L  +  G + H
Sbjct: 40  DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
             A   G+  D+ V ++LI MYS C +LE A +VFD I  +++ SW SMI GY   G   
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159

Query: 412 KAYELF--IKMQESD---------------------VPPNVIT----------------- 431
            A  LF  + + E+D                     VP   +T                 
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219

Query: 432 -WNVLISGYIQNGNEDEAV--DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
             N L+  Y + G    AV   +F ++   D+V     S+NS+++ Y Q G  N A  VF
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRV-----SYNSIMSVYAQSGMSNEAFEVF 274

Query: 489 RKM-QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           R++ ++     N +T+ +VL A ++  A    K IH  V+R  LE  + V  S+ID Y K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G +  +R  FD M +K++ +W ++I GY +HG    AL+LF  M   G++PN  TF+S+
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           + A S AG+   G + F ++   + + P +EHY  M+DL GR+G L++A + I+ M ++P
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           DS IW +LL ACRIH N++LA +++ RLF+L+  +     L+  IYA  G+ +D  +VR 
Sbjct: 455 DSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRM 514

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTAR---SSHSG 784
           + +        G   +E+   V+ F+ G       + +Y +L  +   +      S+ S 
Sbjct: 515 IMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSS 574

Query: 785 LC--IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMH 842
           +C  ++EEEKE    +HSEKLA+AF ++ +     T+ +VKN+R+C  CH   K +S + 
Sbjct: 575 VCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGS-TVNVVKNLRVCSDCHNVIKLISKIV 633

Query: 843 HCEIFLADSKCLHHFKNGQCSCGDYW 868
             E  + D+K  HHFK+G CSCGDYW
Sbjct: 634 DREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 209/471 (44%), Gaps = 78/471 (16%)

Query: 82  FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           F   V + DVF    +++  A+ G   +A   F  MR+ +LY                  
Sbjct: 32  FNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLY------------------ 73

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
                        P    FP  ++AC +  D  +GK  H      G      V ++++ +
Sbjct: 74  -------------PTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVM 120

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGY---------------FQIGENDEAHRLF 246
           Y  CGKL  AR+ F+ + +++ V+W SMI GY                 + END+   +F
Sbjct: 121 YSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMF 180

Query: 247 -DKM-------------------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEM 280
            D M                          +     GV   N L+ +Y + G+  VA  +
Sbjct: 181 LDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVA--V 238

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP-NGVTITSAISACT 339
            +++    +  D  ++  ++S +AQ+G +++A ++F+ +    V+  N +T+++ + A +
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVS 298

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
              AL +G  IH   ++MG  DDV+VG S+I+MY KC  +E A + FD +K+K+V SW +
Sbjct: 299 HSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTA 358

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           MIAGY   G+  KA ELF  M +S V PN IT+  +++     G   E    F  M    
Sbjct: 359 MIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRF 418

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            V+     +  ++    + G    A  + ++M+     P+ +   S+L AC
Sbjct: 419 GVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK---MKPDSIIWSSLLAAC 466



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 196/424 (46%), Gaps = 61/424 (14%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH--AFLNLVTEI 89
           L  +G   EA+    S+        R+++   ++AC     I   ++ H  AF+    + 
Sbjct: 51  LARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV-FGYQS 109

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D+FV + L+ +Y+ CG L+DAR+VF+++ +RN+ +W++MI  Y  +    + V LF  ++
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169

Query: 150 ------QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
                  D +F D      ++ AC         + +HS VIK G      V N++L  Y 
Sbjct: 170 VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229

Query: 204 KCGK--LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           K G+  +  AR+ F+ + +KD V++NS++S Y Q G ++EA  +F    R  +K  VVTF
Sbjct: 230 KGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF----RRLVKNKVVTF 285

Query: 262 NILIRS----------------------------------------YNQLGQCDVAMEMV 281
           N +  S                                        Y + G+ + A +  
Sbjct: 286 NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAF 345

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
            RM++     +V +WT MI+G+  +G  ++AL+LF  M   GV PN +T  S ++AC+  
Sbjct: 346 DRMKN----KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHA 401

Query: 342 KALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNS 399
                G    +++  + G    +     ++++  +   L+ A  +   +K K D   W+S
Sbjct: 402 GLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSS 461

Query: 400 MIAG 403
           ++A 
Sbjct: 462 LLAA 465


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  342 bits (877), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 242/856 (28%), Positives = 421/856 (49%), Gaps = 54/856 (6%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           R T   +L+ C+ S  +  +   H +   +  + D FV   L+++Y K G + + + +FE
Sbjct: 145 RMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFE 204

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
           +M  R++  W+ M+ AY       E ++L       GL P++     + +  G+  D +A
Sbjct: 205 EMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGD--DSDA 262

Query: 176 GKLMHSLVIKLGMSCVRRV--RNSVLAVYVKCGKLIWARRFFESMDEKD----GVAWNSM 229
           G++  S       S V  +  RN  L+ Y+  G+     + F  M E D     V +  M
Sbjct: 263 GQV-KSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILM 321

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           ++   ++       ++     +  + L +   N LI  Y +L +   A  +   M     
Sbjct: 322 LATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE--- 378

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL-KALAMGM 348
             D+ +W  +I+G AQNG   +A+ LF ++   G+ P+  T+TS + A + L + L++  
Sbjct: 379 -RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSK 437

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           ++H  A+K+    D  V  +LI+ YS+   ++ AE +F+   + D+ +WN+M+AGY Q+ 
Sbjct: 438 QVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSH 496

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLIS--GYIQNGNEDEAV----------------- 449
              K  +LF  M +     +  T   +    G++   N+ + V                 
Sbjct: 497 DGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 556

Query: 450 ---DLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
              D++ + G     +         +  +W ++I+G  + G++  A  VF +M+     P
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLP 616

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           +  TI ++  A + L A  + ++IH   L+ +  +   V  SL+D YAK G+I  +  +F
Sbjct: 617 DEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLF 676

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
             +   +I  WN+++ G   HG     L LF QMKS G+KP++ TF+ ++ A S +G+V 
Sbjct: 677 KRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVS 736

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
              K   S+   Y I P IEHYS + D  GR+G +++A   IE M +E  +S++  LL A
Sbjct: 737 EAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAA 796

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
           CR+ G+ +       +L +LEP D     L+  +YA   K ++    R + + +  +   
Sbjct: 797 CRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDP 856

Query: 739 GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKE 793
           G  WIEVKN ++ FV    S   ++L+Y  ++++      E     +  + + +EEEEKE
Sbjct: 857 GFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKE 916

Query: 794 EISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
                HSEKLA+AF L+  S  P T IR++KN+R+C  CH   KY++ +++ EI L D+ 
Sbjct: 917 RALYYHSEKLAVAFGLL--STPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDAN 974

Query: 853 CLHHFKNGQCSCGDYW 868
             H FK+G CSCGDYW
Sbjct: 975 RFHRFKDGICSCGDYW 990



 Score =  226 bits (575), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 166/671 (24%), Positives = 306/671 (45%), Gaps = 61/671 (9%)

Query: 60  YINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           +   L+  I S+ + L +  HA  L      + F+   L+S+Y+KCG L  AR VF+ M 
Sbjct: 42  WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101

Query: 119 ERNLYTWSAMIGAYSRD-----QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF 173
           +R+L +W++++ AY++      +  ++   LF ++ QD ++        +L+ C + G  
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161

Query: 174 EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
            A +  H    K+G+     V  +++ +Y+K GK+   +  FE M  +D V WN M+  Y
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
            ++G  +EA  L        +    +T  +L R                  ++  ++  +
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEII 281

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
           F     +S +  +G+ S  L  F +M    V  + VT    ++    + +LA+G ++H +
Sbjct: 282 FR-NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM 340

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
           A+K+G    + V NSLINMY K  +   A  VFD + ++D+ SWNS+IAG  Q G   +A
Sbjct: 341 ALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEA 400

Query: 414 YELFIKMQESDVPPNVITW------------------------------------NVLIS 437
             LF+++    + P+  T                                       LI 
Sbjct: 401 VCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALID 460

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
            Y +N    EA  LF+R         +  +WN+++AGY Q    +  L +F  M      
Sbjct: 461 AYSRNRCMKEAEILFERHN------FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
            +  T+ +V   C +L A N+ K++H   ++   +  L V + ++D Y K G++  ++  
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 574

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           FD +   D + W ++I G + +G    A  +F QM+  G+ P+  T  ++  A S    +
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 634

Query: 618 DLGKKVFCSITE--CYQIIPMIEHYSAMIDLYGRSGKLEEA---MEFIEDMPIEPDSSIW 672
           + G+++  +  +  C    P +   ++++D+Y + G +++A    + IE M I    + W
Sbjct: 635 EQGRQIHANALKLNCTN-DPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMMNI----TAW 687

Query: 673 EALLTACRIHG 683
            A+L     HG
Sbjct: 688 NAMLVGLAQHG 698



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 123/505 (24%), Positives = 231/505 (45%), Gaps = 42/505 (8%)

Query: 24  FRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF- 82
           FR+  L     +G+ +  +     +     +  + T+I +L   +  +S+ L +++H   
Sbjct: 282 FRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMA 341

Query: 83  LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
           L L  ++ + V   L+++Y K      AR VF++M ER+L +W+++I   +++    E V
Sbjct: 342 LKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAV 401

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGD-FEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
            LF  +++ GL PD +    +L+A  +  +     K +H   IK+       V  +++  
Sbjct: 402 CLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDA 461

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           Y +   +  A   FE  +  D VAWN+M++GY Q  +  +  +LF  M ++  +    T 
Sbjct: 462 YSRNRCMKEAEILFERHN-FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL 520

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGI-------------------------------- 289
             + ++   L     A+   K++ +  I                                
Sbjct: 521 ATVFKTCGFL----FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFD 576

Query: 290 ---TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
               PD   WT MISG  +NG   +A  +F +M  +GV+P+  TI +   A + L AL  
Sbjct: 577 SIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQ 636

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G +IH+ A+K+  T+D  VG SL++MY+KC  ++ A  +F  I+  ++ +WN+M+ G  Q
Sbjct: 637 GRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQ 696

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
            G   +  +LF +M+   + P+ +T+  ++S    +G   EA    + M  +  +K    
Sbjct: 697 HGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIE 756

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKM 491
            ++ L     + G    A  +   M
Sbjct: 757 HYSCLADALGRAGLVKQAENLIESM 781



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 118/474 (24%), Positives = 211/474 (44%), Gaps = 47/474 (9%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACID-SNSIHLARKLHAFLNLVTEI-DVF 92
           NG   EA+ +   +   G K  + T  ++L+A       + L++++H     +  + D F
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V T L+  Y++  C+ +A  +FE     +L  W+AM+  Y++     + ++LF LM + G
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
              DDF    + + CG       GK +H+  IK G      V + +L +YVKCG +  A+
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--------------------CRE 252
             F+S+   D VAW +MISG  + GE + A  +F +M                    C  
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632

Query: 253 EIKLG------VVTFNI---------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
            ++ G       +  N          L+  Y + G  D A  + KR+E + IT     W 
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT----AWN 688

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVK 356
            M+ G AQ+G   + L LFK+M  +G+ P+ VT    +SAC+    ++   + + S+   
Sbjct: 689 AMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGD 748

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
            G   ++   + L +   +   ++ AE + + M  +     + +++A     G       
Sbjct: 749 YGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKR 808

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
           +  K+ E  + P   +  VL+S      ++ + + L + M K  KVK++   SW
Sbjct: 809 VATKLLE--LEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSW 860


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  342 bits (877), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 223/762 (29%), Positives = 374/762 (49%), Gaps = 90/762 (11%)

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           ++K G        N  +  ++K G+L  AR+ FE M  K+ V+ N MISGY + G   EA
Sbjct: 38  IVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEA 97

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
            +LFD M    ++   VT+ ILI  Y+QL Q   A E+  +M+  G  PD  T+  ++SG
Sbjct: 98  RKLFDGM----VERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 153

Query: 303 -----------------------------------FAQNGRTSQALDLFKEMSFVGVMPN 327
                                              + ++ R   A  LFKEM  +    +
Sbjct: 154 CNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEI----D 209

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             T  + + A   L  + +G +IHS  +K  F  +V V N+L++ YSK + +  A ++FD
Sbjct: 210 SFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFD 269

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES-------------DVPPNVITW-- 432
            + ++D  S+N +I+GY   G    A++LF ++Q +              +  N + W  
Sbjct: 270 EMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEM 329

Query: 433 --------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                               N L+  Y + G  +EA  +F  +       R+   W ++I
Sbjct: 330 GRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNL-----THRSAVPWTAMI 384

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
           + Y Q G     L +F KM+ +    +  T  S+L A A + + +  K++H  +++    
Sbjct: 385 SAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFM 444

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
           S++   ++L+D YAK G+I  +   F  M  ++I++WN++I  Y  +G   A L  F +M
Sbjct: 445 SNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEM 504

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
              GL+P+  +FL ++ A S +G+V+ G   F S+T+ Y++ P  EHY++++D+  RSG+
Sbjct: 505 VLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGR 564

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP-GDVLIQRLILQ 711
             EA + + +MPI+PD  +W ++L ACRIH N +LA  A ++LF++E   D      +  
Sbjct: 565 FNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSN 624

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS---W 768
           IYA  G+ E+  KV K  R+   +      W+E+K+  + F          + +      
Sbjct: 625 IYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDM 684

Query: 769 LQNVPENVTARSSHSGLCIEEEEKEEISGI--HSEKLALAFALIGSSQAPHTIRIVKNIR 826
           L    E +  +   S     E+EK ++  +  HSE+LA+AFALI + +    I ++KN+R
Sbjct: 685 LTKTMEELGYKPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGS-PILVMKNLR 743

Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            C+ CH   K +S +   EI + DS   HHF++G CSCGD+W
Sbjct: 744 ACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFCSCGDFW 785



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 240/539 (44%), Gaps = 58/539 (10%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           ++S Y K G L +AR++F+ M ER   TW+ +IG YS+  +++E  ELF  M + G  PD
Sbjct: 84  MISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPD 143

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
              F  +L  C           + + +IKLG      V N+++  Y K  +L  A + F+
Sbjct: 144 YVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFK 203

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            M E D   + +++     + +     ++   + +      V   N L+  Y++      
Sbjct: 204 EMPEIDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVID 263

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
           A ++   M       D  ++  +ISG+A +G+   A DLF+E+ F           + +S
Sbjct: 264 ARKLFDEMPE----QDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLS 319

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
             ++     MG +IH+  +      ++LVGNSL++MY+KC + E AE +F  +  +    
Sbjct: 320 IASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVP 379

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI-------------------- 436
           W +MI+ Y Q G+  +  +LF KM+++ V  +  T+  L+                    
Sbjct: 380 WTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFII 439

Query: 437 -SGYIQN--------------GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK 481
            SG++ N              G+  +AV  FQ M       RN  SWN++I+ Y Q G+ 
Sbjct: 440 KSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMP-----DRNIVSWNAMISAYAQNGEA 494

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAY-------LVASNKVKEIHGCVLRRSLESS 534
              L  F++M  S   P+ V+ L VL AC++       L   N + +I+    RR   + 
Sbjct: 495 EATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYA- 553

Query: 535 LPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQM 592
                S++D   +SG    +  +   M    D I W+S++    +H     A    DQ+
Sbjct: 554 -----SVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQL 607



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 120/499 (24%), Positives = 215/499 (43%), Gaps = 70/499 (14%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +D  C + RL+ A  +   +     ++   T+  +L A I  + I L +++H+F+  
Sbjct: 183 NTLVDSYCKSNRLDLACQLFKEMP----EIDSFTFAAVLCANIGLDDIVLGQQIHSFVIK 238

Query: 86  VTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
              + +VFV   LL  Y+K   + DAR++F++M E++  +++ +I  Y+ D + +   +L
Sbjct: 239 TNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDL 298

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           F  +         F F  +L    N  D+E G+ +H+  I         V NS++ +Y K
Sbjct: 299 FRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAK 358

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
           CGK   A   F ++  +  V W +MIS Y Q G  +E  +LF+KM +  +     TF  L
Sbjct: 359 CGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASL 418

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVF------------------------------ 294
           +R+   +    +  ++   +   G   +VF                              
Sbjct: 419 LRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNI 478

Query: 295 -TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            +W  MIS +AQNG     L  FKEM   G+ P+ V+    +SAC+           HS 
Sbjct: 479 VSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACS-----------HSG 527

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            V+ G        NS+  +Y      E    V DM+               C++G   +A
Sbjct: 528 LVEEGLWH----FNSMTQIYKLDPRREHYASVVDML---------------CRSGRFNEA 568

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            +L   M E  + P+ I W+ +++    + N++ A     ++   +++ R+ A + ++  
Sbjct: 569 EKL---MAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEEL-RDAAPYVNMSN 624

Query: 474 GYQQLGQKNNALGVFRKMQ 492
            Y   GQ  N   V + M+
Sbjct: 625 IYAAAGQWENVSKVHKAMR 643



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 163/340 (47%), Gaps = 14/340 (4%)

Query: 68  IDSNSI--HLARKLHAFLNLVTEID--VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLY 123
           I SN++   + R++HA   +VT  D  + V   L+ +YAKCG  ++A  +F ++  R+  
Sbjct: 320 IASNTLDWEMGRQIHA-QTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAV 378

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
            W+AMI AY +   + E ++LF  M Q  +  D   F  +L+A  +      GK +HS +
Sbjct: 379 PWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFI 438

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
           IK G        +++L VY KCG +  A + F+ M +++ V+WN+MIS Y Q GE +   
Sbjct: 439 IKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATL 498

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISG 302
           + F +M    ++   V+F  ++ + +  G  +  +     M  +  + P    +  ++  
Sbjct: 499 KSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDM 558

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
             ++GR ++A  L  EM    + P+ +  +S ++AC   K   +          M    D
Sbjct: 559 LCRSGRFNEAEKLMAEMP---IDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRD 615

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDV-----YSW 397
                ++ N+Y+   + E   +V   ++D+ V     YSW
Sbjct: 616 AAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSW 655



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 131/548 (23%), Positives = 234/548 (42%), Gaps = 107/548 (19%)

Query: 326 PNGVTITSAISACTDLKALAMGME----IHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
           PN +   +++++   L++  + +     I +  VK GF  D    N  +  + K  EL  
Sbjct: 6   PNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQ 65

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
           A ++F+ +  K+  S N MI+GY ++G  G+A +LF  M E       +TW +LI GY Q
Sbjct: 66  ARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVER----TAVTWTILIGGYSQ 121

Query: 442 NGNEDEAVDLFQRM-----------------GKNDKVKRNTASW---------------- 468
                EA +LF +M                 G N     N  +                 
Sbjct: 122 LNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIV 181

Query: 469 -NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV--KEIHGC 525
            N+L+  Y +  + + A  +F++M       +  T  +VL  CA +   + V  ++IH  
Sbjct: 182 GNTLVDSYCKSNRLDLACQLFKEMPE----IDSFTFAAVL--CANIGLDDIVLGQQIHSF 235

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
           V++ +   ++ V N+L+D Y+K  +++ +R +FD M  +D +++N +I GY   G    A
Sbjct: 236 VIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYA 295

Query: 586 LDLFDQMKSFGLKPNR---GTFLSI------------ILAHSLAGMVDLGKKVFCSITEC 630
            DLF +++       +    T LSI            I A ++    D    V  S+ + 
Sbjct: 296 FDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDM 355

Query: 631 Y----------QIIPMIEH-----YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
           Y           I   + H     ++AMI  Y + G  EE ++    M     S I +  
Sbjct: 356 YAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKM--RQASVIADQA 413

Query: 676 LTACRIHGNIDLAVLAIERL---FDLEPG---DVLIQRLILQIYAICGKPEDALKVRKLE 729
             A  +  +  +A L++ +    F ++ G   +V     +L +YA CG  +DA++  +  
Sbjct: 414 TFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQ-- 471

Query: 730 RENTRRNSFGQCWIEVKNLVYTFVTGGWSE----SYSDLLYSWLQNVPENVT-----ARS 780
            E   RN      +    ++  +   G +E    S+ +++ S LQ  P++V+     +  
Sbjct: 472 -EMPDRN-----IVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQ--PDSVSFLGVLSAC 523

Query: 781 SHSGLCIE 788
           SHSGL  E
Sbjct: 524 SHSGLVEE 531



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 177/395 (44%), Gaps = 26/395 (6%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVK 94
           G   E + + + +        + T+ +LL+A     S+ L ++LH+F+     + +VF  
Sbjct: 391 GFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSG 450

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           + LL VYAKCG + DA + F++M +RN+ +W+AMI AY+++      ++ F  MV  GL 
Sbjct: 451 SALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQ 510

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMH--SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           PD   F  +L AC + G  E G L H  S+     +   R    SV+ +  + G+   A 
Sbjct: 511 PDSVSFLGVLSACSHSGLVEEG-LWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAE 569

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDE-AHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           +    M  + D + W+S+++   +I +N E A R  D++   E       +  +   Y  
Sbjct: 570 KLMAEMPIDPDEIMWSSVLNAC-RIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAA 628

Query: 271 LGQCDVAMEMVKRMESLGITP-DVFTWTCM---ISGFAQNGRTSQALD--------LFKE 318
            GQ +   ++ K M   G+     ++W  +      F+ N R    ++        L K 
Sbjct: 629 AGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKT 688

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT-DDVLVGNSLINMYS--K 375
           M  +G  P+    TS      D K     ++ HS  + + F       G+ ++ M +   
Sbjct: 689 MEELGYKPD----TSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRA 744

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           C +  AA +V   I  +++   +S    + + G+C
Sbjct: 745 CIDCHAAIKVISKIVGREITVRDSTRFHHFRDGFC 779



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 49/224 (21%)

Query: 496 FYPNCVTILSVLPACAYLVAS----NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
           F PN +  L+ L + A L +     N V  I   +++   +      N  +  + K+G +
Sbjct: 4   FRPNALQNLTSLTSLASLQSPKLRLNVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGEL 63

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD--------------------- 590
             +R +F+ M  K+ ++ N +I GYV  G    A  LFD                     
Sbjct: 64  SQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLN 123

Query: 591 ----------QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
                     QM+  G +P+  TF++++   +       G ++   IT+    I  + + 
Sbjct: 124 QFKEAFELFVQMQRCGTEPDYVTFVTLLSGCN-------GHEMGNQITQVQTQIIKLGYD 176

Query: 641 SAMI------DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           S +I      D Y +S +L+ A +  ++MP E DS  + A+L A
Sbjct: 177 SRLIVGNTLVDSYCKSNRLDLACQLFKEMP-EIDSFTFAAVLCA 219


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  342 bits (877), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 209/643 (32%), Positives = 326/643 (50%), Gaps = 41/643 (6%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N+L+RS         A  +  +       P++F +  +I G   N     A+ ++  M  
Sbjct: 39  NLLLRSSLHFAATQYATVVFAQTPH----PNIFLYNTLIRGMVSNDAFRDAVSVYASMRQ 94

Query: 322 VGVMPNGVTITSAISACTDLKA-LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
            G  P+  T    + ACT L     +G+ +HSL +K GF  DV V   L+ +YSK   L 
Sbjct: 95  HGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLT 154

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL----- 435
            A +VFD I +K+V SW ++I GY ++G  G+A  LF  + E  + P+  T   +     
Sbjct: 155 DARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACS 214

Query: 436 ----------ISGYIQN----GN---EDEAVDLFQRMGKNDKVKR--------NTASWNS 470
                     I GY++     GN       VD++ + G  ++ +R        +   W++
Sbjct: 215 RVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSA 274

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           LI GY   G    AL VF +MQ     P+C  ++ V  AC+ L A        G +    
Sbjct: 275 LIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDE 334

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
             S+  +  +LID YAK G++  ++ +F GM  KD + +N++I G  + G   AA  +F 
Sbjct: 335 FLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFG 394

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           QM   G++P+  TF+ ++   + AG+VD G + F  ++  + + P IEHY  M+DL  R+
Sbjct: 395 QMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARA 454

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           G L EA + I  MP+E +S +W ALL  CR+H +  LA   +++L +LEP +     L+ 
Sbjct: 455 GLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVLLS 514

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ 770
            IY+   + ++A K+R    +   +   G  W+EV  +V+ F+ G  S   S  +Y  L+
Sbjct: 515 NIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEKLE 574

Query: 771 NVPENVTARSSHSG-----LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNI 825
           ++ +++     +         +EEEEKE   G HSEKLA+AFALI S+ A   IR+VKN+
Sbjct: 575 SLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALI-STGAKDVIRVVKNL 633

Query: 826 RMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           R+C  CHE  K VS +   EI + D+   HHF  G CSC DYW
Sbjct: 634 RVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 200/458 (43%), Gaps = 41/458 (8%)

Query: 71  NSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMI 129
            S+H A++ H  L  L    D ++   LL           A  VF      N++ ++ +I
Sbjct: 14  KSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLI 73

Query: 130 GAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD-FEAGKLMHSLVIKLGM 188
                +  +R+ V ++  M Q G  PD+F FP +L+AC      F  G  +HSLVIK G 
Sbjct: 74  RGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGF 133

Query: 189 SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF-- 246
                V+  ++ +Y K G L  AR+ F+ + EK+ V+W ++I GY + G   EA  LF  
Sbjct: 134 DWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRG 193

Query: 247 --------------------------------DKMCREEIKLG-VVTFNILIRSYNQLGQ 273
                                           D   RE   +G V     L+  Y + G 
Sbjct: 194 LLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCG- 252

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
              +ME  +R+    +  DV  W+ +I G+A NG   +ALD+F EM    V P+   +  
Sbjct: 253 ---SMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVG 309

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
             SAC+ L AL +G     L     F  + ++G +LI+ Y+KC  +  A+ VF  ++ KD
Sbjct: 310 VFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKD 369

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ 453
              +N++I+G    G+ G A+ +F +M +  + P+  T+  L+ G    G  D+    F 
Sbjct: 370 CVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFS 429

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            M     V      +  ++    + G    A  + R M
Sbjct: 430 GMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSM 467



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 215/491 (43%), Gaps = 44/491 (8%)

Query: 17  TKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACID-SNSIHL 75
           T   N    +T +  +  N    +A++V  S+   G      T+  +L+AC    +  H+
Sbjct: 61  TPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHV 120

Query: 76  ARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
              LH+  +    + DVFVKT L+ +Y+K G L DAR+VF+++ E+N+ +W+A+I  Y  
Sbjct: 121 GLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIE 180

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
              + E + LF  +++ GL PD F   +IL AC   GD  +G+ +   + + G      V
Sbjct: 181 SGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFV 240

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
             S++ +Y KCG +  ARR F+ M EKD V W+++I GY   G   EA  +F +M RE +
Sbjct: 241 ATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENV 300

Query: 255 K------LGV-----------------------------VTFNILIRSYNQLGQCDVAME 279
           +      +GV                             V    LI  Y + G    A E
Sbjct: 301 RPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKE 360

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           + K M       D   +  +ISG A  G    A  +F +M  VG+ P+G T    +  CT
Sbjct: 361 VFKGMRR----KDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCT 416

Query: 340 DLKALAMGMEIHS-LAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSW 397
               +  G    S ++     T  +     ++++ ++   L EA + +  M  + +   W
Sbjct: 417 HAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVW 476

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
            +++ G C+     +  E  +K      P N   + +L + Y  +   DEA  +   + +
Sbjct: 477 GALLGG-CRLHKDTQLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQ 535

Query: 458 NDKVKRNTASW 468
               K    SW
Sbjct: 536 KGMQKLPGCSW 546


>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Glycine max]
          Length = 617

 Score =  342 bits (877), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 204/593 (34%), Positives = 314/593 (52%), Gaps = 60/593 (10%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
           TP+ F WT +I  +A  G  SQAL  +  M    V P   T ++  SAC  ++  A+G +
Sbjct: 71  TPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQ 130

Query: 350 IHSLAVKMG-FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           +H+  + +G F+ D+ V N++I+MY KC  L  A  VFD + ++D               
Sbjct: 131 LHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERD--------------- 175

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                               VI+W  LI  Y + G+   A DLF  +   D V     +W
Sbjct: 176 --------------------VISWTGLIVAYTRIGDMRAARDLFDGLPVKDMV-----TW 210

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
            +++ GY Q     +AL VFR+++      + VT++ V+ ACA L AS     I     R
Sbjct: 211 TAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKYANWI-----R 265

Query: 529 RSLESS-------LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
              ESS       + V ++LID Y+K GN+  +  +F GM  +++ +++S+I G+ +HG 
Sbjct: 266 DIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVGFAIHGR 325

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
             AA+ LF  M   G+KPN  TF+ ++ A S AG+VD G+++F S+ +CY + P  E Y+
Sbjct: 326 ARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTAELYA 385

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            M DL  R+G LE+A++ +E MP+E D ++W ALL A  +HGN D+A +A +RLF+LEP 
Sbjct: 386 CMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVAEIASKRLFELEPD 445

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN-LVYTFVTGGWSES 760
           ++    L+   YA  G+ +D  KVRKL RE   + + G  W+E KN +++ FV G  S  
Sbjct: 446 NIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAKNGMIHKFVAGDVSHP 505

Query: 761 YSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQA 815
             + +   L ++ E +        L      I + EK  +   HSEKLALAF L+ S+  
Sbjct: 506 KINEIKKELNDLLERLKGIGYQPNLSSLPYGINDREKRLLLMAHSEKLALAFGLL-STDV 564

Query: 816 PHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             TI+I+KN+R+C  CH      S +   +I + D+   HHF NG CSC ++W
Sbjct: 565 GSTIKIMKNLRICEDCHIVMCGASKVTGRKIVVRDNTRFHHFLNGACSCSNFW 617



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 143/564 (25%), Positives = 244/564 (43%), Gaps = 70/564 (12%)

Query: 61  INLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCL---DDAREVFED 116
           + +L+ C   +S++ A+++HA + +   +   +V TKLL +      +      R +F  
Sbjct: 12  VRILERC---SSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQ 68

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           +   N + W+A+I AY+      + +  +  M +  + P  F F  +  AC        G
Sbjct: 69  LHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALG 128

Query: 177 KLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
             +H+  + LG  S    V N+V+ +YVKCG L  AR  F+ M E+D ++W         
Sbjct: 129 AQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTG------- 181

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                                       LI +Y ++G    A ++   +       D+ T
Sbjct: 182 ----------------------------LIVAYTRIGDMRAARDLFDGLP----VKDMVT 209

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           WT M++G+AQN     AL++F+ +   GV  + VT+   ISAC  L A      I  +A 
Sbjct: 210 WTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKYANWIRDIAE 269

Query: 356 KMGFT--DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
             GF   D+VLVG++LI+MYSKC  +E A  VF  +++++V+S++SMI G+   G    A
Sbjct: 270 SSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVGFAIHGRARAA 329

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            +LF  M E+ V PN +T+  +++     G  D+   LF  M K   V      +  +  
Sbjct: 330 IKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCYGVAPTAELYACMTD 389

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
              + G    AL +   M       +   +   L   +++  +  V EI    L      
Sbjct: 390 LLSRAGYLEKALQLVETMPME----SDGAVWGALLGASHVHGNPDVAEIASKRLFELEPD 445

Query: 534 SLPVMNSLIDTYAKSG---NIVYSRTIFDGMSSKDIITW------NSLICGYVLHGFWHA 584
           ++     L +TYA +G   ++   R +    + K    W      N +I  +V     H 
Sbjct: 446 NIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWVEAKNGMIHKFVAGDVSHP 505

Query: 585 AL--------DLFDQMKSFGLKPN 600
            +        DL +++K  G +PN
Sbjct: 506 KINEIKKELNDLLERLKGIGYQPN 529



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 103/440 (23%), Positives = 184/440 (41%), Gaps = 58/440 (13%)

Query: 9   FQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACI 68
           F QLH+      NP      +      G L++A++   S+  +       T+  L  AC 
Sbjct: 66  FSQLHT-----PNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACA 120

Query: 69  DSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWS 126
                 L  +LHA   L+     D++V   ++ +Y KCG L  AR VF++M ER++ +W+
Sbjct: 121 AVRHSALGAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWT 180

Query: 127 AMIGAYSR--DQR----------------WREVV-------------ELFFLMVQDGLFP 155
            +I AY+R  D R                W  +V             E+F  +  +G+  
Sbjct: 181 GLIVAYTRIGDMRAARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEI 240

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR--VRNSVLAVYVKCGKLIWARR 213
           D+     ++ AC   G  +    +  +    G        V ++++ +Y KCG +  A  
Sbjct: 241 DEVTLVGVISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYD 300

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M E++  +++SMI G+   G    A +LF  M    +K   VTF  ++ + +  G 
Sbjct: 301 VFKGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGL 360

Query: 274 CDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            D   ++   ME   G+ P    + CM    ++ G   +AL L + M     M +   + 
Sbjct: 361 VDQGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMP----MESDGAVW 416

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDMIK 390
            A+   + +       EI S  +     D+  +GN L+  N Y+     +   +V  +++
Sbjct: 417 GALLGASHVHGNPDVAEIASKRLFELEPDN--IGNYLLLSNTYASAGRWDDVSKVRKLLR 474

Query: 391 DKDV-----YSW----NSMI 401
           +K++     +SW    N MI
Sbjct: 475 EKNLKKNPGWSWVEAKNGMI 494



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 119/278 (42%), Gaps = 23/278 (8%)

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV---YSRTIFD 559
           ++ +L  C+ L   N+ KE+H  +  ++L+ S  V+  L+       ++    Y R +F 
Sbjct: 11  VVRILERCSSL---NQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFS 67

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
            + + +   W +LI  Y L G    AL  +  M+   + P   TF ++  A +      L
Sbjct: 68  QLHTPNPFAWTALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSAL 127

Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
           G ++             +   +A+ID+Y + G L  A    ++MP E D   W  L+ A 
Sbjct: 128 GAQLHAQTLLLGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMP-ERDVISWTGLIVAY 186

Query: 680 RIHGNIDLAVLAIERLFDLEP-GDVLIQRLILQIYAICGKPEDALKV-RKLERENTRRNS 737
              G++     A   LFD  P  D++    ++  YA    P DAL+V R+L  E      
Sbjct: 187 TRIGDMR----AARDLFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEG----- 237

Query: 738 FGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN 775
                +E+  +    V    ++  +    +W++++ E+
Sbjct: 238 -----VEIDEVTLVGVISACAQLGASKYANWIRDIAES 270


>gi|62318827|dbj|BAD93880.1| hypothetical protein [Arabidopsis thaliana]
 gi|62318835|dbj|BAD93890.1| hypothetical protein [Arabidopsis thaliana]
          Length = 635

 Score =  342 bits (876), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 204/600 (34%), Positives = 320/600 (53%), Gaps = 18/600 (3%)

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAI 335
           A+   +R+      PD F +  ++ G++++     ++ +F EM   G V P+  +    I
Sbjct: 46  ALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVI 105

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
            A  + ++L  G ++H  A+K G    + VG +LI MY  C  +E A +VFD +   ++ 
Sbjct: 106 KAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLV 165

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           +WN++I    +      A E+F KM    +  N  +WNV+++GYI+ G  + A  +F  M
Sbjct: 166 AWNAVITACFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEM 221

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
              D V     SW+++I G    G  N +   FR++Q +   PN V++  VL AC+   +
Sbjct: 222 PHRDDV-----SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGS 276

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD-IITWNSLIC 574
               K +HG V +      + V N+LID Y++ GN+  +R +F+GM  K  I++W S+I 
Sbjct: 277 FEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIA 336

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
           G  +HG    A+ LF++M ++G+ P+  +F+S++ A S AG+++ G+  F  +   Y I 
Sbjct: 337 GLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIE 396

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER 694
           P IEHY  M+DLYGRSGKL++A +FI  MPI P + +W  LL AC  HGNI+LA    +R
Sbjct: 397 PEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQR 456

Query: 695 LFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           L +L+P +     L+   YA  GK +D   +RK       + +     +EV   +Y F  
Sbjct: 457 LNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTA 516

Query: 755 GGWSESYSDLLYSWLQNV------PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFA 808
           G   +      +  L+ +          T   + +   +EEEEKE+    HSEKLALAFA
Sbjct: 517 GEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFA 576

Query: 809 LIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           L   S+  + IRIVKN+R+C  CH   K  S ++  EI + D    H FK+G CSC DYW
Sbjct: 577 LARLSKGAN-IRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 635



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 219/456 (48%), Gaps = 19/456 (4%)

Query: 61  INLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL--SVYAKCGCLDDAREVFEDM 117
           ++LL +C    ++    ++H  F+    + D +   KL+     +    L  AR +    
Sbjct: 1   LSLLNSC---KNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCF 57

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAG 176
            E + + ++ ++  YS        V +F  M++ G +FPD F F  +++A  N      G
Sbjct: 58  PEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTG 117

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
             MH   +K G+     V  +++ +Y  CG + +AR+ F+ M + + VAWN++I+  F+ 
Sbjct: 118 FQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRG 177

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
            +   A  +FDKM    +     ++N+++  Y + G+    +E  KR+ S     D  +W
Sbjct: 178 NDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGE----LESAKRIFSEMPHRDDVSW 229

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           + MI G A NG  +++   F+E+   G+ PN V++T  +SAC+   +   G  +H    K
Sbjct: 230 STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEK 289

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD-VYSWNSMIAGYCQAGYCGKAYE 415
            G++  V V N+LI+MYS+C  +  A  VF+ +++K  + SW SMIAG    G   +A  
Sbjct: 290 AGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 349

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           LF +M    V P+ I++  L+      G  +E  D F  M +   ++     +  ++  Y
Sbjct: 350 LFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLY 409

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
            + G+   A     +M      P  +   ++L AC+
Sbjct: 410 GRSGKLQKAYDFICQMP---IPPTAIVWRTLLGACS 442



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 2/145 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           NG  NE+      +   G      +   +L AC  S S    + LH F+        V V
Sbjct: 239 NGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV 298

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              L+ +Y++CG +  AR VFE M+E R + +W++MI   +   +  E V LF  M   G
Sbjct: 299 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 358

Query: 153 LFPDDFLFPKILQACGNCGDFEAGK 177
           + PD   F  +L AC + G  E G+
Sbjct: 359 VTPDGISFISLLHACSHAGLIEEGE 383


>gi|15221306|ref|NP_177601.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169836|sp|Q9CA54.1|PP122_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74630
 gi|12324801|gb|AAG52363.1|AC011765_15 hypothetical protein; 86841-88772 [Arabidopsis thaliana]
 gi|332197495|gb|AEE35616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 643

 Score =  342 bits (876), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 204/600 (34%), Positives = 320/600 (53%), Gaps = 18/600 (3%)

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAI 335
           A+   +R+      PD F +  ++ G++++     ++ +F EM   G V P+  +    I
Sbjct: 54  ALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVI 113

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
            A  + ++L  G ++H  A+K G    + VG +LI MY  C  +E A +VFD +   ++ 
Sbjct: 114 KAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLV 173

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           +WN++I    +      A E+F KM    +  N  +WNV+++GYI+ G  + A  +F  M
Sbjct: 174 AWNAVITACFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEM 229

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
              D V     SW+++I G    G  N +   FR++Q +   PN V++  VL AC+   +
Sbjct: 230 PHRDDV-----SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGS 284

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD-IITWNSLIC 574
               K +HG V +      + V N+LID Y++ GN+  +R +F+GM  K  I++W S+I 
Sbjct: 285 FEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIA 344

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
           G  +HG    A+ LF++M ++G+ P+  +F+S++ A S AG+++ G+  F  +   Y I 
Sbjct: 345 GLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIE 404

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER 694
           P IEHY  M+DLYGRSGKL++A +FI  MPI P + +W  LL AC  HGNI+LA    +R
Sbjct: 405 PEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQR 464

Query: 695 LFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           L +L+P +     L+   YA  GK +D   +RK       + +     +EV   +Y F  
Sbjct: 465 LNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTA 524

Query: 755 GGWSESYSDLLYSWLQNV------PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFA 808
           G   +      +  L+ +          T   + +   +EEEEKE+    HSEKLALAFA
Sbjct: 525 GEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFA 584

Query: 809 LIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           L   S+  + IRIVKN+R+C  CH   K  S ++  EI + D    H FK+G CSC DYW
Sbjct: 585 LARLSKGAN-IRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 218/455 (47%), Gaps = 17/455 (3%)

Query: 61  INLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLL--SVYAKCGCLDDAREVFEDMR 118
           ++LL +C +  ++     L  F+    + D +   KL+     +    L  AR +     
Sbjct: 9   LSLLNSCKNLRALTQIHGL--FIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFP 66

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAGK 177
           E + + ++ ++  YS        V +F  M++ G +FPD F F  +++A  N      G 
Sbjct: 67  EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            MH   +K G+     V  +++ +Y  CG + +AR+ F+ M + + VAWN++I+  F+  
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
           +   A  +FDKM    +     ++N+++  Y + G+    +E  KR+ S     D  +W+
Sbjct: 187 DVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGE----LESAKRIFSEMPHRDDVSWS 238

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            MI G A NG  +++   F+E+   G+ PN V++T  +SAC+   +   G  +H    K 
Sbjct: 239 TMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA 298

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD-VYSWNSMIAGYCQAGYCGKAYEL 416
           G++  V V N+LI+MYS+C  +  A  VF+ +++K  + SW SMIAG    G   +A  L
Sbjct: 299 GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRL 358

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F +M    V P+ I++  L+      G  +E  D F  M +   ++     +  ++  Y 
Sbjct: 359 FNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYG 418

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           + G+   A     +M      P  +   ++L AC+
Sbjct: 419 RSGKLQKAYDFICQMP---IPPTAIVWRTLLGACS 450



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 2/145 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           NG  NE+      +   G      +   +L AC  S S    + LH F+        V V
Sbjct: 247 NGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV 306

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              L+ +Y++CG +  AR VFE M+E R + +W++MI   +   +  E V LF  M   G
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 366

Query: 153 LFPDDFLFPKILQACGNCGDFEAGK 177
           + PD   F  +L AC + G  E G+
Sbjct: 367 VTPDGISFISLLHACSHAGLIEEGE 391


>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Brachypodium distachyon]
          Length = 805

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 221/764 (28%), Positives = 366/764 (47%), Gaps = 118/764 (15%)

Query: 79  LHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRW 138
           L AF +L    + +     LS   + G LD AR + ++M +RN+ +W+ +I A +R +R 
Sbjct: 63  LRAFRSL-PRPNAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERA 121

Query: 139 REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV 198
            E +EL+  M+++GL P  F    +L ACG     + G+  H L +K+G+     V N++
Sbjct: 122 GEALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVENAL 181

Query: 199 LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV 258
           L +Y KCG +  A R F+ M   + V++ +M+ G  Q G  D+A RLF +MCR  +++  
Sbjct: 182 LGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDP 241

Query: 259 VTFNILIRSYNQ-------------LGQCDVAM--------------------------- 278
           V  + ++ S  Q             LGQC  A+                           
Sbjct: 242 VAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMD 301

Query: 279 EMVKRMESLGITPDVFT--WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
           E VK  +SL   P++ T  W  +I+GF Q G  ++AL++   M   G  PN VT ++ ++
Sbjct: 302 EAVKVFDSL---PNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLA 358

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           +C                                    K  ++ +A  +FD I    V +
Sbjct: 359 SCI-----------------------------------KARDVLSARAMFDKISRPSVTT 383

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-----GYIQNGNEDEA--- 448
           WN++++GYCQ        ELF +MQ  +V P+  T  V++S     G +  G +  +   
Sbjct: 384 WNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASV 443

Query: 449 --------------VDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALG 486
                         VD++ + G+        N   +R+   WNS+I+G         A  
Sbjct: 444 RFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGLAIHSLNEEAFD 503

Query: 487 VFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
            F++M+ +   P   +  S++ +CA L +  + ++IH  +++   + ++ V ++LID YA
Sbjct: 504 FFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQNVYVGSALIDMYA 563

Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
           K GN+  +R  FD M +K+I+ WN +I GY  +GF   A+DLF+ M +   +P+  TF++
Sbjct: 564 KCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIA 623

Query: 607 IILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
           ++   S +G+VD     F S+   Y I P+ EHY+ +ID  GR+G+L E    I++MP +
Sbjct: 624 VLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCK 683

Query: 667 PDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR 726
            D  +WE LL AC +H N +L   A + LF L+P +     L+  IYA  G+  DA  VR
Sbjct: 684 DDPIVWEVLLAACAVHHNAELGECAAKHLFRLDPKNPSPYVLLSNIYASLGRHGDASGVR 743

Query: 727 KLERENTRRNSFGQCWIEVKNLVYTFVT-------GGWSESYSD 763
            L          G  WI+ K+ V+ F+        GG S+ +S+
Sbjct: 744 ALMSSRGVVKGRGYSWIDHKDGVHAFMVADDLQTDGGESKMFSN 787



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 153/589 (25%), Positives = 280/589 (47%), Gaps = 55/589 (9%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKT 95
           R  EA+ + + +  +G      T  ++L AC    ++   R+ H   + +  + ++FV+ 
Sbjct: 120 RAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFVEN 179

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            LL +Y KCG ++DA  +F+ M   N  +++AM+G   +     + + LF  M + G+  
Sbjct: 180 ALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRV 239

Query: 156 DDFLFPKIL----QACGNCGD----FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           D      +L    QAC +  D    F  G+ +H+L+++ G    + V NS++ +Y KC +
Sbjct: 240 DPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQ 299

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           +  A + F+S+     V+WN +I+G+ Q G   +A  + + M     +   VT++ ++ S
Sbjct: 300 MDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLAS 359

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
             +      A  M  ++      P V TW  ++SG+ Q       ++LF+ M    V P+
Sbjct: 360 CIKARDVLSARAMFDKISR----PSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPD 415

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             T+   +S+C+ L  L +G ++HS +V+    +D+ V + L++MYSKC ++  A  +F+
Sbjct: 416 RTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFN 475

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS---------- 437
            + ++DV  WNSMI+G        +A++ F +M+ + + P   ++  +I+          
Sbjct: 476 RMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQ 535

Query: 438 -----------GYIQNGNEDEA-VDLFQRMGKNDK--------VKRNTASWNSLIAGYQQ 477
                      GY QN     A +D++ + G  D         V +N  +WN +I GY Q
Sbjct: 536 GRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQ 595

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
            G    A+ +F  M ++   P+ VT ++VL  C++   S  V E        S+ES+  +
Sbjct: 596 NGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSH---SGLVDE--AIAFFNSMESTYGI 650

Query: 538 M------NSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLH 579
                    LID   ++G +V    + D M  K D I W  L+    +H
Sbjct: 651 TPLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVH 699



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 148/310 (47%), Gaps = 4/310 (1%)

Query: 14  SLLTKKSNPRFR--DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSN 71
           ++  K S P     +T L   C      + + +   +  Q  +  R T   +L +C    
Sbjct: 371 AMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLG 430

Query: 72  SIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIG 130
            + L  ++H A +  +   D+FV + L+ +Y+KCG +  AR +F  M ER++  W++MI 
Sbjct: 431 ILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMIS 490

Query: 131 AYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSC 190
             +      E  + F  M  +G+ P +  +  ++ +C        G+ +H+ ++K G   
Sbjct: 491 GLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQ 550

Query: 191 VRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC 250
              V ++++ +Y KCG +  AR FF+ M  K+ VAWN MI GY Q G  ++A  LF+ M 
Sbjct: 551 NVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYML 610

Query: 251 REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRT 309
             E +   VTF  ++   +  G  D A+     MES  GITP    +TC+I G  + GR 
Sbjct: 611 TTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGITPLAEHYTCLIDGLGRAGRL 670

Query: 310 SQALDLFKEM 319
            +   L   M
Sbjct: 671 VEVEALIDNM 680



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 156/347 (44%), Gaps = 27/347 (7%)

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLF 452
           D +  N ++  Y  +G    A   F  +      PN  ++N  +S   + G+ D A  L 
Sbjct: 42  DTFLINRLVELYSVSGLPCDALRAFRSLPR----PNAYSYNAALSAARRAGDLDAARALL 97

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
             M       RN  SWN++IA   +  +   AL ++  M      P   T+ SVL AC  
Sbjct: 98  DEM-----PDRNVVSWNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGA 152

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 572
           + A +  +  HG  ++  L+ +L V N+L+  Y K G +  +  +FDGM+S + +++ ++
Sbjct: 153 VAALDDGRRCHGLAVKVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAM 212

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII--LAHSLAGMVDLGKKVFCSITEC 630
           + G V  G    AL LF +M   G++ +     S++   A + A   D+ +     + +C
Sbjct: 213 MGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAF--RLGQC 270

Query: 631 YQIIPMIEHY-------SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
              + + + +       +++ID+Y +  +++EA++  + +P    +  W  L+T     G
Sbjct: 271 IHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLP-NISTVSWNILITGFGQAG 329

Query: 684 NI--DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKL 728
           +    L VL +      EP +V    ++    A C K  D L  R +
Sbjct: 330 SYAKALEVLNLMEESGSEPNEVTYSNML----ASCIKARDVLSARAM 372


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  341 bits (875), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 197/588 (33%), Positives = 311/588 (52%), Gaps = 38/588 (6%)

Query: 318  EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
            EM   G+        S ++ C    A+  G  +H+  +K  +   V +   LI +Y+KC 
Sbjct: 467  EMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCR 526

Query: 378  ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI- 436
             L  A RV D + +++V SW +MI+GY Q GY  +A  LF++M  S   PN  T+  ++ 
Sbjct: 527  CLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLT 586

Query: 437  ----SGYIQNGNE-----------------DEAVDLFQRMGK--------NDKVKRNTAS 467
                S   Q G +                    +D++ + GK        +   +R+  S
Sbjct: 587  SCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVS 646

Query: 468  WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
              ++I+GY QLG    AL +FR++Q      N VT  SVL A + L A +  +++H  VL
Sbjct: 647  CTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVL 706

Query: 528  RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
            R  L   + + NSLID Y+K G++ YSR IFD M  + +I+WN+++ GY  HG    A++
Sbjct: 707  RAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVE 766

Query: 588  LFDQMKSFG-LKPNRGTFLSIILAHSLAGMVDLGKKVFCS-ITECYQIIPMIEHYSAMID 645
            LF  MK    +KP+  TFL+++   S  GM D G ++F   + +     P IEHY  ++D
Sbjct: 767  LFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVD 826

Query: 646  LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
            L+GR+G++EEA EFI+ MP EP ++IW +LL ACR+H N+ +      RL ++E  +   
Sbjct: 827  LFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGN 886

Query: 706  QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
              ++  +YA  G+ +D   VR+L +E       G+ WIE+   ++TF     S    + +
Sbjct: 887  YVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEV 946

Query: 766  YSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIR 820
            ++ ++ +   +        L      +++E+KE+I   HSEKLALAF LI  +     +R
Sbjct: 947  FAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLI-CTPGGTPVR 1005

Query: 821  IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            I+KN+R+CV CH  AK++S ++  E+ L D    HH   G CSCGDYW
Sbjct: 1006 IIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 244/518 (47%), Gaps = 53/518 (10%)

Query: 3   IWILTT--FQQLHSLLTKKSNPRFRD-----------THLDFLCGNGRLNEAITVLDSIA 49
           IW +T+  F +   +L+  SNP  R              L  LC N +L EA+     + 
Sbjct: 413 IWKITSLIFHRPKQVLSSISNPFSRQRILLSTFPANSPDLKTLCSNRQLKEALL---EMG 469

Query: 50  TQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLD 108
            QG +V    Y ++L  CI   +I   +++HA  +    E  V+++T+L+ +Y KC CL 
Sbjct: 470 IQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLG 529

Query: 109 DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACG 168
           DAR V ++M ERN+ +W+AMI  YS+     E + LF  M+  G  P++F F  +L +C 
Sbjct: 530 DARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCT 589

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
           +   F+ G+ +HSLVIK        V +S+L +Y K GK+  ARR F+ + E+D V+  +
Sbjct: 590 SSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTA 649

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA----------- 277
           +ISGY Q+G ++EA  LF ++ RE ++   VT+  ++ + + L   D             
Sbjct: 650 IISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAK 709

Query: 278 -----------MEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFK 317
                      ++M  +  SL  +  +F         +W  M+ G++++G   +A++LFK
Sbjct: 710 LPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFK 769

Query: 318 EMSFVG-VMPNGVTITSAISACTDLKALAMGMEIHSLAV--KMGFTDDVLVGNSLINMYS 374
            M     V P+ VT  + +S C+       G+EI    V  K GF  ++     +++++ 
Sbjct: 770 LMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFG 829

Query: 375 KCEELEAA-ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
           +   +E A E +  M  +     W S++ G C+        E   +        N   + 
Sbjct: 830 RAGRVEEAFEFIKKMPFEPTAAIWGSLL-GACRVHQNVHIGEFVARRLLEIESENAGNYV 888

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
           +L + Y   G  D+   + + M +   +K    SW  L
Sbjct: 889 ILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIEL 926


>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 950

 Score =  341 bits (875), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 217/719 (30%), Positives = 362/719 (50%), Gaps = 54/719 (7%)

Query: 182 LVIKLGMSCVRRVRNSV-LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
           L++    S    V NS  ++   + G++  AR+FF+S+  K   +WNS++SGYF  G   
Sbjct: 6   LILHRAYSTSTGVNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPR 65

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
           EA ++FD+M    I    V++N L+  Y +    + A  + + M       +V +WT M+
Sbjct: 66  EARQMFDEMPERNI----VSWNGLVSGYIKNRMIEEARNVFEIMPER----NVVSWTAMV 117

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
            G+ Q G   +A  LF  M       N V+ T       D   +    +++     M   
Sbjct: 118 KGYVQEGMVVEAELLFWRMP----ERNEVSWTVMFGGLIDGGRIDDARKLYD----MMPG 169

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            DV+   ++I    +   ++ A  +FD +++++V +W +MI GY Q      A +LF  M
Sbjct: 170 KDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVM 229

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM------------------GKNDKVK 462
            E       ++W  ++ GY  +G  ++A + F+ M                  G+  K +
Sbjct: 230 PEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKAR 285

Query: 463 R--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV 514
           R        + A+W  +I  Y++ G +  AL +F +MQ     P+  +++S+L  CA L 
Sbjct: 286 RVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLA 345

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
           +    +++H  ++R   +  + V + L+  Y K G +V ++ +FD   SKDII WNS+I 
Sbjct: 346 SLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIIS 405

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
           GY  HG    AL +F +M   G  PN+ T ++I+ A S  G ++ G ++F S+   + + 
Sbjct: 406 GYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVT 465

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER 694
           P +EHYS  +D+ GR+GK+++AME I  M I+PD+++W ALL AC+ H  +DLA +A ++
Sbjct: 466 PTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLAEVAAKK 525

Query: 695 LFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           LF++EP +     L+  I A   K  D  ++RK  R        G  WIEV   V+ F  
Sbjct: 526 LFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRTKNVSKFPGCSWIEVGKKVHMFTR 585

Query: 755 GGWSESYSDLLYSWLQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLALAFA 808
           GG        +   +    + +   + +S  C      ++EEEK +    HSE+LA+A+ 
Sbjct: 586 GGIRNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYG 645

Query: 809 LIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
           L+   +    IR++KN+R+C  CH   K +S +   EI L D+   HHF NG+CSC DY
Sbjct: 646 LLKLPEGV-PIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDY 703



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 211/459 (45%), Gaps = 34/459 (7%)

Query: 75  LARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
           L R+     + + E ++     L+S Y K   +++AR VFE M ERN+ +W+AM+  Y +
Sbjct: 63  LPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNVVSWTAMVKGYVQ 122

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQA-----CGNCGDFEAGKLMHSLVIKLGMS 189
           +    E   LF+ M +        +F  ++            D   GK + +    +G  
Sbjct: 123 EGMVVEAELLFWRMPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKDVVASTNMIGGL 182

Query: 190 CVR-------------RVRN-----SVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
           C               R RN     +++  Y +  ++  AR+ FE M EK  V+W SM+ 
Sbjct: 183 CREGRVDEAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEVSWTSMLL 242

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
           GY   G  ++A   F+ M  +     V+  N +I +  ++G+   A  +  +ME      
Sbjct: 243 GYTLSGRIEDAEEFFEVMPMKP----VIACNAMIVALGEVGEIVKARRVFDQMEDR---- 294

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           D  TW  MI  + + G   +AL+LF +M   GV P+  ++ S +S C  L +L  G ++H
Sbjct: 295 DNATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVH 354

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           +  V+  F  DV V + L+ MY KC EL  A+ VFD    KD+  WNS+I+GY   G   
Sbjct: 355 AHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGE 414

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
           +A ++F +M  S   PN +T   +++     G  +E +++F+ M     V      ++  
Sbjct: 415 EALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCT 474

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +    + G+ + A+ +   M      P+     ++L AC
Sbjct: 475 VDMLGRAGKVDKAMELINSM---TIKPDATVWGALLGAC 510



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 142/555 (25%), Positives = 248/555 (44%), Gaps = 87/555 (15%)

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           +S  ++ G +++AR+ F+ +R + + +W++++  Y  +   RE  ++F  M +  +   +
Sbjct: 24  ISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNIVSWN 83

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
            L    ++   N    EA  +   +  +  +S    V+      YV+ G ++ A   F  
Sbjct: 84  GLVSGYIK---NRMIEEARNVFEIMPERNVVSWTAMVKG-----YVQEGMVVEAELLFWR 135

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
           M E++ V+W  M  G    G  D+A +L+D M  ++    VV    +I    + G+ D A
Sbjct: 136 MPERNEVSWTVMFGGLIDGGRIDDARKLYDMMPGKD----VVASTNMIGGLCREGRVDEA 191

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG--VTITSAI 335
            E+   M       +V TWT MI+G+ QN R   A  LF+      VMP    V+ TS +
Sbjct: 192 REIFDEMRER----NVITWTTMITGYGQNKRVDVARKLFE------VMPEKTEVSWTSML 241

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
              T    L+  +E      ++     V+  N++I    +  E+  A RVFD ++D+D  
Sbjct: 242 LGYT----LSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRDNA 297

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPP---------------------------- 427
           +W  MI  Y + G+  +A ELF +MQ   V P                            
Sbjct: 298 TWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHL 357

Query: 428 -------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
                  +V   +VL++ Y++ G   +A  +F R    D +      WNS+I+GY   G 
Sbjct: 358 VRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDII-----MWNSIISGYASHGL 412

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
              AL VF +M  S   PN VT++++L AC+Y     K++E  G  +  S+ES   V  +
Sbjct: 413 GEEALKVFHEMPLSGTMPNKVTLIAILTACSY---GGKLEE--GLEIFESMESKFCVTPT 467

Query: 541 L------IDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLHGFWHAALDLFD--Q 591
           +      +D   ++G +  +  + + M+ K D   W +L+         H+ LDL +   
Sbjct: 468 VEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKT----HSRLDLAEVAA 523

Query: 592 MKSFGLKP-NRGTFL 605
            K F ++P N G ++
Sbjct: 524 KKLFEIEPENAGPYI 538



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 174/383 (45%), Gaps = 55/383 (14%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           +    ID   I  ARKL+   +++   DV   T ++    + G +D+ARE+F++MRERN+
Sbjct: 147 MFGGLIDGGRIDDARKLY---DMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNV 203

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE-AGKLMHS 181
            TW+ MI  Y +++R     +LF +M +      +  +  +L      G  E A +    
Sbjct: 204 ITWTTMITGYGQNKRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEV 259

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
           + +K  ++C     N+++    + G+++ ARR F+ M+++D   W  MI  Y + G   E
Sbjct: 260 MPMKPVIAC-----NAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELE 314

Query: 242 AHRLFDKMCREEIKLG-----------------------------------VVTFNILIR 266
           A  LF +M R+ ++                                     V   ++L+ 
Sbjct: 315 ALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMT 374

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            Y + G+   A  +  R  S     D+  W  +ISG+A +G   +AL +F EM   G MP
Sbjct: 375 MYVKCGELVKAKLVFDRFPS----KDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMP 430

Query: 327 NGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEELEAA-ER 384
           N VT+ + ++AC+    L  G+EI  S+  K   T  V   +  ++M  +  +++ A E 
Sbjct: 431 NKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMEL 490

Query: 385 VFDMIKDKDVYSWNSMIAGYCQA 407
           +  M    D   W +++ G C+ 
Sbjct: 491 INSMTIKPDATVWGALL-GACKT 512



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 40/338 (11%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFLNLVTEI 89
           LC  GR++EA  + D +        RN  T+  ++     +  + +ARKL   +   TE+
Sbjct: 182 LCREGRVDEAREIFDEMR------ERNVITWTTMITGYGQNKRVDVARKLFEVMPEKTEV 235

Query: 90  D----------------------------VFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
                                        V     ++    + G +  AR VF+ M +R+
Sbjct: 236 SWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVALGEVGEIVKARRVFDQMEDRD 295

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
             TW  MI AY R     E +ELF  M + G+ P       IL  C      + G+ +H+
Sbjct: 296 NATWRGMIKAYERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHA 355

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
            +++        V + ++ +YVKCG+L+ A+  F+    KD + WNS+ISGY   G  +E
Sbjct: 356 HLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEE 415

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMI 300
           A ++F +M         VT   ++ + +  G+ +  +E+ + MES   +TP V  ++C +
Sbjct: 416 ALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTV 475

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
               + G+  +A++L   M+   + P+     + + AC
Sbjct: 476 DMLGRAGKVDKAMELINSMT---IKPDATVWGALLGAC 510


>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1111

 Score =  341 bits (875), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 251/890 (28%), Positives = 421/890 (47%), Gaps = 62/890 (6%)

Query: 36   GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL-VTEIDVFVK 94
            G   EA+ +   +  +G KV   + I++L AC    ++   R  H+++     +I V + 
Sbjct: 227  GESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLG 286

Query: 95   TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
            T L+ +YAKCG +D A EVF  M E+N+YTWS+ +   + +    + ++LF LM QDG+ 
Sbjct: 287  TTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVT 346

Query: 155  PDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+   F  +L+ C   G  + G K   S+  + G+         ++ +Y + G+L  A  
Sbjct: 347  PNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVS 406

Query: 214  FFESMDEKDGVA-WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
              + M  K   A W+S++    ++ +N E   L  K   E        + +L   Y    
Sbjct: 407  IIQQMPMKAHAAVWSSLLHAS-RMYKNLELGVLASKKMLELETSNHGAYVLLSNIYADSD 465

Query: 273  QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN---GRTSQAL---------DLFKEMS 320
              D    + + M+S G+          ++G       G  S            D+ + + 
Sbjct: 466  DWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYNEIDAVWKDISRRLR 525

Query: 321  FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK-MGFTDDVLVGNSLINMYSKCEEL 379
              G   +   +   I       AL +  E  ++A   M    DV +   ++     C + 
Sbjct: 526  LAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKADVPI--RIVKNLRVCGDC 583

Query: 380  EAAERVFDMIKDKD--VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP--PNVITWNVL 435
                 +   I +++  V   N         GY GK +E+  +M  S+V   PN +T+  +
Sbjct: 584  HQVSMMISKIFNREIIVRDRNRFHHFKDGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSM 643

Query: 436  ISGYIQNGNEDEAV---DLFQRMGKNDKVK---------------------------RNT 465
            IS  +  GN++E V    L  + G  ++VK                           +N 
Sbjct: 644  ISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNL 703

Query: 466  ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
             SWN++I  + Q G     L  F   +     P+  T L+VL  C  +      + IHG 
Sbjct: 704  VSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGL 763

Query: 526  VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
            ++     ++  +  +L+D YAK G +  S T+F  ++S D + W +++  Y  HG+   A
Sbjct: 764  IMFCGFNANTCITTALLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDA 823

Query: 586  LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
            +  F+ M  +GL P+  TF  ++ A S +G+V+ G+  F ++++ Y+I P ++HYS M+D
Sbjct: 824  IKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVD 883

Query: 646  LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
            L GRSG L++A   I++MP+EP S +W ALL ACR++ +  L   A +RLF+LEP D   
Sbjct: 884  LMGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRN 943

Query: 706  QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
              ++  IY+  G  +DA ++R L ++     + G  +IE  N ++ FV G WS   S+ +
Sbjct: 944  YIMLSNIYSASGLWKDASRIRNLMKQKGLVRASGYSYIEHGNKIHKFVVGDWSHPESEKI 1003

Query: 766  YSWLQNVPENV------TARSSHSGLCIEEEEKEEISGIHSEKLALAFA-LIGSSQAPHT 818
               L+ + + +       +R+      ++E+ KEE+   HSEK+A+AF  L+ S   P  
Sbjct: 1004 QKKLKEIRKKMKSELGFKSRTEFVLHDVDEDVKEEMINQHSEKIAMAFGLLVISPMEPII 1063

Query: 819  IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            IR  KN+R+C  CHETAK +S++    I + DSK  HHF  G CSC DYW
Sbjct: 1064 IR--KNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLEGSCSCRDYW 1111



 Score =  279 bits (713), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 177/586 (30%), Positives = 298/586 (50%), Gaps = 56/586 (9%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEM--SFVGVMPNGVTITSAISACTDLKALAMGM 348
           P +F    MI    ++    ++ D +  +  S  G+ P+  T+   + ACT L     G+
Sbjct: 77  PTLFALNSMIRAHCKSPVPEKSFDFYSRILSSGNGLKPDNYTVNFLVQACTGLGMRETGL 136

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           ++H + ++ GF +D  V   LI++Y++   L++  +VF+ +   D     +M+    + G
Sbjct: 137 QVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACARCG 196

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
               A +LF  M E D     I WN +ISGY Q G   EA++LF  M             
Sbjct: 197 DVAFARKLFEGMPEKD----PIAWNAMISGYAQVGESREALNLFHLM------------- 239

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
                  Q  G K N                 V+++SVL AC  L A ++ +  H  + R
Sbjct: 240 -------QLEGVKVNG----------------VSMISVLSACTQLGALDQGRWAHSYIER 276

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
             ++ ++ +  +L+D YAK G++  +  +F GM  K++ TW+S + G  ++GF    L L
Sbjct: 277 NKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKL 336

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F  MK  G+ PN  TF+S++   S+ G VD G+K F S+   + I P ++HY  ++DLY 
Sbjct: 337 FSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYA 396

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+G+LE+A+  I+ MP++  +++W +LL A R++ N++L VLA +++ +LE  +     L
Sbjct: 397 RAGRLEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNLELGVLASKKMLELETSNHGAYVL 456

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  IYA     ++   VR+  +    R   G   +EV   V+ F  G  S       Y+ 
Sbjct: 457 LSNIYADSDDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPK----YNE 512

Query: 769 LQNVPENVTARSSHSG---------LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTI 819
           +  V ++++ R   +G           I+EEEKE+   +HSEK A+AF ++ S +A   I
Sbjct: 513 IDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIM-SLKADVPI 571

Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCG 865
           RIVKN+R+C  CH+ +  +S + + EI + D    HHFK+G+   G
Sbjct: 572 RIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGRGYLG 617



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 169/696 (24%), Positives = 314/696 (45%), Gaps = 86/696 (12%)

Query: 80  HAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
           H   N V+  D   +T +++  A+CG +  AR++FE M E++   W+AMI  Y++    R
Sbjct: 171 HKVFNSVSYPDFVCRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESR 230

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E + LF LM  +G+  +      +L AC   G  + G+  HS + +  +    R+  +++
Sbjct: 231 EALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLV 290

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +Y KCG +  A   F  M+EK+   W+S ++G    G  ++  +LF  M ++ +    V
Sbjct: 291 DLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAV 350

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
           TF  ++R  + +G  D   +    M +  GI P +  + C++  +A+ GR   A+ + ++
Sbjct: 351 TFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQ 410

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD---VLVGNSLINMYSK 375
           M    +  +    +S + A    K L +G+      +++  ++    VL    L N+Y+ 
Sbjct: 411 MP---MKAHAAVWSSLLHASRMYKNLELGVLASKKMLELETSNHGAYVL----LSNIYAD 463

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI------KMQESDVPPNV 429
            ++ +    V   +K K V        G       G+ +E F+      K  E D     
Sbjct: 464 SDDWDNVSHVRQSMKSKGVRKQ----PGCSVMEVNGEVHEFFVGDKSHPKYNEIDAVWKD 519

Query: 430 ITWNVLISGY----------IQNGNEDEAV------------------DLFQRMGKNDKV 461
           I+  + ++GY          I    +++A+                  D+  R+ KN +V
Sbjct: 520 ISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKADVPIRIVKNLRV 579

Query: 462 --------------------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC-FYPNC 500
                                R+   ++    G   LG+    L   R M+S   F PN 
Sbjct: 580 CGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGRGYLGKCFEVLS--RMMRSEVGFRPNE 637

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           VT LS++ AC +     +   IHG V++  +   + V+N+L++ Y K+G+++ S  +F+ 
Sbjct: 638 VTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLISSCKLFED 697

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           +S K++++WN++I  ++ +G     L  F+  +  GLKP++ TFL+++      G+V L 
Sbjct: 698 LSVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLS 757

Query: 621 KKV-----FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
           + +     FC       I       +A++DLY + G+LE++     ++   PDS  W A+
Sbjct: 758 QGIHGLIMFCGFNANTCIT------TALLDLYAKLGRLEDSSTVFLEI-TSPDSMAWTAM 810

Query: 676 LTACRIHGNIDLAVLAIERL--FDLEPGDVLIQRLI 709
           L A   HG    A+   E +  + L P  V    L+
Sbjct: 811 LAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLL 846



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 185/402 (46%), Gaps = 44/402 (10%)

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF--FLMV 149
           FVK   LS +     LD A ++ +   +  L+  ++MI A+ +     +  + +   L  
Sbjct: 52  FVKAVALSDHTY---LDYANQILDRSDKPTLFALNSMIRAHCKSPVPEKSFDFYSRILSS 108

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            +GL PD++    ++QAC   G  E G  +H + I+ G      V+  ++++Y + G L 
Sbjct: 109 GNGLKPDNYTVNFLVQACTGLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLD 168

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
              + F S+   D V   +M++   + G+   A +LF+ M  +                 
Sbjct: 169 SCHKVFNSVSYPDFVCRTAMVTACARCGDVAFARKLFEGMPEK----------------- 211

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
                                 D   W  MISG+AQ G + +AL+LF  M   GV  NGV
Sbjct: 212 ----------------------DPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGV 249

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           ++ S +SACT L AL  G   HS   +      V +G +L+++Y+KC +++ A  VF  +
Sbjct: 250 SMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGDMDKAMEVFWGM 309

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
           ++K+VY+W+S + G    G+  K  +LF  M++  V PN +T+  ++ G    G  DE  
Sbjct: 310 EEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ 369

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
             F  M     ++     +  L+  Y + G+  +A+ + ++M
Sbjct: 370 KHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQM 411



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/379 (23%), Positives = 169/379 (44%), Gaps = 18/379 (4%)

Query: 23  RFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLH 80
           R R+    F  G G L +   VL  +       R N  T+++++ AC+   +      +H
Sbjct: 601 RDRNRFHHFKDGRGYLGKCFEVLSRMMRSEVGFRPNEVTFLSMISACVHGGNKEEGVCIH 660

Query: 81  AFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 137
             +    ++ E+ V     L+++Y K G L  + ++FED+  +NL +W+ MI  + ++  
Sbjct: 661 GLVMKSGVLEEVKVV--NALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGL 718

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
             E +  F +    GL PD   F  +L+ C + G     + +H L++  G +    +  +
Sbjct: 719 AEEGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTA 778

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           +L +Y K G+L  +   F  +   D +AW +M++ Y   G   +A + F+ M    +   
Sbjct: 779 LLDLYAKLGRLEDSSTVFLEITSPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPD 838

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLF 316
            VTF  L+ + +  G  +      + M +   I P +  ++CM+    ++G    A  L 
Sbjct: 839 HVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLI 898

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI---NMY 373
           KEM    + P+     + + AC   K   +G +    A K  F  +   G + I   N+Y
Sbjct: 899 KEMP---MEPSSGVWGALLGACRVYKDTQLGTK----AAKRLFELEPRDGRNYIMLSNIY 951

Query: 374 SKCEELEAAERVFDMIKDK 392
           S     + A R+ +++K K
Sbjct: 952 SASGLWKDASRIRNLMKQK 970


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  341 bits (875), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 220/726 (30%), Positives = 361/726 (49%), Gaps = 69/726 (9%)

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A + F+ M++ D   WN MI G+   G   EA +L+ +M    +K    T+  +I+S   
Sbjct: 79  ALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVKADSFTYPFVIKSVTG 138

Query: 271 LGQCDVAMEMVKRMESLGITPDVF-------------------------------TWTCM 299
           +   +   ++   +  L    DV+                               +W  M
Sbjct: 139 ISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERDIVSWNSM 198

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           ISG+       ++L LFKEM   G  P+  +  SA+ AC+ + +  MG E+H  AV+   
Sbjct: 199 ISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHCHAVRSRI 258

Query: 360 -TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
            T DV+V  S+++MYSK  E+  AER+F  I  +++ +WN +I  Y +      A+  F 
Sbjct: 259 ETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVTDAFLCFQ 318

Query: 419 KMQESD-VPPNVITW-NVLISGYIQNGN-----------------EDEAVDLFQRMGK-- 457
           KM E + + P+VIT  N+L +  I  G                  +   +D++   G+  
Sbjct: 319 KMSEQNGLQPDVITLINLLPACAILEGRTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLK 378

Query: 458 -----NDKV-KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
                 D++ ++N  SWNS+IA Y Q G+  +AL +F+K+  S   P+  TI S+LPA A
Sbjct: 379 SAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYA 438

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
             ++ ++ ++IH  +++    S+  ++NSL+  YA  G++  +R  F+ +  KD+++WNS
Sbjct: 439 ESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNS 498

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
           +I  Y +HGF   ++ LF +M +  + PN+ TF S++ A S++GMVD G + F S+   Y
Sbjct: 499 IIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREY 558

Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
            I P IEHY  M+DL GR+G    A  FI +MP  P + IW +LL A R H +I +A  A
Sbjct: 559 GIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPFLPTARIWGSLLNASRNHNDITVAEFA 618

Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
            E++F +E  +     L+L +YA   + ED  +++ L        +  +  +E K+  + 
Sbjct: 619 AEQIFKMEHDNTGCYVLLLNMYAEARRWEDVNRIKLLMESKGISRTSSRSTVEAKSKTHV 678

Query: 752 FVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC--IEEEEKEEISGI-------HSEK 802
              G  S   ++ +Y  L  V   +            + +  +E ++         HS +
Sbjct: 679 LTNGDRSHVETNKIYEVLDIVSRMIGEEEEEDSYVHYVSKLRRETLAKSRSNSPRRHSVR 738

Query: 803 LALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQC 862
           LA  F LI S++   T+ +  N R+C  CHE  +  S M   EI + DSK  HHF NG+C
Sbjct: 739 LATCFGLI-STETGRTVTVRNNTRICRKCHEFLEKASKMTRREIVVGDSKIFHHFSNGRC 797

Query: 863 SCGDYW 868
           SCG+YW
Sbjct: 798 SCGNYW 803



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 233/484 (48%), Gaps = 75/484 (15%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T+ L  +A  G ++DA ++F++M + + + W+ MI  ++    + E ++L+  MV  G+ 
Sbjct: 64  TRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGVK 123

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            D F +P ++++       E GK +H++VIKL       V NS++++Y+K G    A + 
Sbjct: 124 ADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEKV 183

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------------- 249
           FE M E+D V+WNSMISGY  + +   +  LF +M                         
Sbjct: 184 FEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSP 243

Query: 250 ----------CREEIKLG-VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
                      R  I+ G V+    ++  Y++ G+   A  + K +    I  ++  W  
Sbjct: 244 NMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCI----IQRNIVAWNV 299

Query: 299 MISGFAQNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           +I  +A+N R + A   F++MS   G+ P+ +T+ + + AC    A+  G  IH  A++ 
Sbjct: 300 LIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPAC----AILEGRTIHGYAMRR 355

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           GF   +++  +LI+MY +  +L++AE +FD I +K++ SWNS+IA Y Q G    A ELF
Sbjct: 356 GFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELF 415

Query: 418 IKMQESDVPPNVITWNVLISGYIQN-----GNEDEAVDLFQRMGKN-------------- 458
            K+ +S + P+  T   ++  Y ++     G +  A  +  R G N              
Sbjct: 416 QKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMC 475

Query: 459 ----DKVK-------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
               D  K       ++  SWNS+I  Y   G    ++ +F +M +S   PN  T  S+L
Sbjct: 476 GDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLL 535

Query: 508 PACA 511
            AC+
Sbjct: 536 AACS 539



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/504 (26%), Positives = 238/504 (47%), Gaps = 41/504 (8%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLL 98
           EA+ +   +   G K    TY  ++++    +S+   +K+HA  + L    DV+V   L+
Sbjct: 109 EALQLYCRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLI 168

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
           S+Y K GC  DA +VFE+M ER++ +W++MI  Y   +     + LF  M++ G  PD F
Sbjct: 169 SLYMKLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRF 228

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR-RVRNSVLAVYVKCGKLIWARRFFES 217
                L AC +      GK +H   ++  +      V  S+L +Y K G++ +A R F+ 
Sbjct: 229 STMSALGACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKC 288

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-IKLGVVTF--------------- 261
           + +++ VAWN +I  Y +     +A   F KM  +  ++  V+T                
Sbjct: 289 IIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILEGRTI 348

Query: 262 ----------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ 305
                             LI  Y + GQ   A  +  R+       ++ +W  +I+ + Q
Sbjct: 349 HGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAE----KNLISWNSIIAAYVQ 404

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
           NG+   AL+LF+++    ++P+  TI S + A  +  +L+ G +IH+  VK  +  + ++
Sbjct: 405 NGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTII 464

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
            NSL++MY+ C +LE A + F+ +  KDV SWNS+I  Y   G+   +  LF +M  S V
Sbjct: 465 LNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKV 524

Query: 426 PPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL 485
            PN  T+  L++    +G  DE  + F+ M +   +      +  ++    + G  ++A 
Sbjct: 525 DPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAK 584

Query: 486 GVFRKMQSSCFYPNCVTILSVLPA 509
              R+M    F P      S+L A
Sbjct: 585 RFIREMP---FLPTARIWGSLLNA 605



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 226/452 (50%), Gaps = 44/452 (9%)

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
           +R +   G  + A+++   M       D F W  MI GF   G   +AL L+  M F GV
Sbjct: 67  LRGFADSGLMEDALQLFDEMNK----ADTFVWNVMIKGFTSCGLYFEALQLYCRMVFSGV 122

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
             +  T    I + T + +L  G +IH++ +K+ F  DV V NSLI++Y K      AE+
Sbjct: 123 KADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAEK 182

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN-------------VIT 431
           VF+ + ++D+ SWNSMI+GY       ++  LF +M +    P+             V +
Sbjct: 183 VFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYS 242

Query: 432 WNV-------LISGYIQNGN---EDEAVDLFQRMGKNDK--------VKRNTASWNSLIA 473
            N+        +   I+ G+       +D++ + G+           ++RN  +WN LI 
Sbjct: 243 PNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIG 302

Query: 474 GYQQLGQKNNALGVFRKM-QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
            Y +  +  +A   F+KM + +   P+ +T++++LPACA L      + IHG  +RR   
Sbjct: 303 CYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILEG----RTIHGYAMRRGFL 358

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
             + +  +LID Y + G +  +  IFD ++ K++I+WNS+I  YV +G  ++AL+LF ++
Sbjct: 359 PHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKL 418

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSG 651
               L P+  T  SI+ A++ +  +  G+++   I +  Y    +I   ++++ +Y   G
Sbjct: 419 WDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTII--LNSLVHMYAMCG 476

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
            LE+A +    + ++ D   W +++ A  +HG
Sbjct: 477 DLEDARKCFNHVLLK-DVVSWNSIIMAYAVHG 507



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 161/364 (44%), Gaps = 13/364 (3%)

Query: 35  NGRLNEAITVLDSIATQ-GAKVRRNTYINLLQAC--IDSNSIHLARKLHAFLNLVTEIDV 91
           N R+ +A      ++ Q G +    T INLL AC  ++  +IH       FL       +
Sbjct: 307 NSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILEGRTIHGYAMRRGFLP-----HI 361

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            + T L+ +Y + G L  A  +F+ + E+NL +W+++I AY ++ +    +ELF  +   
Sbjct: 362 VLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDS 421

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            L PD      IL A         G+ +H+ ++K        + NS++ +Y  CG L  A
Sbjct: 422 SLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDA 481

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R+ F  +  KD V+WNS+I  Y   G    +  LF +M   ++     TF  L+ + +  
Sbjct: 482 RKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSIS 541

Query: 272 GQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  D   E  + M+   GI P +  +  M+    + G  S A    +EM F   +P    
Sbjct: 542 GMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIREMPF---LPTARI 598

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
             S ++A  +   + +         KM   D+      L+NMY++    E   R+  +++
Sbjct: 599 WGSLLNASRNHNDITVAEFAAEQIFKMEH-DNTGCYVLLLNMYAEARRWEDVNRIKLLME 657

Query: 391 DKDV 394
            K +
Sbjct: 658 SKGI 661



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 139/295 (47%), Gaps = 9/295 (3%)

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           + G+  +G  ++A+ LF  M K D     T  WN +I G+   G    AL ++ +M  S 
Sbjct: 67  LRGFADSGLMEDALQLFDEMNKAD-----TFVWNVMIKGFTSCGLYFEALQLYCRMVFSG 121

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
              +  T   V+ +   + +  + K+IH  V++    S + V NSLI  Y K G    + 
Sbjct: 122 VKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLISLYMKLGCSWDAE 181

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            +F+ M  +DI++WNS+I GY+       +L LF +M  FG KP+R + +S + A S   
Sbjct: 182 KVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVY 241

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
             ++GK++ C           +   ++++D+Y + G++  A E I    I+ +   W  L
Sbjct: 242 SPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYA-ERIFKCIIQRNIVAWNVL 300

Query: 676 LTACRIHGNIDLAVLAIERLFD---LEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           +     +  +  A L  +++ +   L+P  + +  L+     + G+      +R+
Sbjct: 301 IGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILEGRTIHGYAMRR 355



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 72/143 (50%), Gaps = 2/143 (1%)

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
           P +   +  +A SG +  +  +FD M+  D   WN +I G+   G +  AL L+ +M   
Sbjct: 61  PALTRALRGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMVFS 120

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           G+K +  T+  +I + +    ++ GKK+   + +  + +  +   +++I LY + G   +
Sbjct: 121 GVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKL-RFVSDVYVCNSLISLYMKLGCSWD 179

Query: 656 AMEFIEDMPIEPDSSIWEALLTA 678
           A +  E+MP E D   W ++++ 
Sbjct: 180 AEKVFEEMP-ERDIVSWNSMISG 201


>gi|356568841|ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 207/612 (33%), Positives = 325/612 (53%), Gaps = 48/612 (7%)

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           +I    + G   QA+ L          P   T    I +C    +L+ G+++H   V  G
Sbjct: 53  LIQSLCKGGNLKQAIHLL----CCEPNPTQRTFEHLICSCAQQNSLSDGLDVHRRLVSSG 108

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY-ELF 417
           F  D  +   LINMY +   ++ A +VFD  +++ +Y WN++       G CGK   +L+
Sbjct: 109 FDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVG-CGKELLDLY 167

Query: 418 IKMQESDVPPNVITWNVLISGYI---------QNGNEDEA-----------------VDL 451
           ++M    +P +  T+  ++   +         Q G E  A                 +D+
Sbjct: 168 VQMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDV 227

Query: 452 FQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKM--QSSCFYPNCV 501
           + + G              +N  SW+++IA + +      AL +F+ M  ++    PN V
Sbjct: 228 YAKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSV 287

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           T+++VL ACA L A  + K IHG +LRR L+S LPV+N+LI  Y + G I+  + +FD M
Sbjct: 288 TMVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNM 347

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
            ++D+++WNSLI  Y +HGF   A+ +F+ M   G  P+  +F++++ A S AG+V+ GK
Sbjct: 348 KNRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGK 407

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
            +F S+   Y+I P +EHY+ M+DL GR+ +L+EA++ IEDM  EP  ++W +LL +CRI
Sbjct: 408 ILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGSCRI 467

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H N++LA  A   LF+LEP +     L+  IYA      +A  V KL      +   G  
Sbjct: 468 HCNVELAERASTLLFELEPRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGLQKLPGCS 527

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS--SHSGLC---IEEEEKEEIS 796
           WIEVK  VY+FV+        + +++ L  +   + A+     + +    ++EEEKE I 
Sbjct: 528 WIEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIV 587

Query: 797 GIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHH 856
             HSEKLA+AF LI + +   TIRI KN+R+C  CH   K++S   + EI + D    HH
Sbjct: 588 LGHSEKLAVAFGLINTVKG-ETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHH 646

Query: 857 FKNGQCSCGDYW 868
           FK+G CSCGDYW
Sbjct: 647 FKDGVCSCGDYW 658



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 146/278 (52%), Gaps = 8/278 (2%)

Query: 52  GAKVRRNTYINLLQACIDS----NSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGC 106
           G    R TY  +L+AC+ S    + +   +++HA  L    E ++ V T LL VYAK G 
Sbjct: 174 GIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGS 233

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG--LFPDDFLFPKIL 164
           +  A  VF  M  +N  +WSAMI  +++++   + +ELF LM+ +     P+      +L
Sbjct: 234 VSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVL 293

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
           QAC      E GKL+H  +++ G+  +  V N+++ +Y +CG+++  +R F++M  +D V
Sbjct: 294 QACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMKNRDVV 353

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           +WNS+IS Y   G   +A ++F+ M  +      ++F  ++ + +  G  +    + + M
Sbjct: 354 SWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKILFESM 413

Query: 285 ES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
            S   I P +  + CM+    +  R  +A+ L ++M F
Sbjct: 414 LSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHF 451



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/488 (22%), Positives = 211/488 (43%), Gaps = 67/488 (13%)

Query: 32  LCGNGRLNEAITVL--DSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-- 87
           LC  G L +AI +L  +   TQ       T+ +L+ +C   NS  L+  L     LV+  
Sbjct: 57  LCKGGNLKQAIHLLCCEPNPTQ------RTFEHLICSCAQQNS--LSDGLDVHRRLVSSG 108

Query: 88  -EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
            + D F+ TKL+++Y + G +D AR+VF++ RER +Y W+A+  A +     +E+++L+ 
Sbjct: 109 FDQDPFLATKLINMYYELGSIDRARKVFDETRERTIYVWNALFRALAMVGCGKELLDLYV 168

Query: 147 LMVQDGLFPDDFLFPKILQACG----NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
            M   G+  D F +  +L+AC     +    + GK +H+ +++ G      V  ++L VY
Sbjct: 169 QMNWIGIPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVY 228

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE--------- 253
            K G + +A   F +M  K+ V+W++MI+ + +     +A  LF  M  E          
Sbjct: 229 AKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVT 288

Query: 254 ------------------------IKLG----VVTFNILIRSYNQLGQCDVAMEMVKRME 285
                                   ++ G    +   N LI  Y + G+  +   +   M+
Sbjct: 289 MVNVLQACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMK 348

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
           +     DV +W  +IS +  +G   +A+ +F+ M   G  P+ ++  + + AC+    + 
Sbjct: 349 N----RDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVE 404

Query: 346 MG-MEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAG 403
            G +   S+  K      +     ++++  +   L EA + + DM  +     W S++  
Sbjct: 405 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMHFEPGPTVWGSLLGS 464

Query: 404 ---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDK 460
              +C      +A  L  +++    P N   + +L   Y +     EA  + + +     
Sbjct: 465 CRIHCNVELAERASTLLFELE----PRNAGNYVLLADIYAEAKMWSEAKSVMKLLEARGL 520

Query: 461 VKRNTASW 468
            K    SW
Sbjct: 521 QKLPGCSW 528



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 44/295 (14%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           LI  Y +LG  D A ++        I    + W  +    A  G   + LDL+ +M+++G
Sbjct: 119 LINMYYELGSIDRARKVFDETRERTI----YVWNALFRALAMVGCGKELLDLYVQMNWIG 174

Query: 324 VMPNGVTITSAISACT----DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
           +  +  T T  + AC      +  L  G EIH+  ++ G+  ++ V  +L+++Y+K   +
Sbjct: 175 IPSDRFTYTFVLKACVVSELSVSPLQKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSV 234

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF--IKMQESDVPPNVITW-NV-- 434
             A  VF  +  K+  SW++MIA + +     KA ELF  + ++  D  PN +T  NV  
Sbjct: 235 SYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMLEAHDSVPNSVTMVNVLQ 294

Query: 435 ------------LISGYIQNGNEDEAVDLF----------------QRMGKNDKVKRNTA 466
                       LI GYI     D  + +                 QR+  N K  R+  
Sbjct: 295 ACAGLAALEQGKLIHGYILRRGLDSILPVLNALITMYGRCGEILMGQRVFDNMK-NRDVV 353

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY--LVASNKV 519
           SWNSLI+ Y   G    A+ +F  M      P+ ++ ++VL AC++  LV   K+
Sbjct: 354 SWNSLISIYGMHGFGKKAIQIFENMIHQGSSPSYISFITVLGACSHAGLVEEGKI 408


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 194/573 (33%), Positives = 307/573 (53%), Gaps = 38/573 (6%)

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           S ++ C    A+  G  +H+  +K  +   V +   LI +Y+KC  L  A RV D + ++
Sbjct: 15  SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI-----SGYIQNGNE-- 445
           +V SW +MI+GY Q GY  +A  LF++M  S   PN  T+  ++     S   Q G +  
Sbjct: 75  NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 134

Query: 446 ---------------DEAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKN 482
                             +D++ + GK        +   +R+  S  ++I+GY QLG   
Sbjct: 135 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 194

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
            AL +FR++Q      N VT  SVL A + L A +  +++H  VLR  L   + + NSLI
Sbjct: 195 EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLI 254

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG-LKPNR 601
           D Y+K G++ YSR IFD M  + +I+WN+++ GY  HG    A++LF  MK    +KP+ 
Sbjct: 255 DMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDS 314

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCS-ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
            TFL+++   S  GM D G ++F   + +     P IEHY  ++DL+GR+G++EEA EFI
Sbjct: 315 VTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFI 374

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
           + MP EP ++IW +LL ACR+H N+ +      RL ++E  +     ++  +YA  G+ +
Sbjct: 375 KKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWD 434

Query: 721 DALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS 780
           D   VR+L +E       G+ WIE+   ++TF     S    + +++ ++ +   +    
Sbjct: 435 DVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIKEAG 494

Query: 781 SHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETA 835
               L      +++E+KE+I   HSEKLALAF LI  +     +RI+KN+R+CV CH  A
Sbjct: 495 YVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLI-CTPGGTPVRIIKNLRICVDCHNFA 553

Query: 836 KYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           K++S ++  E+ L D    HH   G CSCGDYW
Sbjct: 554 KFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 221/460 (48%), Gaps = 37/460 (8%)

Query: 48  IATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGC 106
           +  QG +V    Y ++L  CI   +I   +++HA  +    E  V+++T+L+ +Y KC C
Sbjct: 1   MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           L DAR V ++M ERN+ +W+AMI  YS+     E + LF  M+  G  P++F F  +L +
Sbjct: 61  LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C +   F+ G+ +HSLVIK        V +S+L +Y K GK+  ARR F+ + E+D V+ 
Sbjct: 121 CTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSC 180

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA--------- 277
            ++ISGY Q+G ++EA  LF ++ RE ++   VT+  ++ + + L   D           
Sbjct: 181 TAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLR 240

Query: 278 -------------MEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDL 315
                        ++M  +  SL  +  +F         +W  M+ G++++G   +A++L
Sbjct: 241 AKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVEL 300

Query: 316 FKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEIHSLAV--KMGFTDDVLVGNSLINM 372
           FK M     V P+ VT  + +S C+       G+EI    V  K GF  ++     ++++
Sbjct: 301 FKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDL 360

Query: 373 YSKCEELEAA-ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           + +   +E A E +  M  +     W S++ G C+        E   +        N   
Sbjct: 361 FGRAGRVEEAFEFIKKMPFEPTAAIWGSLL-GACRVHQNVHIGEFVARRLLEIESENAGN 419

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
           + +L + Y   G  D+   + + M +   +K    SW  L
Sbjct: 420 YVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIEL 459



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 186/365 (50%), Gaps = 12/365 (3%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           G  +EA+ +   +   G      T+  +L +C  S+   L R++H+ +   + E  +FV 
Sbjct: 90  GYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVG 149

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           + LL +YAK G + +AR VF+ + ER++ + +A+I  Y++     E ++LF  + ++G+ 
Sbjct: 150 SSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMR 209

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            +   +  +L A       + G+ +HS V++  +     ++NS++ +Y KCG L ++RR 
Sbjct: 210 SNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRI 269

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE-EIKLGVVTFNILIRSYNQLGQ 273
           F+SM E+  ++WN+M+ GY + G   EA  LF  M  E ++K   VTF  ++   +  G 
Sbjct: 270 FDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGM 329

Query: 274 CDVAMEMVKRM--ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
            D  +E+   M  +  G  P++  + C++  F + GR  +A +  K+M F    P     
Sbjct: 330 EDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPF---EPTAAIW 386

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDMI 389
            S + AC   + + +G     +A ++   +    GN +I  N+Y+     +    V +++
Sbjct: 387 GSLLGACRVHQNVHIG---EFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELM 443

Query: 390 KDKDV 394
           K+K V
Sbjct: 444 KEKAV 448


>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
 gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
          Length = 744

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 220/714 (30%), Positives = 360/714 (50%), Gaps = 69/714 (9%)

Query: 128 MIGAYSRDQRWREVVELFFLMVQDGLFPDDF-LFPKILQACGNCGDFEAGKLMHSLVIKL 186
           MI   + D  + + + ++   ++ G   ++F  FP +++A G   D   GK +H  ++K 
Sbjct: 9   MIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLLKF 68

Query: 187 GMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF 246
           G      V+NS+L +Y KCG    A   FE M+E+D V+WN+MISG+ Q G+  ++  +F
Sbjct: 69  GFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMF 128

Query: 247 DKMCRE---------------------------------EIKLGVVT----FNILIRSYN 269
            +M +E                                  +K GV +     + LI  Y 
Sbjct: 129 RRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYM 188

Query: 270 QLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
           + G    A  + +R+ ++  +  ++  W  MI G+  N   S AL+LF EM  +G+ P+ 
Sbjct: 189 KCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDS 248

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            T+   +  C+ L  LA+G +IH L + +G  DDV VG +L+ MY KC + E + ++F  
Sbjct: 249 STVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKR 308

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIK-MQESDVPPNVITWNVL------------ 435
            ++ ++  W S++    Q GY  +A E F + M +   P  VI    L            
Sbjct: 309 SQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRG 368

Query: 436 --ISGY-IQNGNEDEA------VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQL 478
             I G+ I+ G + +       VD + + G  +  +        R+  SWN+LI+G+ Q 
Sbjct: 369 MAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQN 428

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
              + AL  FR MQS    PN VT+  +L  C +L      KE+H  +LR   E++  V 
Sbjct: 429 KCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVN 488

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           NSLI  YAK G+I  SRT+F+ +  ++ +TWNS++ G+ +HG        F++MK   +K
Sbjct: 489 NSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIK 548

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           P+ GTF S++ + S +G VD G K F S+ E Y + P +E Y+ M+DL GR+G L +A +
Sbjct: 549 PDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYD 608

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
            I  MP  PD  IW +LL +C+ HGN  LA +    +F+L+   V  + L+  +Y   G 
Sbjct: 609 LIMSMPCSPDDRIWGSLLASCKNHGNTKLAEVVANHIFELDASSVGYRVLLANLYEDSGN 668

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
             +  +VR   ++   +   G  WIEV N ++ FV G +S   S  +Y+ ++++
Sbjct: 669 LNEVFRVRTDIKQMGLKKQPGCSWIEVDNSIHIFVAGDYSHDRSGDIYATIESL 722



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 145/573 (25%), Positives = 255/573 (44%), Gaps = 94/573 (16%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D+FVK  LL +Y KCG   +A ++FE M ER+  +W+ MI  + +   + + + +F  MV
Sbjct: 73  DIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLVMFRRMV 132

Query: 150 QD--GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           ++  G + +       L +C +      G  +H  ++K G+     + ++++ +Y+KCG 
Sbjct: 133 KECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGD 192

Query: 208 LIWARRFFESMDEKDGVA-----WNSMISGYFQIGENDEAHRLFDKM------------- 249
           +  A   FE + + + V      WN MI GY        A  LF +M             
Sbjct: 193 IKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVV 252

Query: 250 -----CREEIKLG-----------------VVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
                C + + L                  V     L+  Y + G  + ++++ KR ++ 
Sbjct: 253 VVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQN- 311

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
               ++  W  ++   AQNG  ++AL+ F E       P+ V + +A+ AC+ L     G
Sbjct: 312 ---HNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRG 368

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
           M IH  A+KMGF  DV VG +L++ Y KC ++E A++VF  +  +D+ SWN++I+G+ Q 
Sbjct: 369 MAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQN 428

Query: 408 GYCGKAYELFIKMQESDVPPNVIT---------------------------W-------- 432
               +A + F  MQ   + PN +T                           W        
Sbjct: 429 KCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETNALVN 488

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           N LIS Y + G+   +  +F+++       RN  +WNS++ G+   G+ +     F KM+
Sbjct: 489 NSLISAYAKCGDIHSSRTVFEKL-----PVRNEVTWNSILLGFGMHGRTDEMFATFEKMK 543

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKV----KEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
            +   P+  T  S+L +C++   S KV    K  +  +   +LE  +     ++D   ++
Sbjct: 544 EANIKPDHGTFTSLLSSCSH---SGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRA 600

Query: 549 GNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
           GN+  +  +   M  S D   W SL+     HG
Sbjct: 601 GNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHG 633



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 138/569 (24%), Positives = 253/569 (44%), Gaps = 51/569 (8%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQ--GAKVRRNTYINLLQACIDSNSIHLARKLHAFL 83
           +T +   C +G   +++ +   +  +  G+   R   +  L +C     +    ++H FL
Sbjct: 109 NTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFL 168

Query: 84  -NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE-----RNLYTWSAMIGAYSRDQR 137
                + D F+ + L+ +Y KCG + +A  VFE +R+     RN+  W+ MI  Y  ++ 
Sbjct: 169 VKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNEC 228

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
               +ELF  M++ G+ PD      +L  C    D   GK +H L++ LG+    RV  +
Sbjct: 229 LSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTA 288

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE----- 252
           ++ +Y KCG    + + F+     + V W S++    Q G  +EA   F +   +     
Sbjct: 289 LMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPD 348

Query: 253 --------------------------EIKLG----VVTFNILIRSYNQLGQCDVAMEMVK 282
                                      IK+G    V     L+  Y + G  + A ++  
Sbjct: 349 PVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFY 408

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
            +     T D+ +W  +ISGFAQN    +AL  F++M    + PN VT+   +S CT L 
Sbjct: 409 GLS----TRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLS 464

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
            + +  E+H   ++  F  + LV NSLI+ Y+KC ++ ++  VF+ +  ++  +WNS++ 
Sbjct: 465 VMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILL 524

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
           G+   G   + +  F KM+E+++ P+  T+  L+S    +G  D     F  M ++  ++
Sbjct: 525 GFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLE 584

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
                +  ++    + G  N A  +   M  S   P+     S+L +C     + K+ E+
Sbjct: 585 PRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCS---PDDRIWGSLLASCKNH-GNTKLAEV 640

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
               +     SS+     L + Y  SGN+
Sbjct: 641 VANHIFELDASSVGYRVLLANLYEDSGNL 669


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 240/878 (27%), Positives = 409/878 (46%), Gaps = 94/878 (10%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACID---SNSIHLARKLHAFLNLVTEI-DV 91
           GR   A  +L  +  +G  +      +L+ AC        I     +HA  +    + +V
Sbjct: 20  GRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNV 79

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           ++ T LL +Y   G + DA+ +F +M ERN+ +W+A++ A S +    E +  +  M +D
Sbjct: 80  YIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRD 139

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+  +   F  ++  CG+  +   G  + S VI  G+     V NS++ ++   G++  A
Sbjct: 140 GVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDA 199

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---------------------- 249
            + F+ M+E D ++WN+MIS Y   G   +   +F  M                      
Sbjct: 200 EKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASS 259

Query: 250 -------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                         R  +   V   N L+  Y+  G+   A  +   M       D+ +W
Sbjct: 260 DHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSR----RDLISW 315

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             MIS + QN  ++ AL    ++      PN +T +SA+ AC+   AL  G  +H++ ++
Sbjct: 316 NTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQ 375

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
           +    ++LVGNSLI MY KC  +E AE+VF  +   D+ S+N +I GY       KA ++
Sbjct: 376 LSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQV 435

Query: 417 FIKMQESDVPPNVITW------------------------------------NVLISGYI 440
           F  M+ + + PN IT                                     N LI+ Y 
Sbjct: 436 FSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYA 495

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           + GN + + ++F     N    +N  SWN++IA   QLG    AL +F  MQ +    + 
Sbjct: 496 KCGNLESSTNIF-----NSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDR 550

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           V +   L +CA L +  +  ++HG  ++  L+S   V+N+ +D Y K G +     +   
Sbjct: 551 VCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPD 610

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
            + +    WN+LI GY  +G++  A + F QM + G KP+  TF++++ A S AG+VD G
Sbjct: 611 QAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKG 670

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
              + S+   + + P I+H   ++DL GR G+  EA +FIE+MP+ P+  IW +LL++ R
Sbjct: 671 IDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSR 730

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
            H N+++     ++L +L+P D     L+  +YA   +  D  K+R   +          
Sbjct: 731 THKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPAC 790

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEI 795
            W+++KN V TF  G     +++ +Y+ L  +          A +S +    +EE+KE+ 
Sbjct: 791 SWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDTDEEQKEQN 850

Query: 796 SGIHSEKLALAFALI----GSSQAPHTIRIVKNIRMCV 829
              HSEKLALA+ LI    GS+Q    +    +I  C+
Sbjct: 851 LWNHSEKLALAYGLIVVPEGSTQGS-AVNTSSSIDACL 887



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 192/414 (46%), Gaps = 48/414 (11%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL---KALAM 346
           TP   TW   +SG  + GR   A ++ + M   GV  +G  + S ++AC      + +A 
Sbjct: 5   TPS--TWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIAC 62

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G  IH+L  + G   +V +G +L+++Y     +  A+R+F  + +++V SW +++     
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSS 122

Query: 407 AGYCGKAYELFIKMQESDVPPNV---------------------ITWNVLISGYIQN--- 442
            GY  +A   + +M+   VP N                      +   V++SG +QN   
Sbjct: 123 NGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSG-LQNQVS 181

Query: 443 ------------GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
                       G   +A  LF RM ++D     T SWN++I+ Y   G  +    VF  
Sbjct: 182 VANSLITMFGNLGRVHDAEKLFDRMEEHD-----TISWNAMISMYSHQGICSKCFLVFSD 236

Query: 491 MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGN 550
           M+     P+  T+ S++  CA     +    IH   LR SL+SS+ V+N+L++ Y+ +G 
Sbjct: 237 MRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGK 296

Query: 551 IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA 610
           +  +  +F  MS +D+I+WN++I  YV +     AL    Q+      PN  TF S + A
Sbjct: 297 LSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGA 356

Query: 611 HSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
            S  G +  GK V   + +      ++   S +I +YG+   +E+A +  + MP
Sbjct: 357 CSSPGALIDGKMVHAIVLQLSLQRNLLVGNS-LITMYGKCNSMEDAEKVFQSMP 409



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/219 (20%), Positives = 100/219 (45%), Gaps = 7/219 (3%)

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK-- 520
           R  ++W + ++G  + G+   A  + R M+      +   + S++ AC        +   
Sbjct: 4   RTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACG 63

Query: 521 -EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
             IH    R  L  ++ +  +L+  Y   G +  ++ +F  M  +++++W +L+     +
Sbjct: 64  AAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSN 123

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSII-LAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           G+   AL  + QM+  G+  N   F +++ L  SL   V  G +V   +     +   + 
Sbjct: 124 GYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVP-GLQVASQVI-VSGLQNQVS 181

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
             +++I ++G  G++ +A +  + M  E D+  W A+++
Sbjct: 182 VANSLITMFGNLGRVHDAEKLFDRME-EHDTISWNAMIS 219


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 216/731 (29%), Positives = 363/731 (49%), Gaps = 75/731 (10%)

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVA----WNSMISGYFQIGENDEAHRLFDKMCREE 253
           ++A  V+ G+ + A   +  M+E+  VA      S+++   ++   +E  RL + +    
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
            +  +     L++ Y + G  D A  + + ME      D+F W+ +I+ +A+ GR   A+
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGME----IKDLFAWSSIIAAYARAGRGEMAV 116

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
            L++ M   GV PN VT   A+  C  +  LA G  IH   +      D ++ +SL+NMY
Sbjct: 117 VLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMY 176

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD-VPP----- 427
            KC+E+  A +VF+ +K ++V S+ +MI+ Y QAG   +A ELF +M + + + P     
Sbjct: 177 LKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTF 236

Query: 428 ------------------------------NVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
                                         NV+  N L++ Y + G+  EA  +F  M  
Sbjct: 237 ATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSM-- 294

Query: 458 NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASN 517
                RN  SW S+IA Y Q G    AL +F++M      P+ V+  S L ACA L A +
Sbjct: 295 ---TARNVISWTSMIAAYAQHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALD 348

Query: 518 KVKEIHGCVLRRSLESSLPVM-NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
           + +EIH  V+  +L S  P M  SL+  YA+ G++  +R +F+ M ++D  + N++I  +
Sbjct: 349 EGREIHHRVVEANLAS--PQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAF 406

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
             HG    AL ++ +M+  G+  +  TF+S+++A S   +V   +    S+   + ++P+
Sbjct: 407 TQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPL 466

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF 696
           +EHY  M+D+ GRSG+L +A E +E MP + D+  W  LL+ C+ HG++D    A  ++F
Sbjct: 467 VEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVF 526

Query: 697 DLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG 756
           +L P + L    +  +YA   + +DA +VRK   E          +IE+ N ++ F +GG
Sbjct: 527 ELAPAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGG 586

Query: 757 WSESYS-----------DLLYSWLQN------VPENVTARSSHSGLCIEEEEKEEISGIH 799
             E               LL   L+       VP+         G+  EEE++  +   H
Sbjct: 587 RDEQQEGHDGRTMERVRSLLVELLEPMKQAGYVPDTREVYLEQQGVTSEEEKQRSLC-FH 645

Query: 800 SEKLALAFALIGSSQAPHT--IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF 857
           SE+LA+A+ LI +     +  +R+V + R+C  CH   K +S +    IF+ D    HHF
Sbjct: 646 SERLAIAYGLIAAKDPDDSRPLRVVNSHRVCSGCHSAIKLLSDITEKRIFVRDGSRFHHF 705

Query: 858 KNGQCSCGDYW 868
           + G CSCGD+W
Sbjct: 706 EKGACSCGDHW 716



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 232/437 (53%), Gaps = 38/437 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
            GR  +A+ +   +  +G    +    +L+ AC    ++   R+LH  L +     D+ +
Sbjct: 8   EGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPL 67

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           +T LL +YAKCG LDDA+ VFE M  ++L+ WS++I AY+R  R    V L+  M+ +G+
Sbjct: 68  ETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYRRMIAEGV 127

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+   F   L  C +      G+ +H  ++   +     +++S+L +Y+KC +++ AR+
Sbjct: 128 EPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARK 187

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR-EEIKLGVVTFNILIRSYNQLG 272
            FE M  ++  ++ +MIS Y Q GE+ EA  LF +M + E I+    TF  ++ +   LG
Sbjct: 188 VFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLG 247

Query: 273 QCDVAMEMVKRMESLGI------------------TP-------------DVFTWTCMIS 301
             +   ++ + + S G                   +P             +V +WT MI+
Sbjct: 248 NLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIA 307

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
            +AQ+G   +AL+LFK M    V P+GV+ +SA++AC  L AL  G EIH   V+     
Sbjct: 308 AYAQHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEANLAS 364

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
             +   SL++MY++C  L+ A RVF+ +K +D +S N+MIA + Q G   +A  ++ KM+
Sbjct: 365 PQM-ETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKME 423

Query: 422 ESDVPPNVITW-NVLIS 437
           +  +P + IT+ +VL++
Sbjct: 424 QEGIPADGITFVSVLVA 440



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 174/408 (42%), Gaps = 41/408 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           +G   EA+ +   +  + + V   ++ + L AC    ++   R++H  +         ++
Sbjct: 312 HGNPQEALNLFKRMDVEPSGV---SFSSALNACALLGALDEGREIHHRVVEANLASPQME 368

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T LLS+YA+CG LDDAR VF  M+ R+ ++ +AMI A+++  R ++ + ++  M Q+G+ 
Sbjct: 369 TSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRKMEQEGIP 428

Query: 155 PDDFLFPKILQAC------GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
            D   F  +L AC       +C DF     + SLV+  G+  +      ++ V  + G+L
Sbjct: 429 ADGITFVSVLVACSHTSLVADCRDF-----LQSLVMDHGVVPLVEHYLCMVDVLGRSGRL 483

Query: 209 IWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
             A    E+M  + D VAW +++SG  + G+ D   R   K+  E      + +  L   
Sbjct: 484 GDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVF-ELAPAETLPYVFLSNM 542

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG----FAQNGRTSQA----------- 312
           Y    + D A  + K ME  G+T  V      I      F   GR  Q            
Sbjct: 543 YAAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERV 602

Query: 313 ----LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS--LAVKMGFTDDVLVG 366
               ++L + M   G +P+   +       T  +     +  HS  LA+  G        
Sbjct: 603 RSLLVELLEPMKQAGYVPDTREVYLEQQGVTSEEEKQRSLCFHSERLAIAYGLIAAKDPD 662

Query: 367 NS----LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           +S    ++N +  C    +A ++   I +K ++  +     + + G C
Sbjct: 663 DSRPLRVVNSHRVCSGCHSAIKLLSDITEKRIFVRDGSRFHHFEKGAC 710


>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
          Length = 649

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 199/585 (34%), Positives = 320/585 (54%), Gaps = 49/585 (8%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA-LAMGM 348
           TP V  W  +ISG  +  R  +A   F +M+  G  P  VT  S +SAC      + +GM
Sbjct: 108 TPVV--WNALISGHNRCRRFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGM 165

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           ++H   V  G   D+ V N+L++MY++C ++E+A ++FD ++ +                
Sbjct: 166 QVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVR---------------- 209

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                              +V++W  L+SG  + G  DEA DLF RM +     R+T SW
Sbjct: 210 -------------------SVVSWTSLLSGLTRLGRVDEARDLFGRMPE-----RDTVSW 245

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
            ++I GY Q  +   AL +FR+MQ S    +  T++SV+ ACA L A    + +   + R
Sbjct: 246 TAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSR 305

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
           + ++    V N+LID Y+K G+I  +  +F  M  +D  TW ++I G  ++G+   A+++
Sbjct: 306 QGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEM 365

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F +M      P+  TF+ ++ A + AG+VD G++ F S+ E Y I P + HY  +IDL+G
Sbjct: 366 FHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFG 425

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+GK+ EA++ I+ MP+ P+S+IW  LL ACR+HGN ++  L  ERL  ++P +  +  L
Sbjct: 426 RAGKITEALDAIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTL 485

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  IYA C + ED  ++R    E   +   G   IE+  +++ FV G  S   S  +Y  
Sbjct: 486 LSNIYAKCNRWEDVRRLRHTIMEKGIKKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCK 545

Query: 769 LQNVPENVT-----ARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
           L+++  ++         +   + + EEEK+++   HSEKLA+AFAL+ SS+    IRIVK
Sbjct: 546 LESIINDLNNVGYFPDVTEVFVEVAEEEKQKVLFWHSEKLAIAFALL-SSEPNTVIRIVK 604

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+RMC+ CH   K +S ++  E+ + D    HHF++G CSC DYW
Sbjct: 605 NLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 649



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 208/473 (43%), Gaps = 44/473 (9%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL 98
           +A+     +  +GA     T+  LL+A    +S    R +HA  +      +  V T L+
Sbjct: 26  DAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHVATSLV 85

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
           + YA  G    AR +  +        W+A+I  ++R +R+ E    F  M + G  P   
Sbjct: 86  TAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGAAPTPV 145

Query: 159 LFPKILQACGN-CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
            +  +L ACG   GD   G  +H  V+  G+    RV N+++ +Y +C  +  A + F+ 
Sbjct: 146 TYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDG 205

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
           M  +  V+W S++SG  ++G  DEA  LF +M   +     V++  +I  Y Q  +   A
Sbjct: 206 MQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERD----TVSWTAMIDGYVQAARFREA 261

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
           +EM + M+   ++ D F                                   T+ S I+A
Sbjct: 262 LEMFREMQCSNVSADEF-----------------------------------TMVSVITA 286

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C  L AL MG  +     + G   D  VGN+LI+MYSKC  +E A  VF  +  +D ++W
Sbjct: 287 CAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTW 346

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
            ++I G    GY  +A E+F +M      P+ +T+  +++     G  D+  + F  M +
Sbjct: 347 TAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRE 406

Query: 458 NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
              +  N   +  +I  + + G+   AL    +M  +   PN     ++L AC
Sbjct: 407 TYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMT---PNSTIWGTLLAAC 456



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 171/392 (43%), Gaps = 38/392 (9%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQAC-IDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           R  EA      +A  GA     TY+++L AC   +  + L  ++H   +      D+ V+
Sbjct: 124 RFGEACCSFVDMARAGAAPTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVE 183

Query: 95  TKLLSVYAKC-------------------------------GCLDDAREVFEDMRERNLY 123
             L+ +YA+C                               G +D+AR++F  M ER+  
Sbjct: 184 NALVDMYAECADMESAWKLFDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTV 243

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
           +W+AMI  Y +  R+RE +E+F  M    +  D+F    ++ AC   G  E G+ +   +
Sbjct: 244 SWTAMIDGYVQAARFREALEMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYM 303

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
            + G+     V N+++ +Y KCG +  A   F+ M  +D   W ++I G    G  +EA 
Sbjct: 304 SRQGIKMDAFVGNALIDMYSKCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAI 363

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISG 302
            +F +M         VTF  ++ +    G  D   E    M E+  I P+V  + C+I  
Sbjct: 364 EMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDL 423

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           F + G+ ++ALD   +M      PN     + ++AC       +G  +    ++M   ++
Sbjct: 424 FGRAGKITEALDAIDQMPMT---PNSTIWGTLLAACRVHGNSEIGELVTERLLQMD-PEN 479

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
             V   L N+Y+KC   E   R+   I +K +
Sbjct: 480 STVYTLLSNIYAKCNRWEDVRRLRHTIMEKGI 511



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 94/212 (44%), Gaps = 3/212 (1%)

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
           +  + +A+  + +M +    P+  T   +L A A   ++  V+ +H  V++  +  +  V
Sbjct: 21  VAAREDAVAGYARMLARGAMPDAYTFPPLLKAVARGSSAAPVRAVHAHVVKFGMGRNAHV 80

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
             SL+  YA  G+   +R +         + WN+LI G+     +  A   F  M   G 
Sbjct: 81  ATSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRCRRFGEACCSFVDMARAGA 140

Query: 598 KPNRGTFLSIILA-HSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
            P   T++S++ A     G V LG +V   +     ++P +   +A++D+Y     +E A
Sbjct: 141 APTPVTYVSVLSACGKGTGDVLLGMQVHGRVVGS-GVLPDLRVENALVDMYAECADMESA 199

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
            +  + M +    S W +LL+     G +D A
Sbjct: 200 WKLFDGMQVRSVVS-WTSLLSGLTRLGRVDEA 230


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 223/776 (28%), Positives = 363/776 (46%), Gaps = 134/776 (17%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M+++G      ++  +L  C   G     K +H  ++K G      V  S++ VY++C  
Sbjct: 69  MLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRC-- 126

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
                                        G + +A  LFD+M  +               
Sbjct: 127 -----------------------------GNSQDARNLFDEMPEK--------------- 142

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
                                   +V TWT +I+G+  N +   AL++F EM  +G  P+
Sbjct: 143 ------------------------NVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPS 178

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             T+   +SAC     + +G ++H   +K G      +GNSL  +Y+K   LE+  R F 
Sbjct: 179 DYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFK 238

Query: 388 MIKDKDVYSWNSMIAGYCQ-AGYCGKAYELFIKMQESDVPPNVITWNVLISG-------- 438
            I DK+V +W +MI+   +   Y      LF+ M + +V PN  T   ++S         
Sbjct: 239 RIPDKNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMN 298

Query: 439 ---------------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                                      Y++ G  +EA+ LF+ M  N  +     +WN++
Sbjct: 299 LGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVI-----TWNAM 353

Query: 472 IAGYQQL-----------GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
           I+G+ Q+            +   AL +FR +  S   P+  T  S+L  C+ ++A  + +
Sbjct: 354 ISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGE 413

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
           +IH   ++    S + V ++L++ Y K G I Y+   F  M ++ ++TW S+I GY  HG
Sbjct: 414 QIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHG 473

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
             H A+ LF+ M   G KPN  TF+S++ A S AG+V+   + F  +   Y I P+++HY
Sbjct: 474 RPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHY 533

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
             MID++ R G+L++A  FI+    EP+ +IW +L+  CR HGN++LA  A +RL +L+P
Sbjct: 534 GCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKP 593

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
             V    L+L +Y   G+  D  +VRKL +         + WI +++ VY F     S  
Sbjct: 594 KVVETYVLLLNMYISTGRWRDVARVRKLSKHEDLGILRDRSWITIRDKVYFFKADDRSHP 653

Query: 761 YSDLLYSWLQNVPENVTA----RSSHSGLCIEEEEKEEISGI---HSEKLALAFALIGSS 813
            S  LY  L+ + E   A       ++ L   EE+ +  +G    HSE+LA+A  L+   
Sbjct: 654 QSTELYQLLETLLEKAKAIGYEPYQNTELYDSEEDGKPAAGSLKHHSERLAVALGLL--- 710

Query: 814 QAPH--TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
           +AP   T+RI KNI MC  CH + K+ S++ + EI + DSK LH FK+G+CSCGD+
Sbjct: 711 KAPPGVTVRITKNITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 156/535 (29%), Positives = 260/535 (48%), Gaps = 72/535 (13%)

Query: 35  NGRLNEAITVLDS-----IATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTE 88
           NGRL      LD+     +  +G  V+   Y+ LL  CI++ S+  A+ LH  +    T 
Sbjct: 51  NGRLEAPPRPLDAQEAMAMLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTI 110

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
           +D+FV T L++VY +CG   DAR +F++M E+N+ TW+A+I  Y+ + +    +E+F  M
Sbjct: 111 VDIFVATSLVNVYMRCGNSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEM 170

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           ++ G +P D+    +L AC    + + GK +H   IK G + +  + NS+  +Y K G L
Sbjct: 171 LKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNL 230

Query: 209 IWARRFFESMDEKDGVAWNSMISG------YFQIGENDEAHRLFDKMCREEI-------- 254
               R F+ + +K+ + W +MIS       Y ++G N     LF  M + E+        
Sbjct: 231 ESGIRAFKRIPDKNVITWTTMISACAEDENYTELGLN-----LFLDMLKGEVMPNEFTLT 285

Query: 255 -----------------------KLGVVTFNILIRS-----YNQLGQCDVAMEMVKRMES 286
                                  K+G  T N+ +++     Y + G+ + AM + + ME 
Sbjct: 286 SVMSLCGTSLDMNLGKQVQGFCFKIGCAT-NLPVKNSTMYLYLRKGETEEAMRLFEEMED 344

Query: 287 LGITPDVFTWTCMISGFAQ-----------NGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
                 V TW  MISGFAQ             R  QAL +F+++    + P+  T +S +
Sbjct: 345 ----NSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSIL 400

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
           S C+ + AL  G +IH+  +K GF  DV+V ++L+NMY+KC  +E A + F  +  + + 
Sbjct: 401 SVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLV 460

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           +W SMI+GY Q G    A +LF  M  +   PN IT+  L+S     G  +EA+  F  M
Sbjct: 461 TWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMM 520

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                ++     +  +I  + +LG+ ++A    ++     F PN     S++  C
Sbjct: 521 QNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKR---KGFEPNEAIWSSLVAGC 572


>gi|297847764|ref|XP_002891763.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337605|gb|EFH68022.1| hypothetical protein ARALYDRAFT_314676 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 828

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 226/716 (31%), Positives = 363/716 (50%), Gaps = 28/716 (3%)

Query: 44  VLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYA 102
           V+  I  +G   R N  +        SN   + +K  +FL    T   +F     +S  A
Sbjct: 2   VMRPITNKGLIYRHNLCLRCNSTLAVSNHEPITQKTRSFLETTTTSTAIFQCNSQISKLA 61

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
           + G L +A  +F  M  R++ +W+AMI AY+ + +  +  ++F  M        + +   
Sbjct: 62  RNGNLQEAEAIFRQMSHRSIVSWNAMISAYAENGKMSKAWQVFDEMPVRATTSYNAMITA 121

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK- 221
           +++    C   +A +L   +  K  +S       +++  +V+ G+   A   +     K 
Sbjct: 122 MIK--NKCDLGKAYELFCDIPEKNAVSYA-----TMITGFVRAGRFDEAECLYAETPVKF 174

Query: 222 -DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM 280
            D VA N ++SGY ++G+ +EA R+F+ M  +E    VV+++ ++  Y ++G+   A  +
Sbjct: 175 RDPVASNVLLSGYLRVGKWNEAVRVFEGMAVKE----VVSYSSMVDGYCKMGRILDARSL 230

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACT 339
             RM       +V TWT MI G+ + G       LF  M   G V  N  T+     AC 
Sbjct: 231 FDRMPER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVRVNSNTLAVMFRACR 286

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           D      G +IH L  +M    D+ +GNSLI+MYSK   +  A+ VF ++K KD  SWNS
Sbjct: 287 DFFRYREGSQIHGLLSRMPLEFDLFLGNSLISMYSKLGYMGEAKAVFGVMKYKDSVSWNS 346

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           +I G  Q     +AYELF KM   D+    ++W  +I G+   G   + V+LF  M + D
Sbjct: 347 LITGLVQREQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMMPEKD 402

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
            +     +W ++I+ +   G    AL  F KM      PN  T  SVL A A L    + 
Sbjct: 403 DI-----TWTAMISAFVSNGYYEEALCWFHKMLRKQVCPNSYTFSSVLSATASLADLIEG 457

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
            +IHG V++ ++ + L V NSL+  Y K GN   +  IF  +S  +I+++N++I G+  +
Sbjct: 458 LQIHGRVVKMNMANDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGFSYN 517

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
           GF   A+ LF  ++S G +PN  TFL+++ A    G VDLG K F S+   Y I P  +H
Sbjct: 518 GFGKEAVKLFSMLESTGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKFSYGIEPGPDH 577

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
           Y+ M+DL+GRSG L+EA   I  MP EP S +W +LL+A + H  +DLA LA ++L +LE
Sbjct: 578 YACMVDLFGRSGLLDEAYNLISTMPCEPHSGVWGSLLSASKTHLRVDLAELAAKKLIELE 637

Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
           P       ++ Q+Y++ GK  D  ++  +++    +   G  WI +K  V+ F+ G
Sbjct: 638 PDSATPYVVLSQLYSMVGKNSDCDRIMNIKKSKRIKKDPGSSWIILKGQVHNFLAG 693


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 236/796 (29%), Positives = 399/796 (50%), Gaps = 86/796 (10%)

Query: 153 LFP-DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           +FP D   + K++Q     G    GKL H+ +IK   +    + N+ L +Y K G++  A
Sbjct: 4   VFPLDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNA 63

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------- 261
           ++ F+ M E+  +++N +ISGY  +G   +A  LF +     +KL   ++          
Sbjct: 64  QKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQI 123

Query: 262 -------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                                    N+LI  Y +  + D A  + +  + L    D  +W
Sbjct: 124 KDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDEL----DNVSW 179

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC-TDLKAL-AMGMEIHSLA 354
             +I+G+A+ G   + L L  +M   G+  N  T+ SA+ +C  +L  + + G  +H   
Sbjct: 180 NSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYT 239

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK-- 412
           VK G   D++VG +L++MY+K   L  A ++F    +++V  +N+MIAG+ Q     K  
Sbjct: 240 VKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKEC 299

Query: 413 AYE---LFIKMQESDVPPNVITWNVLIS--GYIQ---------------NGNEDE----- 447
           AYE   LF +MQ   + P+  T++ +I    +I+               N   DE     
Sbjct: 300 AYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGST 359

Query: 448 AVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
            ++L+  +G         N   K +  SW ++IAGY Q GQ  +AL +F ++ +S   P+
Sbjct: 360 LIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPD 419

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
              I ++L ACA + A    +++HG  ++  + +   V NS I  YAKSGN+  ++  F+
Sbjct: 420 EFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFE 479

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
            + + D+++W+ +IC    HG    A++LF+ MKS+G+ PN+ TFL ++ A S  G+V+ 
Sbjct: 480 EIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEE 539

Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
           G + + S+ + Y +   ++H + ++DL  R+G+L +A  FI +        +W  LL+ C
Sbjct: 540 GLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGC 599

Query: 680 RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFG 739
           RI+ +I       E+L +L+P +     L+  IY   G    A K+R+L ++   R   G
Sbjct: 600 RIYKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPG 659

Query: 740 QCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA----RSSHSGLCIEEEEKEEI 795
           Q WIEV N V++FV G  S   S ++Y  L+ + E              + I  +E +  
Sbjct: 660 QSWIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYIDQKIQNVTISTKEVKGT 719

Query: 796 SGI--HSEKLALAFALIG-SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
            G+  HSEKLA++F ++     AP  ++++KN+R+C  CH T K +S++   EI L DS 
Sbjct: 720 LGVNHHSEKLAVSFGIVSLPPSAP--VKVMKNLRVCHDCHATMKLISVVEKREIILRDSL 777

Query: 853 CLHHFKNGQCSCGDYW 868
             HHFK G CSC DYW
Sbjct: 778 RFHHFKEGSCSCNDYW 793



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 134/485 (27%), Positives = 214/485 (44%), Gaps = 78/485 (16%)

Query: 101 YAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLF 160
           Y+K G + +A+++F+ M ER++ +++ +I  Y     + + + LF       L  D F +
Sbjct: 54  YSKWGEMGNAQKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSY 113

Query: 161 PKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE 220
             +L ACG   DF  GK++H L I  G+     + N ++ +Y KC ++  AR  FES DE
Sbjct: 114 AGVLSACGQIKDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDE 173

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS------------- 267
            D V+WNS+I+GY ++G  +E  +L  KM    ++L   T    ++S             
Sbjct: 174 LDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGK 233

Query: 268 ------YNQLGQCDVA-----MEMVKRMESLG-------ITP--DVFTWTCMISGFAQNG 307
                   Q    D+      ++M  +   LG        +P  +V  +  MI+GF Q  
Sbjct: 234 TLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTE 293

Query: 308 RTS-----QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
                   +AL LF +M   G+ P+  T +S I  C  ++A   G +IH+   K     D
Sbjct: 294 DIDKECAYEALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSD 353

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
             +G++LI +YS     E   + F+     D+ SW +MIAGY Q G    A  LF ++  
Sbjct: 354 EFIGSTLIELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLA 413

Query: 423 SDVPPN-----------------------------------VITWNVLISGYIQNGNEDE 447
           S   P+                                    I  N  IS Y ++GN D 
Sbjct: 414 SGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDS 473

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           A   F+ +   D V     SW+ +I    Q G   +A+ +F  M+S   +PN +T L VL
Sbjct: 474 AKITFEEIKNPDVV-----SWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVL 528

Query: 508 PACAY 512
            AC++
Sbjct: 529 TACSH 533



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/360 (22%), Positives = 169/360 (46%), Gaps = 12/360 (3%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLL 98
           EA+ +   +  QG K    T+ ++++ C    +    +++HA +     + D F+ + L+
Sbjct: 302 EALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLI 361

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +Y+  G  +D  + F    + ++ +W+ MI  Y+++ ++   + LF+ ++  G  PD+F
Sbjct: 362 ELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEF 421

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
           +   +L AC +     +G+ +H   +K G+  +  V+NS +++Y K G L  A+  FE +
Sbjct: 422 IITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEI 481

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
              D V+W+ MI    Q G   +A  LF+ M    I    +TF  ++ + +  G  +  +
Sbjct: 482 KNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGL 541

Query: 279 EMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
              + M+    +  +V   TC++   ++ GR   A +      F G  P  V   + +S 
Sbjct: 542 RYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGF-GDHP--VMWRTLLSG 598

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDD---VLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           C   K +  G  +    +++   +    VL    L N+Y+       A ++ +++KD+ +
Sbjct: 599 CRIYKDIVTGKHVAEKLIELDPQESSSYVL----LYNIYTDAGIDLPATKIRELMKDRGI 654



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 95/202 (47%), Gaps = 5/202 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF-- 92
           NG+   A+ +   +   G K        +L AC D  +     ++H +  + T I     
Sbjct: 398 NGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYA-VKTGIGTLAI 456

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V+   +S+YAK G LD A+  FE+++  ++ +WS MI + ++    ++ + LF LM   G
Sbjct: 457 VQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYG 516

Query: 153 LFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           + P+   F  +L AC + G  E G +   S+     M    +    ++ +  + G+L+ A
Sbjct: 517 IHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDA 576

Query: 212 RRFFESMDEKD-GVAWNSMISG 232
           + F  +    D  V W +++SG
Sbjct: 577 KNFILNSGFGDHPVMWRTLLSG 598


>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
          Length = 1008

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 230/784 (29%), Positives = 381/784 (48%), Gaps = 90/784 (11%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
            NG   E   VL  I   G K   +T+ +++  C     + + + +H F+       D F+
Sbjct: 234  NGFDKEVFEVLRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFL 293

Query: 94   KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
               L+S+YA  G L  AR++F+   E+N+  W++MI AY+++Q+  E  ++F  M++  +
Sbjct: 294  TPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANM 353

Query: 154  FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             P+   F  I+  C N  +F  GK +H+ V+K  +     V  ++L++Y K G L  A  
Sbjct: 354  QPNVVTFVSIIPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADF 413

Query: 214  FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC----------------------- 250
             F  M  ++ ++WNSMISGY   G N       D  C                       
Sbjct: 414  IFYQMPRRNLLSWNSMISGY---GHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSK 470

Query: 251  ---------------REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                           R+E    +   N L+  Y+  G+   + ++ ++M       +  +
Sbjct: 471  LEAILLGKAAHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMP----LRNAIS 526

Query: 296  WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
            W  +ISG   NG T +A+ L  +M    +  + VT+ S I  C   + L  GM +H  A+
Sbjct: 527  WNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAI 586

Query: 356  KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY--------CQA 407
            K GF  DV + N+LI+MY  C ++ A + +F+++  + + SWN++I GY          A
Sbjct: 587  KTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMA 646

Query: 408  GYC--------------------------GKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
             +C                          GK+   F       V   +IT   LIS Y +
Sbjct: 647  SFCQMIREGQKPNYVTLLNLLPSCRTLLQGKSIHAFAVRTGVIVETPIIT--SLISMYAR 704

Query: 442  NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
              N +  + LF+  GK D      A WN++++ Y Q      ++  F ++  +   P+ +
Sbjct: 705  FENINSFIFLFEMGGKED-----IALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYI 759

Query: 502  TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
            T LS++ AC  L + N    +   V+++  +  + + N+LID +A+ GNI  ++ IF+G+
Sbjct: 760  TFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGL 819

Query: 562  SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
            SSKD ++W+++I GY LHG   AAL L  QM+  G+KP+  T+ S++ A S  G +D G 
Sbjct: 820  SSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGW 879

Query: 622  KVFCSITECYQIIP-MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
             +F S+ E  + +P  +EHY+ M+DL GR+G+L EA +F+E +P +P  S+ E+LL AC 
Sbjct: 880  MIFNSMVE--EGVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGACI 937

Query: 681  IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
            IHGN+ L       LF+L+P +     ++  IYA  G+  DA +VR    E   R   G 
Sbjct: 938  IHGNVKLGEKISSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGF 997

Query: 741  CWIE 744
              +E
Sbjct: 998  SLVE 1001



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 196/741 (26%), Positives = 343/741 (46%), Gaps = 79/741 (10%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           LC +G   + + V       G      T+  +++AC    ++ +A  +H   L    E +
Sbjct: 130 LCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLRTSFEEN 189

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           + ++T L+  YAK G +  AR V + + + +L TW+A+I  YS +   +EV E+   + +
Sbjct: 190 LVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQINE 249

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            GL P+   F  I+  C      + GK +H  V+K G S    +  +++++Y   G L  
Sbjct: 250 MGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFI 309

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI----- 265
           AR  F+S  EK+ V WNSMIS Y Q  ++ EA ++F +M +  ++  VVTF  +I     
Sbjct: 310 ARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCEN 369

Query: 266 -----------------RSYNQLGQCDVAMEMVKRMESLGITPDVF---------TWTCM 299
                            R  +QL      + M  ++  L     +F         +W  M
Sbjct: 370 SANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNLLSWNSM 429

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           ISG+  NG    ++D F +M F G  P+ ++I + +SAC+ L+A+ +G   H+ + +  F
Sbjct: 430 ISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAFSFRKEF 489

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             ++ + N+L+  YS C +L ++ ++F  +  ++  SWN++I+G    G   KA  L  K
Sbjct: 490 DSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHK 549

Query: 420 MQESDVPPNVITW-----------------------------------NVLISGYIQNGN 444
           MQ+  +  +++T                                    N LIS Y   G+
Sbjct: 550 MQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGD 609

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            +    LF+ M       R+  SWN+LI GY+    +N  +  F +M      PN VT+L
Sbjct: 610 INAGKFLFEVMP-----WRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNYVTLL 664

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           ++LP+C  L+     K IH   +R  +    P++ SLI  YA+  NI     +F+    +
Sbjct: 665 NLLPSCRTLLQG---KSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKE 721

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           DI  WN+++  YV       ++  F ++    ++P+  TFLS+I A      ++L   V 
Sbjct: 722 DIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVM 781

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
             + +       I   +A+IDL+ R G +  A +  E +    D+  W  ++    +HG+
Sbjct: 782 AYVIQ-KGFDKHIVISNALIDLFARCGNISIAKKIFEGLS-SKDAVSWSTMINGYGLHGD 839

Query: 685 ID--LAVLAIERLFDLEPGDV 703
            +  LA+L+  RL  ++P  +
Sbjct: 840 SEAALALLSQMRLSGMKPDGI 860



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 146/341 (42%), Gaps = 40/341 (11%)

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           N++    L+  Y + G   +A  +  ++ + D V     +WN+LI+GY   G       V
Sbjct: 189 NLVIQTALVDFYAKTGRMVKARLVLDKISQPDLV-----TWNALISGYSLNGFDKEVFEV 243

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
            R++      PN  T  S++P C  +   +  K IHG V++    S   +  +LI  YA 
Sbjct: 244 LRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAG 303

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            GN+  +R +FD  + K+++ WNS+I  Y  +     A  +F QM    ++PN  TF+SI
Sbjct: 304 GGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSI 363

Query: 608 IL---------------AHSLAGMVDLGKKVFCSITECYQIIPMIE-------------- 638
           I                AH +   +D    V  ++   Y  +  +               
Sbjct: 364 IPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNL 423

Query: 639 -HYSAMIDLYGRSGKLEEAMEFIEDMPIE---PDSSIWEALLTACRIHGNIDLAVLAIER 694
             +++MI  YG +G  E +M+   DM  E   PD+     +L+AC     I L   A   
Sbjct: 424 LSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHAF 483

Query: 695 LFDLE-PGDVLIQRLILQIYAICGKPEDALKV-RKLERENT 733
            F  E   ++ I   +L  Y+ CGK   + K+ +K+   N 
Sbjct: 484 SFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNA 524


>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Cucumis sativus]
 gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Cucumis sativus]
          Length = 705

 Score =  340 bits (873), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 222/702 (31%), Positives = 349/702 (49%), Gaps = 82/702 (11%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMR- 118
           +LL+ C   N I  ++++H+   +VT      FV  +L+S+Y++ G + DAR+VF     
Sbjct: 43  HLLRQC---NGIQHSKQVHS-ATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAPF 98

Query: 119 --ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
               N   W+++I A        E ++L+  M   G+  D F FP +L+A  N G F   
Sbjct: 99  ECYSNFLLWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMC 158

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           K +H  V++ G      V N ++ +Y K  ++                            
Sbjct: 159 KNLHCHVVQFGFQNHLHVGNELIGMYAKLERM---------------------------- 190

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
              D+A ++FDKM    IK  VV++N ++  Y      + A  M  +ME  G+ P+  TW
Sbjct: 191 ---DDARKVFDKM---RIK-SVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVEPNPVTW 243

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           T ++S  A+ G   + + LF +M   GV P    +   +S C DL  L  G  IH   VK
Sbjct: 244 TSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQMIHGYMVK 303

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            GF D +   N+LI +Y K                                G  G A +L
Sbjct: 304 GGFNDYLFAKNALITLYGK-------------------------------GGGVGDAEKL 332

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND---KVKRNTASWNSLIA 473
           F +M+      N+++WN LIS + ++G  D+A++L  ++ K +   ++K N  +W+++I 
Sbjct: 333 FHEMK----VKNLVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIIC 388

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
           G+   G    +L VFRKMQ +    N VTI SVL  CA L A N  +E+HG V+R  ++ 
Sbjct: 389 GFASKGLGEESLEVFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARMDD 448

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
           ++ V N LI+ Y K G+      +F+ + ++D I+WNS+I GY  HG    AL  F+ M 
Sbjct: 449 NVLVGNGLINMYTKCGSFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFNHMI 508

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
             G +P+  TF++ + A S AG+V  G  +F  + + ++I P IEHY+ M+DL GR+G +
Sbjct: 509 KSGYRPDGVTFIAALSACSHAGLVAEGHWLFSQMRQNFKIEPEIEHYACMVDLLGRAGLV 568

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIY 713
           EEA   I+ MP+EP++ IW +LL +CR+H + DLA  A  ++ +L         L+  I+
Sbjct: 569 EEASNIIKGMPMEPNAYIWSSLLNSCRMHKDTDLAEEAAAKISNLNSKITGSHMLLSNIF 628

Query: 714 AICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
           A   + ED+ +VR   R    +   G  WIEVK  VY F  G
Sbjct: 629 AASCRWEDSARVRISARAKGLKKVPGWSWIEVKKKVYMFKAG 670



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/393 (20%), Positives = 163/393 (41%), Gaps = 49/393 (12%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFVK 94
           G L E + +   +  +G          +L  C D  +++  + +H ++      D +F K
Sbjct: 254 GHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQMIHGYMVKGGFNDYLFAK 313

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+++Y K G + DA ++F +M+ +NL +W+A+I +++    + + +EL   + +   +
Sbjct: 314 NALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALISSFAESGVYDKALELLSQLEKMEAY 373

Query: 155 PD---------------------------------------DFLFPKILQACGNCGDFEA 175
           P+                                             +L  C        
Sbjct: 374 PEMKPNVITWSAIICGFASKGLGEESLEVFRKMQLANVKANSVTIASVLSICAMLAALNL 433

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G+ MH  VI+  M     V N ++ +Y KCG        FE ++ +D ++WNSMI+GY  
Sbjct: 434 GREMHGHVIRARMDDNVLVGNGLINMYTKCGSFKPGFMVFEKLENRDSISWNSMIAGYGT 493

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVF 294
            G   +A   F+ M +   +   VTF   + + +  G       +  +M ++  I P++ 
Sbjct: 494 HGLGKDALATFNHMIKSGYRPDGVTFIAALSACSHAGLVAEGHWLFSQMRQNFKIEPEIE 553

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
            + CM+    + G   +A ++ K M    + PN    +S +++C   K   +  E    A
Sbjct: 554 HYACMVDLLGRAGLVEEASNIIKGMP---MEPNAYIWSSLLNSCRMHKDTDLAEEA---A 607

Query: 355 VKMGFTDDVLVGNSLI--NMYSKCEELEAAERV 385
            K+   +  + G+ ++  N+++     E + RV
Sbjct: 608 AKISNLNSKITGSHMLLSNIFAASCRWEDSARV 640



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 4/154 (2%)

Query: 32  LCG---NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVT 87
           +CG    G   E++ V   +     K    T  ++L  C    +++L R++H   +    
Sbjct: 387 ICGFASKGLGEESLEVFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARM 446

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + +V V   L+++Y KCG       VFE +  R+  +W++MI  Y      ++ +  F  
Sbjct: 447 DDNVLVGNGLINMYTKCGSFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFNH 506

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
           M++ G  PD   F   L AC + G    G  + S
Sbjct: 507 MIKSGYRPDGVTFIAALSACSHAGLVAEGHWLFS 540


>gi|296084001|emb|CBI24389.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 212/661 (32%), Positives = 344/661 (52%), Gaps = 71/661 (10%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T +L+ Y + G +  AR++FE M +R   +++AMI AY+R                    
Sbjct: 66  TAMLTAYYENGHIAKARKMFEKMPQRTTASYNAMITAYTRSN------------------ 107

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV-----LAVYVKCGKLI 209
                 P ++         EA KL   +          R RNS+     +    + G + 
Sbjct: 108 ------PMMIG--------EASKLFAEM----------RERNSISYAAMITGLARAGMVD 143

Query: 210 WARRFF--ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
            A   +    ++ +D V  N++ISGY ++G  +EA R+F+ M   +    V++++ ++  
Sbjct: 144 NAEELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERD----VISWSSMVDG 199

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM---SFVGV 324
           Y + G+   A E+ +RM       +V TWT MI G  + G       LF  M    FV V
Sbjct: 200 YCKKGKIGHARELFERMPER----NVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKV 255

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            P   T+T    AC++      G+++H L  +MGF  DV +GN++I MY +   +  A +
Sbjct: 256 NP--TTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARK 313

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           +FDM+  KDV SWN++IAGY Q     + Y LF K Q+ DV    I+W  +I+G+   G 
Sbjct: 314 IFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDV----ISWTTMITGFSNKGK 369

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
             ++++LF+ M K D +     +W ++I+G+   G+   A+  F +M      PN +T+ 
Sbjct: 370 MGKSIELFRMMPKQDDI-----AWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLS 424

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           SVL A A L   N+  +IH  V++  +E  L + NSL+  Y K GN+     IF  ++S 
Sbjct: 425 SVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSP 484

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           +I+++NS+I G+  +GF   AL+LF +M + G KPN  TFL ++ A +  G+++ G   F
Sbjct: 485 NIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYF 544

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
            S+   YQI P   HY+ ++DL GR+G L++A++ I  MP EP S +W ALL A RIH  
Sbjct: 545 KSMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLR 604

Query: 685 IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIE 744
           +D+A LA +++F LEP +     ++  +Y+  G+  D+ +VR  +     + S G  WI 
Sbjct: 605 LDVAKLAAQQIFKLEPDNAAPYAVLSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWII 664

Query: 745 V 745
           V
Sbjct: 665 V 665



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 218/405 (53%), Gaps = 9/405 (2%)

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           E DV   + ++  Y K G +  ARE+FE M ERN+ TW+AMI  + +   +     LF  
Sbjct: 187 ERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLR 246

Query: 148 MVQDGLFP-DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M ++G    +      + +AC   G+++ G  MH LV ++G      + N+++ +Y +  
Sbjct: 247 MRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFS 306

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            ++ AR+ F+ M+ KD V+WN++I+GY Q  E +E + LF+K  +++    V+++  +I 
Sbjct: 307 FVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKD----VISWTTMIT 362

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            ++  G+   ++E+ + M       D   WT +ISGF  NG   +A+  F EM    V P
Sbjct: 363 GFSNKGKMGKSIELFRMMPK----QDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRP 418

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           N +T++S +SA   L  L  G++IH+L VKMG   D+ + NSL++MY+KC  +    ++F
Sbjct: 419 NPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIF 478

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
             I   ++ S+NSMI G+ Q G+  +A ELF KM      PN IT+  ++S     G  +
Sbjct: 479 TSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLE 538

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           +  + F+ M    +++     +  ++    + G  ++A+ + R M
Sbjct: 539 QGWNYFKSMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSM 583



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/545 (23%), Positives = 243/545 (44%), Gaps = 117/545 (21%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           +S +  + + G L  A   F  M  K+ ++W +M++ Y++ G   +A ++F+KM +    
Sbjct: 35  HSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRT-- 92

Query: 256 LGVVTFNILIRSYNQ-----LGQCD-VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT 309
               ++N +I +Y +     +G+   +  EM +R        +  ++  MI+G A+ G  
Sbjct: 93  --TASYNAMITAYTRSNPMMIGEASKLFAEMRER--------NSISYAAMITGLARAGMV 142

Query: 310 SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL 369
             A +L+                                    L   + + D V   N+L
Sbjct: 143 DNAEELY------------------------------------LETPVEWRDPV-CSNAL 165

Query: 370 INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           I+ Y K   LE A R+F+ + ++DV SW+SM+ GYC+ G  G A ELF +M E     NV
Sbjct: 166 ISGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPER----NV 221

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
           +TW  +I G+++ G  +    LF RM K   VK N                         
Sbjct: 222 VTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVN------------------------- 256

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
                   P  +T++    AC+      +  ++HG V R   E  + + N++I  Y +  
Sbjct: 257 --------PTTLTVM--FEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFS 306

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
            +V +R IFD M+ KD+++WN+LI GYV +        LF++ +    + +  ++ ++I 
Sbjct: 307 FVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQ----QKDVISWTTMIT 362

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEH--YSAMIDLYGRSGKLEEAMEFIEDM---P 664
             S  G   +GK +     E ++++P  +   ++A+I  +  +G+ EEA+ +  +M    
Sbjct: 363 GFSNKG--KMGKSI-----ELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKV 415

Query: 665 IEPDSSIWEALLTA----CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
           + P+     ++L+A      ++  + +  L ++   +    D+ IQ  ++ +Y  CG   
Sbjct: 416 VRPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEF---DLSIQNSLVSMYTKCGNVA 472

Query: 721 DALKV 725
           D  ++
Sbjct: 473 DGHQI 477



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 35/276 (12%)

Query: 76  ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           ARK+   +N     DV     L++ Y +   +++   +FE  +++++ +W+ MI  +S  
Sbjct: 311 ARKIFDMMN---RKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNK 367

Query: 136 QRWREVVELFFLM---------------VQDGLF----------------PDDFLFPKIL 164
            +  + +ELF +M               V +G +                P+      +L
Sbjct: 368 GKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVL 427

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
            A         G  +H+LV+K+GM     ++NS++++Y KCG +    + F S++  + V
Sbjct: 428 SASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIV 487

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           ++NSMI+G+ Q G  +EA  LF KM  E  K   +TF  ++ +   +G  +      K M
Sbjct: 488 SFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSM 547

Query: 285 ESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           +SL  I P    + C++    + G    A+DL + M
Sbjct: 548 KSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSM 583


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 223/752 (29%), Positives = 361/752 (48%), Gaps = 120/752 (15%)

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           W+ +I +Y++  + R  + ++  + +     D+F+ P +L+ACG     + GK +H  V+
Sbjct: 92  WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151

Query: 185 KLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHR 244
           K G+                               ++D    N+++  Y +    + A  
Sbjct: 152 KKGL-------------------------------DRDVFVGNALMLMYGECACVEYARL 180

Query: 245 LFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFA 304
           +FDKM                                  ME      DV +W+ MI   +
Sbjct: 181 VFDKM----------------------------------MER-----DVVSWSTMIRSLS 201

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD-- 362
           +N     AL+L +EM+F+ V P+ V + S ++   D   + MG  +H+  ++    +   
Sbjct: 202 RNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMG 261

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V    +L++MY+KC  L  A ++F+ +  K                              
Sbjct: 262 VPTTTALLDMYAKCGHLGLARQLFNGLTQK------------------------------ 291

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
                 V++W  +I+G I++   +EA  LF     +    R+   W ++++ Y Q    +
Sbjct: 292 -----TVVSWTAMIAGCIRSNRLEEARALF-----DSTQNRDVMIWTAMLSAYAQANCID 341

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
            A  +F +M++S   P  VTI+S+L  CA   A +  K +H  + +  +E    +  +L+
Sbjct: 342 QAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALV 401

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
           D YAK G+I  +  +F    S+DI  WN++I G+ +HG+   ALD+F +M+  G+KPN  
Sbjct: 402 DMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDI 461

Query: 603 TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           TF+ ++ A S AG+V  GKK+F  +   + ++P IEHY  M+DL GR+G L+EA E I+ 
Sbjct: 462 TFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKS 521

Query: 663 MPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDA 722
           MPI+P++ +W AL+ ACR+H N  L  LA  +L ++EP +     L+  IYA   +  DA
Sbjct: 522 MPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDA 581

Query: 723 LKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY----SDLLYSWLQNVPE-NVT 777
             VRK  +    +   G   IEV   V+ F+ G  S       +++L    + + E    
Sbjct: 582 AGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYV 641

Query: 778 ARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAK 836
             +S   L I+EEEKE     HSEKLA+AF LI  S AP T IRIVKN+R+C  CH   K
Sbjct: 642 PDTSTVLLNIDEEEKETALTYHSEKLAMAFGLI--STAPSTPIRIVKNLRVCNDCHAATK 699

Query: 837 YVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +S ++   I + D    HHF+ G CSCGDYW
Sbjct: 700 LLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 189/401 (47%), Gaps = 50/401 (12%)

Query: 62  NLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           ++L+AC   +   L +++H F L    + DVFV   L+ +Y +C C++ AR VF+ M ER
Sbjct: 129 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMER 188

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           ++ +WS MI + SR++ +   +EL   M    + P +     ++    +  +   GK MH
Sbjct: 189 DVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMH 248

Query: 181 SLVIK------LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
           + VI+      +G+        ++L +Y KCG L  AR+ F  + +K  V+W +MI+G  
Sbjct: 249 AYVIRNSNNEHMGVPTT----TALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCI 304

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
           +    +EA  LFD     +    V+ +  ++ +Y Q    D A  +  +M + G+ P   
Sbjct: 305 RSNRLEEARALFDSTQNRD----VMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRP--- 357

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
                                             VTI S +S C    AL +G  +HS  
Sbjct: 358 --------------------------------TKVTIVSLLSLCAVAGALDLGKWVHSYI 385

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
            K     D ++  +L++MY+KC ++ AA R+F     +D+  WN++I G+   GY  +A 
Sbjct: 386 DKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEAL 445

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           ++F +M+   V PN IT+  L+      G   E   LF++M
Sbjct: 446 DIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKM 486



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 159/345 (46%), Gaps = 45/345 (13%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTE-IDVFVKTK 96
           E I  ++ +  + ++V   + +NL     D+ ++ + + +HA++  N   E + V   T 
Sbjct: 211 ELIREMNFMQVRPSEVAMVSMVNLFA---DTANMRMGKAMHAYVIRNSNNEHMGVPTTTA 267

Query: 97  LLSVYAKCG--------------------------C-----LDDAREVFEDMRERNLYTW 125
           LL +YAKCG                          C     L++AR +F+  + R++  W
Sbjct: 268 LLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIW 327

Query: 126 SAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK 185
           +AM+ AY++     +   LF  M   G+ P       +L  C   G  + GK +HS + K
Sbjct: 328 TAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDK 387

Query: 186 --LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
             + + C+  +  +++ +Y KCG +  A R F     +D   WN++I+G+   G  +EA 
Sbjct: 388 ERVEVDCI--LNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEAL 445

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISG 302
            +F +M R+ +K   +TF  L+ + +  G      ++ ++M  + G+ P +  + CM+  
Sbjct: 446 DIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDL 505

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
             + G   +A ++ K M    + PN +   + ++AC   K   +G
Sbjct: 506 LGRAGLLDEAHEMIKSMP---IKPNTIVWGALVAACRLHKNPQLG 547



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 123/252 (48%), Gaps = 7/252 (2%)

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
           +A WN +I  Y +  Q  NAL V+ +++   F  +     SVL AC  +  +   KEIHG
Sbjct: 89  SAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHG 148

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
            VL++ L+  + V N+L+  Y +   + Y+R +FD M  +D+++W+++I     +  +  
Sbjct: 149 FVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDM 208

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM-IEHYSAM 643
           AL+L  +M    ++P+    +S++   +    + +GK +   +        M +   +A+
Sbjct: 209 ALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTAL 268

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD-LEPGD 702
           +D+Y + G L  A +    +  +   S W A++  C     ++ A      LFD  +  D
Sbjct: 269 LDMYAKCGHLGLARQLFNGLTQKTVVS-WTAMIAGCIRSNRLEEA----RALFDSTQNRD 323

Query: 703 VLIQRLILQIYA 714
           V+I   +L  YA
Sbjct: 324 VMIWTAMLSAYA 335



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 84/400 (21%), Positives = 175/400 (43%), Gaps = 40/400 (10%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL-VTEIDVFVKTK 96
           +++A  + D + T G +  + T ++LL  C  + ++ L + +H++++    E+D  + T 
Sbjct: 340 IDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTA 399

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+ +YAKCG ++ A  +F +   R++  W+A+I  ++      E +++F  M + G+ P+
Sbjct: 400 LVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPN 459

Query: 157 DFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D  F  +L AC + G    G KL   +V   G+         ++ +  + G L  A    
Sbjct: 460 DITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMI 519

Query: 216 ESMDEK-DGVAWNSMISG-----YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-Y 268
           +SM  K + + W ++++        Q+GE      L       EI+     +N+L+ + Y
Sbjct: 520 KSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLL-------EIEPENCGYNVLMSNIY 572

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG-----------FAQNGRTSQAL-DLF 316
               +   A  + K M+++G+  +       ++G             Q  R ++ L ++ 
Sbjct: 573 AAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMR 632

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK- 375
           ++++  G +P+    TS +    D +     +  HS  + M F       ++ I +    
Sbjct: 633 RKLNEAGYVPD----TSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNL 688

Query: 376 --CEELEAAERVFDMIKD-----KDVYSWNSMIAGYCQAG 408
             C +  AA ++   I       +D   ++    GYC  G
Sbjct: 689 RVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCG 728



 Score = 40.0 bits (92), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 9/103 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKL-----HAFLNLVTEI 89
           +G   EA+ +   +  QG K    T+I LL AC  +  +   +KL     H F  LV +I
Sbjct: 438 HGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTF-GLVPQI 496

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMR-ERNLYTWSAMIGA 131
           + +    ++ +  + G LD+A E+ + M  + N   W A++ A
Sbjct: 497 EHY--GCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAA 537


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 201/647 (31%), Positives = 344/647 (53%), Gaps = 44/647 (6%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N LI  Y +  + D+A  +  RM    +  +V +WT ++ G+ Q G    +L L  EM +
Sbjct: 43  NDLIDMYGKCSRVDLACSVFDRM----LERNVVSWTALMCGYLQEGNAKGSLALLCEMGY 98

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
            GV PN  T ++++ AC  L  +  GM+IH + VK GF    +VGN+ I+MYSKC  +  
Sbjct: 99  SGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGM 158

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS---- 437
           AE+VF+ +  +++ SWN+MIAG+   G   K+  LF +MQ     P+  T+   +     
Sbjct: 159 AEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGA 218

Query: 438 -GYIQNGNEDEA-------------------VDLFQRMG---KNDKV-----KRNTASWN 469
            G I+ G +  A                   VDL+ + G   +  KV     ++N  SW+
Sbjct: 219 LGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWS 278

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           +LI G+ Q G    A+ +FR+++ S    +   +  ++   A L    + K++H  +L+ 
Sbjct: 279 ALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKV 338

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
                + V NS+ID Y K G    +  +F  M  +++++W  +I GY  HG    A+ LF
Sbjct: 339 PSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLF 398

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
           ++M+  G++ +   +L+++ A S +G++   ++ F  +   +Q+ P IEHY+ M+D+ GR
Sbjct: 399 NRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGR 458

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +G+L+EA   IE+M ++P+  IW+ LL+ACR+HGN+++     E LF ++  + +   ++
Sbjct: 459 AGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMM 518

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             IYA  G  ++  +VRKL +    +   GQ W+E+   ++ F  G  +   ++ ++  L
Sbjct: 519 SNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEML 578

Query: 770 QNVPENVTARSSHS-GLC-----IEEEEKEEISGIHSEKLALAFALI--GSSQAPHTIRI 821
           + +   V     ++ GL      +EEE KEE   +HSEKLA+  AL+  G  +    IR+
Sbjct: 579 KEMERRVKEEVGYAYGLRFALHDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRV 638

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            KN+R+C  CHE  K +S +      + D+   H F++G CSCGDYW
Sbjct: 639 FKNLRVCGDCHEFIKGLSKILKKVFVVRDANRFHRFEDGLCSCGDYW 685



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/492 (27%), Positives = 233/492 (47%), Gaps = 45/492 (9%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           R     LL+ C  +       ++HA  +N+    D+ +   L+ +Y KC  +D A  VF+
Sbjct: 4   RQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFD 63

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            M ERN+ +W+A++  Y ++   +  + L   M   G+ P++F F   L+ACG  G  E 
Sbjct: 64  RMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVEN 123

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +H + +K G   V  V N+ + +Y KCG++  A + F  M  ++ V+WN+MI+G+  
Sbjct: 124 GMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTH 183

Query: 236 IGENDEAHRLFDKMCRE--------------------------EIKLGVVT--FNILIRS 267
            G   ++  LF +M  +                          +I   ++T  F I IR+
Sbjct: 184 EGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRN 243

Query: 268 ---------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
                    Y + G    A ++  R+E      ++ +W+ +I GFAQ G   +A+DLF++
Sbjct: 244 IIASAIVDLYAKCGYLFEAQKVFDRIEQ----KNLISWSALIQGFAQEGNLLEAMDLFRQ 299

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           +       +G  ++  +    DL  +  G ++H   +K+    D+ V NS+I+MY KC  
Sbjct: 300 LRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGL 359

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
            E AER+F  ++ ++V SW  MI GY + G   KA  LF +MQ   +  + + +  L+S 
Sbjct: 360 TEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSA 419

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
              +G   E+ + F R+  N ++K N   +  ++    + GQ   A  +   M+     P
Sbjct: 420 CSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMK---LKP 476

Query: 499 NCVTILSVLPAC 510
           N     ++L AC
Sbjct: 477 NEGIWQTLLSAC 488



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 88/176 (50%), Gaps = 4/176 (2%)

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
           ++H   +       L + N LID Y K   +  + ++FD M  +++++W +L+CGY+  G
Sbjct: 25  QVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEG 84

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF-CSITECYQIIPMIEH 639
               +L L  +M   G+KPN  TF + + A    G+V+ G ++    +   ++ + ++  
Sbjct: 85  NAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVG- 143

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
            +A ID+Y + G++  A +    MP     S W A++      GN   +++  +R+
Sbjct: 144 -NATIDMYSKCGRIGMAEQVFNKMPFRNLVS-WNAMIAGHTHEGNGRKSLVLFQRM 197


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 220/720 (30%), Positives = 356/720 (49%), Gaps = 60/720 (8%)

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA-----WNSMISGYFQIGENDEAHRLFD 247
           +V N  L    K GKL  A  FF+ MD K GV+     +  +     ++        L +
Sbjct: 47  QVENLHLVSLSKHGKLNEAFEFFQEMD-KAGVSVSLYSYQCLFEACRELRSLSHGRLLHN 105

Query: 248 KMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
           +M        V+  N +++ Y + G  + A ++   M  L    +  + T MIS +A+ G
Sbjct: 106 RMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDL----NAVSRTTMISAYAEQG 161

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
              +A+ LF  M   G  P     T+ + +  + +AL +G +IH+  ++ G   +  +  
Sbjct: 162 LLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIET 221

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
            ++NMY KC  L  A+RVFD +  K   +W  ++ GY QAG    A +LF+ +    V  
Sbjct: 222 GIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEW 281

Query: 428 NVITWNV-----------------------------------LISGYIQNGNEDEAVDLF 452
           +   ++V                                   L+  YI+  + + A   F
Sbjct: 282 DSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAF 341

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS-SCFYPNCVTILSVLPACA 511
           Q + +      N  SW+++I+GY Q+ Q   A+  F+ ++S +    N  T  S+  AC+
Sbjct: 342 QEIREP-----NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACS 396

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
            L   N   ++H   ++RSL  S    ++LI  Y+K G +  +  +F+ M + DI+ W +
Sbjct: 397 VLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTA 456

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
            I G+  +G    AL LF++M S G+KPN  TF++++ A S AG+V+ GK    ++   Y
Sbjct: 457 FISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKY 516

Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
            + P I+HY  MID+Y RSG L+EA+ F+++MP EPD+  W+  L+ C  H N++L  +A
Sbjct: 517 NVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIA 576

Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
            E L  L+P D     L   +Y   GK E+A +V KL  E   +      WI+ K  ++ 
Sbjct: 577 GEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHR 636

Query: 752 FVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALI- 810
           F+ G      S  +Y  L+     +         C   E +E++   HSE+LA+AF LI 
Sbjct: 637 FIVGDKHHPQSQEIYEKLKEFDGFMEGDMFQ---CSMTERREQLLD-HSERLAIAFGLIS 692

Query: 811 --GSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             G+++AP  I++ KN+R C  CHE AK+VS++   EI + DS+  HHFK G+CSC DYW
Sbjct: 693 VNGNARAP--IKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 750



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/547 (25%), Positives = 253/547 (46%), Gaps = 46/547 (8%)

Query: 7   TTFQQLHSLLTKKSNP----------RFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVR 56
             F Q+ S ++ KS+           +  + HL  L  +G+LNEA      +   G  V 
Sbjct: 21  ANFNQIPSWVSLKSSTSSVKISHKQGQVENLHLVSLSKHGKLNEAFEFFQEMDKAGVSVS 80

Query: 57  RNTYINLLQACIDSNSIHLARKLHAFLNL-VTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
             +Y  L +AC +  S+   R LH  + + +    V ++  +L +Y +CG L+DA ++F+
Sbjct: 81  LYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMYCECGSLEDADKLFD 140

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
           +M + N  + + MI AY+      + V LF  M++ G  P   ++  +L++  N    + 
Sbjct: 141 EMSDLNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDI 200

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G+ +H+ VI+ G+     +   ++ +YVKCG L+ A+R F+ M  K  VAW  ++ GY Q
Sbjct: 201 GRQIHAHVIRAGLCSNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQ 260

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI------ 289
            G   +A +LF  +  E ++     F++++++   L +     ++   +  LG+      
Sbjct: 261 AGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSV 320

Query: 290 -------------------------TPDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVG 323
                                     P+  +W+ +ISG+ Q  +  +A+  FK + S   
Sbjct: 321 GTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNA 380

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V+ N  T TS   AC+ L    +G ++H+ A+K          ++LI MYSKC  L+ A 
Sbjct: 381 VVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDAH 440

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
            VF+ + + D+ +W + I+G+   G   +A  LF KM    + PN +T+  +++     G
Sbjct: 441 EVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAG 500

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
             ++       M +   V      ++ +I  Y + G  + AL   R M++  F P+ ++ 
Sbjct: 501 LVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEAL---RFMKNMPFEPDAMSW 557

Query: 504 LSVLPAC 510
              L  C
Sbjct: 558 KCFLSGC 564


>gi|359479080|ref|XP_003632211.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
           mitochondrial [Vitis vinifera]
          Length = 744

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 212/661 (32%), Positives = 344/661 (52%), Gaps = 71/661 (10%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T +L+ Y + G +  AR++FE M +R   +++AMI AY+R                    
Sbjct: 145 TAMLTAYYENGHIAKARKMFEKMPQRTTASYNAMITAYTRSN------------------ 186

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV-----LAVYVKCGKLI 209
                 P ++         EA KL   +          R RNS+     +    + G + 
Sbjct: 187 ------PMMIG--------EASKLFAEM----------RERNSISYAAMITGLARAGMVD 222

Query: 210 WARRFF--ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
            A   +    ++ +D V  N++ISGY ++G  +EA R+F+ M   +    V++++ ++  
Sbjct: 223 NAEELYLETPVEWRDPVCSNALISGYLKVGRLEEATRIFEGMGERD----VISWSSMVDG 278

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM---SFVGV 324
           Y + G+   A E+ +RM       +V TWT MI G  + G       LF  M    FV V
Sbjct: 279 YCKKGKIGHARELFERMPER----NVVTWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKV 334

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            P   T+T    AC++      G+++H L  +MGF  DV +GN++I MY +   +  A +
Sbjct: 335 NP--TTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSFVVEARK 392

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           +FDM+  KDV SWN++IAGY Q     + Y LF K Q+ DV    I+W  +I+G+   G 
Sbjct: 393 IFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDV----ISWTTMITGFSNKGK 448

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
             ++++LF+ M K D +     +W ++I+G+   G+   A+  F +M      PN +T+ 
Sbjct: 449 MGKSIELFRMMPKQDDI-----AWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLS 503

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           SVL A A L   N+  +IH  V++  +E  L + NSL+  Y K GN+     IF  ++S 
Sbjct: 504 SVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSP 563

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           +I+++NS+I G+  +GF   AL+LF +M + G KPN  TFL ++ A +  G+++ G   F
Sbjct: 564 NIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYF 623

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
            S+   YQI P   HY+ ++DL GR+G L++A++ I  MP EP S +W ALL A RIH  
Sbjct: 624 KSMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSMPCEPHSGVWGALLGASRIHLR 683

Query: 685 IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIE 744
           +D+A LA +++F LEP +     ++  +Y+  G+  D+ +VR  +     + S G  WI 
Sbjct: 684 LDVAKLAAQQIFKLEPDNAAPYAVLSFLYSSAGRNRDSEQVRMAQGLKGVKKSAGYSWII 743

Query: 745 V 745
           V
Sbjct: 744 V 744



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 218/405 (53%), Gaps = 9/405 (2%)

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           E DV   + ++  Y K G +  ARE+FE M ERN+ TW+AMI  + +   +     LF  
Sbjct: 266 ERDVISWSSMVDGYCKKGKIGHARELFERMPERNVVTWTAMIDGHMKMGCYEVGFGLFLR 325

Query: 148 MVQDGLFP-DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M ++G    +      + +AC   G+++ G  MH LV ++G      + N+++ +Y +  
Sbjct: 326 MRKEGFVKVNPTTLTVMFEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFS 385

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            ++ AR+ F+ M+ KD V+WN++I+GY Q  E +E + LF+K  +++    V+++  +I 
Sbjct: 386 FVVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKD----VISWTTMIT 441

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            ++  G+   ++E+ + M       D   WT +ISGF  NG   +A+  F EM    V P
Sbjct: 442 GFSNKGKMGKSIELFRMMPK----QDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRP 497

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           N +T++S +SA   L  L  G++IH+L VKMG   D+ + NSL++MY+KC  +    ++F
Sbjct: 498 NPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIF 557

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
             I   ++ S+NSMI G+ Q G+  +A ELF KM      PN IT+  ++S     G  +
Sbjct: 558 TSINSPNIVSFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLE 617

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           +  + F+ M    +++     +  ++    + G  ++A+ + R M
Sbjct: 618 QGWNYFKSMKSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSM 662



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 126/544 (23%), Positives = 241/544 (44%), Gaps = 115/544 (21%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           +S +  + + G L  A   F  M  K+ ++W +M++ Y++ G   +A ++F+KM +    
Sbjct: 114 HSQITKHGRNGDLKEAESIFSRMPHKNAISWTAMLTAYYENGHIAKARKMFEKMPQRT-- 171

Query: 256 LGVVTFNILIRSYNQ-----LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTS 310
               ++N +I +Y +     +G+       ++   S+       ++  MI+G A+ G   
Sbjct: 172 --TASYNAMITAYTRSNPMMIGEASKLFAEMRERNSI-------SYAAMITGLARAGMVD 222

Query: 311 QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI 370
            A +L+                                    L   + + D V   N+LI
Sbjct: 223 NAEELY------------------------------------LETPVEWRDPV-CSNALI 245

Query: 371 NMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
           + Y K   LE A R+F+ + ++DV SW+SM+ GYC+ G  G A ELF +M E     NV+
Sbjct: 246 SGYLKVGRLEEATRIFEGMGERDVISWSSMVDGYCKKGKIGHARELFERMPER----NVV 301

Query: 431 TWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
           TW  +I G+++ G  +    LF RM K   VK N                          
Sbjct: 302 TWTAMIDGHMKMGCYEVGFGLFLRMRKEGFVKVN-------------------------- 335

Query: 491 MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGN 550
                  P  +T++    AC+      +  ++HG V R   E  + + N++I  Y +   
Sbjct: 336 -------PTTLTVM--FEACSEFGEYKEGIQMHGLVSRMGFEFDVFLGNAIIIMYCRFSF 386

Query: 551 IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA 610
           +V +R IFD M+ KD+++WN+LI GYV +        LF++ +    + +  ++ ++I  
Sbjct: 387 VVEARKIFDMMNRKDVVSWNALIAGYVQNDEVEEGYVLFEKTQ----QKDVISWTTMITG 442

Query: 611 HSLAGMVDLGKKVFCSITECYQIIPMIEH--YSAMIDLYGRSGKLEEAMEFIEDM---PI 665
            S  G   +GK +     E ++++P  +   ++A+I  +  +G+ EEA+ +  +M    +
Sbjct: 443 FSNKG--KMGKSI-----ELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVV 495

Query: 666 EPDSSIWEALLTA----CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPED 721
            P+     ++L+A      ++  + +  L ++   +    D+ IQ  ++ +Y  CG   D
Sbjct: 496 RPNPLTLSSVLSASAGLATLNQGLQIHTLVVKMGMEF---DLSIQNSLVSMYTKCGNVAD 552

Query: 722 ALKV 725
             ++
Sbjct: 553 GHQI 556



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 127/276 (46%), Gaps = 35/276 (12%)

Query: 76  ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           ARK+   +N     DV     L++ Y +   +++   +FE  +++++ +W+ MI  +S  
Sbjct: 390 ARKIFDMMN---RKDVVSWNALIAGYVQNDEVEEGYVLFEKTQQKDVISWTTMITGFSNK 446

Query: 136 QRWREVVELFFLM---------------VQDGLF----------------PDDFLFPKIL 164
            +  + +ELF +M               V +G +                P+      +L
Sbjct: 447 GKMGKSIELFRMMPKQDDIAWTAVISGFVGNGEYEEAIYWFIEMLRKVVRPNPLTLSSVL 506

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
            A         G  +H+LV+K+GM     ++NS++++Y KCG +    + F S++  + V
Sbjct: 507 SASAGLATLNQGLQIHTLVVKMGMEFDLSIQNSLVSMYTKCGNVADGHQIFTSINSPNIV 566

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           ++NSMI+G+ Q G  +EA  LF KM  E  K   +TF  ++ +   +G  +      K M
Sbjct: 567 SFNSMITGFAQNGFGEEALELFHKMLNEGQKPNEITFLGVLSACTHVGLLEQGWNYFKSM 626

Query: 285 ESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           +SL  I P    + C++    + G    A+DL + M
Sbjct: 627 KSLYQIEPGPHHYACIVDLLGRAGFLDDAIDLIRSM 662


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 210/646 (32%), Positives = 334/646 (51%), Gaps = 69/646 (10%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++  W  M  G A +     A+ L+  M  +G++PN  T    + +C  LK    G +I
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQI 125

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEE-------------------------------L 379
           H   +K+G+  D+ V  SLI+MY K                                  +
Sbjct: 126 HGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYI 185

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-- 437
           E+A+++FD I  KDV SWN++I+GY   G   +A +LF +M +++V P+  T   ++S  
Sbjct: 186 ESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSAC 245

Query: 438 ---GYIQNGNE-----------------DEAVDLFQRMGKNDKV--------KRNTASWN 469
              G IQ G +                 +  +DL+ + G+ +           ++  SWN
Sbjct: 246 AQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWN 305

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           ++I GY  L     AL +F++M  S   PN VT+LS+LPACA L A +  + IH  + +R
Sbjct: 306 TMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKR 365

Query: 530 --SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
              + ++  +  SLID YAK G+I  +  +F+ M  + +   N++I G+ +HG  +AA D
Sbjct: 366 IKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFD 425

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           +F +M+  G++P+  TF+ ++ A S +GM+DLG+++F S+T+ Y+I P +EHY  MIDL 
Sbjct: 426 IFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLL 485

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           G  G  +EA E I  M +EPD  IW +LL AC++HGN++L     ++L  +EP +     
Sbjct: 486 GHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYV 545

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGW-----SESYS 762
           L+  IYA  G+  +   +R L  +   +   G   IE+ ++V+ F+ G        E Y 
Sbjct: 546 LLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 605

Query: 763 DLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
            L    +          +S     +EEE K+     HSEKLA+AF LI S++    + IV
Sbjct: 606 MLEEMEVLLEEAGFVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLI-STKPGTKLTIV 664

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN+R+C +CHE  K +S ++  EI   D    HHF++G CSC DYW
Sbjct: 665 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 123/508 (24%), Positives = 225/508 (44%), Gaps = 73/508 (14%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           L  A  VFE ++E NL  W+ M   ++        ++L+  M+  GL P+ + FP +L++
Sbjct: 53  LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKS 112

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C      + G+ +H  V+KLG      V  S++++YVK G+   A + F+    +D V++
Sbjct: 113 CAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSY 172

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
            ++I+GY   G  + A ++FD++  ++    VV++N +I  Y   G    A+++ K M  
Sbjct: 173 TALITGYASRGYIESAQKMFDEIPVKD----VVSWNAIISGYADTGNNKEALDLFKEMMK 228

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
             + PD  T   ++S  AQ+G                                   ++ +
Sbjct: 229 TNVKPDESTMVTVVSACAQSG-----------------------------------SIQL 253

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G ++HS     G   ++ + N+LI++YSKC E+E A  +F  + +KDV SWN+MI GY  
Sbjct: 254 GRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTH 313

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED-------------------- 446
                +A  LF +M  S   PN +T   ++    Q G  D                    
Sbjct: 314 LNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNAS 373

Query: 447 ----EAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
                 +D++ + G         N    R  ++ N++I G+   G+ N A  +F +M+ +
Sbjct: 374 SLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKN 433

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVY 553
              P+ +T + +L AC++    +  + I   + +   +   L     +ID     G    
Sbjct: 434 GIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKE 493

Query: 554 SRTIFDGMS-SKDIITWNSLICGYVLHG 580
           +  + + M+   D + W SL+    +HG
Sbjct: 494 AEEMINTMTMEPDGVIWCSLLKACKMHG 521



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 157/309 (50%), Gaps = 11/309 (3%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN---LVTEIDVF 92
           G   EA+ +   +     K   +T + ++ AC  S SI L R++H++++   L + + + 
Sbjct: 214 GNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIV 273

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
               L+ +Y+KCG ++ A  +F+ +  +++ +W+ MIG Y+    ++E + LF  M++ G
Sbjct: 274 --NALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSG 331

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL--GMSCVRRVRNSVLAVYVKCGKLIW 210
             P+D     IL AC   G  + G+ +H  + K   G++    +R S++ +Y KCG +  
Sbjct: 332 ENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEA 391

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A + F SM  +   A N+MI G+   G  + A  +F +M +  I+   +TF  L+ + + 
Sbjct: 392 AHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSH 451

Query: 271 LGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G  D+   + + M ++  ITP +  + CMI      G   +A ++   M+   + P+GV
Sbjct: 452 SGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMT---MEPDGV 508

Query: 330 TITSAISAC 338
              S + AC
Sbjct: 509 IWCSLLKAC 517



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 193/433 (44%), Gaps = 44/433 (10%)

Query: 77  RKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQ 136
           +  H   +  +  DV   T L++ YA  G ++ A+++F+++  +++ +W+A+I  Y+   
Sbjct: 155 KDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTG 214

Query: 137 RWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRN 196
             +E ++LF  M++  + PD+     ++ AC   G  + G+ +HS +   G+    ++ N
Sbjct: 215 NNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVN 274

Query: 197 SVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL 256
           +++ +Y KCG++  A   F+ +  KD ++WN+MI GY  +    EA  LF +M R     
Sbjct: 275 ALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSGENP 334

Query: 257 GVVTFNILIRSYNQLGQCDVA------------------------MEMVKRMESLGITPD 292
             VT   ++ +  QLG  D                          ++M  +   +     
Sbjct: 335 NDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQ 394

Query: 293 VFTW---------TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
           VF             MI GFA +GR + A D+F  M   G+ P+ +T    +SAC+    
Sbjct: 395 VFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGM 454

Query: 344 LAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMI 401
           L +G  I  S+      T  +     +I++       + AE + + M  + D   W S++
Sbjct: 455 LDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLL 514

Query: 402 AGYCQAGYC--GKAY-ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
                 G    G+++ +  IK++    P N  ++ +L + Y   G  +E  ++  R   N
Sbjct: 515 KACKMHGNVELGESFAQKLIKIE----PENPGSYVLLSNIYATAGRWNEVANI--RALLN 568

Query: 459 DKVKRNTASWNSL 471
           DK  +     +S+
Sbjct: 569 DKGMKKVPGCSSI 581


>gi|255545144|ref|XP_002513633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547541|gb|EEF49036.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 209/700 (29%), Positives = 350/700 (50%), Gaps = 83/700 (11%)

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +Y+KC  ++ AR+ F++M  R++ +W+ ++ A+ +++R  E +++F  MV  G +P+ F 
Sbjct: 63  LYSKCFSVEHARQFFDEMPCRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFT 122

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           F  IL++C   GDF  GK +H+  IK G    + + +S++ +Y +      A + F  MD
Sbjct: 123 FSSILRSCFALGDFSYGKRIHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMD 182

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-------------------------- 253
             D V+W ++I+   Q G+   A R++ +M   +                          
Sbjct: 183 SGDTVSWTTVIASCVQAGKCSHALRIYMEMLEAQVSSNEFTFVRLLAASSFIGLQYGKLI 242

Query: 254 --------IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP--DVFTWTCMISGF 303
                   +KL +V    L+  Y++  + + A+++ K      +TP  DV  WT +ISG 
Sbjct: 243 HAHAIVLGVKLNLVLKTALVNMYSRCQRIEDAIKVSK------LTPEYDVILWTAIISGL 296

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
           AQN +  +A+  F +M   GV  +  T  S +S C  + +L +G +IHS  ++ G  DDV
Sbjct: 297 AQNMKFQEAVAAFHKMEISGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDV 356

Query: 364 LVGNSLINMYSKCE-ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
            VGN+L++MY KC   +E   R+F  IK  +V SW S+IAG+ + G+   +  LF++M+ 
Sbjct: 357 PVGNALVDMYMKCSCIVEHGLRMFRGIKSPNVISWTSLIAGFAEHGFQQDSLNLFMEMRT 416

Query: 423 SDVPPN-----------------------------------VITWNVLISGYIQNGNEDE 447
             V PN                                   V+  N L+  Y  +G  D+
Sbjct: 417 VGVQPNSFTLSIVLRVCSAIKSPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSGRVDD 476

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           A  + + M + D +     ++ SL     Q+G    AL V   M ++    +  ++    
Sbjct: 477 AWRVVKDMNQRDSI-----TYTSLATRLNQMGYHELALSVISHMFNADVKIDGFSLTCFF 531

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
            A A L      K++H   L+  L   L V N LID Y K G +  +R  F  ++  D++
Sbjct: 532 SASASLGRIETGKQLHCYSLKSGLSCCLSVANGLIDLYGKYGLVHEARRAFTEITEPDVV 591

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
           +WN LI G   +G   +AL  FD M+  G++P+  TFL ++   S  G+VD+G + F S+
Sbjct: 592 SWNGLISGLASNGHISSALSAFDDMRLRGIQPDSITFLLVLSTCSHGGLVDMGLQYFHSM 651

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
            E + + P  +HY  ++D+ GR+G+LEEAM  IE MP+EPD+SI++ LL AC IH N++L
Sbjct: 652 REMHDVEPQSDHYVCLVDILGRAGRLEEAMNIIETMPLEPDASIYKTLLAACSIHRNMNL 711

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
                 R  +L P D     L++++Y  CG+ +   K R+
Sbjct: 712 GEDVARRGLELNPLDPAFHLLLVKLYDDCGRYDLGEKTRR 751



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 155/616 (25%), Positives = 283/616 (45%), Gaps = 88/616 (14%)

Query: 162 KILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK 221
           K++  C N    + G  +HS +IKLG+     + N++L++Y KC  +  AR+FF+ M  +
Sbjct: 25  KVVSLC-NLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMPCR 83

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-------------- 267
           D V+W  ++S + +   ++EA  +FD M          TF+ ++RS              
Sbjct: 84  DVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKRIH 143

Query: 268 ---------------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN 306
                                Y++    + A ++   M+S     D  +WT +I+   Q 
Sbjct: 144 ASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDS----GDTVSWTTVIASCVQA 199

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           G+ S AL ++ EM    V  N  T    ++A +    L  G  IH+ A+ +G   ++++ 
Sbjct: 200 GKCSHALRIYMEMLEAQVSSNEFTFVRLLAA-SSFIGLQYGKLIHAHAIVLGVKLNLVLK 258

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
            +L+NMYS+C+ +E A +V  +  + DV  W ++I+G  Q     +A   F KM+ S V 
Sbjct: 259 TALVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKMEISGVS 318

Query: 427 PNVITWNVLI----------------SGYIQNGNEDEA------VDLFQ----------R 454
            +  T+  ++                S  I+ G ED+       VD++           R
Sbjct: 319 ASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPVGNALVDMYMKCSCIVEHGLR 378

Query: 455 MGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV 514
           M +  K   N  SW SLIAG+ + G + ++L +F +M++    PN  T+  VL  C+ + 
Sbjct: 379 MFRGIK-SPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLSIVLRVCSAIK 437

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
           +  +  ++HG +++   +  + V N+L+D YA SG +  +  +   M+ +D IT+ SL  
Sbjct: 438 SPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSGRVDDAWRVVKDMNQRDSITYTSLAT 497

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC-----SITE 629
                G+   AL +   M +  +K +  +      A +  G ++ GK++ C      ++ 
Sbjct: 498 RLNQMGYHELALSVISHMFNADVKIDGFSLTCFFSASASLGRIETGKQLHCYSLKSGLSC 557

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
           C  +       + +IDLYG+ G + EA     ++  EPD   W  L++    +G+I  A+
Sbjct: 558 CLSVA------NGLIDLYGKYGLVHEARRAFTEIT-EPDVVSWNGLISGLASNGHISSAL 610

Query: 690 LAIE--RLFDLEPGDV 703
            A +  RL  ++P  +
Sbjct: 611 SAFDDMRLRGIQPDSI 626



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/356 (22%), Positives = 153/356 (42%), Gaps = 34/356 (9%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           L  N +  EA+     +   G      TY+++L  CI   S+ L R++H+  +    E D
Sbjct: 296 LAQNMKFQEAVAAFHKMEISGVSASNFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDD 355

Query: 91  VFVKTKLLSVYAKCGCL-DDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           V V   L+ +Y KC C+ +    +F  ++  N+ +W+++I  ++     ++ + LF  M 
Sbjct: 356 VPVGNALVDMYMKCSCIVEHGLRMFRGIKSPNVISWTSLIAGFAEHGFQQDSLNLFMEMR 415

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             G+ P+ F    +L+ C           +H  +IK        V N+++  Y   G++ 
Sbjct: 416 TVGVQPNSFTLSIVLRVCSAIKSPYQTLKLHGHIIKTKADYDVVVGNALVDAYAGSGRVD 475

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A R  + M+++D + + S+ +   Q+G ++ A  +   M   ++K+   +      +  
Sbjct: 476 DAWRVVKDMNQRDSITYTSLATRLNQMGYHELALSVISHMFNADVKIDGFSLTCFFSASA 535

Query: 270 QLGQCDVAMEM-------------------------------VKRMESLGITPDVFTWTC 298
            LG+ +   ++                                +R  +    PDV +W  
Sbjct: 536 SLGRIETGKQLHCYSLKSGLSCCLSVANGLIDLYGKYGLVHEARRAFTEITEPDVVSWNG 595

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSL 353
           +ISG A NG  S AL  F +M   G+ P+ +T    +S C+    + MG++  HS+
Sbjct: 596 LISGLASNGHISSALSAFDDMRLRGIQPDSITFLLVLSTCSHGGLVDMGLQYFHSM 651



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/430 (21%), Positives = 198/430 (46%), Gaps = 41/430 (9%)

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
           + S + +  +LK+L  G+ IHS  +K+G  D + + N+L+++YSKC  +E A + FD + 
Sbjct: 22  VCSKVVSLCNLKSLKEGVCIHSPIIKLGLQDHLYLNNNLLSLYSKCFSVEHARQFFDEMP 81

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI-------------- 436
            +DV SW  +++ + +     +A ++F  M  S   PN  T++ ++              
Sbjct: 82  CRDVVSWTGILSAHIKNERHEEALDIFDFMVLSGPYPNAFTFSSILRSCFALGDFSYGKR 141

Query: 437 --SGYIQNGNEDEA------VDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQ 480
             +  I++G E         +DL+ R    +   +        +T SW ++IA   Q G+
Sbjct: 142 IHASSIKHGFESNQILGSSLIDLYSRFDSTEDACKLFSYMDSGDTVSWTTVIASCVQAGK 201

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
            ++AL ++ +M  +    N  T + +L A ++ +     K IH   +   ++ +L +  +
Sbjct: 202 CSHALRIYMEMLEAQVSSNEFTFVRLLAASSF-IGLQYGKLIHAHAIVLGVKLNLVLKTA 260

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           L++ Y++   I  +  +       D+I W ++I G   +  +  A+  F +M+  G+  +
Sbjct: 261 LVNMYSRCQRIEDAIKVSKLTPEYDVILWTAIISGLAQNMKFQEAVAAFHKMEISGVSAS 320

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSI--TECYQIIPMIEHYSAMIDLYGR-SGKLEEAM 657
             T+LS++        +DLG+++   +  T     +P+    +A++D+Y + S  +E  +
Sbjct: 321 NFTYLSMLSVCISILSLDLGRQIHSRVIRTGLEDDVPV---GNALVDMYMKCSCIVEHGL 377

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHG--NIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
                +   P+   W +L+     HG     L +    R   ++P    +  ++L++ + 
Sbjct: 378 RMFRGIK-SPNVISWTSLIAGFAEHGFQQDSLNLFMEMRTVGVQPNSFTLS-IVLRVCSA 435

Query: 716 CGKPEDALKV 725
              P   LK+
Sbjct: 436 IKSPYQTLKL 445


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 227/806 (28%), Positives = 384/806 (47%), Gaps = 89/806 (11%)

Query: 90   DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
            +V++ T LL +Y   G + DA+ +F +M ERN+ +W+A++ A S +    E +  +  M 
Sbjct: 380  NVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMR 439

Query: 150  QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            +DG+  +   F  ++  CG+  +   G  + S VI  G+     V NS++ ++   G++ 
Sbjct: 440  RDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVH 499

Query: 210  WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-------------------- 249
             A + F+ M+E D ++WN+MIS Y   G   +   +F  M                    
Sbjct: 500  DAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCA 559

Query: 250  ---------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                            R  +   V   N L+  Y+  G+   A  +   M       D+ 
Sbjct: 560  SSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSR----RDLI 615

Query: 295  TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
            +W  MIS + QN  ++ AL    ++      PN +T +SA+ AC+   AL  G  +H++ 
Sbjct: 616  SWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIV 675

Query: 355  VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
            +++    ++LVGNSLI MY KC  +E AE+VF  +   D+ S+N +I GY       KA 
Sbjct: 676  LQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAM 735

Query: 415  ELFIKMQESDVPPNVITW------------------------------------NVLISG 438
            ++F  M+ + + PN IT                                     N LI+ 
Sbjct: 736  QVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITM 795

Query: 439  YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
            Y + GN + + ++F     N    +N  SWN++IA   QLG    AL +F  MQ +    
Sbjct: 796  YAKCGNLESSTNIF-----NSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKL 850

Query: 499  NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
            + V +   L +CA L +  +  ++HG  ++  L+S   V+N+ +D Y K G +     + 
Sbjct: 851  DRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVV 910

Query: 559  DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
               + +    WN+LI GY  +G++  A + F QM + G KP+  TF++++ A S AG+VD
Sbjct: 911  PDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVD 970

Query: 619  LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
             G   + S+   + + P I+H   ++DL GR G+  EA +FIE+MP+ P+  IW +LL++
Sbjct: 971  KGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSS 1030

Query: 679  CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
             R H N+++     ++L +L+P D     L+  +YA   +  D  K+R   +        
Sbjct: 1031 SRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRP 1090

Query: 739  GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKE 793
               W+++KN V TF  G     +++ +Y+ L  +          A +S +    +EE+KE
Sbjct: 1091 ACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYIADTSSALHDTDEEQKE 1150

Query: 794  EISGIHSEKLALAFALI----GSSQA 815
            +    HSEKLALA+ LI    GS+Q 
Sbjct: 1151 QNLWNHSEKLALAYGLIVVPEGSTQG 1176



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 168/658 (25%), Positives = 286/658 (43%), Gaps = 109/658 (16%)

Query: 112 EVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG 171
            +F++M +R   TW   +    R     +  E+   M + G+    F    ++ AC   G
Sbjct: 298 HLFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRG 357

Query: 172 DFEA---GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
             E    G  +H+L  + G+     +  ++L +Y   G +  A+R F  M E++ V+W +
Sbjct: 358 RDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTA 417

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------------------------- 261
           ++      G  +EA R + +M R+ +      F                           
Sbjct: 418 LMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSG 477

Query: 262 --------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
                   N LI  +  LG+   A ++  RME      D  +W  MIS ++  G  S+  
Sbjct: 478 LQNQVSVANSLITMFGNLGRVHDAEKLFDRMEE----HDTISWNAMISMYSHQGICSKCF 533

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
            +F +M   G+ P+  T+ S +S C      + G  IHSL ++      V V N+L+NMY
Sbjct: 534 LVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMY 593

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW- 432
           S   +L  AE +F  +  +D+ SWN+MI+ Y Q      A +   ++  ++  PN +T+ 
Sbjct: 594 SAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFS 653

Query: 433 ----------------------------------NVLISGYIQNGNEDEAVDLFQRMGKN 458
                                             N LI+ Y +  + ++A  +FQ M  +
Sbjct: 654 SALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH 713

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
           D V     S+N LI GY  L     A+ VF  M+S+   PN +T++++  + A   +SN 
Sbjct: 714 DIV-----SYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFA---SSND 765

Query: 519 V----KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
           +    + +H  ++R    S   V NSLI  YAK GN+  S  IF+ +++K+I++WN++I 
Sbjct: 766 LHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIA 825

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
             V  G    AL LF  M+  G K +R     + LA  L+    L      S+ E  Q+ 
Sbjct: 826 ANVQLGHGEEALKLFIDMQHAGNKLDR-----VCLAECLSSCASLA-----SLEEGMQLH 875

Query: 635 PM-------IEHY--SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
            +        + Y  +A +D+YG+ GK++E ++ + D  I P    W  L++    +G
Sbjct: 876 GLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQ-QCWNTLISGYAKYG 932



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 5/86 (5%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL---KALAM 346
           TP   TW   +SG  + GR   A ++ + M   GV  +G  + S ++AC      + +A 
Sbjct: 84  TPS--TWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIAC 141

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINM 372
           G  IH+L  + G   +V +G +L+++
Sbjct: 142 GAAIHALTHRAGLMGNVYIGRALLHL 167



 Score = 40.8 bits (94), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 3/100 (3%)

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE---RVFDMIKDKDVYSWNSMIAGYCQ 406
           IH LAV++         N+L+  Y +  +  AA     +FD + D+   +W + ++G  +
Sbjct: 38  IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
            G  G A+E+   M+E  VP +      L++   + G ++
Sbjct: 98  CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDE 137


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 214/649 (32%), Positives = 333/649 (51%), Gaps = 49/649 (7%)

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
           FN LI  Y + G  + A+ +         T  + TWT +I+  +      QAL LF +M 
Sbjct: 180 FNNLINLYAKCGCLNQALLLFSITHHHFKT--IVTWTSLITHLSHFNMHLQALSLFNQMR 237

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
             G  PN  T +S +SA      +  G ++HSL  K GF  ++ VG +L++MY+KC ++ 
Sbjct: 238 CSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMH 297

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK-MQESDVPPNVITWNVLIS-- 437
           +A RVFD + ++++ SWNSMI G+       +A  +F   ++E  V PN ++ + ++S  
Sbjct: 298 SAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSAC 357

Query: 438 ---GYIQNGNE------------------------------DEAVDLFQRMGKNDKVKRN 464
              G +  G +                              DE V LFQ +G  D V   
Sbjct: 358 ANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVV--- 414

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             +WN L+ G+ Q  +   A   F  M+     P+  +  +VL + A L A ++   IH 
Sbjct: 415 --TWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHD 472

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
            +++     ++ ++ SLI  YAK G++V +  +F+G+   ++I+W ++I  Y LHG  + 
Sbjct: 473 QIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQ 532

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMI 644
            ++LF+ M S G++P+  TF+ ++ A S  G V+ G   F S+ + + + P  EHY+ M+
Sbjct: 533 VIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMV 592

Query: 645 DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVL 704
           DL GR+G L+EA  FIE MP++P  S+W ALL ACR +GN+ +   A ERLF++EP +  
Sbjct: 593 DLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPG 652

Query: 705 IQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDL 764
              L+  +    G+ E+A +VR+L   N  R   G  WI+VKN+ + F     S S SD 
Sbjct: 653 NYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDE 712

Query: 765 LYSW-----LQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTI 819
           +Y            +   A +      +EE E+E+    HSEKLALAF L+ +      I
Sbjct: 713 IYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLL-TLPIDSPI 771

Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           RI KN+R C HCH   K  S +   EI + D    H F +G CSCGDYW
Sbjct: 772 RIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 820



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 204/433 (47%), Gaps = 39/433 (9%)

Query: 62  NLLQACIDSNSIHLARKLHA--FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
           +LL   I + S+  A ++H    +N  T +  F+   L+++YAKCGCL+ A  +F     
Sbjct: 147 HLLNTAIQTRSLKHATQIHTQIIINNYTSLP-FLFNNLINLYAKCGCLNQALLLFSITHH 205

Query: 120 --RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             + + TW+++I   S      + + LF  M   G +P+ F F  IL A         G+
Sbjct: 206 HFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQ 265

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +HSL+ K G      V  +++ +Y KC  +  A R F+ M E++ V+WNSMI G+F   
Sbjct: 266 QLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNN 325

Query: 238 ENDEAHRLFDKMCREE--------------------------------IKLGVVTFNILI 265
             D A  +F  + RE+                                +K G+V    ++
Sbjct: 326 LYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVM 385

Query: 266 RSY-NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
            S  +   +C    E VK  + +G   DV TW  ++ GF QN +  +A + F  M   G+
Sbjct: 386 NSLMDMYFKCRFFDEGVKLFQCVG-DRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGI 444

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
           +P+  + ++ + +   L AL  G  IH   +K+G+  ++ +  SLI MY+KC  L  A +
Sbjct: 445 LPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQ 504

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           VF+ I+D +V SW +MI+ Y   G   +  ELF  M    + P+ +T+  ++S     G 
Sbjct: 505 VFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGR 564

Query: 445 EDEAVDLFQRMGK 457
            +E +  F  M K
Sbjct: 565 VEEGLAHFNSMKK 577



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 217/467 (46%), Gaps = 42/467 (8%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLL 98
           +A+++ + +   G    + T+ ++L A   +  +   ++LH+ ++    + ++FV T L+
Sbjct: 228 QALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALV 287

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF-LMVQDGLFPDD 157
            +YAKC  +  A  VF+ M ERNL +W++MI  +  +  +   V +F  ++ +  + P++
Sbjct: 288 DMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNE 347

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
                +L AC N G    G+ +H +V+K G+  +  V NS++ +Y KC       + F+ 
Sbjct: 348 VSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQC 407

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD-- 275
           + ++D V WN ++ G+ Q  + +EA   F  M RE I     +F+ ++ S   L      
Sbjct: 408 VGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQG 467

Query: 276 -------VAMEMVKRMESLG--IT--------------------PDVFTWTCMISGFAQN 306
                  + +  VK M  LG  IT                     +V +WT MIS +  +
Sbjct: 468 TAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLH 527

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           G  +Q ++LF+ M   G+ P+ VT    +SAC+    +  G+   +   K+    D+  G
Sbjct: 528 GCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKI---HDMNPG 584

Query: 367 NS----LINMYSKCEELEAAERVFDMIKDKDVYS-WNSMIAGYCQAGYCGKAYELFIKMQ 421
                 ++++  +   L+ A+R  + +  K   S W +++    + G      E   ++ 
Sbjct: 585 PEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLF 644

Query: 422 ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           E + P N   + +L +   ++G  +EA ++ + MG N   K    SW
Sbjct: 645 EME-PYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSW 690



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 192/443 (43%), Gaps = 83/443 (18%)

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD--K 392
           ++     ++L    +IH+  +   +T    + N+LIN+Y+KC  L  A  +F +     K
Sbjct: 149 LNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFK 208

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-------------- 438
            + +W S+I          +A  LF +M+ S   PN  T++ ++S               
Sbjct: 209 TIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLH 268

Query: 439 ---------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
                                Y +  +   AV +F +M      +RN  SWNS+I G+  
Sbjct: 269 SLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMP-----ERNLVSWNSMIVGFFH 323

Query: 478 LGQKNNALGVFRK-MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
               + A+GVF+  ++     PN V++ SVL ACA +   N  +++HG V++  L     
Sbjct: 324 NNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTY 383

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           VMNSL+D Y K         +F  +  +D++TWN L+ G+V +  +  A + F  M+  G
Sbjct: 384 VMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREG 443

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGK--------------KVFC-------------SITE 629
           + P+  +F +++  HS A +  L +              K  C             S+ +
Sbjct: 444 ILPDEASFSTVL--HSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVD 501

Query: 630 CYQIIPMIEHY-----SAMIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLTACRI 681
            YQ+   IE +     +AMI  Y   G   + +E  E M    IEP    +  +L+AC  
Sbjct: 502 AYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSH 561

Query: 682 HGNIDLAVL---AIERLFDLEPG 701
            G ++  +    +++++ D+ PG
Sbjct: 562 TGRVEEGLAHFNSMKKIHDMNPG 584



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 165/356 (46%), Gaps = 11/356 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYIN-LLQACIDSNSIHLARKLHAFLNLVTEIDV-F 92
           N   + A+ V   +  +   +     ++ +L AC +   ++  R++H  +     + + +
Sbjct: 324 NNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTY 383

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V   L+ +Y KC   D+  ++F+ + +R++ TW+ ++  + ++ ++ E    F++M ++G
Sbjct: 384 VMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREG 443

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + PD+  F  +L +  +      G  +H  +IKLG      +  S++ +Y KCG L+ A 
Sbjct: 444 ILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAY 503

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + FE +++ + ++W +MIS Y   G  ++   LF+ M  E I+   VTF  ++ + +  G
Sbjct: 504 QVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTG 563

Query: 273 QCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           + +  +     M+ +  + P    + CM+    + G   +A    + M    + P     
Sbjct: 564 RVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMP---MKPTPSVW 620

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS--LINMYSKCEELEAAERV 385
            + + AC     L MG E      +M   +    GN   L NM ++   LE A  V
Sbjct: 621 GALLGACRKYGNLKMGREAAERLFEM---EPYNPGNYVLLANMCTRSGRLEEANEV 673


>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Vitis vinifera]
          Length = 631

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 205/584 (35%), Positives = 317/584 (54%), Gaps = 32/584 (5%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGME 349
           P+ F++  +I   +++     AL +F EM     V PN  T  S   AC   + L  G +
Sbjct: 74  PNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQ 133

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H LAVK G   D  V ++++ MY  C  +E A R+F          +  +    C    
Sbjct: 134 VHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLF----------YRRVFVDGCDG-- 181

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
                   I+ ++  V  +V+ WNV+I GY++ G  + A +LF  M +     R+  SWN
Sbjct: 182 --------IRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQ-----RSVVSWN 228

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
            +IAGY Q G    A+ VFR+MQ +   PN VT++SVLPA + L A    K +H   +R 
Sbjct: 229 VMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRN 288

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
           ++     + ++LID YAK G+I  +  +F+G+  ++++TW+++I G  +HG     LD F
Sbjct: 289 NIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHF 348

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
           + M+  G+ P+  T++ ++ A S AG+V+ G+  F  +     + P IEHY  M+DL GR
Sbjct: 349 EDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGR 408

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +G LEE+ E I +MPI+PD  IW+ALL AC++HGN+++     E L +L P D      +
Sbjct: 409 AGLLEESEELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVAL 468

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             IYA  G  E   KVR + +E   R   G  WIE+  +++ F+    S   S  ++S L
Sbjct: 469 SNIYASLGNWEGVAKVRLMMKEMDVRKDPGCSWIELDGVIHEFLVEDDSHPKSKKIHSML 528

Query: 770 QNVPEN---VTARSSHSGLC--IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
           Q +  N   V  R + + +   ++EE+KE     HSEK+A+AF LI S+Q    +RI KN
Sbjct: 529 QEMSRNLILVGYRPNTTQVLTNMDEEDKESSLNYHSEKIAIAFGLI-STQPQTPLRITKN 587

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +R+C  CH + K +S ++  +I + D K  HHF NG CSC DYW
Sbjct: 588 LRICEDCHSSIKLISKIYKRKIIVRDRKRFHHFVNGSCSCMDYW 631



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 191/383 (49%), Gaps = 28/383 (7%)

Query: 77  RKLHAFLNLVTEI-DVFVKTKLL--SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYS 133
           ++LHA +    +I D     +LL  S  +    LD AR++F  M   N ++++ +I A S
Sbjct: 28  KQLHAQMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALS 87

Query: 134 RDQRWREVVELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR 192
                 + + +F  MV+D  + P+ F FP + +ACG       G+ +H L +K G+    
Sbjct: 88  ESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDE 147

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
            V ++V+ +Y+ CG +  A R F      DG             G  D+  R        
Sbjct: 148 FVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCD-----------GIRDKKRR-------- 188

Query: 253 EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
            +   VV +N++I  Y ++G+ +VA  +   M        V +W  MI+G+AQ+G   +A
Sbjct: 189 -VDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRS----VVSWNVMIAGYAQSGHFKEA 243

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
           +++F+EM    V PN VT+ S + A + L AL +G  +H  AV+     D ++G++LI+M
Sbjct: 244 VEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDM 303

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y+KC  +E A +VF+ +  ++V +W+++IAG    G      + F  M+ + V P+ +T+
Sbjct: 304 YAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTY 363

Query: 433 NVLISGYIQNGNEDEAVDLFQRM 455
             L+S     G  +E    F  M
Sbjct: 364 IGLLSACSHAGLVNEGRWFFDHM 386



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 145/308 (47%), Gaps = 9/308 (2%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DV +   ++  Y + G L+ AR +F++M +R++ +W+ MI  Y++   ++E VE+F  M 
Sbjct: 192 DVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQ 251

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
              + P+      +L A    G  E GK +H   ++  +     + ++++ +Y KCG + 
Sbjct: 252 MAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIE 311

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A + FE + +++ V W+++I+G    G   +    F+ M R  +    VT+  L+ + +
Sbjct: 312 KALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMPSDVTYIGLLSACS 371

Query: 270 QLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
             G  +        M  + G+ P +  + CM+    + G   ++ +L   M    + P+ 
Sbjct: 372 HAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILNMP---IKPDD 428

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN--SLINMYSKCEELEAAERVF 386
           V   + + AC     + MG  +    +++   D    G+  +L N+Y+     E   +V 
Sbjct: 429 VIWKALLGACKMHGNVEMGKRVAEHLMELAPHDS---GSYVALSNIYASLGNWEGVAKVR 485

Query: 387 DMIKDKDV 394
            M+K+ DV
Sbjct: 486 LMMKEMDV 493



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 77/146 (52%), Gaps = 5/146 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDV 91
           +G   EA+ V   +  Q A+V  N  T +++L A     ++ L + +H + +     +D 
Sbjct: 237 SGHFKEAVEVFREM--QMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDD 294

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            + + L+ +YAKCG ++ A +VFE + +RN+ TWS +I   +   R ++ ++ F  M + 
Sbjct: 295 VLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHFEDMERA 354

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGK 177
           G+ P D  +  +L AC + G    G+
Sbjct: 355 GVMPSDVTYIGLLSACSHAGLVNEGR 380


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 237/745 (31%), Positives = 362/745 (48%), Gaps = 86/745 (11%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N++L+++V+ G L+ A   F  M++++  +WN ++ GY + G  DEA  L+ +M    +K
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVK 204

Query: 256 LGVVTF-----------------------------------NILIRSYNQLGQCDVAMEM 280
             V TF                                   N LI  Y + G  + A  +
Sbjct: 205 PDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLV 264

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
             +M +     D  +W  MISG+ +NG   + L LF  M    V P+ +T+TS I+AC  
Sbjct: 265 FDKMPNR----DRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACEL 320

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
           L    +G +IH   ++  F  D  + NSLI MYS    +E AE VF   + +D+ SW +M
Sbjct: 321 LGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAM 380

Query: 401 IAGYCQAGYCGKAYELFIKMQESDVPPNVIT----------------------------- 431
           I+GY       KA E +  M+   + P+ IT                             
Sbjct: 381 ISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGL 440

Query: 432 ------WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL 485
                  N LI  Y +    D+A+++F        +++N  SW S+I G +   +   AL
Sbjct: 441 VSYSIVANSLIDMYAKCKCIDKALEIFH-----STLEKNIVSWTSIILGLRINNRCFEAL 495

Query: 486 GVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
             FR+M      PN VT++ VL ACA + A    KEIH   LR  +     + N+++D Y
Sbjct: 496 FFFREMIRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMY 554

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
            + G + Y+   F  +   ++ +WN L+ GY   G    A +LF +M    + PN  TF+
Sbjct: 555 VRCGRMEYAWKQFFSVD-HEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFI 613

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
           SI+ A S +GMV  G + F S+   Y I+P ++HY+ ++DL GRSGKLEEA EFI+ MP+
Sbjct: 614 SILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPM 673

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
           +PD ++W ALL +CRIH +++L  LA E +F  +   V    L+  +YA  GK +   +V
Sbjct: 674 KPDPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEV 733

Query: 726 RKLERENTRRNSFGQCWIEVKNLVYTFVTGG----WSESYSDLLYSWLQNVPENVTARSS 781
           RK+ R+N      G  W+EVK  V+ F++        +  + LL  + + + E       
Sbjct: 734 RKMMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAGVEGPE 793

Query: 782 HSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMM 841
            S + I E  K +I   HSE+LA+ F LI S      I + KN+ MC  CH   K++S  
Sbjct: 794 SSHMDIMEASKADIFCGHSERLAIVFGLINSGPG-MPIWVTKNLYMCQSCHNIVKFISRE 852

Query: 842 HHCEIFLADSKCLHHFKNGQCSCGD 866
              EI + D++  HHFK G CSC D
Sbjct: 853 VRREISVRDAEQFHHFKGGICSCTD 877



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 172/626 (27%), Positives = 303/626 (48%), Gaps = 75/626 (11%)

Query: 21  NPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH 80
           NP   ++H+  LC  G L+ A++ LDS+      V  + Y+ L++ C    +     +++
Sbjct: 73  NP---NSHIYQLCLLGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVY 129

Query: 81  AFLNL-VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
           +++++ ++ + + +   LLS++ + G L DA  VF  M +RNL++W+ ++G Y++   + 
Sbjct: 130 SYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFD 189

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E ++L+  M+  G+ PD + FP +L+ CG   +   G+ +H  VI+ G      V N+++
Sbjct: 190 EALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALI 249

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +YVKCG +  AR  F+ M  +D ++WN+MISGYF+ G   E  RLF  M +  +   ++
Sbjct: 250 TMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLM 309

Query: 260 TF-----------------------------------NILIRSYNQLGQCDVAMEMVKRM 284
           T                                    N LI  Y+ +G  + A  +  R 
Sbjct: 310 TMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRT 369

Query: 285 ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
           E      D+ +WT MISG+       +AL+ +K M   G+MP+ +TI   +SAC+ L  L
Sbjct: 370 E----CRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNL 425

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
            MGM +H +A + G     +V NSLI+MY+KC+ ++ A  +F    +K++ SW S+I G 
Sbjct: 426 DMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGL 485

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-----GYIQNGNEDEA----------- 448
                C +A   F +M    + PN +T   ++S     G +  G E  A           
Sbjct: 486 RINNRCFEALFFFREMIRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDG 544

Query: 449 ------VDLFQRMGKND-------KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
                 +D++ R G+ +        V     SWN L+ GY + G+  +A  +F++M  S 
Sbjct: 545 FMPNAILDMYVRCGRMEYAWKQFFSVDHEVTSWNILLTGYAERGKGAHATELFQRMVESN 604

Query: 496 FYPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
             PN VT +S+L AC+   + +  ++  +    + S+  +L     ++D   +SG +  +
Sbjct: 605 VSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEA 664

Query: 555 RTIFDGMSSK-DIITWNSLICGYVLH 579
                 M  K D   W +L+    +H
Sbjct: 665 YEFIQKMPMKPDPAVWGALLNSCRIH 690


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 200/631 (31%), Positives = 325/631 (51%), Gaps = 59/631 (9%)

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
           K M +L  TP    W   +   A+  +  QAL L+ +M   G  PN  T   A+ +C  L
Sbjct: 8   KSMNALS-TP----WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAAL 62

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD--MIKDKDVYSWNS 399
               +G + H    K+G   +  V   LI+MY K   ++ A +VF+      K    +N+
Sbjct: 63  SLPILGSQFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNA 122

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------------------------- 432
           +++GY     C +A  LF +M E  VP N +T                            
Sbjct: 123 LVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYG 182

Query: 433 --------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
                   N  I+ Y++ G+ + A  LF  M       +   SWN++++GY Q G   N 
Sbjct: 183 FDSDVSVVNCFITMYMKCGSVNYAQKLFDEM-----PVKGLISWNAMVSGYAQNGLATNV 237

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           L ++R M  +  +P+ VT++ VL +CA L A +   E+   +      S+  + N+LI+ 
Sbjct: 238 LELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINM 297

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           YA+ GN+  ++ +FDGM  + +++W ++I GY +HG    A+ LF +M   G++P+   F
Sbjct: 298 YARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAF 357

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           + ++ A S AG+ D G + F  +   YQ+ P  EHYS M+DL GR+G+L+EA   IE MP
Sbjct: 358 VCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMP 417

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
           I+PD ++W ALL AC+IH N++LA LA ER+ +LEP ++    L+  IY+     +  L+
Sbjct: 418 IKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLR 477

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSG 784
           +R + +E   +   G  ++E+K  V+ F+ G  +   SD +Y  L+ +   +        
Sbjct: 478 IRIMMKEKKLKKDPGCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKP- 536

Query: 785 LCIEEEEKEEIS-------GIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKY 837
              E++ +EE +       G+HSEKLA+AF L+ ++     + I+KN+R+C  CH   K 
Sbjct: 537 ---EKDNREESNKDGFTRVGVHSEKLAVAFGLLNTTTGAEVV-IIKNLRICEDCHLFFKM 592

Query: 838 VSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           VS + H ++ + D+   HHF+NG CSC DYW
Sbjct: 593 VSKIVHRQLTVRDATRFHHFRNGSCSCKDYW 623



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 193/423 (45%), Gaps = 44/423 (10%)

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           W+  +   ++  ++ + + L+  M++ G  P+ F FP  L++C        G   H  + 
Sbjct: 17  WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 76

Query: 185 KLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES--MDEKDGVAWNSMISGYFQIGENDEA 242
           K+G      V+  ++++Y K   +  AR+ FE      K  V +N+++SGY    +  EA
Sbjct: 77  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEA 136

Query: 243 HRLFDKMCREEIKLGVVTF-----------------------------------NILIRS 267
             LF +M  E + +  VT                                    N  I  
Sbjct: 137 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 196

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           Y + G  + A ++   M   G+     +W  M+SG+AQNG  +  L+L++ M   GV P+
Sbjct: 197 YMKCGSVNYAQKLFDEMPVKGL----ISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPD 252

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            VT+   +S+C +L A ++G E+       GFT +  + N+LINMY++C  L  A+ VFD
Sbjct: 253 PVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFD 312

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
            + ++ + SW ++I GY   G+   A +LF +M  S + P+   +  ++S     G  D+
Sbjct: 313 GMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQ 372

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
            ++ F+ M +N +++     ++ ++    + G+   A  +   M      P+     ++L
Sbjct: 373 GLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMP---IKPDGAVWGALL 429

Query: 508 PAC 510
            AC
Sbjct: 430 GAC 432



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 177/367 (48%), Gaps = 16/367 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFV 93
           N + +EA+ +   +  +G  V   T + L+ AC+   ++ L   LH + L    + DV V
Sbjct: 130 NSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 189

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
               +++Y KCG ++ A+++F++M  + L +W+AM+  Y+++     V+EL+  M  +G+
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD      +L +C N G    G  +   +   G +    + N+++ +Y +CG L  A+ 
Sbjct: 250 HPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQA 309

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M E+  V+W ++I GY   G  + A +LF +M R  I+     F  ++ + +  G 
Sbjct: 310 VFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGL 369

Query: 274 CDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            D  +E  K M+ +  + P    ++CM+    + GR  +A  L + M    + P+G    
Sbjct: 370 TDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMP---IKPDGAVWG 426

Query: 333 SAISAC-----TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
           + + AC      +L  LA    I      +G+   VL    L N+YS     +   R+  
Sbjct: 427 ALLGACKIHKNVELAELAFERVIELEPENIGYY--VL----LSNIYSNANNSKGVLRIRI 480

Query: 388 MIKDKDV 394
           M+K+K +
Sbjct: 481 MMKEKKL 487



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 113/480 (23%), Positives = 213/480 (44%), Gaps = 44/480 (9%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T L  L    +  +A+++   +   G +    T+   L++C   +   L  + H  +  
Sbjct: 18  NTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITK 77

Query: 86  VTEI-DVFVKTKLLSVYAKCGCLDDAREVFED-MRERNLYT-WSAMIGAYSRDQRWREVV 142
           V  + + FV+T L+S+Y K   +D+AR+VFE+    R L   ++A++  Y  + +  E V
Sbjct: 78  VGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSEAV 137

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
            LF  M ++G+  +      ++ AC +  + E G  +H   +K G      V N  + +Y
Sbjct: 138 LLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMY 197

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
           +KCG + +A++ F+ M  K  ++WN+M+SGY Q G       L+  M    +    VT  
Sbjct: 198 MKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLV 257

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVF---------------------------- 294
            ++ S   LG   V  E+  ++++ G T + F                            
Sbjct: 258 GVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPER 317

Query: 295 ---TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
              +WT +I G+  +G    A+ LFKEM   G+ P+G      +SAC+       G+E  
Sbjct: 318 TLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYF 377

Query: 352 SLAVKMGFTDDVLVG----NSLINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIAGYCQ 406
            +   M     +  G    + ++++  +   L+ A+ + + +  K D   W +++ G C+
Sbjct: 378 KM---MKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALL-GACK 433

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                +  EL  + +  ++ P  I + VL+S    N N  + V   + M K  K+K++  
Sbjct: 434 IHKNVELAELAFE-RVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPG 492


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 208/629 (33%), Positives = 328/629 (52%), Gaps = 49/629 (7%)

Query: 283 RMESLGITP--DVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACT 339
           R+  LG  P     ++  +I  F + G    AL LF EM     V P+  T+ + + +C+
Sbjct: 123 RLFRLGPHPPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCS 182

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
            +  L++G  + + A K GF  D  V NSLI+MY+ C ++ AA  +F  ++ K V +WN+
Sbjct: 183 RMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNA 242

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVIT------------------W--------- 432
           MIAGY + G   +  E+F  M E   P + +T                  W         
Sbjct: 243 MIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKG 302

Query: 433 --------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
                     L+  Y + G  D+A  LF RM   D V     +W+++I+GY Q  +   A
Sbjct: 303 MLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVV-----AWSAMISGYTQSDRCREA 357

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           L +F +MQ +   PN VT++SVL ACA L A    K +H  + R+ L  ++ +  +L+D 
Sbjct: 358 LAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDF 417

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           YAK G I  +   F+ M  ++  TW +LI G   +G    AL+LF  M    ++P   TF
Sbjct: 418 YAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTF 477

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           + ++LA S   +V+ G++ F S+T+ Y I P IEHY  M+DL GR+G ++EA +FI +MP
Sbjct: 478 IGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMP 537

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
           IEP++ +W ALL+AC +H N+++   A++++  L+P       L+   YA  G+ ++A  
Sbjct: 538 IEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAM 597

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT-----AR 779
           VRK  +E       G   IE++  ++ F            +Y  +  + EN+        
Sbjct: 598 VRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPN 657

Query: 780 SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVS 839
           ++ + L ++E EK+     HSEKLA+AF L+ S     TIR+ KN+R+C+ CH   K +S
Sbjct: 658 TADARLDVDEYEKQVSVSHHSEKLAIAFGLMKSRPGA-TIRLSKNLRVCIDCHSATKLIS 716

Query: 840 MMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +++ EI + D    HHFK+G CSC DYW
Sbjct: 717 KVYNREIIVRDRNRFHHFKDGLCSCNDYW 745



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 186/427 (43%), Gaps = 43/427 (10%)

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKL 178
           R+  +++ +I ++ R     + + LF  M+ D  + PD       +++C    D   G+ 
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           + +   K G    + V NS++ +Y  CG ++ A   F ++  K  +AWN+MI+GY + G+
Sbjct: 193 VQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGD 252

Query: 239 NDEAHRLFDKMCREEIKLGVVTF-----------------------------------NI 263
             E   +F  M         VT                                      
Sbjct: 253 WKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLATA 312

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+  Y + G+ D A  +  RM S     DV  W+ MISG+ Q+ R  +AL +F EM    
Sbjct: 313 LVDMYAKCGELDKARRLFDRMHSR----DVVAWSAMISGYTQSDRCREALAIFNEMQGTE 368

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V PN VT+ S +SAC  L AL  G  +HS   +      V++G +L++ Y+KC  ++ A 
Sbjct: 369 VNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAV 428

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
           + F+ +  ++ ++W ++I G    G   +A ELF  M E+++ P  +T+  ++       
Sbjct: 429 KAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGC 488

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
             +E    F  M ++  +      +  ++    + G  + A    R M      PN V  
Sbjct: 489 LVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMP---IEPNAVVW 545

Query: 504 LSVLPAC 510
            ++L AC
Sbjct: 546 RALLSAC 552



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 208/485 (42%), Gaps = 77/485 (15%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           ++T  N +++C     + + R + A+       +D FV   L+ +YA CG +  A  +F 
Sbjct: 171 QHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFH 230

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            ++ + +  W+AMI  Y ++  W+EVVE+F  M++     D+     +  ACG  GD   
Sbjct: 231 TVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANL 290

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G+ +     + GM   R +  +++ +Y KCG+L  ARR F+ M  +D VAW++MISGY Q
Sbjct: 291 GQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQ 350

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG----------------------- 272
                EA  +F++M   E+    VT   ++ +   LG                       
Sbjct: 351 SDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVIL 410

Query: 273 ---------QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
                    +C    + VK  ES+ +  + +TWT +I G A NGR+ +AL+LF  M    
Sbjct: 411 GTALVDFYAKCGCIKDAVKAFESMPVR-NTWTWTALIKGMASNGRSREALELFSSMLEAN 469

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG---FTDDVLVGNSLINMYSKCEELE 380
           + P  VT    + AC+           H   V+ G   FT       S+   Y  C  +E
Sbjct: 470 IEPTDVTFIGVLLACS-----------HGCLVEEGRRHFT-------SMTQDYGICPRIE 511

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
                           +  M+    +AG   +AY+    M    + PN + W  L+S   
Sbjct: 512 ---------------HYGCMVDLLGRAGLIDEAYQFIRNMP---IEPNAVVWRALLSACT 553

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF--YP 498
            + N +   +  +++   D    ++ ++  L   Y  +GQ  NA  V ++M+       P
Sbjct: 554 VHKNVEIGEEALKQIVPLDPC--HSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVEKIP 611

Query: 499 NCVTI 503
            C  I
Sbjct: 612 GCSLI 616



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 142/313 (45%), Gaps = 30/313 (9%)

Query: 37  RLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           R  EA+ + + +  QG +V  N  T +++L AC    ++   + +H+++      + V +
Sbjct: 353 RCREALAIFNEM--QGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVIL 410

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+  YAKCGC+ DA + FE M  RN +TW+A+I   + + R RE +ELF  M++  +
Sbjct: 411 GTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANI 470

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR-RVRNSVLAVYVKCGKLIWAR 212
            P D  F  +L AC +    E G+   + + +    C R      ++ +  + G +  A 
Sbjct: 471 EPTDVTFIGVLLACSHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAY 530

Query: 213 RFFESMD-EKDGVAWNSMISG-----YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           +F  +M  E + V W +++S        +IGE      +    C          + +L  
Sbjct: 531 QFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQIVPLDPCHSG------NYILLSN 584

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG-----FAQNGRTSQALDLFKE--- 318
           +Y  +GQ   A  + K M+  G+          + G     FA++    Q  +++++   
Sbjct: 585 TYASVGQWKNAAMVRKEMKEKGVEKIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHE 644

Query: 319 ----MSFVGVMPN 327
               +  VG +PN
Sbjct: 645 MIENIKMVGYIPN 657


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 199/647 (30%), Positives = 340/647 (52%), Gaps = 44/647 (6%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N LI  Y + G+  VA ++  RM    +  +V +WT ++ G  QNG   ++L LF +M  
Sbjct: 11  NDLIVMYGKCGRLGVACDVFDRM----LKRNVVSWTALMCGHIQNGNPLESLLLFSKMGL 66

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
            GV PN  T ++ + AC  L  L +G +IH + VK GF    +VGNS+I+MYSKC  +  
Sbjct: 67  SGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINE 126

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS---- 437
           A  +F+++  +++ SWN+MIAGY  AG+C KA  LF KMQE     +  T+   +     
Sbjct: 127 AACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSD 186

Query: 438 -GYIQNGNEDEA-------------------VDLFQRMGKNDKVKR--------NTASWN 469
            G I+ GN+  A                   +DL+ + GK    +R        +  SW 
Sbjct: 187 LGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWT 246

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           +LI GY Q G    ++ +FR+++ S    +   + S++   A      + K++H   ++ 
Sbjct: 247 ALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKV 306

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
                + V NS++D Y K G I  +  +F  M ++++I+W  +I GY  HG    A+ LF
Sbjct: 307 PSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLF 366

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
           D+M+    +P+  T+L+++L  S +G+V+ G++ F  +   + I   +EHY+ M+DL GR
Sbjct: 367 DEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGR 426

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +G+L+EA   ++ MP+E +  IW+ LL+ACR+HG+++L       L  L+  + +   ++
Sbjct: 427 AGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVMM 486

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             IYA  G  ++  ++R+L +    +   G+ W+E+   V+ F  G  +   ++ ++  L
Sbjct: 487 SNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDTHPLTEKIHEIL 546

Query: 770 QNVPENVTAR------SSHSGLCIEEEEKEEISGIHSEKLALAFALI--GSSQAPHTIRI 821
           + +   +           ++   +EEE K +   +HSEKLA+  AL+  G  +    IR+
Sbjct: 547 KEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCGGLEEGRKVIRV 606

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            KN+R+C  CHE  K +S +      + D+   H F++G CSC DYW
Sbjct: 607 FKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 236/494 (47%), Gaps = 39/494 (7%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D+ +   L+ +Y KCG L  A +VF+ M +RN+ +W+A++  + ++    E + LF  M 
Sbjct: 6   DLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMG 65

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             G+ P+DF F   L+ACG     + G+ +H + +K G   V  V NS++ +Y KCG++ 
Sbjct: 66  LSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRIN 125

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A   FE M  ++ ++WN+MI+GY   G  ++A  LF KM      L   TF   +++ +
Sbjct: 126 EAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACS 185

Query: 270 QLGQCDVAME---------------------------------MVKRMESLGITPDVFTW 296
            LG      +                                 M +R+ S      V +W
Sbjct: 186 DLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISW 245

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           T +I G+AQ G  +++++LF+++    +  +G  ++S +    D   +  G ++H+ A+K
Sbjct: 246 TALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIK 305

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
           +    D+ V NS+++MY KC  +  AER+F  +  ++V SW  MI GY + G   +A  L
Sbjct: 306 VPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRL 365

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F +MQ     P+ +T+  ++ G   +G  ++  + F R+     +K     +  ++    
Sbjct: 366 FDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLG 425

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           + G+   A  +   M       N     ++L AC         KE+ G +LR  L+S  P
Sbjct: 426 RAGRLKEAKNLVDSMP---LEANVGIWQTLLSACRVHGDLELGKEVGGILLR--LDSENP 480

Query: 537 VMNSLI-DTYAKSG 549
           V   ++ + YA +G
Sbjct: 481 VNYVMMSNIYADAG 494



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 195/412 (47%), Gaps = 41/412 (9%)

Query: 31  FLCG---NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT 87
            +CG   NG   E++ +   +   G K    T+   L+AC   N + + R++H  + + T
Sbjct: 44  LMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHD-ICVKT 102

Query: 88  EIDV--FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
             D+   V   ++ +Y+KCG +++A  +FE M  RNL +W+AMI  Y+      + + LF
Sbjct: 103 GFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLF 162

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM--SCVRRVRNSVLAVYV 203
             M + G F D+F F   L+AC + G  + G  +H+ +I  G   S    V  +++ +YV
Sbjct: 163 QKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYV 222

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK-------- 255
           KCGKL  ARR F  ++EK  ++W ++I GY Q G   E+  LF ++    I+        
Sbjct: 223 KCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSS 282

Query: 256 -LGVV-------------TFNILIRSYNQLGQCDVAMEM---------VKRMESLGITPD 292
            +GV               F I + S   +  C+  ++M          +R+ S     +
Sbjct: 283 MMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARN 342

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           V +WT MI+G+ ++G   +A+ LF EM      P+ VT  + +  C+    +  G E  S
Sbjct: 343 VISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFS 402

Query: 353 -LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIA 402
            L    G    V     ++++  +   L+ A+ + D M  + +V  W ++++
Sbjct: 403 RLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLS 454



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 178/365 (48%), Gaps = 12/365 (3%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDVF 92
           G   +A+ +   +   G  +   T+ + L+AC D  +I    ++HAFL     +  ++  
Sbjct: 153 GFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTA 212

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V   L+ +Y KCG L  AR VF  + E+++ +W+A+I  Y+++    E +ELF  + +  
Sbjct: 213 VAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESS 272

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           +  D F+   ++    +    + GK MH+  IK+       V NS+L +Y+KCG +  A 
Sbjct: 273 IQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAE 332

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           R F  M  ++ ++W  MI+GY + G   EA RLFD+M  +  +   VT+  ++   +  G
Sbjct: 333 RLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSG 392

Query: 273 QCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
             +   E   R+ S  GI   V  + CM+    + GR  +A +L   M    +  N    
Sbjct: 393 LVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMP---LEANVGIW 449

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDMI 389
            + +SAC     L +G E+  + +++   + V   N ++  N+Y+     +  ER+ +++
Sbjct: 450 QTLLSACRVHGDLELGKEVGGILLRLDSENPV---NYVMMSNIYADAGYWKECERIRELV 506

Query: 390 KDKDV 394
           K K +
Sbjct: 507 KSKKL 511



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 186/392 (47%), Gaps = 44/392 (11%)

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
           MGF  D+++ N LI MY KC  L  A  VFD +  ++V SW +++ G+ Q G   ++  L
Sbjct: 1   MGFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLL 60

Query: 417 FIKMQESDVPPNVITWNV------LISGY----------IQNGNE------DEAVDLFQR 454
           F KM  S V PN  T++       L++G           ++ G +      +  +D++ +
Sbjct: 61  FSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSK 120

Query: 455 MGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
            G+ ++          RN  SWN++IAGY   G    AL +F+KMQ    + +  T  S 
Sbjct: 121 CGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTST 180

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSL--PVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           L AC+ L A  +  +IH  ++      S+   V  +LID Y K G +  +R +F  +  K
Sbjct: 181 LKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEK 240

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
            +I+W +LI GY   G    +++LF Q++   ++ +     S++   +   +V  GK++ 
Sbjct: 241 HVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMH 300

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
               +    +  I   ++++D+Y + G + EA     +MP     S W  ++T    HG 
Sbjct: 301 AFAIKVPSGVD-ISVCNSILDMYLKCGMINEAERLFSEMPARNVIS-WTVMITGYGKHG- 357

Query: 685 IDLAVLAIERLFD------LEPGDVLIQRLIL 710
             L   AI RLFD       EP DV    ++L
Sbjct: 358 --LGKEAI-RLFDEMQLDSTEPDDVTYLAVLL 386


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 204/621 (32%), Positives = 318/621 (51%), Gaps = 49/621 (7%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            P+ F    M+  +A  GR+ +A+DL+  M  +GV  N  T    +  C        G  
Sbjct: 94  APNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEV 153

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H   V+ GF  D+ V  +L++MY+KC E+  A  VFD +  +DV  W +MI  Y QA  
Sbjct: 154 VHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAER 213

Query: 410 CGKAYELFIKMQESDVPPNVIT-----------------------------------WNV 434
             KA  LF KMQE     + IT                                    N 
Sbjct: 214 PLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNS 273

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           ++  Y + GN + A  +F RM +     RN  SWNS+++GY Q G+  +AL +F +MQ+S
Sbjct: 274 IVGMYAKCGNVERARLVFDRMEE-----RNGISWNSMLSGYTQNGRPTDALSLFNQMQAS 328

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              PN VT L ++ AC+YL + +  +++H  V+   ++    + N+++D Y K G++  +
Sbjct: 329 ECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTA 388

Query: 555 RTIFDG--MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
             +F+   +  +D+ +WN LI GY +HG    AL+LF +M+  G++PN  TF SI+ A S
Sbjct: 389 VEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACS 448

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
            AG++D G+K F  +T+   + P ++HY+ M+D+ GR+G L EA   I+ +P  P   +W
Sbjct: 449 HAGLIDEGRKCFADMTKL-SVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVW 507

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
            ALL ACRIHGN +L  +A   LF LEP       L+  IYA   K ++   VR+  +  
Sbjct: 508 GALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSR 567

Query: 733 TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----I 787
             +       IE    V+ F T   S  Y   +Y  ++++   +        L      +
Sbjct: 568 GLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDV 627

Query: 788 EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIF 847
           E E+KE +   HSEKLA+AF ++   Q    I++ KN+R+C  CH   K++S ++  +I 
Sbjct: 628 EPEDKEHLLNYHSEKLAVAFGIMKMDQG-MPIQVTKNLRVCSDCHWAFKFISSIYGRKII 686

Query: 848 LADSKCLHHFKNGQCSCGDYW 868
           + D    HHF+ G+CSCGDYW
Sbjct: 687 VRDGNRFHHFQGGRCSCGDYW 707



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 229/524 (43%), Gaps = 56/524 (10%)

Query: 17  TKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA 76
           T+  N    +T L      GR  EAI +   +   G  V   TY  +L+ C         
Sbjct: 92  TQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFG 151

Query: 77  RKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
             +H   +      D+FV+  L+ +YAKCG + DA EVF+ M  R++  W+AMI  Y + 
Sbjct: 152 EVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQA 211

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
           +R  + + LF  M ++G   D+     +  A G  GD      +H   +  G      V 
Sbjct: 212 ERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVG 271

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           NS++ +Y KCG +  AR  F+ M+E++G++WNSM+SGY Q G   +A  LF++M   E  
Sbjct: 272 NSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECD 331

Query: 256 LGVVTFNILIRS-----------------------------------YNQLGQCDVAMEM 280
              VT  I++ +                                   Y + G  D A+EM
Sbjct: 332 PNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEM 391

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
               E LG   DV +W  +ISG+  +G   +AL+LF  M   GV PN +T TS +SAC+ 
Sbjct: 392 FNNCE-LG-ERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSH 449

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS-WNS 399
              +  G +  +   K+    ++     +++M  +   L  A R+   I  +     W +
Sbjct: 450 AGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGA 509

Query: 400 M-----IAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQR 454
           +     I G  + G    A  LF       + P    + VL+S      N+ + V++ ++
Sbjct: 510 LLLACRIHGNTELGEIA-ANNLF------QLEPEHTGYYVLMSNIYAASNKWKEVEMVRQ 562

Query: 455 MGKNDKVKRNTA----SWNSLIAGYQQLGQKNNAL-GVFRKMQS 493
             K+  +K+  A     + + + G+    Q +     V+RK++S
Sbjct: 563 NMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYREVYRKVES 606



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 189/419 (45%), Gaps = 50/419 (11%)

Query: 335 ISACTDLKALAMGMEIHSLAVKMGF---TDDVLVGNSLINMYSKCEELEAAERVFD---- 387
           +  CT L  L +   IHS     GF   T   L    LI +YSK  +L +A  +FD    
Sbjct: 32  LQCCTSLTTLKL---IHSSLSTRGFLLHTPHFLA--RLIILYSKLGDLHSARTLFDHRHH 86

Query: 388 ----MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS------ 437
                 +  + +  N+M+  Y  AG   +A +L+I MQ   V  N  T+  ++       
Sbjct: 87  HHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASEL 146

Query: 438 ----GYIQNGN------------EDEAVDLFQRMGK--------NDKVKRNTASWNSLIA 473
               G + +G             E   VD++ + G+        +  + R+   W ++I 
Sbjct: 147 GAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMIT 206

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
            Y+Q  +   AL +FRKMQ   F  + +T +SV  A   L        +HG  +      
Sbjct: 207 LYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIG 266

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
            + V NS++  YAK GN+  +R +FD M  ++ I+WNS++ GY  +G    AL LF+QM+
Sbjct: 267 DVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQ 326

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
           +    PN  T L ++ A S  G   LG+K+   +      I      +A++D+Y + G L
Sbjct: 327 ASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLR-NAIMDMYMKCGDL 385

Query: 654 EEAMEFIEDMPI-EPDSSIWEALLTACRIHGNIDLAVLAIERLF--DLEPGDVLIQRLI 709
           + A+E   +  + E D S W  L++   +HG+   A+    R+    +EP D+    ++
Sbjct: 386 DTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSIL 444


>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 199/614 (32%), Positives = 321/614 (52%), Gaps = 47/614 (7%)

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +W   +   A+     +AL+L+ +M   G  PN  T   A  +C  L     G ++H   
Sbjct: 23  SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD--VYSWNSMIAGYCQAGYCGK 412
           +K G   +  V  SLI+MY KC  + +A +VFD           +N++IAGY        
Sbjct: 83  IKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSD 142

Query: 413 AYELFIKMQESDVPPNVITW-----------------------------------NVLIS 437
           A  LF +M++  V  N +T                                    N L++
Sbjct: 143 AVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCLLT 202

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
            Y++ G+ D A  LF  M      ++   +WN++I+GY Q G   + L ++RKM+ +   
Sbjct: 203 MYVRCGSVDFARKLFDGM-----PEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIV 257

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P+ VT++ VL +CA+L A    +E+   +       +  + N+LI+ YA+ GN+V +R I
Sbjct: 258 PDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAI 317

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           FDGM+ K++I+W ++I GY +HG    A+ LFD+M S    P+   F+S++ A S AG+ 
Sbjct: 318 FDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLT 377

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
           + G   F ++   Y + P  EHYS ++DL GR+G+LEEA + I  M +EPD ++W ALL 
Sbjct: 378 EKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLG 437

Query: 678 ACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNS 737
           AC+IH N++LA LA E++ + EP ++    L+  I++  G  E  L+VR + RE   +  
Sbjct: 438 ACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKE 497

Query: 738 FGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEI-- 795
            G  ++E +  ++ F+ G  +   +  +Y  L  + E++  R   S    +E   EE+  
Sbjct: 498 PGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGL-EDIIKRRGGSNDNDQESRNEELIT 556

Query: 796 -SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCL 854
             G+HSEKLA+AF LI +++    I ++KN+R+C  CH   K VS +   ++ + D+   
Sbjct: 557 GMGVHSEKLAIAFGLI-NTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLVVRDATRF 615

Query: 855 HHFKNGQCSCGDYW 868
           HHFKNG CSC DYW
Sbjct: 616 HHFKNGVCSCKDYW 629



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 178/367 (48%), Gaps = 16/367 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           N R ++A+ +   +  +G  V   T + L+  C     +     LHA  +    + D+ V
Sbjct: 137 NSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSV 196

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              LL++Y +CG +D AR++F+ M E+ L TW+AMI  Y+++     V++L+  M   G+
Sbjct: 197 GNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGI 256

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD      +L +C + G   AG+ +   +   G      ++N+++ +Y +CG L+ AR 
Sbjct: 257 VPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARA 316

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M EK+ ++W ++I+GY   G+ + A +LFD+M   +       F  ++ + +  G 
Sbjct: 317 IFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGL 376

Query: 274 CDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            +  +     ME   G+ P    ++C++    + GR  +A  L   MS   V P+G    
Sbjct: 377 TEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMS---VEPDGAVWG 433

Query: 333 SAISAC-----TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
           + + AC      +L  LA    I      +G+   VL    L N++S+   +E   RV  
Sbjct: 434 ALLGACKIHRNVELAELAFEKVIEFEPTNIGYY--VL----LSNIFSEAGNMEGILRVRV 487

Query: 388 MIKDKDV 394
           M++++ +
Sbjct: 488 MMRERKL 494



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 207/487 (42%), Gaps = 45/487 (9%)

Query: 17  TKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA 76
           T   N R R+     L       EA+ +   +   G      T+    ++C   +     
Sbjct: 21  TASWNARLRE-----LARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAG 75

Query: 77  RKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVF-EDMRERNLYT-WSAMIGAYS 133
            +LH   +    E + FV+T L+S+Y KC  +  AR+VF E+   RNL   ++A+I  YS
Sbjct: 76  SQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYS 135

Query: 134 RDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR 193
            + R+ + V LF  M ++G+  +      ++  C        G  +H+  ++ G+     
Sbjct: 136 LNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLS 195

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
           V N +L +YV+CG + +AR+ F+ M EK  + WN+MISGY Q G       L+ KM    
Sbjct: 196 VGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTG 255

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRME--SLGITP-------------------- 291
           I    VT   ++ S   LG      E+ +R+E    G  P                    
Sbjct: 256 IVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKAR 315

Query: 292 ---------DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
                    +V +WT +I+G+  +G+   A+ LF EM     +P+G    S +SAC+   
Sbjct: 316 AIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAG 375

Query: 343 ALAMGM-EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWNSM 400
               G+    ++    G        + ++++  +   LE A ++   M  + D   W ++
Sbjct: 376 LTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGAL 435

Query: 401 IAGYCQAGYCGKAYEL-FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           + G C+     +  EL F K+ E +  P  I + VL+S         E +   + M +  
Sbjct: 436 L-GACKIHRNVELAELAFEKVIEFE--PTNIGYYVLLSNIFSEAGNMEGILRVRVMMRER 492

Query: 460 KVKRNTA 466
           K+K+   
Sbjct: 493 KLKKEPG 499



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 10/233 (4%)

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           LF    K   ++  TASWN+ +    +      AL ++ +M +S   PN  T      +C
Sbjct: 7   LFPYANKWLDLQNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSC 66

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD-GMSSKDI-IT 568
           A L       ++HG V++   E    V  SLI  Y K   I  +R +FD    S+++ + 
Sbjct: 67  ASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVC 126

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV---FC 625
           +N+LI GY L+  +  A+ LF QM+  G+  N  T L +I     AG + LG       C
Sbjct: 127 YNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPV--CAGPIHLGFGTSLHAC 184

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           S+   + +   +   + ++ +Y R G ++ A +  + MP E     W A+++ 
Sbjct: 185 SVR--FGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMP-EKGLITWNAMISG 234


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 220/647 (34%), Positives = 326/647 (50%), Gaps = 79/647 (12%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++  W  M  G A +     AL L+  M  +G++PN  T    + AC   KA   G +I
Sbjct: 66  PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQI 125

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM---------------------- 388
           H   +K+G   D+ V  SLI MY K    E A +VFD                       
Sbjct: 126 HGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYI 185

Query: 389 ---------IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN----------- 428
                    I  KDV SWN++I+GY + G   +A ELF +M +++V P+           
Sbjct: 186 XSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSAC 245

Query: 429 -----------VITW-------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                      V +W             N LI  YI+ G  + A  LF+ +   D +   
Sbjct: 246 AQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVI--- 302

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             SWN+LI GY  +     AL +F++M  S   PN VT+LS+LPACA+L A +  + IH 
Sbjct: 303 --SWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHV 360

Query: 525 CVLRRSLESSLP--VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
            + +R    S P  +  SLID YAK G+I  ++ +FD M ++ + +WN++I G+ +HG  
Sbjct: 361 YIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRA 420

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
           + A D+F +M+  G++P+  TF+ ++ A S +GM+DLG+ +F S+TE Y+I P +EHY  
Sbjct: 421 NPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGC 480

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           MIDL G SG  +EA E I  M ++PD  IW +LL AC++HGN++L     + L  +EP +
Sbjct: 481 MIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKN 540

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGW----- 757
                L+  IYA  G+  +  K R L  +   +   G   IE+ ++V+ F+ G       
Sbjct: 541 SGSYVLLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRN 600

Query: 758 SESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
            E Y  L    +          +S     +EEE KE     HSEKLA+AF LI S++   
Sbjct: 601 REIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI-STKPGT 659

Query: 818 TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
            + IVKN+R+C +CHE  K +S ++  EI   D    HHF +G CSC
Sbjct: 660 KLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFXDGVCSC 706



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 211/469 (44%), Gaps = 75/469 (15%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A  VF+ ++E NL  W+ M   ++        + L+  M+  GL P+ + FP +L+AC  
Sbjct: 56  AISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAK 115

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
              F  G+ +H  V+KLG      V  S++A+YVK G+   AR+ F+    +D V++ ++
Sbjct: 116 SKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTAL 175

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           I GY   G    A ++FD++  ++    VV++N LI  Y + G    A+E+ K M    +
Sbjct: 176 IKGYASNGYIXSAQKMFDEIPVKD----VVSWNALISGYAETGNYKEALELFKEMMKTNV 231

Query: 290 TPDVFTWTCMIS---------------------GFAQN--------------GRTSQALD 314
            PD  T   ++S                     GF  N              G    A  
Sbjct: 232 KPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASG 291

Query: 315 LFKEMSFVGVM-------------------------------PNGVTITSAISACTDLKA 343
           LF+ +S+  V+                               PN VT+ S + AC  L A
Sbjct: 292 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGA 351

Query: 344 LAMGMEIHSLAVK--MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
           + +G  IH    K   G ++   +  SLI+MY+KC ++EAA++VFD + ++ + SWN+MI
Sbjct: 352 IDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMI 411

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
            G+   G    A+++F +M++  + P+ IT+  L+S    +G  D    +F+ M ++ K+
Sbjct: 412 FGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKI 471

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                 +  +I      G    A  +   M+     P+ V   S+L AC
Sbjct: 472 TPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMD---PDGVIWCSLLKAC 517



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 208/483 (43%), Gaps = 76/483 (15%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  LL+AC  S +    +++H   L L  ++D++V T L+++Y K G  +DAR+VF+  
Sbjct: 105 TFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQS 164

Query: 118 RERNL--YT-----------------------------WSAMIGAYSRDQRWREVVELFF 146
             R++  YT                             W+A+I  Y+    ++E +ELF 
Sbjct: 165 SHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFK 224

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M++  + PD+     +L AC      E G+ +HS +   G     ++ N+++ +Y+KCG
Sbjct: 225 EMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCG 284

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           ++  A   FE +  KD ++WN++I GY  +    EA  LF +M R       VT   ++ 
Sbjct: 285 EVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILP 344

Query: 267 SYNQLGQCDVA------------------------MEMVKRMESLGITPDVF-------- 294
           +   LG  D+                         ++M  +   +     VF        
Sbjct: 345 ACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSL 404

Query: 295 -TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HS 352
            +W  MI GFA +GR + A D+F  M   G+ P+ +T    +SAC+    L +G  I  S
Sbjct: 405 SSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRS 464

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYC- 410
           +      T  +     +I++        EA E +  M  D D   W S++      G   
Sbjct: 465 MTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVE 524

Query: 411 -GKAY-ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
            G+++ +  IK++    P N  ++ +L + Y   G  +E     +R   NDK  +     
Sbjct: 525 LGESFAQNLIKIE----PKNSGSYVLLSNIYATAGRWNEVAK--RRALLNDKGMKKVPGC 578

Query: 469 NSL 471
           +S+
Sbjct: 579 SSI 581



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 159/307 (51%), Gaps = 7/307 (2%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           G   EA+ +   +     K   +T + +L AC  S SI L R++H+++ +     ++ + 
Sbjct: 214 GNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIV 273

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+ +Y KCG ++ A  +FE +  +++ +W+ +IG Y+    ++E + LF  M++ G  
Sbjct: 274 NALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGES 333

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKL--GMSCVRRVRNSVLAVYVKCGKLIWAR 212
           P++     IL AC + G  + G+ +H  + K   G+S    +R S++ +Y KCG +  A+
Sbjct: 334 PNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQ 393

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + F+SM  +   +WN+MI G+   G  + A  +F +M ++ I+   +TF  L+ + +  G
Sbjct: 394 QVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSG 453

Query: 273 QCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
             D+   + + M E   ITP +  + CMI     +G   +A ++   M    + P+GV  
Sbjct: 454 MLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSME---MDPDGVIW 510

Query: 332 TSAISAC 338
            S + AC
Sbjct: 511 CSLLKAC 517


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  339 bits (869), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 216/711 (30%), Positives = 347/711 (48%), Gaps = 64/711 (9%)

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKD----GVAWNSMISGYFQIGENDEAHRLFDK 248
           ++ N  L    K GKL  A  F + MD+ D      ++  +     ++    +   + D+
Sbjct: 53  KLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDR 112

Query: 249 MCREEIKLGVVTFNILIRSYNQLGQCDVAMEM-VKRMESLGITPDVFTWTCMISGFAQNG 307
           + R          N L+R Y     CD    + V+++    +  ++ +W  +IS +A+NG
Sbjct: 113 LRRTVKNPSGSIENCLLRMY-----CDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNG 167

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
              +A+ LF +M   G+ PN     S + +C     L +G ++HS  ++     ++ V  
Sbjct: 168 ELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVET 227

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           ++ NMY +C  LE A+ VFD +  ++  +W  ++ GY QA     A ELF +M    V  
Sbjct: 228 AICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVEL 287

Query: 428 NVITWNVLI----------------SGYIQNGNEDEA------VDLFQRMGKNDKVKR-- 463
           +   +++++                S  ++ G E E       VD + + G  +   R  
Sbjct: 288 DEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSF 347

Query: 464 ------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASN 517
                 N  SW++LI+G+ Q G+  + + +F  ++S     N     SV  ACA     N
Sbjct: 348 GRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLN 407

Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
              + HG  ++R L S L   ++++  Y+K G + Y+R  F+ +   D + W ++I GY 
Sbjct: 408 MGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYA 467

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
            HG    AL  F +M+S+G++PN  TF++++ A S +G+V   K+   S++  Y + P I
Sbjct: 468 YHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTI 527

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
           +HY  MID Y R+G L EA+E I  MP EPD+  W++LL  C  H ++ L  +A E LF 
Sbjct: 528 DHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFR 587

Query: 698 LEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGW 757
           L+PGD     L+  +Y+  GK E+A  VRKL  E   +      WI VK  V+  V    
Sbjct: 588 LDPGDTAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRPVR--- 644

Query: 758 SESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
                      L N  ++V+        C     KE++   HSEKLA+AF LI S++   
Sbjct: 645 -----------LLNEEDDVS--------CSLPARKEQLLD-HSEKLAIAFGLI-STEDNA 683

Query: 818 TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            I + KN+R C  CHE  K VSM+   +I + DS   HHFK+G+CSC DYW
Sbjct: 684 PILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 734



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 142/525 (27%), Positives = 242/525 (46%), Gaps = 35/525 (6%)

Query: 18  KKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLAR 77
           K    +  + HL  L   G+L EA   L  +      V  ++Y  L +AC    S+   R
Sbjct: 48  KIQQGKLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGR 107

Query: 78  KLHAFLN-LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQ 136
            +H  L   V      ++  LL +Y  CG   D ++VF++M  +NL +W  +I AY+++ 
Sbjct: 108 LIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNG 167

Query: 137 RWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRN 196
              + + LF  M   G+ P+  ++  +LQ+C      E GK MHS VI+  ++    V  
Sbjct: 168 ELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVET 227

Query: 197 SVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL 256
           ++  +YV+CG L  A+  F+ MD ++ V W  ++ GY Q  + + A  LF +M  E ++L
Sbjct: 228 AICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVEL 287

Query: 257 GVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI--------------------------- 289
               F+I+++    L   D+  ++   +  LG                            
Sbjct: 288 DEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSF 347

Query: 290 ----TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
                P+  +W+ +ISGF+Q+GR    + +F  +   GV+ N    TS   AC     L 
Sbjct: 348 GRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLN 407

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
           MG + H  A+K G    +   ++++ MYSKC  L+ A R F+ I + D  +W ++I+GY 
Sbjct: 408 MGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYA 467

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
             G   +A   F +MQ   V PN +T+  +++    +G   EA      M ++  VK   
Sbjct: 468 YHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTI 527

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             ++ +I  Y + G    AL +  +M    F P+ ++  S+L  C
Sbjct: 528 DHYDCMIDTYSRAGLLXEALELINRMP---FEPDAMSWKSLLGGC 569


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  339 bits (869), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 205/645 (31%), Positives = 331/645 (51%), Gaps = 75/645 (11%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P    W  +I  +  +G   Q+L  F  M   G+ P+     S + +C  L  L +G  +
Sbjct: 69  PPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESL 128

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER-------------------------- 384
           H   +++G   D+  GN+L+NMYSK   LE + R                          
Sbjct: 129 HGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLS 188

Query: 385 ------VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
                 +F+M+ +KD+ SWN++IAG  + G   +   +  +M  +++ P+  T + ++  
Sbjct: 189 EDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPL 248

Query: 439 YIQN-----GNE-----------------DEAVDLF---QRMGKNDKV-----KRNTASW 468
             +N     G E                    +D++    R+  + +V     +R+  SW
Sbjct: 249 IAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISW 308

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           NS+IAG  Q G  +  L  FR+M  +   P   +  S++PACA+L   +  K++HG + R
Sbjct: 309 NSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 368

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
              + ++ + +SL+D YAK GNI  ++ IFD M  +D+++W ++I G  LHG    A++L
Sbjct: 369 NGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIEL 428

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F+QM++ G+K       +++ A S  G+VD   K F S+T  + I P +EHY+A+ DL G
Sbjct: 429 FEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLG 481

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+G+LEEA +FI  M I P  SIW  LL+ACR+H NID+A     R+ +++P +     L
Sbjct: 482 RAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYIL 541

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  IY+   + ++A K R   R    R +    WIEVKN VY F+ G  S    + +   
Sbjct: 542 LANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDESHPCYEKIREA 601

Query: 769 LQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
           ++ +      E     +S     +EEE+K+ +   HSE+LA+ F +I ++ A  TIR+ K
Sbjct: 602 MEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGII-NTPAGMTIRVTK 660

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+R+C  CH   K++S +   EI + D+   HHFKNG CSCGDYW
Sbjct: 661 NLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 216/480 (45%), Gaps = 75/480 (15%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           LL+  +   S   A++LHA +       +   + LLS+Y+    L D+  +F  +     
Sbjct: 12  LLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHFPPA 71

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
             W ++I  Y+      + +  F  M+  GL+PD  +FP +L++C    D   G+ +H  
Sbjct: 72  LAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGY 131

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           +I++G+       N+++ +Y K        RF E              SG  ++G    A
Sbjct: 132 IIRVGLDFDLYTGNALMNMYSKL-------RFLEE-------------SGRQRLG----A 167

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
             +FD+M   E    V T ++L            + + V+++  +    D+ +W  +I+G
Sbjct: 168 GEVFDEMT--ERTRSVRTVSVL------------SEDSVRKIFEMMPEKDLVSWNTIIAG 213

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
            A+NG   + L + +EM    + P+  T++S +    +   ++ G EIH  +++ G   D
Sbjct: 214 NARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDAD 273

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           + V +SLI+MY+KC  +  + RVF ++ ++D  SWNS+IAG  Q G   +    F +M  
Sbjct: 274 IYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLM 333

Query: 423 SDVPPNVITWNVLIS---------------GYIQNGNEDE-------AVDLFQRMGKNDK 460
           + + P   +++ ++                GYI     DE        VD++ + G    
Sbjct: 334 AKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRT 393

Query: 461 VK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
            K        R+  SW ++I G    GQ  +A+ +F +M++         I +VL AC++
Sbjct: 394 AKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETE-------GIKAVLTACSH 446



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 123/559 (22%), Positives = 219/559 (39%), Gaps = 134/559 (23%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTKLLSVYAKCGCL--------- 107
           N + ++L++C     ++L   LH ++  V  + D++    L+++Y+K   L         
Sbjct: 107 NVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLG 166

Query: 108 -----------------------DDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
                                  D  R++FE M E++L +W+ +I   +R+  + E + +
Sbjct: 167 AGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRM 226

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
              M    L PD F    +L       D   GK +H   I+ G+     V +S++ +Y K
Sbjct: 227 IREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAK 286

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--- 261
           C ++  + R F  + E+DG++WNS+I+G  Q G  DE  R F +M   +IK    +F   
Sbjct: 287 CTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSI 346

Query: 262 ---------------------------NILIRS-----YNQLGQCDVAMEMVKRMESLGI 289
                                      NI I S     Y + G    A ++  RM     
Sbjct: 347 MPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMR---- 402

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             D+ +WT MI G A +G+   A++LF++M   G       I + ++AC+          
Sbjct: 403 LRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG-------IKAVLTACS---------- 445

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
                   G  D+              +   +  R F +    + Y+  S + G  +AG 
Sbjct: 446 ------HGGLVDEAW------------KYFNSMTRDFGIAPGVEHYAAVSDLLG--RAGR 485

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
             +AY+    M    + P    W  L+S    + N D A  +  R+ + D    NT ++ 
Sbjct: 486 LEEAYDFICGMH---IGPTGSIWATLLSACRVHKNIDMAEKVANRILEVD--PNNTGAYI 540

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV--LPACAYLVASNKV------KE 521
            L           N     R+ + +  +   +  + +   PAC+++   NKV       E
Sbjct: 541 LLA----------NIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMAGDE 590

Query: 522 IHGCV--LRRSLESSLPVM 538
            H C   +R ++E  + +M
Sbjct: 591 SHPCYEKIREAMEVLVELM 609



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 145/318 (45%), Gaps = 12/318 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG   E + ++  +     K    T  ++L    ++  I   +++H   +    + D++V
Sbjct: 217 NGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYV 276

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAKC  + D+  VF  + ER+  +W+++I    ++  + E +  F  M+   +
Sbjct: 277 ASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKI 336

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P  + F  I+ AC +      GK +H  + + G      + +S++ +Y KCG +  A++
Sbjct: 337 KPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQ 396

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M  +D V+W +MI G    G+  +A  LF++M  E IK        ++ + +  G 
Sbjct: 397 IFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGL 449

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            D A +    M    GI P V  +  +     + GR  +A D    M    + P G    
Sbjct: 450 VDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMH---IGPTGSIWA 506

Query: 333 SAISACTDLKALAMGMEI 350
           + +SAC   K + M  ++
Sbjct: 507 TLLSACRVHKNIDMAEKV 524


>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  339 bits (869), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 210/637 (32%), Positives = 331/637 (51%), Gaps = 49/637 (7%)

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
           QC +A+       S G   D      +I    + G  +QAL +  +       P   T  
Sbjct: 30  QCCLALRPSTTTRSNG---DSNNNNPLIQSLCKQGNLNQALQVLSQEP----NPTQHTYE 82

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
             I +CT   +L  G+++H   +  G   D  +   LINMYS+ + ++ A +VFD  + +
Sbjct: 83  LLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRKR 142

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ---------NG 443
            +Y WN++      AGY  +  +L+ +M    VP +  T+  ++   +          NG
Sbjct: 143 TIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLNG 202

Query: 444 NEDEA-----------------VDLFQRMGKNDKVKR--------NTASWNSLIAGYQQL 478
            E                    +D++ R G      R        N  SW+++IA Y + 
Sbjct: 203 REIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSKN 262

Query: 479 GQKNNALGVFRKM--QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           G+   AL +FRKM  ++    PN VT++SVL ACA L A  + K +HG +LRR L+S LP
Sbjct: 263 GKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSILP 322

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           V+++L+  YA+ GN+     +F+ M  +D+++WNSLI  Y +HGF   A+ +F +M   G
Sbjct: 323 VVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQG 382

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           L P+  +F+S++ A S AG+V+ GK +F S+   ++I P +EHY+ M+DL GR+ +L+EA
Sbjct: 383 LSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDEA 442

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
            + I+DM IEP   +W +LL +CRIH N++LA  A  RLF+LEP +     L+  IYA  
Sbjct: 443 AKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPTNAGNYVLLADIYAEA 502

Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV 776
               +  +V+ L      +   G+  IE++  +Y+F++        + L++ L  +   +
Sbjct: 503 KMWNEVKRVKMLLEARGLQKVPGRSCIEIRRKIYSFMSVDEFNPQIEQLHALLLKLSMEM 562

Query: 777 TARSSHSGLCI-----EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHC 831
             +       +     + EEKE I   HSEKLALAF LI S +   TIRI KN+R+C  C
Sbjct: 563 KEKGYVPDTKVVLYDLDPEEKERIVLGHSEKLALAFGLINSKKG-ETIRITKNLRLCEDC 621

Query: 832 HETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           H   K++S   + EI + D    H F++G CSCGDYW
Sbjct: 622 HSVTKFISKFANREILVRDVNRFHLFQDGVCSCGDYW 658



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 198/419 (47%), Gaps = 53/419 (12%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEID 90
           LC  G LN+A+ VL    +Q     ++TY  L+ +C   NS+     LH  L +  ++ D
Sbjct: 57  LCKQGNLNQALQVL----SQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQD 112

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            F+ TKL+++Y++   +D+AR+VF+  R+R +Y W+A+  A +     REV++L+  M +
Sbjct: 113 PFLATKLINMYSELDSIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNR 172

Query: 151 DGLFPDDFLFPKILQACGNCGDFEA----GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            G+  D F +  +L+AC     F +    G+ +H  +++ G      +  ++L +Y + G
Sbjct: 173 IGVPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFG 232

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL--GVVTF--- 261
            ++ A R F+ M  K+ V+W++MI+ Y + G+  EA  LF KM  E   L    VT    
Sbjct: 233 CVLNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSV 292

Query: 262 --------------------------------NILIRSYNQLGQCDVAMEMVKRMESLGI 289
                                           + L+  Y + G  ++   + +RME    
Sbjct: 293 LQACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKR-- 350

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             DV +W  +IS +  +G   +A+ +FKEM   G+ P+ ++  S + AC+    +  G  
Sbjct: 351 --DVVSWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKV 408

Query: 350 I-HSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           +  S+         V     ++++  +   L EAA+ + DM  +     W S++ G C+
Sbjct: 409 LFESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLL-GSCR 466



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 180/407 (44%), Gaps = 61/407 (14%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           LI  Y++L   D A ++  +     I    + W  +       G   + LDL++ M+ +G
Sbjct: 119 LINMYSELDSIDNARKVFDKTRKRTI----YVWNALFRALTLAGYGREVLDLYRRMNRIG 174

Query: 324 VMPNGVTITSAISACTDLKA----LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
           V  +  T T  + AC   +A    L  G EIH   ++ GF   V +  +L++MY++   +
Sbjct: 175 VPSDRFTYTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCV 234

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM--QESDVPPNVITW----- 432
             A RVFD +  K+V SW++MIA Y + G   +A ELF KM  +  D+ PN +T      
Sbjct: 235 LNASRVFDQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQ 294

Query: 433 ------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                         + L++ Y + GN +    +F+RM K D V 
Sbjct: 295 ACAALAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVV- 353

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY--LVASNKVK 520
               SWNSLI+ Y   G    A+ +F++M      P+ ++ +SVL AC++  LV   KV 
Sbjct: 354 ----SWNSLISSYGIHGFGRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVL 409

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
                V    +  S+     ++D   ++  +  +  I D M        W SL+    + 
Sbjct: 410 -FESMVRGHKIFPSVEHYACMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRI- 467

Query: 580 GFWHAALDLFDQMKS--FGLKP-NRGTFLSIILAHSLAGMVDLGKKV 623
              H  ++L ++  S  F L+P N G ++ +   ++ A M +  K+V
Sbjct: 468 ---HCNVELAERATSRLFELEPTNAGNYVLLADIYAEAKMWNEVKRV 511



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/402 (20%), Positives = 167/402 (41%), Gaps = 72/402 (17%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+    K G L+ A +V         +T+  +I + +R     + ++L   ++ DG   D
Sbjct: 53  LIQSLCKQGNLNQALQVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQD 112

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            FL  K++                                    +Y +   +  AR+ F+
Sbjct: 113 PFLATKLIN-----------------------------------MYSELDSIDNARKVFD 137

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS--------- 267
              ++    WN++       G   E   L+ +M R  +     T+  ++++         
Sbjct: 138 KTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVS 197

Query: 268 --------------YNQLGQCDVAMEMVKRMESLG------------ITPDVFTWTCMIS 301
                         +   G   +   ++      G               +V +W+ MI+
Sbjct: 198 LLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIA 257

Query: 302 GFAQNGRTSQALDLFKEMSFVG--VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
            +++NG+  +AL+LF++M      ++PN VT+ S + AC  L AL  G  +H   ++ G 
Sbjct: 258 CYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGL 317

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
              + V ++L+ +Y++C  LE   RVF+ ++ +DV SWNS+I+ Y   G+  KA ++F +
Sbjct: 318 DSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKE 377

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
           M +  + P+ I++  ++      G  +E   LF+ M +  K+
Sbjct: 378 MIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKI 419


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  339 bits (869), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 219/654 (33%), Positives = 320/654 (48%), Gaps = 83/654 (12%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++F W  +I   +     + +L LF +M   G+ PN  T  S   +C   KA     ++
Sbjct: 90  PNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQL 149

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEEL------------------------------- 379
           H+ A+K+       V  SLI+MYS+  EL                               
Sbjct: 150 HAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHV 209

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN----------- 428
           + A R+FD I  KDV SWN+MIAGY Q+G   +A   F +MQE+DV PN           
Sbjct: 210 DDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSAC 269

Query: 429 -----------VITW-------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                      + +W             N L+  Y + G    A  LF  M   D +   
Sbjct: 270 GHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVIL-- 327

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
              WN++I GY  L     AL +F  M      PN VT L+VLPACA L A +  K +H 
Sbjct: 328 ---WNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHA 384

Query: 525 CVLRRSLESSLPVMN-----SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
            +  ++L+ +  V N     S+I  YAK G +  +  +F  M S+ + +WN++I G  ++
Sbjct: 385 YI-DKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMN 443

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
           G    AL LF++M + G +P+  TF+ ++ A + AG V+LG + F S+ + Y I P ++H
Sbjct: 444 GHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQH 503

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
           Y  MIDL  RSGK +EA   + +M +EPD +IW +LL ACRIHG ++      ERLF+LE
Sbjct: 504 YGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELE 563

Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSE 759
           P +     L+  IYA  G+ +D  K+R    +   +   G   IE+  +V+ F+ G    
Sbjct: 564 PENSGAYVLLSNIYAGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFH 623

Query: 760 SYSDLLYSWLQNVPE-----NVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQ 814
             S+ ++  L  V            +S     ++EE KE     HSEKLA+AF LI S++
Sbjct: 624 PQSENIFRMLDEVDRLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLI-STK 682

Query: 815 APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              TIRIVKN+R+C +CH   K +S + + EI   D    HHFK+G CSC D W
Sbjct: 683 PGSTIRIVKNLRVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 158/617 (25%), Positives = 269/617 (43%), Gaps = 116/617 (18%)

Query: 55  VRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLD--DAR 111
           +  + ++NLL  C D  S+   +++H+ +        +F ++KL+   A     D   A 
Sbjct: 23  LENHPHLNLLAKCPDIPSL---KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYAL 79

Query: 112 EVFEDMRER--NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
            +F  +  +  N++ W+ +I A+S        + LF  M+  GL+P+   FP + ++C  
Sbjct: 80  SLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAK 139

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
                  K +H+  +KL +     V  S++ +Y + G+L  AR  F+    +D V++ ++
Sbjct: 140 SKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTAL 199

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           I+GY   G  D+A RLFD++  ++    VV++N +I  Y Q G+ + A+    RM+   +
Sbjct: 200 ITGYVSEGHVDDARRLFDEIPAKD----VVSWNAMIAGYVQSGRFEEALACFTRMQEADV 255

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
           +                                   PN  T+ S +SAC  L++L +G  
Sbjct: 256 S-----------------------------------PNQSTMVSVLSACGHLRSLELGKW 280

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           I S     GF  ++ + N+L++MYSKC E+  A ++FD ++DKDV  WN+MI GYC    
Sbjct: 281 IGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSL 340

Query: 410 CGKAYELFIKMQESDVPPNVIT-------------------------------------- 431
             +A  LF  M   +V PN +T                                      
Sbjct: 341 YEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVS 400

Query: 432 -WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
            W  +I  Y + G  + A  +F+ MG      R+ ASWN++I+G    G    ALG+F +
Sbjct: 401 LWTSIIVMYAKCGCVEVAEQVFRSMG-----SRSLASWNAMISGLAMNGHAERALGLFEE 455

Query: 491 MQSSCFYPNCVTILSVLPACA----------YLVASNKVKEIHGCVLRRSLESSLPVMNS 540
           M +  F P+ +T + VL AC           Y  + NK            +   L     
Sbjct: 456 MINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNK---------DYGISPKLQHYGC 506

Query: 541 LIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
           +ID  A+SG    ++ +   M    D   W SL+    +HG        +   + F L+P
Sbjct: 507 MIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHG--QVEFGEYVAERLFELEP 564

Query: 600 -NRGTFLSIILAHSLAG 615
            N G +  ++L++  AG
Sbjct: 565 ENSGAY--VLLSNIYAG 579



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 120/492 (24%), Positives = 214/492 (43%), Gaps = 78/492 (15%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLS 99
           ++ +   +   G     +T+ +L ++C  S + H A++LHA  L L   +   V T L+ 
Sbjct: 111 SLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIH 170

Query: 100 VYAKCGCL-------------------------------DDAREVFEDMRERNLYTWSAM 128
           +Y++ G L                               DDAR +F+++  +++ +W+AM
Sbjct: 171 MYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAM 230

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM 188
           I  Y +  R+ E +  F  M +  + P+      +L ACG+    E GK + S V   G 
Sbjct: 231 IAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGF 290

Query: 189 SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
               ++ N+++ +Y KCG++  AR+ F+ M++KD + WN+MI GY  +   +EA  LF+ 
Sbjct: 291 GKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEV 350

Query: 249 MCREEIKLGVVTFNILIRSYNQLGQCD----VAMEMVKRMESLG---------------- 288
           M RE +    VTF  ++ +   LG  D    V   + K ++  G                
Sbjct: 351 MLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYA 410

Query: 289 ------ITPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
                 +   VF         +W  MISG A NG   +AL LF+EM   G  P+ +T   
Sbjct: 411 KCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVG 470

Query: 334 AISACTDLKALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF-DMIKD 391
            +SACT    + +G     S+    G +  +     +I++ ++  + + A+ +  +M  +
Sbjct: 471 VLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEME 530

Query: 392 KDVYSWNSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
            D   W S++     + Q  +     E   +++    P N   + +L + Y   G  D+ 
Sbjct: 531 PDGAIWGSLLNACRIHGQVEFGEYVAERLFELE----PENSGAYVLLSNIYAGAGRWDDV 586

Query: 449 VDLFQRMGKNDK 460
             +  R   NDK
Sbjct: 587 AKI--RTKLNDK 596



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 158/310 (50%), Gaps = 9/310 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           +GR  EA+     +        ++T +++L AC    S+ L + + +++ +     ++ +
Sbjct: 237 SGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQL 296

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y+KCG +  AR++F+ M ++++  W+ MIG Y     + E + LF +M+++ +
Sbjct: 297 VNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENV 356

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIK--LGMSCVRRVR--NSVLAVYVKCGKLI 209
            P+D  F  +L AC + G  + GK +H+ + K   G   V  V    S++ +Y KCG + 
Sbjct: 357 TPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVE 416

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A + F SM  +   +WN+MISG    G  + A  LF++M  E  +   +TF  ++ +  
Sbjct: 417 VAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACT 476

Query: 270 QLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
           Q G  ++       M +  GI+P +  + CMI   A++G+  +A  L   M    + P+G
Sbjct: 477 QAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNME---MEPDG 533

Query: 329 VTITSAISAC 338
               S ++AC
Sbjct: 534 AIWGSLLNAC 543



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 108/220 (49%), Gaps = 13/220 (5%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTE-----IDVFVK 94
           EA+ + + +  +       T++ +L AC    ++ L + +HA+++   +      +V + 
Sbjct: 343 EALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSLW 402

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T ++ +YAKCGC++ A +VF  M  R+L +W+AMI   + +      + LF  M+ +G  
Sbjct: 403 TSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGFQ 462

Query: 155 PDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           PDD  F  +L AC   G  E G +   S+    G+S   +    ++ +  + GK   A+ 
Sbjct: 463 PDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAKV 522

Query: 214 FFESMD-EKDGVAWNSM-----ISGYFQIGENDEAHRLFD 247
              +M+ E DG  W S+     I G  + GE   A RLF+
Sbjct: 523 LMGNMEMEPDGAIWGSLLNACRIHGQVEFGEY-VAERLFE 561


>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 780

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 230/736 (31%), Positives = 355/736 (48%), Gaps = 89/736 (12%)

Query: 97  LLSVYAKCGCLDDAREVF--EDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           LL  YA    L  AR V     +R R+ + W+++  A S      E + ++ LM++  + 
Sbjct: 55  LLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRALSSASLPSEALRVYNLMLRSAVR 114

Query: 155 PDDFLFP--KILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           PDD  FP      A       + G  +H+  ++ G        N+++A Y  CGK   AR
Sbjct: 115 PDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTGNTLVAFYAACGKACDAR 174

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------- 261
           R F+ M E+D V+WNS++S +   G   +A R    M R    L V +            
Sbjct: 175 RVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQ 234

Query: 262 ------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                   N L+  Y + G  + +M++   M    +  +  +W 
Sbjct: 235 EEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGM----LEQNEVSWN 290

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
             I  F   G     L +F++MS   VMP  +T++S + A  +L +  +G E+H  ++K 
Sbjct: 291 SAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKR 350

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
               D+ V NSL++MY+K   LE A  +F+ +KD++V SWN+MIA   Q G   +A+ L 
Sbjct: 351 AMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLV 410

Query: 418 IKMQESDVPPNVIT----------------------W-------------NVLISGYIQN 442
             MQ+S   PN IT                      W             N LI  Y + 
Sbjct: 411 TDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKC 470

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G    A ++F+R  K+D       S+N+LI GY Q      +L +F++M+S     + V+
Sbjct: 471 GQLSLARNIFERSEKDD------VSYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVS 524

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM-NSLIDTYAKSGNIVYSRTIFDGM 561
            +  L AC  L      KEIH CVL R L S  P + NSL+D Y K G +V +  IF+ +
Sbjct: 525 FMGALSACTNLSVFKHGKEIH-CVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKI 583

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
           + KD+ +WN++I GY +HG    A +LF+ MK  GL  +  ++++++ A S  G+VD GK
Sbjct: 584 TKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGK 643

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
           K F  +     I P   HY+ M+DL GR+G+L +  E I DMP   +S +W ALL ACRI
Sbjct: 644 KYFSQMV-AQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRI 702

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           HGNI+LA  A E LF+L+P       L++ +YA  G+  +A K+RKL +    + +    
Sbjct: 703 HGNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYS 762

Query: 742 WIEVK--NLVYTFVTG 755
           W++ +  N +  F+ G
Sbjct: 763 WVQDQDGNKLQAFLVG 778



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 206/452 (45%), Gaps = 53/452 (11%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T  +LL A ++  S  L R++H + +    ++D+FV   L+ +YAK G L+ A  +FE M
Sbjct: 323 TLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQM 382

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
           ++RN+ +W+AMI    ++    E   L   M + G  P+      +L AC      + GK
Sbjct: 383 KDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGK 442

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H+  I+ G+     + N+++ +Y KCG+L  AR  FE   EKD V++N++I GY Q  
Sbjct: 443 QIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSP 501

Query: 238 ENDEAHRLFDKMCREEIKLGVVTF-----------------------------------N 262
              E+  LF +M    I    V+F                                   N
Sbjct: 502 WCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSN 561

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            L+  Y + G    A ++  ++       DV +W  MI G+  +G+   A +LF+ M   
Sbjct: 562 SLLDLYTKGGMLVTASKIFNKI----TKKDVASWNTMILGYGMHGQIDIAFELFELMKGD 617

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EA 381
           G+  + V+  + ++AC+    +  G +  S  V        +    ++++  +  +L + 
Sbjct: 618 GLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKC 677

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAG----YCGKAYELFIKMQESDVPPNVITWNVLIS 437
           AE + DM    +   W +++ G C+          A E   +++    P +   + ++I+
Sbjct: 678 AEIIRDMPFPANSDVWGALL-GACRIHGNIELAQWAAEHLFELK----PEHSGYYTLMIN 732

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
            Y + G  +EA +  +++ K+ KV++N A SW
Sbjct: 733 MYAETGRWNEA-NKIRKLMKSRKVQKNPAYSW 763



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 176/375 (46%), Gaps = 17/375 (4%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  NG   EA  ++  +   G      T +N+L AC    S+ + +++HA+ +      D
Sbjct: 397 LVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFD 456

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +F+   L+ +Y+KCG L  AR +FE   E++  +++ +I  YS+     E + LF  M  
Sbjct: 457 LFISNALIDMYSKCGQLSLARNIFER-SEKDDVSYNTLILGYSQSPWCFESLLLFKQMRS 515

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G+  D   F   L AC N   F+ GK +H ++++  +S    + NS+L +Y K G L+ 
Sbjct: 516 VGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVT 575

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A + F  + +KD  +WN+MI GY   G+ D A  LF+ M  + +    V++  ++ + + 
Sbjct: 576 ASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSH 635

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G  D   +   +M +  I P    + CM+    + G+ S+  ++ ++M F    P    
Sbjct: 636 GGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKCAEIIRDMPF----PANSD 691

Query: 331 ITSAISACTDLKA---LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
           +  A+     +     LA     H   +K   +    +   +INMY++      A ++  
Sbjct: 692 VWGALLGACRIHGNIELAQWAAEHLFELKPEHSGYYTL---MINMYAETGRWNEANKIRK 748

Query: 388 MIKDKDV-----YSW 397
           ++K + V     YSW
Sbjct: 749 LMKSRKVQKNPAYSW 763


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 207/666 (31%), Positives = 337/666 (50%), Gaps = 69/666 (10%)

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTC--MISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
           +  C ++  +   +    + P   T  C   +   +++    + L +++ M   G+  + 
Sbjct: 63  ISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDR 122

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            +    + A + +K+L  G+EIH LA K+GF  D  V   L+ MY+ C  +  A  +FD 
Sbjct: 123 FSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDK 182

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN-------------------- 428
           +  +DV +W+ MI GYCQ+G    A  LF +M+  +V P+                    
Sbjct: 183 MFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYG 242

Query: 429 ------VITWNVLISGYIQN---------GNEDEAVDLFQRMGK---------------- 457
                 ++  N+++  ++Q+         G+ D A++LF++M                  
Sbjct: 243 KMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKL 302

Query: 458 ----------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
                     N  VK++   W+++I+GY +      AL +F +MQS    P+ VT+LSV+
Sbjct: 303 GQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVI 362

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
            ACA+L A ++ K IH  V +     +LP+ N+LI+ YAK G++  +R IFD M  K++I
Sbjct: 363 TACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVI 422

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
           +W  +I  + +HG   +AL  F QM+   ++PN  TF+ ++ A S AG+V+ G+K+F S+
Sbjct: 423 SWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSM 482

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
              + I P   HY  M+DL+GR+  L EA+E +E MP+ P+  IW +L+ ACR+HG I+L
Sbjct: 483 INEHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIEL 542

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
              A +RL +L+P        +  IYA   + ED  +VRKL +        G    E+ N
Sbjct: 543 GEFAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNN 602

Query: 748 LVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEK 802
            ++ F+    S  ++D +Y  L  V   +         C     +EEEEK+E+   HSEK
Sbjct: 603 EIHEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEK 662

Query: 803 LALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQC 862
           LAL + L+        IRI+KN+R+C  CH   K  S ++  EI + D    HH+K+G C
Sbjct: 663 LALCYGLMRDGTGS-CIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVC 721

Query: 863 SCGDYW 868
           SC DYW
Sbjct: 722 SCKDYW 727



 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/472 (26%), Positives = 221/472 (46%), Gaps = 43/472 (9%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLL 98
           + + V + + TQG  V R ++  LL+A     S+    ++H     L  + D FV+T L+
Sbjct: 105 KTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLV 164

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +YA CG + +AR +F+ M  R++ TWS MI  Y +   + + + LF  M    + PD+ 
Sbjct: 165 RMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEM 224

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
           +   +L ACG  G+   GK++H  +++  +     ++++++ +Y  CG +  A   FE M
Sbjct: 225 MLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKM 284

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
             K+ VA  +M++GY ++G+ + A  +F++M ++++    V ++ +I  Y +      A+
Sbjct: 285 TPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDL----VCWSAMISGYAESDSPQEAL 340

Query: 279 EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
            +   M+SLGI PD  T   +I                                   +AC
Sbjct: 341 NLFNEMQSLGIKPDQVTMLSVI-----------------------------------TAC 365

Query: 339 TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN 398
             L AL     IH    K GF   + + N+LI MY+KC  LE A R+FD +  K+V SW 
Sbjct: 366 AHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWT 425

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
            MI+ +   G  G A   F +M++ ++ PN IT+  ++      G  +E   +F  M   
Sbjct: 426 CMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINE 485

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             +      +  ++  + +      AL +   M      PN +   S++ AC
Sbjct: 486 HNITPKHVHYGCMVDLFGRANLLREALELVEAMP---LAPNVIIWGSLMAAC 534



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 176/404 (43%), Gaps = 47/404 (11%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NL 85
           +D  C +G  N+A+ + + +     +        +L AC  + ++   + +H F+   N+
Sbjct: 195 IDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNI 254

Query: 86  VTEIDVFVKTKLLSVYAKCGCLD-------------------------------DAREVF 114
           V  +D  +++ L+++YA CG +D                               +AR VF
Sbjct: 255 V--VDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVF 312

Query: 115 EDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE 174
             M +++L  WSAMI  Y+     +E + LF  M   G+ PD      ++ AC + G  +
Sbjct: 313 NQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALD 372

Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
             K +H  V K G      + N+++ +Y KCG L  ARR F+ M  K+ ++W  MIS + 
Sbjct: 373 QAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFA 432

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDV 293
             G+   A R F +M  E I+   +TF  ++ + +  G  +   ++   M     ITP  
Sbjct: 433 MHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKH 492

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
             + CM+  F +     +AL+L + M      PN +   S ++AC     + +G      
Sbjct: 493 VHYGCMVDLFGRANLLREALELVEAMPLA---PNVIIWGSLMAACRVHGEIELG----EF 545

Query: 354 AVKMGFTDDVLVGNS---LINMYSKCEELEAAERVFDMIKDKDV 394
           A K     D     +   L N+Y+K    E   +V  ++K K +
Sbjct: 546 AAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGI 589


>gi|224127907|ref|XP_002320193.1| predicted protein [Populus trichocarpa]
 gi|222860966|gb|EEE98508.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 189/502 (37%), Positives = 288/502 (57%), Gaps = 9/502 (1%)

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MY K + L +++ +FD +K+K++ +WNS+I+GY   G+   A  L  +M+E  + P++IT
Sbjct: 1   MYVKNDCLTSSQAIFDNMKNKNIVAWNSLISGYSFKGHFDHAKRLLNRMKEEGIKPDLIT 60

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           WN L++GY   G+  EA+ L   + K   +  N  SW +LI+G  Q G  + ++  F +M
Sbjct: 61  WNSLVAGYSMRGHTKEALALIHDI-KISGLTPNVVSWTALISGCSQNGNYSESIEAFVQM 119

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
           Q     PN  TI S+L  C  L    K KEIH   +R+S    L V  +LIDTY+KSG++
Sbjct: 120 QEEGIKPNSATISSLLRTCGGLSLLQKGKEIHCLSIRKSFIEDLYVATALIDTYSKSGDL 179

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             +  +F   + K + +WN +I G+ ++G     + L D M+  G+ P+  TF +++   
Sbjct: 180 ESAHKVF-WSAEKTLASWNCMIMGFAINGCGREVIALLDGMQRAGILPDAITFTALLSGC 238

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
             +G+V+ G K F  ++  Y I P IEHYS M DL GR+G L+EA +FI+ MPI+PD+S+
Sbjct: 239 KNSGLVEEGWKCFDMMSNDYGIKPTIEHYSCMADLLGRAGYLDEAWDFIQTMPIKPDASV 298

Query: 672 WEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
           W A+L +CRIHGNI+ A +A + LF LEP +     L+L +YA+  + ED  +++ L   
Sbjct: 299 WGAMLGSCRIHGNIEFAEIAAKELFKLEPYNSANYVLMLSLYAMSNRWEDVDRIKDLMDT 358

Query: 732 NTRRNSFGQCWIEVKNLVYTFVTGGWS-ESYSDLLYSWLQNVPENVTARSSHSGLC---- 786
              +      WI++   V+ F  GG   +   ++ Y   Q V E           C    
Sbjct: 359 RGIKPRQVWSWIQIDQRVHLFSAGGIPHQDEGEIYYELYQLVSELKKFGYLPDVNCVYQN 418

Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
           I+EEEK ++   H+EKLA+ + LI +S AP  IR++KN R+C  CH  AK +S++   EI
Sbjct: 419 IDEEEKVKMLLSHTEKLAITYGLIKTSSAP--IRVIKNTRICSDCHTAAKLISLVRSREI 476

Query: 847 FLADSKCLHHFKNGQCSCGDYW 868
           FL D    HHFK G+CSC DYW
Sbjct: 477 FLRDGVRFHHFKAGKCSCNDYW 498



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 95/262 (36%), Positives = 150/262 (57%), Gaps = 1/262 (0%)

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +YVK   L  ++  F++M  K+ VAWNS+ISGY   G  D A RL ++M  E IK  ++T
Sbjct: 1   MYVKNDCLTSSQAIFDNMKNKNIVAWNSLISGYSFKGHFDHAKRLLNRMKEEGIKPDLIT 60

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
           +N L+  Y+  G    A+ ++  ++  G+TP+V +WT +ISG +QNG  S++++ F +M 
Sbjct: 61  WNSLVAGYSMRGHTKEALALIHDIKISGLTPNVVSWTALISGCSQNGNYSESIEAFVQMQ 120

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
             G+ PN  TI+S +  C  L  L  G EIH L+++  F +D+ V  +LI+ YSK  +LE
Sbjct: 121 EEGIKPNSATISSLLRTCGGLSLLQKGKEIHCLSIRKSFIEDLYVATALIDTYSKSGDLE 180

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
           +A +VF    +K + SWN MI G+   G   +   L   MQ + + P+ IT+  L+SG  
Sbjct: 181 SAHKVF-WSAEKTLASWNCMIMGFAINGCGREVIALLDGMQRAGILPDAITFTALLSGCK 239

Query: 441 QNGNEDEAVDLFQRMGKNDKVK 462
            +G  +E    F  M  +  +K
Sbjct: 240 NSGLVEEGWKCFDMMSNDYGIK 261



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 143/337 (42%), Gaps = 21/337 (6%)

Query: 74  HLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR----ERNLYTWSAMI 129
           H  R L+       + D+     L++ Y+  G   +A  +  D++      N+ +W+A+I
Sbjct: 41  HAKRLLNRMKEEGIKPDLITWNSLVAGYSMRGHTKEALALIHDIKISGLTPNVVSWTALI 100

Query: 130 GAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMS 189
              S++  + E +E F  M ++G+ P+      +L+ CG     + GK +H L I+    
Sbjct: 101 SGCSQNGNYSESIEAFVQMQEEGIKPNSATISSLLRTCGGLSLLQKGKEIHCLSIRKSFI 160

Query: 190 CVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
               V  +++  Y K G L  A + F S  EK   +WN MI G+   G   E   L D M
Sbjct: 161 EDLYVATALIDTYSKSGDLESAHKVFWSA-EKTLASWNCMIMGFAINGCGREVIALLDGM 219

Query: 250 CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGR 308
            R  I    +TF  L+      G  +   +    M +  GI P +  ++CM     + G 
Sbjct: 220 QRAGILPDAITFTALLSGCKNSGLVEEGWKCFDMMSNDYGIKPTIEHYSCMADLLGRAGY 279

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
             +A D  + M    + P+     + + +C     +   +E   +A K  F  +     +
Sbjct: 280 LDEAWDFIQTMP---IKPDASVWGAMLGSCR----IHGNIEFAEIAAKELFKLEPYNSAN 332

Query: 369 ---LINMYSKCEELEAAERVFDM-----IKDKDVYSW 397
              ++++Y+     E  +R+ D+     IK + V+SW
Sbjct: 333 YVLMLSLYAMSNRWEDVDRIKDLMDTRGIKPRQVWSW 369



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 105/271 (38%), Gaps = 61/271 (22%)

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +Y K  CL  ++ +F++M+ +N+  W+++I  YS    +     L   M ++G+ PD   
Sbjct: 1   MYVKNDCLTSSQAIFDNMKNKNIVAWNSLISGYSFKGHFDHAKRLLNRMKEEGIKPDLIT 60

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           +  ++          AG  M     K  ++ +  ++ S L   V                
Sbjct: 61  WNSLV----------AGYSMRGHT-KEALALIHDIKISGLTPNV---------------- 93

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
               V+W ++ISG  Q G   E+   F +M  E IK    T + L+R+   L       E
Sbjct: 94  ----VSWTALISGCSQNGNYSESIEAFVQMQEEGIKPNSATISSLLRTCGGLSLLQKGKE 149

Query: 280 M----------------------VKRMESLGITPDVF--------TWTCMISGFAQNGRT 309
           +                        +   L     VF        +W CMI GFA NG  
Sbjct: 150 IHCLSIRKSFIEDLYVATALIDTYSKSGDLESAHKVFWSAEKTLASWNCMIMGFAINGCG 209

Query: 310 SQALDLFKEMSFVGVMPNGVTITSAISACTD 340
            + + L   M   G++P+ +T T+ +S C +
Sbjct: 210 REVIALLDGMQRAGILPDAITFTALLSGCKN 240


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 207/630 (32%), Positives = 323/630 (51%), Gaps = 59/630 (9%)

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV--TITSAISACTDLKALAMGMEIHSL 353
           W   I   A  G    A+ LF  M       + V  ++ +A+ +C  L   A+G  +H+L
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75

Query: 354 AVKMGFTDDVLVGNSLINMYSK--CEEL-----------------EAAERVFDMIKDKDV 394
           A++ G   D    N+L+N+Y K  C  L                 E+  +VFD + ++DV
Sbjct: 76  AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY--------------- 439
            SWN+++ G  + G   +A     KM      P+  T + ++  +               
Sbjct: 136 VSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGF 195

Query: 440 -IQNGNEDEA------VDLFQRMGKND-KVK-------RNTASWNSLIAGYQQLGQKNNA 484
             +NG + +       +D++    + D  VK       R+   WNSL+AG  Q G    A
Sbjct: 196 AFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEA 255

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           LG+FR+M  +   P  VT  S++P C  L +    K++H  V+    E ++ + +SLID 
Sbjct: 256 LGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDM 315

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           Y K G I  +  IFD MSS D+++W ++I GY LHG    AL LF++M+    KPN  TF
Sbjct: 316 YCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITF 375

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           L+++ A S AG+VD G K F S++  Y I+P +EH++A+ D  GR+G+L+EA  FI  M 
Sbjct: 376 LAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQ 435

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
           I+P +S+W  LL ACR+H N  LA    +++ +LEP  +    ++  +Y+  G+  +A  
Sbjct: 436 IKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAAH 495

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSG 784
           +R+  R+   +      WIEVK+ ++ FV    S  + D +   L    E + AR  H  
Sbjct: 496 LRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQM-AREGHVP 554

Query: 785 LC------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
                   IEEE K  +   HSEKLA+ F +I S+ A   IR++KN+R+C+ CH   K++
Sbjct: 555 NTEDVFQDIEEEHKSYVLCGHSEKLAIVFGII-STPAGTKIRVMKNLRVCIDCHTVTKFI 613

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S +   EI + D+   HHFK+G CSCGD+W
Sbjct: 614 SKLADREIVVRDANRFHHFKDGNCSCGDFW 643



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 187/439 (42%), Gaps = 57/439 (12%)

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL---FPKILQACGNCGDFEAGKLMHS 181
           W+  I A + +  + + V LF  M +    P   +    P  L++C   G    G  +H+
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRM-RASAAPRSSVPASLPAALKSCAALGLSALGASLHA 74

Query: 182 LVIKLGMSCVRRVRNSVLAVY--VKCGKLIWA-----------------RRFFESMDEKD 222
           L I+ G    R   N++L +Y  V C  L                    R+ F+ M E+D
Sbjct: 75  LAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERD 134

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVK 282
            V+WN+++ G  + G + EA     KMCRE  +    T + ++  + +       +E+  
Sbjct: 135 VVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHG 194

Query: 283 RMESLGITPDVFT-------------------------------WTCMISGFAQNGRTSQ 311
                G   DVF                                W  +++G AQNG   +
Sbjct: 195 FAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEE 254

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           AL +F+ M   GV P  VT +S I  C +L +L  G ++H+  +  GF D+V + +SLI+
Sbjct: 255 ALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLID 314

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MY KC E+  A  +FD +   DV SW +MI GY   G   +A  LF +M+  +  PN IT
Sbjct: 315 MYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHIT 374

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           +  +++     G  D+    F+ M  +  +      + +L     + G+ + A     KM
Sbjct: 375 FLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKM 434

Query: 492 QSSCFYPNCVTILSVLPAC 510
           Q     P      ++L AC
Sbjct: 435 Q---IKPTASVWSTLLRAC 450



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 158/336 (47%), Gaps = 32/336 (9%)

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            A E V+++    I  DV +W  ++ G A+ GR  +AL   ++M   G  P+  T+++ +
Sbjct: 118 TAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVL 177

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
               +   +  G+E+H  A + GF  DV VG+SLI+MY+ C   + + +VFD +  +D  
Sbjct: 178 PIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHI 237

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI----------------SGY 439
            WNS++AG  Q G   +A  +F +M ++ V P  +T++ LI                +  
Sbjct: 238 LWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYV 297

Query: 440 IQNGNEDEA------VDLFQRMGK-------NDKVKR-NTASWNSLIAGYQQLGQKNNAL 485
           I  G ED        +D++ + G+        DK+   +  SW ++I GY   G    AL
Sbjct: 298 ICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREAL 357

Query: 486 GVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV-KEIHGCVLRRSLESSLPVMNSLIDT 544
            +F +M+     PN +T L+VL AC++    +K  K          +  +L    +L DT
Sbjct: 358 VLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADT 417

Query: 545 YAKSGNIVYSRTIFDGMSSKDIIT-WNSLICGYVLH 579
             ++G +  +      M  K   + W++L+    +H
Sbjct: 418 LGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVH 453



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/462 (23%), Positives = 194/462 (41%), Gaps = 62/462 (13%)

Query: 64  LQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGC---------------- 106
           L++C       L   LHA  +      D F    LL++Y K  C                
Sbjct: 57  LKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGS 116

Query: 107 ---LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKI 163
               +  R+VF++M ER++ +W+ ++   + + R  E +     M ++G  PD F    +
Sbjct: 117 STAFESVRKVFDEMIERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTV 176

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG 223
           L     C D + G  +H    + G      V +S++ +Y  C +  ++ + F+++  +D 
Sbjct: 177 LPIFAECADVKRGLEVHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDH 236

Query: 224 VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------------------- 261
           + WNS+++G  Q G  +EA  +F +M +  ++   VTF                      
Sbjct: 237 ILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAY 296

Query: 262 --------NILIRS-----YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR 308
                   N+ I S     Y + G+  +A  +  +M S    PDV +WT MI G+A +G 
Sbjct: 297 VICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSS----PDVVSWTAMIMGYALHGP 352

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFTDDVLVGN 367
             +AL LF+ M      PN +T  + ++AC+    +  G +   S++   G    +    
Sbjct: 353 AREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFA 412

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYS-WNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           +L +   +  EL+ A      ++ K   S W++++           A E+  K+ E + P
Sbjct: 413 ALADTLGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELE-P 471

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
            ++ +  VL + Y  +G  +EA  L + M K    K    SW
Sbjct: 472 RSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGMKKDPACSW 513



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 164/361 (45%), Gaps = 10/361 (2%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVK 94
           GR +EA+  +  +  +G +    T   +L    +   +    ++H F      + DVFV 
Sbjct: 149 GRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFVG 208

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           + L+ +YA C   D + +VF+++  R+   W++++   +++    E + +F  M+Q G+ 
Sbjct: 209 SSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVR 268

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P    F  ++  CGN      GK +H+ VI  G      + +S++ +Y KCG++  A   
Sbjct: 269 PVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCI 328

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F+ M   D V+W +MI GY   G   EA  LF++M     K   +TF  ++ + +  G  
Sbjct: 329 FDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSHAGLV 388

Query: 275 DVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
           D   +  K M +  GI P +  +  +     + G   +A +   +M    + P     ++
Sbjct: 389 DKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKMQ---IKPTASVWST 445

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDMIKD 391
            + AC   K   +  E+   A K+   +   +G+ ++  NMYS       A  + + ++ 
Sbjct: 446 LLRACRVHKNTMLAEEV---AKKIMELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRK 502

Query: 392 K 392
           K
Sbjct: 503 K 503



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/297 (22%), Positives = 128/297 (43%), Gaps = 47/297 (15%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           NG + EA+ +   +   G +    T+ +L+  C +  S+   ++LHA++     E +VF+
Sbjct: 249 NGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFI 308

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +Y KCG +  A  +F+ M   ++ +W+AMI  Y+     RE + LF  M     
Sbjct: 309 SSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNA 368

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+   F  +L AC + G  + G                                 W  +
Sbjct: 369 KPNHITFLAVLTACSHAGLVDKG---------------------------------W--K 393

Query: 214 FFESMDEKDGVA-----WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
           +F+SM    G+      + ++     + GE DEA+    KM   +IK     ++ L+R+ 
Sbjct: 394 YFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKM---QIKPTASVWSTLLRAC 450

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG-FAQNGRTSQALDLFKEMSFVGV 324
                  +A E+ K++  + + P       ++S  ++ +GR ++A  L + M   G+
Sbjct: 451 RVHKNTMLAEEVAKKI--MELEPRSIGSHVVLSNMYSASGRWNEAAHLRESMRKKGM 505


>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
 gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
          Length = 654

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 210/642 (32%), Positives = 332/642 (51%), Gaps = 66/642 (10%)

Query: 250 CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT--------------PDVFT 295
           C+   ++  V   IL+   +Q   C V  ++++ +  L I               P+ F 
Sbjct: 56  CKNLTQIKQVHARILLNGLDQ--SCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFL 113

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           +  +I G+    R  ++ + +  M   GV+P   T T+   AC     + +G +IH   +
Sbjct: 114 YNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTI 173

Query: 356 KMG-FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
            +G F +D+ VGNS+I+MY KC  LE                             CG+  
Sbjct: 174 LVGGFGEDLHVGNSMIDMYIKCGFLE-----------------------------CGR-- 202

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
           ++F +M   DV    I+W  LIS Y+++GN + A +LF  +   D V     +W  +++G
Sbjct: 203 KVFDEMPNRDV----ISWTELISAYVKSGNMESAGELFDGLPVKDMV-----AWTVMVSG 253

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL--E 532
           + Q  +   A+  F KMQ      + +T++ V+ ACA L A+     I     +     +
Sbjct: 254 FAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGK 313

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
            S+ V ++LID Y+K G++  +  +F GM  +++ +++S+I G+ +HG  H A+ LFD+M
Sbjct: 314 HSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEM 373

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
               +KPNR TF+ ++ A S AGMV+ G ++F  + +CY I P  +HY+ M+DL GR+G+
Sbjct: 374 VKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGR 433

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQI 712
           L+EA E ++ MPIEP   +W ALL ACRIH + D+A +A   LF+LEP  +    L+  I
Sbjct: 434 LQEAHELVKTMPIEPHGGVWGALLGACRIHKSPDIAAIAANHLFELEPYCIGNYILLANI 493

Query: 713 YAICGKPEDALKVRKLERENTRRNSFGQCWIEV-KNLVYTFVTGGWSESYSDLLYSWLQN 771
           YA CG+  D   VRKL R    R +    WIE  K +V+ F +G  +   S  +   L++
Sbjct: 494 YASCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQALED 553

Query: 772 VPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIR 826
           + + + A+     L      + +E+K  I   HSEKLALAF LI S+     IRIVKN+R
Sbjct: 554 LLDRLEAKGYQPHLSSVSYDVNDEDKRRILMTHSEKLALAFGLI-STIPGSKIRIVKNLR 612

Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +C  CH      S +   EI + D    HHF +G CSCG++W
Sbjct: 613 ICEDCHSVICGASQITGREIIVRDIMRFHHFHDGICSCGNFW 654



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 207/438 (47%), Gaps = 50/438 (11%)

Query: 61  INLLQACIDSNSIHLARKLHAFLNLVTEID--VFVKTKLLSVYAKCGCLDDAR--EVFED 116
           +  L  C +   I   +++HA + L+  +D   +V  KL+    K     D     +F  
Sbjct: 50  VTTLDGCKNLTQI---KQVHARI-LLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQ 105

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           +   N + ++A+I  Y  ++R +E  E + LM ++G+ P  F F  + +ACG   D   G
Sbjct: 106 VNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLG 165

Query: 177 KLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           + +H   I +G       V NS++ +Y+KCG L   R+ F+ M  +D ++W  +IS Y +
Sbjct: 166 RQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVK 225

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
            G  + A  LFD +                                          D+  
Sbjct: 226 SGNMESAGELFDGLP---------------------------------------VKDMVA 246

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           WT M+SGFAQN +  +A+  F++M   GV  + +T+   ISAC  L A      I  +A 
Sbjct: 247 WTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAE 306

Query: 356 K--MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
           K   G    V+VG++LI+MYSKC  +  A RVF  +K+++VYS++SMI G+   G    A
Sbjct: 307 KSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDA 366

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            +LF +M ++++ PN +T+  +++     G  ++   +F+ M K   +K +   +  ++ 
Sbjct: 367 MKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVD 426

Query: 474 GYQQLGQKNNALGVFRKM 491
              + G+   A  + + M
Sbjct: 427 LLGRAGRLQEAHELVKTM 444



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 95/405 (23%), Positives = 183/405 (45%), Gaps = 51/405 (12%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV---------- 86
           RL E+      +  +G      T+  L +AC     + L R++H    LV          
Sbjct: 126 RLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGGFGEDLHVG 185

Query: 87  -TEIDVFVK----------------------TKLLSVYAKCGCLDDAREVFEDMRERNLY 123
            + ID+++K                      T+L+S Y K G ++ A E+F+ +  +++ 
Sbjct: 186 NSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVKDMV 245

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
            W+ M+  ++++ + RE +  F  M + G+  D+     ++ AC   G  +    +  + 
Sbjct: 246 AWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVA 305

Query: 184 IK--LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
            K   G      V ++++ +Y KCG +  A R F+ M E++  +++SMI G+   G   +
Sbjct: 306 EKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHD 365

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMI 300
           A +LFD+M + EIK   VTF  ++ + +  G  +   ++ + ME   GI P    +TCM+
Sbjct: 366 AMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMV 425

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
               + GR  +A +L K M    + P+G    + + AC   K+     +I ++A    F 
Sbjct: 426 DLLGRAGRLQEAHELVKTMP---IEPHGGVWGALLGACRIHKS----PDIAAIAANHLFE 478

Query: 361 -DDVLVGNSLI--NMYSKCEELEAAERVFDMIKDKDV-----YSW 397
            +   +GN ++  N+Y+ C        V  +++ + +     +SW
Sbjct: 479 LEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNPAFSW 523



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 137/311 (44%), Gaps = 19/311 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA---RKLHAFLNLVTEIDV 91
           N +  EAI   + +   G +    T I ++ AC    +   A   R +        +  V
Sbjct: 257 NAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSV 316

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            V + L+ +Y+KCG + DA  VF+ M+ERN+Y++S+MI  ++   R  + ++LF  MV+ 
Sbjct: 317 VVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKT 376

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK-LGMSCVRRVRNSVLAVYVKCGKLIW 210
            + P+   F  +L AC + G  E G  +  L+ K  G+         ++ +  + G+L  
Sbjct: 377 EIKPNRVTFIGVLTACSHAGMVEQGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQE 436

Query: 211 ARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
           A    ++M  E  G  W +++ G  +I ++ +   +      E     +  + +L   Y 
Sbjct: 437 AHELVKTMPIEPHGGVWGALL-GACRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYA 495

Query: 270 QLGQCDVAMEMVKRMESLGITPD-VFTW----TCMISGF-------AQNGRTSQAL-DLF 316
             G+ +    + K M + G+  +  F+W      M+  F        ++G   QAL DL 
Sbjct: 496 SCGRWNDVSTVRKLMRTRGLRKNPAFSWIESEKGMVHEFFSGDMTHPRSGEIKQALEDLL 555

Query: 317 KEMSFVGVMPN 327
             +   G  P+
Sbjct: 556 DRLEAKGYQPH 566



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 20/284 (7%)

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV--YSRTIFDG 560
           I++ L  C  L    ++K++H  +L   L+ S  V+  LI T  K    V  Y  +IF+ 
Sbjct: 49  IVTTLDGCKNL---TQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQ 105

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           ++  +   +N+LI GY++      + + +  M+  G+ P   TF ++  A      V LG
Sbjct: 106 VNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLG 165

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
           +++             +   ++MID+Y + G LE   +  ++MP   D   W  L++A  
Sbjct: 166 RQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMP-NRDVISWTELISAYV 224

Query: 681 IHGNIDLAVLAIERLFDLEP-GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFG 739
             GN++ A      LFD  P  D++   +++  +A   KP +A+   +  +E      FG
Sbjct: 225 KSGNMESA----GELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQE------FG 274

Query: 740 QCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHS 783
              +E   +    V    ++  +     W+++V E       HS
Sbjct: 275 ---VETDEITLIGVISACAQLGAAKYADWIRDVAEKSEFGGKHS 315


>gi|12324033|gb|AAG51982.1|AC024260_20 hypothetical protein; 70922-66390 [Arabidopsis thaliana]
          Length = 839

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 227/720 (31%), Positives = 362/720 (50%), Gaps = 28/720 (3%)

Query: 44  VLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYA 102
           V+  I+ +G   R N  +        SN   + +K   FL    T   +F     +S +A
Sbjct: 2   VMRPISNKGLIYRHNICLRCNSTLAVSNHEPITQKTRNFLETTTTSTAIFQCNSQISKHA 61

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
           + G L +A  +F  M  R++ +W AMI AY+ + +  +  ++F  M        + +   
Sbjct: 62  RNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITA 121

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK- 221
           +++    C   +A +L   +  K  +S       +++  +V+ G+   A   +     K 
Sbjct: 122 MIK--NKCDLGKAYELFCDIPEKNAVSYA-----TMITGFVRAGRFDEAEFLYAETPVKF 174

Query: 222 -DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM 280
            D VA N ++SGY + G+ +EA R+F  M  +E    VV+ + ++  Y ++G+   A  +
Sbjct: 175 RDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKE----VVSCSSMVHGYCKMGRIVDARSL 230

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACT 339
             RM       +V TWT MI G+ + G       LF  M   G V  N  T+     AC 
Sbjct: 231 FDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           D      G +IH L  +M    D+ +GNSL++MYSK   +  A+ VF ++K+KD  SWNS
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           +I G  Q     +AYELF KM   D+    ++W  +I G+   G   + V+LF  M + D
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMMPEKD 402

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
            +     +W ++I+ +   G    AL  F KM      PN  T  SVL A A L    + 
Sbjct: 403 NI-----TWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
            +IHG V++ ++ + L V NSL+  Y K GN   +  IF  +S  +I+++N++I GY  +
Sbjct: 458 LQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYN 517

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
           GF   AL LF  ++S G +PN  TFL+++ A    G VDLG K F S+   Y I P  +H
Sbjct: 518 GFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDH 577

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
           Y+ M+DL GRSG L++A   I  MP +P S +W +LL+A + H  +DLA LA ++L +LE
Sbjct: 578 YACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELE 637

Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSE 759
           P       ++ Q+Y+I GK  D  ++  +++    +   G  WI +K  V+ F+ G  S+
Sbjct: 638 PDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQ 697


>gi|356526561|ref|XP_003531885.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 202/611 (33%), Positives = 323/611 (52%), Gaps = 46/611 (7%)

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           +I    + G   QAL L          P   T    I +C    +L+ G+++H   V  G
Sbjct: 53  LIQSLCKGGNLKQALHLL----CCEPNPTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSG 108

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
           F  D  +   LINMY +   ++ A +VFD  +++ +Y WN++       G+  +  +L+I
Sbjct: 109 FDQDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYI 168

Query: 419 KMQESDVPPNVITWNVLISGYI---------QNGNEDEA-----------------VDLF 452
           +M     P +  T+  ++   +         + G E  A                 +D++
Sbjct: 169 QMNWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVY 228

Query: 453 QRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKM--QSSCFYPNCVT 502
            + G              +N  SW+++IA + +      AL +F+ M  ++    PN VT
Sbjct: 229 AKFGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVT 288

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
           ++++L ACA L A  + K IHG +LRR L+S LPV+N+LI  Y + G ++  + +FD M 
Sbjct: 289 MVNMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMK 348

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            +D+++WNSLI  Y +HGF   A+ +F+ M   G+ P+  +F++++ A S AG+V+ GK 
Sbjct: 349 KRDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKI 408

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
           +F S+   Y+I P +EHY+ M+DL GR+ +L EA++ IEDM  EP  ++W +LL +CRIH
Sbjct: 409 LFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCRIH 468

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
            N++LA  A   LF+LEP +     L+  IYA      +A  V KL      +   G  W
Sbjct: 469 CNVELAERASTVLFELEPRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQKLPGCSW 528

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS--SHSGLC---IEEEEKEEISG 797
           IEVK  VY+FV+        + +++ L  +   + A+     + +    ++EEEKE I  
Sbjct: 529 IEVKRKVYSFVSVDEHNPQIEEIHALLVKLSNEMKAQGYVPQTNVVLYDLDEEEKERIVL 588

Query: 798 IHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF 857
            HSEKLA+AF LI +++   TIRI KN+R+C  CH   K++S   + EI + D    HHF
Sbjct: 589 GHSEKLAVAFGLINTAKG-ETIRIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHF 647

Query: 858 KNGQCSCGDYW 868
           ++G CSCGDYW
Sbjct: 648 RDGVCSCGDYW 658



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 146/278 (52%), Gaps = 8/278 (2%)

Query: 52  GAKVRRNTYINLLQACIDSN----SIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGC 106
           G    R TY  +L+AC+ S      +   +++HA  L    E ++ V T LL VYAK G 
Sbjct: 174 GTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGS 233

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL--FPDDFLFPKIL 164
           +  A  VF  M  +N  +WSAMI  +++++   + +ELF LM+ +     P+      +L
Sbjct: 234 VSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNML 293

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
           QAC      E GKL+H  +++  +  +  V N+++ +Y +CG+++  +R F++M ++D V
Sbjct: 294 QACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVV 353

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           +WNS+IS Y   G   +A ++F+ M  + +    ++F  ++ + +  G  +    + + M
Sbjct: 354 SWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESM 413

Query: 285 ES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
            S   I P +  + CM+    +  R  +A+ L ++M F
Sbjct: 414 LSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHF 451



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 159/397 (40%), Gaps = 48/397 (12%)

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P    F  ++ +C        G  +H  ++  G      +   ++ +Y + G +  A + 
Sbjct: 76  PTQQTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFDQDPFLATKLINMYYELGSIDRALKV 135

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------------- 249
           F+   E+    WN++      +G   E   L+ +M                         
Sbjct: 136 FDETRERTIYVWNALFRALAMVGHGKELLDLYIQMNWIGTPSDRFTYTYVLKACVVSELS 195

Query: 250 --------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                          R   +  +     L+  Y + G    A  +   M     T +  +
Sbjct: 196 VCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSVSYANSVFCAMP----TKNFVS 251

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSF--VGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
           W+ MI+ FA+N    +AL+LF+ M F     +PN VT+ + + AC  L AL  G  IH  
Sbjct: 252 WSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQACAGLAALEQGKLIHGY 311

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            ++      + V N+LI MY +C E+   +RVFD +K +DV SWNS+I+ Y   G+  KA
Sbjct: 312 ILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKKRDVVSWNSLISIYGMHGFGKKA 371

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            ++F  M    V P+ I++  ++      G  +E   LF+ M    ++      +  ++ 
Sbjct: 372 IQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV- 430

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               LG+ N      + ++   F P      S+L +C
Sbjct: 431 --DLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSC 465



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/486 (21%), Positives = 206/486 (42%), Gaps = 63/486 (12%)

Query: 32  LCGNGRLNEAITVL--DSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTE 88
           LC  G L +A+ +L  +   TQ       T+ +L+ +C   NS+     +H   ++   +
Sbjct: 57  LCKGGNLKQALHLLCCEPNPTQ------QTFEHLIYSCAQKNSLSYGLDVHRCLVDSGFD 110

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            D F+ TKL+++Y + G +D A +VF++ RER +Y W+A+  A +     +E+++L+  M
Sbjct: 111 QDPFLATKLINMYYELGSIDRALKVFDETRERTIYVWNALFRALAMVGHGKELLDLYIQM 170

Query: 149 VQDGLFPDDFLFPKILQACG----NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
              G   D F +  +L+AC     +      GK +H+ +++ G      V  ++L VY K
Sbjct: 171 NWIGTPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAK 230

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--------------- 249
            G + +A   F +M  K+ V+W++MI+ + +     +A  LF  M               
Sbjct: 231 FGSVSYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMV 290

Query: 250 ----------------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
                                  R ++   +   N LI  Y + G+  +   +   M+  
Sbjct: 291 NMLQACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMKK- 349

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
               DV +W  +IS +  +G   +A+ +F+ M   GV P+ ++  + + AC+    +  G
Sbjct: 350 ---RDVVSWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEG 406

Query: 348 -MEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAG-- 403
            +   S+  K      +     ++++  +   L EA + + DM  +     W S++    
Sbjct: 407 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLGEAIKLIEDMHFEPGPTVWGSLLGSCR 466

Query: 404 -YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
            +C      +A  +  +++    P N   + +L   Y +     EA  + + +      K
Sbjct: 467 IHCNVELAERASTVLFELE----PRNAGNYVLLADIYAEAKLWSEAKSVMKLLEARGLQK 522

Query: 463 RNTASW 468
               SW
Sbjct: 523 LPGCSW 528



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 133/295 (45%), Gaps = 44/295 (14%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           LI  Y +LG  D A+++        I    + W  +    A  G   + LDL+ +M+++G
Sbjct: 119 LINMYYELGSIDRALKVFDETRERTI----YVWNALFRALAMVGHGKELLDLYIQMNWIG 174

Query: 324 VMPNGVTITSAISACT----DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
              +  T T  + AC      +  L  G EIH+  ++ G+  ++ V  +L+++Y+K   +
Sbjct: 175 TPSDRFTYTYVLKACVVSELSVCPLRKGKEIHAHILRHGYEANIHVMTTLLDVYAKFGSV 234

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF-IKMQES--DVPPNVITWNV-- 434
             A  VF  +  K+  SW++MIA + +     KA ELF + M E+   VP +V   N+  
Sbjct: 235 SYANSVFCAMPTKNFVSWSAMIACFAKNEMPMKALELFQLMMFEACNSVPNSVTMVNMLQ 294

Query: 435 ------------LISGYIQNGNEDEAVDLF----------------QRMGKNDKVKRNTA 466
                       LI GYI     D  + +                 QR+  N K KR+  
Sbjct: 295 ACAGLAALEQGKLIHGYILRRQLDSILPVLNALITMYGRCGEVLMGQRVFDNMK-KRDVV 353

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY--LVASNKV 519
           SWNSLI+ Y   G    A+ +F  M      P+ ++ ++VL AC++  LV   K+
Sbjct: 354 SWNSLISIYGMHGFGKKAIQIFENMIHQGVSPSYISFITVLGACSHAGLVEEGKI 408


>gi|297848728|ref|XP_002892245.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338087|gb|EFH68504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 664

 Score =  338 bits (867), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 216/652 (33%), Positives = 334/652 (51%), Gaps = 38/652 (5%)

Query: 240 DEAHRL-FDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV----- 293
           DE+H +     C++ + L +V  +IL R    +    VA ++V    SL  +PD      
Sbjct: 28  DESHFISLIHTCKDTVSLRLVHAHILRRG---VLSSRVAAQLVS-CSSLLKSPDYSLSIF 83

Query: 294 --------FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
                   F +  +I G  +N R   ++  F  M  +GV P+ +T    + + + L    
Sbjct: 84  RNSEERNPFVFNALIRGLTENARFECSVRHFILMLTLGVKPDRLTFPFVLKSNSKLGFRW 143

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF----DMIKDKDVYSWNSMI 401
           +G  +H+  +K     D  V  SL++MY+K  +L  A +VF    D IK + +  WN ++
Sbjct: 144 LGRALHAATLKNFVDCDSFVRVSLVDMYAKTGQLNHAFQVFEETPDRIKKESILLWNVLV 203

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
            GYC+A     A  LF  M E     N  +W+ LI GY+ NG  + A  LF+ M +    
Sbjct: 204 NGYCRAKDMQMATTLFRSMPER----NSGSWSTLIKGYVDNGELNRAKQLFELMPE---- 255

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
            +N  SW +LI G+ Q G    A+  + +M      PN  T+ +VL AC+   A      
Sbjct: 256 -KNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTVAAVLSACSKSGALGSGIR 314

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           IHG +L   ++    +  SL+D YAK G +  + T+F  M+ KDI++W ++I G+ +HG 
Sbjct: 315 IHGYILDNGIKLDRAIGTSLLDMYAKCGEVDCAATVFSNMNHKDILSWTAMIQGWAVHGR 374

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
           +H A+  F QM   G KP+   FL+++ A   +G VDLG   F S+   Y I P ++HY 
Sbjct: 375 FHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSGEVDLGLNFFDSMRLDYAIEPTLKHYV 434

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            ++DL GR+GKL+EA E +E MPI PD + W AL  AC+ H + +   + ++ L +L+P 
Sbjct: 435 LVVDLLGRAGKLDEAHELVEYMPINPDLTTWAALYRACKAHKS-NRTDIVLQNLLELDPE 493

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
                  + + +A  GK +D  K R   ++  +  S G  +IE+   +  F    ++   
Sbjct: 494 LRGSYIFLDKTHAAKGKYQDVEKRRLSLQKKVKERSMGCSYIELDCQLNKFAADDYTHKQ 553

Query: 762 SDLLYSWLQNVPENVTARSSHSGL-----CIEEEEKEEISGIHSEKLALAFALIGSSQAP 816
           +  +   L+ +      R    G       IEEEEKE ++GIHSEKLAL   L+ ++   
Sbjct: 554 AQEIRLKLEGIISLAIERGYIPGADWSIHDIEEEEKESVTGIHSEKLALTLGLLRTAPGT 613

Query: 817 HTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            TIRI+KN+R+C  CH   KYVS +    I L D++  HHFK+G CSCGDYW
Sbjct: 614 -TIRIIKNLRICGDCHSLMKYVSKISQRGILLRDARQFHHFKDGSCSCGDYW 664



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 207/411 (50%), Gaps = 15/411 (3%)

Query: 49  ATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLD 108
           A + A    + +I+L+  C D+ S+ L   +HA +     +   V  +L+S  +     D
Sbjct: 21  ADRRASPDESHFISLIHTCKDTVSLRL---VHAHILRRGVLSSRVAAQLVSCSSLLKSPD 77

Query: 109 DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACG 168
            +  +F +  ERN + ++A+I   + + R+   V  F LM+  G+ PD   FP +L++  
Sbjct: 78  YSLSIFRNSEERNPFVFNALIRGLTENARFECSVRHFILMLTLGVKPDRLTFPFVLKSNS 137

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK----DGV 224
             G    G+ +H+  +K  + C   VR S++ +Y K G+L  A + FE   ++      +
Sbjct: 138 KLGFRWLGRALHAATLKNFVDCDSFVRVSLVDMYAKTGQLNHAFQVFEETPDRIKKESIL 197

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
            WN +++GY +  +   A  LF  M   E   G  +++ LI+ Y   G+ + A ++ + M
Sbjct: 198 LWNVLVNGYCRAKDMQMATTLFRSM--PERNSG--SWSTLIKGYVDNGELNRAKQLFELM 253

Query: 285 ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
                  +V +WT +I+GF+Q G    A+  + EM   G+ PN  T+ + +SAC+   AL
Sbjct: 254 PE----KNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTVAAVLSACSKSGAL 309

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
             G+ IH   +  G   D  +G SL++MY+KC E++ A  VF  +  KD+ SW +MI G+
Sbjct: 310 GSGIRIHGYILDNGIKLDRAIGTSLLDMYAKCGEVDCAATVFSNMNHKDILSWTAMIQGW 369

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
              G   +A + F +M  S   P+ + +  +++  + +G  D  ++ F  M
Sbjct: 370 AVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSGEVDLGLNFFDSM 420



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/320 (22%), Positives = 147/320 (45%), Gaps = 7/320 (2%)

Query: 25  RDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN 84
           R + +D     G+LN A  V +    +  K     +  L+     +  + +A  L     
Sbjct: 164 RVSLVDMYAKTGQLNHAFQVFEETPDRIKKESILLWNVLVNGYCRAKDMQMATTL---FR 220

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
            + E +    + L+  Y   G L+ A+++FE M E+N+ +W+ +I  +S+   +   +  
Sbjct: 221 SMPERNSGSWSTLIKGYVDNGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAIST 280

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           +F M++ GL P+++    +L AC   G   +G  +H  ++  G+   R +  S+L +Y K
Sbjct: 281 YFEMLEKGLKPNEYTVAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTSLLDMYAK 340

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
           CG++  A   F +M+ KD ++W +MI G+   G   +A + F +M     K   V F  +
Sbjct: 341 CGEVDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAV 400

Query: 265 IRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           + +    G+ D+ +     M     I P +  +  ++    + G+  +A +L   + ++ 
Sbjct: 401 LTACLNSGEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLDEAHEL---VEYMP 457

Query: 324 VMPNGVTITSAISACTDLKA 343
           + P+  T  +   AC   K+
Sbjct: 458 INPDLTTWAALYRACKAHKS 477


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 206/680 (30%), Positives = 340/680 (50%), Gaps = 49/680 (7%)

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
           +I  Y +  E ++  +L   + R          N  +  Y++ G+ D  +++  +M    
Sbjct: 81  LIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQ-- 138

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
              ++ +WT +I+GFA N R  +AL  F +M   G +     ++S + ACT L A+  G 
Sbjct: 139 --RNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGT 196

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           ++H L VK GF  ++ VG++L +MYSKC EL  A + F+ +  KD   W SMI G+ + G
Sbjct: 197 QVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNG 256

Query: 409 YCGKAYELFIKMQESDV-----------------------------------PPNVITWN 433
              KA   ++KM   DV                                          N
Sbjct: 257 DFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGN 316

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
            L   Y ++G+   A ++FQ    +D +  +  S  ++I GY ++ Q   AL  F  ++ 
Sbjct: 317 ALTDMYSKSGDMVSASNVFQI--HSDCI--SIVSLTAIIDGYVEMDQIEKALSTFVDLRR 372

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
               PN  T  S++ ACA         ++HG V++ + +    V ++L+D Y K G   +
Sbjct: 373 RGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDH 432

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           S  +FD + + D I WN+L+  +  HG    A++ F+ M   GLKPN  TF++++   S 
Sbjct: 433 SIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSH 492

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           AGMV+ G   F S+ + Y ++P  EHYS +IDL GR+GKL+EA +FI +MP EP+   W 
Sbjct: 493 AGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWC 552

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
           + L AC+IHG+++ A  A ++L  LEP +     L+  IYA   + ED   +RK+ ++  
Sbjct: 553 SFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGN 612

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIE 788
                G  W++++N  + F    WS      +Y  L N+ + +       ++    + ++
Sbjct: 613 MNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGYVPQTESVLIDMD 672

Query: 789 EEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFL 848
           +  KE++   HSE++A+AF+L+ +      I + KN+R+C  CH   K++S +    I +
Sbjct: 673 DNLKEKLLHYHSERIAVAFSLL-TCPTGMPIIVKKNLRVCSDCHSALKFISKVTERNIIV 731

Query: 849 ADSKCLHHFKNGQCSCGDYW 868
            D    HHF NG CSCGDYW
Sbjct: 732 RDISRFHHFSNGSCSCGDYW 751



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 235/510 (46%), Gaps = 49/510 (9%)

Query: 41  AITVLDSIATQGAKVR-RNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLL 98
           + + L ++   G K+    T  +L+Q    +  ++  ++LHA L     + + F+    L
Sbjct: 58  SFSFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFL 117

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
           ++Y+KCG LD   ++F+ M +RN+ +W+++I  ++ + R++E +  F  M  +G     F
Sbjct: 118 NLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQF 177

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
               +LQAC + G  + G  +H LV+K G  C   V +++  +Y KCG+L  A + FE M
Sbjct: 178 ALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEM 237

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI------------------------ 254
             KD V W SMI G+ + G+  +A   + KM  +++                        
Sbjct: 238 PCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGK 297

Query: 255 -------KLGV--VTF--NILIRSYNQLGQCDVAMEMVKRMESLGITPD---VFTWTCMI 300
                  KLG    TF  N L   Y++ G      +MV       I  D   + + T +I
Sbjct: 298 SLHATILKLGFEYETFIGNALTDMYSKSG------DMVSASNVFQIHSDCISIVSLTAII 351

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
            G+ +  +  +AL  F ++   G+ PN  T TS I AC +   L  G ++H   VK  F 
Sbjct: 352 DGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFK 411

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D  V ++L++MY KC   + + ++FD I++ D  +WN+++  + Q G    A E F  M
Sbjct: 412 RDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGM 471

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
               + PN +T+  L+ G    G  ++ ++ F  M K   V      ++ +I    + G+
Sbjct: 472 IHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGK 531

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
              A      M    F PN     S L AC
Sbjct: 532 LKEAEDFINNMP---FEPNVFGWCSFLGAC 558



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 172/386 (44%), Gaps = 30/386 (7%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVT 87
           +D    NG   +A+T    + T    + ++   + L AC    +    + LHA  L L  
Sbjct: 249 IDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGF 308

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFF 146
           E + F+   L  +Y+K G +  A  VF+   +  ++ + +A+I  Y    +  + +  F 
Sbjct: 309 EYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFV 368

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            + + G+ P++F F  +++AC N    E G  +H  V+K        V ++++ +Y KCG
Sbjct: 369 DLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCG 428

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
               + + F+ ++  D +AWN+++  + Q G    A   F+ M    +K   VTF  L++
Sbjct: 429 LFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLK 488

Query: 267 SYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             +  G  +  +     ME + G+ P    ++C+I    + G+  +A D    M F    
Sbjct: 489 GCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPF---E 545

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG----NS-----LINMYSKC 376
           PN     S + AC          +IH    +  F  D L+     NS     L N+Y+K 
Sbjct: 546 PNVFGWCSFLGAC----------KIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKE 595

Query: 377 EELEAAERVFDMIKDKDV-----YSW 397
           ++ E  + +  MIKD ++     YSW
Sbjct: 596 KQWEDVQSLRKMIKDGNMNKLPGYSW 621



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/411 (22%), Positives = 182/411 (44%), Gaps = 44/411 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N R  EA++    +  +G    +    ++LQAC    +I    ++H   +      ++FV
Sbjct: 154 NSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFV 213

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L  +Y+KCG L DA + FE+M  ++   W++MI  + ++  +++ +  +  MV D +
Sbjct: 214 GSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDV 273

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           F D  +    L AC        GK +H+ ++KLG      + N++  +Y K G ++ A  
Sbjct: 274 FIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASN 333

Query: 214 FFE-SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS----- 267
            F+   D    V+  ++I GY ++ + ++A   F  + R  I+    TF  LI++     
Sbjct: 334 VFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQA 393

Query: 268 ------------------------------YNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                         Y + G  D ++++   +E+    PD   W 
Sbjct: 394 KLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIEN----PDEIAWN 449

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            ++  F+Q+G    A++ F  M   G+ PN VT  + +  C+    +  G+   S   K+
Sbjct: 450 TLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKI 509

Query: 358 -GFTDDVLVGNSLINMYSKCEELEAAER-VFDMIKDKDVYSWNSMIAGYCQ 406
            G        + +I++  +  +L+ AE  + +M  + +V+ W S + G C+
Sbjct: 510 YGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFL-GACK 559



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 105/209 (50%), Gaps = 5/209 (2%)

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           T+  ++   A     NK K++H  ++R     +  + N  ++ Y+K G + Y+  +FD M
Sbjct: 77  TVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKM 136

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
           S +++++W S+I G+  +  +  AL  F QM+  G    +    S++ A +  G +  G 
Sbjct: 137 SQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGT 196

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
           +V C + +C     +    S + D+Y + G+L +A +  E+MP + D+ +W +++     
Sbjct: 197 QVHCLVVKCGFGCELFVG-SNLTDMYSKCGELSDACKAFEEMPCK-DAVLWTSMIDGFVK 254

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           +G+   A+ A  ++      DV I + +L
Sbjct: 255 NGDFKKALTAYMKMV---TDDVFIDQHVL 280


>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 197/583 (33%), Positives = 312/583 (53%), Gaps = 46/583 (7%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P+ F W   +   A+      A+ LF  +    V P+  T +S + AC +L  L+ G  +
Sbjct: 91  PETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRIL 150

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H +  K+GF  ++ + N ++++Y+ C E+                               
Sbjct: 151 HGVVEKVGFRSNLYLQNMIVHLYASCGEM------------------------------- 179

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
           G+A  LF KM + DV    +TWN++I+  I+ G+ + A DLF RM +     RN  SW S
Sbjct: 180 GEARLLFEKMPQRDV----VTWNIMIAQLIKQGDHEGAYDLFSRMPE-----RNVRSWTS 230

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +IAGY Q G+   A+ +F KM+ +    N VT+++VL ACA L A +    IH    R  
Sbjct: 231 MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHG 290

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
            + ++ + N+LID Y K G +  +  +F+ M  + +++W+++I G  +HG    AL LF 
Sbjct: 291 FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFS 350

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
            M   G++PN  TF+ ++ A S  G++  G++ F S+T  Y IIP IEHY  M+DL  R+
Sbjct: 351 DMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRA 410

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           G L EA EFI +MP++P+  +W ALL ACR+H N+++A  AI+ L +L+P +     ++ 
Sbjct: 411 GLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLS 470

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ 770
            IYA  G+ ED  +VRK  ++   + + G   I V  +V+ FV G  S   ++ ++   +
Sbjct: 471 NIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWE 530

Query: 771 NVPENVTAR-----SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNI 825
            + E +  +     +S   L IEE EK +    HSEKLAL F L+ ++ A   IRI+KN+
Sbjct: 531 ELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLM-NTPAETPIRIMKNL 589

Query: 826 RMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           R+C  CH   K +S + + EI + D    H F +  CSC DYW
Sbjct: 590 RICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 141/559 (25%), Positives = 248/559 (44%), Gaps = 72/559 (12%)

Query: 71  NSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE--DMRERNLYTWSA 127
           NS    R++HA  +     + +   T++  V A       A+++F+  + ++   + W++
Sbjct: 39  NSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNS 98

Query: 128 MIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
            + A +      + + LF+ + Q  + PD F    +L+AC N  D   G+++H +V K+G
Sbjct: 99  CLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVG 158

Query: 188 MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
                 ++N ++ +Y  CG++                                EA  LF+
Sbjct: 159 FRSNLYLQNMIVHLYASCGEM-------------------------------GEARLLFE 187

Query: 248 KMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
           KM + +    VVT+NI+I    + G  + A ++  RM       +V +WT MI+G+ Q G
Sbjct: 188 KMPQRD----VVTWNIMIAQLIKQGDHEGAYDLFSRMPER----NVRSWTSMIAGYVQCG 239

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
           +  +A+ LF +M   GV  N VT+ + ++AC DL AL +GM IH  + + GF  +V + N
Sbjct: 240 KAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISN 299

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           +LI+MY KC  LE A +VF+ ++++ V SW++MI G    G   +A  LF  M +  + P
Sbjct: 300 TLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEP 359

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           N +T+  L+      G   E    F  M ++  +      +  ++    + G  + A   
Sbjct: 360 NGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEF 419

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS-----LI 542
              M      PN V   ++L AC      +K  E+    ++  LE  L  +N      L 
Sbjct: 420 ILNMP---MKPNGVVWGALLGACRV----HKNVEMAEEAIKHLLE--LDPLNDGYYVVLS 470

Query: 543 DTYAKSG---NIVYSRTIFDGMSSKDIITWNSLICGYVLHGF-------------WHAAL 586
           + YA++G   +    R        K    W+S+    V+H F             +    
Sbjct: 471 NIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWE 530

Query: 587 DLFDQMKSFGLKPNRGTFL 605
           +L ++M+  G  PN    L
Sbjct: 531 ELLEEMRLKGYVPNTSVVL 549



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 171/378 (45%), Gaps = 46/378 (12%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMR-- 118
           ++L+AC++   +   R LH  +  V    +++++  ++ +YA CG + +AR +FE M   
Sbjct: 133 SVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQR 192

Query: 119 -----------------------------ERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
                                        ERN+ +W++MI  Y +  + +E + LF  M 
Sbjct: 193 DVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKME 252

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           + G+  ++     +L AC + G  + G  +H    + G     R+ N+++ +YVKCG L 
Sbjct: 253 EAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLE 312

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A + FE M+E+  V+W++MI G    G  +EA RLF  M +  I+   VTF  L+ + +
Sbjct: 313 EACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACS 372

Query: 270 QLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
            +G           M    GI P +  + CM+   ++ G   +A +    M    + PNG
Sbjct: 373 HMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMP---MKPNG 429

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN---SLINMYSKCEELEAAERV 385
           V   + + AC   K + M  E    A+K     D L       L N+Y++    E   RV
Sbjct: 430 VVWGALLGACRVHKNVEMAEE----AIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARV 485

Query: 386 FDMIKDKDVYS---WNSM 400
              +KD+ V     W+S+
Sbjct: 486 RKFMKDRQVKKTPGWSSI 503



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 127/282 (45%), Gaps = 43/282 (15%)

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
           +K K  T  WNS +    +     +A+ +F +++     P+  T  SVL AC  L+  + 
Sbjct: 87  EKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSN 146

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN-------- 570
            + +HG V +    S+L + N ++  YA  G +  +R +F+ M  +D++TWN        
Sbjct: 147 GRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIK 206

Query: 571 -----------------------SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
                                  S+I GYV  G    A+ LF +M+  G+K N  T +++
Sbjct: 207 QGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAV 266

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           + A +  G +DLG ++    +  +     +   + +ID+Y + G LEEA +  E+M  E 
Sbjct: 267 LAACADLGALDLGMRIH-EYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME-ER 324

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFD------LEPGDV 703
               W A++    +HG  + A+    RLF       +EP  V
Sbjct: 325 TVVSWSAMIGGLAMHGRAEEAL----RLFSDMSQVGIEPNGV 362


>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 204/579 (35%), Positives = 310/579 (53%), Gaps = 37/579 (6%)

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  +I  + +N  +   + LF E+     +P+  T+   I  C  L  +  G +IH LA+
Sbjct: 84  WNTIIKCYVENQFSHDGIVLFHELVH-EYLPDNFTLPCVIKGCARLGVVQEGKQIHGLAL 142

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K+GF  DV V  SL+NMYSKC E++ A +VFD + DKDV  WNS+I G            
Sbjct: 143 KIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDG------------ 190

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
                       N+++WN +I+GY+++G+ D A++LF +M   D V     +WN +IAGY
Sbjct: 191 ------------NLVSWNAMINGYMKSGDFDSALELFYQMPIWDLV-----TWNLMIAGY 233

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
           +  GQ  +A+ +F  M      P+  T++SVL A + L    K + IH  + +   E   
Sbjct: 234 ELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDG 293

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            +  SLI+ YAK G I  + T+F  +  K +  W ++I G  +HG  + AL LF +M   
Sbjct: 294 ILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKT 353

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           GLKPN   F+ ++ A + AG+VD G++ F  +   Y+I P +EHY  ++D+  R+G LEE
Sbjct: 354 GLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEE 413

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A   IE+MPI P+  IW +LL   R HG ID+   A +R+ ++ P  +    L+  +YA 
Sbjct: 414 AKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAA 473

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN 775
            G  E    VR++  +   R   G   +E K  ++ F+ G  S   +  +Y+ +  + E 
Sbjct: 474 SGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEK 533

Query: 776 V-----TARSSHSGLCIE-EEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCV 829
           +        ++   LCIE E+EKE     HSE+LA+AF LI        IRI+KN+R+C 
Sbjct: 534 LKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGI-PIRIMKNLRVCN 592

Query: 830 HCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            CH   K +S ++  EI + D+   HHFKNG CSC DYW
Sbjct: 593 DCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 631



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 138/455 (30%), Positives = 223/455 (49%), Gaps = 40/455 (8%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYA--KCGCLDDARE 112
            N +++L Q C     +    +LHAF +L T I    FV ++LL++Y+  K   L  AR 
Sbjct: 16  HNLHLSLFQTCSAPQEV---EQLHAF-SLKTAIFNHPFVSSRLLALYSDPKINDLGYARS 71

Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD 172
           +F+ ++ R+L  W+ +I  Y  +Q   + + LF  +V + L PD+F  P +++ C   G 
Sbjct: 72  IFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGV 130

Query: 173 FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISG 232
            + GK +H L +K+G      V+ S++ +Y KCG++  AR+ F+ M +KD V WNS+I G
Sbjct: 131 VQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDG 190

Query: 233 YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
                                    +V++N +I  Y + G  D A+E+  +M       D
Sbjct: 191 ------------------------NLVSWNAMINGYMKSGDFDSALELFYQMPIW----D 222

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           + TW  MI+G+  NG+   A+ +F  M  +G  P+  T+ S +SA + L  L  G  IHS
Sbjct: 223 LVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHS 282

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
              K GF  D ++G SLI MY+KC  +E+A  VF  I+ K V  W ++I G    G    
Sbjct: 283 YMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANH 342

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
           A  LF++M ++ + PN I +  +++     G  D+    F  M    K++     +  L+
Sbjct: 343 ALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLV 402

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
               + G    A      M  S   PN V  +S+L
Sbjct: 403 DILCRAGHLEEAKNTIENMPIS---PNKVIWMSLL 434



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/388 (21%), Positives = 150/388 (38%), Gaps = 124/388 (31%)

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYS--KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           ++H+ ++K    +   V + L+ +YS  K  +L  A  +FD I+ +              
Sbjct: 34  QLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRR-------------- 79

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                ++I WN +I  Y++N    + + LF  +           
Sbjct: 80  ---------------------SLIHWNTIIKCYVENQFSHDGIVLFHELVHE-------- 110

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
                                        + P+  T+  V+  CA L    + K+IHG  
Sbjct: 111 -----------------------------YLPDNFTLPCVIKGCARLGVVQEGKQIHGLA 141

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL-----------ICG 575
           L+    S + V  SL++ Y+K G I  +R +FDGM  KD++ WNSL           I G
Sbjct: 142 LKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMING 201

Query: 576 YVLHGFWHAALDLFDQMK-------------------------------SFGLKPNRGTF 604
           Y+  G + +AL+LF QM                                  G +P+  T 
Sbjct: 202 YMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATL 261

Query: 605 LSIILAHSLAGMVDLGK-KVFCSITE--CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
           +S++ A  ++G+  LGK +   S  E   +++  ++   +++I++Y + G +E A+    
Sbjct: 262 VSVLSA--VSGLAVLGKGRWIHSYMEKNGFELDGILG--TSLIEMYAKCGCIESALTVFR 317

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAV 689
            +  +     W A++    IHG  + A+
Sbjct: 318 AIQ-KKKVGHWTAIIVGLGIHGMANHAL 344



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 118/233 (50%), Gaps = 18/233 (7%)

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA--KSGNIVYSRTIFDGM 561
           LS+   C+   A  +V+++H   L+ ++ +   V + L+  Y+  K  ++ Y+R+IFD +
Sbjct: 20  LSLFQTCS---APQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRI 76

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
             + +I WN++I  YV + F H  + LF ++    L P+  T   +I   +  G+V  GK
Sbjct: 77  QRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGK 135

Query: 622 KVF-CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA-- 678
           ++   ++   +     ++   +++++Y + G+++ A +  + M I+ D  +W +L+    
Sbjct: 136 QIHGLALKIGFGSDVFVQ--GSLVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLIDGNL 192

Query: 679 ----CRIHGNIDLAVL--AIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
                 I+G +       A+E  + +   D++   L++  Y + G+  DA+K+
Sbjct: 193 VSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKM 245


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 194/574 (33%), Positives = 313/574 (54%), Gaps = 39/574 (6%)

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
           + S + AC +   +++G  +H   VK          N+L++MY+KC  L+ A  VFD++ 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI-----SGYIQNGNE 445
            + V +W S+IA Y + G   +A  LF +M    V P++ T   ++     +G ++NG +
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 446 -----------------DEAVDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQ 480
                            +  +D++ + G  +           ++  SWN++I GY +   
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
            N AL +F  M      P+  T+  +LPACA L + ++ KE+HG +LR    S   V N+
Sbjct: 181 PNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           L+D Y K G  V +R +FD + +KD+ITW  +I GY +HGF + A+  F++M+  G++P+
Sbjct: 240 LVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPD 299

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
             +F+SI+ A S +G++D G + F  + +   + P +EHY+ ++DL  RSGKL  A +FI
Sbjct: 300 EVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFI 359

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
           + MPIEPD++IW ALL+ CRIH ++ LA    E +F+LEP +     L+   YA   K E
Sbjct: 360 KSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWE 419

Query: 721 DALKVR-KLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PE 774
           +  K+R K+ R   ++N  G  WIEVK+ V+ F+ G  S   +  +   L+ +      E
Sbjct: 420 EVKKLRQKIGRRGLKKNP-GCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMKEE 478

Query: 775 NVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHET 834
               ++ ++ +  +  +KE     HSEKLA+AF ++    A  TIR+ KN+R+C  CHE 
Sbjct: 479 GYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPA-RTIRVSKNLRVCGDCHEM 537

Query: 835 AKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           AK++S     EI L DS   HHFK+G C C  +W
Sbjct: 538 AKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 177/379 (46%), Gaps = 35/379 (9%)

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           ILQAC NCGD   G+ +H   +K  +       N++L +Y KCG L  A   F+ M  + 
Sbjct: 4   ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-------------YN 269
            V W S+I+ Y + G +DEA RLF +M RE +   + T   ++ +             +N
Sbjct: 64  VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123

Query: 270 QLGQ---------CDVAMEMVKRMESLG---------ITPDVFTWTCMISGFAQNGRTSQ 311
            + +         C+  M+M  +  S+             D+ +W  MI G+++N   ++
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           AL LF +M  + + P+G T+   + AC  L +L  G E+H   ++ GF  D  V N+L++
Sbjct: 184 ALSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVD 242

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MY KC     A  +FDMI  KD+ +W  MIAGY   G+   A   F +M+++ + P+ ++
Sbjct: 243 MYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVS 302

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           +  ++     +G  DE    F  M     VK     +  ++     L +       ++ +
Sbjct: 303 FISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIV---DLLARSGKLAMAYKFI 359

Query: 492 QSSCFYPNCVTILSVLPAC 510
           +S    P+     ++L  C
Sbjct: 360 KSMPIEPDATIWGALLSGC 378



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 199/448 (44%), Gaps = 48/448 (10%)

Query: 61  INLLQACIDSNSIHLARKLHA--FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           +++LQAC +   + L R +H       V     F  T LL +YAKCG LD A  VF+ M 
Sbjct: 2   VSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNT-LLDMYAKCGVLDGAILVFDLMS 60

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
            R + TW+++I AY+R+    E + LF  M ++G+ PD F    +L AC   G  E GK 
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H+ + +  M     V N+++ +Y KCG +  A   F  M  KD ++WN+MI GY +   
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD-------------------VAME 279
            +EA  LF  M   E+K    T   ++ +   L   D                   VA  
Sbjct: 181 PNEALSLFGDMVL-EMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239

Query: 280 MVKRMESLGI------------TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           +V      G+            T D+ TWT MI+G+  +G  + A+  F EM   G+ P+
Sbjct: 240 LVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPD 299

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL------INMYSKCEELEA 381
            V+  S + AC+    L  G    ++       D+  V   L      +++ ++  +L  
Sbjct: 300 EVSFISILYACSHSGLLDEGWRFFNV-----MQDECNVKPKLEHYACIVDLLARSGKLAM 354

Query: 382 AER-VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
           A + +  M  + D   W ++++G C+  +  K  E   +      P N   + +L + Y 
Sbjct: 355 AYKFIKSMPIEPDATIWGALLSG-CRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYA 413

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           +    +E   L Q++G+    K    SW
Sbjct: 414 EAEKWEEVKKLRQKIGRRGLKKNPGCSW 441



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 176/362 (48%), Gaps = 19/362 (5%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID----V 91
           G  +EAI +   +  +G      T   +L AC  + S+   + +H   N + E D    +
Sbjct: 78  GLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH---NYIRENDMQSNI 134

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV   L+ +YAKCG ++DA  VF +M  +++ +W+ MIG YS++    E + LF  MV +
Sbjct: 135 FVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNEALSLFGDMVLE 194

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            + PD      IL AC +    + GK +H  +++ G    ++V N+++ +YVKCG  + A
Sbjct: 195 -MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVDMYVKCGVPVLA 253

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R  F+ +  KD + W  MI+GY   G  + A   F++M +  I+   V+F  ++ + +  
Sbjct: 254 RLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSHS 313

Query: 272 GQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  D        M+    + P +  + C++   A++G+ + A    K M    + P+   
Sbjct: 314 GLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSMP---IEPDATI 370

Query: 331 ITSAISACT---DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             + +S C    D+K LA  +  H   ++   T   ++   L N Y++ E+ E  +++  
Sbjct: 371 WGALLSGCRIHHDVK-LAEKVAEHVFELEPENTGYYVL---LANTYAEAEKWEEVKKLRQ 426

Query: 388 MI 389
            I
Sbjct: 427 KI 428


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 195/617 (31%), Positives = 318/617 (51%), Gaps = 54/617 (8%)

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W   +   A+  +  QAL L+ +M   G  PN  T   A+ +C  L    +G + H    
Sbjct: 8   WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFD--MIKDKDVYSWNSMIAGYCQAGYCGKA 413
           K+G   +  V   LI+MY K   ++ A +VF+      K    +N++++GY     C  A
Sbjct: 68  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127

Query: 414 YELFIKMQESDVPPNVITW-----------------------------------NVLISG 438
             LF +M E  VP N +T                                    N  I+ 
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
           Y++ G+ + A  LF  M       +   SWN++++GY Q G   N L ++R M  +  +P
Sbjct: 188 YMKCGSVNYAQKLFDEM-----PVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHP 242

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           + VT++ VL +CA L A +   E+   +      S+  + N+LI+ YA+ GN+  ++ +F
Sbjct: 243 DPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVF 302

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           DGM  + +++W ++I GY +HG    A+ LF +M   G++P+   F+ ++ A S AG+ D
Sbjct: 303 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 362

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            G + F  +   YQ+ P  EHYS M+DL GR+G+L+EA   IE MPI+PD ++W ALL A
Sbjct: 363 QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 422

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
           C+IH N++LA LA ER+ +LEP ++    L+  IY+     +  L++R + +E   +   
Sbjct: 423 CKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDP 482

Query: 739 GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEIS-- 796
           G  ++E+K  V+ F+ G  +   SD +Y  L+ +   +           E++ +EE +  
Sbjct: 483 GCSYVELKGRVHPFIVGDRNHLQSDEIYRVLEELEAIIMQEFGKP----EKDNREESNKD 538

Query: 797 -----GIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
                G+HSEKLA+AF L+ ++     + I+KN+R+C  CH   K VS + H ++ + D+
Sbjct: 539 GFTRVGVHSEKLAVAFGLLNTTTGAEVV-IIKNLRICEDCHLFFKMVSKIVHRQLTVRDA 597

Query: 852 KCLHHFKNGQCSCGDYW 868
              HHF+NG CSC DYW
Sbjct: 598 TRFHHFRNGSCSCKDYW 614



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/423 (24%), Positives = 193/423 (45%), Gaps = 44/423 (10%)

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           W+  +   ++  ++ + + L+  M++ G  P+ F FP  L++C        G   H  + 
Sbjct: 8   WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQIT 67

Query: 185 KLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES--MDEKDGVAWNSMISGYFQIGENDEA 242
           K+G      V+  ++++Y K   +  AR+ FE      K  V +N+++SGY    +  +A
Sbjct: 68  KVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDA 127

Query: 243 HRLFDKMCREEIKLGVVTF-----------------------------------NILIRS 267
             LF +M  E + +  VT                                    N  I  
Sbjct: 128 VLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITM 187

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           Y + G  + A ++   M   G+     +W  M+SG+AQNG  +  L+L++ M   GV P+
Sbjct: 188 YMKCGSVNYAQKLFDEMPVKGL----ISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPD 243

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            VT+   +S+C +L A ++G E+       GFT +  + N+LINMY++C  L  A+ VFD
Sbjct: 244 PVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFD 303

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
            + ++ + SW ++I GY   G+   A +LF +M  S + P+   +  ++S     G  D+
Sbjct: 304 GMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQ 363

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
            ++ F+ M +N +++     ++ ++    + G+   A  +   M      P+     ++L
Sbjct: 364 GLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMP---IKPDGAVWGALL 420

Query: 508 PAC 510
            AC
Sbjct: 421 GAC 423



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 177/367 (48%), Gaps = 16/367 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFV 93
           N + ++A+ +   +  +G  V   T + L+ AC+   ++ L   LH + L    + DV V
Sbjct: 121 NSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 180

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
               +++Y KCG ++ A+++F++M  + L +W+AM+  Y+++     V+EL+  M  +G+
Sbjct: 181 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 240

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD      +L +C N G    G  +   +   G +    + N+++ +Y +CG L  A+ 
Sbjct: 241 HPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQA 300

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M E+  V+W ++I GY   G  + A +LF +M R  I+     F  ++ + +  G 
Sbjct: 301 VFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGL 360

Query: 274 CDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            D  +E  K M+ +  + P    ++CM+    + GR  +A  L + M    + P+G    
Sbjct: 361 TDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMP---IKPDGAVWG 417

Query: 333 SAISAC-----TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
           + + AC      +L  LA    I      +G+   VL    L N+YS     +   R+  
Sbjct: 418 ALLGACKIHKNVELAELAFERVIELEPENIGYY--VL----LSNIYSNANNSKGVLRIRI 471

Query: 388 MIKDKDV 394
           M+K+K +
Sbjct: 472 MMKEKKL 478



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 113/480 (23%), Positives = 213/480 (44%), Gaps = 44/480 (9%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T L  L    +  +A+++   +   G +    T+   L++C   +   L  + H  +  
Sbjct: 9   NTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQITK 68

Query: 86  VTEI-DVFVKTKLLSVYAKCGCLDDAREVFED-MRERNLYT-WSAMIGAYSRDQRWREVV 142
           V  + + FV+T L+S+Y K   +D+AR+VFE+    R L   ++A++  Y  + +  + V
Sbjct: 69  VGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCSDAV 128

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
            LF  M ++G+  +      ++ AC +  + E G  +H   +K G      V N  + +Y
Sbjct: 129 LLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFITMY 188

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
           +KCG + +A++ F+ M  K  ++WN+M+SGY Q G       L+  M    +    VT  
Sbjct: 189 MKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLV 248

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVF---------------------------- 294
            ++ S   LG   V  E+  +M++ G T + F                            
Sbjct: 249 GVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPER 308

Query: 295 ---TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
              +WT +I G+  +G    A+ LFKEM   G+ P+G      +SAC+       G+E  
Sbjct: 309 TLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYF 368

Query: 352 SLAVKMGFTDDVLVG----NSLINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIAGYCQ 406
            +   M     +  G    + ++++  +   L+ A+ + + +  K D   W +++ G C+
Sbjct: 369 KM---MKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALL-GACK 424

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                +  EL  + +  ++ P  I + VL+S    N N  + V   + M K  K+K++  
Sbjct: 425 IHKNVELAELAFE-RVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPG 483


>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
 gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
          Length = 650

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 206/613 (33%), Positives = 330/613 (53%), Gaps = 50/613 (8%)

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGV--TITSAISACTDLKALAMGMEIHSLAVK 356
           +I    + G  +QAL+L      + + PN    T    I +CT   +L     +H   ++
Sbjct: 45  LIQSLCKQGNLTQALEL------LSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLE 98

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            GF  D  +   LINMYS  + ++ A +VFD  +++ +Y +N++      AG+  +   +
Sbjct: 99  NGFDQDPFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNM 158

Query: 417 FIKMQESDVPPNVITWNVLISG---------YIQNGNEDEA-----------------VD 450
           + +M    +P +  T+  ++            +  G E  A                 VD
Sbjct: 159 YRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVD 218

Query: 451 LFQRMG--------KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM--QSSCFYPNC 500
           ++ + G         N    +N  SW+++IA Y + G+   AL +FR++  ++    PN 
Sbjct: 219 MYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNS 278

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           VT++SVL ACA L A  + + IHG +LR+ L+S LPV+++L+  YA+ G +   + +FD 
Sbjct: 279 VTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQ 338

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           M  +D+++WNSLI  Y +HGF   A+ +F++M   G++P+  +F+S++ A S AG+VD G
Sbjct: 339 MDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEG 398

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
           K +F S+   + I P +EHY+ M+DL GR+ +LEEA + IE+M IEP   +W +LL +CR
Sbjct: 399 KMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCR 458

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           IH N++LA  A  RLFDLEP +     L+  IYA  G  +   +V+KL      +   G+
Sbjct: 459 IHCNVELAERASIRLFDLEPTNAGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGR 518

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP-----ENVTARSSHSGLCIEEEEKEEI 795
            WIEVK  +Y+FV+        + L++ L  +      E    ++      ++  EKE I
Sbjct: 519 SWIEVKRKIYSFVSVDEVNPRMEQLHALLVKLSMELKEEGYVPQTKVVLYDLKAAEKERI 578

Query: 796 SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
              HSEKLA+AF LI SS+    IRI K++R+C  CH   K++S   + EI + D    H
Sbjct: 579 VLGHSEKLAVAFGLINSSKG-EVIRITKSLRLCEDCHSFTKFISKFANKEILVRDVNRFH 637

Query: 856 HFKNGQCSCGDYW 868
           HF++G CSCGDYW
Sbjct: 638 HFRDGVCSCGDYW 650



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/297 (29%), Positives = 155/297 (52%), Gaps = 12/297 (4%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNS----IHLARKLHA-FLNLV 86
           L G+G   E + +   + + G    R TY  +L+AC+ S      ++  R++HA  L   
Sbjct: 148 LAGHGE--EVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHG 205

Query: 87  TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF- 145
            +  V + T L+ +YAK GC+ +A  VF  M  +N+ +WSAMI  Y+++ +  E +ELF 
Sbjct: 206 YDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFR 265

Query: 146 --FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
              L  QD L P+      +LQAC      E G+L+H  +++ G+  +  V ++++ +Y 
Sbjct: 266 ELMLETQD-LCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYA 324

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           +CGKL   +R F+ MD++D V+WNS+IS Y   G   +A  +F++M    ++   ++F  
Sbjct: 325 RCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVS 384

Query: 264 LIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           ++ + +  G  D    +   M  + GI P V  + CM+    +  R  +A  + + M
Sbjct: 385 VLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENM 441



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/476 (23%), Positives = 213/476 (44%), Gaps = 66/476 (13%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           LC  G L +A+ +L S+    A+   +TY  L+ +C   NS+  A+++H   L    + D
Sbjct: 49  LCKQGNLTQALELL-SLEPNPAQ---HTYELLILSCTHQNSLLDAQRVHRHLLENGFDQD 104

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            F+ TKL+++Y+    +D+AR+VF+  R R +Y ++A+  A S      EV+ ++  M  
Sbjct: 105 PFLATKLINMYSFFDSIDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNS 164

Query: 151 DGLFPDDFLFPKILQACGNCGDF----EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            G+  D F +  +L+AC     F      G+ +H+ +++ G      +  +++ +Y K G
Sbjct: 165 IGIPSDRFTYTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFG 224

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK-------MCREEIKLGVV 259
            +  A   F  M  K+ V+W++MI+ Y + G+  EA  LF +       +C   + +  V
Sbjct: 225 CVSNASCVFNQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSV 284

Query: 260 ------------------------------TFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
                                           + L+  Y + G+ ++   +  +M+    
Sbjct: 285 LQACAALAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKR-- 342

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG-M 348
             DV +W  +IS +  +G   +A+ +F+EM++ GV P+ ++  S + AC+    +  G M
Sbjct: 343 --DVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKM 400

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAGYCQA 407
             +S+ V  G    V     ++++  +   LE A ++ + ++ +     W S++ G C+ 
Sbjct: 401 LFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLL-GSCRI 459

Query: 408 GYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
            +C         ++  D+ P               GN     D++   G  D VKR
Sbjct: 460 -HCNVELAERASIRLFDLEPT------------NAGNYVLLADIYAEAGMWDGVKR 502



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/370 (24%), Positives = 169/370 (45%), Gaps = 41/370 (11%)

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD----LKALAMGM 348
           ++ +  +    +  G   + L++++ M+ +G+  +  T T  + AC      +  L  G 
Sbjct: 136 IYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLNKGR 195

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           EIH+  ++ G+   V +  +L++MY+K   +  A  VF+ +  K+V SW++MIA Y + G
Sbjct: 196 EIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYAKNG 255

Query: 409 YCGKAYELF--IKMQESDVPPNVITW---------------NVLISGYIQNGNEDEA--- 448
              +A ELF  + ++  D+ PN +T                  LI GYI     D     
Sbjct: 256 KAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSILPV 315

Query: 449 ----VDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
               V ++ R GK        +   KR+  SWNSLI+ Y   G    A+G+F +M  +  
Sbjct: 316 ISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTYNGV 375

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCV-LRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
            P+ ++ +SVL AC++    ++ K +   + +   +  S+     ++D   ++  +  + 
Sbjct: 376 EPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAA 435

Query: 556 TIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSL 613
            I + M        W SL+    +H   +  L     ++ F L+P N G ++ +   ++ 
Sbjct: 436 KIIENMRIEPGPKVWGSLLGSCRIH--CNVELAERASIRLFDLEPTNAGNYVLLADIYAE 493

Query: 614 AGMVDLGKKV 623
           AGM D  K+V
Sbjct: 494 AGMWDGVKRV 503


>gi|8671867|gb|AAF78430.1|AC018748_9 Contains similarity to glycerine-rich protein from Nicotiana glauca
           gb|AF151215 and contains multiple PPR PF|01535 repeats
           [Arabidopsis thaliana]
          Length = 816

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 227/720 (31%), Positives = 362/720 (50%), Gaps = 28/720 (3%)

Query: 44  VLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYA 102
           V+  I+ +G   R N  +        SN   + +K   FL    T   +F     +S +A
Sbjct: 2   VMRPISNKGLIYRHNICLRCNSTLAVSNHEPITQKTRNFLETTTTSTAIFQCNSQISKHA 61

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
           + G L +A  +F  M  R++ +W AMI AY+ + +  +  ++F  M        + +   
Sbjct: 62  RNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITA 121

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK- 221
           +++    C   +A +L   +  K  +S       +++  +V+ G+   A   +     K 
Sbjct: 122 MIK--NKCDLGKAYELFCDIPEKNAVSYA-----TMITGFVRAGRFDEAEFLYAETPVKF 174

Query: 222 -DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM 280
            D VA N ++SGY + G+ +EA R+F  M  +E    VV+ + ++  Y ++G+   A  +
Sbjct: 175 RDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKE----VVSCSSMVHGYCKMGRIVDARSL 230

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACT 339
             RM       +V TWT MI G+ + G       LF  M   G V  N  T+     AC 
Sbjct: 231 FDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           D      G +IH L  +M    D+ +GNSL++MYSK   +  A+ VF ++K+KD  SWNS
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           +I G  Q     +AYELF KM   D+    ++W  +I G+   G   + V+LF  M + D
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMMPEKD 402

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
            +     +W ++I+ +   G    AL  F KM      PN  T  SVL A A L    + 
Sbjct: 403 NI-----TWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
            +IHG V++ ++ + L V NSL+  Y K GN   +  IF  +S  +I+++N++I GY  +
Sbjct: 458 LQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYN 517

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
           GF   AL LF  ++S G +PN  TFL+++ A    G VDLG K F S+   Y I P  +H
Sbjct: 518 GFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDH 577

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
           Y+ M+DL GRSG L++A   I  MP +P S +W +LL+A + H  +DLA LA ++L +LE
Sbjct: 578 YACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELE 637

Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSE 759
           P       ++ Q+Y+I GK  D  ++  +++    +   G  WI +K  V+ F+ G  S+
Sbjct: 638 PDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQ 697


>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
 gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
          Length = 867

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 239/857 (27%), Positives = 403/857 (47%), Gaps = 117/857 (13%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYI--NLLQACIDSNSIHLARKLHAFLNLVTEI 89
           LC + R NEA++         A  + +  +   +L++C    + +L + LH+++     +
Sbjct: 10  LCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHSYVVKQGHV 69

Query: 90  DVFVKTK-LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRW-REVVELFFL 147
              V +K LL++YAKCG LDD  ++F+     +   W+ ++  YSR  +   +V+++F  
Sbjct: 70  SCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRA 129

Query: 148 MVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M   G + P       +L  C   G+   GK +H  VIK G        N+++++Y KCG
Sbjct: 130 MHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCG 189

Query: 207 KLIW-ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-NIL 264
            +   A   F+S+  KD V+WN+MI+G  + G   EA  LF  M +  +K    T  NIL
Sbjct: 190 LVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANIL 249

Query: 265 -----------------IRSY--------------NQLGQCDVAMEMVKRMESL---GIT 290
                            I SY              N L    + +   K  ESL      
Sbjct: 250 PVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDA 309

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGME 349
            D+ +W  +I+G+A NG   ++L +F  + S   ++ + VT+ S + AC  L  L  G +
Sbjct: 310 RDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQ 369

Query: 350 IHSLAVKMGFT-DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           +H+  ++  F  +D   GN+L++ Y+KC  +E A   F MI  KD+ SWNS++  + +  
Sbjct: 370 VHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKR 429

Query: 409 YCGKAYELFIKMQESDVPPNVIT------------------------------------- 431
           +  +   L   M + D+ P+ +T                                     
Sbjct: 430 HHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPT 489

Query: 432 -WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ---------- 480
             N ++  Y + GN + A  +FQ + +    KRN  + NSLI+GY  LG           
Sbjct: 490 VGNAILDAYSKCGNIEYANKMFQNLSE----KRNLVTCNSLISGYVGLGSHYDANMIFSG 545

Query: 481 ---------------------KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
                                   AL +F K+Q+    P+ VTI+S++P C  + + + +
Sbjct: 546 MSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLL 605

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
           ++ HG ++R S E  L +  +L+D YAK G I Y+  IF     KD++ + ++I GY +H
Sbjct: 606 RQCHGYIIRSSFE-DLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMH 664

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
           G    AL+ F  M + G+KP+   F SI+ A S AG +  G K+F SI + + + P IE 
Sbjct: 665 GMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQ 724

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
           ++ ++DL  R G + EA  F+  +PIE +++IW  LL AC+ +  ++L  +  ++LF +E
Sbjct: 725 FACVVDLLARGGHVSEAYSFVTKIPIEANANIWGTLLGACKTYHEVELGRIVADKLFKIE 784

Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSE 759
             D+    ++  +YA   + +  ++VRK+ R    +   G  WIEV+     FV G  S 
Sbjct: 785 ANDIGNYIVLSNLYAADDRWDGVMEVRKMMRNKDLKKPAGCSWIEVERTNNIFVVGDCSH 844

Query: 760 SYSDLLYSWLQNVPENV 776
              +L+YS L  + + V
Sbjct: 845 PQRNLIYSTLCTLDQQV 861



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 188/729 (25%), Positives = 308/729 (42%), Gaps = 162/729 (22%)

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQD--GLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
           TW++ I +   D R  E +  F   ++D     PD  +   IL++C        GK +HS
Sbjct: 2   TWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHS 61

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND- 240
            V+K G         ++L +Y KCG L    + F+     D V WN ++SGY + G+ND 
Sbjct: 62  YVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDA 121

Query: 241 EAHRLFDKM-CREEIKLGVVTFNILI----RSYNQLGQCDVAMEMVK---RMESLG---- 288
           +  ++F  M    E+    VT   ++    RS N  G   V   ++K    M++      
Sbjct: 122 DVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNAL 181

Query: 289 ---------------------ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
                                I  DV +W  MI+G A+NG   +A  LF  M    V PN
Sbjct: 182 VSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPN 241

Query: 328 GVTITSAISACTDLK---ALAMGMEIHSLAVKMG-FTDDVLVGNSLINMYSKCEELEAAE 383
             T+ + +  C       A   G +IHS  ++    + DV V N+L++ Y K    + AE
Sbjct: 242 YATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAE 301

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE------------SDVPP---- 427
            +F  +  +D+ SWN++IAGY   G   K+  +F  +              S +P     
Sbjct: 302 SLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQL 361

Query: 428 ---------------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                +    N L+S Y + G  +EA   F  + + D +     
Sbjct: 362 DNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLI----- 416

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           SWNS++  + +    +  L +   M      P+ VTIL+++  CA L+   KVKEIHG  
Sbjct: 417 SWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYS 476

Query: 527 LRRS--LESSLP-VMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLHG-- 580
           +R    L ++ P V N+++D Y+K GNI Y+  +F  +S K +++T NSLI GYV  G  
Sbjct: 477 IRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSH 536

Query: 581 ----------------FWH-------------AALDLFDQMKSFGLKPNRGTFLSIIL-- 609
                            W+              AL+LF ++++ G+KP+  T +S+I   
Sbjct: 537 YDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVC 596

Query: 610 --------------------------------AHSLAGMVDLGKKVFCSITECYQIIPMI 637
                                           A++  G++    K+F S  +   ++   
Sbjct: 597 TQMASVHLLRQCHGYIIRSSFEDLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVM--- 653

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIE---DMPIEPDSSIWEALLTACRIHGNI--DLAVL-A 691
             ++AMI  Y   G  E+A+E      +M I+PD  I+ ++L+AC   G I   L +  +
Sbjct: 654 --FTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDS 711

Query: 692 IERLFDLEP 700
           IE++  ++P
Sbjct: 712 IEKIHGMKP 720


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 204/641 (31%), Positives = 342/641 (53%), Gaps = 41/641 (6%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           LI  Y + G    A ++   + S      + TW  MIS    +G++ +A++ +  M   G
Sbjct: 41  LIDGYIKCGSLAEARKLFDELPS----RHIVTWNSMISSHISHGKSKEAVEFYGNMLMEG 96

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF-TDDVLVGNSLINMYSKCEELEAA 382
           V+P+  T ++   A + L  +  G   H LAV +G    D  V ++L++MY+K +++  A
Sbjct: 97  VLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDA 156

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV-------- 434
             VF  + +KDV  + ++I GY Q G  G+A ++F  M    V PN  T           
Sbjct: 157 HLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNL 216

Query: 435 --LISGYIQNG------------NEDEAVDLFQRMGK-NDKVK-------RNTASWNSLI 472
             L++G + +G            ++   + ++ R     D +K        N  +W S +
Sbjct: 217 GDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFV 276

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
            G  Q G++  A+ +FR+M      PN  T+ S+L AC+ L      ++IH   ++  L+
Sbjct: 277 VGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLD 336

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
            +     +LI+ Y K GN+  +R++FD ++  D++  NS+I  Y  +GF H AL+LF+++
Sbjct: 337 GNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERL 396

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
           K+ GL PN  TF+SI+LA + AG+V+ G ++F SI   + I   I+H++ MIDL GRS +
Sbjct: 397 KNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRR 456

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQI 712
           LEEA   IE++   PD  +W  LL +C+IHG +++A   + ++ +L PGD     L+  +
Sbjct: 457 LEEAAMLIEEVR-NPDVVLWRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNL 515

Query: 713 YAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
           YA  GK    ++++   R+   + S    W++V   V+TF+ G  S   S  ++  L  +
Sbjct: 516 YASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGL 575

Query: 773 PENVT--ARSSHSGLCIEE-EEKEEISGI--HSEKLALAFALIGSSQAPHTIRIVKNIRM 827
            + V     + ++   +++ +E+++IS +  HSEKLA+A+AL  +     TIRI KN+R+
Sbjct: 576 MKKVKTLGYNPNTRFVLQDLDEEKKISSLYYHSEKLAIAYALWKTIGRTTTIRIFKNLRV 635

Query: 828 CVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           C  CH   K+VS++   +I   DSK  HHFK G CSC DYW
Sbjct: 636 CGDCHSWIKFVSLLTGRDIIARDSKRFHHFKGGLCSCKDYW 676



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 234/492 (47%), Gaps = 50/492 (10%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           N Y +L+     + S+   R +H  +        F+  KL+  Y KCG L +AR++F+++
Sbjct: 2   NFYSSLIAQSAHTKSLTTLRAVHTNVIKSGFSYSFLGHKLIDGYIKCGSLAEARKLFDEL 61

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             R++ TW++MI ++    + +E VE +  M+ +G+ PD + F  I +A    G    G+
Sbjct: 62  PSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQ 121

Query: 178 LMHSLVIKLGMSCVRR-VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
             H L + LG+  +   V ++++ +Y K  K+  A   F  + EKD V + ++I GY Q 
Sbjct: 122 RAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQH 181

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG------------------------ 272
           G + EA ++F+ M    +K    T   ++ +   LG                        
Sbjct: 182 GLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQ 241

Query: 273 --------QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
                   +C++  + +K    L     V TWT  + G  QNGR   A+ +F+EM    +
Sbjct: 242 TSLLTMYSRCNMIEDSIKVFNQLDYANQV-TWTSFVVGLVQNGREEVAVSIFREMIRCSI 300

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            PN  T++S + AC+ L  L +G +IH++ +K+G   +   G +LIN+Y KC  ++ A  
Sbjct: 301 SPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARS 360

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           VFD++ + DV + NSMI  Y Q G+  +A ELF +++   + PN +T+  ++      G 
Sbjct: 361 VFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGL 420

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY------P 498
            +E   +F  +  N  ++     +  +I          + LG  R+++ +         P
Sbjct: 421 VEEGCQIFASIRNNHNIELTIDHFTCMI----------DLLGRSRRLEEAAMLIEEVRNP 470

Query: 499 NCVTILSVLPAC 510
           + V   ++L +C
Sbjct: 471 DVVLWRTLLNSC 482



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/470 (23%), Positives = 220/470 (46%), Gaps = 39/470 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV--TEIDVF 92
           +G+  EA+    ++  +G      T+  + +A      I   ++ H    ++    +D F
Sbjct: 79  HGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVLDGF 138

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V + L+ +YAK   + DA  VF  + E+++  ++A+I  Y++     E +++F  MV  G
Sbjct: 139 VASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYAQHGLDGEALKIFEDMVNRG 198

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P+++    IL  CGN GD   G+L+H LV+K G+  V   + S+L +Y +C  +  + 
Sbjct: 199 VKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVASQTSLLTMYSRCNMIEDSI 258

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + F  +D  + V W S + G  Q G  + A  +F +M R  I     T + ++++ + L 
Sbjct: 259 KVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLA 318

Query: 273 QCDVAMEMVKRMESLGITP-------------------------------DVFTWTCMIS 301
             +V  ++      LG+                                 DV     MI 
Sbjct: 319 MLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIY 378

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
            +AQNG   +AL+LF+ +  +G++PNGVT  S + AC +   +  G +I + +++     
Sbjct: 379 AYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFA-SIRNNHNI 437

Query: 362 DVLVGN--SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
           ++ + +   +I++  +   LE A  + + +++ DV  W +++      G    A ++  K
Sbjct: 438 ELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCKIHGEVEMAEKVMSK 497

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
           + E   P +  T  +L + Y   G  ++ +++   + ++ K+K++ A SW
Sbjct: 498 ILEL-APGDGGTHILLTNLYASAGKWNQVIEMKSTI-RDLKLKKSPAMSW 545



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/311 (23%), Positives = 139/311 (44%), Gaps = 17/311 (5%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  NGR   A+++   +          T  ++LQAC     + +  ++HA  + L  + +
Sbjct: 279 LVQNGREEVAVSIFREMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGN 338

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            +    L+++Y KCG +D AR VF+ + E ++   ++MI AY+++    E +ELF  +  
Sbjct: 339 KYAGAALINLYGKCGNMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKN 398

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            GL P+   F  IL AC N G  E G ++  S+     +         ++ +  +  +L 
Sbjct: 399 MGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLE 458

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-Y 268
            A    E +   D V W ++++     GE + A ++  K+   E+  G    +IL+ + Y
Sbjct: 459 EAAMLIEEVRNPDVVLWRTLLNSCKIHGEVEMAEKVMSKIL--ELAPGDGGTHILLTNLY 516

Query: 269 NQLGQCDVAMEMVKRMESLGITPD-VFTWT-------CMISGFAQNGRTSQALD----LF 316
              G+ +  +EM   +  L +      +W          ++G   + R+ +  +    L 
Sbjct: 517 ASAGKWNQVIEMKSTIRDLKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLM 576

Query: 317 KEMSFVGVMPN 327
           K++  +G  PN
Sbjct: 577 KKVKTLGYNPN 587



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 93/180 (51%), Gaps = 4/180 (2%)

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           S++   A+  +   ++ +H  V++     S  + + LID Y K G++  +R +FD + S+
Sbjct: 6   SLIAQSAHTKSLTTLRAVHTNVIKSGFSYSF-LGHKLIDGYIKCGSLAEARKLFDELPSR 64

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
            I+TWNS+I  ++ HG    A++ +  M   G+ P+  TF +I  A S  G++  G++  
Sbjct: 65  HIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAH 124

Query: 625 -CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
             ++    +++      SA++D+Y +  K+ +A   +    +E D  ++ AL+     HG
Sbjct: 125 GLAVVLGLEVLDGFV-ASALVDMYAKFDKMRDA-HLVFRRVLEKDVVLFTALIVGYAQHG 182


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  338 bits (866), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 208/739 (28%), Positives = 370/739 (50%), Gaps = 63/739 (8%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DV     ++  YA+ G +  A+ +F+ M ER++ +W++++  Y  +   R+ +E+F  M 
Sbjct: 71  DVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFVRMR 130

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
              +  D   F  +L+AC    D+  G  +H L I++G        ++++ +Y KC KL 
Sbjct: 131 SLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLD 190

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-- 267
            A R F  M E++ V W+++I+GY Q     E  +LF  M +  + +   T+  + RS  
Sbjct: 191 GAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCA 250

Query: 268 ---------------------YNQL---------GQCDVAMEMVKRMESLGITPDVFTWT 297
                                Y+ +          +CD   +  K   +L   P   ++ 
Sbjct: 251 GLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLP-NPPRQSYN 309

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            +I G+A+  +  +AL++F+ +    +  + ++++ A++AC+ +K    G+++H LAVK 
Sbjct: 310 AIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKC 369

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           G   ++ V N++++MY KC  L  A  +FD ++ +D  SWN++IA + Q     K   LF
Sbjct: 370 GLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLF 429

Query: 418 IKMQESDVPPNVITWNVLISG-----YIQNGNE-----------------DEAVDLFQRM 455
           + M  S + P+  T+  ++        +  G E                    VD++ + 
Sbjct: 430 VSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKC 489

Query: 456 GK-------NDKVK-RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           G        +D+++ + T SWNS+I+G+    Q  NA   F +M      P+  T  +VL
Sbjct: 490 GMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVL 549

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
             CA +      K+IH  +L+ +L S + + ++L+D Y+K GN+  SR +F+    +D +
Sbjct: 550 DVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYV 609

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
           TW+++IC Y  HG    A+ LF++M+   +KPN   F+S++ A +  G VD G   F  +
Sbjct: 610 TWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIM 669

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
              Y + P +EHYS M+DL GRS ++ EA++ IE M  E D  IW  LL+ C++ GN+++
Sbjct: 670 QSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEV 729

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
           A  A   L  L+P D     L+  +YA  G   +  K+R + +    +   G  WIEV++
Sbjct: 730 AEKAFNSLLQLDPQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRD 789

Query: 748 LVYTFVTGGWSESYSDLLY 766
            V+TF+ G  +   S+ +Y
Sbjct: 790 EVHTFLVGDKAHPRSEEIY 808



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 155/652 (23%), Positives = 282/652 (43%), Gaps = 121/652 (18%)

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
           F F  ILQ C N      GK  H+ +I         V N ++  Y K   + +A + F+ 
Sbjct: 7   FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
           M  +D ++WN+MI GY +IG    A  LFD M   +    VV++N L+  Y   G    +
Sbjct: 67  MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERD----VVSWNSLLSCYLHNGVNRKS 122

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
           +E+  RM SL I  D  T++ +                                   + A
Sbjct: 123 IEIFVRMRSLKIPHDYATFSVV-----------------------------------LKA 147

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C+ ++   +G+++H LA++MGF +DV+ G++L++MYSKC++L+ A R+F  + ++++  W
Sbjct: 148 CSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCW 207

Query: 398 NSMIAGYCQAGYCGKAYELFIKM-----------------------------------QE 422
           +++IAGY Q     +  +LF  M                                    +
Sbjct: 208 SAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALK 267

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
           SD   + I     +  Y +     +A  +F  +    +      S+N++I GY +  Q  
Sbjct: 268 SDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPR-----QSYNAIIVGYARQDQGL 322

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
            AL +F+ +Q +    + +++   L AC+ +    +  ++HG  ++  L  ++ V N+++
Sbjct: 323 KALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTIL 382

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
           D Y K G +V + TIFD M  +D ++WN++I  +  +      L LF  M    ++P+  
Sbjct: 383 DMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDF 442

Query: 603 TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           T+ S++ A +    ++ G ++   I +    +      SA++D+YG+ G L EA E I D
Sbjct: 443 TYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVG-SALVDMYGKCGMLMEA-EKIHD 500

Query: 663 -----------------------------------MPIEPDSSIWEALLTACRIHGNIDL 687
                                              M + PD+  +  +L  C     I+L
Sbjct: 501 RLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIEL 560

Query: 688 AVLAIERLFDLE-PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
                 ++  L    DV I   ++ +Y+ CG  +D+    +L  E T +  +
Sbjct: 561 GKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDS----RLMFEKTPKRDY 608


>gi|334183275|ref|NP_175765.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806499|sp|Q9C8L6.2|PPR80_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g53600, mitochondrial; Flags: Precursor
 gi|332194847|gb|AEE32968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 717

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 227/720 (31%), Positives = 362/720 (50%), Gaps = 28/720 (3%)

Query: 44  VLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYA 102
           V+  I+ +G   R N  +        SN   + +K   FL    T   +F     +S +A
Sbjct: 2   VMRPISNKGLIYRHNICLRCNSTLAVSNHEPITQKTRNFLETTTTSTAIFQCNSQISKHA 61

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
           + G L +A  +F  M  R++ +W AMI AY+ + +  +  ++F  M        + +   
Sbjct: 62  RNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITA 121

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK- 221
           +++    C   +A +L   +  K  +S       +++  +V+ G+   A   +     K 
Sbjct: 122 MIK--NKCDLGKAYELFCDIPEKNAVSYA-----TMITGFVRAGRFDEAEFLYAETPVKF 174

Query: 222 -DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM 280
            D VA N ++SGY + G+ +EA R+F  M  +E    VV+ + ++  Y ++G+   A  +
Sbjct: 175 RDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKE----VVSCSSMVHGYCKMGRIVDARSL 230

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACT 339
             RM       +V TWT MI G+ + G       LF  M   G V  N  T+     AC 
Sbjct: 231 FDRMTE----RNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           D      G +IH L  +M    D+ +GNSL++MYSK   +  A+ VF ++K+KD  SWNS
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           +I G  Q     +AYELF KM   D+    ++W  +I G+   G   + V+LF  M + D
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMMPEKD 402

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
            +     +W ++I+ +   G    AL  F KM      PN  T  SVL A A L    + 
Sbjct: 403 NI-----TWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
            +IHG V++ ++ + L V NSL+  Y K GN   +  IF  +S  +I+++N++I GY  +
Sbjct: 458 LQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYN 517

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
           GF   AL LF  ++S G +PN  TFL+++ A    G VDLG K F S+   Y I P  +H
Sbjct: 518 GFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDH 577

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
           Y+ M+DL GRSG L++A   I  MP +P S +W +LL+A + H  +DLA LA ++L +LE
Sbjct: 578 YACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELE 637

Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSE 759
           P       ++ Q+Y+I GK  D  ++  +++    +   G  WI +K  V+ F+ G  S+
Sbjct: 638 PDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQ 697


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 193/576 (33%), Positives = 310/576 (53%), Gaps = 47/576 (8%)

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           +AI+AC + +AL  G ++H+  VK  +   V +   LI +Y +C  L+ A  V D + ++
Sbjct: 46  AAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPER 105

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-------------- 438
           +V SW +MI+GY Q+G   +A ELFI+M  +    N  T   +++               
Sbjct: 106 NVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVH 165

Query: 439 ---------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
                                Y ++GN  EA  +F  + +     R+T S  ++I+GY Q
Sbjct: 166 SLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPE-----RDTVSCTAIISGYAQ 220

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
           LG  + AL +FR++ SS    N VT  ++L + + L + N  K++HG +LR+ L   + +
Sbjct: 221 LGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVL 280

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
            NSLID Y+K G ++YSR +FD M  +  I+WN+++ GY  HG     + LF  M    +
Sbjct: 281 QNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTE-EV 339

Query: 598 KPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
           KP+  T L+++   S  G+VD G  +F  I +    +  I HY  +IDL GRSG+L++A+
Sbjct: 340 KPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKAL 399

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICG 717
           + IE MP EP  +IW +LL ACR+H N+ +  +  ++L D+EPG+     ++  IYA  G
Sbjct: 400 DLIEHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAG 459

Query: 718 KPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT 777
             +D  +VRKL  ENT      + WI +  +++TF +          + + ++ V  +V 
Sbjct: 460 MWKDVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVK 519

Query: 778 ARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCH 832
           A      L      +++E+KE +   HSEKLA+ F L+ +     TI+++KN+R+CV CH
Sbjct: 520 AAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGL-TIQVMKNLRICVDCH 578

Query: 833 ETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             AK+VS ++  EI L D    H  K+G C+CGDYW
Sbjct: 579 NFAKFVSKVYGREISLRDKNRFHLLKDGACTCGDYW 614



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 217/457 (47%), Gaps = 38/457 (8%)

Query: 47  SIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCG 105
           S+A  GA  R + Y   + AC++  ++   R++HA +        V++ T+L+ +Y +CG
Sbjct: 31  SLAVPGADARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCG 90

Query: 106 CLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQ 165
            LDDAR V + M ERN+ +W+AMI  YS+  R  E +ELF  M++ G   ++F    +L 
Sbjct: 91  ALDDARNVLDGMPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLT 150

Query: 166 ACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA 225
           +C      +  + +HSLV+K        V +S+L +Y K G +  AR+ F+ + E+D V+
Sbjct: 151 SCPVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVS 210

Query: 226 WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA-------- 277
             ++ISGY Q+G +DEA  LF ++    ++   VTF  L+ S + L   +          
Sbjct: 211 CTAIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLIL 270

Query: 278 --------------MEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALD 314
                         ++M  +   L  +  VF         +W  M+ G+ ++G   + + 
Sbjct: 271 RKELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQ 330

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN--SLINM 372
           LF+ M+   V P+ VT+ + +S C+    +  G++I  L VK      + +G+   +I++
Sbjct: 331 LFRTMT-EEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQ-NAVIHIGHYGCVIDL 388

Query: 373 YSKCEELEAAERVFDMIKDKDVYS-WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
             +  +L+ A  + + +  +   + W S++ G C+        E+  +      P N   
Sbjct: 389 LGRSGQLQKALDLIEHMPFEPTPAIWGSLL-GACRVHINVSVGEVVAQKLLDMEPGNAGN 447

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           + +L + Y   G   +   + + M +N   K    SW
Sbjct: 448 YVILSNIYAAAGMWKDVFRVRKLMLENTVTKEPAKSW 484



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 153/307 (49%), Gaps = 38/307 (12%)

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
           +GE  + H     M +   +  V     LI  Y + G  D A  ++  M       +V +
Sbjct: 57  LGEGRQVHA---HMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMPE----RNVVS 109

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           WT MISG++Q+GR ++AL+LF  M   G   N  T+ + +++C   +++    ++HSL V
Sbjct: 110 WTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVV 169

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K  F   + VG+SL++MY K   ++ A +VFDM+ ++D  S  ++I+GY Q G   +A +
Sbjct: 170 KTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALD 229

Query: 416 LFIKMQESDVPPNVITWNVLIS---------------GYIQNGN-------EDEAVDLFQ 453
           LF ++  S +  N +T+  L++               G I           ++  +D++ 
Sbjct: 230 LFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYS 289

Query: 454 RMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           + GK        ++  +R+  SWN+++ GY + G     + +FR M      P+ VT+L+
Sbjct: 290 KCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTEEV-KPDSVTLLA 348

Query: 506 VLPACAY 512
           VL  C++
Sbjct: 349 VLSGCSH 355



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 151/293 (51%), Gaps = 7/293 (2%)

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
           D   + +++ I    +    G+  ++   M ++   P V     LI  Y++ G  D+A +
Sbjct: 38  DARFHDYDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARN 97

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +   M +     RN  SW ++I+GY Q G+   AL +F +M  +    N  T+ +VL +C
Sbjct: 98  VLDGMPE-----RNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSC 152

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
               +  +V+++H  V++ + ES + V +SL+D Y KSGNI  +R +FD +  +D ++  
Sbjct: 153 PVHQSIQQVEQVHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCT 212

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC 630
           ++I GY   G    ALDLF Q+ S G++ N  TF +++ + S    ++ GK+V   I   
Sbjct: 213 AIISGYAQLGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILR- 271

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
            ++   I   +++ID+Y + GKL  +    ++MP     S W A+L     HG
Sbjct: 272 KELPFFIVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAIS-WNAMLMGYGRHG 323



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 153/306 (50%), Gaps = 6/306 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           +GR  EA+ +   +   G K    T   +L +C    SI    ++H+ +     E  +FV
Sbjct: 120 SGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFV 179

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + LL +Y K G + +AR+VF+ + ER+  + +A+I  Y++     E ++LF  +   G+
Sbjct: 180 GSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGM 239

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             +   F  +L +         GK +H L+++  +     ++NS++ +Y KCGKL+++RR
Sbjct: 240 QCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLIDMYSKCGKLLYSRR 299

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F++M ++  ++WN+M+ GY + G   E  +LF  M  EE+K   VT   ++   +  G 
Sbjct: 300 VFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMT-EEVKPDSVTLLAVLSGCSHGGL 358

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            D  +++   + +       +  + C+I    ++G+  +ALDL + M F    P      
Sbjct: 359 VDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLIEHMPF---EPTPAIWG 415

Query: 333 SAISAC 338
           S + AC
Sbjct: 416 SLLGAC 421


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 232/756 (30%), Positives = 375/756 (49%), Gaps = 93/756 (12%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           F +IL++C    D   GK +H++ +K  +     + N  + +Y KC  L  A   F    
Sbjct: 11  FRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTH 70

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
           E +  ++N++I+ Y +      AH L                      ++Q+ Q      
Sbjct: 71  EPNVFSFNALIAAYAKESLIHVAHHL----------------------FDQIPQ------ 102

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
                      PD+ ++  +I+ +A  G T  AL LF EM  +G++ +G T +  I+AC 
Sbjct: 103 -----------PDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACC 151

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD--KDVYSW 397
           +   L    ++HSLA   GF   V V NSL+  YSK   LE AE VF+ + +  +D  SW
Sbjct: 152 NHVGLIR--QLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSW 209

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY----------------IQ 441
           NSMI  Y Q     KA  L+  M       ++ T   +++ +                I+
Sbjct: 210 NSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIK 269

Query: 442 NG-NEDEAV-----DLFQRMGKNDKVKR---------NTASWNSLIAGYQQLGQKN-NAL 485
            G N++  V     D++ + G      R         +   WN++I+GY Q  + +  AL
Sbjct: 270 TGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEAL 329

Query: 486 GVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS-LPVMNSLIDT 544
             FR+MQ + ++P+  + +  + AC+ L + ++ K+ H   ++  + S+ + V N+L+  
Sbjct: 330 ECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTM 389

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           Y+K GN+  +R +F  M   + +T NS+I GY  HG    +L+LF+QM +  + P   T 
Sbjct: 390 YSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITL 449

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           +SI+ A +  G V+ GKK F  + + + I P  EHYS MIDL GR+GKL EA   I+ MP
Sbjct: 450 VSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMP 509

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
             P S+ W ALL ACR +GN++LA  A  +   LEP + +   ++  +Y+   K E+A +
Sbjct: 510 FSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAAR 569

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES-------YSDLLYSWLQN---VPE 774
           +RKL R+   R   G  WIE+   V+ FV    S         Y D ++  ++    VP+
Sbjct: 570 IRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEIHMYLDEMFVKMKRAGYVPD 629

Query: 775 NVTA--RSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCH 832
              A  +   +G    E+EKE +   HSEKLA+AF L+ +      + +VKN+R+C  CH
Sbjct: 630 VRWAFVKDDETG----EQEKEIMLAHHSEKLAVAFGLLFTKHG-EPLLVVKNLRICGDCH 684

Query: 833 ETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              K++S +   +I + D+   H F++G+CSCGDYW
Sbjct: 685 NAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 142/546 (26%), Positives = 233/546 (42%), Gaps = 62/546 (11%)

Query: 2   FIWILTTFQQ-LHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTY 60
           F W L +F+Q L S +  K          D L G       +  L   +T       N +
Sbjct: 4   FSWTLQSFRQILKSCIANK----------DLLTGKSLHTIYLKSLIPSST----YLSNHF 49

Query: 61  INLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           I L   C    + H     HAF N   E +VF    L++ YAK   +  A  +F+ + + 
Sbjct: 50  ILLYSKCNLLTTAH-----HAF-NQTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQP 103

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           +L +++ +I AY+        + LF  M + GL  D F F  ++ AC  C      + +H
Sbjct: 104 DLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITAC--CNHVGLIRQLH 161

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE--KDGVAWNSMISGYFQIGE 238
           SL    G      V+NS+L  Y K G L  A   F  M E  +D V+WNSMI  Y Q   
Sbjct: 162 SLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKR 221

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSY------------------------------ 268
             +A  L+  M     ++ + T   ++ ++                              
Sbjct: 222 GLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSG 281

Query: 269 --NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTS-QALDLFKEMSFVGVM 325
             +   +C   M   +++       D+  W  MISG++QN   S +AL+ F++M   G  
Sbjct: 282 LIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYW 341

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGF-TDDVLVGNSLINMYSKCEELEAAER 384
           P+  +   AISAC++L + + G + H+LA+K    ++ + V N+L+ MYSKC  L+ A +
Sbjct: 342 PDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARK 401

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           +F  +   +  + NS+IAGY Q G   ++  LF +M  + + P  IT   ++S     G 
Sbjct: 402 LFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGR 461

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            +E    F  M     ++     ++ +I     LG+        R + +  F P      
Sbjct: 462 VEEGKKYFNMMKDIFGIEPEAEHYSCMI---DLLGRAGKLSEAERLIDTMPFSPGSAAWA 518

Query: 505 SVLPAC 510
           ++L AC
Sbjct: 519 ALLGAC 524



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 122/493 (24%), Positives = 217/493 (44%), Gaps = 58/493 (11%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T ++     G    A+++   +   G  +   T+  ++ AC   N + L R+LH+ L  
Sbjct: 109 NTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACC--NHVGLIRQLHS-LAF 165

Query: 86  VTEIDVFV--KTKLLSVYAKCGCLDDAREVFEDMRE--RNLYTWSAMIGAYSRDQRWREV 141
            +  D +V  K  LL+ Y+K G L++A  VF  M E  R+  +W++MI AY + +R  + 
Sbjct: 166 SSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKA 225

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
           + L+  MV  G   D F    +L       D   G   H+  IK G +  R V + ++ +
Sbjct: 226 LALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDM 285

Query: 202 YVKCGK-LIWARRFFESMDEKDGVAWNSMISGYFQIGE-NDEAHRLFDKMCR-------- 251
           Y KCG  +  +R+ FE +   D V WN+MISGY Q  E + EA   F +M R        
Sbjct: 286 YAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDC 345

Query: 252 ---------------------------EEIKLGVVTF-NILIRSYNQLGQCDVAMEMVKR 283
                                       EI    ++  N L+  Y++ G    A ++ +R
Sbjct: 346 SFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQR 405

Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
           M       +  T   +I+G+AQ+G  +++L+LF++M    + P  +T+ S +SAC     
Sbjct: 406 MPQ----HNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGR 461

Query: 344 LAMGMEIHSLAVKM-GFTDDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMI 401
           +  G +  ++   + G   +    + +I++  +  +L  AER+ D +       +W +++
Sbjct: 462 VEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALL 521

Query: 402 AG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
                Y       KA   F++++    P N + + +L S Y      +EA  + + M   
Sbjct: 522 GACRKYGNMELAEKAANQFLQLE----PTNAVPYIMLASMYSAARKWEEAARIRKLMRDR 577

Query: 459 DKVKRNTASWNSL 471
              K+   SW  L
Sbjct: 578 GIRKKPGCSWIEL 590


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 204/617 (33%), Positives = 316/617 (51%), Gaps = 45/617 (7%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           ++ +WT MISG +QN + S+A+  F  M   G +P     +SAI AC  L ++ MG ++H
Sbjct: 5   NLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMH 64

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
            LA+K G   ++ VG++L +MYSKC  +  A +VF+ +  KD  SW +MI GY + G   
Sbjct: 65  CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFE 124

Query: 412 KAYELFIKMQESDVP-----------------------------------PNVITWNVLI 436
           +A   F KM + +V                                     ++   N L 
Sbjct: 125 EALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALT 184

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
             Y + G+ + A ++F      D   RN  S+  LI GY +  Q    L VF +++    
Sbjct: 185 DMYSKAGDMESASNVFGI----DSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            PN  T  S++ ACA   A  +  ++H  V++ + +    V + L+D Y K G +  +  
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
            FD +     I WNSL+  +  HG    A+ +F++M   G+KPN  TF+S++   S AG+
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 360

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           V+ G   F S+ + Y ++P  EHYS +IDL GR+G+L+EA EFI  MP EP++  W + L
Sbjct: 361 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL 420

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
            ACRIHG+ ++  LA E+L  LEP +     L+  IYA   + ED   VR   R+   + 
Sbjct: 421 GACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKK 480

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA-----RSSHSGLCIEEEE 791
             G  W++V    + F    WS      +Y  L  + + + A     R+    L +++  
Sbjct: 481 LPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDSM 540

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           KE++   HSE++A+AFALI S      I + KN+R+CV CH   K++S +   +I + D+
Sbjct: 541 KEKLLHRHSERIAVAFALI-SMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDN 599

Query: 852 KCLHHFKNGQCSCGDYW 868
              HHF +G CSCGDYW
Sbjct: 600 SRFHHFTDGSCSCGDYW 616



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 200/426 (46%), Gaps = 35/426 (8%)

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M +RNL +W+AMI   S++ ++ E +  F  M   G  P  F F   ++AC + G  E G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           K MH L +K G+     V +++  +Y KCG +  A + FE M  KD V+W +MI GY +I
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF-- 294
           GE +EA   F KM  EE+ +        + +   L  C     +   +  LG   D+F  
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 295 ------------------------------TWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
                                         ++TC+I G+ +  +  + L +F E+   G+
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            PN  T +S I AC +  AL  G ++H+  +K+ F +D  V + L++MY KC  LE A +
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQ 300

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
            FD I D    +WNS+++ + Q G    A ++F +M +  V PN IT+  L++G    G 
Sbjct: 301 AFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGL 360

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            +E +D F  M K   V      ++ +I    + G+   A     +M    F PN     
Sbjct: 361 VEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMP---FEPNAFGWC 417

Query: 505 SVLPAC 510
           S L AC
Sbjct: 418 SFLGAC 423



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 123/532 (23%), Positives = 232/532 (43%), Gaps = 59/532 (11%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  N + +EAI     +   G    +  + + ++AC    SI + +++H   L      +
Sbjct: 16  LSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSE 75

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +FV + L  +Y+KCG + DA +VFE+M  ++  +W+AMI  YS+   + E +  F  M+ 
Sbjct: 76  LFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMID 135

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + +  D  +    L ACG     + G+ +HS V+KLG      V N++  +Y K G +  
Sbjct: 136 EEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMES 195

Query: 211 ARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-- 267
           A   F    E ++ V++  +I GY +  + ++   +F ++ R+ I+    TF+ LI++  
Sbjct: 196 ASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACA 255

Query: 268 ------------------------------YNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                          +  G+C +  + ++  + +G  P    W 
Sbjct: 256 NQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIG-DPTEIAWN 314

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVK 356
            ++S F Q+G    A+ +F+ M   GV PN +T  S ++ C+    +  G++  +S+   
Sbjct: 315 SLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKT 374

Query: 357 MGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQA---GYCGK 412
            G        + +I++  +   L EA E +  M  + + + W S + G C+       GK
Sbjct: 375 YGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFL-GACRIHGDKEMGK 433

Query: 413 -AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
            A E  +K++     P      VL+S    N  + E V   +   ++  VK+        
Sbjct: 434 LAAEKLVKLE-----PKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKK-------- 480

Query: 472 IAGYQ--QLGQKNNALGV--FRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
           + GY    +G K +  G   +   + S  Y    T+L  + A  Y+  ++ V
Sbjct: 481 LPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSV 532



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/306 (23%), Positives = 132/306 (43%), Gaps = 49/306 (16%)

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
           +RN  SW ++I+G  Q  + + A+  F  M+     P      S + ACA L +    K+
Sbjct: 3   QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ 62

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           +H   L+  + S L V ++L D Y+K G +  +  +F+ M  KD ++W ++I GY   G 
Sbjct: 63  MHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGE 122

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILA------------------------------- 610
           +  AL  F +M    +  ++    S + A                               
Sbjct: 123 FEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNA 182

Query: 611 ----HSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME-FIE--DM 663
               +S AG ++    VF   +EC  ++     Y+ +ID Y  + ++E+ +  F+E    
Sbjct: 183 LTDMYSKAGDMESASNVFGIDSECRNVVS----YTCLIDGYVETEQIEKGLSVFVELRRQ 238

Query: 664 PIEPDSSIWEALLTACRIHGNID----LAVLAIERLFDLEPGDVLIQRLILQIYAICGKP 719
            IEP+   + +L+ AC     ++    L    ++  FD +P    +  +++ +Y  CG  
Sbjct: 239 GIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDP---FVSSILVDMYGKCGLL 295

Query: 720 EDALKV 725
           E A++ 
Sbjct: 296 EQAIQA 301


>gi|347954486|gb|AEP33743.1| chlororespiratory reduction 21, partial [Lobularia maritima]
          Length = 734

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 205/710 (28%), Positives = 367/710 (51%), Gaps = 46/710 (6%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-- 89
           L  NG +NEA+ ++  +  +  ++    +  +LQ C+    +   +++HA +    E   
Sbjct: 26  LSKNGEINEALRLVTEMDFRNLRIGPEIFGEILQGCVYDRDLSTGKQIHARVLKNGEFYS 85

Query: 90  -DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            + +++TKL+  YAKC  L+ +  +F  +R RN+++W+A++G  SR     + +  F  M
Sbjct: 86  RNEYIETKLVVFYAKCDDLEISESLFSRLRIRNVFSWAAIVGVRSRIGFSEDALTGFVEM 145

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           ++  + PD+F+ P + +ACG       G+ +H  V+K  +     V +S+  +Y K G L
Sbjct: 146 LETEISPDNFVVPNVCKACGVLRWSRFGRSVHGFVMKSRLHDCVFVASSLADMYGKRGFL 205

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI----- 263
             AR+ F+ + E++ VAWN+M+ GY Q G N+EA RL   M  E I+   VT ++     
Sbjct: 206 DDARKVFDEIPERNVVAWNAMMVGYVQNGMNEEAIRLLSDMKEEGIEPTRVTVSMCLSAS 265

Query: 264 ------------------------------LIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
                                         L+  Y ++G  + A  +  RM    I  DV
Sbjct: 266 ANIGGIEEGKQSHAVAIVNGLEMDNILGTSLLNFYCKVGLIEYAEMVFDRM----IGKDV 321

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            TW  +ISG+ Q G    A+D+ + M    +  + VT+++ +S     + L +G E+   
Sbjct: 322 VTWNLLISGYVQQGLVENAIDMCRLMRVENLKFDCVTLSTLMSVAARTRDLKLGKEVLCY 381

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            ++  F  D+ + ++ ++MY++C  +  A++VFD    KD+  WN+++A Y ++G+ G+A
Sbjct: 382 CIRHSFESDIGLASTAVDMYAECGSVVDAKKVFDATVQKDLILWNALLAAYTESGHSGEA 441

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
             LF +MQ   VPPNVIT N+++   + NG   EA ++F +M ++  +  N  SW +++ 
Sbjct: 442 LRLFYEMQLQSVPPNVITRNLIMRSLLGNGQVSEAKEMFSQM-QSSGIFPNLISWTTMMN 500

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR-RSLE 532
           G  Q G    A+   RKM  S   PN V+I   L ACA L + +    IHG ++R +   
Sbjct: 501 GLVQNGCSEEAILFLRKMLESGARPNTVSIAIALSACANLASLHLGTSIHGYIIRNQQHS 560

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDG--MSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           SS+ V  SL+D YAK G+I  +  +F     S  ++  + ++I  Y L+G    A+ L+ 
Sbjct: 561 SSVLVDTSLVDMYAKCGDINKAERVFGSKLYSEFELPLYGAMISAYALYGKLKEAVTLYR 620

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
            ++  G++P+  T  S++ A   AG      ++F  +   + + P +EHYS M++L   +
Sbjct: 621 NLEEIGIEPDDKTITSLLSACKNAGDTKQAIEIFAGMVSKHGMKPCLEHYSLMVELLASA 680

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
           G++E+A+  +E+MP +PD+ + ++LL +C      +L     + L   EP
Sbjct: 681 GEVEKALRLVEEMPYKPDARVIQSLLDSCNKQHKTELMEYISKHLVVFEP 730



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 206/445 (46%), Gaps = 35/445 (7%)

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG- 358
           +S  ++NG  ++AL L  EM F  +          +  C   + L+ G +IH+  +K G 
Sbjct: 23  VSSLSKNGEINEALRLVTEMDFRNLRIGPEIFGEILQGCVYDRDLSTGKQIHARVLKNGE 82

Query: 359 -FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            ++ +  +   L+  Y+KC++LE +E +F  ++ ++V+SW +++    + G+   A   F
Sbjct: 83  FYSRNEYIETKLVVFYAKCDDLEISESLFSRLRIRNVFSWAAIVGVRSRIGFSEDALTGF 142

Query: 418 IKMQESDVPPN------------VITWNVL---ISGYIQNGNEDEAV-------DLFQRM 455
           ++M E+++ P+            V+ W+     + G++      + V       D++ + 
Sbjct: 143 VEMLETEISPDNFVVPNVCKACGVLRWSRFGRSVHGFVMKSRLHDCVFVASSLADMYGKR 202

Query: 456 GKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           G  D  +        RN  +WN+++ GY Q G    A+ +   M+     P  VT+   L
Sbjct: 203 GFLDDARKVFDEIPERNVVAWNAMMVGYVQNGMNEEAIRLLSDMKEEGIEPTRVTVSMCL 262

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
            A A +    + K+ H   +   LE    +  SL++ Y K G I Y+  +FD M  KD++
Sbjct: 263 SASANIGGIEEGKQSHAVAIVNGLEMDNILGTSLLNFYCKVGLIEYAEMVFDRMIGKDVV 322

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
           TWN LI GYV  G    A+D+   M+   LK +  T  +++   +    + LGK+V C  
Sbjct: 323 TWNLLISGYVQQGLVENAIDMCRLMRVENLKFDCVTLSTLMSVAARTRDLKLGKEVLCYC 382

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
              +     I   S  +D+Y   G + +A +   D  ++ D  +W ALL A    G+   
Sbjct: 383 IR-HSFESDIGLASTAVDMYAECGSVVDAKKVF-DATVQKDLILWNALLAAYTESGHSGE 440

Query: 688 AV-LAIERLFDLEPGDVLIQRLILQ 711
           A+ L  E      P +V+ + LI++
Sbjct: 441 ALRLFYEMQLQSVPPNVITRNLIMR 465



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 154/359 (42%), Gaps = 55/359 (15%)

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
           RN  SW +++    ++G   +AL  F +M  +   P+   + +V  AC  L  S   + +
Sbjct: 117 RNVFSWAAIVGVRSRIGFSEDALTGFVEMLETEISPDNFVVPNVCKACGVLRWSRFGRSV 176

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           HG V++  L   + V +SL D Y K G +  +R +FD +  ++++ WN+++ GYV +G  
Sbjct: 177 HGFVMKSRLHDCVFVASSLADMYGKRGFLDDARKVFDEIPERNVVAWNAMMVGYVQNGMN 236

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH--- 639
             A+ L   MK  G++P R T    + A +  G ++ GK+     +    I+  +E    
Sbjct: 237 EEAIRLLSDMKEEGIEPTRVTVSMCLSASANIGGIEEGKQ-----SHAVAIVNGLEMDNI 291

Query: 640 -YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV-----LAIE 693
             +++++ Y + G +E A E + D  I  D   W  L++     G ++ A+     + +E
Sbjct: 292 LGTSLLNFYCKVGLIEYA-EMVFDRMIGKDVVTWNLLISGYVQQGLVENAIDMCRLMRVE 350

Query: 694 -----------------RLFDLEPG--------------DVLIQRLILQIYAICGKPEDA 722
                            R  DL+ G              D+ +    + +YA CG   DA
Sbjct: 351 NLKFDCVTLSTLMSVAARTRDLKLGKEVLCYCIRHSFESDIGLASTAVDMYAECGSVVDA 410

Query: 723 LKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW-LQNVPENVTARS 780
            KV           +  +  I    L+  +   G S     L Y   LQ+VP NV  R+
Sbjct: 411 KKVFDA--------TVQKDLILWNALLAAYTESGHSGEALRLFYEMQLQSVPPNVITRN 461



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 5/200 (2%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--N 84
           T ++ L  NG   EAI  L  +   GA+    +    L AC +  S+HL   +H ++  N
Sbjct: 497 TMMNGLVQNGCSEEAILFLRKMLESGARPNTVSIAIALSACANLASLHLGTSIHGYIIRN 556

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFED--MRERNLYTWSAMIGAYSRDQRWREVV 142
                 V V T L+ +YAKCG ++ A  VF      E  L  + AMI AY+   + +E V
Sbjct: 557 QQHSSSVLVDTSLVDMYAKCGDINKAERVFGSKLYSEFELPLYGAMISAYALYGKLKEAV 616

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
            L+  + + G+ PDD     +L AC N GD  +A ++   +V K GM       + ++ +
Sbjct: 617 TLYRNLEEIGIEPDDKTITSLLSACKNAGDTKQAIEIFAGMVSKHGMKPCLEHYSLMVEL 676

Query: 202 YVKCGKLIWARRFFESMDEK 221
               G++  A R  E M  K
Sbjct: 677 LASAGEVEKALRLVEEMPYK 696


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 201/661 (30%), Positives = 339/661 (51%), Gaps = 41/661 (6%)

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
           ++++ K+    ++ G      L+   + +G+   A ++  +       PDVF W  ++  
Sbjct: 92  NQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPD----PDVFLWNAIVRC 147

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           ++++G    A++++  M    V P+G +    + AC+ L AL MG  +H    + GF  D
Sbjct: 148 YSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESD 207

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V V N L+ +Y+KC E+  A  VF  + D+ + SW S+I+GY Q G   +A  +F +M++
Sbjct: 208 VFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRK 267

Query: 423 SDVPPNVITWNVLISGY----------------IQNGNEDE------AVDLFQRMGK--- 457
           ++V P+ I    ++  Y                I+ G E E         L+ + G    
Sbjct: 268 TNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMV 327

Query: 458 -----NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
                N     +   WN++I+GY + G    A+ +FR M+S    P+ +T+ S + ACA 
Sbjct: 328 ARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQ 387

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 572
           + +    + +   +      + + V  SLIDTYAK G++  +R +FD +  KD++ W+++
Sbjct: 388 IGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAM 447

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQ 632
           + GY LHG    ++ LF  M+  G+ PN  TF+ ++ A   +G+V+ G  +F  + + Y 
Sbjct: 448 MVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRD-YG 506

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAI 692
           I P  +HY+ ++DL GR+G L+ A  F+ +MPIEP  S+W ALL+AC+IH ++ L   A 
Sbjct: 507 IEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVTLGEYAA 566

Query: 693 ERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTF 752
           ERLF L+P +      +  +YA     +   KVR L RE       G   IE+   +  F
Sbjct: 567 ERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEINGKLQAF 626

Query: 753 VTGGWSESYSDLLYSWLQNVPENVTARS--SHSGLCIEE---EEKEEISGIHSEKLALAF 807
             G  +   S  ++  ++++   +       H+   + +   EE EE    HSE+LA+A+
Sbjct: 627 QAGDKTHPRSKEIFEEVEDLERRLKEAGFVPHTESVLHDLNYEETEETLCNHSERLAIAY 686

Query: 808 ALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
            LI S+    T+RI KN+R C +CH   K +S +   EI + D+   HHFK+G CSCGDY
Sbjct: 687 GLI-STPPGTTLRITKNLRACDNCHAAIKLISKLVSREIVVRDACRFHHFKDGACSCGDY 745

Query: 868 W 868
           W
Sbjct: 746 W 746



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 204/395 (51%), Gaps = 31/395 (7%)

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           F+  KL++  +  G +  AR++F+   + +++ W+A++  YSR   +   +E++  M   
Sbjct: 108 FLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVA 167

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            + PD F FP +L+AC      E G+ +H  + + G      V+N ++A+Y KCG+++ A
Sbjct: 168 CVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRA 227

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
              F  + ++  V+W S+ISGY Q G+  EA R+F +M +  ++   +    ++R+Y  +
Sbjct: 228 NAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDV 287

Query: 272 GQ---------CDVAME---------------------MVKRMESLGI-TPDVFTWTCMI 300
                      C + M                      MV R+    +  P +  W  MI
Sbjct: 288 EDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMI 347

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           SG+ +NG   +A++LF+ M    + P+ +T+TS+I+AC  + +L +   +        F 
Sbjct: 348 SGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFR 407

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
           +DV+V  SLI+ Y+KC  ++ A  VFD I DKDV  W++M+ GY   G   ++  LF  M
Sbjct: 408 NDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAM 467

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           +++ V PN +T+  L++    +G  +E  DLF RM
Sbjct: 468 RQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM 502



 Score =  142 bits (357), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 175/378 (46%), Gaps = 41/378 (10%)

Query: 63  LLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
           +L+AC    ++ + R++H        E DVFV+  L+++YAKCG +  A  VF  + +R 
Sbjct: 179 VLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRT 238

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
           + +W+++I  Y+++ +  E + +F  M +  + PD      +L+A  +  D E GK +H 
Sbjct: 239 IVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHG 298

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
            VIK+G+ C   +  S+ ++Y KCG ++ AR FF  ++    + WN+MISGY + G  +E
Sbjct: 299 CVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEE 358

Query: 242 AHRLFDKMCREEIKLGVVTF-----------------------------------NILIR 266
           A  LF  M  + I+   +T                                      LI 
Sbjct: 359 AIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLID 418

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
           +Y + G  D+A  +  R+       DV  W+ M+ G+  +G+  +++ LF  M   GV P
Sbjct: 419 TYAKCGSVDMARFVFDRIPD----KDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSP 474

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER-V 385
           N VT    ++AC +   +  G ++       G          ++++  +   L+ A   V
Sbjct: 475 NDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYNFV 534

Query: 386 FDMIKDKDVYSWNSMIAG 403
            +M  +  V  W ++++ 
Sbjct: 535 MNMPIEPGVSVWGALLSA 552



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 8/219 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           NG   EAI +   + ++  +    T  + + AC    S+ LAR +  ++++     DV V
Sbjct: 353 NGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIV 412

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+  YAKCG +D AR VF+ + ++++  WSAM+  Y    + RE + LF  M Q G+
Sbjct: 413 NTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGV 472

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+D  F  +L AC N G  E G  +   +   G+    +    V+ +  + G L  A  
Sbjct: 473 SPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHLDRAYN 532

Query: 214 FFESMDEKDGVA-WNSMISG-----YFQIGENDEAHRLF 246
           F  +M  + GV+ W +++S      +  +GE   A RLF
Sbjct: 533 FVMNMPIEPGVSVWGALLSACKIHRHVTLGEY-AAERLF 570



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/206 (18%), Positives = 93/206 (45%), Gaps = 36/206 (17%)

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
           +    + +I+  +L   L+    ++  L++  +  G +  +R +FD     D+  WN+++
Sbjct: 86  IHKTHLNQIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIV 145

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI------ 627
             Y  HGF+  A++++ +M+   + P+  +F  ++ A S    +++G++V   I      
Sbjct: 146 RCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFE 205

Query: 628 -------------TECYQII-----------PMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
                         +C +I+             I  ++++I  Y ++G+  EA+    +M
Sbjct: 206 SDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEM 265

Query: 664 P---IEPDSSIWEALLTACRIHGNID 686
               + PD   W AL++  R + +++
Sbjct: 266 RKTNVRPD---WIALVSVLRAYTDVE 288


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 234/804 (29%), Positives = 390/804 (48%), Gaps = 97/804 (12%)

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+      ++ AC   G+  AG+ +HS +          + N+++++Y KCG LI A++ 
Sbjct: 5   PNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQA 64

Query: 215 FESM---DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE----------------IK 255
           F+ +    ++D V WN+MIS + + G   EA +LF  M  +                 ++
Sbjct: 65  FDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVE 124

Query: 256 LGVVTF----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
            G+++                         L+ SY +LG  D A E+  R      +  +
Sbjct: 125 AGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSL 184

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL---KALAMGMEI 350
            T + MIS   QNG   ++L LF  M+  G  P+GVT+ S ++AC+ L    A A  +E 
Sbjct: 185 VTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLE- 243

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
            ++ V     D+VL G +L+  Y++  +L  A   FD I+  DV SWN+M A Y Q    
Sbjct: 244 QAMEVVSATRDNVL-GTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRP 302

Query: 411 GKAYELFIKMQESDVPPNVITW-------------------------------------- 432
            +A  LF +M    V P+V T+                                      
Sbjct: 303 REALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVA 362

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           N  ++ Y + G+  +A  +F+R+      +R+  +WNS++A Y   G    A  +F+ M+
Sbjct: 363 NATLNMYAKCGSLADARAVFERI---SPTRRDCITWNSMLAAYGHHGLGKEAFELFQAME 419

Query: 493 SSCFY-PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
           +     PN VT ++VL A     +  + +EIH  V+    ES   + N+L++ YAK G++
Sbjct: 420 AEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSL 479

Query: 552 VYSRTIFDGMSS--KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
             ++ IFD  SS  +D+I W SL+ GY  +G    AL LF  M+  G++PN  TF+S + 
Sbjct: 480 DDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALT 539

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDS 669
           A +  G ++ G ++   +T  + I+P  +H+S ++DL GR G+L+EA + +E    + D 
Sbjct: 540 ACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADV 598

Query: 670 SIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLE 729
             W ALL AC+    ++      ER+  L+P       ++  +YA  G+  +A  +RK  
Sbjct: 599 ITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTM 658

Query: 730 RENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS--SHSGLC- 786
            +   R   G   +EV   +++F  G  S   S+ +Y  L+ +  ++ A    + +GL  
Sbjct: 659 LDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGLVL 718

Query: 787 --IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
             + +E KE +   HSEKLA+AF L+ S+ +   +R++KN+R+C  CH   K +S +   
Sbjct: 719 HDVSQEHKERLLMRHSEKLAIAFGLM-STPSGSPLRVIKNLRVCSDCHTATKLISKVTGR 777

Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
           +I + DS   HHF +G CSCGDYW
Sbjct: 778 DILMRDSSRYHHFTSGTCSCGDYW 801



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 176/613 (28%), Positives = 281/613 (45%), Gaps = 102/613 (16%)

Query: 54  KVRRNTY--INLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDA 110
           +VR N +  I L+ AC    ++   R++H+ ++    E +  +   L+S+Y+KCG L DA
Sbjct: 2   EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61

Query: 111 REVFEDM---RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL-FPDDFLFPKILQA 166
           ++ F+ +    +R++ TW+AMI A+ R+   RE ++LF  M  DG   P+   F  +L +
Sbjct: 62  KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS 121

Query: 167 CGNCG--DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL--IWARRFFESMDEKD 222
           C   G    E  + +H  ++  G+     VR +++  Y K G L   W   F    DE+ 
Sbjct: 122 CVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAW-EVFLRKSDEEP 180

Query: 223 G---VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL--GQC--- 274
               V  ++MIS  +Q G   E+ RLF  M  E  K   VT   ++ + + L  G     
Sbjct: 181 STSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAF 240

Query: 275 --DVAMEMVK--RMESLGIT-----------------------PDVFTWTCMISGFAQNG 307
             + AME+V   R   LG T                       PDV +W  M + + Q+ 
Sbjct: 241 VLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHH 300

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK---ALAMGMEIHSLAVKMGFTDDVL 364
           R  +AL LF+ M   GV P+  T  +A++AC       A A+G  I SL  + G   D  
Sbjct: 301 RPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTA 360

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKD--KDVYSWNSMIAGYCQAGYCGKAYELFIKMQ- 421
           V N+ +NMY+KC  L  A  VF+ I    +D  +WNSM+A Y   G   +A+ELF  M+ 
Sbjct: 361 VANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEA 420

Query: 422 ESDVPPNVITW-----------------------------------NVLISGYIQNGNED 446
           E  V PN +T+                                   N L++ Y + G+ D
Sbjct: 421 EKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLD 480

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           +A  +F +   N   + +  +W SL+AGY Q GQ   AL +F  MQ     PN +T +S 
Sbjct: 481 DAQAIFDKSSSN---QEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISA 537

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS------LIDTYAKSGNIVYSRTIFDG 560
           L AC +     K+++  GC L   +     ++ +      ++D   + G +  +  + + 
Sbjct: 538 LTACNH---GGKLEQ--GCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLER 592

Query: 561 MSSKDIITWNSLI 573
            S  D+ITW +L+
Sbjct: 593 TSQADVITWMALL 605



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 207/468 (44%), Gaps = 53/468 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQAC----IDSNSIHLARKLHAFLNLVTEI- 89
           NG   E++ +  ++  +G K    T +++L AC    + S +  +   L   + +V+   
Sbjct: 197 NGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFV---LEQAMEVVSATR 253

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D  + T LL+ YA+   L  AR  F+ ++  ++ +W+AM  AY +  R RE + LF  M+
Sbjct: 254 DNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERML 313

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEA---GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            +G+ P    F   L AC       A   GK + SL+ + G+     V N+ L +Y KCG
Sbjct: 314 LEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCG 373

Query: 207 KLIWARRFFE--SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-IKLGVVTF-- 261
            L  AR  FE  S   +D + WNSM++ Y   G   EA  LF  M  E+ +K   VTF  
Sbjct: 374 SLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVA 433

Query: 262 ---------------------------------NILIRSYNQLGQCDVAMEMVKRMESLG 288
                                            N L+  Y + G  D A  +  +  S  
Sbjct: 434 VLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSS-- 491

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
              DV  WT +++G+AQ G+  +AL LF  M   GV PN +T  SA++AC     L  G 
Sbjct: 492 NQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGC 551

Query: 349 EIHS-LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
           E+ S +    G        + ++++  +C  L+ AE++ +     DV +W +++     +
Sbjct: 552 ELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTSQADVITWMALLDACKNS 611

Query: 408 GYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
               +      ++ + D P    ++ VL S Y   G  +EA  + + M
Sbjct: 612 KELERGERCAERIMQLD-PEVASSYIVLASMYAAAGRWNEAATIRKTM 658


>gi|15220333|ref|NP_171976.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75192500|sp|Q9MAT2.1|PPR10_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g04840
 gi|7211995|gb|AAF40466.1|AC004809_24 F13M7.17 [Arabidopsis thaliana]
 gi|332189629|gb|AEE27750.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 201/585 (34%), Positives = 306/585 (52%), Gaps = 21/585 (3%)

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
           F    +I G  +N R   ++  F  M  +GV P+ +T    + + + L    +G  +H+ 
Sbjct: 92  FVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAA 151

Query: 354 AVKMGFTD-DVLVGNSLINMYSKCEELEAAERVF----DMIKDKDVYSWNSMIAGYCQAG 408
            +K  F D D  V  SL++MY+K  +L+ A +VF    D IK + +  WN +I GYC+A 
Sbjct: 152 TLK-NFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAK 210

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
               A  LF  M E     N  +W+ LI GY+ +G  + A  LF+ M +     +N  SW
Sbjct: 211 DMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMPE-----KNVVSW 261

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
            +LI G+ Q G    A+  + +M      PN  TI +VL AC+   A      IHG +L 
Sbjct: 262 TTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILD 321

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
             ++    +  +L+D YAK G +  + T+F  M+ KDI++W ++I G+ +HG +H A+  
Sbjct: 322 NGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQC 381

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F QM   G KP+   FL+++ A   +  VDLG   F S+   Y I P ++HY  ++DL G
Sbjct: 382 FRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLG 441

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+GKL EA E +E+MPI PD + W AL  AC+ H     A    + L +L+P        
Sbjct: 442 RAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIF 501

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           + + +A  G  +D  K R   ++  +  S G  +IE+   +  F  G +S   +  +   
Sbjct: 502 LDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLK 561

Query: 769 LQNVPENVTARSSHSGL-----CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
           L  +      +  + G       IEEEEKE ++GIHSEKLAL    + ++    TIRI+K
Sbjct: 562 LDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGT-TIRIIK 620

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+R+C  CH   KYVS +   +I L D++  HHFK+G+CSCGDYW
Sbjct: 621 NLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 244/508 (48%), Gaps = 21/508 (4%)

Query: 49  ATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLD 108
           A + A    + +I+L+ AC D+ S+   R +HA +     +   V  +L+S  +     D
Sbjct: 21  ADRQASPDESHFISLIHACKDTASL---RHVHAQILRRGVLSSRVAAQLVSCSSLLKSPD 77

Query: 109 DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACG 168
            +  +F +  ERN +  +A+I   + + R+   V  F LM++ G+ PD   FP +L++  
Sbjct: 78  YSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNS 137

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES----MDEKDGV 224
             G    G+ +H+  +K  + C   VR S++ +Y K G+L  A + FE     + ++  +
Sbjct: 138 KLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
            WN +I+GY +  +   A  LF  M   E   G  +++ LI+ Y   G+ + A ++ + M
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRSM--PERNSG--SWSTLIKGYVDSGELNRAKQLFELM 253

Query: 285 ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
                  +V +WT +I+GF+Q G    A+  + EM   G+ PN  TI + +SAC+   AL
Sbjct: 254 PE----KNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGAL 309

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
             G+ IH   +  G   D  +G +L++MY+KC EL+ A  VF  +  KD+ SW +MI G+
Sbjct: 310 GSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGW 369

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
              G   +A + F +M  S   P+ + +  +++  + +   D  ++ F  M  +  ++  
Sbjct: 370 AVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPT 429

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
              +  ++    + G+ N A  +   M      P+  T  ++  AC       + + +  
Sbjct: 430 LKHYVLVVDLLGRAGKLNEAHELVENMP---INPDLTTWAALYRACKAHKGYRRAESVSQ 486

Query: 525 CVLRRSLESSLPVMNSLID-TYAKSGNI 551
            +L   L+  L      +D T+A  GNI
Sbjct: 487 NLL--ELDPELCGSYIFLDKTHASKGNI 512



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 6/228 (2%)

Query: 6   LTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQ 65
           L   +QL  L+ +K N     T ++     G    AI+    +  +G K    T   +L 
Sbjct: 243 LNRAKQLFELMPEK-NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLS 301

Query: 66  ACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYT 124
           AC  S ++    ++H + L+   ++D  + T L+ +YAKCG LD A  VF +M  +++ +
Sbjct: 302 ACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILS 361

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           W+AMI  ++   R+ + ++ F  M+  G  PD+ +F  +L AC N  + + G L     +
Sbjct: 362 WTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLG-LNFFDSM 420

Query: 185 KLGMSCVRRVRNSVLAVYV--KCGKLIWARRFFESMD-EKDGVAWNSM 229
           +L  +    +++ VL V +  + GKL  A    E+M    D   W ++
Sbjct: 421 RLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 94/191 (49%), Gaps = 17/191 (8%)

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P+    +S++ AC     +  ++ +H  +LRR + SS  V   L+   +   +  YS +I
Sbjct: 27  PDESHFISLIHACK---DTASLRHVHAQILRRGVLSS-RVAAQLVSCSSLLKSPDYSLSI 82

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           F     ++    N+LI G   +  + +++  F  M   G+KP+R TF  ++ ++S  G  
Sbjct: 83  FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142

Query: 618 DLGKKVFCS----ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP--IEPDSS- 670
            LG+ +  +      +C   + +     +++D+Y ++G+L+ A +  E+ P  I+ +S  
Sbjct: 143 WLGRALHAATLKNFVDCDSFVRL-----SLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197

Query: 671 IWEALLTA-CR 680
           IW  L+   CR
Sbjct: 198 IWNVLINGYCR 208



 Score = 42.7 bits (99), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 5/149 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           +GR ++AI     +   G K     ++ +L AC++S+ + L       + L   I+  +K
Sbjct: 372 HGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLK 431

Query: 95  TKLLSV--YAKCGCLDDAREVFEDMR-ERNLYTWSAMIGAYSRDQRWR--EVVELFFLMV 149
             +L V    + G L++A E+ E+M    +L TW+A+  A    + +R  E V    L +
Sbjct: 432 HYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLEL 491

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKL 178
              L        K   + GN  D E  +L
Sbjct: 492 DPELCGSYIFLDKTHASKGNIQDVEKRRL 520


>gi|449467189|ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
           mitochondrial-like [Cucumis sativus]
          Length = 711

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 227/775 (29%), Positives = 366/775 (47%), Gaps = 86/775 (11%)

Query: 9   FQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDS-----IATQGAKVRRNTYINL 63
           F+QL +       P F +     L   G  + A     S       +Q  K+ RN     
Sbjct: 6   FKQLPTFTPLNFKPFFFNFSTQILSKRGNFDSATRQKSSKFLVYCNSQITKLGRN----- 60

Query: 64  LQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLY 123
              CI        ++  +  N +   +    T LL+ YA+   ++ AREVF  + + N+ 
Sbjct: 61  --GCI--------KEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVA 110

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
           +++AMI AY R     E  ELF  M Q     +   +  ++    + G F+  + +H   
Sbjct: 111 SYNAMITAYHRRNMVDEAFELFSSMPQR----NSVSYATMITGFVHAGMFDMAEKLHR-- 164

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
                  V    N ++  Y K G++  A R F+ M EKD V+W+SMISG  ++G+  EA 
Sbjct: 165 ----EKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEAR 220

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD--VFTWTCMIS 301
           +LFDKM                                         PD  V TWT MI 
Sbjct: 221 KLFDKM-----------------------------------------PDRNVVTWTLMID 239

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
           G+ +         LF  M   GV  N  T+T  + AC        G++IH L + +GF  
Sbjct: 240 GYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDV 299

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           D  + NS+I MYS+C  ++AA + FD++  KD+ +WNS+I GY Q+G   KA  LF  M 
Sbjct: 300 DAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMP 359

Query: 422 ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK 481
           + DV    ++W  LI G+   G  DE + LFQ M + D +     +W ++I+G   + + 
Sbjct: 360 QKDV----VSWTTLICGFASEGRIDEFIGLFQMMPEKDAI-----AWTAVISGLVSIEEY 410

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
             A   F KM  S   PN  T+  VL A A +   N+  +IH  V + S+E+ L + NSL
Sbjct: 411 EIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNSL 470

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
           +  Y+K GN+  +  +F  +   +++ +N++I G   +G    AL++F +M+   L PN 
Sbjct: 471 VSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNH 530

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
            TFL ++ A    G+V+ G++ F  +   Y I P  +HY+ M+DL  R+G  +EA+  + 
Sbjct: 531 ITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCRAGMFDEAVSLVS 590

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPED 721
            MP +P   +W A+L A   H  +D+A LA + LF+LEP       ++  +++I G    
Sbjct: 591 SMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVILSNLHSISGDERK 650

Query: 722 ALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS----ESYSDLLYSWLQNV 772
              +R +++    + S G  WI +K+ V+ F  G  S    +  ++++Y+  + V
Sbjct: 651 HELIRLMKKSRGLKKSPGCSWIILKDEVHLFHAGHQSIKNIKEMTEIIYALAEEV 705


>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
          Length = 1241

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 230/823 (27%), Positives = 400/823 (48%), Gaps = 69/823 (8%)

Query: 32   LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
            L   G+ ++A+ +            + T+ +LL+ C   ++++  R +HA  + +  + D
Sbjct: 416  LVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSD 475

Query: 91   VFVKTKLLSVYAKCGCLDDAREVFEDMRER-----NLYTWSAMIGAYSRDQRWREVVELF 145
             ++ T L+++Y KCG L  A +VF+ M E      ++  W+ +I  Y +   + E +  F
Sbjct: 476  PYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQF 535

Query: 146  FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
              M + G+ PD +    +L  C     + AG+ +H  +I+        +  +++ +Y  C
Sbjct: 536  CRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSC 595

Query: 206  GKLIWARRFFESMDEKDG-VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
             + + A   F  ++ +   VAWN MI G+ + G  +++  L+     E  KL   +F   
Sbjct: 596  SRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGA 655

Query: 265  --------IRSYNQLGQCDV-----------------------AMEMVKRMESLGITPDV 293
                    +  + +   CDV                       ++E  K++    +  +V
Sbjct: 656  FTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEV 715

Query: 294  FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
                 MIS F  NGR   AL L+ +M       +  TI+S +S C+ + +   G  +H+ 
Sbjct: 716  ELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAE 775

Query: 354  AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
             +K     +V + ++L+ MY KC   E A+ VF  +K++DV +W SMIAG+CQ      A
Sbjct: 776  VIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDA 835

Query: 414  YELFIKMQ------ESDVPPNVITWNV---------LISGY-IQNGNEDEA------VDL 451
             +LF  M+      +SDV  +VI+  +         LI G+ I+ G E +       VD+
Sbjct: 836  LDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDM 895

Query: 452  FQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
            + + G  +  +        +N  +WNS+I+ Y   G    ++ +  ++    FY + V+I
Sbjct: 896  YSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSI 955

Query: 504  LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
             +VL A + + A  K K +H   +R  + S L V N+LID Y K G + Y++ IF+ M  
Sbjct: 956  TTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPR 1015

Query: 564  KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
            ++++TWNS+I GY  HG    A+ LF +MK     P+  TFL++I + S +GMV+ G  +
Sbjct: 1016 RNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNL 1075

Query: 624  FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
            F  +   Y + P +EHY++++DL GR+G+L++A  FI  MPI+ D S+W  LL ACR H 
Sbjct: 1076 FQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHR 1135

Query: 684  NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
            N++L  L  + L  +EP        +L +Y      + A  +R   +    + S G  WI
Sbjct: 1136 NMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWI 1195

Query: 744  EVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS-SHSGL 785
            EVKN V  F +G  S +    +Y  L ++  N+  +  S+ G+
Sbjct: 1196 EVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKGCSYEGI 1238



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 176/684 (25%), Positives = 298/684 (43%), Gaps = 98/684 (14%)

Query: 129  IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM 188
            I A  +  ++ + +EL        L    F FP +L+ C +  +   G+ +H+ ++ +G+
Sbjct: 413  IKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGL 472

Query: 189  SCVRRVRNSVLAVYVKCGKLIWARRFFESMDE-----KDGVAWNSMISGYFQIGENDEAH 243
                 +  S++ +YVKCG L  A + F+ M E      D   WN +I GYF+ G  +E  
Sbjct: 473  QSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGL 532

Query: 244  RLFDKMCREEIKLGVVTFNILIRSYNQL-------------------------------- 271
              F +M    I+    + +I++   N+L                                
Sbjct: 533  AQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMY 592

Query: 272  GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
              C   ME       L    ++  W  MI GF +NG   ++L+L+             + 
Sbjct: 593  SSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASF 652

Query: 332  TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
            T A +AC+  + L  G ++H   +KM F DD  V  SL+ MY+K   +E A++VFD + D
Sbjct: 653  TGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLD 712

Query: 392  KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG------------- 438
            K+V   N+MI+ +   G    A  L+ KM+  + P +  T + L+SG             
Sbjct: 713  KEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTV 772

Query: 439  ----------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
                                  Y + G+ ++A  +F  M + D V     +W S+IAG+ 
Sbjct: 773  HAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKERDVV-----AWGSMIAGFC 827

Query: 477  QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
            Q  +  +AL +FR M+      +   + SV+ A   L        IHG  ++R LES + 
Sbjct: 828  QNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVF 887

Query: 537  VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
            V  SL+D Y+K G    +  +F  M +K+++ WNS+I  Y  +G    +++L  Q+   G
Sbjct: 888  VACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHG 947

Query: 597  LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI---IPM-IEHYSAMIDLYGRSGK 652
               +  +  ++++A S    +  GK +       YQI   IP  ++  +A+ID+Y + G 
Sbjct: 948  FYLDSVSITTVLVAVSSVAALLKGKTL-----HAYQIRLQIPSDLQVENALIDMYVKCGC 1002

Query: 653  LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF------DLEPGDVLIQ 706
            L+ A    E+MP   +   W +++     HGN + AV    RLF      +  P +V   
Sbjct: 1003 LKYAQLIFENMP-RRNLVTWNSMIAGYGSHGNCEEAV----RLFKEMKRSETAPDEVTFL 1057

Query: 707  RLILQIYAICGKPEDALKVRKLER 730
             LI    +  G  E+ L + +L R
Sbjct: 1058 ALITSC-SHSGMVEEGLNLFQLMR 1080


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 208/674 (30%), Positives = 345/674 (51%), Gaps = 46/674 (6%)

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
           G +D+  ++   + +    L ++T N LI  Y +  +  +A ++   M       +V +W
Sbjct: 20  GLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE----RNVVSW 75

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           + ++SG   NG    +L LF EM   G+ PN  T ++ + AC  L AL  G++IH   +K
Sbjct: 76  SALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLK 135

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
           +GF   V VGNSL++MYSKC  +  AE+VF  I D+ + SWN+MIAG+  AGY  KA + 
Sbjct: 136 IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDT 195

Query: 417 FIKMQESDVP--PNVITWNVLI-----SGYIQNGNEDEA-------------------VD 450
           F  MQE+++   P+  T   L+     +G I  G +                      VD
Sbjct: 196 FGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVD 255

Query: 451 LFQRMG-------KNDKVKRNTA-SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           L+ + G         D++K  T  SW+SLI GY Q G+   A+G+F+++Q      +   
Sbjct: 256 LYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFA 315

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
           + S++   A      + K++    ++        V+NS++D Y K G +  +   F  M 
Sbjct: 316 LSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQ 375

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            KD+I+W  +I GY  HG    ++ +F +M    ++P+   +L+++ A S +GM+  G++
Sbjct: 376 LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEE 435

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
           +F  + E + I P +EHY+ ++DL GR+G+L+EA   I+ MPI+P+  IW+ LL+ CR+H
Sbjct: 436 LFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVH 495

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
           G+I+L     + L  ++  +     ++  +Y   G   +    R+L      +   G  W
Sbjct: 496 GDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSW 555

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSS------HSGLCIEEEEKEEIS 796
           +E++  V+ F +G  S   + ++   L+     +           H    I++E KEE  
Sbjct: 556 VEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENL 615

Query: 797 GIHSEKLALAFALI--GSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCL 854
             HSEKLA+  AL   G +Q   TIR+ KN+R+CV CHE  K +S +      + D+   
Sbjct: 616 RAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRF 675

Query: 855 HHFKNGQCSCGDYW 868
           H F++G CSCGDYW
Sbjct: 676 HSFEDGCCSCGDYW 689



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 209/443 (47%), Gaps = 36/443 (8%)

Query: 56  RRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVF 114
           +R   +++L+ C          ++H +L    + +++     L+ +Y KC     A +VF
Sbjct: 5   QRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVF 64

Query: 115 EDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE 174
           + M ERN+ +WSA++  +  +   +  + LF  M + G++P++F F   L+ACG     E
Sbjct: 65  DSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALE 124

Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
            G  +H   +K+G   +  V NS++ +Y KCG++  A + F  + ++  ++WN+MI+G+ 
Sbjct: 125 KGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFV 184

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNI--LIRSYNQLG-----------------QCD 275
             G   +A   F  M    IK     F +  L+++ +  G                  C 
Sbjct: 185 HAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 244

Query: 276 VAMEMVKRMESLGIT----------------PDVFTWTCMISGFAQNGRTSQALDLFKEM 319
            +  +   +  L +                   + +W+ +I G+AQ G   +A+ LFK +
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
             +    +   ++S I    D   L  G ++ +LAVK+    +  V NS+++MY KC  +
Sbjct: 305 QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLV 364

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
           + AE+ F  ++ KDV SW  +I GY + G   K+  +F +M   ++ P+ + +  ++S  
Sbjct: 365 DEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSAC 424

Query: 440 IQNGNEDEAVDLFQRMGKNDKVK 462
             +G   E  +LF ++ +   +K
Sbjct: 425 SHSGMIKEGEELFSKLLETHGIK 447



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 197/412 (47%), Gaps = 50/412 (12%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG L  ++++   +  QG      T+   L+AC   N++    ++H F L +  E+ V V
Sbjct: 85  NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y+KCG +++A +VF  + +R+L +W+AMI  +       + ++ F +M +  +
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204

Query: 154 --FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR--VRNSVLAVYVKCGKLI 209
              PD+F    +L+AC + G   AGK +H  +++ G  C     +  S++ +YVKCG L 
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 264

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------- 261
            AR+ F+ + EK  ++W+S+I GY Q GE  EA  LF ++  +E+   + +F        
Sbjct: 265 SARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL--QELNSQIDSFALSSIIGV 322

Query: 262 -----------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
                                        N ++  Y + G  D A +    M+      D
Sbjct: 323 FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQ----LKD 378

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           V +WT +I+G+ ++G   +++ +F EM    + P+ V   + +SAC+    +  G E+ S
Sbjct: 379 VISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFS 438

Query: 353 -LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIA 402
            L    G    V     ++++  +   L+ A+ + D +  K +V  W ++++
Sbjct: 439 KLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 189/435 (43%), Gaps = 78/435 (17%)

Query: 324 VMPNG-VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           ++PN    + S +  CT       G ++H   +K G   +++  N LI+MY KC E   A
Sbjct: 1   MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---------- 432
            +VFD + +++V SW+++++G+   G    +  LF +M    + PN  T+          
Sbjct: 61  YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120

Query: 433 -------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTAS 467
                                    N L+  Y + G  +EA  +F+R+     V R+  S
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-----VDRSLIS 175

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCF--YPNCVTILSVLPACAYLVASNKVKEIHGC 525
           WN++IAG+   G  + AL  F  MQ +     P+  T+ S+L AC+        K+IHG 
Sbjct: 176 WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 235

Query: 526 VLRRSLE--SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
           ++R      SS  +  SL+D Y K G +  +R  FD +  K +I+W+SLI GY   G + 
Sbjct: 236 LVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFV 295

Query: 584 AALDLF-------DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK--------VFCSIT 628
            A+ LF        Q+ SF L    G F    L      M  L  K        V  S+ 
Sbjct: 296 EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVV 355

Query: 629 ECYQIIPMIEH---------------YSAMIDLYGRSGKLEEAMEFIEDM---PIEPDSS 670
           + Y    +++                ++ +I  YG+ G  ++++    +M    IEPD  
Sbjct: 356 DMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEV 415

Query: 671 IWEALLTACRIHGNI 685
            + A+L+AC   G I
Sbjct: 416 CYLAVLSACSHSGMI 430



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 147/303 (48%), Gaps = 7/303 (2%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           T  +LL+AC  +  I+  +++H FL            +   L+ +Y KCG L  AR+ F+
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 271

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            ++E+ + +WS++I  Y+++  + E + LF  + +     D F    I+    +      
Sbjct: 272 QIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQ 331

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           GK M +L +KL       V NSV+ +Y+KCG +  A + F  M  KD ++W  +I+GY +
Sbjct: 332 GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMV-KRMESLGITPDVF 294
            G   ++ R+F +M R  I+   V +  ++ + +  G      E+  K +E+ GI P V 
Sbjct: 392 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 451

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
            + C++    + GR  +A  L   M    + PN     + +S C     + +G E+  + 
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMP---IKPNVGIWQTLLSLCRVHGDIELGKEVGKIL 508

Query: 355 VKM 357
           +++
Sbjct: 509 LRI 511


>gi|225428117|ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Vitis vinifera]
          Length = 681

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 209/676 (30%), Positives = 357/676 (52%), Gaps = 58/676 (8%)

Query: 79  LHAFLNLVTE------IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY 132
           LH F++ + +      +D++   K +S   + G +++AR +F+ M +RN+ TW++MI  Y
Sbjct: 49  LHCFVSTLQQPKNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGY 108

Query: 133 SRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR 192
            R +   +  +LF  M    +   + +    +   G     E G+ +   + +    CV 
Sbjct: 109 VRRREMAKARKLFDEMPDRDVVSWNLMISGYVSCQGRW--VEEGRHLFDEMPE--RDCVS 164

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
              N++++ Y + G++  A + F+SM E++ V+WN+M++G+ Q G+ + A   F +M   
Sbjct: 165 W--NTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPER 222

Query: 253 EIKLGVVTFNILIRSYNQLGQCDVAME--MVKRMESLGITPDVFTWTCMISGFAQNGRTS 310
           +      + + L+    Q G+ D A    +  R +       V  +  +++G+ QNGR  
Sbjct: 223 D----SASLSALVAGLIQNGELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGRVD 278

Query: 311 QALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL 369
           +A  LF ++ F  G   +G                              F  +V+  NS+
Sbjct: 279 KARQLFDQIPFYDGGQKDGGR----------------------------FERNVVSWNSM 310

Query: 370 INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           I  Y K  ++ +A  +FD +K++D  SWN+MI+GY +     +A+ LF +M      P+ 
Sbjct: 311 IMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPN----PDT 366

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
           +TWN +ISG+ Q GN + A  LF  + +     +N  SWNS+IAGY+  G    A  ++R
Sbjct: 367 LTWNSMISGFAQKGNLELARALFATIPQ-----KNLVSWNSMIAGYENNGDYKGATELYR 421

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           +M      P+  T+ SVL  C+   A +   +IH  + + ++   +P+ NSLI  Y++ G
Sbjct: 422 QMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITK-TVIPDIPINNSLITMYSRCG 480

Query: 550 NIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
            IV +RTIFD +   K++I+WN++I GY  HGF   AL+LF+ MK   ++P   TF+S++
Sbjct: 481 AIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVL 540

Query: 609 LAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
            A + AG V  G+  F S+   + I P IEH+++++D+ GR G+LEEAM+ I  MP EPD
Sbjct: 541 NACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPD 600

Query: 669 SSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKL 728
            ++W ALL ACR+H N++LA +A E L  LEP       L+  +YA  G+ ++A ++R +
Sbjct: 601 KAVWGALLGACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMM 660

Query: 729 ERENTRRNSFGQCWIE 744
              N  R   G  W++
Sbjct: 661 MERNNIRKQPGYSWVD 676



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 162/626 (25%), Positives = 269/626 (42%), Gaps = 111/626 (17%)

Query: 6   LTTFQQL-HSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRN--TYIN 62
           ++T QQ  +S+      P  R +HL     NGR+NEA  + D++       +RN  T+ +
Sbjct: 53  VSTLQQPKNSVSLDLYTPNKRISHL---IRNGRINEARALFDAMP------QRNIVTWNS 103

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGC--LDDAREVFEDMRER 120
           ++   +    +  ARKL    + + + DV     ++S Y  C    +++ R +F++M ER
Sbjct: 104 MITGYVRRREMAKARKL---FDEMPDRDVVSWNLMISGYVSCQGRWVEEGRHLFDEMPER 160

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG---- 176
           +  +W+ MI  Y+R  R  E ++LF  M +  +   + +    LQ     GD E      
Sbjct: 161 DCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQN----GDVERAIEFF 216

Query: 177 ------------KLMHSLVIKLGMSCVRRV-----------------RNSVLAVYVKCGK 207
                        L+  L+    +   +R+                  N +LA Y + G+
Sbjct: 217 MRMPERDSASLSALVAGLIQNGELDEAKRILLTSRRQDDDKGDLVHAYNILLAGYGQNGR 276

Query: 208 LIWARRFFESMD-----EKDG-------VAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           +  AR+ F+ +      +KDG       V+WNSMI  Y +  +   A  LFD+M   +  
Sbjct: 277 VDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERD-- 334

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ---------- 305
              +++N +I  Y ++   + A  + + M +    PD  TW  MISGFAQ          
Sbjct: 335 --TISWNTMISGYVRMSDMEEAWMLFQEMPN----PDTLTWNSMISGFAQKGNLELARAL 388

Query: 306 ---------------------NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
                                NG    A +L+++M   G  P+  T++S +S C+   AL
Sbjct: 389 FATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAAL 448

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAG 403
            +GM+IH    K     D+ + NSLI MYS+C  +  A  +FD +K  K+V SWN+MI G
Sbjct: 449 HLGMQIHQQITKT-VIPDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGG 507

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
           Y   G+   A ELF  M+   V P  IT+  +++     G   E    F+ M     ++ 
Sbjct: 508 YAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGFVKEGRMHFKSMACEFGIEP 567

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
               + SL+    + GQ   A+ +   M    F P+     ++L AC         +   
Sbjct: 568 RIEHFASLVDIVGRHGQLEEAMDLINSMP---FEPDKAVWGALLGACRVHNNVELARVAA 624

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSG 549
             +++   ESS P +  L + YA  G
Sbjct: 625 EALMKLEPESSAPYV-LLHNMYADVG 649



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 123/258 (47%), Gaps = 4/258 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           NG    A  +   +  QG K  R+T  ++L  C    ++HL  ++H  +      D+ + 
Sbjct: 410 NGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDIPIN 469

Query: 95  TKLLSVYAKCGCLDDAREVFEDMR-ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
             L+++Y++CG + +AR +F++++ ++ + +W+AMIG Y+      + +ELF LM +  +
Sbjct: 470 NSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKV 529

Query: 154 FPDDFLFPKILQACGNCGDFEAGKL-MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            P    F  +L AC + G  + G++   S+  + G+        S++ +  + G+L  A 
Sbjct: 530 RPTYITFISVLNACAHAGFVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAM 589

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
               SM  E D   W +++ G  ++  N E  R+  +   +        + +L   Y  +
Sbjct: 590 DLINSMPFEPDKAVWGALL-GACRVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADV 648

Query: 272 GQCDVAMEMVKRMESLGI 289
           GQ D A EM   ME   I
Sbjct: 649 GQWDNATEMRMMMERNNI 666


>gi|302763107|ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
 gi|300167208|gb|EFJ33813.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
          Length = 703

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 210/699 (30%), Positives = 354/699 (50%), Gaps = 82/699 (11%)

Query: 76  ARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY 132
            R++HA +    L +  D F+   LL +Y KCG +DDA +VF  +  R+L++W+ +I A+
Sbjct: 5   GRRIHAHIVASGLAS--DGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIAAF 62

Query: 133 SRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR 192
           ++++  R+ +E+F  M   G+ PD      +L AC +  D E GK +HS  +  G+S   
Sbjct: 63  AKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSI 122

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
            V+N+++++Y +C +L  AR  F+ ++ K  V+WN+MI+   + GE ++A +LF +M   
Sbjct: 123 IVQNALVSMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM--- 179

Query: 253 EIKLGVVTFN------ILIRSYNQLGQ-----------------CDVAMEMVKRMESLGI 289
           E++   VTF        L+  + ++G+                     + M  +   +G+
Sbjct: 180 ELEPNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGM 239

Query: 290 TPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
              VF         +W  M+  + QN    +AL+++ EM    V  + VT+  A+     
Sbjct: 240 ARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISAS 299

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
           L+ L +G+E+H L+V  G+  ++ V N+LI+MY KC EL+AA RVF  ++  DV SW ++
Sbjct: 300 LRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTAL 359

Query: 401 IAGYCQAGYCGKAYELFIKMQESDVPPNVITWN--------------------------- 433
           I  Y Q G   +A EL+ +M+   + P+ +T+                            
Sbjct: 360 IVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKD 419

Query: 434 ---------VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
                     LI+ Y++ G  D + ++FQ      K  +    WN++I  Y+Q G    A
Sbjct: 420 GFSDGVLVAALINMYVKCGRLDLSSEIFQSC----KDTKAVVVWNAMITAYEQEGYSRAA 475

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH-GCVLRRSLESSLPVMNSLID 543
           + ++  M+     P+  T+ S+L ACA L    K +++H   +  R    +  V+N+LI 
Sbjct: 476 VDLYDMMKQRGLDPDESTLSSILSACAELQDLEKGEQLHVEIIASRDCSQNPVVLNALIS 535

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGT 603
            YA  G I  ++ +F  M ++D+++W  LI  YV  G    AL L+ +M   G++P   T
Sbjct: 536 MYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEPT 595

Query: 604 FLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
           FL + LA   AG+VD  K  F S+ E  +I P  +HYS ++ +  R+GKLEEA + +  M
Sbjct: 596 FLCVFLACGHAGLVDECKWYFQSMIE-DRITPTFDHYSCVVTVLSRAGKLEEAEDLLHSM 654

Query: 664 PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           P  P S  W +LL ACR HG++  A  A +   +L+  D
Sbjct: 655 PFNPGSVGWTSLLGACRTHGDLKRARRAADEAMELDRQD 693



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 168/618 (27%), Positives = 279/618 (45%), Gaps = 90/618 (14%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL 98
           +AI +  S+ + G K    T  ++L AC     +   +K+H+  L       + V+  L+
Sbjct: 70  KAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSIIVQNALV 129

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
           S+YA+C  LD AR VF+ +  +++ +W+AMI A +R     + ++LF  M    L P++ 
Sbjct: 130 SMYARCSRLDVARVVFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRM---ELEPNEV 186

Query: 159 LFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
            F  +  AC    D  E GK +H  +    +     V  +++ +Y K GK+  AR+ F  
Sbjct: 187 TFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQVFNG 246

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------------- 261
           +  K+ V+WN+M+  Y Q   + EA  ++ +M  ++++   VT                 
Sbjct: 247 IQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISASLRLLKLG 306

Query: 262 -------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
                              N LI  Y +  + D A  +  ++ +     DV +WT +I  
Sbjct: 307 IELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRA----HDVVSWTALIVA 362

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS--LAVKMGFT 360
           + Q+GR  +AL+L+K+M   G+ P+ VT TS +SAC++   L +G  +H+  LA K GF+
Sbjct: 363 YTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHARLLARKDGFS 422

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKD-KDVYSWNSMIAGYCQAGYCGKAYELFIK 419
           D VLV  +LINMY KC  L+ +  +F   KD K V  WN+MI  Y Q GY   A +L+  
Sbjct: 423 DGVLVA-ALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDM 481

Query: 420 MQESDVPP------------------------------------NVITWNVLISGYIQNG 443
           M++  + P                                    N +  N LIS Y   G
Sbjct: 482 MKQRGLDPDESTLSSILSACAELQDLEKGEQLHVEIIASRDCSQNPVVLNALISMYASCG 541

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
              EA  +F+RM KN    R+  SW  LI+ Y Q G    AL ++R+M      P   T 
Sbjct: 542 EIREAKAVFKRM-KN----RDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEPTF 596

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS- 562
           L V  AC +    ++ K     ++   +  +    + ++   +++G +  +  +   M  
Sbjct: 597 LCVFLACGHAGLVDECKWYFQSMIEDRITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPF 656

Query: 563 SKDIITWNSLICGYVLHG 580
           +   + W SL+     HG
Sbjct: 657 NPGSVGWTSLLGACRTHG 674



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 106/453 (23%), Positives = 205/453 (45%), Gaps = 91/453 (20%)

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           AL  G  IH+  V  G   D  +G+ L+ MY KC  ++ A +VF  +  + ++SWN +IA
Sbjct: 1   ALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNFIIA 60

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPN---------------------------------- 428
            + +  +  KA E+F  M  + + P+                                  
Sbjct: 61  AFAKNRHGRKAIEMFRSMDSAGIKPDSATLSSVLGACSSLRDLEEGKKIHSRALARGLSS 120

Query: 429 -VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK-RNTASWNSLIAGYQQLGQKNNALG 486
            +I  N L+S Y +    D A  +F      DK++ ++  SWN++IA   + G+   AL 
Sbjct: 121 SIIVQNALVSMYARCSRLDVARVVF------DKIESKSVVSWNAMIAACARQGEAEQALQ 174

Query: 487 VFRKMQSSCFYPNCVTILSVLPACAYLVASNKV-KEIHGCVLRRSLESSLPVMNSLIDTY 545
           +F++M+     PN VT  SV  AC+ L    +V K IH  +    LE+++ V  +++  Y
Sbjct: 175 LFKRME---LEPNEVTFASVFNACSLLPDHREVGKRIHDRIRGSHLEANVTVATAIVTMY 231

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
            K G +  +R +F+G+  K++++WN+++  Y  +     AL+++ +M +  ++ +  T +
Sbjct: 232 GKFGKVGMARQVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVV 291

Query: 606 -----------------------------SIILAHSLAGM------VDLGKKVFCSITEC 630
                                        +I + ++L  M      +D  ++VF  +   
Sbjct: 292 IALGISASLRLLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKV-RA 350

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP---IEPDSSIWEALLTACRIHGNIDL 687
           + ++     ++A+I  Y + G+  EA+E  + M    +EPD   + ++L+AC    +++L
Sbjct: 351 HDVVS----WTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLEL 406

Query: 688 AVLAIERLFDLEPG--DVLIQRLILQIYAICGK 718
                 RL   + G  D ++   ++ +Y  CG+
Sbjct: 407 GQALHARLLARKDGFSDGVLVAALINMYVKCGR 439



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 163/318 (51%), Gaps = 16/318 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF-- 92
           +GR  EA+ +   +  +G +  + T+ ++L AC +++ + L + LHA   L+   D F  
Sbjct: 366 HGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTSDLELGQALHA--RLLARKDGFSD 423

Query: 93  --VKTKLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
             +   L+++Y KCG LD + E+F+  ++ + +  W+AMI AY ++   R  V+L+ +M 
Sbjct: 424 GVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAMITAYEQEGYSRAAVDLYDMMK 483

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR--VRNSVLAVYVKCGK 207
           Q GL PD+     IL AC    D E G+ +H  +I     C +   V N+++++Y  CG+
Sbjct: 484 QRGLDPDESTLSSILSACAELQDLEKGEQLHVEIIA-SRDCSQNPVVLNALISMYASCGE 542

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           +  A+  F+ M  +D V+W  +IS Y Q G+   A RL+ +M  E ++    TF  +  +
Sbjct: 543 IREAKAVFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEPTFLCVFLA 602

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
               G  D      + M    ITP    ++C+++  ++ G+  +A DL   M F    P 
Sbjct: 603 CGHAGLVDECKWYFQSMIEDRITPTFDHYSCVVTVLSRAGKLEEAEDLLHSMPF---NPG 659

Query: 328 GVTITSAISACT---DLK 342
            V  TS + AC    DLK
Sbjct: 660 SVGWTSLLGACRTHGDLK 677


>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 195/590 (33%), Positives = 318/590 (53%), Gaps = 31/590 (5%)

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           +F    +I G++  G   +A+ L+  M  +GV PN  T    +S CT + A   G+++H 
Sbjct: 96  LFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHG 155

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
             VKMG  +DV + N LI+ Y++C  ++   +VF+ + +++V SW S+I GY +     +
Sbjct: 156 SVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKE 215

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
           A  LF +M       N +  N L+  Y++ G  D A  LF     ++ V RN   +N+++
Sbjct: 216 AVSLFFEML------NKVMVNALVDMYMKCGAIDAAKRLF-----DECVDRNLVLYNTIL 264

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC-----VL 527
           + Y + G    AL +  +M      P+ VT+LS + A A LV     K  HG      + 
Sbjct: 265 SNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIE 324

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           +  +   + +  +L+D +A+ G+   +  +F+ M+ +D+  W + I    + G    A  
Sbjct: 325 KNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATG 384

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           LF+QM   G+KP+   F+ ++ A S  G V+ G  +F S+ E + I P IEHY  M+DL 
Sbjct: 385 LFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIF-SLMEDHGISPQIEHYGCMVDLL 443

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           GR+G L EA + I+ MP+EP+  +W +LL ACR+H N+++A  A ER+ +L P    +  
Sbjct: 444 GRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHV 503

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
           L+  IYA  GK  D  +VR   RE   R   G   ++V  +++ F +G   ES+ ++ + 
Sbjct: 504 LLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSG--DESHPEMTHI 561

Query: 768 WLQNVPENVTARSSHSG---------LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
            L  + + +  R S +G         L ++E+EKE +   HSEKLA+AF LI + ++   
Sbjct: 562 AL--MLQEMNCRFSDAGHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRS-MP 618

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IR+VKN+RMC  CH  AK  S++++ EI + D+   H F+ G CSC DYW
Sbjct: 619 IRVVKNLRMCSDCHSFAKMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 668



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 205/429 (47%), Gaps = 27/429 (6%)

Query: 95  TKLLSVYAKCGC---LDDAREVFE----DMRERN-LYTWSAMIGAYSRDQRWREVVELFF 146
           TKL++  A+      LD AR+ FE    D+R  + L+  +++I  YS     RE + L+ 
Sbjct: 61  TKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYV 120

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M+  G+ P+ + FP +L  C     F  G  +H  V+K+G+     ++N ++  Y +CG
Sbjct: 121 RMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECG 180

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            +    + FE M E++ V+W S+I GY +     EA  LF +M      L  V  N L+ 
Sbjct: 181 HMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEM------LNKVMVNALVD 234

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            Y + G  D A    KR+    +  ++  +  ++S +A+ G   +AL +  EM   G  P
Sbjct: 235 MYMKCGAIDAA----KRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRP 290

Query: 327 NGVTITSAISACTDLKAL-----AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
           + VT+ SAISA   L  L       G  +H+   K G   D+ +  +L++M+++C + ++
Sbjct: 291 DRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQS 350

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
           A +VF+ + ++DV +W + I      G    A  LF +M    V P+V+ +  +++    
Sbjct: 351 AMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSH 410

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G  ++ + +F  M ++  +      +  ++    + G    A  + + M      PN V
Sbjct: 411 GGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMP---MEPNDV 466

Query: 502 TILSVLPAC 510
              S+L AC
Sbjct: 467 VWGSLLAAC 475



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 96/415 (23%), Positives = 166/415 (40%), Gaps = 95/415 (22%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVF 92
           G GR  EAI +   +   G      T+  +L  C    +     ++H + + +  E DVF
Sbjct: 110 GLGR--EAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVF 167

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           ++  L+  YA+CG +D   +VFE M ERN+ +W+++I  Y+R  R +E V LFF M+   
Sbjct: 168 IQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMLN-- 225

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
                                                  + + N+++ +Y+KCG +  A+
Sbjct: 226 ---------------------------------------KVMVNALVDMYMKCGAIDAAK 246

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL- 271
           R F+   +++ V +N+++S Y + G   EA  + D+M ++  +   VT    I +  QL 
Sbjct: 247 RLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLV 306

Query: 272 ---------------------------------------GQCDVAMEMVKRMESLGITPD 292
                                                  G    AM++  +M       D
Sbjct: 307 DLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTE----RD 362

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           V  WT  I   A  G    A  LF +M   GV P+ V     ++AC+    +  G+ I S
Sbjct: 363 VSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFS 422

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK----DKDVYSWNSMIAG 403
           L    G +  +     ++++  +   L  A   FD+IK    + +   W S++A 
Sbjct: 423 LMEDHGISPQIEHYGCMVDLLGRAGLLREA---FDLIKSMPMEPNDVVWGSLLAA 474


>gi|449530420|ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
           mitochondrial-like, partial [Cucumis sativus]
          Length = 719

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 211/684 (30%), Positives = 339/684 (49%), Gaps = 66/684 (9%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T LL+ YA+   ++ AREVF  + + N+ +++AMI AY R     E  ELF  M Q    
Sbjct: 90  TALLTAYAENSEINKAREVFNKIPDPNVASYNAMITAYHRRNMVDEAFELFSSMPQR--- 146

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            +   +  ++    + G F+  + +H          V    N ++  Y K G++  A R 
Sbjct: 147 -NSVSYATMITGFVHAGMFDMAEKLHR------EKPVIVSSNVLINGYSKVGRVEDAVRI 199

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F+ M EKD V+W+SMISG  ++G+  EA +LFDKM                         
Sbjct: 200 FDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKM------------------------- 234

Query: 275 DVAMEMVKRMESLGITPD--VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
                           PD  V TWT MI G+ +         LF  M   GV  N  T+T
Sbjct: 235 ----------------PDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLT 278

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
             + AC        G++IH L + +GF  D  + NS+I MYS+C  ++AA + FD++  K
Sbjct: 279 VLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKK 338

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLF 452
           D+ +WNS+I GY Q+G   KA  LF  M + DV    ++W  LI G+   G  DE + LF
Sbjct: 339 DIVTWNSLITGYVQSGNLEKAVFLFENMPQKDV----VSWTTLICGFASEGRIDEFIGLF 394

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
           Q M + D +     +W ++I+G   + +   A   F KM  S   PN  T+  VL A A 
Sbjct: 395 QMMPEKDAI-----AWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGAS 449

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 572
           +   N+  +IH  V + S+E+ L + NSL+  Y+K GN+  +  +F  +   +++ +N++
Sbjct: 450 MAILNQGLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTI 509

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQ 632
           I G   +G    AL++F +M+   L PN  TFL ++ A    G+V+ G++ F  +   Y 
Sbjct: 510 ITGLAQNGLGKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYD 569

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAI 692
           I P  +HY+ M+DL  R+G  +EA+  +  MP +P   +W A+L A   H  +D+A LA 
Sbjct: 570 IQPEPDHYACMVDLLCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAA 629

Query: 693 ERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTF 752
           + LF+LEP       ++  +++I G       +R +++    + S G  WI +K+ V+ F
Sbjct: 630 QNLFELEPNSATPYVILSNLHSISGDERKHELIRLMKKSRGLKKSPGCSWIILKDEVHLF 689

Query: 753 VTGGWS----ESYSDLLYSWLQNV 772
             G  S    +  ++++Y+  + V
Sbjct: 690 HAGHQSIKNIKEMTEIIYALAEEV 713



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 197/370 (53%), Gaps = 8/370 (2%)

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           + E DV   + ++S   + G + +AR++F+ M +RN+ TW+ MI  Y +    ++   LF
Sbjct: 203 MAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILF 262

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M ++G+  +      +L+ACG+   +  G  +H LV+ LG      + NS++ +Y +C
Sbjct: 263 LNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRC 322

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
             +  A + F+ M +KD V WNS+I+GY Q G  ++A  LF+ M +++    VV++  LI
Sbjct: 323 YSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQKD----VVSWTTLI 378

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             +   G+ D  + + + M       D   WT +ISG         A   F +M    + 
Sbjct: 379 CGFASEGRIDEFIGLFQMMPE----KDAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIK 434

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           PN  T++  +SA   +  L  G++IH++  KM   +D+ + NSL++MYSKC  ++ A ++
Sbjct: 435 PNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKM 494

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
           F  IK  +V ++N++I G  Q G   +A E+F KMQ+  + PN IT+  ++S  +  G  
Sbjct: 495 FYYIKVPNVVAYNTIITGLAQNGLGKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLV 554

Query: 446 DEAVDLFQRM 455
           +E    F  M
Sbjct: 555 EEGRRYFDLM 564



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 134/537 (24%), Positives = 226/537 (42%), Gaps = 108/537 (20%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           NS +    + G +  A   F  M  K+ V+W ++++ Y +  E ++A  +F+K+      
Sbjct: 59  NSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDP--- 115

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             V ++N +I +Y++    D A E+   M       +  ++  MI+GF   G    A  L
Sbjct: 116 -NVASYNAMITAYHRRNMVDEAFELFSSMPQ----RNSVSYATMITGFVHAGMFDMAEKL 170

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
            +E                                            ++  N LIN YSK
Sbjct: 171 HREKPV-----------------------------------------IVSSNVLINGYSK 189

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
              +E A R+FD + +KDV SW+SMI+G C+ G   +A +LF KM +     NV+TW ++
Sbjct: 190 VGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEARKLFDKMPDR----NVVTWTLM 245

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           I GY++                           N L  G+           +F  M+   
Sbjct: 246 IDGYMK--------------------------MNFLKDGFI----------LFLNMRREG 269

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
              N  T+  +L AC       +  +IHG VL    +    + NS+I  Y++  +I  + 
Sbjct: 270 VEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAA 329

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
             FD M  KDI+TWNSLI GYV  G    A+ LF+ M     + +  ++ ++I   +  G
Sbjct: 330 KQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMP----QKDVVSWTTLICGFASEG 385

Query: 616 MVDLGKKVFCSITECYQIIPMIE--HYSAMIDLYGRSGKLEEAMEFIEDM---PIEPDSS 670
            +D            +Q++P  +   ++A+I       + E A  +   M    I+P++ 
Sbjct: 386 RID-------EFIGLFQMMPEKDAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAF 438

Query: 671 IWEALLTACRIHG--NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
               +L+A       N  L + AI     +E  D+ IQ  ++ +Y+ CG  +DALK+
Sbjct: 439 TLSCVLSAGASMAILNQGLQIHAIVTKMSME-NDLSIQNSLVSMYSKCGNVDDALKM 494



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 125/264 (47%), Gaps = 4/264 (1%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           T+ +L+   + S   +L + +  F N+  + DV   T L+  +A  G +D+   +F+ M 
Sbjct: 342 TWNSLITGYVQSG--NLEKAVFLFENM-PQKDVVSWTTLICGFASEGRIDEFIGLFQMMP 398

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           E++   W+A+I      + +      F  M+Q  + P+ F    +L A  +      G  
Sbjct: 399 EKDAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQ 458

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H++V K+ M     ++NS++++Y KCG +  A + F  +   + VA+N++I+G  Q G 
Sbjct: 459 IHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGL 518

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWT 297
             EA  +F KM  + +    +TF  ++ +   +G  +        M SL  I P+   + 
Sbjct: 519 GKEALEIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYA 578

Query: 298 CMISGFAQNGRTSQALDLFKEMSF 321
           CM+    + G   +A+ L   M F
Sbjct: 579 CMVDLLCRAGMFDEAVSLVSSMPF 602



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 101/500 (20%), Positives = 202/500 (40%), Gaps = 76/500 (15%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTK 96
           L +   +  ++  +G +V   T   LL+AC   +      ++H   L+L  ++D ++   
Sbjct: 255 LKDGFILFLNMRREGVEVNATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANS 314

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           ++++Y++C  +D A + F+ M ++++ TW+++I  Y +     + V LF  M Q  +   
Sbjct: 315 IITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVVSW 374

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
             L          CG    G++   +                                F+
Sbjct: 375 TTLI---------CGFASEGRIDEFI------------------------------GLFQ 395

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            M EKD +AW ++ISG   I E + A   F KM +  IK    T + ++ +   +   + 
Sbjct: 396 MMPEKDAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQ 455

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
            +++   +  + +  D+     ++S +++ G    AL +F  +     +PN V   + I 
Sbjct: 456 GLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIK----VPNVVAYNTII- 510

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGN--SLINMYSKCEE---LEAAERVFDMIK- 390
             T L    +G E   +  KM   DD LV N  + + + S C     +E   R FD+++ 
Sbjct: 511 --TGLAQNGLGKEALEIFTKM--QDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRS 566

Query: 391 ------DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
                 + D Y+   M+   C+AG   +A  L   M      P+   W  ++     +  
Sbjct: 567 LYDIQPEPDHYA--CMVDLLCRAGMFDEAVSLVSSMP---FDPHQGVWGAVLGASWTHLR 621

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            D A    Q +    +++ N+A+   +++    +        + R M+ S         L
Sbjct: 622 LDVAELAAQNLF---ELEPNSATPYVILSNLHSISGDERKHELIRLMKKS-------RGL 671

Query: 505 SVLPACAYLVASNKVKEIHG 524
              P C++++  ++V   H 
Sbjct: 672 KKSPGCSWIILKDEVHLFHA 691


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 208/764 (27%), Positives = 371/764 (48%), Gaps = 69/764 (9%)

Query: 173 FEAGKLMHSLVIKLGMSCVRRVR-NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
            E G L+H+  +   M     +  N +++ ++K GKL  AR  F+ M E+  V+W  +I 
Sbjct: 54  LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG--- 288
           GY Q  ++ EA RL+  M R  I+   VT   L+  + +L   +V +++   +  LG   
Sbjct: 114 GYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY 173

Query: 289 ----------------------------ITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
                                       +  D  T+  +++G++  G   +A++LF E+ 
Sbjct: 174 NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELH 233

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
             G+ P+  T  + +SA   L     G ++H   +K  F  +V VGN+L++ YSK ++++
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVD 293

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
              ++F  + + D  S+N +I  Y   G   ++++LF K+Q +        +  L+S   
Sbjct: 294 EVGKLFXEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIAT 353

Query: 441 QNGN----------------------EDEAVDLFQRMGKNDKVKR--------NTASWNS 470
            + N                      E+  VD++ +   + + ++        +T  W +
Sbjct: 354 SSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTA 413

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +I+ Y Q G+    + VF  M+ +    +  T  S+L ACA L + +  +++H  ++R  
Sbjct: 414 MISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSG 473

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
             S++   ++L+DTYAK G +  +   F  M  ++ ++WN+LI  Y  +G     L+ F 
Sbjct: 474 FMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQ 533

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           QM   G KP+  +FLS++ A S  G V+     F S+T+ Y++ P  EHY++M+D+  R+
Sbjct: 534 QMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRN 593

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP-GDVLIQRLI 709
           G+ +EA + + +MP EP   +W ++L +CRIH N +LA  A +RLF++E   D      +
Sbjct: 594 GRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINM 653

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             IYA+ G+ ++  KV+K  R+   R      W+E+K+  + F     S      +   +
Sbjct: 654 SNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKI 713

Query: 770 QNVPENVTARSSHSGLCIEEEEKEEISGI-----HSEKLALAFALIGSSQAPHTIRIVKN 824
             + + +  +           + +E+  I     HSE+ A+AFAL+ +      I ++KN
Sbjct: 714 NALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGS-PIVVMKN 772

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +R C  CH   K +S +   EI + DS   HHFK+G CSCGDYW
Sbjct: 773 LRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 152/600 (25%), Positives = 263/600 (43%), Gaps = 83/600 (13%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           ++S + K G L  ARE+F+ M ER   +W+ +IG Y +  + +E   L+  M + G+ PD
Sbjct: 80  MISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPD 139

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
                 +L   G          +H+ VIKLG      V NS++  Y K   L  A + F+
Sbjct: 140 YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------------- 261
            M  KD V +NS+++GY   G N+EA  LF ++    IK    TF               
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF 259

Query: 262 --------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                               N L+  Y++  Q D   ++   M  L    D  ++  +I+
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPEL----DGISYNVVIT 315

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
            +A NG+  ++ DLF+++ F           + +S  T    L MG +IH  A+ +G   
Sbjct: 316 SYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANF 375

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           +  V N+L++MY+KC   + A+++FD I  K    W +MI+ Y Q G   +   +F  M+
Sbjct: 376 ESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMR 435

Query: 422 ESDVPPNVITWNVLI---------------------SGYIQNGNEDEA-VDLFQRMG-KN 458
            + VP +  T+  ++                     SG++ N     A +D + + G   
Sbjct: 436 RTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMT 495

Query: 459 DKVK-------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           D +K       RN+ SWN+LI+ Y Q G  +  L  F++M  S + P+ V+ LSVL AC+
Sbjct: 496 DAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS 555

Query: 512 Y-------LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-S 563
           +       L   N + +I+    +R   +      S++D   ++G    +  +   M   
Sbjct: 556 HCGFVEEALWHFNSMTQIYEVTPKREHYT------SMVDVLCRNGRFDEAEKLMTEMPFE 609

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
              I W+S++    +H     A    D++ +     +   ++++   +++AG  D   KV
Sbjct: 610 PSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKV 669



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 143/590 (24%), Positives = 270/590 (45%), Gaps = 92/590 (15%)

Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
           +  L+ + ++K G +      N  +  +++ G L+ A + F+ M  K+ ++ N MISG+ 
Sbjct: 26  SNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHL 85

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
           + G+  +A  LFD                                MV+R           
Sbjct: 86  KFGKLSKARELFDG-------------------------------MVERT--------AV 106

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +WT +I G+ Q+ ++ +A  L+ +M   G+ P+ VT+ + +S   +L+   + ++IH+  
Sbjct: 107 SWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHV 166

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           +K+G+  +++V NSL++ Y K   L  A ++F  + +KD  ++NS++ GY   G   +A 
Sbjct: 167 IKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAI 226

Query: 415 ELFIKMQESDVPP-----------------------------------NVITWNVLISGY 439
           ELF+++  S + P                                   NV   N L+  Y
Sbjct: 227 ELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYY 286

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF--- 496
            ++   DE   LF  M + D +     S+N +I  Y   GQ   +  +FRK+Q + F   
Sbjct: 287 SKHDQVDEVGKLFXEMPELDGI-----SYNVVITSYAWNGQFKESFDLFRKLQFTRFDRR 341

Query: 497 -YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
            +P   T+LS+  +   L      ++IH   +         V N+L+D YAK      ++
Sbjct: 342 QFP-FATLLSIATSSLNLRMG---RQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQ 397

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            IFD ++ K  + W ++I  YV  G     +++F  M+  G+  ++ TF SI+ A +   
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLA 457

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
            + LG+++   +      +  +   SA++D Y + G + +A++   +MP E +S  W AL
Sbjct: 458 SISLGRQLHSLLIRS-GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWNAL 515

Query: 676 LTACRIHGNIDLAVLAIERLFD--LEPGDVLIQRLILQIYAICGKPEDAL 723
           ++A   +GN+D  + + +++     +P  V     +L   + CG  E+AL
Sbjct: 516 ISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLS-VLSACSHCGFVEEAL 564



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 229/485 (47%), Gaps = 37/485 (7%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T + LL    +  + ++  ++H   + L  E ++ V   L+  Y K  CL  A ++F+ M
Sbjct: 142 TLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHM 201

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             ++  T+++++  YS +    E +ELF  +   G+ P DF F  +L A     D + G+
Sbjct: 202 LNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQ 261

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H  V+K        V N++L  Y K  ++    + F  M E DG+++N +I+ Y   G
Sbjct: 262 QVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFXEMPELDGISYNVVITSYAWNG 321

Query: 238 ENDEAHRLFDKMC-----REEIK----LGVVTFNILIRSYNQL----------------- 271
           +  E+  LF K+      R +      L + T ++ +R   Q+                 
Sbjct: 322 QFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN 381

Query: 272 ------GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
                  +C+   E  K  +++     V  WT MIS + Q G+  + +++F +M   GV 
Sbjct: 382 ALVDMYAKCNGDKEAQKIFDNIACKSTV-PWTAMISAYVQKGKHEEGINVFSDMRRTGVP 440

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
            +  T  S + AC +L ++++G ++HSL ++ GF  +V  G++L++ Y+KC  +  A + 
Sbjct: 441 ADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKS 500

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
           F  + +++  SWN++I+ Y Q G        F +M +S   P+ +++  ++S     G  
Sbjct: 501 FGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFV 560

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           +EA+  F  M +  +V      + S++    + G+ + A  +  +M    F P+ +   S
Sbjct: 561 EEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMP---FEPSEIMWSS 617

Query: 506 VLPAC 510
           VL +C
Sbjct: 618 VLNSC 622



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 173/370 (46%), Gaps = 10/370 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFV 93
           NG+  E+  +   +       R+  +  LL     S ++ + R++H   + +    +  V
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRV 379

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           +  L+ +YAKC    +A+++F+++  ++   W+AMI AY +  +  E + +F  M + G+
Sbjct: 380 ENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGV 439

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             D   F  IL+AC N      G+ +HSL+I+ G        +++L  Y KCG +  A +
Sbjct: 440 PADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIK 499

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F  M E++ V+WN++IS Y Q G  D     F +M +   K   V+F  ++ + +  G 
Sbjct: 500 SFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGF 559

Query: 274 CDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            + A+     M  +  +TP    +T M+    +NGR  +A  L  EM F    P+ +  +
Sbjct: 560 VEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPF---EPSEIMWS 616

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           S +++C   K   +  +       M    D     ++ N+Y+   + +   +V   ++D+
Sbjct: 617 SVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDR 676

Query: 393 DV-----YSW 397
            V     YSW
Sbjct: 677 GVRKVPAYSW 686


>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 218/718 (30%), Positives = 336/718 (46%), Gaps = 116/718 (16%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D F FP +L+A      F  G  +H L  KLG      ++  ++A+Y  C +++ AR   
Sbjct: 120 DRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARL-- 177

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
                                        LFDKMC                         
Sbjct: 178 -----------------------------LFDKMCH------------------------ 184

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
                          PD   W  +I G+ QNG    AL LF++M    + P+ V + + +
Sbjct: 185 ---------------PDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVL 229

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
           SAC     L+ G  IH      G+  D  +  +LINMY+ C  ++ A +++D +  K   
Sbjct: 230 SACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSK--- 286

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
                                           ++I    ++SGY + G   +A  +F +M
Sbjct: 287 --------------------------------HLIVSTAMLSGYAKLGMVKDARFIFDQM 314

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
                ++R+   W+++I+GY +  Q   AL +F +M      P+ +T+LSV+ AC+++ A
Sbjct: 315 -----IERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGA 369

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
             +   IH  V R     +L V N+LID YAK GN+V +R +F+ M  K++I+W+S+I  
Sbjct: 370 LAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINA 429

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
           + +HG   +A+ LF +MK   ++PN  TF+ ++ A   AG+V+ G+K+F S+   + I P
Sbjct: 430 FAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISP 489

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
             EHY  M+DLY R+  L +A+E IE MP  P+  IW +L++AC++HG  +L   A +RL
Sbjct: 490 TREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRL 549

Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
            +LEP       ++  IYA   +  D   +RK               IE+ N V+ F+  
Sbjct: 550 LELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMA 609

Query: 756 GWSESYSDLLYSWLQNVPEN---VTARSSHSGLCI--EEEEKEEISGIHSEKLALAFALI 810
                 SD +Y  L  V      V  + S SG+ I  EEE+K+E+   HSEKLA+ + LI
Sbjct: 610 DRYHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLI 669

Query: 811 GSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            S +    IRIVKN+R+C  CH   K VS ++  EI + D    HH   G CSC DYW
Sbjct: 670 -SRRNESCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 220/463 (47%), Gaps = 43/463 (9%)

Query: 49  ATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFVKTKLLSVYAKCGCL 107
           A     + R ++ +LL+A    ++ +   ++H   + +  +D  F++T L+++YA C  +
Sbjct: 113 AINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRI 172

Query: 108 DDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC 167
            DAR +F+ M   +   W+ +I  Y ++  + + + LF  M    + PD  +   +L AC
Sbjct: 173 MDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSAC 232

Query: 168 GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
           G+ G+   G+ +H  V   G +    ++ +++ +Y  CG +  AR+ ++ +  K  +   
Sbjct: 233 GHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVST 292

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
           +M+SGY ++G   +A  +FD+M                                      
Sbjct: 293 AMLSGYAKLGMVKDARFIFDQM-------------------------------------- 314

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
            I  D+  W+ MISG+A++ +  +AL LF EM     +P+ +T+ S ISAC+ + ALA  
Sbjct: 315 -IERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQA 373

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
             IH+   + GF   + V N+LI+MY+KC  L  A  VF+ +  K+V SW+SMI  +   
Sbjct: 374 NWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMH 433

Query: 408 GYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTAS 467
           G    A +LF +M+E ++ PN +T+  ++      G  +E   LF  M     +      
Sbjct: 434 GNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREH 493

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +  ++  Y +      A+ +   M    F PN +   S++ AC
Sbjct: 494 YGCMVDLYCRANFLRKAIELIETMP---FAPNVIIWGSLMSAC 533



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 155/308 (50%), Gaps = 8/308 (2%)

Query: 33  CGN-GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV 91
           CG+ G L+   T+ + +   G  +  +    L+    +  ++ LARK++  L   +   +
Sbjct: 232 CGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGL---SSKHL 288

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            V T +LS YAK G + DAR +F+ M ER+L  WSAMI  Y+   + +E ++LF  M+Q 
Sbjct: 289 IVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQK 348

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
              PD      ++ AC + G       +H+ V + G      V N+++ +Y KCG L+ A
Sbjct: 349 RSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKA 408

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R  FE+M  K+ ++W+SMI+ +   G  D A +LF +M    I+   VTF  ++ +    
Sbjct: 409 REVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHA 468

Query: 272 GQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  +   ++   M    GI+P    + CM+  + +     +A++L + M F    PN + 
Sbjct: 469 GLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFA---PNVII 525

Query: 331 ITSAISAC 338
             S +SAC
Sbjct: 526 WGSLMSAC 533


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 208/643 (32%), Positives = 330/643 (51%), Gaps = 47/643 (7%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+   + LGQ   A ++          PDVF W  +I  +++N      +++++ M + G
Sbjct: 94  LVNGSSNLGQICYARKLFDEF----CYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTG 149

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V P+G T    + ACT+L    +   IH   +K GF  DV V N L+ +Y+KC  +  A+
Sbjct: 150 VHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAK 209

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY---- 439
            VFD +  + + SW S+I+GY Q G   +A  +F +M+ + V P+ I    ++  Y    
Sbjct: 210 VVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVD 269

Query: 440 ------------IQNGNEDEAVDLFQ-----------RMGKN--DKVKR-NTASWNSLIA 473
                       I+ G EDE   L              + K+  D++K  N   WN++I+
Sbjct: 270 DLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMIS 329

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
           GY + G    A+ +F  M S    P+ VT+ S + A A + +    + +   V + +  S
Sbjct: 330 GYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGS 389

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
            + V  SLID YAK G++ ++R +FD  S KD++ W+++I GY LHG    A++L+  MK
Sbjct: 390 DIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMK 449

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
             G+ PN  TF+ ++ A + +G+V  G ++F  + + ++I+P  EHYS ++DL GR+G L
Sbjct: 450 QAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKD-FEIVPRNEHYSCVVDLLGRAGYL 508

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIY 713
            EA  FI  +PIEP  S+W ALL+AC+I+  + L   A  +LF L+P +      +  +Y
Sbjct: 509 GEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQLSNLY 568

Query: 714 AICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP 773
           A     +    VR L RE       G   IE+   +  F  G  S   +  ++  LQ + 
Sbjct: 569 ASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDELQRLE 628

Query: 774 ENV--------TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNI 825
             +        T    H    +  EEKEE    HSE++A+A+ LI ++    T+RI KN+
Sbjct: 629 RRLKEVGFVPYTESVLHD---LNYEEKEENLSFHSERIAVAYGLISTAPGT-TLRITKNL 684

Query: 826 RMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           R CV+CH   K +S +   EI + D+   HHFK+G CSCGDYW
Sbjct: 685 RACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 207/404 (51%), Gaps = 31/404 (7%)

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           F+ TKL++  +  G +  AR++F++    +++ W+A+I +YSR+  +R+ VE++  M   
Sbjct: 89  FLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWT 148

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+ PD F FP +L+AC    DF    ++H  +IK G      V+N ++A+Y KCG +  A
Sbjct: 149 GVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVA 208

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           +  F+ +  +  V+W S+ISGY Q G+  EA R+F +M    +K   +    ++R+Y  +
Sbjct: 209 KVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDV 268

Query: 272 GQCDVAMEMVKRMESLGI-------------------------------TPDVFTWTCMI 300
              +    +   +  +G+                               T +V  W  MI
Sbjct: 269 DDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMI 328

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           SG+A+NG   +A++LF  M    + P+ VT+ SA+ A   + +L +   +     K  + 
Sbjct: 329 SGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYG 388

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D+ V  SLI+MY+KC  +E A RVFD   DKDV  W++MI GY   G   +A  L+  M
Sbjct: 389 SDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVM 448

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
           +++ V PN +T+  L++    +G   E  +LF  M   + V RN
Sbjct: 449 KQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPRN 492



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 187/412 (45%), Gaps = 66/412 (16%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  +L+AC +     L+  +H   +      DVFV+  L+++YAKCG +  A+ VF+ +
Sbjct: 156 TFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGL 215

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             R + +W+++I  Y+++ +  E + +F  M  +G+ PD      IL+A  +  D E G+
Sbjct: 216 YHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGR 275

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H  VIK+G+     +  S+ A Y KCG +  A+ FF+ M   + + WN+MISGY + G
Sbjct: 276 SIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNG 335

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA-------------------- 277
             +EA  LF  M    IK   VT    + +  Q+G  ++A                    
Sbjct: 336 HAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNT 395

Query: 278 -----------MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
                      +E  +R+       DV  W+ MI G+  +G+  +A++L+  M   GV P
Sbjct: 396 SLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFP 455

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           N VT    ++AC            HS  VK G+                  EL    + F
Sbjct: 456 NDVTFIGLLTACN-----------HSGLVKEGW------------------ELFHCMKDF 486

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           +++   + YS    + G  +AGY G+A    +K+    + P V  W  L+S 
Sbjct: 487 EIVPRNEHYSCVVDLLG--RAGYLGEACAFIMKIP---IEPGVSVWGALLSA 533



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 174/369 (47%), Gaps = 40/369 (10%)

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           +IH+  V  G   +  +   L+N  S   ++  A ++FD     DV+ WN++I  Y +  
Sbjct: 74  QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISG--------------------------YIQN 442
                 E++  M+ + V P+  T+  ++                            ++QN
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193

Query: 443 GNEDEAVDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           G     V L+ + G     K        R   SW S+I+GY Q G+   AL +F +M+++
Sbjct: 194 G----LVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNN 249

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              P+ + ++S+L A   +    + + IHG V++  LE    ++ SL   YAK G +  +
Sbjct: 250 GVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVA 309

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           ++ FD M + ++I WN++I GY  +G    A++LF  M S  +KP+  T  S +LA +  
Sbjct: 310 KSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQV 369

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G ++L + +   +++      +  + +++ID+Y + G +E A   + D   + D  +W A
Sbjct: 370 GSLELAQWMDDYVSKSNYGSDIFVN-TSLIDMYAKCGSVEFARR-VFDRNSDKDVVMWSA 427

Query: 675 LLTACRIHG 683
           ++    +HG
Sbjct: 428 MIMGYGLHG 436



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 147/317 (46%), Gaps = 10/317 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG+  EA+ +   +   G K      +++L+A  D + +   R +H F + +  E +  +
Sbjct: 233 NGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPAL 292

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L + YAKCG +  A+  F+ M+  N+  W+AMI  Y+++    E V LF  M+   +
Sbjct: 293 LISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNI 352

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD       + A    G  E  + M   V K        V  S++ +Y KCG + +ARR
Sbjct: 353 KPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARR 412

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+   +KD V W++MI GY   G+  EA  L+  M +  +    VTF  L+ + N  G 
Sbjct: 413 VFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGL 472

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP--NGVTI 331
                E+   M+   I P    ++C++    + G   +A       +F+  +P   GV++
Sbjct: 473 VKEGWELFHCMKDFEIVPRNEHYSCVVDLLGRAGYLGEAC------AFIMKIPIEPGVSV 526

Query: 332 TSA-ISACTDLKALAMG 347
             A +SAC   + + +G
Sbjct: 527 WGALLSACKIYRCVTLG 543


>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 874

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 220/728 (30%), Positives = 366/728 (50%), Gaps = 91/728 (12%)

Query: 179 MHSLVIKLGMSCVRRVRNSVLAV--YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           +HS  IK G+S        V+      + G + +AR+ F+ + +     WN+MI GY +I
Sbjct: 54  IHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRI 113

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM---------------- 280
             ++    L+  M    IK    TF  L++ + +    D+A++                 
Sbjct: 114 NCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTK----DMALKYGKVLLNHAVIHGFLDS 169

Query: 281 --------------------VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
                                +++  +G   +V TW  ++SG+ +  R  ++  LF EM 
Sbjct: 170 NLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEME 229

Query: 321 FVG--VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD-DVLVGNSLINMYSKCE 377
                V PN VT+   +SAC+ LK L  G  I++  +K G  + ++++ N+LI+M++ C 
Sbjct: 230 KKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCG 289

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           E++AA  VFD +K +DV                                   I+W  +++
Sbjct: 290 EMDAARGVFDEMKTRDV-----------------------------------ISWTSIVT 314

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
           G+      D A   F +M + D V     SW ++I GY ++ +    L +FR MQ S   
Sbjct: 315 GFANTCRIDLARKYFDQMPERDYV-----SWTAMIDGYLRMNRFKEVLTLFRDMQMSNVK 369

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P+  T++S+L ACA+L A    +     + +  +++   + N+LID Y K GN+  ++ I
Sbjct: 370 PDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKI 429

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           F+ M  KD  TW ++I G   +G    AL +F  M    + P+  T++ ++ A +  G+V
Sbjct: 430 FNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLV 489

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
             GK  F ++   + I P + HY  M+DL GR+G L+EA+E I +MP++P+S +W +LL 
Sbjct: 490 AKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLG 549

Query: 678 ACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNS 737
           ACR+H N+ LA +A   + +LEP +  +  L+  IYA C K ++   VRK+  E   +  
Sbjct: 550 ACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKI 609

Query: 738 FGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEK 792
            G   +E+  +VY FV G  S   S  +Y+ L+N+ +++     +  +S   L + EE+K
Sbjct: 610 PGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKLENMKQDLSNAGYSPDTSEVFLDVGEEDK 669

Query: 793 EEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
           E    +HSEKLA+A+ALI S +   TIRIVKN+RMCV CH  A  VS +++ E+ + D  
Sbjct: 670 ETALYMHSEKLAIAYALISSGKGV-TIRIVKNLRMCVDCHHMAMVVSKVYNRELIVRDKT 728

Query: 853 CLHHFKNG 860
             HHF++G
Sbjct: 729 RFHHFRHG 736



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 133/522 (25%), Positives = 228/522 (43%), Gaps = 81/522 (15%)

Query: 61  INLLQAC---IDSNSIH---LARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVF 114
           I+LL+ C    + N IH   +   L +    +T++ +F  TK      + G +  AR+VF
Sbjct: 39  ISLLETCNTMYEINQIHSQTIKTGLSSNHLFLTKVIIFCCTK------ESGDVYYARKVF 92

Query: 115 EDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE 174
           +++ + +++ W+ MI  YSR       V L+ LM+   + PD F FP +L+        +
Sbjct: 93  DEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALK 152

Query: 175 AGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
            GK L++  VI   +     V+   + ++  CG + +AR+ F+  D  + V WN ++SGY
Sbjct: 153 YGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGY 212

Query: 234 FQIGENDEAHRLF---DKMCR------------------------------EEIKLGVVT 260
            +    +E+ RLF   +K C                               + IK G+V 
Sbjct: 213 NRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVE 272

Query: 261 FNI-----LIRSYNQLGQCDVAMEMVKRMESLGITP------------------------ 291
            N+     LI  +   G+ D A  +   M++  +                          
Sbjct: 273 PNLILENALIDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQM 332

Query: 292 ---DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
              D  +WT MI G+ +  R  + L LF++M    V P+  T+ S ++AC  L AL +G 
Sbjct: 333 PERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGE 392

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
              +   K    +D  +GN+LI+MY KC  +E A+++F+ ++ KD ++W +MI G    G
Sbjct: 393 WAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNG 452

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           +  +A  +F  M E+ V P+ IT+  ++      G   +    F  M     +K N   +
Sbjct: 453 HGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHY 512

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             ++    + G    AL V   M      PN +   S+L AC
Sbjct: 513 GCMVDLLGRAGHLKEALEVIMNMPVK---PNSIVWGSLLGAC 551



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 145/306 (47%), Gaps = 5/306 (1%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DV   T +++ +A    +D AR+ F+ M ER+  +W+AMI  Y R  R++EV+ LF  M 
Sbjct: 305 DVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQ 364

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
              + PD+F    IL AC + G  E G+   + + K  +     + N+++ +Y KCG + 
Sbjct: 365 MSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALIDMYFKCGNVE 424

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A++ F  M +KD   W +MI G    G  +EA  +F  M    +    +T+  ++ +  
Sbjct: 425 KAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPDEITYIGVMCACT 484

Query: 270 QLGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
            +G           M    GI P++  + CM+    + G   +AL++   M    V PN 
Sbjct: 485 HVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMNMP---VKPNS 541

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
           +   S + AC   K + +  E+ +  +     ++  V   L N+Y+ C++ +    V  M
Sbjct: 542 IVWGSLLGACRVHKNVQLA-EMAANEILELEPENGAVYVLLCNIYAACKKWKNLHNVRKM 600

Query: 389 IKDKDV 394
           + ++ +
Sbjct: 601 MMERGI 606



 Score = 46.6 bits (109), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 64/341 (18%), Positives = 140/341 (41%), Gaps = 69/341 (20%)

Query: 482 NNALGVF--RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
           N +L +F  R + ++  +    + +S+L  C  +    ++ +IH   ++  L S+   + 
Sbjct: 15  NLSLSLFLKRMISNTPLHSFVKSPISLLETCNTMY---EINQIHSQTIKTGLSSNHLFLT 71

Query: 540 SLID--TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
            +I      +SG++ Y+R +FD +    +  WN++I GY       + + L+  M    +
Sbjct: 72  KVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNI 131

Query: 598 KPNRGTFL---------------SIILAH---------------------SLAGMVDLGK 621
           KP+  TF                 ++L H                     SL G+V+  +
Sbjct: 132 KPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYAR 191

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP-----IEPDSSIWEALL 676
           K+F  + + ++++     ++ ++  Y R  + EE+     +M      + P+S     +L
Sbjct: 192 KIF-DMGDGWEVVT----WNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLML 246

Query: 677 TACRIHGNIDLAVLAIERLFD---LEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
           +AC    ++        +      +EP +++++  ++ ++A CG+ + A   R +  E  
Sbjct: 247 SACSKLKDLVGGKCIYNKYIKEGIVEP-NLILENALIDMFASCGEMDAA---RGVFDEMK 302

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPE 774
            R+     W  +       VTG  +    DL   +   +PE
Sbjct: 303 TRDVIS--WTSI-------VTGFANTCRIDLARKYFDQMPE 334


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 229/755 (30%), Positives = 362/755 (47%), Gaps = 114/755 (15%)

Query: 61  INLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
           ++LL+ CIDS  +   + +H   ++L  + ++ +   L+++Y  C     A+ VF+ +  
Sbjct: 7   LSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIEN 66

Query: 120 R-NLYTWSAMIGAYSRDQRWREVVELFFLMVQ-DGLFPDDFLFPKILQACGNCGDFEAGK 177
             ++  W+ ++ A +++  + E +E+F  ++    L PD F +P +L+AC   G    GK
Sbjct: 67  PLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGK 126

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
           ++H+ VIK G +                                D V  +S +  Y +  
Sbjct: 127 MVHTHVIKSGFAM-------------------------------DVVVMSSAVGMYAKCN 155

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
             ++A +LFD                               EM +R        DV +W 
Sbjct: 156 VFEDAIKLFD-------------------------------EMPER--------DVASWN 176

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            +IS + Q+G+  +AL+LF+EM   G  P+ VT+T+ IS+C  L  L  G EIH   V+ 
Sbjct: 177 NVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRS 236

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           GF  D  V ++L++MY KC  LE A+ VF+ I+ K+V SWNSMIAGY   G      ELF
Sbjct: 237 GFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELF 296

Query: 418 IKMQESDVPPNVITWNVL---------------ISGYI--------------------QN 442
            +M E  + P + T + +               I GYI                    + 
Sbjct: 297 RRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKC 356

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           GN   A ++FQ M K      N  SWN +I+GY ++G    AL +F  M+ +   P+ +T
Sbjct: 357 GNIGSAENVFQNMPKT-----NVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAIT 411

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
             SVLPAC+ L    K KEIH  ++   LE +  VM +L+D YAK G +  +  IF+ + 
Sbjct: 412 FTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLP 471

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            +D ++W S+I  Y  HG    AL LF++M+    KP++ TFL+I+ A S AG+VD G  
Sbjct: 472 ERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCY 531

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP-IEPDSSIWEALLTACRI 681
            F  +   Y   P +EHYS +IDL GR G+L EA E ++  P I  D  +   L +AC +
Sbjct: 532 YFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHL 591

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H  +DL       L + +P D     ++  +YA   K ++  KVR   +E   + + G  
Sbjct: 592 HKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCS 651

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV 776
           WIEV   ++ FV    S   +D++Y  +  +  +V
Sbjct: 652 WIEVGKRIHPFVVEDKSHPQADMIYECMSILASHV 686



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 235/464 (50%), Gaps = 32/464 (6%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           TY ++L+AC     +   + +H   +     +DV V +  + +YAKC   +DA ++F++M
Sbjct: 108 TYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEM 167

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            ER++ +W+ +I  Y +D +  + +ELF  M   G  PD      ++ +C    D E GK
Sbjct: 168 PERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGK 227

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H  +++ G +    V ++++ +Y KCG L  A+  FE +  K+ V+WNSMI+GY   G
Sbjct: 228 EIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKG 287

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILI----RSYN-QLGQCDVAMEMVKRMES------ 286
           ++     LF +M  E I+  + T + ++    RS N QLG+      +  R+E+      
Sbjct: 288 DSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNS 347

Query: 287 -----------LGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
                      +G   +VF         +W  MISG+ + G   +AL +F +M   GV P
Sbjct: 348 SLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKP 407

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           + +T TS + AC+ L  L  G EIH+  ++     + +V  +L++MY+KC  ++ A  +F
Sbjct: 408 DAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIF 467

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
           + + ++D  SW SMIA Y   G   +A +LF KMQ+SD  P+ +T+  ++S     G  D
Sbjct: 468 NQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVD 527

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
           E    F +M      K     ++ LI    ++G+   A  + ++
Sbjct: 528 EGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQR 571



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 184/396 (46%), Gaps = 45/396 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTE---IDV 91
           +G+  +A+ + + +   G K    T   ++ +C     +   +++H  + LV     +D 
Sbjct: 185 DGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIH--MELVRSGFALDG 242

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV + L+ +Y KCGCL+ A+EVFE ++ +N+ +W++MI  YS     +  +ELF  M ++
Sbjct: 243 FVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEE 302

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+ P       IL AC    + + GK +H  +I+  +     V +S++ +Y KCG +  A
Sbjct: 303 GIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSA 362

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------- 261
              F++M + + V+WN MISGY ++G   EA  +F  M +  +K   +TF          
Sbjct: 363 ENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQL 422

Query: 262 ----------NILIRS---------------YNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                     N +I S               Y + G  D A+ +  ++       D  +W
Sbjct: 423 AVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPE----RDFVSW 478

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG-MEIHSLAV 355
           T MI+ +  +G+  +AL LF++M      P+ VT  + +SAC+    +  G    + +  
Sbjct: 479 TSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIA 538

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           + GF   V   + LI++  +   L  A  +     D
Sbjct: 539 EYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPD 574



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 214/476 (44%), Gaps = 96/476 (20%)

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
           + S +  C D K L  G  IH   V +G  +++ +  SLIN+Y  C   ++A+ VF  I+
Sbjct: 6   LLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIE 65

Query: 391 DK-DVYSWNSMIA---------------------------------------GYCQAGYC 410
           +  D+  WN ++A                                       G  + GY 
Sbjct: 66  NPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYG 125

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
              +   IK   S    +V+  +  +  Y +    ++A+ LF  M      +R+ ASWN+
Sbjct: 126 KMVHTHVIK---SGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMP-----ERDVASWNN 177

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +I+ Y Q GQ   AL +F +M+ S F P+ VT+ +V+ +CA L+   + KEIH  ++R  
Sbjct: 178 VISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSG 237

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
                 V ++L+D Y K G +  ++ +F+ +  K++++WNS+I GY L G   + ++LF 
Sbjct: 238 FALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFR 297

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           +M   G++P   T  SI++A S +  + LGK +   I    ++   I   S++IDLY + 
Sbjct: 298 RMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIR-NRVEADIFVNSSLIDLYFKC 356

Query: 651 GKLEEAMEFIEDMP----------------------------------IEPDSSIWEALL 676
           G +  A    ++MP                                  ++PD+  + ++L
Sbjct: 357 GNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVL 416

Query: 677 TACRIHGNIDLAVLAIERLF-------DLEPGDVLIQRLILQIYAICGKPEDALKV 725
            AC       LAVL   +          LE  +V++  L L +YA CG  ++AL +
Sbjct: 417 PACS-----QLAVLEKGKEIHNFIIESKLEINEVVMGAL-LDMYAKCGAVDEALHI 466


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 205/637 (32%), Positives = 334/637 (52%), Gaps = 48/637 (7%)

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
           +C V  E  K  + +     + TW  MIS     G+T +A++L+  M F GV+P+  T +
Sbjct: 47  KCSVITEARKLFDEMP-NRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFS 105

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGF-TDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           +   A +++     G + H LAV +GF   D  V   +++MY+K  +++ A  VFD + D
Sbjct: 106 AIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLD 165

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-NVLIS----GYIQNGN-- 444
           KDV  + ++I GY Q G  G+A E+F  M  S + PN  T  +VL+S    G + NG   
Sbjct: 166 KDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLI 225

Query: 445 ----------------------------EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
                                        ++++ +F  +     V     +W S I G  
Sbjct: 226 HGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHV-----TWTSFIVGLV 280

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           Q G++  AL +FR+M      PN  T  S+L AC+ L      ++IH   ++  ++ +  
Sbjct: 281 QNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKY 340

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           V  +LI  Y K GN+  +R++F+ ++  D+++ N++I  Y  +GF H AL+LF++MK  G
Sbjct: 341 VDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLG 400

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
            KPN  TF+SI+LA + AG+V+ G ++F  I   + I    +HY+ MIDL GR+ + EEA
Sbjct: 401 HKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEA 460

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
              IE+    PD   W  LL AC+IHG +++A   ++++ D  P D     L+  IYA  
Sbjct: 461 AMLIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASA 519

Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV 776
           GK ++ ++++   R+   + +    W+++   V+TF+ G  S   +  +   L  + E V
Sbjct: 520 GKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKV 579

Query: 777 T--ARSSHSGLCIEE-EEKEEISGI--HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHC 831
                +  +   +++ EE+++IS +  HSEKLA+AFAL  +      IRI KN+R+C  C
Sbjct: 580 ITLGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGDC 639

Query: 832 HETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           H   K+VS++   +I   D+K  HHFK G CSC DYW
Sbjct: 640 HSWIKFVSLLTGRDIIARDAKRFHHFKGGICSCKDYW 676



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 243/531 (45%), Gaps = 65/531 (12%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           N Y +L+    +  S+   + LH  +     +  F   KL+  Y KC  + +AR++F++M
Sbjct: 2   NCYTSLIAQFTNKKSLTTLKSLHTHILKSGSLFSFFGHKLIDGYIKCSVITEARKLFDEM 61

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             R++ TW++MI ++    + +E +EL+  M+ +G+ PD + F  I +A    G    G+
Sbjct: 62  PNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQ 121

Query: 178 LMHSLVIKLGMSCVRR-VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
             H L + LG       V   ++ +Y K GK+  AR  F+ + +KD V + ++I GY Q 
Sbjct: 122 KAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQR 181

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG------------------------ 272
           G + EA  +F+ M    IK    T   ++ S   LG                        
Sbjct: 182 GLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQ 241

Query: 273 --------QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
                   +C++  + +K   SL     V TWT  I G  QNGR   AL +F+EM    +
Sbjct: 242 TSLLTMYSKCNMVEDSIKVFNSLAYASHV-TWTSFIVGLVQNGREEIALSMFREMIRCSI 300

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            PN  T +S + AC+ L  L  G +IH++ VK+G   +  V  +LI++Y KC  +E A  
Sbjct: 301 SPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARS 360

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           VF+ + + DV S N+MI  Y Q G+  +A ELF +M++    PNV+T+  ++      G 
Sbjct: 361 VFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGL 420

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY------P 498
            +E   +F  +  N  ++     +  +I          + LG  ++ + +         P
Sbjct: 421 VEEGCQIFSLIRNNHSIELTRDHYTCMI----------DLLGRAKRFEEAAMLIEEGKNP 470

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           + +   ++L AC          +IHG V     E +   M  ++D   + G
Sbjct: 471 DVIQWRTLLNAC----------KIHGEV-----EMAEKFMKKMLDQAPRDG 506



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 216/470 (45%), Gaps = 41/470 (8%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEI-DVFV 93
           G+  EAI + D++  +G      T+  + +A  +       +K H   + L  E+ D FV
Sbjct: 80  GKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV 139

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T ++ +YAK G + DAR VF+ + ++++  ++A+I  Y++     E +E+F  MV   +
Sbjct: 140 ATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRI 199

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+++    +L +CGN GD   GKL+H LV+K G+  V   + S+L +Y KC  +  + +
Sbjct: 200 KPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIK 259

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F S+     V W S I G  Q G  + A  +F +M R  I     TF+ ++ + + L  
Sbjct: 260 VFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAM 319

Query: 274 CDVAMEMVKRMESLGITP-------------------------------DVFTWTCMISG 302
            +   ++      LG+                                 DV +   MI  
Sbjct: 320 LEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYA 379

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK---MGF 359
           +AQNG   +AL+LF+ M  +G  PN VT  S + AC +   +  G +I SL      +  
Sbjct: 380 YAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIEL 439

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
           T D      +I++  + +  E A  + +  K+ DV  W +++   C+     +  E F+K
Sbjct: 440 TRDHY--TCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNA-CKIHGEVEMAEKFMK 496

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
                 P +  T  +L + Y   G  D  +++ +  G++ ++K+  A SW
Sbjct: 497 KMLDQAPRDGGTHILLTNIYASAGKWDNVIEM-KSAGRDLRLKKTPAMSW 545



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 3/251 (1%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  NGR   A+++   +          T+ ++L AC     +    ++HA  + L  + +
Sbjct: 279 LVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGN 338

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            +V   L+ +Y KCG ++ AR VFE + E ++ + + MI AY+++    E +ELF  M +
Sbjct: 339 KYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKK 398

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI-KLGMSCVRRVRNSVLAVYVKCGKLI 209
            G  P+   F  IL AC N G  E G  + SL+     +   R     ++ +  +  +  
Sbjct: 399 LGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFE 458

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A    E     D + W ++++     GE + A +   KM  +  + G  T  +L   Y 
Sbjct: 459 EAAMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDG-GTHILLTNIYA 517

Query: 270 QLGQCDVAMEM 280
             G+ D  +EM
Sbjct: 518 SAGKWDNVIEM 528



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 78/146 (53%), Gaps = 3/146 (2%)

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           + LID Y K   I  +R +FD M ++ I+TWNS+I  +V  G    A++L+D M   G+ 
Sbjct: 39  HKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVL 98

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVF-CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
           P+  TF +I  A S  G+   G+K    ++   +++       + ++D+Y + GK+++A 
Sbjct: 99  PDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV-ATGIVDMYAKFGKMKDA- 156

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHG 683
            F+ D  ++ D  ++ AL+      G
Sbjct: 157 RFVFDRVLDKDVVLFTALIVGYNQRG 182


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 227/646 (35%), Positives = 324/646 (50%), Gaps = 46/646 (7%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITP--DVFTWTCMISGFAQNGRTSQALDLFKEM 319
           N LI  Y++L   + A  +++      +TP  +V +WT +ISG AQNG  S AL  F EM
Sbjct: 46  NYLINMYSKLDHPESARLVLR------LTPARNVVSWTSLISGLAQNGHFSTALVEFFEM 99

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
              GV+PN  T   A  A   L+    G +IH+LAVK G   DV VG S  +MY K    
Sbjct: 100 RREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR 159

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-- 437
           + A ++FD I ++++ +WN+ I+     G   +A E FI+ +  D  PN IT+   ++  
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219

Query: 438 -------------GYIQNGNEDEAVD----LFQRMGKNDKVK-----------RNTASWN 469
                        G +     D  V     L    GK  +++           +N  SW 
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 279

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           SL+A Y Q  +   A  ++ + +      +   I SVL ACA +      + IH   ++ 
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            +E ++ V ++L+D Y K G I  S   FD M  K+++T NSLI GY   G    AL LF
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399

Query: 590 DQM--KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           ++M  +  G  PN  TF+S++ A S AG V+ G K+F S+   Y I P  EHYS ++D+ 
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 459

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           GR+G +E A EFI+ MPI+P  S+W AL  ACR+HG   L +LA E LF L+P D     
Sbjct: 460 GRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHV 519

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
           L+   +A  G+  +A  VR+  +    +   G  WI VKN V+ F     S   +  + +
Sbjct: 520 LLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQT 579

Query: 768 WLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
            L  +   + A      L      +EEEEK      HSEKLALAF L+ S      IRI 
Sbjct: 580 TLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLL-SLPLSVPIRIT 638

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN+R+C  CH   K+VS     EI + D+   H FK+G CSC DYW
Sbjct: 639 KNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 207/464 (44%), Gaps = 35/464 (7%)

Query: 63  LLQACIDSNSIHLARKLHAFL--NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           LL+  I ++S+ L R +HA +   L +    F+   L+++Y+K    + AR V      R
Sbjct: 12  LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           N+ +W+++I   +++  +   +  FF M ++G+ P+DF FP   +A  +      GK +H
Sbjct: 72  NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
           +L +K G      V  S   +Y K      AR+ F+ + E++   WN+ IS     G   
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM-------------------- 280
           EA   F +  R +     +TF   + + +     ++ M++                    
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI 251

Query: 281 -----VKRMESLGI------TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
                 K++ S  I      T +  +W  +++ + QN    +A  L+       V  +  
Sbjct: 252 DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDF 311

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
            I+S +SAC  +  L +G  IH+ AVK      + VG++L++MY KC  +E +E+ FD +
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 371

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV--PPNVITWNVLISGYIQNGNEDE 447
            +K++ + NS+I GY   G    A  LF +M        PN +T+  L+S   + G  + 
Sbjct: 372 PEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVEN 431

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            + +F  M     ++     ++ ++    + G    A    +KM
Sbjct: 432 GMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKM 475



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 175/442 (39%), Gaps = 75/442 (16%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-D 90
           L  NG  + A+     +  +G      T+    +A          +++HA       I D
Sbjct: 83  LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILD 142

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           VFV      +Y K    DDAR++F+++ ERNL TW+A I     D R RE +E F    +
Sbjct: 143 VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRR 202

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
               P+   F   L AC +      G  +H LV++ G      V N ++  Y KC ++  
Sbjct: 203 IDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRS 262

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           +   F  M  K+ V+W S+++ Y Q  E+++A  L+ +  R++I   V T + +I S   
Sbjct: 263 SEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR-SRKDI---VETSDFMISSVLS 318

Query: 271 LGQCDVAMEMVKRMESLGITP-----------------------------------DVFT 295
                  +E+ + + +  +                                     ++ T
Sbjct: 319 ACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVT 378

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSF--VGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
              +I G+A  G+   AL LF+EM+    G  PN +T  S +SAC+   A+  GM+I   
Sbjct: 379 RNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIF-- 436

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
                        +S+ + Y      E    + DM+                +AG   +A
Sbjct: 437 -------------DSMRSTYGIEPGAEHYSCIVDMLG---------------RAGMVERA 468

Query: 414 YELFIKMQESDVPPNVITWNVL 435
           YE   KM    + P +  W  L
Sbjct: 469 YEFIKKMP---IQPTISVWGAL 487


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 219/651 (33%), Positives = 331/651 (50%), Gaps = 79/651 (12%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++  W  M  G A +     AL L+  M  +G++PN  T    + +C   KA   G +I
Sbjct: 97  PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM---------------------- 388
           H   +K+G   D+ V  SLI+MY +   LE A +VFD                       
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216

Query: 389 ---------IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT-------- 431
                    I  KDV SWN+MI+GY + G   +A ELF  M +++V P+  T        
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276

Query: 432 --------------W-------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                         W             N LI  Y + G  + A  LF+R+   D +   
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI--- 333

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             SWN+LI GY  +     AL +F++M  S   PN VT+LS+LPACA+L A +  + IH 
Sbjct: 334 --SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV 391

Query: 525 CVLRR--SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
            + +R   + ++  +  SLID YAK G+I  +  +F+ +  K + +WN++I G+ +HG  
Sbjct: 392 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 451

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
            A+ DLF +M+  G++P+  TF+ ++ A S +GM+DLG+ +F ++T+ Y++ P +EHY  
Sbjct: 452 DASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGC 511

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           MIDL G SG  +EA E I  M +EPD  IW +LL AC++HGN++L     E L  +EP +
Sbjct: 512 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 571

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYS 762
                L+  IYA  G+  +  K R L  +   +   G   IE+ ++V+ F+ G      +
Sbjct: 572 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 631

Query: 763 DLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
             +Y  L+ +            +S     +EEE KE     HSEKLA+AF LI S++   
Sbjct: 632 REIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI-STKPGT 690

Query: 818 TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            + IVKN+R+C +CHE  K +S ++  EI   D    HHF++G CSC DYW
Sbjct: 691 KLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 203/438 (46%), Gaps = 71/438 (16%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           L  A  VF+ ++E NL  W+ M   ++        ++L+  M+  GL P+ + FP +L++
Sbjct: 84  LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C     F+ G+ +H  V+KLG      V  S++++YV+ G+L  A + F+    +D V++
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
            ++I GY   G  + A +LFD++  ++    VV++N +I  Y + G    A+E+ K M  
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKD----VVSWNAMISGYAETGNYKEALELFKDMMK 259

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
             + PD  T   ++S  AQ+G                                   ++ +
Sbjct: 260 TNVRPDESTMVTVVSACAQSG-----------------------------------SIEL 284

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G ++H      GF  ++ + N+LI++YSKC ELE A  +F+ +  KDV SWN++I GY  
Sbjct: 285 GRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH 344

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED-------------------- 446
                +A  LF +M  S   PN +T   ++      G  D                    
Sbjct: 345 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404

Query: 447 ----EAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
                 +D++ + G         N  + ++ +SWN++I G+   G+ + +  +F +M+  
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI 464

Query: 495 CFYPNCVTILSVLPACAY 512
              P+ +T + +L AC++
Sbjct: 465 GIQPDDITFVGLLSACSH 482



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 158/357 (44%), Gaps = 65/357 (18%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  +L++C  S +    +++H   L L  ++D++V T L+S+Y + G L+DA +VF+  
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195

Query: 118 RERNL--YT-----------------------------WSAMIGAYSRDQRWREVVELFF 146
             R++  YT                             W+AMI  Y+    ++E +ELF 
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M++  + PD+     ++ AC   G  E G+ +H  +   G     ++ N+++ +Y KCG
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           +L  A   FE +  KD ++WN++I GY  +    EA  LF +M R       VT   ++ 
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375

Query: 267 SYNQLGQCDVA------------------------MEMVKRMESLGITPDVF-------- 294
           +   LG  D+                         ++M  +   +     VF        
Sbjct: 376 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435

Query: 295 -TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
            +W  MI GFA +GR   + DLF  M  +G+ P+ +T    +SAC+    L +G  I
Sbjct: 436 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 157/312 (50%), Gaps = 15/312 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
            G   EA+ +   +     +   +T + ++ AC  S SI L R++H ++ +     ++ +
Sbjct: 244 TGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKI 303

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y+KCG L+ A  +FE +  +++ +W+ +IG Y+    ++E + LF  M++ G 
Sbjct: 304 VNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 363

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL--GMSCVRRVRNSVLAVYVKCGKLIWA 211
            P+D     IL AC + G  + G+ +H  + K   G++    +R S++ +Y KCG +  A
Sbjct: 364 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 423

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
            + F S+  K   +WN+MI G+   G  D +  LF +M +  I+   +TF  L+ + +  
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHS 483

Query: 272 GQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFK----EMSFVGVMP 326
           G  D+   + + M +   +TP +  + CMI     +G       LFK     ++ + + P
Sbjct: 484 GMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG-------LFKEAEEMINMMEMEP 536

Query: 327 NGVTITSAISAC 338
           +GV   S + AC
Sbjct: 537 DGVIWCSLLKAC 548


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 234/770 (30%), Positives = 393/770 (51%), Gaps = 81/770 (10%)

Query: 112 EVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG 171
           +VF++MR+R  + W+A+IGAY  +      + ++  M  +G+  D + FP +L+ACG   
Sbjct: 117 KVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLR 176

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK-DGVAWNSMI 230
           D  +G  +H +++KLG +    + N+++++Y K   L  A+R F++  EK D V WNS++
Sbjct: 177 DIRSGTELHCMLVKLGFNSTGFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSIL 236

Query: 231 SGYFQIGENDEAHRLFDKM------------------CR--EEIKLG------------- 257
           S Y   G++ E  +LF +M                  C      KLG             
Sbjct: 237 SSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHS 296

Query: 258 --VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             V   N LI  Y + G+   A  +++ M +     DV TW  +I G+ QN    +AL  
Sbjct: 297 FEVYVCNALIAMYARCGKMLEAGRILRLMNN----ADVVTWNSLIKGYVQNLMYKEALQF 352

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           F +M   G  P+ V++TS I+A   L  L  GME+H+  +K G+  ++LVGN+LI+MYSK
Sbjct: 353 FCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSK 412

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF------------------ 417
           C       R F M+ +KD+ SW ++IAGY       +A +LF                  
Sbjct: 413 CNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSI 472

Query: 418 ---IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQR---MGKNDKV-----KRNTA 466
                + +S +    I  ++L  G I    ++E VD++ +   MG   +V      ++  
Sbjct: 473 LRACSVLKSMLIVKEIHCHILRKGLIDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVV 532

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           SW S+I+     G +N A+ +FR+M  +    + V +L +L A A L A  K +EIHG +
Sbjct: 533 SWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYL 592

Query: 527 LRRS--LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
           LR+   LE S+ V  +++D YA  G++  ++ +FD +  K ++ + S+I  Y +HG   A
Sbjct: 593 LRKGFCLEGSIAV--AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKA 650

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPMIEHYSAM 643
           +++LF++M+   + P+  +FL+++ A S AG++D G++ F  I E  Y++ P  EHY  +
Sbjct: 651 SVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRR-FLKIMELEYKLEPWPEHYVCL 709

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           +D+ GR+  + EA EF++ M  EP + +W ALL ACR H   ++  +A +RL +LEP + 
Sbjct: 710 VDMLGRANCVVEAFEFVKMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNP 769

Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
               L+  ++A  G+  D  KVR   + +      G  WIE+   V+ F     S   + 
Sbjct: 770 GNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPETK 829

Query: 764 LLYSWLQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLALAF 807
            +Y  L  V   +   S +          ++E EK ++   HSE+LA+A+
Sbjct: 830 EIYEKLSEVTRKLERESGYLADTKFILHNVDEGEKVQMLHGHSERLAIAY 879



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 145/560 (25%), Positives = 263/560 (46%), Gaps = 42/560 (7%)

Query: 6   LTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQ 65
           L+  ++L     +K +    ++ L     +G+  E + +   +   G      T ++ L 
Sbjct: 213 LSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALT 272

Query: 66  ACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYT 124
           AC   +   L +++H A L      +V+V   L+++YA+CG + +A  +   M   ++ T
Sbjct: 273 ACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVT 332

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           W+++I  Y ++  ++E ++ F  M+  G  PD+     ++ A G   +  AG  +H+ VI
Sbjct: 333 WNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVI 392

Query: 185 KLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHR 244
           K G      V N+++ +Y KC    +  R F  M EKD ++W ++I+GY     + EA +
Sbjct: 393 KHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQ 452

Query: 245 LFDKMCREEIKLGVVTFNILIRS---------------------------YNQL----GQ 273
           LF  + ++ +++  +    ++R+                            N+L    G+
Sbjct: 453 LFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRKGLIDTVIQNELVDVYGK 512

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
           C       +  ES+    DV +WT MIS  A NG  ++A++LF+ M+  G++ + V +  
Sbjct: 513 CRNMGYASRVFESIK-GKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLC 571

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            +SA   L AL  G EIH   ++ GF  +  +  ++++MY+ C +L++A+ VFD I+ K 
Sbjct: 572 ILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKG 631

Query: 394 VYSWNSMIAGYCQAGYCGKA-YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLF 452
           +  + SMI  Y   G CGKA  ELF KM+  +V P+ I++  L+      G  DE     
Sbjct: 632 LLQYTSMINAYGMHG-CGKASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFL 690

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
           + M    K++     +  L+     LG+ N  +  F  ++     P      ++L AC  
Sbjct: 691 KIMELEYKLEPWPEHYVCLV---DMLGRANCVVEAFEFVKMMKTEPTTEVWCALLAAC-- 745

Query: 513 LVASNKVKEIHGCVLRRSLE 532
              S+  KEI     +R LE
Sbjct: 746 --RSHSEKEIGEIAAQRLLE 763


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 217/738 (29%), Positives = 354/738 (47%), Gaps = 70/738 (9%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE--- 252
           N +L+ Y   G L  A+  F S   ++   W  M+  +   G   +A  LF  M  E   
Sbjct: 78  NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 137

Query: 253 -----------------------EIKLGVVTF----NILIRSYNQLGQCDVAMEMVKRME 285
                                   IK G+ T     N L+ +Y + G    A  +   M 
Sbjct: 138 PDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMH 197

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
                 D  T+  M+ G ++ G  +QAL LF  M   G+     T +S ++    +  L 
Sbjct: 198 D----KDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLL 253

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
           +G ++H+L ++     +V V NSL++ YSKC+ L+   R+FD + ++D  S+N +IA Y 
Sbjct: 254 LGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYA 313

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITWNVLIS--GYIQN----------------GNED- 446
                     LF +MQ+      V+ +  ++S  G + +                 +ED 
Sbjct: 314 WNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 373

Query: 447 ---EAVDLFQRMGKNDKVKRNTA--------SWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
                +D++ + G  D  K N +        SW +LI GY Q GQ   AL +F  M+ + 
Sbjct: 374 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 433

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
             P+  T  S++ A + L      +++H  ++R   +SS+   + L+D YAK G +  + 
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 493

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
             FD M  ++ I+WN++I  Y  +G    A+ +F+ M   G  P+  TFLS++ A S  G
Sbjct: 494 RTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG 553

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
           + D   K F  +   Y I P  EHY+ +ID  GR G   +  + + +MP + D  IW ++
Sbjct: 554 LADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSI 613

Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
           L +CRIHGN +LA +A ++LF +EP D     ++  IYA  G+ EDA  V+K+ R+   R
Sbjct: 614 LHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVR 673

Query: 736 NSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEE 790
              G  W+E+K  +Y+F +   +    D +   L  + + +  +     +      ++ E
Sbjct: 674 KESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHE 733

Query: 791 EKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLAD 850
            K E    HSE+LA+AFAL+ ++ A   IRI+KN+  C+ CH   K +S + + +I + D
Sbjct: 734 LKLESLKYHSERLAIAFALM-NTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRD 792

Query: 851 SKCLHHFKNGQCSCGDYW 868
           S+  HHFK+G CSCGDYW
Sbjct: 793 SRRFHHFKDGVCSCGDYW 810



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 210/455 (46%), Gaps = 43/455 (9%)

Query: 36  GRLNEAITVLDSIATQGA---KVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDV 91
           GR ++A+++  ++  +G    +V   T +NL    + S        LH F +    +  V
Sbjct: 119 GRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPS--------LHPFAIKFGLDTHV 170

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV   LL  Y K G L  AR VF +M +++  T++AM+   S++    + ++LF  M + 
Sbjct: 171 FVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRA 230

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+    F F  IL           G  +H+LV++        V NS+L  Y KC  L   
Sbjct: 231 GIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDM 290

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           RR F+ M E+D V++N +I+ Y          RLF +M +      V+ +  ++     L
Sbjct: 291 RRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSL 350

Query: 272 GQCDVAMEMVKRMESLGITPD-------------------------------VFTWTCMI 300
               +  ++  ++  LG+  +                                 +WT +I
Sbjct: 351 PDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALI 410

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +G+ QNG+  +AL LF +M   G+ P+  T +S I A + L  + +G ++HS  ++ G+ 
Sbjct: 411 TGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYK 470

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
             V  G+ L++MY+KC  L+ A R FD + +++  SWN++I+ Y   G    A ++F  M
Sbjct: 471 SSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGM 530

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
                 P+ +T+  +++    NG  DE +  F  M
Sbjct: 531 LHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLM 565



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 174/394 (44%), Gaps = 23/394 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NG+  EA+ +   +   G +  R T+ ++++A      I L R+LH++L     +  VF 
Sbjct: 416 NGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFS 475

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAKCGCLD+A   F++M ERN  +W+A+I AY+     +  +++F  M+  G 
Sbjct: 476 GSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGF 535

Query: 154 FPDDFLFPKILQACGNCG-DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  +L AC + G   E  K  H +  +  +S  +     V+    + G     +
Sbjct: 536 NPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQ 595

Query: 213 RFFESMDEK-DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           +    M  K D + W S++      G  + A    DK+   E       + IL   Y + 
Sbjct: 596 KMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGME-PTDATPYVILSNIYARA 654

Query: 272 GQCDVAMEMVKRMESLGITPDV-FTWTCM---ISGFAQNGRTSQALD--------LFKEM 319
           GQ + A  + K M   G+  +  ++W  +   I  FA N  TS  +D        L+KEM
Sbjct: 655 GQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEM 714

Query: 320 SFVGVMPNGVTITSAISACT-DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM--YSKC 376
              G  P+   IT A+     +LK  ++      LA+      +   G  +  M   + C
Sbjct: 715 DKQGYKPD---ITCALHMVDHELKLESLKYHSERLAIAFALM-NTPAGTPIRIMKNLTAC 770

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
            +  A  ++   I ++D+   +S    + + G C
Sbjct: 771 LDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVC 804


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 208/764 (27%), Positives = 371/764 (48%), Gaps = 69/764 (9%)

Query: 173 FEAGKLMHSLVIKLGMSCVRRVR-NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
            E G L+H+  +   M     +  N +++ ++K GKL  AR  F+ M E+  V+W  +I 
Sbjct: 54  LERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMVERTAVSWTILIG 113

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG--- 288
           GY Q  ++ EA RL+  M R  I+   VT   L+  + +L   +V +++   +  LG   
Sbjct: 114 GYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEY 173

Query: 289 ----------------------------ITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
                                       +  D  T+  +++G++  G   +A++LF E+ 
Sbjct: 174 NLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELH 233

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
             G+ P+  T  + +SA   L     G ++H   +K  F  +V VGN+L++ YSK ++++
Sbjct: 234 NSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVD 293

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
              ++F  + + D  S+N +I  Y   G   ++++LF K+Q +        +  L+S   
Sbjct: 294 EVGKLFYEMPELDGISYNVVITSYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIAT 353

Query: 441 QNGN----------------------EDEAVDLFQRMGKNDKVKR--------NTASWNS 470
            + N                      E+  VD++ +   + + ++        +T  W +
Sbjct: 354 SSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTA 413

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +I+ Y Q G+    + VF  M+ +    +  T  S+L ACA L + +  +++H  ++R  
Sbjct: 414 MISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLLIRSG 473

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
             S++   ++L+DTYAK G +  +   F  M  ++ ++WN+LI  Y  +G     L+ F 
Sbjct: 474 FMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQ 533

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           QM   G KP+  +FLS++ A S  G V+     F S+T+ Y++ P  EHY++M+D+  R+
Sbjct: 534 QMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRN 593

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP-GDVLIQRLI 709
           G+ +EA + + +MP EP   +W ++L +CRIH N +LA  A +RLF++E   D      +
Sbjct: 594 GRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINM 653

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             IYA+ G+ ++  KV+K  R+   R      W+E+K+  + F     S      +   +
Sbjct: 654 SNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFSANDKSHPEMKKILRKI 713

Query: 770 QNVPENVTARSSHSGLCIEEEEKEEISGI-----HSEKLALAFALIGSSQAPHTIRIVKN 824
             + + +  +           + +E+  I     HSE+ A+AFAL+ +      I ++KN
Sbjct: 714 NALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFALMNTPDGS-PIVVMKN 772

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +R C  CH   K +S +   EI + DS   HHFK+G CSCGDYW
Sbjct: 773 LRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 152/600 (25%), Positives = 263/600 (43%), Gaps = 83/600 (13%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           ++S + K G L  ARE+F+ M ER   +W+ +IG Y +  + +E   L+  M + G+ PD
Sbjct: 80  MISGHLKFGKLSKARELFDGMVERTAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPD 139

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
                 +L   G          +H+ VIKLG      V NS++  Y K   L  A + F+
Sbjct: 140 YVTLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFK 199

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------------- 261
            M  KD V +NS+++GY   G N+EA  LF ++    IK    TF               
Sbjct: 200 HMLNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKF 259

Query: 262 --------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                               N L+  Y++  Q D   ++   M  L    D  ++  +I+
Sbjct: 260 GQQVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPEL----DGISYNVVIT 315

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
            +A NG+  ++ DLF+++ F           + +S  T    L MG +IH  A+ +G   
Sbjct: 316 SYAWNGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANF 375

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           +  V N+L++MY+KC   + A+++FD I  K    W +MI+ Y Q G   +   +F  M+
Sbjct: 376 ESRVENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMR 435

Query: 422 ESDVPPNVITWNVLI---------------------SGYIQNGNEDEA-VDLFQRMG-KN 458
            + VP +  T+  ++                     SG++ N     A +D + + G   
Sbjct: 436 RTGVPADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMT 495

Query: 459 DKVK-------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           D +K       RN+ SWN+LI+ Y Q G  +  L  F++M  S + P+ V+ LSVL AC+
Sbjct: 496 DAIKSFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACS 555

Query: 512 Y-------LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-S 563
           +       L   N + +I+    +R   +      S++D   ++G    +  +   M   
Sbjct: 556 HCGFVEEALWHFNSMTQIYEVTPKREHYT------SMVDVLCRNGRFDEAEKLMTEMPFE 609

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
              I W+S++    +H     A    D++ +     +   ++++   +++AG  D   KV
Sbjct: 610 PSEIMWSSVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKV 669



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 143/590 (24%), Positives = 270/590 (45%), Gaps = 92/590 (15%)

Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
           +  L+ + ++K G +      N  +  +++ G L+ A + F+ M  K+ ++ N MISG+ 
Sbjct: 26  SNHLIDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHL 85

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
           + G+  +A  LFD                                MV+R           
Sbjct: 86  KFGKLSKARELFDG-------------------------------MVERT--------AV 106

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +WT +I G+ Q+ ++ +A  L+ +M   G+ P+ VT+ + +S   +L+   + ++IH+  
Sbjct: 107 SWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIHTHV 166

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           +K+G+  +++V NSL++ Y K   L  A ++F  + +KD  ++NS++ GY   G   +A 
Sbjct: 167 IKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHMLNKDTVTFNSLMTGYSNEGLNEEAI 226

Query: 415 ELFIKMQESDVPP-----------------------------------NVITWNVLISGY 439
           ELF+++  S + P                                   NV   N L+  Y
Sbjct: 227 ELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNALLDYY 286

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF--- 496
            ++   DE   LF  M + D +     S+N +I  Y   GQ   +  +FRK+Q + F   
Sbjct: 287 SKHDQVDEVGKLFYEMPELDGI-----SYNVVITSYAWNGQFKESFDLFRKLQFTRFDRR 341

Query: 497 -YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
            +P   T+LS+  +   L      ++IH   +         V N+L+D YAK      ++
Sbjct: 342 QFP-FATLLSIATSSLNLRMG---RQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQ 397

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            IFD ++ K  + W ++I  YV  G     +++F  M+  G+  ++ TF SI+ A +   
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLA 457

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
            + LG+++   +      +  +   SA++D Y + G + +A++   +MP E +S  W AL
Sbjct: 458 SISLGRQLHSLLIRS-GFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWNAL 515

Query: 676 LTACRIHGNIDLAVLAIERLFD--LEPGDVLIQRLILQIYAICGKPEDAL 723
           ++A   +GN+D  + + +++     +P  V     +L   + CG  E+AL
Sbjct: 516 ISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLS-VLSACSHCGFVEEAL 564



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 229/485 (47%), Gaps = 37/485 (7%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T + LL    +  + ++  ++H   + L  E ++ V   L+  Y K  CL  A ++F+ M
Sbjct: 142 TLVTLLSGFGELETKNVIVQIHTHVIKLGYEYNLMVCNSLVDAYCKTHCLYLASQLFKHM 201

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             ++  T+++++  YS +    E +ELF  +   G+ P DF F  +L A     D + G+
Sbjct: 202 LNKDTVTFNSLMTGYSNEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQ 261

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H  V+K        V N++L  Y K  ++    + F  M E DG+++N +I+ Y   G
Sbjct: 262 QVHGFVLKTNFVWNVFVGNALLDYYSKHDQVDEVGKLFYEMPELDGISYNVVITSYAWNG 321

Query: 238 ENDEAHRLFDKMC-----REEIK----LGVVTFNILIRSYNQL----------------- 271
           +  E+  LF K+      R +      L + T ++ +R   Q+                 
Sbjct: 322 QFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVEN 381

Query: 272 ------GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
                  +C+   E  K  +++     V  WT MIS + Q G+  + +++F +M   GV 
Sbjct: 382 ALVDMYAKCNGDKEAQKIFDNIACKSTV-PWTAMISAYVQKGKHEEGINVFSDMRRTGVP 440

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
            +  T  S + AC +L ++++G ++HSL ++ GF  +V  G++L++ Y+KC  +  A + 
Sbjct: 441 ADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKS 500

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
           F  + +++  SWN++I+ Y Q G        F +M +S   P+ +++  ++S     G  
Sbjct: 501 FGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFV 560

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           +EA+  F  M +  +V      + S++    + G+ + A  +  +M    F P+ +   S
Sbjct: 561 EEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMP---FEPSEIMWSS 617

Query: 506 VLPAC 510
           VL +C
Sbjct: 618 VLNSC 622



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 173/370 (46%), Gaps = 10/370 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFV 93
           NG+  E+  +   +       R+  +  LL     S ++ + R++H   + +    +  V
Sbjct: 320 NGQFKESFDLFRKLQFTRFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRV 379

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           +  L+ +YAKC    +A+++F+++  ++   W+AMI AY +  +  E + +F  M + G+
Sbjct: 380 ENALVDMYAKCNGDKEAQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGV 439

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             D   F  IL+AC N      G+ +HSL+I+ G        +++L  Y KCG +  A +
Sbjct: 440 PADQATFASILRACANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIK 499

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F  M E++ V+WN++IS Y Q G  D     F +M +   K   V+F  ++ + +  G 
Sbjct: 500 SFGEMPERNSVSWNALISAYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGF 559

Query: 274 CDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            + A+     M  +  +TP    +T M+    +NGR  +A  L  EM F    P+ +  +
Sbjct: 560 VEEALWHFNSMTQIYEVTPKREHYTSMVDVLCRNGRFDEAEKLMTEMPF---EPSEIMWS 616

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           S +++C   K   +  +       M    D     ++ N+Y+   + +   +V   ++D+
Sbjct: 617 SVLNSCRIHKNHELAKKAADRLFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDR 676

Query: 393 DV-----YSW 397
            V     YSW
Sbjct: 677 GVRKVPAYSW 686


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 233/781 (29%), Positives = 383/781 (49%), Gaps = 81/781 (10%)

Query: 162 KILQACGNCGDFEAGKLMHSLVIK---LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
           K+L +    GD   G+ +H  +++   L    V  V NS+L +Y KCG +  ARR F+ M
Sbjct: 45  KLLTSAARAGDLRLGRALHRRLLRSEILDTDAV--VANSLLTMYSKCGAVEAARRVFDQM 102

Query: 219 -DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-YNQ------ 270
              +D V+W +M S   + G   E+ RL  +M    ++    T     R+ + Q      
Sbjct: 103 CGVRDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLA 162

Query: 271 ----LG--------QCDVA-----MEMVKRMESLGITPDVF---------TWTCMISGFA 304
               LG          DV+     ++M  R   L     VF          WT +I+ + 
Sbjct: 163 GGVVLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYV 222

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           Q G  S+ ++LF  M   G  P+G +++S ISACT+L ++ +G ++HS+A+++G   D  
Sbjct: 223 QAGCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSC 282

Query: 365 VGNSLINMYSKCE---ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC-GKAYELFIKM 420
           V   L++MY+K +    +E A +VF  +   +V SW ++I+GY Q+G        LF +M
Sbjct: 283 VSCGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREM 342

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
               + PN IT++ L+       ++D    +   + K      N    N+L++ Y + G 
Sbjct: 343 LNESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVG-NALVSMYAESGC 401

Query: 481 KNNALGVFRKM-----------------QSSCFYP--------NCVTILSVLPACAYLVA 515
              A   F ++                  +SC           +  T  S+L A A +  
Sbjct: 402 MEEARKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDDGVSTFTFASLLSAAASVGL 461

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
             K +++H   ++    S   + NSL+  YA+ G +  +   FD M   ++I+W S+I G
Sbjct: 462 LTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISG 521

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
              HG+   AL +F  M   G+KPN  T+++++ A S  G+V  GK+ F S+ + + ++P
Sbjct: 522 LAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLP 581

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
            +EHY+ ++DL  RSG +EEA +FI +MP + D+ +W+ LL+ACR +GN ++  +A   +
Sbjct: 582 RMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHV 641

Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
            +LEP D     L+  +YA  G  ++  ++R L R+       G  W++V N ++ F  G
Sbjct: 642 INLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEFRAG 701

Query: 756 GWSESYSDLLYSWLQNVPENV--------TARSSHSGLCIEEEEKEEISGIHSEKLALAF 807
             S   +  +Y+ L  +   +        T+   H    + EE KE+    HSEK+A+AF
Sbjct: 702 DTSHPLAIDIYAKLVTLIREIKDIGYVPDTSIVLHD---MSEELKEQYLLQHSEKIAVAF 758

Query: 808 ALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
            LI +S A   +RI KN+R+C  CH   KY+S     EI L DS   H  K+G CSCG+Y
Sbjct: 759 GLITTS-ATKPMRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEY 817

Query: 868 W 868
           W
Sbjct: 818 W 818



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 196/398 (49%), Gaps = 29/398 (7%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DV V   L+ ++A+ G L  A+ VF+ + ER    W+ +I  Y +     +VVELF  M+
Sbjct: 179 DVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHML 238

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG--- 206
            DG  PD +    ++ AC   G    G+ +HS+ ++LG+     V   ++ +Y K     
Sbjct: 239 DDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMER 298

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIG-ENDEAHRLFDKMCREEIKLGVVTFNILI 265
            +  AR+ F++M   + ++W ++ISGY Q G + +    LF +M  E I+   +T++ L+
Sbjct: 299 SMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLL 358

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG---RTSQALDLFKEMSFV 322
           ++   L   D   ++   +    I         ++S +A++G      +A D   E + +
Sbjct: 359 KACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNIL 418

Query: 323 GVMP-------------------NGV---TITSAISACTDLKALAMGMEIHSLAVKMGFT 360
            + P                   +GV   T  S +SA   +  L  G ++H+L++K GF 
Sbjct: 419 SMSPDVETERNNASCSSKIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFR 478

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D  + NSL++MY++C  LE A R FD +KD +V SW S+I+G  + GY  +A  +F  M
Sbjct: 479 SDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDM 538

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
             + V PN +T+  ++S     G   E  + F+ M K+
Sbjct: 539 ILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKD 576



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 145/594 (24%), Positives = 262/594 (44%), Gaps = 86/594 (14%)

Query: 63  LLQACIDSNSIHLARKLHAFL--NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM-RE 119
           LL +   +  + L R LH  L  + + + D  V   LL++Y+KCG ++ AR VF+ M   
Sbjct: 46  LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE-AGKL 178
           R+L +W+AM    +R+   RE + L   M++ GL P+ F      +AC     F  AG +
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGV 165

Query: 179 MHSLVIKLGM-SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
           +   V+K G       V  +++ ++ + G L+ A+R F+ + E+  V W  +I+ Y Q G
Sbjct: 166 VLGFVLKTGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAG 225

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD----- 292
              +   LF  M  +  +    + + +I +  +LG   +  ++      LG+  D     
Sbjct: 226 CASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSC 285

Query: 293 -----------------------------VFTWTCMISGFAQNG-RTSQALDLFKEMSFV 322
                                        V +WT +ISG+ Q+G + +  + LF+EM   
Sbjct: 286 GLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNE 345

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
            + PN +T ++ + AC +L     G +IH+  +K       +VGN+L++MY++   +E A
Sbjct: 346 SIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEA 405

Query: 383 ERVFDMIKDKDV-----------------------------YSWNSMIAGYCQAGYCGKA 413
            + FD + + ++                             +++ S+++     G   K 
Sbjct: 406 RKAFDQLYETNILSMSPDVETERNNASCSSKIEGMDDGVSTFTFASLLSAAASVGLLTKG 465

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            +L     ++    +    N L+S Y + G  ++A   F  M  +     N  SW S+I+
Sbjct: 466 QKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDH-----NVISWTSIIS 520

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
           G  + G    AL +F  M  +   PN VT ++VL AC+++    + KE       RS++ 
Sbjct: 521 GLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHF-----RSMQK 575

Query: 534 S---LPVMNS---LIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLHG 580
               LP M     ++D  A+SG +  +R   + M  K D + W +L+     +G
Sbjct: 576 DHGLLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYG 629


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 206/612 (33%), Positives = 312/612 (50%), Gaps = 85/612 (13%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+  Y++ G    A ++   M +     D  +W  MISG+ QNG  ++ALD+  EM   G
Sbjct: 35  LVHMYSRFGLVGDARKLFDDMPA----RDRGSWNAMISGYCQNGNAAEALDIADEMRLEG 90

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V  + +T+ S +  C  +  +  G  IH   +K G   ++ V N+LINMY+K   L  A+
Sbjct: 91  VKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQ 150

Query: 384 RVFDM-IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
           +VF + IKD                                     V++WN LI+GY QN
Sbjct: 151 KVFGLLIKD-------------------------------------VVSWNTLITGYAQN 173

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G   EA++++  M +++++  N  +W S++  Y  +G     +                 
Sbjct: 174 GLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGM----------------- 216

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
                              IHG V++  L S + V   LID Y K G +  + ++F  + 
Sbjct: 217 ------------------RIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAISLFYQVP 258

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            K+ + WN++I  Y +HG    AL+LF +MK+  +KP+  TF+S++ A S +G+V   + 
Sbjct: 259 RKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQW 318

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F  + E Y I P ++HY  M+DL+GR+G+LE A  FI+ MPI+PD+S W ALL ACRIH
Sbjct: 319 CFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMPIQPDASAWGALLNACRIH 378

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
           GNI+L   A ERLF+++  +V    L+  IYA  GK E    VR L R+   R + G   
Sbjct: 379 GNIELGKHASERLFEVDSENVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSS 438

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISG 797
           I + N V  F TG  +    + +Y  L+++   +         C     +EE+EKE I  
Sbjct: 439 IILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIKTIGYVPDFCFVLQDVEEDEKEHILM 498

Query: 798 IHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHH 856
            HSE+LA+A+ +I +S  P T IRI KN+R+C  CH   K++S++   EI + DS   HH
Sbjct: 499 GHSERLAIAYGIISTS--PKTPIRIFKNLRVCGDCHTVTKFISIITEREIIVRDSSRFHH 556

Query: 857 FKNGQCSCGDYW 868
           FK G CSCGDYW
Sbjct: 557 FKGGTCSCGDYW 568



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 184/381 (48%), Gaps = 37/381 (9%)

Query: 161 PKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE 220
           P +++ACG+  D   GK +H LV+KLG      V  S++ +Y + G +  AR+ F+ M  
Sbjct: 1   PPVVKACGDLLD---GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPA 57

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ------- 273
           +D  +WN+MISGY Q G   EA  + D+M  E +K+  +T   ++    Q+G        
Sbjct: 58  RDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLI 117

Query: 274 ---------------CDVAMEMVKRMESLG--------ITPDVFTWTCMISGFAQNGRTS 310
                           +  + M  +  SLG        +  DV +W  +I+G+AQNG  S
Sbjct: 118 HLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIKDVVSWNTLITGYAQNGLAS 177

Query: 311 QALDLFKEMS-FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL 369
           +A++++  M     ++PN  T  S + A + + AL  GM IH   +K     DV VG  L
Sbjct: 178 EAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCL 237

Query: 370 INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           I+MY KC +L+ A  +F  +  K+   WN+MI+ Y   G   KA ELF +M+   V P+ 
Sbjct: 238 IDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDH 297

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
           IT+  L+S    +G   +A   F  M +   +K +   +  ++  + + G+   A    +
Sbjct: 298 ITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIK 357

Query: 490 KMQSSCFYPNCVTILSVLPAC 510
           KM      P+     ++L AC
Sbjct: 358 KMP---IQPDASAWGALLNAC 375



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 215/471 (45%), Gaps = 65/471 (13%)

Query: 76  ARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
            +K+H   L L  E DVFV   L+ +Y++ G + DAR++F+DM  R+  +W+AMI  Y +
Sbjct: 13  GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARDRGSWNAMISGYCQ 72

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
           +    E +++   M  +G+  D      +L  C   GD  +GKL+H  VIK G+     V
Sbjct: 73  NGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFELFV 132

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CREE 253
            N+++ +Y K G L  A++ F  +  KD V+WN++I+GY Q G   EA  ++  M   EE
Sbjct: 133 SNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEE 191

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC--------------- 298
           I     T+  ++ +Y+ +G     M +  ++    +  DVF  TC               
Sbjct: 192 IIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDDAI 251

Query: 299 ----------------MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
                           MIS +  +G   +AL+LF+EM    V P+ +T  S +SAC+   
Sbjct: 252 SLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSHSG 311

Query: 343 ALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK----DKDVYSW 397
            ++      + +  + G    +     +++++ +  ELE A   F+ IK      D  +W
Sbjct: 312 LVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMA---FNFIKKMPIQPDASAW 368

Query: 398 NSM-----IAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLF 452
            ++     I G  + G    A E   ++   +V      + VL+S    N  + E VD  
Sbjct: 369 GALLNACRIHGNIELG--KHASERLFEVDSENV-----GYYVLLSNIYANVGKWEGVDDV 421

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           + + ++  +++N   W+S+I         NN + VF     +  +P C  I
Sbjct: 422 RSLARDRGLRKNPG-WSSIIL--------NNKVDVFYTGNQT--HPKCEEI 461



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 180/375 (48%), Gaps = 11/375 (2%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDV 91
           C NG   EA+ + D +  +G K+   T  ++L  C     I   + +H + +    E ++
Sbjct: 71  CQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHGLEFEL 130

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ- 150
           FV   L+++YAK G L  A++VF  +  +++ +W+ +I  Y+++    E +E++ LM + 
Sbjct: 131 FVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNGLASEAIEVYLLMEEH 189

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + + P+   +  IL A  + G  + G  +H  VIK  +     V   ++ +Y KCGKL  
Sbjct: 190 EEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKCGKLDD 249

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A   F  +  K+ V WN+MIS Y   G+ ++A  LF +M  E +K   +TF  L+ + + 
Sbjct: 250 AISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERVKPDHITFVSLLSACSH 309

Query: 271 LGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G    A      M E  GI P +  + CM+  F + G    A +  K+M    + P+  
Sbjct: 310 SGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAFNFIKKMP---IQPDAS 366

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
              + ++AC     + +G        ++  +++V     L N+Y+   + E  + V  + 
Sbjct: 367 AWGALLNACRIHGNIELGKHASERLFEVD-SENVGYYVLLSNIYANVGKWEGVDDVRSLA 425

Query: 390 KDKDVY---SWNSMI 401
           +D+ +     W+S+I
Sbjct: 426 RDRGLRKNPGWSSII 440



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 56/272 (20%)

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           V+ AC  L+     K+IH  VL+   E  + V  SL+  Y++ G +  +R +FD M ++D
Sbjct: 3   VVKACGDLLDG---KKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDMPARD 59

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV-- 623
             +WN++I GY  +G    ALD+ D+M+  G+K +  T  S++   +  G +  GK +  
Sbjct: 60  RGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHL 119

Query: 624 -----------------------FCSITECYQI----IPMIEHYSAMIDLYGRSGKLEEA 656
                                  F S+    ++    I  +  ++ +I  Y ++G   EA
Sbjct: 120 YVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLLIKDVVSWNTLITGYAQNGLASEA 179

Query: 657 MEFI----EDMPIEPDSSIWEALLTA----------CRIHGNIDLAVLAIERLFDLEPGD 702
           +E      E   I P+   W ++L A           RIHG +    L           D
Sbjct: 180 IEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLY---------SD 230

Query: 703 VLIQRLILQIYAICGKPEDALKV-RKLERENT 733
           V +   ++ +Y  CGK +DA+ +  ++ R+N+
Sbjct: 231 VFVGTCLIDMYGKCGKLDDAISLFYQVPRKNS 262


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  335 bits (860), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 235/782 (30%), Positives = 387/782 (49%), Gaps = 81/782 (10%)

Query: 60  YINLLQACIDSNSIHLARKLHAF--LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           +INLL  C    S+   +++HA   LN      V +   L+  YAK         +F   
Sbjct: 57  HINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQT 116

Query: 118 RE--RNLYTWSAMIGAYSRDQRWR---EVVELFFLMVQDGLFPDDFLFPKILQACGNCGD 172
            +  R  + W+ +I A+S    W    +  E +  MV+ G+  DD  FP +L+ C +  D
Sbjct: 117 FQNCRTAFLWNTLIRAHS--IAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFD 174

Query: 173 FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISG 232
              G  +H +V KLG      V N++L +Y  CG L  ARR F+ M E+D V+WN++I  
Sbjct: 175 ICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGL 234

Query: 233 YFQIGENDEAHRLF----------------------------DKMCRE----EIKLG--- 257
               G+  EA   +                            ++M R      +K+G   
Sbjct: 235 LSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDS 294

Query: 258 -VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 316
            V T N L+ +Y + G      ++        +  +  +W  +I+G A  GR   AL+ F
Sbjct: 295 QVTTCNALVDAYGKCGSVKALWQVFNET----VEKNEVSWNSIINGLACKGRCWDALNAF 350

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
           + M   G  PN VTI+S +    +L+    G EIH  +++MG   D+ + NSLI+MY+K 
Sbjct: 351 RMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKS 410

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-NVL 435
                A  +F  +  +++ SWN+MIA Y       +A    I+MQE+   PN +T+ NVL
Sbjct: 411 GHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVL 470

Query: 436 IS----GYIQNGNEDEA-----------------VDLFQRMG-----KN--DKVKRNTAS 467
            +    G++  G E  A                 +D++ + G     +N  +  +++  S
Sbjct: 471 PACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSRKDEVS 530

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           +N LI GY +      +L +F +M+     P+ V+ + V+ ACA L A  + KE+HG  L
Sbjct: 531 YNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVAL 590

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           R  L S L V NSL+D Y K G I  +  +F+ +  KD+ +WN++I GY + G    A+ 
Sbjct: 591 RNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAIS 650

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           +F+ M+   ++ +  ++++++ A S  G+V+ G + F  +    ++ P   HY+ M+DL 
Sbjct: 651 MFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEML-AQRLEPTEMHYTCMVDLL 709

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           GR+G +EEA + I+ +PI PD++IW ALL ACRI+GN++L   A E LF+L+P       
Sbjct: 710 GRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQHCGYYI 769

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
           L+  IYA  G+ ++A K+R+L +    + + G  W+++ + V+ FV     E +   L  
Sbjct: 770 LLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFVAEERVEGFE--LGD 827

Query: 768 WL 769
           WL
Sbjct: 828 WL 829



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/493 (22%), Positives = 211/493 (42%), Gaps = 51/493 (10%)

Query: 17  TKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA 76
           T + N    ++ ++ L   GR  +A+     +   GA+    T  ++L   ++       
Sbjct: 322 TVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAG 381

Query: 77  RKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           +++H F + + TE D+F+   L+ +YAK G   +A  +F ++  RN+ +W+AMI  Y+ +
Sbjct: 382 KEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALN 441

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
           +   E +     M + G  P+   F  +L AC   G    GK +H++ +++G++    V 
Sbjct: 442 RLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVS 501

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           NS++ +Y KCG L  AR  F +   KD V++N +I GY +  +  ++  LF +M     K
Sbjct: 502 NSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKK 560

Query: 256 LGVVTF-----------------------------------NILIRSYNQLGQCDVAMEM 280
             VV+F                                   N L+  Y + G+ D+A  +
Sbjct: 561 PDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRL 620

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
             ++    +  DV +W  MI G+   G    A+ +F+ M    V  + V+  + +SAC+ 
Sbjct: 621 FNQI----LFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSH 676

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNS 399
              +  G +  S  +        +    ++++  +   +E A ++   +    D   W +
Sbjct: 677 GGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGA 736

Query: 400 MIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-YIQNGNEDEAVDLFQRM 455
           ++     Y       +A E   +++     P    + +L+S  Y + G  DEA  + + M
Sbjct: 737 LLGACRIYGNVELGRRAAEHLFELK-----PQHCGYYILLSNIYAETGRWDEANKIRELM 791

Query: 456 GKNDKVKRNTASW 468
                 K    SW
Sbjct: 792 KSRGAKKNPGCSW 804


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 227/770 (29%), Positives = 386/770 (50%), Gaps = 72/770 (9%)

Query: 51  QGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VFVKTKLLSVYAKCGCLD 108
           Q    ++ T+ ++ Q C D  ++   ++ HA + ++TE    VFV   L+ +Y KC  L 
Sbjct: 36  QATPTKKKTFSHIFQECSDRKALCPGKQAHARM-ILTEFKPTVFVTNCLIQMYIKCSDLG 94

Query: 109 DAREVFEDMRERNLYTWSAMIGAYSRD------QRWRE--------VVELF-FLMVQDGL 153
            A +VF+ M +R+  +W+AM+  Y+        Q+  +        VVELF F M + G 
Sbjct: 95  FAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGT 154

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC----GKLI 209
             D   F  +L++C +  D   G  +H L +K+G  C     +++L +Y KC      L 
Sbjct: 155 VFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLR 214

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
                F+ M +K GV       G  Q+      H L       ++ +G  T ++ ++  N
Sbjct: 215 GGLELFKEM-QKAGV-------GALQL----HGHALKTDF-GTDVVIGTATLDMYMKC-N 260

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            L  C   +       SL    ++ ++  +I G+A++ +  +AL +F+ +   G+  + V
Sbjct: 261 NLSDCSNQL-----FNSLP-NHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEV 314

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           +++ A  AC  +K    G+++H L++K     ++ V N++++MY KC  L  A  VF+ +
Sbjct: 315 SLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEM 374

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT----------WNVLISGY 439
             +D  SWN++IA + Q G   K   LF+ M +S + P+  T          W  L  G 
Sbjct: 375 VSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGM 434

Query: 440 -IQN-------GNED----EAVDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLG 479
            I N       G +       +D++ + G  +K ++           SWN++I+G+    
Sbjct: 435 EIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQK 494

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
           Q   A   F KM      P+  T  ++L  CA LV     K+IH  ++++ L+S   + +
Sbjct: 495 QSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISS 554

Query: 540 SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
           +L+D Y+K GN+   + IF+   ++D +TWN+++CGY  HG    AL +F+ M+   +KP
Sbjct: 555 TLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKP 614

Query: 600 NRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEF 659
           N  TFL+++ A    G+V+ G   F S+   Y + P +EHYS ++D+ GRSG++ +A+E 
Sbjct: 615 NHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALEL 674

Query: 660 IEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKP 719
           IE MP E D+ IW  LL+ C+IHGN+++A  A   +  LEP D     L+  IYA  G  
Sbjct: 675 IEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMW 734

Query: 720 EDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
            +  K+RK+ R N  +   G  WIE+K+ V+ F+ G  +   S  +Y  L
Sbjct: 735 NEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEIYENL 784



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 154/289 (53%), Gaps = 2/289 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFV 93
           NG   + +++   +   G +    TY ++L+AC    +++   ++H   +     +D FV
Sbjct: 392 NGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFV 451

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y+KCG ++ A ++ + + E+ + +W+A+I  +S  ++  E  + F  M++ G+
Sbjct: 452 GIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGV 511

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD+F +  IL  C N    E GK +H+ +IK  +     + ++++ +Y KCG +   + 
Sbjct: 512 DPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQL 571

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            FE    +D V WN+M+ GY Q G  +EA ++F+ M  E +K    TF  ++R+   +G 
Sbjct: 572 IFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGL 631

Query: 274 CDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
            +  +     M S  G+ P +  ++C++    ++G+ S+AL+L + M F
Sbjct: 632 VEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPF 680



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 3/195 (1%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL 98
           EA      +   G      TY  +L  C +  ++ L +++HA  +    + D ++ + L+
Sbjct: 498 EAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLV 557

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +Y+KCG + D + +FE    R+  TW+AM+  Y++     E +++F  M  + + P+  
Sbjct: 558 DMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHA 617

Query: 159 LFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
            F  +L+ACG+ G  E G    HS++   G+       + V+ +  + G++  A    E 
Sbjct: 618 TFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEG 677

Query: 218 MD-EKDGVAWNSMIS 231
           M  E D V W +++S
Sbjct: 678 MPFEADAVIWRTLLS 692


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 217/738 (29%), Positives = 354/738 (47%), Gaps = 70/738 (9%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE--- 252
           N +L+ Y   G L  A+  F S   ++   W  M+  +   G   +A  LF  M  E   
Sbjct: 78  NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 137

Query: 253 -----------------------EIKLGVVTF----NILIRSYNQLGQCDVAMEMVKRME 285
                                   IK G+ T     N L+ +Y + G    A  +   M 
Sbjct: 138 PDRVTVTTVLNLPGCTVPSLHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMH 197

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
                 D  T+  M+ G ++ G  +QAL LF  M   G+     T +S ++    +  L 
Sbjct: 198 D----KDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLL 253

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
           +G ++H+L ++     +V V NSL++ YSKC+ L+   R+FD + ++D  S+N +IA Y 
Sbjct: 254 LGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYA 313

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITWNVLIS--GYIQN----------------GNED- 446
                     LF +MQ+      V+ +  ++S  G + +                 +ED 
Sbjct: 314 WNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDL 373

Query: 447 ---EAVDLFQRMGKNDKVKRNTA--------SWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
                +D++ + G  D  K N +        SW +LI GY Q GQ   AL +F  M+ + 
Sbjct: 374 LGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAG 433

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
             P+  T  S++ A + L      +++H  ++R   +SS+   + L+D YAK G +  + 
Sbjct: 434 LRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEAL 493

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
             FD M  ++ I+WN++I  Y  +G    A+ +F+ M   G  P+  TFLS++ A S  G
Sbjct: 494 RTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNG 553

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
           + D   K F  +   Y I P  EHY+ +ID  GR G   +  + + +MP + D  IW ++
Sbjct: 554 LADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSI 613

Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
           L +CRIHGN +LA +A ++LF +EP D     ++  IYA  G+ EDA  V+K+ R+   R
Sbjct: 614 LHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVR 673

Query: 736 NSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEE 790
              G  W+E+K  +Y+F +   +    D +   L  + + +  +     +      ++ E
Sbjct: 674 KESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHE 733

Query: 791 EKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLAD 850
            K E    HSE+LA+AFAL+ ++ A   IRI+KN+  C+ CH   K +S + + +I + D
Sbjct: 734 LKLESLKYHSERLAIAFALM-NTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRD 792

Query: 851 SKCLHHFKNGQCSCGDYW 868
           S+  HHFK+G CSCGDYW
Sbjct: 793 SRRFHHFKDGVCSCGDYW 810



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 210/455 (46%), Gaps = 43/455 (9%)

Query: 36  GRLNEAITVLDSIATQGA---KVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDV 91
           GR ++A+++  ++  +G    +V   T +NL    + S        LH F +    +  V
Sbjct: 119 GRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTVPS--------LHPFAIKFGLDTHV 170

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV   LL  Y K G L  AR VF +M +++  T++AM+   S++    + ++LF  M + 
Sbjct: 171 FVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRA 230

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+    F F  IL           G  +H+LV++        V NS+L  Y KC  L   
Sbjct: 231 GIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDM 290

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           RR F+ M E+D V++N +I+ Y          RLF +M +      V+ +  ++     L
Sbjct: 291 RRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSL 350

Query: 272 GQCDVAMEMVKRMESLGITPD-------------------------------VFTWTCMI 300
               +  ++  ++  LG+  +                                 +WT +I
Sbjct: 351 PDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALI 410

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +G+ QNG+  +AL LF +M   G+ P+  T +S I A + L  + +G ++HS  ++ G+ 
Sbjct: 411 TGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYK 470

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
             V  G+ L++MY+KC  L+ A R FD + +++  SWN++I+ Y   G    A ++F  M
Sbjct: 471 SSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGM 530

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
                 P+ +T+  +++    NG  DE +  F  M
Sbjct: 531 LHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLM 565



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 174/394 (44%), Gaps = 23/394 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NG+  EA+ +   +   G +  R T+ ++++A      I L R+LH++L     +  VF 
Sbjct: 416 NGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFS 475

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAKCGCLD+A   F++M ERN  +W+A+I AY+     +  +++F  M+  G 
Sbjct: 476 GSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGF 535

Query: 154 FPDDFLFPKILQACGNCG-DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  +L AC + G   E  K  H +  +  +S  +     V+    + G     +
Sbjct: 536 NPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQ 595

Query: 213 RFFESMDEK-DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           +    M  K D + W S++      G  + A    DK+   E       + IL   Y + 
Sbjct: 596 KMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGME-PTDATPYVILSNIYARA 654

Query: 272 GQCDVAMEMVKRMESLGITPDV-FTWTCM---ISGFAQNGRTSQALD--------LFKEM 319
           GQ + A  + K M   G+  +  ++W  +   I  FA N  TS  +D        L+KEM
Sbjct: 655 GQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEM 714

Query: 320 SFVGVMPNGVTITSAISACT-DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM--YSKC 376
              G  P+   IT A+     +LK  ++      LA+      +   G  +  M   + C
Sbjct: 715 DKQGYKPD---ITCALHMVDHELKLESLKYHSERLAIAFALM-NTPAGTPIRIMKNLTAC 770

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
            +  A  ++   I ++D+   +S    + + G C
Sbjct: 771 LDCHAVIKMISKIVNRDIIVRDSRRFHHFKDGVC 804


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 205/650 (31%), Positives = 333/650 (51%), Gaps = 58/650 (8%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           ++ +Y+Q+G      +    M       D+ +W  +I+ +  N    +    F+ M   G
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMP----VADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQG 56

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           + P  V I+  +SACTD + + +G  I    +  G  ++ +V  +L++MY K      A 
Sbjct: 57  INPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAA 116

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY---- 439
            VF  +  +DV +W++M+A Y + G+  +A  LF +M    V PN +T   L+SG     
Sbjct: 117 SVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVT---LVSGLDACA 173

Query: 440 -------------------IQNGN--EDEAVDLFQRMGKNDK--------VKRNTASWNS 470
                              IQ+G       V+L+ + G+ +         V++N  +W++
Sbjct: 174 SLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSA 233

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH--GCVLR 528
           + A Y +  +  +A+ V  +M      PN  T +SVL ACA + A  + + IH    VL 
Sbjct: 234 ISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLG 293

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
             LES + V+ +L++ Y+K GN+  +  +FD ++  D++ WNSLI     HG    AL+L
Sbjct: 294 GGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALEL 353

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F++M+  GL+P   TF S++ A S AGM+D G+K F S    + I P  EH+  M+DL G
Sbjct: 354 FERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLG 413

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+G + ++ + +  MP EP    W A L ACR + N+D A+ A E LF L+P       L
Sbjct: 414 RAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVL 473

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  +YA  G+  D  ++R+  +        G+ WIEVK+ V+ F++G         +++ 
Sbjct: 474 LSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAE 533

Query: 769 LQN----------VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
           LQ           VP+  T    H    +++E KE + G HSEKLA+AFAL+ + +    
Sbjct: 534 LQRLTKLMKEAGYVPD--TEMVLHD---VKQEVKEIMVGYHSEKLAMAFALLTTPEGS-P 587

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IR+VKN+R+C  CH  +K++S + + EI + D    H F+NG CSCGDYW
Sbjct: 588 IRVVKNLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 180/393 (45%), Gaps = 41/393 (10%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           +LS Y++ G +   R+ F++M   ++ +W+A+I AY  ++ +      F  M+  G+ P 
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           +      L AC +  +   G+ +   ++  G+     V+ +++++Y K G    A   F 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------C-------- 250
            M  +D VAW++M++ Y + G   EA  LF +M                  C        
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 251 ---------REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                     + I+ GVV    L+  Y + G+ + A+E   ++    +  +V  W+ + +
Sbjct: 181 GALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQI----VEKNVVAWSAISA 236

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH--SLAVKMGF 359
            +A+N R   A+ +   M   G++PN  T  S + AC  + AL  G  IH  +  +  G 
Sbjct: 237 AYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGL 296

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             DV V  +L+NMYSKC  L  A  +FD I   D+  WNS+IA   Q G   KA ELF +
Sbjct: 297 ESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFER 356

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLF 452
           M+   + P +IT+  ++      G  D+    F
Sbjct: 357 MRLEGLQPTIITFTSVLFACSHAGMLDQGRKHF 389



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 149/323 (46%), Gaps = 42/323 (13%)

Query: 63  LLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
            L AC D+  I + R +  A L    E +  V+T L+S+Y K G   DA  VF  M  R+
Sbjct: 67  FLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRD 126

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
           +  WSAM+ AY+R+   RE + LF  M  DG+ P+       L AC + GD  +G LMH 
Sbjct: 127 VVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQ 186

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
            V   G+     V  +++ +Y KCG++  A   F  + EK+ VAW+++ + Y +   N +
Sbjct: 187 RVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRD 246

Query: 242 AHRLFDKMCREEIKLGVVTF-------------------------------------NIL 264
           A R+  +M  E +     TF                                       L
Sbjct: 247 AIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTAL 306

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
           +  Y++ G   +A +M  ++  L    D+  W  +I+  AQ+G+T +AL+LF+ M   G+
Sbjct: 307 VNMYSKCGNLALAGDMFDKIAHL----DLVLWNSLIATNAQHGQTEKALELFERMRLEGL 362

Query: 325 MPNGVTITSAISACTDLKALAMG 347
            P  +T TS + AC+    L  G
Sbjct: 363 QPTIITFTSVLFACSHAGMLDQG 385



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 147/308 (47%), Gaps = 7/308 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFV 93
           NG   EA+ +   +   G    + T ++ L AC     +     +H  +     +  V V
Sbjct: 140 NGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVV 199

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+++Y KCG ++ A E F  + E+N+  WSA+  AY+R+ R R+ + +   M  +GL
Sbjct: 200 GTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLHRMDLEGL 259

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMH--SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            P+   F  +L AC      + G+ +H  + V+  G+     V  +++ +Y KCG L  A
Sbjct: 260 VPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALA 319

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
              F+ +   D V WNS+I+   Q G+ ++A  LF++M  E ++  ++TF  ++ + +  
Sbjct: 320 GDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACSHA 379

Query: 272 GQCDVAME-MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  D   +  V  +   GI P+   + CM+    + G    + DL   M F    P+ V 
Sbjct: 380 GMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSEDLLLHMPF---EPHPVA 436

Query: 331 ITSAISAC 338
             + + AC
Sbjct: 437 WMAFLGAC 444


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 205/612 (33%), Positives = 325/612 (53%), Gaps = 37/612 (6%)

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           +  W  MI+ + +NGR+ +A+D+++ M   G++P+  T +S   A +DL  +  G   H 
Sbjct: 141 IVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHG 200

Query: 353 LAVKMGF-TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
            +V +G    +V VG++L++MY+K  ++  A  V D +  KDV  + ++I GY   G  G
Sbjct: 201 QSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDG 260

Query: 412 KAYELFIKMQESDVPPNV---------------ITWNVLISGYIQNGNEDEAV------- 449
           ++ ++F  M +  +  N                +T   LI G I     + AV       
Sbjct: 261 ESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLL 320

Query: 450 DLFQRMGKNDK--------VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            ++ R G  D         +  N  +W S+I G  Q G++  AL  FR+M  S   PN  
Sbjct: 321 TMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSF 380

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           T+ SVL AC+ L    + K+IH  V++  L+    V  +LID Y K G+   +R++F+G+
Sbjct: 381 TLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGL 440

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
              D+++ NS+I  Y  +GF H AL LF  MK  GL+PN  T+L ++ A + AG+++ G 
Sbjct: 441 LEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGC 500

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
            +F S      I    +HY+ M+DL GR+G+L+EA   I  + I  D  IW  LL+ACRI
Sbjct: 501 HIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNI-SDVVIWRTLLSACRI 559

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           HG++++A   + R+ DL P D     L+  +YA  G     ++++   RE   + +    
Sbjct: 560 HGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMREMRLKKNPAMS 619

Query: 742 WIEVKNLVYTFVTGGWSE-SYSDL---LYSWLQNVPENVTARSSHSGLC-IEEEEKEEIS 796
           W++V+  ++TF+ G WS  ++ D+   L   ++ V E      +   L  ++EE+K    
Sbjct: 620 WVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQDLDEEKKIRSL 679

Query: 797 GIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHH 856
             HSEKLA+AFAL  S+    TIRI+KN+R+C  CH   K+VS +   +I   D K  HH
Sbjct: 680 YYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDIIARDVKRFHH 739

Query: 857 FKNGQCSCGDYW 868
           F+NG CSCGDYW
Sbjct: 740 FRNGLCSCGDYW 751



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 165/629 (26%), Positives = 286/629 (45%), Gaps = 96/629 (15%)

Query: 26  DTHLDFLCGNG-------RLNEAITVLDSIATQGAKVRR----------NTYINLLQACI 68
           DT  D L GN        R++     L   +    K+R+            Y +L+Q CI
Sbjct: 29  DTQADKLHGNNVLEREENRVSAFFKSLSHFSQSNIKIRKLCITETIQSTKLYSSLIQQCI 88

Query: 69  DSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAM 128
              SI    K+ +   L       +  KL+  Y KCG +  AR+VF+++  R++  W++M
Sbjct: 89  GIKSITDITKIQSHA-LKRGFHHSLGNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSM 147

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH--SLVIKL 186
           I +Y R+ R +E ++++  MV DG+ PD+F F  + +A  + G    G+  H  S+V+ +
Sbjct: 148 IASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGV 207

Query: 187 GMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF 246
           G+S V  V ++++ +Y K GK+  AR   + +  KD V + ++I GY   GE+ E+ ++F
Sbjct: 208 GVSNV-FVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVF 266

Query: 247 DKMCR--------------------EEIKLGVVTFNILIRS---------------YNQL 271
             M +                    E++  G +   +++++               Y + 
Sbjct: 267 RNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRC 326

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           G  D ++++ K+     I P+  TWT +I G  QNGR   AL  F++M    + PN  T+
Sbjct: 327 GLVDDSLKVFKQF----INPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTL 382

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           +S + AC+ L  L  G +IH++ +K G   D  VG +LI+ Y KC   E A  VF+ + +
Sbjct: 383 SSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLE 442

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
            DV S NSMI  Y Q G+  +A +LF  M+++ + PN +TW  ++S     G  +E   +
Sbjct: 443 VDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHI 502

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           F     +  ++     +  ++    + G+   A  +  ++  S    + V   ++L AC 
Sbjct: 503 FSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNIS----DVVIWRTLLSAC- 557

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
                     IHG V     E +  VMN +ID   + G    +  +   +          
Sbjct: 558 ---------RIHGDV-----EMAKRVMNRVIDLAPEDGG---THVLLSNL---------- 590

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPN 600
               Y   G W   +++   M+   LK N
Sbjct: 591 ----YASTGNWSKVIEMKSAMREMRLKKN 615



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 10/221 (4%)

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
           R +A + SL + + Q   K   L +   +QS+  Y       S++  C  + +   + +I
Sbjct: 47  RVSAFFKSL-SHFSQSNIKIRKLCITETIQSTKLYS------SLIQQCIGIKSITDITKI 99

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
               L+R    SL   N LID Y K G++VY+R +FD +  + I+ WNS+I  Y+ +G  
Sbjct: 100 QSHALKRGFHHSLG--NKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRS 157

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
             A+D++ +M   G+ P+  TF S+  A S  G+V  G++           +  +   SA
Sbjct: 158 KEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSA 217

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           ++D+Y + GK+ +A   + D  +  D  ++ AL+     HG
Sbjct: 218 LVDMYAKFGKMRDA-RLVSDQVVGKDVVLFTALIVGYSHHG 257


>gi|359493563|ref|XP_002269754.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71420-like [Vitis vinifera]
          Length = 741

 Score =  335 bits (859), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 217/659 (32%), Positives = 330/659 (50%), Gaps = 73/659 (11%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N ++  Y + G  D A +M   M       ++ +WT ++SG+AQ+GR+++   +F+ M  
Sbjct: 104 NHVVNMYAKCGSLDYAHQMFDEMPE----KNIVSWTALVSGYAQHGRSNECFRVFRGM-L 158

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK-CEELE 380
           +   P      S ISAC        G ++H+LA+K  F   V VGN+LI MY K C   +
Sbjct: 159 IWHQPTEFAFASVISACGGDDNC--GRQVHALALKTSFDSCVYVGNALIMMYCKSCGGAD 216

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-------- 432
            A  V++ +  +++ SWNSMIAG+   G   +A ELF +M    +  +  T         
Sbjct: 217 EAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLC 276

Query: 433 ----------------------------NVLISGYIQNGNE-DEAVDLFQRM-GKNDKVK 462
                                         L+  Y   G E  +   +F  + G+ D V 
Sbjct: 277 GMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVV- 335

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
               SW  +IA + +   K  AL +FR+    C  P+      VL ACA L        +
Sbjct: 336 ----SWTGIIAAFAERDPKK-ALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTV 390

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
              VL+   E  + + N+LI   A+ G++  S+ +FD M S+D ++WNS++  Y +HG  
Sbjct: 391 QSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYAMHGQG 450

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
             AL LF QM +   +P+  TF++++ A S AGM + G K+F +++  + I+P ++HY+ 
Sbjct: 451 KEALLLFSQMDA---QPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYAC 507

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           M+D+ GR+G++ EA E I+ MP+EPDS +W ALL +CR HG   LA LA  +L +L+P +
Sbjct: 508 MVDILGRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHGETKLAKLAAVKLKELDPNN 567

Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYS 762
            L   L+  I+   G+  +A  +R+       R   G  WIEV N V+ F +GG      
Sbjct: 568 SLGYVLMSNIFCTDGRFNEARLIRREMEGKIVRKEPGLSWIEVGNQVHEFASGGQQHPEK 627

Query: 763 DLLYSWLQN----------VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGS 812
           + + + L+           VP+   A        IE+E KEE    HSEKLALAFAL+  
Sbjct: 628 EAICARLEELVRRLKDLGYVPQISLALHD-----IEDEHKEEQLYYHSEKLALAFALMNV 682

Query: 813 SQ---APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
                + +TI+I+KNIR+CV CH   K  S +   EI + DS   HHFK   CSC DYW
Sbjct: 683 GSICCSGNTIKIMKNIRICVDCHNFMKLASELVDMEIVVRDSNRFHHFKAKVCSCNDYW 741



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/525 (27%), Positives = 249/525 (47%), Gaps = 55/525 (10%)

Query: 28  HLDFLCGNGRLNEAITVLDSIATQGAKVR-RNTYINLLQACIDSNSIHLARKLHAFL--- 83
           H+  LC  G L EA+ +  SI      V   +TY  L QAC   +S+   + LH  +   
Sbjct: 33  HIRLLCSRGHLQEALKLFYSITPPPPLVHSHHTYAALFQACARRSSLPEGQALHRHMFLH 92

Query: 84  NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
           N  ++ ++F+   ++++YAKCG LD A ++F++M E+N+ +W+A++  Y++  R  E   
Sbjct: 93  NPNSDFNLFLTNHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFR 152

Query: 144 LFFLMV---QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
           +F  M+   Q    P +F F  ++ ACG  GD   G+ +H+L +K        V N+++ 
Sbjct: 153 VFRGMLIWHQ----PTEFAFASVISACG--GDDNCGRQVHALALKTSFDSCVYVGNALIM 206

Query: 201 VYVK-CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
           +Y K CG    A   +E+M  ++ V+WNSMI+G+   G  + A  LF +M    I+    
Sbjct: 207 MYCKSCGGADEAWNVYEAMGFRNLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRA 266

Query: 260 TFNILIRSYNQLG---------QC-----------DVAMEMVKRMESLGIT--------- 290
           T   +      +G         QC           +VA  +VK   SLG           
Sbjct: 267 TLVSIFSCLCGMGDGLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFL 326

Query: 291 -----PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
                 DV +WT +I+ FA+     +AL +F++     + P+    +  + AC  L    
Sbjct: 327 ELDGRQDVVSWTGIIAAFAERD-PKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATER 385

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
             + + S  +K+GF DD+++ N+LI+  ++C  +  +++VFD +  +D  SWNSM+  Y 
Sbjct: 386 HALTVQSHVLKVGFEDDIVLANALIHACARCGSVALSKQVFDKMGSRDTVSWNSMLKAYA 445

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
             G   +A  LF +M   D  P+  T+  L+S     G  +E   +F+ M  N  +    
Sbjct: 446 MHGQGKEALLLFSQM---DAQPDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQL 502

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             +  ++    + GQ + A  +  KM      P+ V   ++L +C
Sbjct: 503 DHYACMVDILGRAGQISEAKELIDKMP---MEPDSVVWSALLGSC 544



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 120/516 (23%), Positives = 211/516 (40%), Gaps = 85/516 (16%)

Query: 139 REVVELFF-LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV--R 195
           +E ++LF+ +     L      +  + QAC        G+ +H  +     +    +   
Sbjct: 44  QEALKLFYSITPPPPLVHSHHTYAALFQACARRSSLPEGQALHRHMFLHNPNSDFNLFLT 103

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------ 249
           N V+ +Y KCG L +A + F+ M EK+ V+W +++SGY Q G ++E  R+F  M      
Sbjct: 104 NHVVNMYAKCGSLDYAHQMFDEMPEKNIVSWTALVSGYAQHGRSNECFRVFRGMLIWHQP 163

Query: 250 -----------CREEIKLG---------------VVTFNILIRSYNQLGQCDVAMEMVKR 283
                      C  +   G               V   N LI  Y +   C  A E    
Sbjct: 164 TEFAFASVISACGGDDNCGRQVHALALKTSFDSCVYVGNALIMMYCK--SCGGADEAWNV 221

Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA-CTDLK 342
            E++G   ++ +W  MI+GF   G  ++AL+LF +M   G+  +  T+ S  S  C    
Sbjct: 222 YEAMGFR-NLVSWNSMIAGFQVCGCGNRALELFSQMHVGGIRFDRATLVSIFSCLCGMGD 280

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC-EELEAAERVF-DMIKDKDVYSWNSM 400
            L    ++  L +K GF   + V  +L+  YS    E+    R+F ++   +DV SW  +
Sbjct: 281 GLECCFQLQCLTIKTGFILKIEVATALVKAYSSLGGEVSDCYRIFLELDGRQDVVSWTGI 340

Query: 401 IAGYCQ--------------------------------AGYCGKAYELFIKMQESDV--P 426
           IA + +                                AG   + + L ++     V   
Sbjct: 341 IAAFAERDPKKALVIFRQFLRECLAPDRHMFSIVLKACAGLATERHALTVQSHVLKVGFE 400

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALG 486
            +++  N LI    + G+   +  +F +MG      R+T SWNS++  Y   GQ   AL 
Sbjct: 401 DDIVLANALIHACARCGSVALSKQVFDKMG-----SRDTVSWNSMLKAYAMHGQGKEALL 455

Query: 487 VFRKMQSSCFYPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
           +F +M +    P+  T +++L AC++  +A    K          +   L     ++D  
Sbjct: 456 LFSQMDAQ---PDGATFVALLSACSHAGMAEEGAKIFETMSNNHGIVPQLDHYACMVDIL 512

Query: 546 AKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
            ++G I  ++ + D M    D + W++L+     HG
Sbjct: 513 GRAGQISEAKELIDKMPMEPDSVVWSALLGSCRKHG 548


>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 748

 Score =  335 bits (858), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 218/697 (31%), Positives = 359/697 (51%), Gaps = 50/697 (7%)

Query: 82  FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           F N+ T  ++     ++SV AK   + DAR++F+ M  RNL +W+ MI  Y  +    E 
Sbjct: 40  FFNM-THKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEA 98

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI-KLGMSCVRRVRNSVLA 200
            ELF +M +     D+F +  ++      G  E  + +  LV  KL  +C     N+++A
Sbjct: 99  SELFDVMPER----DNFSWALMITCYTRKGKLEKARELLELVPDKLDTACW----NAMIA 150

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
            Y K G+   A++ FE M  KD V++NSM++GY Q G+   A + F+ M        VV+
Sbjct: 151 GYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERN----VVS 206

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
           +N+++  Y + G    A ++ +++ +    P+  +W  M+ G A+ G+ ++A +LF  M 
Sbjct: 207 WNLMVAGYVKSGDLSSAWQLFEKIPN----PNAVSWVTMLCGLAKYGKMAEARELFDRMP 262

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEI-HSLAV----------KMGFTD-------- 361
              V+     I + +      +A+ +  ++ H  +V          ++G  D        
Sbjct: 263 SKNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQ 322

Query: 362 ----DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
               D+    +L++   +   ++ A+++F  I   DV  WNSMIAGY ++G   +A  LF
Sbjct: 323 MPCKDITAQTALMSGLIQNGRIDEADQMFSRIGAHDVVCWNSMIAGYSRSGRMDEALNLF 382

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
            +M       N ++WN +ISGY Q G  D A ++FQ M +     +N  SWNSLIAG+ Q
Sbjct: 383 RQMP----IKNSVSWNTMISGYAQAGQMDRATEIFQAMRE-----KNIVSWNSLIAGFLQ 433

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
                +AL     M      P+  T    L ACA L A     ++H  +L+    + L V
Sbjct: 434 NNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFV 493

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
            N+LI  YAK G +  +  +F  +   D+I+WNSLI GY L+G+ + A   F+QM S  +
Sbjct: 494 GNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISGYALNGYANKAFKAFEQMSSERV 553

Query: 598 KPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
            P+  TF+ ++ A S AG+ + G  +F  + E + I P+ EHYS ++DL GR G+LEEA 
Sbjct: 554 VPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAF 613

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICG 717
             +  M ++ ++ +W +LL ACR+H N++L   A ERLF+LEP +      +  ++A  G
Sbjct: 614 NTVRGMKVKANAGLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNYITLSNMHAEAG 673

Query: 718 KPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           + E+  +VR L R        G  WIEV+N +  F++
Sbjct: 674 RWEEVERVRMLMRGKRAGKQPGCSWIEVQNQIQHFLS 710



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 184/395 (46%), Gaps = 53/395 (13%)

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           N  I    K  ++E A R+F  +  K++ ++NSMI+   +      A +LF +M      
Sbjct: 21  NRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLR--- 77

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQ------------------RMGKNDKV------- 461
            N+++WN +I+GY+ N   +EA +LF                   R GK +K        
Sbjct: 78  -NLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGKLEKARELLELV 136

Query: 462 --KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
             K +TA WN++IAGY + GQ N+A  VF +M +     + V+  S+L         N  
Sbjct: 137 PDKLDTACWNAMIAGYAKKGQFNDAKKVFEQMPAK----DLVSYNSMLAG----YTQNGK 188

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
             +         E ++   N ++  Y KSG++  +  +F+ + + + ++W +++CG   +
Sbjct: 189 MHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNAVSWVTMLCGLAKY 248

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
           G    A +LFD+M S     N  ++ ++I  +     VD   K+F  +     +      
Sbjct: 249 GKMAEARELFDRMPS----KNVVSWNAMIATYVQDLQVDEAVKLFKKMPHKDSV-----S 299

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
           ++ +I+ Y R GKL+EA +    MP + D +   AL++    +G ID A     R   + 
Sbjct: 300 WTTIINGYIRVGKLDEARQVYNQMPCK-DITAQTALMSGLIQNGRIDEADQMFSR---IG 355

Query: 700 PGDVLIQRLILQIYAICGKPEDALKV-RKLERENT 733
             DV+    ++  Y+  G+ ++AL + R++  +N+
Sbjct: 356 AHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNS 390


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  335 bits (858), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 213/711 (29%), Positives = 352/711 (49%), Gaps = 75/711 (10%)

Query: 218 MDEKDGVA----WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
           M+E+  VA      S+++   ++   +E  RL + +     +  +     L++ Y + G 
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
            D A  + + ME      D+F W+ +IS +A+ GR   A+ L++ M   GV PN VT   
Sbjct: 61  LDDAKRVFEGME----IKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFAC 116

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
           A+  C  +  LA G  IH   +      D ++ +SL+NMY KC+E+  A +VF+ +K ++
Sbjct: 117 ALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARN 176

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESD-VPP------------------------- 427
           V S+ +MI+ Y QAG   +A ELF +M + + + P                         
Sbjct: 177 VRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVH 236

Query: 428 ----------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
                     NV+  N L++ Y + G+  EA  +F  M       RN  SW S+IA Y Q
Sbjct: 237 RHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSM-----TARNVISWTSMIAAYAQ 291

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
            G    AL +F++M      P+ V+  S L ACA L A ++ +EIH  V+   L S  P 
Sbjct: 292 HGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLAS--PQ 346

Query: 538 M-NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           M  SL+  YA+ G++  +R +F+ M ++D  + N++I  +  HG    AL ++ +M+  G
Sbjct: 347 METSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEG 406

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           +  +  TF+S+++A S   +V   +  F S+   + ++P++EHY  M+D+ GRSG+L +A
Sbjct: 407 IPADGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDA 466

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
            E +E MP + D+  W  LL+ C+ HG+++    A  ++F+L P + L    +  +YA  
Sbjct: 467 EELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAA 526

Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYS-----------DLL 765
            + +DA +VRK   E          +IE+ N ++ F +GG  E               LL
Sbjct: 527 KRFDDARRVRKEMEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLL 586

Query: 766 YSWLQN------VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT- 818
              L+       VP+         G   EEE++  +   HSE+LA+A+ LI +     + 
Sbjct: 587 LELLEPMKQAGYVPDTREVYLEQQGGTSEEEKQRSLC-FHSERLAIAYGLIAAKDPDDSR 645

Query: 819 -IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +R+V + R+C  CH   K +S +    IF+ D    HHF+ G CSCGD+W
Sbjct: 646 PLRVVNSHRVCSDCHSAIKLLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/410 (31%), Positives = 222/410 (54%), Gaps = 38/410 (9%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           +L+ AC    ++   R+LH  L +     D+ ++T LL +YAKCG LDDA+ VFE M  +
Sbjct: 15  SLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIK 74

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           +L+ WS++I AY+R  R    V L+  M+ +G+ P+   F   L  C +      G+ +H
Sbjct: 75  DLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIH 134

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
             ++   +     +++S+L +Y+KC +++ AR+ FE M  ++  ++ +MIS Y Q GE+ 
Sbjct: 135 QRILASKVPQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHA 194

Query: 241 EAHRLFDKMCR-EEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI---------- 289
           EA  LF +M + E I+    TF  ++ +   LG  +   ++ + + S G           
Sbjct: 195 EALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNAL 254

Query: 290 --------TP-------------DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
                   +P             +V +WT MI+ +AQ+G   +AL+LFK M    V P+G
Sbjct: 255 VTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMD---VEPSG 311

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
           V+ +SA++AC  L AL  G EIH   V+       +   SL++MY++C  L+ A RVF+ 
Sbjct: 312 VSFSSALNACALLGALDEGREIHHRVVEAHLASPQM-ETSLLSMYARCGSLDDARRVFNR 370

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-NVLIS 437
           +K +D +S N+MIA + Q G   +A  ++ +M++  +P + IT+ +VL++
Sbjct: 371 MKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVA 420



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 174/408 (42%), Gaps = 41/408 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           +G   EA+ +   +  + + V   ++ + L AC    ++   R++H  +         ++
Sbjct: 292 HGNPQEALNLFKRMDVEPSGV---SFSSALNACALLGALDEGREIHHRVVEAHLASPQME 348

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T LLS+YA+CG LDDAR VF  M+ R+ ++ +AMI A+++  R ++ + ++  M Q+G+ 
Sbjct: 349 TSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIP 408

Query: 155 PDDFLFPKILQAC------GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
            D   F  +L AC       +C DF       SLV+  G+  +      ++ V  + G+L
Sbjct: 409 ADGITFVSVLVACSHTSLVADCRDF-----FQSLVMDHGVVPLVEHYLCMVDVLGRSGRL 463

Query: 209 IWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
             A    E+M  + D VAW +++SG  + G+ +   R   K+  E      + +  L   
Sbjct: 464 GDAEELVETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVF-ELAPAETLPYVFLSNM 522

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG----FAQNGRTSQA----------- 312
           Y    + D A  + K ME  G+T  V      I      F   GR  Q            
Sbjct: 523 YAAAKRFDDARRVRKEMEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERV 582

Query: 313 ----LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS--LAVKMGFTDDVLVG 366
               L+L + M   G +P+   +       T  +     +  HS  LA+  G        
Sbjct: 583 RSLLLELLEPMKQAGYVPDTREVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPD 642

Query: 367 NS----LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           +S    ++N +  C +  +A ++   I +K ++  +     + + G C
Sbjct: 643 DSRPLRVVNSHRVCSDCHSAIKLLSDIIEKTIFVRDGNRFHHFEKGAC 690


>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 229/773 (29%), Positives = 388/773 (50%), Gaps = 77/773 (9%)

Query: 62  NLLQACIDSNSIHLARKLHAF--LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED--M 117
           NLLQ C   +++   +++HA+  L+      V +   L+  YA  G   ++  +F+    
Sbjct: 39  NLLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVA 98

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             R+ + W+ +I A S    + +    +  MV+ G+ PD+  +P +L+ C +  +   G+
Sbjct: 99  YSRSAFLWNTLIRANSIAGVF-DGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGR 157

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H +  KLG      V N++LA Y  CG    A + F+ M E+D V+WN++I      G
Sbjct: 158 EVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHG 217

Query: 238 ENDEAHRLFDKM--------------------CREE-------------IKLGVV----- 259
             +EA   F  M                    C E              +K+G++     
Sbjct: 218 FYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVK 277

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
             N L+  Y + G    + ++   ++      +V +W  +I+ F+  G+   ALD+F+ M
Sbjct: 278 VGNALVDVYGKCGSEKASKKVFDEIDE----RNVISWNAIITSFSFRGKYMDALDVFRLM 333

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
              G+ PN VTI+S +    +L    +GME+H  ++KM    DV + NSLI+MY+K    
Sbjct: 334 IDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSS 393

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-NVLIS- 437
             A  +F+ +  +++ SWN+MIA + +     +A EL  +MQ     PN +T+ NVL + 
Sbjct: 394 RIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPAC 453

Query: 438 ---GYIQNGNEDEA--------VDLFQRMGKNDKVK----------------RNTASWNS 470
              G++  G E  A        +DLF      D                   R+  S+N 
Sbjct: 454 ARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFNISVRDEVSYNI 513

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           LI GY +      +L +F +M+     P+ V+ + V+ ACA L    + KEIHG ++R+ 
Sbjct: 514 LIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKL 573

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
             + L V NSL+D Y + G I  +  +F  + +KD+ +WN++I GY + G    A++LF+
Sbjct: 574 FHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFE 633

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
            MK  G++ +  +F++++ A S  G+++ G+K F  + +   I P   HY+ M+DL GR+
Sbjct: 634 AMKEDGVEYDSVSFVAVLSACSHGGLIEKGRKYFKMMCD-LNIEPTHTHYACMVDLLGRA 692

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           G +EEA + I  + I PD++IW ALL ACRIHGNI+L + A E LF+L+P       L+ 
Sbjct: 693 GLMEEAADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLS 752

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
            +YA   + ++A KVR+L +    + + G  W++V +LV+ F+ G   +S  D
Sbjct: 753 NMYAEAERWDEANKVRELMKSRGAKKNPGCSWVQVGDLVHAFLVGEKIDSLDD 805



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 168/635 (26%), Positives = 300/635 (47%), Gaps = 75/635 (11%)

Query: 37  RLNEAITVLDSIATQGAKVRRN------TYINLLQACIDSNSIHLARKLHAF-LNLVTEI 89
           R N    V D   T    VR        TY  +L+ C D   +   R++H     L  + 
Sbjct: 111 RANSIAGVFDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREVHGVAFKLGFDG 170

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DVFV   LL+ Y  CG   DA +VF++M ER+  +W+ +IG  S    + E +  F +MV
Sbjct: 171 DVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFYEEALGFFRVMV 230

Query: 150 --QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRRVRNSVLAVYVKCG 206
             + G+ PD      +L  C    D    +++H   +K+G +    +V N+++ VY KCG
Sbjct: 231 AAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCG 290

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
               +++ F+ +DE++ ++WN++I+ +   G+  +A  +F  M  E ++   VT + ++ 
Sbjct: 291 SEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLP 350

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVF-------------------------------T 295
              +LG   + ME+      + I  DVF                               +
Sbjct: 351 VLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVS 410

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  MI+ FA+N    +A++L ++M   G  PN VT T+ + AC  L  L +G EIH+  +
Sbjct: 411 WNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARII 470

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           ++G + D+ V N+L +MYSKC  L  A+ VF+ I  +D  S+N +I GY +     ++  
Sbjct: 471 RVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSRTNDSLESLR 529

Query: 416 LFIKMQESDVPPNVITWNVLIS-----GYIQNGNE-----------------DEAVDLFQ 453
           LF +M+   + P+++++  ++S      +I+ G E                 +  +DL+ 
Sbjct: 530 LFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYT 589

Query: 454 RMGKND---KV-----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           R G+ D   KV      ++ ASWN++I GY   G+ + A+ +F  M+      + V+ ++
Sbjct: 590 RCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVA 649

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SK 564
           VL AC++     K ++    +   ++E +      ++D   ++G +  +  +  G+S   
Sbjct: 650 VLSACSHGGLIEKGRKYFKMMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSIIP 709

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
           D   W +L+    +HG  +  L L+     F LKP
Sbjct: 710 DTNIWGALLGACRIHG--NIELGLWAAEHLFELKP 742



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 178/356 (50%), Gaps = 10/356 (2%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL 98
           EA+ ++  +  +G      T+ N+L AC     +++ +++HA  + + + +D+FV   L 
Sbjct: 426 EAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALT 485

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +Y+KCGCL+ A+ VF ++  R+  +++ +I  YSR     E + LF  M   G+ PD  
Sbjct: 486 DMYSKCGCLNLAQNVF-NISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIV 544

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
            F  ++ AC N      GK +H L+++        V NS+L +Y +CG++  A + F  +
Sbjct: 545 SFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCI 604

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
             KD  +WN+MI GY   GE D A  LF+ M  + ++   V+F  ++ + +  G  +   
Sbjct: 605 QNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACSHGGLIEKGR 664

Query: 279 EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
           +  K M  L I P    + CM+    + G   +A DL + +S   ++P+     + + AC
Sbjct: 665 KYFKMMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLS---IIPDTNIWGALLGAC 721

Query: 339 TDLKALAMGM--EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
                + +G+    H   +K       ++   L NMY++ E  + A +V +++K +
Sbjct: 722 RIHGNIELGLWAAEHLFELKPQHCGYYIL---LSNMYAEAERWDEANKVRELMKSR 774


>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
 gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 183/533 (34%), Positives = 302/533 (56%), Gaps = 31/533 (5%)

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           D+   N ++  Y +  +L+ A  +F+ + ++D+ SWN+M++GY Q G+  +A E+F KM 
Sbjct: 25  DLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMP 84

Query: 422 ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ------------------RMGKN---DK 460
                 N I+WN L++ Y+QNG  ++A  LF+                  R  +N   + 
Sbjct: 85  ----LKNGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRKRRNLFDNM 140

Query: 461 VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
            +R++ SW+++IAGY Q G    AL  F +MQ  C   N  +    L  C+ + A    +
Sbjct: 141 PQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGR 200

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
           ++H  +++   ++   V N+L+  Y K G+I  +R  F  +  KD+++WN++I GY  HG
Sbjct: 201 QLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHG 260

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
           F   AL +F+ MK+ G++P+  T +S++ A S AG+VD G + F S+   Y I   + HY
Sbjct: 261 FGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHY 320

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
           + M+DL GR+G+LEEA   +++MP EPD++ W ALL A RIHGN +L   A + +F++EP
Sbjct: 321 TCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEP 380

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
            +  +  L+ ++YA  G+  DA K+R   R    +   G  W+EV+N ++TF  G  S  
Sbjct: 381 HNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYSWLEVQNKIHTFKVGDTSHP 440

Query: 761 YSDLLYSWLQNVPENVTARS--SHSGLC---IEEEEKEEISGIHSEKLALAFALIGSSQA 815
           ++D +Y++L+ +   +      S + L    +EEEEK  +   HSEKLA+A+ ++    A
Sbjct: 441 HTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHMLKYHSEKLAVAYGIL-YIPA 499

Query: 816 PHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              IR++KN+R+C  CH   KY+S +    I L D+   H+F+ G CSC D+W
Sbjct: 500 GRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYFEGGSCSCRDFW 552



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 166/336 (49%), Gaps = 29/336 (8%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N +L  YV+   L  AR  FE M E+D V+WN+M+SGY Q G  DEA  +F KM    +K
Sbjct: 30  NVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKM---PLK 86

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMV--------------------KRMESLGITP--DV 293
            G+ ++N L+ +Y Q G+ + A  +                     KR       P  D 
Sbjct: 87  NGI-SWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDS 145

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            +W+ MI+G++QNG + +AL  F EM       N  + T A+S C+++ AL +G ++H  
Sbjct: 146 ISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCR 205

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            VK G+     VGN+L+ MY KC  ++ A   F  I +KDV SWN+MI GY + G+  +A
Sbjct: 206 LVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEA 265

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
             +F  M+ + + P+  T   +++     G  D+  + F  M ++  +      +  ++ 
Sbjct: 266 LTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVD 325

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
              + GQ   A  + + M    F P+  T  ++L A
Sbjct: 326 LLGRAGQLEEAQNLMKNMP---FEPDAATWGALLGA 358



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 4/234 (1%)

Query: 105 GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKIL 164
           G +   R +F++M +R+  +WSAMI  YS++    E +  F  M +D    +   F   L
Sbjct: 128 GFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCAL 187

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
             C N    E G+ +H  ++K G      V N++LA+Y KCG +  AR  F+ + EKD V
Sbjct: 188 STCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVV 247

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           +WN+MI GY + G  +EA  +F+ M    I+    T   ++ + +  G  D   E    M
Sbjct: 248 SWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSM 307

Query: 285 -ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
               GIT  +  +TCM+    + G+  +A +L K M F    P+  T  + + A
Sbjct: 308 NRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFE---PDAATWGALLGA 358



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 111/487 (22%), Positives = 214/487 (43%), Gaps = 80/487 (16%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           ++   + ++   LAR L    + + E D+F    +L+ Y +   L  AR +FE M ER++
Sbjct: 1   MISGYLRNHKFDLARDL---FDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDI 57

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            +W+AM+  Y+++    E  E+F+ M       +   +  +L A    G  E  K +   
Sbjct: 58  VSWNAMLSGYAQNGFVDEAREIFYKMP----LKNGISWNGLLAAYVQNGRIEDAKRL--- 110

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
             +  M       N ++  +V+       R  F++M ++D ++W++MI+GY Q G ++EA
Sbjct: 111 -FESKMDWTLVSWNCLMGGFVRK-----RRNLFDNMPQRDSISWSAMIAGYSQNGCSEEA 164

Query: 243 HRLFDKMCREEIKLGVVTF-----------------------------------NILIRS 267
              F +M R+  +L   +F                                   N L+  
Sbjct: 165 LHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAM 224

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           Y + G  D A +  + +    +  DV +W  MI G+A++G   +AL +F+ M   G+ P+
Sbjct: 225 YCKCGSIDEARDAFQEI----LEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPD 280

Query: 328 GVTITSAISACTDLKALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
             T+ S ++AC+    +  G E  +S+    G T  ++    ++++  +  +LE A+ + 
Sbjct: 281 DATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLM 340

Query: 387 -DMIKDKDVYSWNSM-----IAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
            +M  + D  +W ++     I G  + G   KA ++  +M+    P N   + +L   Y 
Sbjct: 341 KNMPFEPDAATWGALLGASRIHGNTELG--EKAAQIIFEME----PHNSGMYILLSKLYA 394

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
            +G   +A  +   M +N  VK+        + GY  L +  N +  F+   +S  +P+ 
Sbjct: 395 ASGRWSDAGKMRLEM-RNKGVKK--------VPGYSWL-EVQNKIHTFKVGDTS--HPHT 442

Query: 501 VTILSVL 507
             I + L
Sbjct: 443 DKIYTFL 449



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 105/212 (49%), Gaps = 8/212 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NG   EA+     +     ++ R+++   L  C +  ++ L R+LH  L     +   +V
Sbjct: 158 NGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYV 217

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              LL++Y KCG +D+AR+ F+++ E+++ +W+ MI  Y+R     E + +F LM   G+
Sbjct: 218 GNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGI 277

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PDD     +L AC + G  + G +  +S+    G++        ++ +  + G+L  A+
Sbjct: 278 RPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQ 337

Query: 213 RFFESMD-EKDGVAWNSM-----ISGYFQIGE 238
              ++M  E D   W ++     I G  ++GE
Sbjct: 338 NLMKNMPFEPDAATWGALLGASRIHGNTELGE 369



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 25/153 (16%)

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
           E  L   N ++  Y ++ ++  +R +F+ M  +DI++WN+++ GY  +GF   A ++F +
Sbjct: 23  ERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYK 82

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE-------------------CYQ 632
           M    LK N  ++  ++ A+   G ++  K++F S  +                    + 
Sbjct: 83  MP---LK-NGISWNGLLAAYVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRKRRNLFD 138

Query: 633 IIPMIE--HYSAMIDLYGRSGKLEEAMEFIEDM 663
            +P  +   +SAMI  Y ++G  EEA+ F  +M
Sbjct: 139 NMPQRDSISWSAMIAGYSQNGCSEEALHFFVEM 171



 Score = 44.7 bits (104), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 45/157 (28%)

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           +I  Y ++     +R +FD M  +D+ +WN ++ GYV +     A  LF++M      P 
Sbjct: 1   MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERM------PE 54

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
           R                                   I  ++AM+  Y ++G ++EA E  
Sbjct: 55  RD----------------------------------IVSWNAMLSGYAQNGFVDEAREIF 80

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
             MP++   S W  LL A   +G I+ A    +RLF+
Sbjct: 81  YKMPLKNGIS-WNGLLAAYVQNGRIEDA----KRLFE 112


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 200/622 (32%), Positives = 327/622 (52%), Gaps = 46/622 (7%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           DV++W  +I+  A+ G + ++L  F  M  + + PN  T   AI +C+ L  L  G + H
Sbjct: 46  DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAH 105

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
             A+  GF  D+ V ++LI+MYSKC +L  A  +FD I  +++ +W S+I GY Q     
Sbjct: 106 QQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAH 165

Query: 412 KAYELFIKM---------QESDVPPNVITWNVLISG--YIQN------------------ 442
           +A  +F +          +E     + +    ++S    + N                  
Sbjct: 166 EALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDK 225

Query: 443 --GNEDEAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM- 491
             G E+  +D + + G+        +D  +++  SWNS+IA Y Q G   +A  VF  M 
Sbjct: 226 VMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGML 285

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
           ++     N VT+ ++L ACA+  A      +H  V++    +++ +  S+ID Y K G  
Sbjct: 286 KAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQA 345

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             +R  FDGM  K++ +W ++I GY +HGF   ALD+F QM   G+KPN  TF+S++ A 
Sbjct: 346 EMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAAC 405

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
           S AG ++ G + F +++  Y + P +EHY  M+DL GR+G ++EA   I+ M +  D  +
Sbjct: 406 SHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVL 465

Query: 672 WEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
           W +LL ACRIH +++LA ++   LF L+P +     L+  IYA  G+ +D  ++R L ++
Sbjct: 466 WGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDVERMRILVKD 525

Query: 732 NTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC----- 786
                  G   +E+K  V+ F+ G       + +Y +L+ +   +        +      
Sbjct: 526 RGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKLQEAGYVPNMASVLHD 585

Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
           ++EEEKE I  +HSEKLA+AF ++ S     TI ++KN+R+C  CH   K +S +   EI
Sbjct: 586 VDEEEKEMIVRVHSEKLAVAFGVMNSIPGS-TIHVIKNLRVCGDCHTVIKLISKIVSREI 644

Query: 847 FLADSKCLHHFKNGQCSCGDYW 868
            + D+K  HHFK+G CSCGDYW
Sbjct: 645 IVRDAKRFHHFKDGLCSCGDYW 666



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 204/434 (47%), Gaps = 87/434 (20%)

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           ++Y+W+++I   +R     E +  F  M +  + P+   FP  +++C    D  +GK  H
Sbjct: 46  DVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAH 105

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
              +  G      V ++++ +Y KCGKL  AR  F+ +  ++ V W S+I+GY Q   ND
Sbjct: 106 QQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQ---ND 162

Query: 241 EAH--------------------------------------RLFDKMCRE-----EIKLG 257
           +AH                                      R+ +K   E      IK+G
Sbjct: 163 DAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVG 222

Query: 258 VVTF----NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
           +       N L+ +Y + G+  ++ ++   M       DV +W  MI+ +AQNG ++ A 
Sbjct: 223 LDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAE----KDVVSWNSMIAVYAQNGLSTDAF 278

Query: 314 DLFKEMSFVGVMP-NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
           ++F  M   G    N VT+++ + AC    AL +GM +H   +KMG+ ++V++  S+I+M
Sbjct: 279 EVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDM 338

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y KC + E A   FD +K+K+V SW +MIAGY   G+  +A ++F +M  + V PN IT+
Sbjct: 339 YCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITF 398

Query: 433 NVLI-----SGYIQNG-----------NEDEA-------VDLFQRMG---------KNDK 460
             ++     +G+++ G           N +         VDL  R G         K+ K
Sbjct: 399 ISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMK 458

Query: 461 VKRNTASWNSLIAG 474
           V+R+   W SL+A 
Sbjct: 459 VRRDFVLWGSLLAA 472



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 165/340 (48%), Gaps = 50/340 (14%)

Query: 54  KVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDARE 112
           K  R+T+   +++C     ++  ++ H   L    E D+FV + L+ +Y+KCG L +AR 
Sbjct: 79  KPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARV 138

Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELF--FLMVQD-------GLFPDDFLFPKI 163
           +F+++  RN+ TW+++I  Y ++    E + +F  FL  +        G   D      +
Sbjct: 139 LFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISV 198

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG 223
           L AC    +    + +H + IK+G+  V  V N++L  Y KCG++  +R+ F+ M EKD 
Sbjct: 199 LSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDV 258

Query: 224 VAWNSMISGYFQIGENDEAHRLFDKM-------------------CREE----------- 253
           V+WNSMI+ Y Q G + +A  +F  M                   C  E           
Sbjct: 259 VSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHD 318

Query: 254 --IKLGVVTFNILIRS----YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
             IK+G V   I+  S    Y + GQ ++A      M+      +V +WT MI+G+  +G
Sbjct: 319 QVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKE----KNVRSWTAMIAGYGMHG 374

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
              +ALD+F +M + GV PN +T  S ++AC+    L  G
Sbjct: 375 FAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEG 414



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 194/439 (44%), Gaps = 73/439 (16%)

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
           F +  D  D  +WNS+I+   + G++ E+ R F  M + +IK    TF   I+S + L  
Sbjct: 38  FNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFD 97

Query: 274 CDVAMEMVKRMESLGITPDVF-------------------------------TWTCMISG 302
            +   +  ++    G   D+F                               TWT +I+G
Sbjct: 98  LNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITG 157

Query: 303 FAQNGRTSQALDLFKEMSF---------VGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
           + QN    +AL +FKE  F         VG   + V + S +SAC+ +   A+   +H +
Sbjct: 158 YVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGV 217

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
           A+K+G    + V N+L++ Y+KC E+  + +VFD + +KDV SWNSMIA Y Q G    A
Sbjct: 218 AIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDA 277

Query: 414 YELFIKMQESDVPP-NVITWNVLI---------------------SGYIQNG-NEDEAVD 450
           +E+F  M ++     N +T + L+                      GY+ N       +D
Sbjct: 278 FEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIID 337

Query: 451 LFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           ++ + G+ +  +        +N  SW ++IAGY   G    AL VF +M  +   PN +T
Sbjct: 338 MYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYIT 397

Query: 503 ILSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
            +SVL AC++        +  +      ++E  +     ++D   ++G I  +  +   M
Sbjct: 398 FISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSM 457

Query: 562 S-SKDIITWNSLICGYVLH 579
              +D + W SL+    +H
Sbjct: 458 KVRRDFVLWGSLLAACRIH 476


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 200/645 (31%), Positives = 329/645 (51%), Gaps = 75/645 (11%)

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           WT  ISG A+ GR +  +  F EM   G   PN   + + +  C  +  +  G  +H   
Sbjct: 79  WTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWM 138

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN---------------- 398
           ++ G   DV++ N++++MY+KC + E A RVF  + ++D  SWN                
Sbjct: 139 LRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGACIQSGDILGSM 198

Query: 399 ---------------SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN---------- 433
                          ++I+G  ++G+   A     +M ++ V  N  T++          
Sbjct: 199 QLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLL 258

Query: 434 -----------VLISG--------------YIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                      VLI+               Y + G  + A  +F     +   +    +W
Sbjct: 259 LPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHW--SPLTRDMNFAW 316

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           ++++AGY Q G++  AL +FR+M       +  T+ SV  ACA +    + +++HGCV +
Sbjct: 317 STMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEK 376

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
              +   P+ ++++D YAK GN+  +R+IFD   +K+I  W S++C Y  HG    A++L
Sbjct: 377 LWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIEL 436

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F++M +  + PN  T + ++ A S  G+V  G+  F  + E Y I+P IEHY+ ++DLYG
Sbjct: 437 FERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYG 496

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           RSG L++A  FIE+  I  ++ +W+ LL+ACR+H + + A LA E+L  LE  D     +
Sbjct: 497 RSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVM 556

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  IYA   K  D  ++R   +E   R   G+ WI +KN V+TFV G  S   S  +Y++
Sbjct: 557 LSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTFVAGDASHPQSAEIYAY 616

Query: 769 LQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
           L+ + E +     T+R+      +E+E++E     HSEKLA+AF +I S+ +   +RI K
Sbjct: 617 LEKLVERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAFGII-STPSGTPLRIFK 675

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+R+C  CHE  KY+S+    EI + D    HHFK+  CSC D+W
Sbjct: 676 NLRVCEDCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 128/529 (24%), Positives = 238/529 (44%), Gaps = 89/529 (16%)

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG- 152
           +  +L  + +     DAR VF++   R    W+  I   +R  R+ + +  F  M+ +G 
Sbjct: 48  RASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGE 107

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             P+ F+   +++ C   GD E+GK +H  +++ G+     + N+VL +Y KCG+   AR
Sbjct: 108 ATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERAR 167

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           R F +M E+D V+WN  I    Q G+   + +LFD    E       ++N +I    + G
Sbjct: 168 RVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFD----ESPLRDTTSWNTIISGLMRSG 223

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
               A+  ++RM   G+  + +T++   + F   G              + ++P+     
Sbjct: 224 HAADALSHLRRMAQAGVVFNHYTYS---TAFVLAG--------------MLLLPD----- 261

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD----M 388
                        +G ++H   +      D  V +SL++MY KC  LEAA  VFD    +
Sbjct: 262 -------------LGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPL 308

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-----GYIQNG 443
            +D + ++W++M+AGY Q G   +A +LF +M    V  +  T   + +     G ++ G
Sbjct: 309 TRDMN-FAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQG 367

Query: 444 NE-----------------DEAVDLFQRMGKNDKVK--------RNTASWNSLIAGYQQL 478
            +                    VD++ + G  +  +        +N A W S++  Y   
Sbjct: 368 RQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASH 427

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY--LVAS-----NKVKEIHGCVLRRSL 531
           GQ   A+ +F +M +    PN +T++ VL AC++  LV+       +++E +G V     
Sbjct: 428 GQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIV----- 482

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
             S+   N ++D Y +SG +  ++   +  + + + I W +L+    LH
Sbjct: 483 -PSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLH 530



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 141/299 (47%), Gaps = 7/299 (2%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLN 84
           +T +  L  +G   +A++ L  +A  G      TY              L R+LH   L 
Sbjct: 213 NTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLI 272

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFED----MRERNLYTWSAMIGAYSRDQRWRE 140
              E D FV++ L+ +Y KCG L+ A  VF+      R+ N + WS M+  Y ++ R  E
Sbjct: 273 AALEGDAFVRSSLMDMYCKCGLLEAAASVFDHWSPLTRDMN-FAWSTMVAGYVQNGREEE 331

Query: 141 VVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
            ++LF  M+++G+  D F    +  AC N G  E G+ +H  V KL       + ++++ 
Sbjct: 332 ALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVD 391

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y KCG L  AR  F+    K+   W SM+  Y   G+   A  LF++M  E++    +T
Sbjct: 392 MYAKCGNLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEIT 451

Query: 261 FNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
              ++ + + +G         K+M E  GI P +  + C++  + ++G   +A +  +E
Sbjct: 452 LVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEE 510



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 113/554 (20%), Positives = 211/554 (38%), Gaps = 115/554 (20%)

Query: 22  PRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKV---------RRNTYINLLQA------ 66
           P  R + L F     R ++A  V D   T+ A V         RR  Y + ++A      
Sbjct: 45  PHERASVLRFWVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLA 104

Query: 67  -----------------CIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLD 108
                            C     +   +++H + L     +DV +   +L +YAKCG  +
Sbjct: 105 EGEATPNAFVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFE 164

Query: 109 DAREVFEDMRERNLYTWSAMIGA-----------------YSRD-QRWREVVELFF---- 146
            AR VF  M ER+  +W+  IGA                   RD   W  ++        
Sbjct: 165 RARRVFGAMAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGH 224

Query: 147 ---------LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
                     M Q G+  + + +       G     + G+ +H  V+   +     VR+S
Sbjct: 225 AADALSHLRRMAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSS 284

Query: 198 VLAVYVKCGKLIWARRFFE---SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
           ++ +Y KCG L  A   F+    +      AW++M++GY Q G  +EA  LF +M RE +
Sbjct: 285 LMDMYCKCGLLEAAASVFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGV 344

Query: 255 -----------------------------------KLGVVTFNILIRSYNQLGQCDVAME 279
                                              KL     + ++  Y + G  + A  
Sbjct: 345 AADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARS 404

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           +  R      T ++  WT M+  +A +G+   A++LF+ M+   + PN +T+   +SAC+
Sbjct: 405 IFDR----ACTKNIAVWTSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACS 460

Query: 340 DLKALAMG-MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSW 397
            +  ++ G +    +  + G    +   N ++++Y +   L+ A+   +    + +   W
Sbjct: 461 HVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVW 520

Query: 398 NSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQR 454
            ++++    +    Y   A E  +++++ D    V+  N+    Y  N    +  +L   
Sbjct: 521 KTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNI----YATNNKWHDTFELRVS 576

Query: 455 MGKNDKVKRNTASW 468
           M +    K+   SW
Sbjct: 577 MQERKVRKQPGRSW 590


>gi|302791495|ref|XP_002977514.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
 gi|300154884|gb|EFJ21518.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
          Length = 673

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 210/649 (32%), Positives = 319/649 (49%), Gaps = 63/649 (9%)

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           V     LI +  + G  + A E   R+ +     +V +W  MI+   ++G  ++AL++++
Sbjct: 48  VTVATALISALARCGDLEGAREAFDRIPA----KNVVSWNSMIAALNEHGHFARALEIYR 103

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
            M   GV P+ ++   A+ +C+ L+ L  G  IH      GF   V VGN+L+NMYSKC 
Sbjct: 104 RMEPEGVKPSDISYIHALCSCSGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCR 163

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM-QESDVPPNVITW---- 432
            L+ A   F+ I  KDV SWNSMIA + Q G   +A E + +M  E  + P  IT     
Sbjct: 164 RLDLAREAFERIDSKDVVSWNSMIAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHAL 223

Query: 433 -------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
                                          + L+S   + G  D+A  +F RM      
Sbjct: 224 GAALSLRSAGDTKLLQEDAIRLGLEGDLLVGSALVSALGKCGCLDQARAVFDRM-----E 278

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
           +RN  SW+ LIA   + G+  +A+ +F +M      PN VT+LSVL ACA   A  + + 
Sbjct: 279 RRNVVSWSGLIAALAEHGRGRDAIELFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRR 338

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
            H  V     E+   V N+L++ Y K G++  +RT+FD M+ +++++W +++ GY  HG 
Sbjct: 339 THARVSGCGFEAETNVANALVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGH 398

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
              A  +F  M   G++PN  TF+S++   S AG+V  G + F  +   + I+P+ EHY 
Sbjct: 399 TEEARRVFKAMALEGIQPNVITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYG 458

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            +IDL GR+G LEEA E +  MP+EPD + W +LL AC++H + D A    +   DL   
Sbjct: 459 CVIDLLGRAGWLEEAEELLRTMPVEPDKAAWNSLLGACKVHSHTDRAKRIAKLACDL--- 515

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC--WIEVKNLVYTFVTGGWSE 759
                            P   L     + E        QC   IEVK  V+ FV G WS 
Sbjct: 516 ----------ALPFASAPYVLLSNMYTDEEQQSDPEEDQCSSLIEVKGRVHEFVAGDWSH 565

Query: 760 SYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEIS-GIHSEKLALAFALIGSSQAPHT 818
              + + + LQ + E +      S LC E  ++  +    HS KLA+AF ++ S Q   +
Sbjct: 566 PRIEEIVAELQRLQEEMMILRG-SSLCEEGGQEGSVQENEHSLKLAIAFGVLASLQGS-S 623

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
           I +V   R+CV CH+ AK +S +   +I + DS   HH + G CSCGDY
Sbjct: 624 INVVNTRRICVECHDAAKVISKIAGRKIVVRDSYRFHHIEQGVCSCGDY 672



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 236/503 (46%), Gaps = 47/503 (9%)

Query: 60  YINLLQACI----DSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           +  LL+AC      S+   LA      +    + DV V T L+S  A+CG L+ ARE F+
Sbjct: 13  FTRLLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALARCGDLEGAREAFD 72

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            +  +N+ +W++MI A +    +   +E++  M  +G+ P D  +   L +C    D E 
Sbjct: 73  RIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHALCSCSGLRDLEQ 132

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           GK +H  V   G      V N+++ +Y KC +L  AR  FE +D KD V+WNSMI+ + Q
Sbjct: 133 GKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSWNSMIAAHSQ 192

Query: 236 IGENDEAHRLFDKMCREE--------------------------------IKLG----VV 259
           +G +DEA   + +M  EE                                I+LG    ++
Sbjct: 193 LGGSDEALETYRRMIGEERLEPTKITLVHALGAALSLRSAGDTKLLQEDAIRLGLEGDLL 252

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
             + L+ +  + G  D A  +  RME      +V +W+ +I+  A++GR   A++LF  M
Sbjct: 253 VGSALVSALGKCGCLDQARAVFDRMER----RNVVSWSGLIAALAEHGRGRDAIELFHRM 308

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
              G+ PN VT+ S + AC    A+A G   H+     GF  +  V N+L+NMY KC  L
Sbjct: 309 DLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVANALVNMYGKCGHL 368

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
            +A  VFD +  ++V SW +M+AGY   G+  +A  +F  M    + PNVIT+  ++   
Sbjct: 369 GSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITFVSVLFNC 428

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
              G   + ++ F  M  +  +   T  +  +I    + G    A  + R M      P+
Sbjct: 429 SHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLRTMP---VEPD 485

Query: 500 CVTILSVLPACAYLVASNKVKEI 522
                S+L AC     +++ K I
Sbjct: 486 KAAWNSLLGACKVHSHTDRAKRI 508



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/505 (23%), Positives = 219/505 (43%), Gaps = 79/505 (15%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL---VIKLGMSCVRRVRNSVLAVYVK 204
           M  DG  P+  +F ++L+AC    +      +  +   V+  G      V  ++++   +
Sbjct: 1   MELDGCRPNAVIFTRLLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALAR 60

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--- 261
           CG L  AR  F+ +  K+ V+WNSMI+   + G    A  ++ +M  E +K   +++   
Sbjct: 61  CGDLEGAREAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHA 120

Query: 262 --------------------------------NILIRSYNQLGQCDVAMEMVKRMESLGI 289
                                           N L+  Y++  + D+A E  +R++S   
Sbjct: 121 LCSCSGLRDLEQGKSIHDRVATDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDS--- 177

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG---VMPNGVTITSAISACTDLKALAM 346
             DV +W  MI+  +Q G + +AL+ ++ M  +G   + P  +T+  A+ A   L++   
Sbjct: 178 -KDVVSWNSMIAAHSQLGGSDEALETYRRM--IGEERLEPTKITLVHALGAALSLRSAGD 234

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
              +   A+++G   D+LVG++L++   KC  L+ A  VFD ++ ++V SW+ +IA   +
Sbjct: 235 TKLLQEDAIRLGLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAE 294

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLI-----SGYIQNGNEDEA------------- 448
            G    A ELF +M    + PN +T   ++     +G I  G    A             
Sbjct: 295 HGRGRDAIELFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNV 354

Query: 449 ----VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
               V+++ + G     +        RN  SW +++AGY   G    A  VF+ M     
Sbjct: 355 ANALVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGI 414

Query: 497 YPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
            PN +T +SVL  C++  V S+ +++ H  V    +         +ID   ++G +  + 
Sbjct: 415 QPNVITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAE 474

Query: 556 TIFDGMS-SKDIITWNSLICGYVLH 579
            +   M    D   WNSL+    +H
Sbjct: 475 ELLRTMPVEPDKAAWNSLLGACKVH 499



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 143/297 (48%), Gaps = 4/297 (1%)

Query: 83  LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
           + L  E D+ V + L+S   KCGCLD AR VF+ M  RN+ +WS +I A +   R R+ +
Sbjct: 243 IRLGLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAI 302

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
           ELF  M  DG+ P++     +L+AC + G    G+  H+ V   G      V N+++ +Y
Sbjct: 303 ELFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVANALVNMY 362

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
            KCG L  AR  F++M  ++ V+W +M++GY   G  +EA R+F  M  E I+  V+TF 
Sbjct: 363 GKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITFV 422

Query: 263 ILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
            ++ + +  G     +E    M    GI P    + C+I    + G   +A +L + M  
Sbjct: 423 SVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLRTMP- 481

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
             V P+     S + AC           I  LA  +           L NMY+  E+
Sbjct: 482 --VEPDKAAWNSLLGACKVHSHTDRAKRIAKLACDLALPFASAPYVLLSNMYTDEEQ 536



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 187/407 (45%), Gaps = 36/407 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           +G    A+ +   +  +G K    +YI+ L +C     +   + +H  +     +  VFV
Sbjct: 92  HGHFARALEIYRRMEPEGVKPSDISYIHALCSCSGLRDLEQGKSIHDRVATDGFDTQVFV 151

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV-QDG 152
              L+++Y+KC  LD ARE FE +  +++ +W++MI A+S+     E +E +  M+ ++ 
Sbjct: 152 GNALVNMYSKCRRLDLAREAFERIDSKDVVSWNSMIAAHSQLGGSDEALETYRRMIGEER 211

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           L P        L A  +       KL+    I+LG+     V +++++   KCG L  AR
Sbjct: 212 LEPTKITLVHALGAALSLRSAGDTKLLQEDAIRLGLEGDLLVGSALVSALGKCGCLDQAR 271

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI------- 265
             F+ M+ ++ V+W+ +I+   + G   +A  LF +M  + I+   VT   ++       
Sbjct: 272 AVFDRMERRNVVSWSGLIAALAEHGRGRDAIELFHRMDLDGIQPNEVTLLSVLEACASTG 331

Query: 266 ------RSYNQLGQCDVAME---------MVKRMESLGITPDVF---------TWTCMIS 301
                 R++ ++  C    E         M  +   LG    VF         +WT M++
Sbjct: 332 AIAEGRRTHARVSGCGFEAETNVANALVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLA 391

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFT 360
           G+A +G T +A  +FK M+  G+ PN +T  S +  C+    ++ G+E  H +    G  
Sbjct: 392 GYAHHGHTEEARRVFKAMALEGIQPNVITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIV 451

Query: 361 DDVLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWNSMIAGYCQ 406
                   +I++  +   LE AE +   M  + D  +WNS++ G C+
Sbjct: 452 PVTEHYGCVIDLLGRAGWLEEAEELLRTMPVEPDKAAWNSLL-GACK 497



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 3/245 (1%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EID 90
           L  +GR  +AI +   +   G +    T +++L+AC  + +I   R+ HA ++    E +
Sbjct: 292 LAEHGRGRDAIELFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAE 351

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
             V   L+++Y KCG L  AR VF+ M  RN+ +W+AM+  Y+      E   +F  M  
Sbjct: 352 TNVANALVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMAL 411

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           +G+ P+   F  +L  C + G    G +  H +V   G+  V      V+ +  + G L 
Sbjct: 412 EGIQPNVITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLE 471

Query: 210 WARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
            A     +M  E D  AWNS++         D A R+    C   +      + +L   Y
Sbjct: 472 EAEELLRTMPVEPDKAAWNSLLGACKVHSHTDRAKRIAKLACDLALPFASAPYVLLSNMY 531

Query: 269 NQLGQ 273
               Q
Sbjct: 532 TDEEQ 536



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 109/217 (50%), Gaps = 14/217 (6%)

Query: 498 PNCVTILSVLPACAYLVASN---KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
           PN V    +L ACA     +   ++ EI   V+    ++ + V  +LI   A+ G++  +
Sbjct: 8   PNAVIFTRLLEACARSPEKSDRSRLAEIQFRVVATGFDADVTVATALISALARCGDLEGA 67

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           R  FD + +K++++WNS+I     HG +  AL+++ +M+  G+KP+  +++  +   S +
Sbjct: 68  REAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHALC--SCS 125

Query: 615 GMVDL--GKKVFCSI-TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
           G+ DL  GK +   + T+ +     +   +A++++Y +  +L+ A E  E +    D   
Sbjct: 126 GLRDLEQGKSIHDRVATDGFDTQVFV--GNALVNMYSKCRRLDLAREAFERID-SKDVVS 182

Query: 672 WEALLTACRIHGNIDLAVLAIERLFD---LEPGDVLI 705
           W +++ A    G  D A+    R+     LEP  + +
Sbjct: 183 WNSMIAAHSQLGGSDEALETYRRMIGEERLEPTKITL 219


>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Vitis vinifera]
          Length = 545

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 184/482 (38%), Positives = 280/482 (58%), Gaps = 5/482 (1%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+  Y + GQ   A ++  ++ +  I      W  +    A+ G   +AL  F EM   G
Sbjct: 68  LMSFYTECGQLSNARKLFDKIPNTNIR----RWIVLTGACARRGFYEEALSAFSEMQKEG 123

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           + PN   + S + AC  L     G  +H++ +K  F  D  + ++LI MYSKC  +E A 
Sbjct: 124 LRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKAC 183

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
           RVFD I DKD+   N+M++GY Q G+  +A  L  KMQ++ V PNV++WN LI+G+ Q G
Sbjct: 184 RVFDWIVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVG 243

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           ++    ++F+ M  N  V+ +  SW S+I+G+ Q    +     F++M    F P+ VTI
Sbjct: 244 DKSMVSEVFRLMTANG-VEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTI 302

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
            S+LPAC  +      KEIHG  +   +E  + V ++L+D YAK G I  ++ +F  M  
Sbjct: 303 SSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPE 362

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           ++ +TWNSLI GY  HG+ + A++LF+QM+    K +  TF +++ A S AGMV+LG+ +
Sbjct: 363 RNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESL 422

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           F  + E Y+I P +EHY+ M+DL GR+GKL EA + I+ MP+EPD  +W ALL ACR HG
Sbjct: 423 FRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHG 482

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
           NI+LA +A E LF+LEP       L+  +YA  G+  +A K++K+ ++       G  WI
Sbjct: 483 NIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWI 542

Query: 744 EV 745
           E 
Sbjct: 543 EA 544



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 145/454 (31%), Positives = 252/454 (55%), Gaps = 4/454 (0%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV-FVKTKLLSVYAKCGCLDDAREVFED 116
           +TY   +       +++  R LHA L ++    + +   KL+S Y +CG L +AR++F+ 
Sbjct: 28  DTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDK 87

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           +   N+  W  + GA +R   + E +  F  M ++GL P+ F+ P IL+ACG+  D   G
Sbjct: 88  IPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTG 147

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           + MH++++K        + ++++ +Y KCG +  A R F+ + +KD V  N+M+SGY Q 
Sbjct: 148 ENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQH 207

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
           G   EA  L  KM +  +K  VV++N LI  ++Q+G   +  E+ + M + G+ PDV +W
Sbjct: 208 GFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSW 267

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           T +ISGF QN    +  D FKEM   G  P+ VTI+S + ACT++  L  G EIH  A+ 
Sbjct: 268 TSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMV 327

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
           +G   DV V ++L++MY+KC  +  A+ +F M+ +++  +WNS+I GY   GYC +A EL
Sbjct: 328 IGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIEL 387

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F +M+ESD   + +T+  +++     G  +    LF++M +  +++     +  ++    
Sbjct: 388 FNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLG 447

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           + G+ + A  + + M      P+     ++L AC
Sbjct: 448 RAGKLSEAYDLIKAMPVE---PDKFVWGALLGAC 478


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 229/794 (28%), Positives = 382/794 (48%), Gaps = 84/794 (10%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M++ G  P+   F   +Q     GD  A  KL   +  K  +S      N+++  Y+K G
Sbjct: 33  MIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVIST-----NTMIMGYLKSG 87

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI- 265
            L  AR  F+SM ++  V W  +I GY Q     EA  LF  MCR  +    +T   L+ 
Sbjct: 88  NLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLS 147

Query: 266 -----RSYNQLGQ----------------CDVAMEMVKRMESLGITPDVF---------T 295
                 S N++ Q                C+  ++   +  SLG+   +F         T
Sbjct: 148 GFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVT 207

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           +  +++G+++ G    A++LF +M  +G  P+  T  + ++A   +  +  G ++HS  V
Sbjct: 208 FNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVV 267

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K  F  +V V N+L++ YSK + +  A ++F  + + D  S+N +I      G   ++ E
Sbjct: 268 KCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESLE 327

Query: 416 LFIKMQ-----------------------------------ESDVPPNVITWNVLISGYI 440
           LF ++Q                                    +D    V+  N L+  Y 
Sbjct: 328 LFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYA 387

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           +     EA  +F      D   +++  W +LI+GY Q G   + L +F +M  +    + 
Sbjct: 388 KCDKFGEANRIFA-----DLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADS 442

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
            T  S+L ACA L +    K++H  ++R    S++   ++L+D YAK G+I  +  +F  
Sbjct: 443 ATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQE 502

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           M  ++ ++WN+LI  Y  +G    AL  F+QM   GL+PN  +FLSI+ A S  G+V+ G
Sbjct: 503 MPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEG 562

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
            + F S+T+ Y++ P  EHY++M+D+  RSG+ +EA + +  MP EPD  +W ++L +CR
Sbjct: 563 LQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCR 622

Query: 681 IHGNIDLAVLAIERLFDLEP-GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFG 739
           IH N +LA+ A ++LF+++   D      +  IYA  G+ +   KV+K  RE   R    
Sbjct: 623 IHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRERGIRKVPA 682

Query: 740 QCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS-SHSGLC----IEEEEKEE 794
             W+E+K   + F     S   +  +   L  + + +  +       C    ++EE K E
Sbjct: 683 YSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGYKPDSTCALHNVDEEVKVE 742

Query: 795 ISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCL 854
               HSE++A+AFALI + +    I ++KN+R C  CH   K +S + + EI + DS   
Sbjct: 743 SLKYHSERIAIAFALISTPKGS-PILVMKNLRACNDCHAAIKVISKIVNREITVRDSSRF 801

Query: 855 HHFKNGQCSCGDYW 868
           HHF +G CSC DYW
Sbjct: 802 HHFTDGSCSCKDYW 815



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 165/640 (25%), Positives = 278/640 (43%), Gaps = 88/640 (13%)

Query: 64  LQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLY 123
           +Q  +    +  ARKL    + +   +V     ++  Y K G L  AR +F+ M +R++ 
Sbjct: 49  VQTHLQRGDLGAARKL---FDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMVQRSVV 105

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
           TW+ +IG Y++  R+ E   LF  M + G+ PD      +L              +H  V
Sbjct: 106 TWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHV 165

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
           +K+G      V NS+L  Y K   L  A   F+ M EKD V +N++++GY + G N +A 
Sbjct: 166 VKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAI 225

Query: 244 RLFDKMCR--------------------EEIKLG---------------VVTFNILIRSY 268
            LF KM                      ++I+ G               V   N L+  Y
Sbjct: 226 NLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFY 285

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
           ++  +   A ++   M  +    D  ++  +I+  A NGR  ++L+LF+E+ F       
Sbjct: 286 SKHDRIVEARKLFYEMPEV----DGISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQ 341

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
               + +S   +   L MG +IHS A+      +VLVGNSL++MY+KC++   A R+F  
Sbjct: 342 FPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFAD 401

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP--------------------- 427
           +  +    W ++I+GY Q G      +LF++M  + +                       
Sbjct: 402 LAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLG 461

Query: 428 --------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
                         NV + + L+  Y + G+  EA+ +FQ M       RN+ SWN+LI+
Sbjct: 462 KQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMP-----VRNSVSWNALIS 516

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLE 532
            Y Q G   +AL  F +M  S   PN V+ LS+L AC++  +    ++  +       LE
Sbjct: 517 AYAQNGDGGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLE 576

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQ 591
                  S++D   +SG    +  +   M    D I W+S++    +H     A+   DQ
Sbjct: 577 PRREHYASMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQ 636

Query: 592 MKSFGLKPNR--GTFLSIILAHSLAGMVDLGKKVFCSITE 629
           +  F +K  R    ++S+   ++ AG  D   KV  ++ E
Sbjct: 637 L--FNMKGLRDAAPYVSMSNIYAAAGEWDSVGKVKKALRE 674



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 149/581 (25%), Positives = 267/581 (45%), Gaps = 67/581 (11%)

Query: 189 SCVRRVRNSVLAVYVKCGKLIWARRFFESMD--------EKDGVAWNSMISGYFQIGEND 240
           SC R+     L      G L   +R F+ +D        + +   +N  +  + Q G+  
Sbjct: 6   SCTRKTHLHNL------GTLTSPKRHFQHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLG 59

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            A +LFD+M  +     V++ N +I  Y + G    A  +   M    +   V TWT +I
Sbjct: 60  AARKLFDEMPHK----NVISTNTMIMGYLKSGNLSTARSLFDSM----VQRSVVTWTMLI 111

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
            G+AQ+ R  +A +LF +M   G++P+ +T+ + +S  T+ +++    ++H   VK+G+ 
Sbjct: 112 GGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYD 171

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
             ++V NSL++ Y K   L  A  +F  + +KD  ++N+++ GY + G+   A  LF KM
Sbjct: 172 STLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKM 231

Query: 421 QESDVPPNVIT------------------------------WNVLISG-----YIQNGNE 445
           Q+    P+  T                              WNV ++      Y ++   
Sbjct: 232 QDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRI 291

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
            EA  LF  M + D +     S+N LI      G+   +L +FR++Q + F        +
Sbjct: 292 VEARKLFYEMPEVDGI-----SYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFAT 346

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           +L   A  +     ++IH   +     S + V NSL+D YAK      +  IF  ++ + 
Sbjct: 347 LLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQS 406

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
            + W +LI GYV  G     L LF +M    +  +  T+ SI+ A +    + LGK++  
Sbjct: 407 SVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHS 466

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
            I      +  +   SA++D+Y + G ++EA++  ++MP+  +S  W AL++A   +G+ 
Sbjct: 467 RIIRS-GCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPVR-NSVSWNALISAYAQNGDG 524

Query: 686 DLAVLAIERLFD--LEPGDVLIQRLILQIYAICGKPEDALK 724
             A+ + E++    L+P  V     IL   + CG  E+ L+
Sbjct: 525 GHALRSFEQMIHSGLQPNSVSFLS-ILCACSHCGLVEEGLQ 564


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 209/625 (33%), Positives = 324/625 (51%), Gaps = 60/625 (9%)

Query: 291 PDVFTWTC--MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
           P+  ++TC  +I G        +AL  ++EM   G++P+  T  S   +C   +  + G 
Sbjct: 49  PNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNSSEGK 105

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           +IH  + K+GF  D    N+L+NMYS C  L +A +VFD ++DK V SW +MI  + Q  
Sbjct: 106 QIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWD 165

Query: 409 YCGKAYELFIKMQESD-VPPNVITW----------------------------------- 432
              +A  LF +M +S+ V PN +T                                    
Sbjct: 166 QPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLN 225

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
            VL+  Y + G    A DLF +  +     +N  SWN +I G+ +      AL +FR+MQ
Sbjct: 226 TVLMDVYCKCGCVQLARDLFDKAQE-----KNLFSWNIMINGHVEDSNYEEALLLFREMQ 280

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
           +     + VT+ S+L AC +L A    K +H  + ++ ++  + +  +L+D YAK G+I 
Sbjct: 281 TKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIE 340

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            +  +F  M  KD++TW +LI G  + G    AL  FD+M   G+KP+  TF+ ++ A S
Sbjct: 341 TAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACS 400

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
            AG VD G   F S+++ Y I P IEHY  ++D+ GR+G++ EA E I+ MP+ PD  + 
Sbjct: 401 HAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVL 460

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
             LL ACRIHGN++ A  A ++L +++P       L+  IY    K E+A + R+L  E 
Sbjct: 461 GGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAER 520

Query: 733 TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------ 786
             R   G   IEV  +V+ FV G  S   S    S +  + E++ ++  ++G        
Sbjct: 521 GMRKPPGCSQIEVHGVVHEFVKGDSSHRQS----SEINEMLEDMISKLKNAGYVPDKSEV 576

Query: 787 ---IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHH 843
              + EEEKE    +HSEKLA+AF L+ +S     IR+VKN+R+C  CH   K +S +++
Sbjct: 577 LFDMAEEEKETELSLHSEKLAIAFGLLSTSVGT-PIRVVKNLRICSDCHSATKLISKLYN 635

Query: 844 CEIFLADSKCLHHFKNGQCSCGDYW 868
            EI + D    HHFK+G CSC  +W
Sbjct: 636 REIIVRDRNRFHHFKDGTCSCRGFW 660



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 216/459 (47%), Gaps = 48/459 (10%)

Query: 90  DVFVKTKLLSVYA--KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           D F  +K+++  +  + G L  AR VF  +     YT +++I   +     +E +  +  
Sbjct: 19  DPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQE 78

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M+  GL PD + FP + ++C N  +   GK +H    KLG +     +N+++ +Y  CG 
Sbjct: 79  MMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTKLGFASDTYAQNTLMNMYSNCGC 135

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-IKLGVVTF----- 261
           L+ AR+ F+ M++K  V+W +MI  + Q  + +EA RLFD+M + E +K   VT      
Sbjct: 136 LVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLT 195

Query: 262 ------------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITP 291
                                          +L+  Y + G   +A ++  + +      
Sbjct: 196 ACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQE----K 251

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           ++F+W  MI+G  ++    +AL LF+EM   G+  + VT+ S + ACT L AL +G  +H
Sbjct: 252 NLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLH 311

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           +   K     DV +G +L++MY+KC  +E A +VF  + +KDV +W ++I G    G   
Sbjct: 312 AYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAE 371

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
            A + F +M    V P+ IT+  +++     G  DE +  F  M     ++     +  L
Sbjct: 372 NALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGL 431

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +    + G+   A  + + M  +   P+   +  +L AC
Sbjct: 432 VDILGRAGRIAEAEELIKSMPMA---PDQFVLGGLLGAC 467



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 175/360 (48%), Gaps = 13/360 (3%)

Query: 39  NEAITVLDSI-ATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTK 96
           NEA+ + D +  ++  K    T +N+L AC  +  + + +++H +++       V + T 
Sbjct: 168 NEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTV 227

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+ VY KCGC+  AR++F+  +E+NL++W+ MI  +  D  + E + LF  M   G+  D
Sbjct: 228 LMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGD 287

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
                 +L AC + G  E GK +H+ + K  +     +  +++ +Y KCG +  A + F 
Sbjct: 288 KVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFH 347

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            M EKD + W ++I G    G+ + A + FD+M  + +K   +TF  ++ + +  G  D 
Sbjct: 348 EMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDE 407

Query: 277 AMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            +     M ++ GI P +  +  ++    + GR ++A +L K M      P+   +   +
Sbjct: 408 GISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMA---PDQFVLGGLL 464

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS---LINMYSKCEELEAAERVFDMIKDK 392
            AC     +   +E    A K     D     +   L N+Y   ++ E A+R  +++ ++
Sbjct: 465 GACR----IHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAER 520



 Score = 46.2 bits (108), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 132/316 (41%), Gaps = 35/316 (11%)

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTY---AKSGNIVYSRTIFDGMSSKDIITWNSLI 573
           +++K+IH  +LR  L    P   S I  +    +SG++ Y+R +F  + +    T NS+I
Sbjct: 2   SQLKQIHAQMLRTGLFFD-PFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSII 60

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
            G         AL  + +M   GL P+R TF S+  +   +     GK++ C  T+    
Sbjct: 61  RGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSE---GKQIHCHSTK-LGF 116

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
                  + ++++Y   G L  A +  + M  +   S W  ++    +H   D    A+ 
Sbjct: 117 ASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVS-WATMIG---VHAQWDQPNEAV- 171

Query: 694 RLFD-------LEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
           RLFD       ++P +V     ++ +   C +  D   V+++  E    + FG+  +   
Sbjct: 172 RLFDRMMKSENVKPNEV----TLVNVLTACARARDLAMVKRI-HEYIDEHGFGRHVVLNT 226

Query: 747 NLVYTFVTGGWSESYSDL--------LYSWLQNVPENVTARSSHSGLCIEEEEKEEISGI 798
            L+  +   G  +   DL        L+SW   +  +V   +    L +  E   +  GI
Sbjct: 227 VLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFRE--MQTKGI 284

Query: 799 HSEKLALAFALIGSSQ 814
             +K+ +A  L+  + 
Sbjct: 285 KGDKVTMASLLLACTH 300


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 235/844 (27%), Positives = 399/844 (47%), Gaps = 90/844 (10%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           +V++ T LL +Y   G + +A+ +F +M +RN+ +W+A++ A S +    E +  +  M 
Sbjct: 78  NVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCMEEALVAYRRMR 137

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           ++G+  +      ++  CG   D  AG  + + V+  G+     V NS++ ++    ++ 
Sbjct: 138 KEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLITMFGNLRRVQ 197

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------- 261
            A R F+ M+E+D ++WN+MIS Y       +   +   M   E+K  V T         
Sbjct: 198 DAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVTTLCSLVSVCA 257

Query: 262 ---------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
                                      N L+  Y+  G+ D A  + + M       DV 
Sbjct: 258 SSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAESLFRNMSR----RDVI 313

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGV-MPNGVTITSAISACTDLKALAMGMEIHSL 353
           +W  MIS + Q+    +AL+   ++       PN +T +SA+ AC+  +AL  G  IH++
Sbjct: 314 SWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPEALMNGRTIHAM 373

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            ++    + +L+GNSL+ MYSKC  +E  ERVF+ +   DV S N +  GY        A
Sbjct: 374 ILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSCNVLTGGYAALEDVANA 433

Query: 414 YELFIKMQESDVPPNVITW------------------------------------NVLIS 437
             +F  M+ + + PN IT                                     N LI+
Sbjct: 434 MRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLIT 493

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
            Y   G+ + +  +F R+       ++  SWN++IA   + G+   A+ +F   Q +   
Sbjct: 494 MYATCGDLESSTGIFSRINN-----KSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNK 548

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
            +   +   L + A L +  +  ++HG  ++  L+    V+N+ +D Y K G +      
Sbjct: 549 LDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKT 608

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
               + +    WN+LI GY  +G++  A D F  M S G KP+  TF++++ A S AG++
Sbjct: 609 LPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLI 668

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
           D G   + S+   + + P I+H   ++DL GR GK  EA +FI++MP+ P+  IW +LL+
Sbjct: 669 DKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMPVLPNDLIWRSLLS 728

Query: 678 ACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNS 737
           + R H N+D+   A + L +L+P D     L+  +YA   +  D  K+R    +  + N 
Sbjct: 729 SSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDVDKLRS-HMKTIKLNK 787

Query: 738 FGQC-WIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEE 791
              C W+++KN V TF  G  S  +++ +Y  L  +          A +S +    +EE+
Sbjct: 788 RPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYVADTSSALHDTDEEQ 847

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           KE     HSEKLALA+ L+   +   TIRI KN+R+C  CH   K VSM+ H EI L D 
Sbjct: 848 KEHNLWNHSEKLALAYGLLVVPEGS-TIRIFKNLRVCADCHLVFKLVSMVFHREIVLRDP 906

Query: 852 -KCL 854
            +C+
Sbjct: 907 YRCI 910



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 133/548 (24%), Positives = 237/548 (43%), Gaps = 70/548 (12%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQAC--IDSNSIHLARKLHAFLN-LVTE 88
           L  NG + EA+     +  +G     N    ++  C  ++     L    H  ++ L+T 
Sbjct: 120 LSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTH 179

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
           + V     L++++     + DA  +F+ M ER+  +W+AMI  YS ++ + +   +   M
Sbjct: 180 VSV--ANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDM 237

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
               + PD      ++  C +      G  +HSL +  G+ C   + N+++ +Y   GKL
Sbjct: 238 RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKL 297

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR-EEIKLGVVTFN----- 262
             A   F +M  +D ++WN+MIS Y Q     EA     ++ + +E     +TF+     
Sbjct: 298 DEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGA 357

Query: 263 ----------------ILIRSYNQL-----------GQCDVAMEMVKRMESLGITPDVFT 295
                           IL RS   +            +C+ +ME  +R+       DV +
Sbjct: 358 CSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCN-SMEDTERVFESMPCYDVVS 416

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL-AMGMEIHSLA 354
              +  G+A     + A+ +F  M   G+ PN +T+ +    C  L  L + GM +H+  
Sbjct: 417 CNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYV 476

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
            + G   D  + NSLI MY+ C +LE++  +F  I +K V SWN++IA   + G   +A 
Sbjct: 477 TQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAI 536

Query: 415 ELFIKMQESDVPPNVITWNVLISG----------------YIQNGNE------DEAVDLF 452
           +LF+  Q +    +       +S                  ++NG +      +  +D++
Sbjct: 537 KLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMY 596

Query: 453 QRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            + GK         D   R T  WN+LI+GY + G    A   F+ M S    P+ VT +
Sbjct: 597 GKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFV 656

Query: 505 SVLPACAY 512
           ++L AC++
Sbjct: 657 ALLSACSH 664



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 150/333 (45%), Gaps = 9/333 (2%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIH-LARKLHAFLNLVTEI-DVFVKTKLL 98
           A+ V   +   G K    T INL   C     +H     LHA++     + D ++   L+
Sbjct: 433 AMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVTQTGLLSDEYITNSLI 492

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
           ++YA CG L+ +  +F  +  +++ +W+A+I A  R  R  E ++LF      G   D F
Sbjct: 493 TMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGEEAIKLFMDSQHAGNKLDRF 552

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
              + L +  N    E G  +H L +K G+ C   V N+ + +Y KCGK+    +     
Sbjct: 553 CLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATMDMYGKCGKMDCMLKTLPDP 612

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
             +    WN++ISGY + G   EA   F  M     K   VTF  L+ + +  G  D  M
Sbjct: 613 AHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYVTFVALLSACSHAGLIDKGM 672

Query: 279 EMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
           +    M  + G++P +    C++    + G+ ++A     EM    V+PN +   S +S+
Sbjct: 673 DYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDEMP---VLPNDLIWRSLLSS 729

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDD---VLVGN 367
               K L +G +     +++   DD   VL+ N
Sbjct: 730 SRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSN 762



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 183/410 (44%), Gaps = 47/410 (11%)

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL---KALAMGMEIH 351
           +W   +SG A+ G  S A  L + M    V  +G  + S ++AC      +  A G  IH
Sbjct: 8   SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIH 67

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           +L  + G   +V +G +L+++Y     +  A+R+F  +  ++V SW +++      G   
Sbjct: 68  ALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCME 127

Query: 412 KAYELFIKMQESDVPPNV---------------------ITWNVLISGYIQN-------- 442
           +A   + +M++  V  N                      +T +V++SG + +        
Sbjct: 128 EALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLI 187

Query: 443 ---GNEDEAVD---LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
              GN     D   LF RM + D++     SWN++I+ Y      +    V   M+    
Sbjct: 188 TMFGNLRRVQDAERLFDRMEERDRI-----SWNAMISMYSHEEVYSKCFIVLSDMRHGEV 242

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            P+  T+ S++  CA          IH   +   L  S+P++N+L++ Y+ +G +  + +
Sbjct: 243 KPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKLDEAES 302

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ-MKSFGLKPNRGTFLSIILAHSLAG 615
           +F  MS +D+I+WN++I  YV       AL+   Q +++    PN  TF S + A S   
Sbjct: 303 LFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGACSSPE 362

Query: 616 MVDLGKKVFCSITE-CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
            +  G+ +   I +   Q + +I   ++++ +Y +   +E+     E MP
Sbjct: 363 ALMNGRTIHAMILQRSLQNVLLIG--NSLLTMYSKCNSMEDTERVFESMP 410



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/318 (21%), Positives = 129/318 (40%), Gaps = 39/318 (12%)

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV------ 449
           SW + ++G  + G    A+ L   M+E DVP +      L++     G ++ A       
Sbjct: 8   SWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACGAAIH 67

Query: 450 DLFQRMGKNDKV---------------------------KRNTASWNSLIAGYQQLGQKN 482
            L  R G    V                           +RN  SW +++      G   
Sbjct: 68  ALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEMPQRNVVSWTAIMVALSSNGCME 127

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
            AL  +R+M+      N   + +V+  C  L       ++   V+   L + + V NSLI
Sbjct: 128 EALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVSVANSLI 187

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
             +     +  +  +FD M  +D I+WN++I  Y     +     +   M+   +KP+  
Sbjct: 188 TMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMRHGEVKPDVT 247

Query: 603 TFLSIILAHSLAGMVDLGKKV--FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
           T  S++   + + +V LG  +   C  +  +  +P+I   +A++++Y  +GKL+EA    
Sbjct: 248 TLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLI---NALVNMYSTAGKLDEAESLF 304

Query: 661 EDMPIEPDSSIWEALLTA 678
            +M    D   W  ++++
Sbjct: 305 RNMS-RRDVISWNTMISS 321


>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 229/784 (29%), Positives = 386/784 (49%), Gaps = 99/784 (12%)

Query: 58  NTYINL-LQACIDSNSIHLARKLHAFLNLVTEID-VFVKTKLLSVYAKCGCLDDAREVFE 115
           NT + L L+AC   N++   + +H  +     +D V V T ++  Y KCG ++DAR VF+
Sbjct: 60  NTTLPLVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFD 119

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            M +R++  W+AM+  Y     + E + L   M ++ L P+      +L AC    +   
Sbjct: 120 AMSDRDVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRL 179

Query: 176 GKLMHSLVIKLGM-SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
           G+ +H   ++ GM      V  +++  Y++    +     F+ M  ++ V+WN+MISGY+
Sbjct: 180 GRGVHGYCLRNGMFDSNPHVATALIGFYLRFDMRVLP-LLFDLMVVRNIVSWNAMISGYY 238

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG---------QCDVAMEMVKRME 285
            +G+  +A  LF +M  +E+K   VT  + +++  +LG         Q  +  E V+ + 
Sbjct: 239 DVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLY 298

Query: 286 SLGITPDVFT----------------------WTCMISGFAQNGRTSQALDLFKEMSFVG 323
            L    ++++                      W  MIS +A  G   +A+DLF  M   G
Sbjct: 299 ILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEG 358

Query: 324 VMPNGVTITSAISACTDLKA-LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           V  +  T+   +S C +L + L  G  +H+  +K G   D  +GN+L++MY++   +E+ 
Sbjct: 359 VKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESV 418

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT----------- 431
           +++FD +K  D+ SWN+MI    +     +A ELF +M+ES++ PN  T           
Sbjct: 419 QKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDV 478

Query: 432 ----WNVLISGYIQN--------------------GNEDEAVDLFQRMGKNDKVKRNTAS 467
               +   I GY+                      G+E  A DLF+  G  D   R+  S
Sbjct: 479 TCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATARDLFE--GCPD---RDLIS 533

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           WN++I   +                     PN VTI++VL +  +L    + + +H  V 
Sbjct: 534 WNAMIXKAE---------------------PNSVTIINVLSSFTHLATLPQGQSLHAYVT 572

Query: 528 RR--SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
           RR  SL   L + N+ I  YA+ G++  +  IF  +  ++II+WN++I GY ++G    A
Sbjct: 573 RRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAMIAGYGMNGRGSDA 632

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           +  F QM   G +PN  TF+S++ A S +G +++G ++F S+ + + + P + HYS ++D
Sbjct: 633 MLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFNVTPELVHYSCIVD 692

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           L  R G ++EA EFI+ MPIEPD+S+W ALL++CR + +   A    E+L  LEP +   
Sbjct: 693 LLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIFEKLDKLEPMNAGN 752

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
             L+  +YA  G   +  ++R   +E   R   G  WI VKN V+ F  G  S   SD +
Sbjct: 753 YVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCFSAGDRSHPQSDKI 812

Query: 766 YSWL 769
           Y+ L
Sbjct: 813 YAKL 816



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 164/643 (25%), Positives = 283/643 (44%), Gaps = 75/643 (11%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDV 91
           G G   EA+ ++  +  +  +    T + LL AC  ++ + L R +H +   N + + + 
Sbjct: 138 GWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNP 197

Query: 92  FVKTKLLSVYAKCGCLDDARE---VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            V T L+  Y +     D R    +F+ M  RN+ +W+AMI  Y     + + +ELF  M
Sbjct: 198 HVATALIGFYLRF----DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQM 253

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           + D +  D       +QAC   G  + GK +H L IK        + N++L +Y   G L
Sbjct: 254 LVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSL 313

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------- 261
             + + FES+  +D   WNSMIS Y   G ++EA  LF +M  E +K    T        
Sbjct: 314 ESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMC 373

Query: 262 -----------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
                                        N L+  Y +L   +   ++  RM+ +    D
Sbjct: 374 EELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGV----D 429

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           + +W  MI   A+N   +QA +LF+ M    + PN  TI S ++AC D+  L  G  IH 
Sbjct: 430 IISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHG 489

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA---------- 402
             +K     +  +  +L +MY  C +   A  +F+   D+D+ SWN+MI           
Sbjct: 490 YVMKHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIXKAEPNSVTII 549

Query: 403 ------GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMG 456
                  +      G++   ++  +   +  ++   N  I+ Y + G+   A ++F+ + 
Sbjct: 550 NVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLP 609

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL-VA 515
                KRN  SWN++IAGY   G+ ++A+  F +M    F PN VT +SVL AC++    
Sbjct: 610 -----KRNIISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFI 664

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLIC 574
              ++  H  V   ++   L   + ++D  A+ G I  +R   D M    D   W +L+ 
Sbjct: 665 EMGLQLFHSMVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLS 724

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSLAGM 616
               +     A  +F+++    L+P N G ++ +   ++ AG+
Sbjct: 725 SCRAYSDAKQAKTIFEKLDK--LEPMNAGNYVLLSNVYATAGL 765



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 178/383 (46%), Gaps = 37/383 (9%)

Query: 284 MESLGITP------DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
           ++ L ++P      D   W  +I   A        L  + +M  +GV+PN  T+   + A
Sbjct: 10  LQRLTLSPTKIQIKDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKA 69

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C    A+  G  IH         DDV VG ++++ Y KC  +E A  VFD + D+DV  W
Sbjct: 70  CAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLW 129

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL---------------ISGY-IQ 441
           N+M+ GY   G   +A  L  +M   ++ PN  T   L               + GY ++
Sbjct: 130 NAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLR 189

Query: 442 NG----NEDEAVDLFQRMGKND----------KVKRNTASWNSLIAGYQQLGQKNNALGV 487
           NG    N   A  L     + D           V RN  SWN++I+GY  +G    AL +
Sbjct: 190 NGMFDSNPHVATALIGFYLRFDMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALEL 249

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           F +M       +CVT+L  + ACA L +    K+IH   ++      L ++N+L++ Y+ 
Sbjct: 250 FVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSN 309

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
           +G++  S  +F+ + ++D   WNS+I  Y   G    A+DLF +M+S G+K +  T + +
Sbjct: 310 NGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIM 369

Query: 608 I-LAHSLAGMVDLGKKVFCSITE 629
           + +   LA  +  GK +   + +
Sbjct: 370 LSMCEELASGLLKGKSLHAHVIK 392



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 4/189 (2%)

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
           ++   WNS+I     L      L  + +M+S    PN  T+  VL ACA   A  + K I
Sbjct: 23  KDPKHWNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSI 82

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           H  +    L   + V  +++D Y K G +  +R +FD MS +D++ WN+++ GYV  G +
Sbjct: 83  HRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCY 142

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV--FCSITECYQIIPMIEHY 640
             A+ L  +M    L+PN  T ++++LA   A  + LG+ V  +C     +   P +   
Sbjct: 143 EEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVA-- 200

Query: 641 SAMIDLYGR 649
           +A+I  Y R
Sbjct: 201 TALIGFYLR 209


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 206/657 (31%), Positives = 326/657 (49%), Gaps = 79/657 (12%)

Query: 186 LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRL 245
           +G +    V +S++ +Y + G +  ARR F+ M  KD V WN M++G+ + GE + A ++
Sbjct: 1   MGFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKV 60

Query: 246 FDKMCREEIKLGVVTF-----------------------------------NILIRSYNQ 270
           F+ M   + K   +TF                                   N L+  Y++
Sbjct: 61  FEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSK 120

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            GQ   A+++   M       +V TW  MI+GF QNG   +A  LF EM   GV P+ +T
Sbjct: 121 FGQLSDALKLFNTMPDT----NVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSIT 176

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
             S + + T+  +L  G EIH   ++ G   DV + ++LI++Y KC ++  A ++F    
Sbjct: 177 FASFLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQST 236

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------------ 432
           + D+    ++I+GY   G    A E+F  + E  + PN +T                   
Sbjct: 237 NVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKE 296

Query: 433 ---NVLISG--------------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
              N+L  G              Y + G  D A  +F+RM + D V      WN++I   
Sbjct: 297 LHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAV-----CWNAIITNC 351

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
            Q G+   A+ +FR+M       +CV+I + L ACA L A +  K IH  +++ + +S +
Sbjct: 352 SQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEV 411

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
              ++LID Y K GN+  +R +FD M  K+ ++WNS+I  Y  HG    +L LF +M   
Sbjct: 412 FAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLED 471

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           G++P+  TFL+I+ A   AG VD G + F  +TE Y I   +EHY+ ++DL+GR+G+L E
Sbjct: 472 GIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNE 531

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A E I++MP  PD  +W  LL ACR+HGN++LA +A   L DL+P +     L+  ++A 
Sbjct: 532 AFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHAD 591

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
            G+     K+R L ++   +   G  WIEV    + FV    S   S  +YS L N+
Sbjct: 592 AGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNL 648



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 148/289 (51%), Gaps = 2/289 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG  N+A+ +   +  +       T  ++L AC    +++L ++LHA  L    +    V
Sbjct: 253 NGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHV 312

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + ++ +YAKCG LD A ++F  M E++   W+A+I   S++ + +E ++LF  M ++GL
Sbjct: 313 GSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGL 372

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             D       L AC N      GK +HS +IK          ++++ +Y KCG L  AR 
Sbjct: 373 SYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARC 432

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M EK+ V+WNS+I+ Y   G  + +  LF KM  + I+   VTF  ++ +    GQ
Sbjct: 433 VFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQ 492

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
            D  ++  + M E  GI   +  + C++  F + GR ++A +  K M F
Sbjct: 493 VDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPF 541



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 95/437 (21%), Positives = 178/437 (40%), Gaps = 97/437 (22%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG ++EA  +   + + G      T+ + L +  +S S+   +++H + L     +DVF+
Sbjct: 152 NGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRHGIALDVFL 211

Query: 94  KTKLLSVYAKC-------------------------------GCLDDAREVFEDMRERNL 122
           K+ L+ +Y KC                               G  +DA E+F        
Sbjct: 212 KSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIF-------- 263

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
                         RW         ++++ + P+      +L AC        GK +H+ 
Sbjct: 264 --------------RW---------LLEEKMSPNAVTLASVLPACAGLATLNLGKELHAN 300

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           ++K G+   R V ++++ +Y KCG+L  A + F  M EKD V WN++I+   Q G+  EA
Sbjct: 301 ILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEA 360

Query: 243 HRLFDKMCREEIKLGVVTFNI---------------LIRSYNQLGQCD-------VAMEM 280
             LF +M RE +    V+ +                 I S+   G  D         ++M
Sbjct: 361 IDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDM 420

Query: 281 VKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
             +  +L +   VF         +W  +I+ +  +G    +L LF +M   G+ P+ VT 
Sbjct: 421 YGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTF 480

Query: 332 TSAISACTDLKALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMI 389
            + +SAC     +  G++    +  + G    +     +++++ +   L EA E + +M 
Sbjct: 481 LTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMP 540

Query: 390 KDKDVYSWNSMIAGYCQ 406
              D   W +++ G C+
Sbjct: 541 FSPDDGVWGTLL-GACR 556


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 230/805 (28%), Positives = 391/805 (48%), Gaps = 84/805 (10%)

Query: 130 GAYSRDQRW--REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
            AY+   +W   E+  L  L    G+  D F   + LQ C   GD   G+ +H  V++ G
Sbjct: 32  AAYAAALQWLEDELTSLAILPSVPGV--DSFACARQLQGCIARGDARGGRAVHGHVVRRG 89

Query: 188 MSCVRRV----RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
              V R+     N +L +Y K G L  ARR F+ M E++ V++ +++  + Q G+ + A 
Sbjct: 90  --GVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAA 147

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
            LF ++  E  ++       +++    +    +A  +      LG   + F  + +I  +
Sbjct: 148 ALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAY 207

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS----------------ACTDLKALAMG 347
           +     S A  +F  +    V  + V  T+ +S                +C+ L      
Sbjct: 208 SLCSLVSDAEHVFNGI----VRKDAVVWTAMVSCYSENDCPENAFRCAQSCSLLAISCAR 263

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
             IH  A+K     +  VG +L++MY+KC +++ A   F+MI   DV   + MI+ Y Q+
Sbjct: 264 QGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQS 323

Query: 408 GYCGKAYELFIKMQESDVPPN-----------------------------------VITW 432
               +A+ELF+++  S V PN                                   +   
Sbjct: 324 NQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVG 383

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           N L+  Y +  + D ++ +F  +   ++V     SWN+++ G+ Q G    AL VF +MQ
Sbjct: 384 NALMDFYAKCNDMDSSLKIFSSLRDANEV-----SWNTIVVGFSQSGLGEEALSVFCEMQ 438

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
           ++      VT  SVL ACA   +     +IH  + + +  +   + NSLIDTYAK G I 
Sbjct: 439 AAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIR 498

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            +  +F  +  +DII+WN++I GY LHG    AL+LFD+M    ++ N  TF++++    
Sbjct: 499 DALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCC 558

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
             G+V+ G  +F S+   + I P +EHY+ ++ L GR+G+L +A++FI D+P  P + +W
Sbjct: 559 STGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVW 618

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
            ALL++C IH N+ L   + E++ ++EP D     L+  +YA  G  +    +RK  R  
Sbjct: 619 RALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNI 678

Query: 733 TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------ 786
             R   G  W+E+K  ++ F  G  S  + D+    +  + E +  ++S  G        
Sbjct: 679 GVRKVPGLSWVEIKGEIHAFSVG--SVDHPDMRV--INAMLEWLNLKTSREGYIPDINVV 734

Query: 787 ---IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHH 843
              +++E+K  +  +HSE+LALA+ L+ +    H IRI+KN+R C+ CH     +S +  
Sbjct: 735 LHDVDKEQKTRMLWVHSERLALAYGLVMTPPG-HPIRILKNLRSCLDCHTAFTVISKIVK 793

Query: 844 CEIFLADSKCLHHFKNGQCSCGDYW 868
            EI + D    HHF++G+CSCGDYW
Sbjct: 794 REIIVRDINRFHHFEDGKCSCGDYW 818



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 154/625 (24%), Positives = 279/625 (44%), Gaps = 94/625 (15%)

Query: 64  LQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           LQ CI        R +H  +     V  +D+F    LL++Y K G L  AR +F+ M ER
Sbjct: 66  LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           N+ ++  ++ A+++   +     LF  +  +G   + F+   +L+             +H
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
           S   KLG      V + ++  Y  C  +  A   F  +  KD V W +M+S Y    END
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCY---SEND 242

Query: 241 EAHRLFDKMCREEIKL-------------GVVTFN--------ILIRSYNQLG---QCDV 276
                F   C +   L              + T N         L+  Y + G      +
Sbjct: 243 CPENAF--RCAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARL 300

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
           A EM+          DV   + MIS +AQ+ +  QA +LF  +    V+PN  +++S + 
Sbjct: 301 AFEMIP-------YDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQ 353

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           ACT++  L  G +IH+ A+K+G   D+ VGN+L++ Y+KC +++++ ++F  ++D +  S
Sbjct: 354 ACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVS 413

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------------------ 432
           WN+++ G+ Q+G   +A  +F +MQ + +P   +T+                        
Sbjct: 414 WNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIE 473

Query: 433 -----------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK 481
                      N LI  Y + G   +A+ +FQ +     ++R+  SWN++I+GY   GQ 
Sbjct: 474 KSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-----MERDIISWNAIISGYALHGQA 528

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL------ESSL 535
            +AL +F +M  S    N +T +++L  C      N     HG  L  S+      + S+
Sbjct: 529 ADALELFDRMNKSNVESNDITFVALLSVCCSTGLVN-----HGLSLFDSMRIDHGIKPSM 583

Query: 536 PVMNSLIDTYAKSGNIVYS-RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
                ++    ++G +  + + I D  S+   + W +L+   ++H   + AL  F   K 
Sbjct: 584 EHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHK--NVALGRFSAEKI 641

Query: 595 FGLKP-NRGTFLSIILAHSLAGMVD 618
             ++P +  T++ +   ++ AG +D
Sbjct: 642 LEIEPQDETTYVLLSNMYAAAGSLD 666



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/507 (23%), Positives = 224/507 (44%), Gaps = 54/507 (10%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           G    A  +   +  +G +V +     +L+  I  ++  LA  +H+    L  + + FV 
Sbjct: 141 GDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVG 200

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           + L+  Y+ C  + DA  VF  +  ++   W+AM+  YS +                   
Sbjct: 201 SGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSEND-----------------C 243

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P++    +  Q+C       A + +H   IK        V  ++L +Y KCG +  AR  
Sbjct: 244 PENAF--RCAQSCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLA 301

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           FE +   D +  + MIS Y Q  +N++A  LF ++ R  +     + + ++++   + Q 
Sbjct: 302 FEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQL 361

Query: 275 DVAMEMVKRMESLGITPDVF-------------------------------TWTCMISGF 303
           D   ++      +G   D+F                               +W  ++ GF
Sbjct: 362 DFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGF 421

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
           +Q+G   +AL +F EM    +    VT +S + AC    ++    +IH    K  F +D 
Sbjct: 422 SQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDT 481

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
           ++GNSLI+ Y+KC  +  A +VF  + ++D+ SWN++I+GY   G    A ELF +M +S
Sbjct: 482 VIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKS 541

Query: 424 DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
           +V  N IT+  L+S     G  +  + LF  M  +  +K +   +  ++    + G+ N+
Sbjct: 542 NVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLND 601

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPAC 510
           AL     + S+   P+ +   ++L +C
Sbjct: 602 ALQFIGDIPSA---PSAMVWRALLSSC 625



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/415 (22%), Positives = 186/415 (44%), Gaps = 37/415 (8%)

Query: 83  LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
           +  + + +  V   LL +YAKCG + DAR  FE +   ++   S MI  Y++  +  +  
Sbjct: 271 IKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAF 330

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
           ELF  +++  + P+++    +LQAC N    + GK +H+  IK+G      V N+++  Y
Sbjct: 331 ELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFY 390

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
            KC  +  + + F S+ + + V+WN+++ G+ Q G  +EA  +F +M   ++    VT++
Sbjct: 391 AKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYS 450

Query: 263 ILIR------SYNQLGQ--------------------------CDVAMEMVKRMESLGIT 290
            ++R      S    GQ                          C    + +K  + L + 
Sbjct: 451 SVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-ME 509

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
            D+ +W  +ISG+A +G+ + AL+LF  M+   V  N +T  + +S C     +  G+ +
Sbjct: 510 RDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSL 569

Query: 351 -HSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
             S+ +  G    +     ++ +  +   L +A + + D+        W ++++      
Sbjct: 570 FDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCII-- 627

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
           +   A   F   +  ++ P   T  VL+S         + V L ++  +N  V++
Sbjct: 628 HKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRK 682



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 4/258 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           +G   EA++V   +        + TY ++L+AC  + SI  A ++H  +   T   D  +
Sbjct: 424 SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVI 483

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+  YAKCG + DA +VF+ + ER++ +W+A+I  Y+   +  + +ELF  M +  +
Sbjct: 484 GNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNV 543

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             +D  F  +L  C + G    G  L  S+ I  G+         ++ +  + G+L  A 
Sbjct: 544 ESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDAL 603

Query: 213 RFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           +F   +      + W +++S    I +N    R   +   E       T+ +L   Y   
Sbjct: 604 QFIGDIPSAPSAMVWRALLSSCI-IHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAA 662

Query: 272 GQCDVAMEMVKRMESLGI 289
           G  D    + K M ++G+
Sbjct: 663 GSLDQVALLRKSMRNIGV 680


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 184/482 (38%), Positives = 281/482 (58%), Gaps = 5/482 (1%)

Query: 264  LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
            L+  Y + GQ   A ++  ++ +  I      W  +    A+ G   +AL  F EM   G
Sbjct: 844  LMSFYTECGQLSNARKLFDKIPNTNIR----RWIVLTGACARRGFYEEALSAFSEMQKEG 899

Query: 324  VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
            + PN   + S + AC  L     G  +H++ +K  F  D  + ++LI MYSKC  +E A 
Sbjct: 900  LRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKAC 959

Query: 384  RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
            RVFD I DKD+   N+M++GY Q G+  +A +L  KMQ++ V PNV++WN LI+G+ Q G
Sbjct: 960  RVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVG 1019

Query: 444  NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
            ++    ++F+ M  N  V+ +  SW S+I+G+ Q    +     F++M    F P+ VTI
Sbjct: 1020 DKSMVSEVFRLMTANG-VEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTI 1078

Query: 504  LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
             S+LPAC  +      KEIHG  +   +E  + V ++L+D YAK G I  ++ +F  M  
Sbjct: 1079 SSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPE 1138

Query: 564  KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
            ++ +TWNSLI GY  HG+ + A++LF+QM+    K +  TF +++ A S AGMV+LG+ +
Sbjct: 1139 RNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESL 1198

Query: 624  FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
            F  + E Y+I P +EHY+ M+DL GR+GKL EA + I+ MP+EPD  +W ALL ACR HG
Sbjct: 1199 FXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHG 1258

Query: 684  NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
            NI+LA +A E LF+LEP       L+  +YA  G+  +A K++K+ ++       G  WI
Sbjct: 1259 NIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWI 1318

Query: 744  EV 745
            E 
Sbjct: 1319 EA 1320



 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 192/621 (30%), Positives = 319/621 (51%), Gaps = 59/621 (9%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           LI  Y + G+ D A+ +  +M SL    D  T  C+IS +A+NG   QA  +F ++  +G
Sbjct: 154 LIDMYAKCGEVDSAVRVYDKMTSL----DAATCNCLISAYARNGFFVQAFQVFMQIGNMG 209

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
             PN  T ++ ++ C  + A+  G ++H+  VKM +  +  VGN+L+ +YSKC  +E AE
Sbjct: 210 TRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAE 269

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG----- 438
            VF+ ++ +++ SW + I G+ Q G   KA + F  M+ES + PN  T++++++      
Sbjct: 270 IVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVK 329

Query: 439 ------------------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                                         Y   G  DEA   F++MG+      +  SW
Sbjct: 330 DFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGR----AASNVSW 385

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           N+LIAGY    +   A+  F +M       N  T  ++  AC+   +     +IH  +++
Sbjct: 386 NALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIK 445

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
            ++ES+L V +SLI+ Y + G++  +  +F  +S  D+++WNS+I  Y  +G    A+ L
Sbjct: 446 SNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFL 505

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
             +M   G KP   TFL+++ A S +G+V  G++ F S+ + Y I P   H S M+D+ G
Sbjct: 506 LRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILG 565

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+G+LE A++FI+ + ++P +SIW  LL ACR + N+ +A    E++ DLEP D  +   
Sbjct: 566 RAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVT 625

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  +YA  G+  DA   R+L  +       G  WIEV N +Y F +   +      +Y  
Sbjct: 626 LSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEK 685

Query: 769 LQNV----------PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
           L+ +          P   T     S      + KE++   HSEKLA+ F L+ S      
Sbjct: 686 LKQLVRQIQDIGYSPPTTTVLHPES-----RQPKEQLILYHSEKLAVCFGLL-SLPPGKP 739

Query: 819 IRIVKNIRMCVHCHETAKYVS 839
           IR++KN+R+C+ C+ T KY+S
Sbjct: 740 IRVLKNLRVCLDCYSTMKYIS 760



 Score =  262 bits (670), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 141/435 (32%), Positives = 244/435 (56%), Gaps = 1/435 (0%)

Query: 58   NTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV-FVKTKLLSVYAKCGCLDDAREVFED 116
            +TY   +       +++  R LHA L ++    + +   KL+S Y +CG L +AR++F+ 
Sbjct: 804  DTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDK 863

Query: 117  MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
            +   N+  W  + GA +R   + E +  F  M ++GL P+ F+ P IL+ACG+  D   G
Sbjct: 864  IPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTG 923

Query: 177  KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
            + MH++++K        + ++++ +Y KCG +  A R F+ + +KD V  N+M+SGY Q 
Sbjct: 924  ENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQH 983

Query: 237  GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
            G   EA  L  KM +  +K  VV++N LI  ++Q+G   +  E+ + M + G+ PDV +W
Sbjct: 984  GFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANGVEPDVVSW 1043

Query: 297  TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
            T +ISGF QN    +  D FKEM   G  P+ VTI+S + ACT++  L  G EIH  A+ 
Sbjct: 1044 TSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMV 1103

Query: 357  MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            +G   DV V ++L++MY+KC  +  A+ +F M+ +++  +WNS+I GY   GYC +A EL
Sbjct: 1104 IGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIEL 1163

Query: 417  FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
            F +M+ESD   + +T+  +++     G  +    LF +M +  +++     +  ++    
Sbjct: 1164 FNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLG 1223

Query: 477  QLGQKNNALGVFRKM 491
            + G+ + A  + + M
Sbjct: 1224 RAGKLSEAYDLIKAM 1238



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/497 (27%), Positives = 228/497 (45%), Gaps = 42/497 (8%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDA 110
           G    R    + L  C     + L R+ H F+  +    D FV T L+ +YAKCG +D A
Sbjct: 108 GGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA 167

Query: 111 REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
             V++ M   +  T + +I AY+R+  + +  ++F  +   G  P+ + +  +L  CG  
Sbjct: 168 VRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTI 227

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
              + GK +H+ V+K+       V N++L +Y KCG +  A   FES+ +++ ++W + I
Sbjct: 228 SAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASI 287

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS----------------------- 267
           +G++Q G+  +A + F  M    I+    TF+I++ S                       
Sbjct: 288 NGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMA 347

Query: 268 ------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
                       Y+ LG+ D A +  K+M   G      +W  +I+G+  N +  +A++ 
Sbjct: 348 SGVFVGTAIIDMYSGLGEMDEAEKQFKQM---GRAASNVSWNALIAGYVLNEKIEKAMEA 404

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           F  M    V  N  T ++   AC+   +LA  ++IHS  +K     ++ V +SLI  Y++
Sbjct: 405 FCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQ 464

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
           C  LE A +VF  I D DV SWNS+I  Y Q G   KA  L  KM E    P   T+  +
Sbjct: 465 CGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTV 524

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           +S    +G   E  + F+ M ++  ++      + ++    + GQ  NAL   +K+    
Sbjct: 525 LSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLT--- 581

Query: 496 FYPNCVTILSVLPACAY 512
             P       +L AC Y
Sbjct: 582 MKPTASIWRPLLAACRY 598



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 148/662 (22%), Positives = 280/662 (42%), Gaps = 72/662 (10%)

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDM-RERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           VFV T ++ +Y+  G +D+A + F+ M R  +  +W+A+I  Y  +++  + +E F  MV
Sbjct: 350 VFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMV 409

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           ++ +  ++F +  I +AC +         +HS +IK  +     V +S++  Y +CG L 
Sbjct: 410 KEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLE 469

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A + F  + + D V+WNS+I  Y Q G+  +A  L  KM  E  K    TF  ++ + +
Sbjct: 470 NAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACS 529

Query: 270 QLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
             G      E  K M +   I P+    +CM+    + G+   ALD  K+++   + P  
Sbjct: 530 HSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLT---MKPTA 586

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
                 ++AC     L M   +    + +   +D  V  +L NMY++      AE    +
Sbjct: 587 SIWRPLLAACRYNSNLQMAEYVAEKILDLE-PNDATVYVTLSNMYAEVGRWADAENQRRL 645

Query: 389 IKDKDVY-----SW----NSMIAGYCQAGYCGKAYELFIKMQE-----SDVPPNVITWNV 434
           ++ K++      SW    N M   +       +  +++ K+++      D+  +  T  V
Sbjct: 646 MEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSPPTTTV 705

Query: 435 LISGYIQNGNEDEAVDLFQR-------------MGKNDKVKRN---------TASWNSLI 472
           L   + ++    E + L+                GK  +V +N         T  + S I
Sbjct: 706 L---HPESRQPKEQLILYHSEKLAVCFGLLSLPPGKPIRVLKNLRVCLDCYSTMKYISRI 762

Query: 473 ------------AGYQQLGQKNNALGVFRKMQS-SCFYPNCVTILSVLPACAYLVASNKV 519
                       A  Q L  + N   V+R + +   F  +  T    +   A   A  + 
Sbjct: 763 TDRYIPTPLAAAAAMQSLINRANVYRVYRNISTHRTFQSSSDTYAKAIDMYARDRALYRG 822

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
           + +H  ++   L         L+  Y + G +  +R +FD + + +I  W  L       
Sbjct: 823 RALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARR 882

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI------TECYQI 633
           GF+  AL  F +M+  GL+PN+    SI+ A         G+ +   I      ++ Y I
Sbjct: 883 GFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYII 942

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
                  SA+I +Y + G +E+A   + D  ++ D  +  A+++    HG +  A+  ++
Sbjct: 943 -------SALIYMYSKCGHVEKACR-VFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQ 994

Query: 694 RL 695
           ++
Sbjct: 995 KM 996



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 198/433 (45%), Gaps = 43/433 (9%)

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           + F G  P+   + SA+S C     + +G   H   VK+G   D  V  SLI+MY+KC E
Sbjct: 104 VEFGGGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGE 163

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS- 437
           +++A RV+D +   D  + N +I+ Y + G+  +A+++F+++      PN  T++ +++ 
Sbjct: 164 VDSAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAV 223

Query: 438 ----GYIQNGNEDEA-----------------VDLFQRMGKNDKV--------KRNTASW 468
                 IQ G +  A                 + L+ + G  ++         +RN  SW
Sbjct: 224 CGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISW 283

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
            + I G+ Q G    AL  F  M+ S   PN  T   VL +C  +      +  H  V++
Sbjct: 284 TASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIK 343

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALD 587
           + + S + V  ++ID Y+  G +  +   F  M  +   ++WN+LI GYVL+     A++
Sbjct: 344 KGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAME 403

Query: 588 LFDQMKSFGLKPNRGTFLSIILA----HSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            F +M    +  N  T+ +I  A     SLA  V +  ++  S  E    +      S++
Sbjct: 404 AFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVA-----SSL 458

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           I+ Y + G LE A++    +  + D   W +++ A   +G+   A+  + ++  +E G+ 
Sbjct: 459 IEAYTQCGSLENAVQVFTQIS-DADVVSWNSIIKAYSQNGDPWKAIFLLRKM--IEEGNK 515

Query: 704 LIQRLILQIYAIC 716
                 L + + C
Sbjct: 516 PTSXTFLTVLSAC 528



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 74/144 (51%), Gaps = 1/144 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           N ++ +A+     +  +       TY N+ +AC    S+    ++H+  +    E ++ V
Sbjct: 395 NEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHV 454

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+  Y +CG L++A +VF  + + ++ +W+++I AYS++    + + L   M+++G 
Sbjct: 455 ASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGN 514

Query: 154 FPDDFLFPKILQACGNCGDFEAGK 177
            P    F  +L AC + G  + G+
Sbjct: 515 KPTSXTFLTVLSACSHSGLVQEGQ 538


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 217/649 (33%), Positives = 331/649 (51%), Gaps = 83/649 (12%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++  W  M  G A +     AL L+  M  +G++P+  T    + +C   K    G +I
Sbjct: 52  PNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQI 111

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM---------------------- 388
           H   +K+GF  D+ V  SLI+MY++   LE A +VFD+                      
Sbjct: 112 HGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYI 171

Query: 389 ---------IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE-SDVPPN---------- 428
                    I  KDV SWN+MI+GY + G   +A ELF +M   ++V P+          
Sbjct: 172 ESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSA 231

Query: 429 ------------VITW-------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
                       V +W             N LI  Y + G  + A +LF  +   D +  
Sbjct: 232 CAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVI-- 289

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
              SWN+LI GY  +     AL +F++M  S   PN VT+LS+LPACA+L A +  + IH
Sbjct: 290 ---SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH 346

Query: 524 GCV---LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG-MSSKDIITWNSLICGYVLH 579
             +   L+  + +   +  SLID YAK G+I  ++ +FD  MS++ + TWN++I G+ +H
Sbjct: 347 VYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMH 406

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
           G  +AA D+F +M+  G++P+  TF+ ++ A S +GM+DLG+ +F S+T  Y+I P +EH
Sbjct: 407 GRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEH 466

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
           Y  MIDL G SG  +EA E I  MP+EPD  IW +LL AC+IHGN++L     ++L  +E
Sbjct: 467 YGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIE 526

Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC-WIEVKNLVYTFVTGGW- 757
           PG+     L+  IYA  G+  +  K+R L  +   +     C  IE+ ++V+ F+ G   
Sbjct: 527 PGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKL 586

Query: 758 ----SESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSS 813
                E Y  L    +          +S     +EEE +E     HSEKLA+AF LI S+
Sbjct: 587 HPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLAIAFGLI-ST 645

Query: 814 QAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQC 862
           +    + I+KN+R+C +CHE  K +S ++  EI   D     HF++G C
Sbjct: 646 KPGTKLTIMKNLRVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/507 (25%), Positives = 234/507 (46%), Gaps = 74/507 (14%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A  VF+ ++E NL  W+ M   ++        ++L+ +M+  GL PD + FP +L++C  
Sbjct: 42  AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAK 101

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
               + G+ +H  V+KLG      V  S++++Y + G+L  AR+ F+    +D V++ ++
Sbjct: 102 SKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTAL 161

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           I+GY   G  + A +LFD++  ++    VV++N +I  Y + G    A+E+ K M     
Sbjct: 162 IAGYVSRGYIESAQKLFDEIPGKD----VVSWNAMISGYVETGNYKEALELFKEM----- 212

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
                                        M    V P+  T+ + +SAC    ++ +G  
Sbjct: 213 -----------------------------MMMTNVRPDESTMVTVVSACAQSDSIELGRH 243

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +HS     GF  ++ + N+LI++YSK  E+E A  +FD + +KDV SWN++I GY     
Sbjct: 244 VHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNL 303

Query: 410 CGKAYELFIKMQESDVPPNVIT------------------W-----NVLISGYIQNGN-- 444
             +A  LF +M  S   PN +T                  W     N  + G + N +  
Sbjct: 304 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSL 363

Query: 445 EDEAVDLFQRMGKNDKVK---------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           +   +D++ + G  D  +         R+ ++WN++I+G+   G+ N A  +F +M+ + 
Sbjct: 364 QTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNG 423

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLR-RSLESSLPVMNSLIDTYAKSGNIVYS 554
             P+ +T + +L AC++    +  + I   + R   +   L     +ID    SG    +
Sbjct: 424 IEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEA 483

Query: 555 RTIFDGMS-SKDIITWNSLICGYVLHG 580
             + + M    D + W SL+    +HG
Sbjct: 484 EEMINTMPMEPDGVIWCSLLKACKIHG 510



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 160/360 (44%), Gaps = 68/360 (18%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREV---- 113
           T+  LL++C  S      +++H   L L  ++D++V T L+S+YA+ G L+DAR+V    
Sbjct: 91  TFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDIS 150

Query: 114 ---------------------------FEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
                                      F+++  +++ +W+AMI  Y     ++E +ELF 
Sbjct: 151 SHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFK 210

Query: 147 -LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
            +M+   + PD+     ++ AC      E G+ +HS +   G +   ++ N+++ +Y K 
Sbjct: 211 EMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKF 270

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G++  A   F+ +  KD ++WN++I GY  +    EA  LF +M R       VT   ++
Sbjct: 271 GEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 330

Query: 266 RSYNQLGQCDVA-------------------------MEMVKRMESLGITPDVF------ 294
            +   LG  D+                          ++M  +   +     VF      
Sbjct: 331 PACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSN 390

Query: 295 ----TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
               TW  MISGFA +GR + A D+F  M   G+ P+ +T    +SAC+    L +G  I
Sbjct: 391 RSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNI 450



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 179/371 (48%), Gaps = 25/371 (6%)

Query: 36  GRLNEAITVL-DSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN---LVTEIDV 91
           G   EA+ +  + +     +   +T + ++ AC  S+SI L R +H+++N     + + +
Sbjct: 200 GNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKI 259

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
                L+ +Y+K G ++ A E+F+ +  +++ +W+ +IG Y+    ++E + LF  M++ 
Sbjct: 260 V--NALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 317

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLV---IKLGMSCVRRVRNSVLAVYVKCGKL 208
           G  P+D     IL AC + G  + G+ +H  +   +K  ++ V  ++ S++ +Y KCG +
Sbjct: 318 GETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDI 377

Query: 209 IWARRFFE-SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
             A++ F+ SM  +    WN+MISG+   G  + A  +F +M    I+   +TF  L+ +
Sbjct: 378 DAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSA 437

Query: 268 YNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            +  G  D+   + + M     ITP +  + CMI     +G   +A ++   M    + P
Sbjct: 438 CSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMP---MEP 494

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS-----LINMYSKCEELEA 381
           +GV   S + AC     L +G       +K      +  GNS     L N+Y+       
Sbjct: 495 DGVIWCSLLKACKIHGNLELGESFAKKLIK------IEPGNSGSYVLLSNIYAAAGRWNE 548

Query: 382 AERVFDMIKDK 392
             ++  ++ DK
Sbjct: 549 VAKIRALLNDK 559


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 222/646 (34%), Positives = 323/646 (50%), Gaps = 46/646 (7%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITP--DVFTWTCMISGFAQNGRTSQALDLFKEM 319
           N LI  Y++L   + A  +++      +TP  +V +WT ++SG AQNG  S AL  F EM
Sbjct: 46  NYLINMYSKLDHPESARLVLR------LTPARNVVSWTSLVSGLAQNGHFSTALFEFFEM 99

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
              GV PN  T      A   L+    G +IH+LAVK G   DV VG S  +MY K    
Sbjct: 100 RREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR 159

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------- 432
           + A ++FD I ++++ +WN+ I+     G   +A E FI+ +     PN IT+       
Sbjct: 160 DDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNAC 219

Query: 433 --------NVLISGYIQNGNEDEAVDLFQRM----GKNDKVK-----------RNTASWN 469
                    + + G +     D  V ++  +    GK  +++           +N  SW 
Sbjct: 220 SDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWC 279

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           SL+A Y Q  +   A  ++ + +      +   I SVL ACA +      + IH   ++ 
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            +E ++ V ++L+D Y K G I  S   FD M  K+++T NSLI GY   G    AL LF
Sbjct: 340 CVERNIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALF 399

Query: 590 DQM--KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           + M  +  G  PN  TF+S++ A S AG V+ G K+F S+   Y I P  EHYS ++D+ 
Sbjct: 400 EDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDML 459

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           GR+G +E+A EFI+ MPI+P  S+W AL  ACR+HG   L +LA E LF L+P D     
Sbjct: 460 GRAGMVEQAFEFIKKMPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHV 519

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
           L+   +A  G+  +A  VR+  +    +   G  WI VKN V+ F     S   +  + +
Sbjct: 520 LLSNTFAAAGRWAEANTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQT 579

Query: 768 WLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
            L  +   + A      L      +EEEEK      HSEKLALAF L+    +   IRI 
Sbjct: 580 MLTKLRNKMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLVALPLSV-PIRIT 638

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN+R+C  CH   K+VS     EI + D+   H FK+G CSC DYW
Sbjct: 639 KNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/464 (24%), Positives = 205/464 (44%), Gaps = 35/464 (7%)

Query: 63  LLQACIDSNSIHLARKLHAFL--NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           LL+  I ++S+ L R +HA +   L +    F+   L+++Y+K    + AR V      R
Sbjct: 12  LLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           N+ +W++++   +++  +   +  FF M ++G+ P+DF FP + +A  +      GK +H
Sbjct: 72  NVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIH 131

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
           +L +K G      V  S   +Y K      AR+ F+ + E++   WN+ IS     G   
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPK 191

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV------- 293
           EA   F +  R   +   +TF   + + +     D+ M+M   +   G   DV       
Sbjct: 192 EAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLI 251

Query: 294 ------------------------FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
                                    +W  +++ + QN    +A  L+       V  +  
Sbjct: 252 DFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDF 311

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
            I+S +SAC  +  L +G  IH+ AVK     ++ VG++L++MY KC  +E +E+ FD +
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEM 371

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV--PPNVITWNVLISGYIQNGNEDE 447
            +K++ + NS+I GY   G    A  LF  M        PN +T+  L+S   + G  + 
Sbjct: 372 PEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVEN 431

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            + +F  M     ++     ++ ++    + G    A    +KM
Sbjct: 432 GMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKM 475



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 172/396 (43%), Gaps = 42/396 (10%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-D 90
           L  NG  + A+     +  +G      T+  + +A          +++HA       I D
Sbjct: 83  LAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILD 142

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           VFV      +Y K    DDAR++F+++ ERNL TW+A I     D R +E +E F    +
Sbjct: 143 VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRPKEAIEAFIEFRR 202

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G  P+   F   L AC +    + G  MH LV + G      V N ++  Y KC ++  
Sbjct: 203 IGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGLIDFYGKCKQIRS 262

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI---------------- 254
           +   F  M  K+ V+W S+++ Y Q  E+++A  L+ +  R+EI                
Sbjct: 263 SEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLR-SRKEIVETSDFMISSVLSACA 321

Query: 255 -----KLG----------VVTFNILIRS--YNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                +LG           V  NI + S   +  G+C    +  +  + +    ++ T  
Sbjct: 322 GMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDEMP-EKNLVTLN 380

Query: 298 CMISGFAQNGRTSQALDLFKEMSF--VGVMPNGVTITSAISACTDLKALAMGMEI-HSLA 354
            +I G+A  G+   AL LF++M+    G  PN +T  S +SAC+   A+  GM+I  S+ 
Sbjct: 381 SLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMK 440

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
              G        + +++M  +   +E A   F+ IK
Sbjct: 441 STYGIEPGAEHYSCIVDMLGRAGMVEQA---FEFIK 473


>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
 gi|194704572|gb|ACF86370.1| unknown [Zea mays]
 gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
          Length = 700

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 220/686 (32%), Positives = 359/686 (52%), Gaps = 53/686 (7%)

Query: 70  SNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMI 129
           S  +  AR+L   + L   +       +LS  A+ G +D+AR +F+ M  RN  +W+AMI
Sbjct: 31  SGQLAAARRLFDAMPLRNTV---TYNAMLSALARHGRIDEARALFDGMPGRNTVSWNAMI 87

Query: 130 GAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMS 189
            A S   R  +   LF  M       D+F +  ++      GD E   L   ++ ++   
Sbjct: 88  AALSDHGRVADARSLFDRMP----VRDEFSWTVMVSCYARGGDLE---LARDVLDRMPGD 140

Query: 190 CVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
                 N++++ Y K G+   A +    M   D V+WNS ++G  Q GE   A + FD+M
Sbjct: 141 KCTACYNAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSALAGLTQSGEMVRAVQFFDEM 200

Query: 250 CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT 309
            ++     + ++N+++  + + G  + A     ++ES    P+V +W  +++G+ + GR 
Sbjct: 201 VKD-----MTSWNLMLAGFVRTGDLNAASSFFAKIES----PNVISWVTLLNGYCRAGRI 251

Query: 310 SQALDLFKEM-------------SFVGVMP--------NGVTITSAISACTDLKALAMG- 347
           + A DLF  M              +V + P        + + I ++IS  T +  LA   
Sbjct: 252 ADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMPIKNSISWTTIISGLARAG 311

Query: 348 --MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
              E   L  KM F + V    +L++ Y +    + A R+FD ++  D   WN+MI+GY 
Sbjct: 312 KLQEAKDLLDKMSF-NCVAAKTALMHGYLQRNMADDARRIFDGMEVHDTVCWNTMISGYV 370

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
           Q G   +A  LF +M   D+    ++WN +I+GY Q+G   +A+ +F+RM +     RNT
Sbjct: 371 QCGILEEAMLLFQRMPNKDM----VSWNTMIAGYAQDGQMHKAIGIFRRMNR-----RNT 421

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
            SWNS+I+G+ Q  +  +AL  F  M+      +  T  S L ACA L   +  +++H  
Sbjct: 422 VSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAVLHVGRQLHNL 481

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
           ++R    +     N+LI TYAK G I+ ++ IFD M  KDI++WN+LI GY  +G    A
Sbjct: 482 LVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALIDGYASNGQGTEA 541

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           + +F +M++ G++P+  TF+ I+ A S AG++D G   F S+T+ Y + P+ EHY+ M+D
Sbjct: 542 IAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVAEHYACMVD 601

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           L GR+GKL EA E ++ M I+P++ +W ALL AC +H N +LA LA ERL +LEP     
Sbjct: 602 LLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLAAERLSELEPRKASN 661

Query: 706 QRLILQIYAICGKPEDALKVRKLERE 731
             L+  I A  GK +++ K R   +E
Sbjct: 662 YVLLSNISAEAGKWDESEKARASIKE 687


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 195/581 (33%), Positives = 311/581 (53%), Gaps = 39/581 (6%)

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           + P      S + +C   KA+  G ++H+     GF  D ++   L+N+Y  C+ L +A 
Sbjct: 71  LTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSAR 130

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG----- 438
            +FD I   +++ WN +I GY   G    A +L+ +M +  + P+  T+  ++       
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190

Query: 439 -----------YIQNGNEDEA------VDLFQRMG-------KNDKV-KRNTASWNSLIA 473
                       +Q G E +       +D++ + G         DK+  R+   WNS++A
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLA 250

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
            Y Q G  +  L +  +M  +   P   T+++ + A A   A  + +E+HG   R+  ES
Sbjct: 251 AYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFES 310

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
              V  +L+D YAK G++  +R +F+ +  K +++WN++I GY +HG    ALDLF++M 
Sbjct: 311 HDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMN 370

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
               KP+  TF+ ++ A S  G+++ G   F ++   Y+I P ++HY+ M+DL G SG+L
Sbjct: 371 RVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRL 429

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIY 713
           +EA   I  M + PDS +W ALL +C+IH N++L  +A+ERL +LEP D     ++  IY
Sbjct: 430 DEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNIY 489

Query: 714 AICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV- 772
           A  GK E   K+RKL  +   + S    WIEVKN V+ F++G  S   SD +YS L+ V 
Sbjct: 490 AQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELERVG 549

Query: 773 ---PENVTARSSHSGLC-IEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRM 827
               E   + S+ S    +E++EK  +   HSE+LA+AF LI  S  P T + I KN+R+
Sbjct: 550 GLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLI--STPPGTRLLITKNLRI 607

Query: 828 CVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           C  CH   K++S +   EI + D    HHFK+G CSCGDYW
Sbjct: 608 CEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 218/504 (43%), Gaps = 53/504 (10%)

Query: 8   TFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRR-NTYINLLQA 66
           TF    SL  +  NP F  +   F      L    +  +  A         + Y +LLQ+
Sbjct: 25  TFFASLSLQYQSPNPSFTSSAPQFDNNQTHLKAIPSCSNPHAESTCLTPTYSNYASLLQS 84

Query: 67  CIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTW 125
           CI   +I   ++LHA + L     D  + TKL+++Y  C  L  AR +F+ + + N++ W
Sbjct: 85  CIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHNIFLW 144

Query: 126 SAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK 185
           + +I  Y+ +  +   V+L++ M   GL PD+F FP +L+AC      E G+ +H  V++
Sbjct: 145 NVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQ 204

Query: 186 LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRL 245
            G      V  +++ +Y KCG +  AR  F+ +  +D V WNSM++ Y Q G  D    L
Sbjct: 205 TGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSL 264

Query: 246 FDKMC-----------------------------------REEIKLGVVTFNILIRSYNQ 270
             +M                                    R+E +        L+  Y +
Sbjct: 265 CSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVDMYAK 324

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G   VA  + +R   LG+   V +W  MI+G+A +G  ++ALDLF+EM+ V   P+ +T
Sbjct: 325 CGSVRVARNLFER---LGVK-RVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHIT 379

Query: 331 ITSAISACTDLKALAMG-MEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDM 388
               +SAC+    L  G M   ++         V     ++++      L EA   +  M
Sbjct: 380 FVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSGRLDEAYNLIMQM 439

Query: 389 IKDKDVYSWNSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
               D   W +++     +        A E  I+++  D    VI  N+    Y Q G  
Sbjct: 440 KVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSNI----YAQAGKW 495

Query: 446 DEAVDLFQRMGKNDKVKRNTA-SW 468
            E V   +++  + ++K++ A SW
Sbjct: 496 -EGVAKLRKLMTDRRLKKSIACSW 518



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 115/251 (45%), Gaps = 31/251 (12%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           ++F W  +I G+A NG    A+ L+ +M   G++P+  T    + AC  L A+  G EIH
Sbjct: 140 NIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIH 199

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
              V+ G+  DV VG +LI+MY+KC  + +A  VFD I  +D   WNSM+A Y Q G+  
Sbjct: 200 EHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPD 259

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQN-----GNEDEAVDLFQRMGKNDKVK---- 462
               L  +M  + + P   T    IS    N     G E   +   Q    +DKVK    
Sbjct: 260 ACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALV 319

Query: 463 ---------------------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
                                +   SWN++I GY   G    AL +F +M      P+ +
Sbjct: 320 DMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHI 378

Query: 502 TILSVLPACAY 512
           T + VL AC++
Sbjct: 379 TFVGVLSACSH 389



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 96/196 (48%), Gaps = 4/196 (2%)

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
           +S+C  P      S+L +C    A    K++H  V          +   L++ Y    ++
Sbjct: 67  ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL 126

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             +R +FD +   +I  WN LI GY  +G + AA+ L+ QM  +GL P+  TF  ++ A 
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186

Query: 612 SLAGMVDLGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSS 670
           +    ++ G+++   + +  ++    +   +A+ID+Y + G +  A E  + + +  D+ 
Sbjct: 187 AALSAIEHGREIHEHVVQTGWEKDVFVG--AALIDMYAKCGCVGSAREVFDKILVR-DAV 243

Query: 671 IWEALLTACRIHGNID 686
           +W ++L A   +G+ D
Sbjct: 244 LWNSMLAAYSQNGHPD 259


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 222/621 (35%), Positives = 313/621 (50%), Gaps = 40/621 (6%)

Query: 287 LGITP--DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
           L +TP  +V +WT +ISG AQNG  S AL  F EM   GV+PN  T   A  A   L+  
Sbjct: 15  LRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLP 74

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
             G +IH+LAVK G   DV VG S  +MY K    + A ++FD I ++++ +WN+ I+  
Sbjct: 75  VTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNS 134

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLIS---------------GYIQNGNEDEAV 449
              G   +A E FI+ +  D  PN IT+   ++               G +     D  V
Sbjct: 135 VTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDV 194

Query: 450 D----LFQRMGKNDKVK-----------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
                L    GK  +++           +N  SW SL+A Y Q  +   A  ++ + +  
Sbjct: 195 SVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKD 254

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
               +   I SVL ACA +      + IH   ++  +E ++ V ++L+D Y K G I  S
Sbjct: 255 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDS 314

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM--KSFGLKPNRGTFLSIILAHS 612
              FD M  K+++T NSLI GY   G    AL LF++M  +  G  PN  TF+S++ A S
Sbjct: 315 EQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 374

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
            AG V+ G K+F S+   Y I P  EHYS ++D+ GR+G +E A EFI+ MPI+P  S+W
Sbjct: 375 RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 434

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
            AL  ACR+HG   L +LA E LF L+P D     L+   +A  G+  +A  VR+  +  
Sbjct: 435 GALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGV 494

Query: 733 TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----I 787
             +   G  WI VKN V+ F     S   +  + + L  +   + A      L      +
Sbjct: 495 GIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDL 554

Query: 788 EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIF 847
           EEEEK      HSEKLALAF L+ S      IRI KN+R+C  CH   K+VS     EI 
Sbjct: 555 EEEEKAAEVSHHSEKLALAFGLL-SLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREII 613

Query: 848 LADSKCLHHFKNGQCSCGDYW 868
           + D+   H FK+G CSC DYW
Sbjct: 614 VRDNNRFHRFKDGICSCKDYW 634



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 186/425 (43%), Gaps = 33/425 (7%)

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +Y+K    + AR V      RN+ +W+++I   +++  +   +  FF M ++G+ P+DF 
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           FP   +A  +      GK +H+L +K G      V  S   +Y K      AR+ F+ + 
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
           E++   WN+ IS     G   EA   F +  R +     +TF   + + +     ++ M+
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQ 180

Query: 280 M-------------------------VKRMESLGI------TPDVFTWTCMISGFAQNGR 308
           +                          K++ S  I      T +  +W  +++ + QN  
Sbjct: 181 LHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHE 240

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
             +A  L+       V  +   I+S +SAC  +  L +G  IH+ AVK      + VG++
Sbjct: 241 DEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSA 300

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV--P 426
           L++MY KC  +E +E+ FD + +K++ + NS+I GY   G    A  LF +M        
Sbjct: 301 LVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPT 360

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALG 486
           PN +T+  L+S   + G  +  + +F  M     ++     ++ ++    + G    A  
Sbjct: 361 PNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYE 420

Query: 487 VFRKM 491
             +KM
Sbjct: 421 FIKKM 425



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 175/442 (39%), Gaps = 75/442 (16%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-D 90
           L  NG  + A+     +  +G      T+    +A          +++HA       I D
Sbjct: 33  LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILD 92

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           VFV      +Y K    DDAR++F+++ ERNL TW+A I     D R RE +E F    +
Sbjct: 93  VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRR 152

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
               P+   F   L AC +      G  +H LV++ G      V N ++  Y KC ++  
Sbjct: 153 IDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRS 212

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           +   F  M  K+ V+W S+++ Y Q  E+++A  L+ +  R++I   V T + +I S   
Sbjct: 213 SEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR-SRKDI---VETSDFMISSVLS 268

Query: 271 LGQCDVAMEMVKRMESLGITP-----------------------------------DVFT 295
                  +E+ + + +  +                                     ++ T
Sbjct: 269 ACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVT 328

Query: 296 WTCMISGFAQNGRTSQALDLFKEMS--FVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
              +I G+A  G+   AL LF+EM+    G  PN +T  S +SAC+   A+  GM+I   
Sbjct: 329 RNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIF-- 386

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
                        +S+ + Y      E    + DM+                +AG   +A
Sbjct: 387 -------------DSMRSTYGIEPGAEHYSCIVDMLG---------------RAGMVERA 418

Query: 414 YELFIKMQESDVPPNVITWNVL 435
           YE   KM    + P +  W  L
Sbjct: 419 YEFIKKMP---IQPTISVWGAL 437



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 4/161 (2%)

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           Y+K  +   +R +     ++++++W SLI G   +G +  AL  F +M+  G+ PN  TF
Sbjct: 2   YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 61

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
                A +   +   GK++     +C +I+ +    SA  D+Y ++   ++A +  +++P
Sbjct: 62  PCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSA-FDMYCKTRLRDDARKLFDEIP 120

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLA-IE-RLFDLEPGDV 703
            E +   W A ++     G    A+ A IE R  D  P  +
Sbjct: 121 -ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSI 160


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 212/759 (27%), Positives = 366/759 (48%), Gaps = 71/759 (9%)

Query: 80  HAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
           H   + +   D      +L+ Y   G  D A  +F  M + ++ +W+ +I  Y +   +R
Sbjct: 74  HGVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFR 133

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
             V L   M + G+  D      +L++CG   D   G  +H+L +K G+    R  ++++
Sbjct: 134 NSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALV 193

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +Y KC  L  A RFF  M E++ V+W + I+G  Q  +      LF +M R  + +   
Sbjct: 194 DMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQP 253

Query: 260 TFNILIRSYNQLGQCDVAMEM----VK--------------------------RMESLGI 289
            +    RS   +     A ++    +K                          R   +G+
Sbjct: 254 AYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGL 313

Query: 290 TP-DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
              +V T   M+ G  + G  ++A+ LF+ M+  GV  + ++++   SAC ++K    G+
Sbjct: 314 PHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGL 373

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ-- 406
           ++H LAVK GF  DV V N+++++Y KC+ L  A  VF  ++ +D  SWN++IA   Q  
Sbjct: 374 QVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNE 433

Query: 407 -------------------------------AGYCGKAYELFI--KMQESDVPPNVITWN 433
                                          AG     Y L +  K  +S +  +    +
Sbjct: 434 CYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSS 493

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
            ++  Y + G   EA  L  R+G  + V     SWNS+I+G+    Q   A   F +M  
Sbjct: 494 TVVDMYCKCGAITEAQKLHDRIGGQELV-----SWNSIISGFSLTKQSEEAQRFFSEMLD 548

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
               P+  T  +VL  CA L      K+IHG ++++ +     + ++L+D YAK GN+  
Sbjct: 549 MGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPD 608

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           S  +F+     D ++WN++ICGY LHG    AL++F++M+   + PN  TF++++ A S 
Sbjct: 609 SLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSH 668

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
            G++D G + F  +T  Y+++P +EH++ M+D+ GRS   +EA+EFI  MPIE D+ +W+
Sbjct: 669 VGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWK 728

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
            LL+ C+I  ++++A  A   +  L+P D  +  L+  +YA  GK  D  + R+L R+  
Sbjct: 729 TLLSICKIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGR 788

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
            R   G  WIEV++ ++ F+ G      S  +Y  L ++
Sbjct: 789 LRKEPGCSWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSL 827



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 150/621 (24%), Positives = 266/621 (42%), Gaps = 82/621 (13%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LN 84
           +T +   C +G    ++ +   ++ +G  + R T   LL++C   + + L  ++HA  + 
Sbjct: 120 NTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVK 179

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
              E DV   + L+ +Y KC  LDDA   F  M ERN  +W A I    +++++   +EL
Sbjct: 180 TGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMEL 239

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           F  M + GL      +    ++C         + +H+  IK   S  R V  +++ VY K
Sbjct: 240 FVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAK 299

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
            G L+ ARR F  +   +    N+M+ G  + G   EA +LF  M R  +   V++ + +
Sbjct: 300 AGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGV 359

Query: 265 ------IRSYNQ--------------------------LGQCDVAME---MVKRMESLGI 289
                 ++ Y Q                           G+C   +E   + + ME    
Sbjct: 360 FSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQ--- 416

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             D  +W  +I+   QN      +    EM   G+ P+  T  S + AC  L++L  G+ 
Sbjct: 417 -RDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLV 475

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H  A+K G   D  V +++++MY KC  +  A+++ D I  +++ SWNS+I+G+     
Sbjct: 476 VHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQ 535

Query: 410 CGKAYELFIKMQESDVPPNVITW-----------------------------------NV 434
             +A   F +M +  V P+  T+                                   + 
Sbjct: 536 SEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISST 595

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           L+  Y + GN  +++ +F++  K D V     SWN++I GY   GQ   AL +F +MQ +
Sbjct: 596 LVDMYAKCGNMPDSLLMFEKARKLDFV-----SWNAMICGYALHGQGLEALEMFERMQRA 650

Query: 495 CFYPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
              PN  T ++VL AC+++ +  +  +  H    R  L   L     ++D   +S     
Sbjct: 651 NVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQE 710

Query: 554 SRTIFDGMS-SKDIITWNSLI 573
           +      M    D + W +L+
Sbjct: 711 ALEFIRSMPIEADAVVWKTLL 731



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 143/571 (25%), Positives = 253/571 (44%), Gaps = 76/571 (13%)

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
           N ++  Y + G    AH +FD M   +     V++N ++ +Y   G  D A  +   M  
Sbjct: 58  NCLLQMYARCGGTAHAHGVFDTMPHRD----TVSWNTMLTAYVHAGDTDTAASLFGTMPD 113

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
               PDV +W  +ISG+ Q+G    ++ L  EMS  GV  +  T+   + +C  L  LA+
Sbjct: 114 ----PDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLAL 169

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G++IH+LAVK G   DV  G++L++MY KC  L+ A R F  + +++  SW + IAG  Q
Sbjct: 170 GVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQ 229

Query: 407 AGYCGKAYELFIKMQESDVP----------------PNVITWNVLISGYIQNGNEDEA-- 448
                +  ELF++MQ   +                 P + T   L +  I+N    +   
Sbjct: 230 NEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVV 289

Query: 449 ----VDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
               VD++ + G     +R        N  + N+++ G  + G    A+ +F+ M  S  
Sbjct: 290 GTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGV 349

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
             + +++  V  ACA +    +  ++H   ++   +  + V N+++D Y K   +V +  
Sbjct: 350 GFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYL 409

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA------ 610
           +F  M  +D ++WN++I     +  +   +   ++M   G++P+  T+ S++ A      
Sbjct: 410 VFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQS 469

Query: 611 -------HSLAGMVDLGKKVFCS------------ITECYQIIPMIE-----HYSAMIDL 646
                  H  A    LG   F S            ITE  ++   I       ++++I  
Sbjct: 470 LEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISG 529

Query: 647 YGRSGKLEEAMEFIE---DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP-GD 702
           +  + + EEA  F     DM ++PD   +  +L  C     I+L      ++   E  GD
Sbjct: 530 FSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGD 589

Query: 703 VLIQRLILQIYAICGKPEDAL----KVRKLE 729
             I   ++ +YA CG   D+L    K RKL+
Sbjct: 590 EYISSTLVDMYAKCGNMPDSLLMFEKARKLD 620



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/411 (23%), Positives = 168/411 (40%), Gaps = 75/411 (18%)

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK---- 390
           + A     AL  G   H+  +  GF     V N L+ MY++C     A  VFD +     
Sbjct: 26  LCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDT 85

Query: 391 ---------------------------DKDVYSWNSMIAGYCQAGY-------------- 409
                                      D DV SWN++I+GYCQ G               
Sbjct: 86  VSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRR 145

Query: 410 ---------------CGKAYELFIKMQ------ESDVPPNVITWNVLISGYIQNGNEDEA 448
                          CG   +L + +Q      ++ +  +V   + L+  Y +  + D+A
Sbjct: 146 GVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDA 205

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
           +  F  MG+     RN+ SW + IAG  Q  Q    + +F +MQ      +     S   
Sbjct: 206 LRFFHGMGE-----RNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFR 260

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT 568
           +CA +   +  +++H   ++    S   V  +++D YAK+GN+V +R  F G+   ++ T
Sbjct: 261 SCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVET 320

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC-SI 627
            N+++ G V  G    A+ LF  M   G+  +  +   +  A +       G +V C ++
Sbjct: 321 CNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAV 380

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
              + +   + +  A++DLYG+   L EA    ++M  + DS  W A++ A
Sbjct: 381 KSGFDVDVCVRN--AILDLYGKCKALVEAYLVFQEME-QRDSVSWNAIIAA 428


>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
 gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 215/703 (30%), Positives = 359/703 (51%), Gaps = 73/703 (10%)

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMI-GAYSRDQRWREVVELFFLMVQ 150
           +V+  ++ ++AK    +DA  VF+D+   N+  W+A+I GA    + W   ++LF  M  
Sbjct: 183 YVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWV-ALDLFCQMCC 241

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
               P+ F F  IL AC    + E G+ +   VIK G      V  +++ +Y KC  +  
Sbjct: 242 RFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQ 301

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK---------------------- 248
           A + F  M  ++ V+W ++ISG+ Q  ++  A   F +                      
Sbjct: 302 AVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTE 361

Query: 249 --MCREEIKLGVVTF-----------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
             M +E ++L    F           + LI  Y+++G  D++  + + MES   T ++  
Sbjct: 362 PVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMES---TKNLAM 418

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  MIS FAQ+G T +A++LF+ M   G+ P+    +S +S    + +L++G  IH   +
Sbjct: 419 WAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSI---IDSLSLGRLIHCYIL 475

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K+G   D+ VG+SL  MYSKC  LE +  VF+ + DKD  SW SMI G+ +  +  +A +
Sbjct: 476 KIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQ 535

Query: 416 LFIKMQESDVPPNVITWNVLISG-----YIQNGNEDEAVDLFQRMGKNDKV--------- 461
           LF +M   ++ P+ +T    ++       ++ G E     L  R+GK   V         
Sbjct: 536 LFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYS 595

Query: 462 ----------------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
                           +++  S +SL++GY Q G   +AL +F +++ +  + +  T+ S
Sbjct: 596 KCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSS 655

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           V+ A A L + +   ++H CV +  L + + V +SL+  Y+K G+I     +F+ +   D
Sbjct: 656 VIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPD 715

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
           +I+W ++I  Y  HG    AL ++D M+  G KP+  TF+ ++ A S  GMV+ G     
Sbjct: 716 LISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLN 775

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
           S+ + Y I P   HY+ M+DL GRSG+L+EA  FI +MPIEPD+ +W  LL AC++HG+I
Sbjct: 776 SMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDI 835

Query: 686 DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKL 728
           +L  LA +R+ +LEP +      +  I A  G  ED +K+R L
Sbjct: 836 ELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSL 878



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 195/730 (26%), Positives = 332/730 (45%), Gaps = 121/730 (16%)

Query: 80  HAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGA----YSRD 135
           H     + + + F+   L+  Y K   +  A  +F+     N+ +W+ +I      +S +
Sbjct: 70  HFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFE 129

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
             WR   ++ F     G  P+ F +  +L AC   G    G+L++SL +K G      VR
Sbjct: 130 DSWRNFCKMRF----SGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVR 185

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC----- 250
             ++ ++ K      A R F+ +  ++ V WN++ISG  +  EN  A  LF +MC     
Sbjct: 186 AGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFM 245

Query: 251 ---------------REEIKLG---------------VVTFNILIRSYNQLGQCDVAMEM 280
                           EE++ G               V     +I  Y +    D A++ 
Sbjct: 246 PNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKE 305

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
             RM       +V +WT +ISGF Q   +  A   FKEM  VG   N  TITS ++ACT+
Sbjct: 306 FLRMP----IRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTE 361

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWNS 399
              +   +++HS   K GF  D  V ++LINMYSK   ++ +ERVF +M   K++  W  
Sbjct: 362 PVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAV 421

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPP-------------------------------- 427
           MI+ + Q+G  G+A ELF +M +  + P                                
Sbjct: 422 MISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSLGRLIHCYILKIGLFT 481

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           ++   + L + Y + G+ +E+  +F++M   D V     SW S+I G+ +      A+ +
Sbjct: 482 DISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNV-----SWASMITGFSEHDHAEQAVQL 536

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           FR+M      P+ +T+ + L AC+ L +  K KE+HG  LR  +   + V  +L++ Y+K
Sbjct: 537 FREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSK 596

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G IV +R +FD +  KD  + +SL+ GY  +G+   AL LF +++   L  +  T  S+
Sbjct: 597 CGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSV 656

Query: 608 ILAHSLAGMVDLGKKVFC-------------------------SITECYQIIPMIEH--- 639
           I A ++   +D+G ++                           SI EC+++   IE    
Sbjct: 657 IGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDL 716

Query: 640 --YSAMIDLYGRSGKLEEAMEFIEDMPIE---PDSSIWEALLTACRIHGNIDLA---VLA 691
             ++AMI  Y + GK  EA++  + M  E   PDS  +  +L+AC  +G ++     + +
Sbjct: 717 ISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNS 776

Query: 692 IERLFDLEPG 701
           + + + +EPG
Sbjct: 777 MAKEYGIEPG 786



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 220/440 (50%), Gaps = 38/440 (8%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDA 110
           G K+   T  ++L AC +   I  A +LH+++      +D  V + L+++Y+K G +D +
Sbjct: 344 GEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLS 403

Query: 111 REVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
             VF +M   +NL  W+ MI A+++       VELF  M+Q+GL PD F    +L    +
Sbjct: 404 ERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDS 463

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
                 G+L+H  ++K+G+     V +S+  +Y KCG L  +   FE M +KD V+W SM
Sbjct: 464 ---LSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASM 520

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS---------------------- 267
           I+G+ +    ++A +LF +M  EEI+   +T    + +                      
Sbjct: 521 ITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARV 580

Query: 268 ----------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
                      N   +C  A+ + +R+  +    D F+ + ++SG+AQNG    AL LF 
Sbjct: 581 GKEVLVGGALVNMYSKCG-AIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFH 639

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
           E+    +  +  T++S I A   L +L +G ++H+   KMG   +V VG+SL+ MYSKC 
Sbjct: 640 EIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCG 699

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
            ++   +VF+ I+  D+ SW +MI  Y Q G   +A +++  M++    P+ +T+  ++S
Sbjct: 700 SIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLS 759

Query: 438 GYIQNGNEDEAVDLFQRMGK 457
               NG  +E       M K
Sbjct: 760 ACSHNGMVEEGYSHLNSMAK 779



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 176/367 (47%), Gaps = 34/367 (9%)

Query: 71  NSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMI 129
           +S+ L R +H + L +    D+ V + L ++Y+KCG L+++  VFE M +++  +W++MI
Sbjct: 462 DSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMI 521

Query: 130 GAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMS 189
             +S      + V+LF  M+ + + PD       L AC      E GK +H   ++  + 
Sbjct: 522 TGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVG 581

Query: 190 CVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
               V  +++ +Y KCG ++ ARR F+ + +KD  + +S++SGY Q G  ++A  LF ++
Sbjct: 582 KEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEI 641

Query: 250 CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT------------------- 290
              ++ +   T + +I +   L   D+  ++   +  +G+                    
Sbjct: 642 RMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSI 701

Query: 291 ------------PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
                       PD+ +WT MI  +AQ+G+ ++AL ++  M   G  P+ VT    +SAC
Sbjct: 702 DECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSAC 761

Query: 339 TDLKALAMGM-EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER-VFDMIKDKDVYS 396
           +    +  G   ++S+A + G          ++++  +   L+ AER + +M  + D   
Sbjct: 762 SHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALL 821

Query: 397 WNSMIAG 403
           W  ++A 
Sbjct: 822 WGILLAA 828



 Score = 82.4 bits (202), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 106/201 (52%), Gaps = 3/201 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-LVTEIDVFV 93
           NG + +A+ +   I      +   T  +++ A    NS+ +  +LHA +  +    +V V
Sbjct: 628 NGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSV 687

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+++Y+KCG +D+  +VFE + + +L +W+AMI +Y++  +  E ++++ LM ++G 
Sbjct: 688 GSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGT 747

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  +L AC + G  E G   ++S+  + G+         ++ +  + G+L  A 
Sbjct: 748 KPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAE 807

Query: 213 RFFESMD-EKDGVAWNSMISG 232
           RF  +M  E D + W  +++ 
Sbjct: 808 RFINNMPIEPDALLWGILLAA 828



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 102/242 (42%), Gaps = 37/242 (15%)

Query: 519 VKEIHGCVLRRS-LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
            K +H   L+ + L+S+  + NSL+  Y KS ++V++  +FD     ++I+WN LI G  
Sbjct: 64  TKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCN 123

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
            +  +  +   F +M+  G  PN+ T+ S++ A +  G    G+ V+ S+          
Sbjct: 124 QNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVY-SLALKNGFFSNG 182

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMPIE------------------------------- 666
              + MIDL+ +    E+A+   +D+  E                               
Sbjct: 183 YVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCR 242

Query: 667 ---PDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG-DVLIQRLILQIYAICGKPEDA 722
              P+S  + ++LTAC     ++        +     G DV +   I+ +YA C   + A
Sbjct: 243 FFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQA 302

Query: 723 LK 724
           +K
Sbjct: 303 VK 304


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 218/702 (31%), Positives = 344/702 (49%), Gaps = 118/702 (16%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMS-----------------C 190
           +V+D   P+   F K+L +C         +L+H+ ++    S                 C
Sbjct: 6   LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65

Query: 191 VRRVR--------------NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           +   R              NS+++V  K G L  A R F SM E D  +WNSM+SG+ Q 
Sbjct: 66  LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125

Query: 237 GENDEAHRLFDKMCREEIKLGVVTF----------------------------------- 261
              +E+   F KM RE+  L   +F                                   
Sbjct: 126 DRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMG 185

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           + LI  Y++ G    A E+   M    I  ++ TW  +I+ + QNG  S+AL++F  M  
Sbjct: 186 SALIDMYSKCGSVACAEEVFSGM----IERNLVTWNSLITCYEQNGPASEALEVFVRMMD 241

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG-FTDDVLVGNSLINMYSKCEELE 380
            G+ P+ VT+ S +SAC  L AL  G++IH+  VK   F DD+++GN+L++MY+KC ++ 
Sbjct: 242 SGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVN 301

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
            A RVFD +  ++V S  SM+                                   SGY 
Sbjct: 302 EARRVFDRMSIRNVVSETSMV-----------------------------------SGYA 326

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           +  +   A  +F +M      +RN  SWN+LIAGY Q G+   AL +FR ++    +P  
Sbjct: 327 RAASVKAARFMFSKM-----TQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTH 381

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLE------SSLPVMNSLIDTYAKSGNIVYS 554
            T  ++L ACA L      ++ H  VL++  E      S + V NSLID Y K G+I   
Sbjct: 382 YTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDG 441

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
             +F+ M  +D ++WN++I GY  +G+   AL +F +M   G KP+  T + ++ A S A
Sbjct: 442 SRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHA 501

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G+V+ G+  F S+ E + +IP+ +HY+ M+DL GR+G L EA   IE MP+ PD+ +W +
Sbjct: 502 GLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGS 560

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           LL AC++HGNI++   A E+L +++P +     L+  +YA  G+  D ++VRKL R+   
Sbjct: 561 LLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGV 620

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV 776
               G  WIEV++ V+ F+    S  +   +YS L+ + E +
Sbjct: 621 TKQPGCSWIEVESRVHVFLVKDKSHPHRKQIYSVLKMLTEQM 662



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 128/476 (26%), Positives = 214/476 (44%), Gaps = 103/476 (21%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTE--IDVFVKTKLLSVYAKCGCLDDAREVFE 115
           + +  LL +C+ S S    R +HA + L+T+  +++F++ +L+ VY KC CLDDAR++F+
Sbjct: 16  SPFAKLLDSCLRSRSARGTRLVHARI-LMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFD 74

Query: 116 DMRERNLYT-------------------------------WSAMIGAYSRDQRWREVVEL 144
            M +RN +T                               W++M+  +++  R+ E +E 
Sbjct: 75  RMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEY 134

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           F  M ++    +++ F   L AC    D   G  +H+LV K   S    + ++++ +Y K
Sbjct: 135 FVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSK 194

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--- 261
           CG +  A   F  M E++ V WNS+I+ Y Q G   EA  +F +M    ++   VT    
Sbjct: 195 CGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASV 254

Query: 262 ---------------------------------NILIRSYNQLGQCDVAMEMVKRMESLG 288
                                            N L+  Y +  + + A  +  RM    
Sbjct: 255 VSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRN 314

Query: 289 ITPD---------------------------VFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           +  +                           V +W  +I+G+ QNG   +AL LF+ +  
Sbjct: 315 VVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKR 374

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF------TDDVLVGNSLINMYSK 375
             + P   T  + +SAC +L  L +G + H+  +K GF        D+ VGNSLI+MY K
Sbjct: 375 ESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMK 434

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           C  +E   RVF+ +K++D  SWN++I GY Q GY  +A ++F KM      P+ +T
Sbjct: 435 CGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVT 490



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 161/352 (45%), Gaps = 42/352 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVF 92
           NG  +EA+ V   +   G +    T  +++ AC    ++    ++HA +    +   D+ 
Sbjct: 226 NGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLV 285

Query: 93  VKTKLLSVYAKCGCLDDAREVFE-------------------------------DMRERN 121
           +   L+ +YAKC  +++AR VF+                                M +RN
Sbjct: 286 LGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRN 345

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
           + +W+A+I  Y+++    E + LF L+ ++ ++P  + F  +L AC N  D   G+  H+
Sbjct: 346 VVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHT 405

Query: 182 LVIKLGMSCVRR------VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
            V+K G            V NS++ +Y+KCG +    R FE M E+D V+WN++I GY Q
Sbjct: 406 HVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQ 465

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
            G   EA ++F KM     K   VT   ++ + +  G  +        ME  G+ P    
Sbjct: 466 NGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDH 525

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
           +TCM+    + G  ++A +L + M    V P+ V   S ++AC     + MG
Sbjct: 526 YTCMVDLLGRAGCLNEAKNLIEAMP---VNPDAVVWGSLLAACKVHGNIEMG 574



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 119/264 (45%), Gaps = 9/264 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-------NLVT 87
           NG   EA+ +   +  +       T+ NLL AC +   + L R+ H  +           
Sbjct: 359 NGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGA 418

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           E D+FV   L+ +Y KCG ++D   VFE M+ER+  +W+A+I  Y+++    E +++F  
Sbjct: 419 ESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRK 478

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M+  G  PD      +L AC + G  E G+     + + G+  ++     ++ +  + G 
Sbjct: 479 MLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVDLLGRAGC 538

Query: 208 LIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           L  A+   E+M    D V W S+++     G  +      +K+  E        + +L  
Sbjct: 539 LNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLL-EIDPWNSGPYVLLSN 597

Query: 267 SYNQLGQCDVAMEMVKRMESLGIT 290
            Y +LG+    + + K M   G+T
Sbjct: 598 MYAELGRWGDVVRVRKLMRQQGVT 621


>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
 gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
          Length = 810

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 197/583 (33%), Positives = 314/583 (53%), Gaps = 16/583 (2%)

Query: 287 LGITPDVFT--WTCMISGFAQNGRTSQALDLFKEMSFVG--VMPNGVTITSAISACTDLK 342
           L  +PD  T  +  ++ G         AL LF  M   G    P+  T   A+ +C    
Sbjct: 77  LDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAATD 136

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
            L +G +IHS   ++G   +V V +S I+MY++C   + A ++F+ ++ +DV SWN+MI+
Sbjct: 137 GLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMIS 196

Query: 403 GYCQAGYCGKAYELFIKMQESDVP-PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
           G+  AG  G+A ++F ++     P P+  T   ++    +   ED A+      G  D++
Sbjct: 197 GFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIAL----LKGVFDEM 252

Query: 462 K-RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
           + +   SWN+++A Y        A+ +F +MQ     P+ VT+ +VLP+C  + A +  K
Sbjct: 253 RFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGK 312

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
            IH  + RR + SS+ + N+L+D YA  G +  +R +FD M ++D+++W S+I  Y  HG
Sbjct: 313 RIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHG 372

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
               A+DLF++M   GL+P+   F++I+ A S AG++D+GK  F S+T  + I P +EHY
Sbjct: 373 HGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHY 432

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
           + M+DL GR+G + EA +FI  MPI+P+  +W ALL ACRIH N+D+ +LA + L  L P
Sbjct: 433 ACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACRIHSNMDIGLLAADSLLRLAP 492

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
                  L+  IYA  G+  D   VR +      +   G    E+ + V+TF  G  S  
Sbjct: 493 KQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGVSNAELGDRVHTFHIGDTSHP 552

Query: 761 YSDLLYSWLQNVPENVTARSSHSGL-----CIEEEEKEEISGIHSEKLALAFALIGSSQA 815
            S ++Y  L  +   +     +  +      +EEE+KE    +HSEKLA+AF LI ++  
Sbjct: 553 QSKMIYKKLSELLRRIREMGYNPEVEATLHDVEEEDKEGHLSVHSEKLAIAFLLINTNPG 612

Query: 816 PHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
              IRI  N+R C  CH  AK +S +   EI L D   +H+ K
Sbjct: 613 T-PIRITMNLRTCSDCHHAAKLISTIAGREIILKDVNRIHYMK 654



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 195/408 (47%), Gaps = 14/408 (3%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEI-----DVFVKTKLLSVYAKCGCLDDARE 112
           +  + L+ +C     +   R  HA L  +  +        V+ KL+  YA C  L  AR 
Sbjct: 16  HALLRLVDSCRAPAHLRSLRAAHARLLFLLRLPSHPASAAVRVKLIQAYAACAALPAARA 75

Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG--LFPDDFLFPKILQACGNC 170
           V +   +R    ++ ++   +     R+ + LF  M   G   FPD + +P  L++C   
Sbjct: 76  VLDASPDRTTVFFNVLLRGLTAASLHRDALLLFASMRPQGHACFPDHYTYPLALKSCAAT 135

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
                G+ +HS   +LG+     V +S +++Y +CG+   A + FE M  +D V+WN+MI
Sbjct: 136 DGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVSWNAMI 195

Query: 231 SGYFQIGENDEAHRLFDKMCREE-IKLGVVTFNILIRSYNQLGQCDVAM--EMVKRMESL 287
           SG+   G    A  +F ++   +  K    T   ++ S  +    D+A+   +   M   
Sbjct: 196 SGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFK 255

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
           G+     +W  M++ +  N    +A++LF  M   G+ P+ VT+ + + +C ++ AL++G
Sbjct: 256 GL----ISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLG 311

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
             IH +  +      +L+ N+L++MY+ C  L+ A  VFD +  +DV SW S+I+ Y + 
Sbjct: 312 KRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRH 371

Query: 408 GYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           G+  +A +LF KM    + P+ I +  +++     G  D     F  M
Sbjct: 372 GHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSM 419



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 113/227 (49%), Gaps = 4/227 (1%)

Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD 172
           VF++MR + L +W+AM+  Y+ ++   E VELF  M +DG+ PD      +L +CG    
Sbjct: 248 VFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSA 307

Query: 173 FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISG 232
              GK +H ++ +  M     + N+++ +Y  CG L  AR  F+SM  +D V+W S+IS 
Sbjct: 308 LSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISA 367

Query: 233 YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITP 291
           Y + G   EA  LF+KMC + ++   + F  ++ + +  G  D+       M S   I P
Sbjct: 368 YGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAP 427

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
            +  + CM+    + G   +A D    M    + PN     + + AC
Sbjct: 428 KLEHYACMVDLLGRAGCIREAYDFIMVMP---IKPNERVWGALLGAC 471



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 94/191 (49%), Gaps = 19/191 (9%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFVKTKLL 98
           EA+ +   +   G +    T   +L +C + +++ L +++H  +        + ++  L+
Sbjct: 275 EAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALM 334

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +YA CGCL +AR+VF+ M  R++ +W+++I AY R    RE ++LF  M   GL PD  
Sbjct: 335 DMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSI 394

Query: 159 LFPKILQACGNCGDFEAG---------------KLMH--SLVIKLGMS-CVRRVRNSVLA 200
            F  IL AC + G  + G               KL H   +V  LG + C+R   + ++ 
Sbjct: 395 AFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMV 454

Query: 201 VYVKCGKLIWA 211
           + +K  + +W 
Sbjct: 455 MPIKPNERVWG 465


>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 198/587 (33%), Positives = 309/587 (52%), Gaps = 50/587 (8%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P+ F WT MI G+A  G  S++ + +  M   GV P   T ++   AC     + +G ++
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164

Query: 351 HSLAVKMG-FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           H+  + +G F  D+ VGNS                               MI  Y + G+
Sbjct: 165 HAQTILIGGFASDLYVGNS-------------------------------MIDLYVKCGF 193

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
            G A ++F +M E DV    ++W  LI  Y + G+ + A  LF  +   D V     +W 
Sbjct: 194 LGCARKVFDEMSERDV----VSWTELIVAYAKYGDMESASGLFDDLPSKDMV-----AWT 244

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           +++ GY Q G+   AL  F+KMQ      + VT+  V+ ACA L A      I     R 
Sbjct: 245 AMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERS 304

Query: 530 SLESS--LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
               S  + V ++LID Y+K G+   +  +F+ M  +++ +++S+I GY +HG  H+AL 
Sbjct: 305 GFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQ 364

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           LF  M    ++PN+ TF+ I+ A S AG+V+ G+++F  + + + + P  +HY+ M+DL 
Sbjct: 365 LFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLL 424

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           GR+G LEEA++ ++ MP+EP+  +W ALL ACRIHGN D+A +A   LF LEP  +    
Sbjct: 425 GRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYI 484

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN-LVYTFVTGGWSESYSDLLY 766
           L+  IYA  G+ E+  K+RK+ RE   + + G  W E KN  ++ F  G  +   S  + 
Sbjct: 485 LLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIR 544

Query: 767 SWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRI 821
             L+ + E + +      L      + ++EKE I   HSEKLALA+ L+  ++A  TI+I
Sbjct: 545 QALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLL-CTEAGDTIKI 603

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +KNIR+C  CH      S +   EI + D+   HHF NG CSCG++W
Sbjct: 604 MKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 206/424 (48%), Gaps = 47/424 (11%)

Query: 92  FVKTKLLSVYAKCGCLDDARE--VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           +V TKL+ +  K      +    VF  +   N + W+AMI  Y+      E    +  M 
Sbjct: 75  YVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMR 134

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKL 208
           +DG+ P  F F  + +ACG   + + GK +H+  I +G  +    V NS++ +YVKCG L
Sbjct: 135 RDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFL 194

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             AR+ F+ M E+D V+W  +I  Y + G+ + A  LFD +  +++    V +  ++  Y
Sbjct: 195 GCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDM----VAWTAMVTGY 250

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
            Q G+   A+E  ++M+ +G+  D                         E++  GV    
Sbjct: 251 AQNGRPKEALEYFQKMQDVGMETD-------------------------EVTLAGV---- 281

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGF--TDDVLVGNSLINMYSKCEELEAAERVF 386
                 ISAC  L A+     I  +A + GF  + +V+VG++LI+MYSKC   + A +VF
Sbjct: 282 ------ISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVF 335

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
           +++K+++V+S++SMI GY   G    A +LF  M ++++ PN +T+  ++S     G  +
Sbjct: 336 EVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVE 395

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           +   LF +M K   V  +   +  ++    + G    AL + + M      PN     ++
Sbjct: 396 QGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMP---MEPNGGVWGAL 452

Query: 507 LPAC 510
           L AC
Sbjct: 453 LGAC 456



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 178/397 (44%), Gaps = 46/397 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVF 92
            G L+E+      +   G      T+  L +AC  + ++ L +++HA   L+     D++
Sbjct: 120 QGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLY 179

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWS-------------------------- 126
           V   ++ +Y KCG L  AR+VF++M ER++ +W+                          
Sbjct: 180 VGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKD 239

Query: 127 -----AMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
                AM+  Y+++ R +E +E F  M   G+  D+     ++ AC   G  +    +  
Sbjct: 240 MVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRD 299

Query: 182 LVIK--LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           +  +   G S    V ++++ +Y KCG    A + FE M E++  +++SMI GY   G  
Sbjct: 300 IAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRA 359

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTC 298
             A +LF  M + EI+   VTF  ++ + +  G  +   ++  +ME   G+ P    + C
Sbjct: 360 HSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYAC 419

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           M+    + G   +ALDL K M    + PNG    + + AC     +    +I  +A    
Sbjct: 420 MVDLLGRAGCLEEALDLVKTMP---MEPNGGVWGALLGACR----IHGNPDIAQIAANEL 472

Query: 359 FT-DDVLVGNSLI--NMYSKCEELEAAERVFDMIKDK 392
           F  +   +GN ++  N+Y+     E   ++  +I++K
Sbjct: 473 FKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREK 509



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 120/259 (46%), Gaps = 6/259 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA---RKLHAFLNLVTEIDV 91
           NGR  EA+     +   G +    T   ++ AC    ++  A   R +          +V
Sbjct: 253 NGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNV 312

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            V + L+ +Y+KCG  D+A +VFE M+ERN++++S+MI  Y+   R    ++LF  M++ 
Sbjct: 313 VVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKT 372

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK-LGMSCVRRVRNSVLAVYVKCGKLIW 210
            + P+   F  IL AC + G  E G+ + + + K  G++        ++ +  + G L  
Sbjct: 373 EIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEE 432

Query: 211 ARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
           A    ++M  E +G  W +++      G  D A    +++ + E   G+  + +L   Y 
Sbjct: 433 ALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPN-GIGNYILLSNIYA 491

Query: 270 QLGQCDVAMEMVKRMESLG 288
             G+ +   ++ K +   G
Sbjct: 492 SAGRWEEVSKLRKVIREKG 510



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 11/225 (4%)

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV--YSRTIFDG 560
           ++S+L  C      +++K++H  ++R  L     V+  LI    K    +  Y   +F  
Sbjct: 45  LMSILHDCTLF---SQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQ 101

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           ++  +   W ++I GY L G    + + + +M+  G+ P   TF ++  A   A  +DLG
Sbjct: 102 VNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 161

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
           K+V             +   ++MIDLY + G L  A +  ++M  E D   W  L+ A  
Sbjct: 162 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMS-ERDVVSWTELIVAYA 220

Query: 681 IHGNIDLAVLAIERLFDLEPG-DVLIQRLILQIYAICGKPEDALK 724
            +G+++ A      LFD  P  D++    ++  YA  G+P++AL+
Sbjct: 221 KYGDMESA----SGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALE 261


>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 196/572 (34%), Positives = 323/572 (56%), Gaps = 27/572 (4%)

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           K G+++ ARR F+ M E D + W ++ISGY + G  +EA RLFD   R + K  VVT+  
Sbjct: 64  KDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFD---RVDAKKNVVTWTA 120

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           ++  Y +  +   A ++   M +     +V +W  MI G+AQNGR   A+ LF++M    
Sbjct: 121 MVGGYIRSNKISDAEKLFNEMPN----KNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERN 176

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V+ +  T+ S ++ C  ++      E   L  +M    DV+   ++I   SK   ++ A 
Sbjct: 177 VV-SWNTVMSMLAQCGRIE------EARRLFDRMP-ERDVISWTAMIAGLSKNGRIDEAR 228

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
            +FD + +++V SWN+MI GY Q     +A +LF +M E D+P    +WN +I+G IQNG
Sbjct: 229 LLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLP----SWNTMITGLIQNG 284

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS-CFYPNCVT 502
           +   A  LF     N+  K+N  SW ++I G  Q G+   AL +F +M S+    PN  T
Sbjct: 285 DLRRARKLF-----NEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGT 339

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF-DGM 561
            +SVL AC+ L    + +++H  + +   + S  V+++LI+ Y+K G +  +R +F DGM
Sbjct: 340 FVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGM 399

Query: 562 SS-KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           +S +D+++WN +I  Y  HG+   A++ F +M+  G KP+  T++ ++ A S AG+V+ G
Sbjct: 400 TSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEG 459

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
            K F  + +   I+   +HY+ ++DL GR+G+L+EA  FIE +  +P + +W ALL  C 
Sbjct: 460 LKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCN 519

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           +H N+ +   A ++L ++EP +     L+  IYA  GK  +A +VR   ++   +   G 
Sbjct: 520 VHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGC 579

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
            WIEV N V+ FV G  S S S L+YS L+++
Sbjct: 580 SWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDL 611



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 228/467 (48%), Gaps = 51/467 (10%)

Query: 76  ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM-RERNLYTWSAMIGAYSR 134
           AR+L    + + E DV   T ++S Y KCG +++AR +F+ +  ++N+ TW+AM+G Y R
Sbjct: 71  ARRL---FDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIR 127

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
             +  +  +LF  M    +   + +           G  + G++  ++ +   M     V
Sbjct: 128 SNKISDAEKLFNEMPNKNVVSWNTMID---------GYAQNGRIDSAMYLFEKMPERNVV 178

Query: 195 R-NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
             N+V+++  +CG++  ARR F+ M E+D ++W +MI+G  + G  DEA  LFD+M    
Sbjct: 179 SWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERN 238

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT----------------------- 290
               VV++N +I  Y Q  + D A+++ +RM    +                        
Sbjct: 239 ----VVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFN 294

Query: 291 ----PDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALA 345
                +V +WT MI+G  Q G + +AL +F  M S  G  PN  T  S + AC++L  L 
Sbjct: 295 EMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLG 354

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD--MIKDKDVYSWNSMIAG 403
            G ++H +  K  + D   V ++LINMYSKC EL  A ++FD  M   +D+ SWN +IA 
Sbjct: 355 EGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAA 414

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
           Y   GY  +A   F +M++S   P+ +T+  L+S     G  +E +  F  + K+  +  
Sbjct: 415 YAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILV 474

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               +  L+    + G+   A G   ++++    P+     ++L  C
Sbjct: 475 REDHYACLVDLCGRAGRLKEAFGFIERLETK---PSARVWGALLAGC 518



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 119/526 (22%), Positives = 218/526 (41%), Gaps = 104/526 (19%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +D    NGR++ A+ + + +  +   V  NT +++L  C     I  AR+L    + 
Sbjct: 150 NTMIDGYAQNGRIDSAMYLFEKMPERNV-VSWNTVMSMLAQC---GRIEEARRL---FDR 202

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           + E DV   T +++  +K G +D+AR +F+ M ERN+ +W+AMI  Y+++ R  E ++LF
Sbjct: 203 MPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLF 262

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M +  L       P                                  N+++   ++ 
Sbjct: 263 ERMPERDL-------PSW--------------------------------NTMITGLIQN 283

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---------------- 249
           G L  AR+ F  M +K+ ++W +MI+G  Q GE++EA ++F +M                
Sbjct: 284 GDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSV 343

Query: 250 ---CREEIKLG-----------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
              C     LG                     + LI  Y++ G+   A +M    + +  
Sbjct: 344 LGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFD--DGMTS 401

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             D+ +W  +I+ +A +G   +A++ FKEM   G  P+ VT    +SAC+    +  G++
Sbjct: 402 QRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLK 461

Query: 350 IHSLAVKMGFTDDVLVGNS----LINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIAGY 404
                VK      +LV       L+++  +   L+ A    + ++ K     W +++AG 
Sbjct: 462 YFDELVK---DRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGC 518

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                     +   K+ E + P N  T+ +L + Y   G   EA  +  +M      K+ 
Sbjct: 519 NVHANVKIGKQAAKKLLEVE-PENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQP 577

Query: 465 TASW-------NSLIAGYQQLGQKNNALGVFR----KMQSSCFYPN 499
             SW       +  + G +   Q      + R    KM+ + + PN
Sbjct: 578 GCSWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGYEPN 623



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 13/162 (8%)

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           N +I   +K G I+ +R +FD M   D+ITW ++I GY+  G    A  LFD++ +   K
Sbjct: 56  NWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDA---K 112

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
            N  T+ +++  +  +  +   +K+F  +         +  ++ MID Y ++G+++ AM 
Sbjct: 113 KNVVTWTAMVGGYIRSNKISDAEKLFNEMPN-----KNVVSWNTMIDGYAQNGRIDSAMY 167

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
             E MP E +   W  +++     G I+ A     RLFD  P
Sbjct: 168 LFEKMP-ERNVVSWNTVMSMLAQCGRIEEA----RRLFDRMP 204


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 192/569 (33%), Positives = 304/569 (53%), Gaps = 37/569 (6%)

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           +  CT  K L  G  +H+  ++  F  D+++GN+L+NMY+KC  LE A +VF+ +  +D 
Sbjct: 67  LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDF 126

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS----------------- 437
            +W ++I+GY Q      A   F +M      PN  T + +I                  
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGF 186

Query: 438 ----GYIQNGNEDEAV-DLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNA 484
               G+  N +   A+ DL+ R G  D  +        RN  SWN+LIAG+ +      A
Sbjct: 187 CVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKA 246

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           L +F+ M    F P+  +  S+  AC+      + K +H  +++   +      N+L+D 
Sbjct: 247 LELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 306

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           YAKSG+I  +R IFD ++ +D+++WNSL+  Y  HGF   A+  F++M+  G++PN  +F
Sbjct: 307 YAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           LS++ A S +G++D G   +  + +   I+P   HY  ++DL GR+G L  A+ FIE+MP
Sbjct: 367 LSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
           IEP ++IW+ALL ACR+H N +L   A E +F+L+P D     ++  IYA  G+  DA +
Sbjct: 426 IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAAR 485

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY-SDLLYSW---LQNVPE-NVTAR 779
           VRK  +E+  +      W+E++N ++ FV          ++   W   L  + E      
Sbjct: 486 VRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPD 545

Query: 780 SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVS 839
           +SH  + ++++E+E     HSEK+ALAFAL+ +     TI I KNIR+C  CH   K  S
Sbjct: 546 TSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGS-TIHIKKNIRVCGDCHTAIKLAS 604

Query: 840 MMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +   EI + D+   HHFK+G CSC DYW
Sbjct: 605 KVVGREIIVRDTNRFHHFKDGNCSCKDYW 633



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 208/452 (46%), Gaps = 48/452 (10%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           R  Y  LL+ C     +   R +HA  L  +   D+ +   LL++YAKCG L++AR+VFE
Sbjct: 60  RRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFE 119

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            M +R+  TW+ +I  YS+  R  + +  F  M++ G  P++F    +++A         
Sbjct: 120 KMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +H   +K G      V +++L +Y + G +  A+  F++++ ++ V+WN++I+G+ +
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239

Query: 236 IGENDEAHRLFDKMCREE-------------------------------IKLG--VVTF- 261
               ++A  LF  M R+                                IK G  +V F 
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299

Query: 262 -NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
            N L+  Y + G    A ++  R+       DV +W  +++ +AQ+G   +A+  F+EM 
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
            VG+ PN ++  S ++AC+    L  G   + L  K G   +     +++++  +  +L 
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415

Query: 381 AAER-VFDMIKDKDVYSWNSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
            A R + +M  +     W +++     +        A E   ++   D  P+VI +N+  
Sbjct: 416 RALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYA 475

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           SG    G  ++A  + ++M ++   K    SW
Sbjct: 476 SG----GRWNDAARVRKKMKESGVKKEPACSW 503



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 159/336 (47%), Gaps = 55/336 (16%)

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           RRF+ ++ +K  V +  +I G         AH +   + R +I +G    N L+  Y + 
Sbjct: 60  RRFYNTLLKKCTV-FKLLIQGRIV-----HAH-ILQSIFRHDIVMG----NTLLNMYAKC 108

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           G  + A ++ ++M       D  TWT +ISG++Q+ R   AL  F +M   G  PN  T+
Sbjct: 109 GSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTL 164

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           +S I A    +    G ++H   VK GF  +V VG++L+++Y++   ++ A+ VFD ++ 
Sbjct: 165 SSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES 224

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------------- 432
           ++  SWN++IAG+ +     KA ELF  M      P+  ++                   
Sbjct: 225 RNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWV 284

Query: 433 ----------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
                           N L+  Y ++G+  +A  +F R+ K D V     SWNSL+  Y 
Sbjct: 285 HAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV-----SWNSLLTAYA 339

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
           Q G    A+  F +M+     PN ++ LSVL AC++
Sbjct: 340 QHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSH 375



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 173/390 (44%), Gaps = 43/390 (11%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D   +  +L+ C        G+++H+ +++        + N++L +Y KCG L  AR+ F
Sbjct: 59  DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-------- 267
           E M ++D V W ++ISGY Q     +A   F++M R        T + +I++        
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178

Query: 268 ---------------------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
                                      Y + G  D A  +   +ES     DV +W  +I
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRN---DV-SWNALI 234

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +G A+   T +AL+LF+ M   G  P+  +  S   AC+    L  G  +H+  +K G  
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
                GN+L++MY+K   +  A ++FD +  +DV SWNS++  Y Q G+  +A   F +M
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
           +   + PN I++  +++    +G  DE    ++ M K D +      + +++    + G 
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGD 413

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            N AL    +M      P      ++L AC
Sbjct: 414 LNRALRFIEEMP---IEPTAAIWKALLNAC 440


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 223/734 (30%), Positives = 350/734 (47%), Gaps = 94/734 (12%)

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------------- 261
           M +++ V+WNS+ISGY Q+G   E   LF +    +++L   TF                
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 262 -------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
                              N LI  Y + G+ D A  + +  + L    D  +W  +I+G
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADEL----DSVSWNSLIAG 116

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD--LKALAMGMEIHSLAVKMGFT 360
           + + G   + L L  +M   G+  N   + SA+ AC      ++  G  +H  AVK+G  
Sbjct: 117 YVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLD 176

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG-----YCGKAYE 415
            DV+VG +L++ Y+K  +LE A ++F ++ D +V  +N+MIAG+ Q       +  +A  
Sbjct: 177 LDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMY 236

Query: 416 LFIKMQESDVPPNVITW-----------------------------------NVLISGYI 440
           LF +MQ   + P+  T+                                   N L+  Y 
Sbjct: 237 LFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYS 296

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
            +G+ ++ +  F    K D V     SW SLI G+ Q GQ    L +F ++  S   P+ 
Sbjct: 297 LSGSIEDGLKCFHSTPKLDVV-----SWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDE 351

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
            TI  +L ACA L A    ++IH   ++  + +   + NS I  YAK G+I  +   F  
Sbjct: 352 FTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKE 411

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
             + DI++W+ +I     HG    A+DLF+ MK  G+ PN  TFL +++A S  G+V+ G
Sbjct: 412 TKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEG 471

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
            + F  + + + I P ++H + ++DL GR+G+L EA  FI D   E D  +W +LL+ACR
Sbjct: 472 LRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACR 531

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           +H   D      ER+ +LEP       L+  IY   G    A ++R L ++   +   G 
Sbjct: 532 VHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGL 591

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA-----RSSHSGLCIEEEEKEEI 795
            WIEV N+V++FV G  S   S ++Y  L+ + E +           S     + +   +
Sbjct: 592 SWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYIDEKLVSDASEPKHKDNSM 651

Query: 796 SGIHSEKLALAFALIG-SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCL 854
              HSEKLA+ F +I     AP  +R++KN+R C HCHET K  S + + EI L D    
Sbjct: 652 VSYHSEKLAVTFGIISLPRSAP--VRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRF 709

Query: 855 HHFKNGQCSCGDYW 868
           H F++G CSCGDYW
Sbjct: 710 HRFRDGSCSCGDYW 723



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 155/590 (26%), Positives = 272/590 (46%), Gaps = 50/590 (8%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           G  +E + +         ++ + T+ N L  C  +  + L R +HA + +      V + 
Sbjct: 20  GFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLT 79

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+ +Y KCG +D AR VFE   E +  +W+++I  Y R     E++ L   M++ GL 
Sbjct: 80  NSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLN 139

Query: 155 PDDFLFPKILQACGN--CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            + +     L+ACG+      E GK++H   +KLG+     V  ++L  Y K G L  A 
Sbjct: 140 LNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDAT 199

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGE-----NDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           + F+ M + + V +N+MI+G+ Q+        +EA  LF +M    +K    TF+ ++++
Sbjct: 200 KIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKA 259

Query: 268 -------------------YNQLGQCDVAMEMVK----------RMESLGITP--DVFTW 296
                              YN      +   +V+           ++    TP  DV +W
Sbjct: 260 CSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSW 319

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
           T +I G  QNG+    L LF E+ F G  P+  TI+  +SAC +L A+  G +IH+ A+K
Sbjct: 320 TSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIK 379

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
            G  +  ++ NS I MY+KC ++++A   F   K+ D+ SW+ MI+   Q G   +A +L
Sbjct: 380 TGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDL 439

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
           F  M+ S + PN IT+  ++      G  +E +  F+ M K+  +  N      ++    
Sbjct: 440 FELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIV---D 496

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
            LG+          +  S F  + V   S+L AC    A++  K +   V+    E++  
Sbjct: 497 LLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAAS 556

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDI-----ITWNSLICGYVLHGF 581
            +  L + Y  +G  + +  I + M  + +     ++W  +  G V+H F
Sbjct: 557 YV-LLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSW--IEVGNVVHSF 603



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 124/263 (47%), Gaps = 8/263 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF-- 92
           NG+    +T+   +   G K    T   +L AC +  ++    ++HA+  + T I  F  
Sbjct: 329 NGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYA-IKTGIGNFTI 387

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           ++   + +YAKCG +D A   F++ +  ++ +WS MI + ++    +E V+LF LM   G
Sbjct: 388 IQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSG 447

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS--VLAVYVKCGKLIW 210
           + P+   F  +L AC + G  E G L +  ++K        V++S  ++ +  + G+L  
Sbjct: 448 IAPNHITFLGVLVACSHGGLVEEG-LRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAE 506

Query: 211 ARRF-FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
           A  F  +S  E D V W S++S        D   R+ +++   E +    ++ +L   YN
Sbjct: 507 AESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPE-AAASYVLLYNIYN 565

Query: 270 QLGQCDVAMEMVKRMESLGITPD 292
             G    A E+   M+  G+  +
Sbjct: 566 DAGIQMPATEIRNLMKDRGVKKE 588


>gi|297844718|ref|XP_002890240.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336082|gb|EFH66499.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  333 bits (853), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 210/699 (30%), Positives = 350/699 (50%), Gaps = 77/699 (11%)

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRE---RNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           +    +SVY++ G L DAR VFE +      +L  W++++ A      +    EL+  M 
Sbjct: 91  LAANFVSVYSRLGLLLDARNVFETVSLVLWSDLRLWNSILKANVSHGLYENAFELYRGMR 150

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           + GL  D F+ P IL+AC   G F   +  HS VI++G+     V N +L +Y K  ++ 
Sbjct: 151 ERGLTGDGFILPLILRACRYLGRFGLCRAFHSQVIQIGLKENLHVANELLTLYPKAARIG 210

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A   F  M  ++ ++WN                                   ++I+ ++
Sbjct: 211 DAYNLFVEMPVRNRMSWN-----------------------------------VMIKGFS 235

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           Q   C+ A+++ + M+     PD  TWT ++S  +Q G+    +  F  M       +G 
Sbjct: 236 QEFDCESAVKIFEWMQREDFKPDEVTWTSLLSCHSQCGKFEDVIKYFHVMRMSASAVSGE 295

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
            +    S C +L AL++  ++H   +K GF + +   N+LI++Y K  +++ AE++F  I
Sbjct: 296 ALAVFFSVCAELGALSIADKVHGFVIKGGFEECLPSRNALIHVYGKQGKVKDAEQLFRQI 355

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
           ++K + S                                   WN LI+ ++  G  DEA+
Sbjct: 356 RNKGIES-----------------------------------WNSLITSFVDAGKLDEAL 380

Query: 450 DLFQRMGKND---KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
            LF  + + D    VK N  +W S+I G    G+ + +L  FR+MQ S    N VTI  +
Sbjct: 381 SLFTELEEMDDVCNVKANVVTWTSVIKGCNVQGRGDYSLEYFRRMQFSKVLSNSVTICCI 440

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
           L  CA L A N  +EIHG V+R S+  ++ V N+L++ Y K G +     +F+ +  KD+
Sbjct: 441 LSICAELPALNLGREIHGHVIRTSMSDNILVQNALVNMYTKCGLLREGSLVFEAIRDKDL 500

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
           I+WNS+I GY +HGF   AL +FD+M   G  P+    ++++ A S AG+V+ G+K+F S
Sbjct: 501 ISWNSIIKGYGMHGFGEKALSMFDRMIKSGCHPDGIALVAVLSACSHAGLVEKGRKIFYS 560

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
           +++ + + P  EHY+ ++DL GR G L+EA E +++MP+EP   +  ALL +CR+H N+D
Sbjct: 561 MSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNMD 620

Query: 687 LAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
           +A +   +L  LEP       L+  IY+  G+ E++ KVR L ++   +   G  WIE+K
Sbjct: 621 IAEIIASQLRVLEPERTGSYMLLSNIYSAGGRWEESAKVRALAKKKDLKKVSGSSWIELK 680

Query: 747 NLVYTFVTGGWSESYSDLLYSWLQN-VPENVTARSSHSG 784
             +Y F +G   +S    +Y  L++ V   V    +H G
Sbjct: 681 KKIYKFSSGSIVQSEFASIYPVLEDLVSHMVKEGPTHDG 719



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 198/437 (45%), Gaps = 79/437 (18%)

Query: 63  LLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
           +L+AC       L R  H+  + +  + ++ V  +LL++Y K   + DA  +F +M  RN
Sbjct: 164 ILRACRYLGRFGLCRAFHSQVIQIGLKENLHVANELLTLYPKAARIGDAYNLFVEMPVRN 223

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE------- 174
             +W+ MI  +S++      V++F  M ++   PD+  +  +L     CG FE       
Sbjct: 224 RMSWNVMIKGFSQEFDCESAVKIFEWMQREDFKPDEVTWTSLLSCHSQCGKFEDVIKYFH 283

Query: 175 ---------AGKLM-------------------HSLVIKLGMSCVRRVRNSVLAVYVKCG 206
                    +G+ +                   H  VIK G       RN+++ VY K G
Sbjct: 284 VMRMSASAVSGEALAVFFSVCAELGALSIADKVHGFVIKGGFEECLPSRNALIHVYGKQG 343

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF------DKMCREEIKLGVVT 260
           K+  A + F  +  K   +WNS+I+ +   G+ DEA  LF      D +C   +K  VVT
Sbjct: 344 KVKDAEQLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFTELEEMDDVC--NVKANVVT 401

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
           +  +I+  N  G+ D ++E  +RM+                                   
Sbjct: 402 WTSVIKGCNVQGRGDYSLEYFRRMQ----------------------------------- 426

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
           F  V+ N VTI   +S C +L AL +G EIH   ++   +D++LV N+L+NMY+KC  L 
Sbjct: 427 FSKVLSNSVTICCILSICAELPALNLGREIHGHVIRTSMSDNILVQNALVNMYTKCGLLR 486

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
               VF+ I+DKD+ SWNS+I GY   G+  KA  +F +M +S   P+ I    ++S   
Sbjct: 487 EGSLVFEAIRDKDLISWNSIIKGYGMHGFGEKALSMFDRMIKSGCHPDGIALVAVLSACS 546

Query: 441 QNGNEDEAVDLFQRMGK 457
             G  ++   +F  M K
Sbjct: 547 HAGLVEKGRKIFYSMSK 563



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 4/142 (2%)

Query: 51  QGAKVRRN--TYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFVKTKLLSVYAKCGCL 107
           Q +KV  N  T   +L  C +  +++L R++H  +   +  D + V+  L+++Y KCG L
Sbjct: 426 QFSKVLSNSVTICCILSICAELPALNLGREIHGHVIRTSMSDNILVQNALVNMYTKCGLL 485

Query: 108 DDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC 167
            +   VFE +R+++L +W+++I  Y       + + +F  M++ G  PD      +L AC
Sbjct: 486 REGSLVFEAIRDKDLISWNSIIKGYGMHGFGEKALSMFDRMIKSGCHPDGIALVAVLSAC 545

Query: 168 GNCGDFEAG-KLMHSLVIKLGM 188
            + G  E G K+ +S+  + G+
Sbjct: 546 SHAGLVEKGRKIFYSMSKRFGL 567


>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
 gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
          Length = 701

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 218/686 (31%), Positives = 355/686 (51%), Gaps = 52/686 (7%)

Query: 70  SNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMI 129
           S  +  AR+L    + +   +      +LS  A+ G +D+AR +F+ M  RN  +W+AMI
Sbjct: 31  SGQLAAARRL---FDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPSRNAVSWNAMI 87

Query: 130 GAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMS 189
            A S   R  +   LF  M       DDF +  ++      G+ E   L   ++ ++   
Sbjct: 88  AALSDHGRVADARGLFDRMPSR----DDFSWTVMVSCYARAGELE---LARDVLDRMPGD 140

Query: 190 CVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
                 N++++ Y K G+   A +    M   D  +WNS ++G  Q G+   A + FD+M
Sbjct: 141 KCTACYNAMISGYAKNGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQMVRAVQFFDEM 200

Query: 250 CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT 309
             +++    V++N+++  + + G  D A     R+ES    P+V +W  +++G+ + GR 
Sbjct: 201 VEKDM----VSWNLMLEGFVRAGDLDAAASFFGRIES----PNVVSWVTLLNGYCRAGRI 252

Query: 310 SQALDLFKEMSFVGVMPNGVTI---------------------TSAISACTDLKALAMG- 347
           S A DLF  M    V+   V +                      ++IS  T +  LA   
Sbjct: 253 SDARDLFDRMPERNVVACNVMLDGYVRLSRLEEACKLFDEMPGKNSISWTTIISGLARAG 312

Query: 348 --MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
              E   L  KM F + V    +L++ Y +   +  A ++FD ++  D   WN+MI+GY 
Sbjct: 313 KLQEAKDLLDKMSF-NCVAAKTALMHGYLQRNMVNDARQIFDGMEVHDTVCWNTMISGYV 371

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
           Q G   +A  LF +M   D     ++WN +I+GY Q G   +A+ +F+RM +     +NT
Sbjct: 372 QRGMLEEAMLLFQRMPNKDT----VSWNTMIAGYAQGGQMRKAIGIFRRMSR-----KNT 422

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
            SWNS+I+G+ Q G   +A   F  M+      +  T  S L ACA L A +  +++H  
Sbjct: 423 VSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRACANLAALHVGRQLHSL 482

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
           ++R    + L   N+LI TYAK G ++ ++ IFD M  KDI++WN+L+ GY  +G    A
Sbjct: 483 LVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKDIVSWNALVDGYASNGQGTEA 542

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           + +F +M++ G++P+  TF+ I+ A S AG++D G   F S+TE Y + P+ EHY+ M D
Sbjct: 543 ISVFREMEANGVRPDEVTFVGILSACSRAGLIDEGLGFFNSMTEEYSLKPVAEHYACMAD 602

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           L GR+GKL EA E ++ M I+P++ +W ALL AC+++ N +LA LA E+L +LEP     
Sbjct: 603 LLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACQMYKNHELARLAAEKLSELEPCRASN 662

Query: 706 QRLILQIYAICGKPEDALKVRKLERE 731
             L+  I A  GK ++A K R   +E
Sbjct: 663 YVLLSNISAEAGKWDEAEKARASIKE 688



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 139/543 (25%), Positives = 239/543 (44%), Gaps = 82/543 (15%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N  L    + G+L  ARR F+SM  ++ V +NSM+S   + G  DEA  LFD M      
Sbjct: 22  NQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPSRN-- 79

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT------------------ 297
              V++N +I + +  G+   A  +  RM S     D F+WT                  
Sbjct: 80  --AVSWNAMIAALSDHGRVADARGLFDRMPS----RDDFSWTVMVSCYARAGELELARDV 133

Query: 298 --------------CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
                          MISG+A+NGR   A+ L +EM      P+  +  SA++  T    
Sbjct: 134 LDRMPGDKCTACYNAMISGYAKNGRFDDAVKLLREMP----APDLFSWNSALAGLTQSGQ 189

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           +   ++     V+     D++  N ++  + +  +L+AA   F  I+  +V SW +++ G
Sbjct: 190 MVRAVQFFDEMVE----KDMVSWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVTLLNG 245

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
           YC+AG    A +LF +M E     NV+  NV++ GY++    +EA  LF  M       +
Sbjct: 246 YCRAGRISDARDLFDRMPER----NVVACNVMLDGYVRLSRLEEACKLFDEM-----PGK 296

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK--E 521
           N+ SW ++I+G  + G+   A  +  KM  +C       +   L       A       E
Sbjct: 297 NSISWTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMVNDARQIFDGME 356

Query: 522 IH----------GCVLRRSLESSLPVM-----------NSLIDTYAKSGNIVYSRTIFDG 560
           +H          G V R  LE ++ +            N++I  YA+ G +  +  IF  
Sbjct: 357 VHDTVCWNTMISGYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYAQGGQMRKAIGIFRR 416

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           MS K+ ++WNS+I G+V +G +  A   F  M+    + +  T+ S + A +    + +G
Sbjct: 417 MSRKNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRACANLAALHVG 476

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
           +++   +     I  +    +A+I  Y + G++ EA +  ++M +  D   W AL+    
Sbjct: 477 RQLHSLLVRSGHINDLFAR-NALISTYAKCGRMLEAKQIFDEM-VGKDIVSWNALVDGYA 534

Query: 681 IHG 683
            +G
Sbjct: 535 SNG 537



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 147/326 (45%), Gaps = 26/326 (7%)

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V   N  +   ++  +L AA R+FD +  ++  ++NSM++   + G   +A  LF  M  
Sbjct: 18  VFRSNQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPS 77

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
                N ++WN +I+    +G   +A  LF RM   D       SW  +++ Y + G+  
Sbjct: 78  R----NAVSWNAMIAALSDHGRVADARGLFDRMPSRDDF-----SWTVMVSCYARAGELE 128

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
            A  V  +M        C    + + +     A N   +    +LR      L   NS +
Sbjct: 129 LARDVLDRMPGD----KCTACYNAMISG---YAKNGRFDDAVKLLREMPAPDLFSWNSAL 181

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
               +SG +V +   FD M  KD+++WN ++ G+V  G   AA   F +++S    PN  
Sbjct: 182 AGLTQSGQMVRAVQFFDEMVEKDMVSWNLMLEGFVRAGDLDAAASFFGRIES----PNVV 237

Query: 603 TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           ++++++  +  AG +   + +F  + E   +   +     M+D Y R  +LEEA +  ++
Sbjct: 238 SWVTLLNGYCRAGRISDARDLFDRMPERNVVACNV-----MLDGYVRLSRLEEACKLFDE 292

Query: 663 MPIEPDSSIWEALLTACRIHGNIDLA 688
           MP + +S  W  +++     G +  A
Sbjct: 293 MPGK-NSISWTTIISGLARAGKLQEA 317



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 103/191 (53%), Gaps = 4/191 (2%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFED 116
           +TY + L+AC +  ++H+ R+LH+ L     I D+F +  L+S YAKCG + +A+++F++
Sbjct: 458 STYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDE 517

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M  +++ +W+A++  Y+ + +  E + +F  M  +G+ PD+  F  IL AC   G  + G
Sbjct: 518 MVGKDIVSWNALVDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLIDEG 577

Query: 177 -KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYF 234
               +S+  +  +  V      +  +  + GKL  A    + M  + +   W +++ G  
Sbjct: 578 LGFFNSMTEEYSLKPVAEHYACMADLLGRAGKLNEAFELVQGMQIQPNAGVWGALL-GAC 636

Query: 235 QIGENDEAHRL 245
           Q+ +N E  RL
Sbjct: 637 QMYKNHELARL 647


>gi|356546772|ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
           mitochondrial-like [Glycine max]
          Length = 713

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 223/713 (31%), Positives = 387/713 (54%), Gaps = 45/713 (6%)

Query: 56  RRNTYINLLQACID----SNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAR 111
           +R T +NL Q+ ++    ++SI+   K   FL       +   T++ +   + G + +A 
Sbjct: 10  KRITKLNLFQSKLNQSHNNDSINSGGKGSKFL-------IQCNTQI-AENGRNGNVKEAE 61

Query: 112 EVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG 171
            +F  M  +N  +W+AM+ A++++ + +    LF  M Q     ++ +    ++   N G
Sbjct: 62  SIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLFDEMPQRTTVSNNAMISAYIRNGCNVG 121

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM--DEKDGVAWNSM 229
             +A +L   L  +  +S       +++  +VK GK   A + +     + +D    N++
Sbjct: 122 --KAYELFSVLAERNLVSYA-----AMIMGFVKAGKFHMAEKLYRETPYEFRDPACSNAL 174

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           I+GY ++GE +EA R+F+ M   +    VV+++ ++    + G+   A ++  RM     
Sbjct: 175 INGYLKMGEVNEALRIFENMGERD----VVSWSAMVDGLCRDGRVAAARDLFDRM----- 225

Query: 290 TPD--VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP-NGVTITSAISACTDLKALAM 346
            PD  V +W+ MI G+   G   +   LF +M   G++  N  T+T    AC +   ++ 
Sbjct: 226 -PDRNVVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACGNCGRMSE 284

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           GM+IH L  ++GF  D ++ NS+I MYS     + A++VF  + DKD+ +WNS+I+GY  
Sbjct: 285 GMQIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISGYIH 344

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM-GKNDKVKRNT 465
                 AY +F +M   DV    I+W  +I+G+ ++G  + A++LF  +  K+D V    
Sbjct: 345 NNEVEAAYRVFGRMPVKDV----ISWTAMIAGFSKSGRVENAIELFNMLPAKDDFV---- 396

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
             W ++I+G+    +   AL  + +M      PN +TI SVL A A LVA N+  +IH C
Sbjct: 397 --WTAIISGFVNNNEYEEALHWYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIHTC 454

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
           +L+ +LE +L + NSLI  Y+KSGN+V +  IF  +   ++I++NS+I G+  +GF   A
Sbjct: 455 ILKMNLEYNLSIQNSLISFYSKSGNVVDAYRIFLDVIEPNVISYNSIISGFAQNGFGDEA 514

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           L ++ +M+S G +PN  TFL+++ A + AG+VD G  +F ++   Y I P  +HY+ M+D
Sbjct: 515 LGIYKKMQSEGHEPNHVTFLAVLSACTHAGLVDEGWNIFNTMKSHYGIEPEADHYACMVD 574

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           + GR+G L+EA++ I  MP +P S +W A+L A + H  +DLA LA +R+ DLEP +   
Sbjct: 575 ILGRAGLLDEAIDLIRSMPFKPHSGVWGAILGASKTHLRLDLAKLAAQRITDLEPKNATP 634

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS 758
             ++  +Y+  GK  D   V+  +     + S G  WI +KN V+ F+ G  S
Sbjct: 635 YVVLSNMYSAAGKKIDGDLVKMAKNLKGIKKSPGCSWITMKNKVHLFLAGDQS 687



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 146/527 (27%), Positives = 251/527 (47%), Gaps = 55/527 (10%)

Query: 17  TKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIH 74
           T  SN      ++   C  G+  E  +VL           RN  +Y  ++   + +   H
Sbjct: 102 TTVSNNAMISAYIRNGCNVGKAYELFSVL---------AERNLVSYAAMIMGFVKAGKFH 152

Query: 75  LARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
           +A KL+         D      L++ Y K G +++A  +FE+M ER++ +WSAM+    R
Sbjct: 153 MAEKLYRETPYEFR-DPACSNALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCR 211

Query: 135 DQRWREVVELFFLM---------------VQDGLFPDDF-LFPK---------------- 162
           D R     +LF  M               + +G F + F LF                  
Sbjct: 212 DGRVAAARDLFDRMPDRNVVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTI 271

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           + +ACGNCG    G  +H LV +LG      + NSV+ +Y   G    A + F ++ +KD
Sbjct: 272 MFKACGNCGRMSEGMQIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKD 331

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVK 282
            V WNS+ISGY    E + A+R+F +M  ++    V+++  +I  +++ G+ + A+E+  
Sbjct: 332 IVTWNSLISGYIHNNEVEAAYRVFGRMPVKD----VISWTAMIAGFSKSGRVENAIELFN 387

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
            + +     D F WT +ISGF  N    +AL  +  M + G  PN +TI+S ++A   L 
Sbjct: 388 MLPA----KDDFVWTAIISGFVNNNEYEEALHWYARMIWEGCKPNPLTISSVLAASAALV 443

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           AL  G++IH+  +KM    ++ + NSLI+ YSK   +  A R+F  + + +V S+NS+I+
Sbjct: 444 ALNEGLQIHTCILKMNLEYNLSIQNSLISFYSKSGNVVDAYRIFLDVIEPNVISYNSIIS 503

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
           G+ Q G+  +A  ++ KMQ     PN +T+  ++S     G  DE  ++F  M  +  ++
Sbjct: 504 GFAQNGFGDEALGIYKKMQSEGHEPNHVTFLAVLSACTHAGLVDEGWNIFNTMKSHYGIE 563

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
                +  ++    + G  + A+ + R M    F P+     ++L A
Sbjct: 564 PEADHYACMVDILGRAGLLDEAIDLIRSMP---FKPHSGVWGAILGA 607


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 207/634 (32%), Positives = 328/634 (51%), Gaps = 42/634 (6%)

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           G  + A ++  +M++    PD F    MI G+A++    +A+ L+  M   GV  +  T 
Sbjct: 59  GDLNYARKLFTQMQN----PDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTY 114

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
              ++AC  L A+ +G   H   +K GF  D+ V N+LI  Y  C     A  VFD    
Sbjct: 115 PFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTV 174

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD-VPPNVITWNVLISGYIQNGNEDEAVD 450
           +DV +WN MI  +   G   KA++L  +M + D + P+ +T   L+    Q GN +    
Sbjct: 175 RDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKF 234

Query: 451 LF---QRMGKNDKVKRNTA---------------------------SWNSLIAGYQQLGQ 480
           L    + +G ++ ++ N A                           SW S+++G  + G 
Sbjct: 235 LHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGY 294

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
              AL +F+KMQ +    + +T++ VL ACA   A ++ K IH  + +  +   L +  +
Sbjct: 295 FQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETA 354

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           L+D YAK G+I  +  +F  M  +++ TWN+LI G  +HG    A+ LFDQM+   L P+
Sbjct: 355 LVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPD 414

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
             TF++++ A S AG+VD G  +F ++   +QI P +EHY  ++DL  R+ K+++A+ FI
Sbjct: 415 DVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFI 474

Query: 661 EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
           E+MPI+ +S +W  LL ACR  G+ DLA     R+ +LEP       ++  +YA   + +
Sbjct: 475 ENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWD 534

Query: 721 DALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS 780
            ALK+RK  +      + G  WIE+  +++ FV G  S   ++ +Y+ ++ +   V    
Sbjct: 535 HALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVNLDG 594

Query: 781 SHSG------LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHET 834
            H          IEEEEKE    +HSEKLA+A  LI S+ +   IRIVKN+R+C  CH  
Sbjct: 595 GHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLI-STPSGSPIRIVKNLRVCNDCHSF 653

Query: 835 AKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            K  S +++ EI   D    HHFK G CSC D+W
Sbjct: 654 LKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 224/475 (47%), Gaps = 40/475 (8%)

Query: 72  SIHLARKLHAFLNLVTEI--DVFVKTKLLSVYA--KCGCLDDAREVFEDMRERNLYTWSA 127
           SI   ++ HA L L T +  +    +KL+S  A    G L+ AR++F  M+  + +  + 
Sbjct: 23  SISKTKQAHALL-LRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNT 81

Query: 128 MIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
           MI  Y+R Q   E V L++ MV+ G+  D++ +P +L AC   G  + G+  H  V+K G
Sbjct: 82  MIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNG 141

Query: 188 MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
                 V N+++  Y  CG    A   F+    +D V WN MI+ +   G +++A  L D
Sbjct: 142 FGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLD 201

Query: 248 KMCR-EEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI----------------- 289
           +M + + ++   VT   L+ +  QLG  +    +    + LG+                 
Sbjct: 202 EMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKC 261

Query: 290 --------------TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
                           DV +WT M+SG A++G   +AL LF++M    +  + +T+   +
Sbjct: 262 DDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVL 321

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
           SAC    AL  G  IH L  K     D+++  +L++MY+KC  ++ A +VF  ++ ++V+
Sbjct: 322 SACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVF 381

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           +WN++I G    G+   A  LF +M+   + P+ +T+  L+      G  DE + +FQ M
Sbjct: 382 TWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAM 441

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
               +++     +  ++    +  + ++AL     M       N V   ++L AC
Sbjct: 442 KNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMP---IKANSVLWATLLGAC 493



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 157/337 (46%), Gaps = 41/337 (12%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL 98
           EA+++   +  +G  V   TY  +L AC    ++ L R+ H   L      D+FV   L+
Sbjct: 94  EAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALI 153

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ-DGLFPDD 157
             Y  CG    A +VF++   R++ TW+ MI A+       +  +L   M + D L PD+
Sbjct: 154 QFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDE 213

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
                ++ AC   G+ E GK +HS   +LG+    RV N++L +Y KC  +  A+  F  
Sbjct: 214 VTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNR 273

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT----------------- 260
           + EKD ++W SM+SG  + G   EA  LF KM   +I+L  +T                 
Sbjct: 274 IREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQG 333

Query: 261 ---------FNI---------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
                    F I         L+  Y + G  D+A+++ +RM       +VFTW  +I G
Sbjct: 334 KYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMR----VRNVFTWNALIGG 389

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
            A +G    A+ LF +M    +MP+ VT  + + AC+
Sbjct: 390 LAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACS 426



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 142/282 (50%), Gaps = 5/282 (1%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLN-LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T ++L+ AC    ++   + LH++   L  + ++ V   +L +Y KC  ++ A+EVF  +
Sbjct: 215 TMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRI 274

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
           RE+++ +W++M+   ++   ++E + LF  M  + +  D+     +L AC   G  + GK
Sbjct: 275 REKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGK 334

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H L+ K  ++C   +  +++ +Y KCG +  A + F  M  ++   WN++I G    G
Sbjct: 335 YIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHG 394

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTW 296
             ++A  LFD+M  +++    VTF  L+ + +  G  D  + M + M++   I P +  +
Sbjct: 395 HGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHY 454

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
            C++    +  +   AL   + M    +  N V   + + AC
Sbjct: 455 GCVVDLLCRARKVDDALAFIENMP---IKANSVLWATLLGAC 493



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 143/307 (46%), Gaps = 20/307 (6%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-LVT 87
           L  L  +G   EA+ +   +     ++   T + +L AC  + ++   + +H  ++    
Sbjct: 286 LSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEI 345

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
             D+ ++T L+ +YAKCG +D A +VF  MR RN++TW+A+IG  +      + + LF  
Sbjct: 346 NCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQ 405

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLM-HSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M  D L PDD  F  +L AC + G  + G  M  ++  K  +         V+ +  +  
Sbjct: 406 MEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRAR 465

Query: 207 KLIWARRFFESMDEK-DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL---GVVTFN 262
           K+  A  F E+M  K + V W +++      G  D    L +K+ R  I+L       + 
Sbjct: 466 KVDDALAFIENMPIKANSVLWATLLGACRSGGHFD----LAEKIGRRVIELEPDSCGRYV 521

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGI--TPDVFTW---TCMISGFAQNGR----TSQAL 313
           +L   Y  + Q D A+++ K+M++ GI  TP   +W     MI  F    R    T Q  
Sbjct: 522 MLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGC-SWIELNGMIHQFVAGDRSHLQTEQIY 580

Query: 314 DLFKEMS 320
            + +EM+
Sbjct: 581 AMIEEMT 587



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/271 (21%), Positives = 118/271 (43%), Gaps = 41/271 (15%)

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY---AKSGNIVYSRT 556
           C  ++SV     +  + +K K+ H  +LR  L  + P+ +S + ++   + SG++ Y+R 
Sbjct: 8   CTKLISVDFLKTHCTSISKTKQAHALLLRTHLLHN-PLFSSKLISFLALSHSGDLNYARK 66

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           +F  M + D    N++I GY      + A+ L+  M   G+  +  T+  ++ A +  G 
Sbjct: 67  LFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGA 126

Query: 617 VDLGKKVFCSI------TECYQIIPMIEHY------------------------SAMIDL 646
           V LG++  C +      ++ + I  +I+ Y                        + MI+ 
Sbjct: 127 VKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINA 186

Query: 647 YGRSGKLEEAMEFIEDMP----IEPDSSIWEALLTACRIHGNIDLAVL--AIERLFDLEP 700
           +   G  E+A + +++M     + PD     +L+ AC   GN++      +  +   L+ 
Sbjct: 187 HLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDE 246

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERE 731
            ++ +   IL +Y  C   E A +V    RE
Sbjct: 247 -NLRVNNAILDMYCKCDDIESAQEVFNRIRE 276


>gi|359486044|ref|XP_002269662.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Vitis vinifera]
          Length = 689

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 204/617 (33%), Positives = 313/617 (50%), Gaps = 57/617 (9%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA---LDLFKEMS 320
           ++  Y   G  D A+ +  R+++    P    +  +I  + ++G        L+ +  M 
Sbjct: 118 MVAMYASSGDLDSAVVVFDRIDN----PSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMH 173

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
           F+G++ +  T+   + +C DL  + MG  +H   +++G   D  VG SLI+MY KC    
Sbjct: 174 FLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKC---- 229

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
                                      G  G A +LF KM   D+     +WN LI+GY+
Sbjct: 230 ---------------------------GVIGDARKLFDKMIVRDMA----SWNALIAGYM 258

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM--QSSCFYP 498
           + G    A DLF+RM       RN  SW ++I+GY Q G    ALG+F +M    S   P
Sbjct: 259 KEGEIGVAEDLFERMEH-----RNIVSWTAMISGYTQNGFAEQALGLFDEMLQDGSEMKP 313

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           N VTI+SVLPACA   A  + + IH       L  +  V  +L   YAK  ++V +R  F
Sbjct: 314 NWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCF 373

Query: 559 D--GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           D    + K++I WN++I  Y  HG    A+ +F+ M   G++P+  TF+ ++   S +G+
Sbjct: 374 DMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGL 433

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           +D G   F  +   + + P +EHY+ ++DL GR+G+L EA E I  MP++   S+W ALL
Sbjct: 434 IDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAGPSVWGALL 493

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
            ACR H N+++A LA  RLF LEP +     L+  +YA  G  E+  K+R L +    + 
Sbjct: 494 AACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRALLKYQGMKK 553

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT-----ARSSHSGLCIEEEE 791
           S G  WIE+    + F+    S   +  +Y +L+ +PE +        +S     I EEE
Sbjct: 554 SPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFVLHDISEEE 613

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           KE     HSEKLA+AF L+ +      +R+ KN+R+C  CH   K++S ++  EI + D 
Sbjct: 614 KEYNLTTHSEKLAIAFGLLNTRPGV-VLRVTKNLRICGDCHAATKFISKIYEREIIVRDL 672

Query: 852 KCLHHFKNGQCSCGDYW 868
              H FK+G CSCGDYW
Sbjct: 673 NRFHCFKDGSCSCGDYW 689



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 193/413 (46%), Gaps = 47/413 (11%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNL-VTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           ++Y  + Q     N I L ++ HA + L   + + F+  K++++YA  G LD A  VF+ 
Sbjct: 78  SSYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDR 137

Query: 117 MRERNLYTWSAMIGAYSRD---QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF 173
           +   +   ++++I AY+R          +E +  M   GL  D+F  P +L++C +    
Sbjct: 138 IDNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRV 197

Query: 174 EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
             G+ +H   +++G+     V  S++ +YVKCG +  AR+ F+ M  +D  +WN++I+GY
Sbjct: 198 CMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRDMASWNALIAGY 257

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
            + GE   A  LF++M    I    V++  +I  Y                         
Sbjct: 258 MKEGEIGVAEDLFERMEHRNI----VSWTAMISGYT------------------------ 289

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVG--VMPNGVTITSAISACTDLKALAMGMEIH 351
                      QNG   QAL LF EM   G  + PN VTI S + AC    AL  G  IH
Sbjct: 290 -----------QNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIH 338

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD--KDVYSWNSMIAGYCQAGY 409
             A  +G   +  V  +L  MY+KC  L  A   FDMI    K++ +WN+MI  Y   G 
Sbjct: 339 DFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGC 398

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
             +A  +F  M  + V P+ +T+  L+SG   +G  D  ++ F  MG    V+
Sbjct: 399 GVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDAGLNHFNDMGTIHSVE 451



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 136/331 (41%), Gaps = 76/331 (22%)

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA-- 484
           PN      +++ Y  +G+ D AV +F R+     +      +NS+I  Y + G       
Sbjct: 110 PNAFLAAKMVAMYASSGDLDSAVVVFDRIDNPSSLL-----YNSIIRAYTRHGXXXXXXX 164

Query: 485 -LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID 543
            L  + +M       +  T+  VL +CA L      + +HG  LR  LE    V  SLID
Sbjct: 165 XLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLID 224

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV-------------------------- 577
            Y K G I  +R +FD M  +D+ +WN+LI GY+                          
Sbjct: 225 MYVKCGVIGDARKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAM 284

Query: 578 -----LHGFWHAALDLFDQMKSFG--LKPNRGTFLSIILAHSLAGMVDLGKKV--FCS-- 626
                 +GF   AL LFD+M   G  +KPN  T +S++ A + +  ++ G+++  F +  
Sbjct: 285 ISGYTQNGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGI 344

Query: 627 ---------------ITECYQIIP------MIEH-------YSAMIDLYGRSGKLEEAME 658
                            +CY ++       MI         ++ MI  Y   G   EA+ 
Sbjct: 345 GLHLNSSVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVS 404

Query: 659 FIEDM---PIEPDSSIWEALLTACRIHGNID 686
             E+M    ++PD+  +  LL+ C   G ID
Sbjct: 405 IFENMLRAGVQPDAVTFMGLLSGCSHSGLID 435



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 90/199 (45%), Gaps = 12/199 (6%)

Query: 505 SVLPACAYLVASNKVK---EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           S  P   +L   N +K   + H  ++   L+ +  +   ++  YA SG++  +  +FD +
Sbjct: 79  SYAPIFQFLTRHNFIKLGQQAHAQIVLHGLQPNAFLAAKMVAMYASSGDLDSAVVVFDRI 138

Query: 562 SSKDIITWNSLICGYVLHG---FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
            +   + +NS+I  Y  HG        L+ + +M   GL  +  T   ++ + +    V 
Sbjct: 139 DNPSSLLYNSIIRAYTRHGXXXXXXXXLEAYARMHFLGLLGDNFTLPFVLKSCADLSRVC 198

Query: 619 LGKKVFCSITECYQIIPMIEHY--SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           +G+   C   +  ++    + Y  +++ID+Y + G + +A +  + M +  D + W AL+
Sbjct: 199 MGR---CVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVR-DMASWNALI 254

Query: 677 TACRIHGNIDLAVLAIERL 695
                 G I +A    ER+
Sbjct: 255 AGYMKEGEIGVAEDLFERM 273


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  332 bits (851), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 205/654 (31%), Positives = 336/654 (51%), Gaps = 46/654 (7%)

Query: 256  LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
            L ++T N LI  Y +  +  +A ++   M       +V +W+ ++SG   NG    +L L
Sbjct: 410  LNLITSNYLIDMYCKCREPLMAYKVFDSMPE----RNVVSWSALMSGHVLNGDLKGSLSL 465

Query: 316  FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
            F EM   G+ PN  T ++ + AC  L AL  G++IH   +K+GF   V VGNSL++MYSK
Sbjct: 466  FSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 525

Query: 376  CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP--PNVITWN 433
            C  +  AE+VF  I D+ + SWN+MIAG+  AGY  KA + F  MQE+++   P+  T  
Sbjct: 526  CGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLT 585

Query: 434  VLI-----SGYIQNGNE-------------------DEAVDLFQRMG-------KNDKVK 462
             L+     +G I  G +                      VDL+ + G         D++K
Sbjct: 586  SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK 645

Query: 463  RNTA-SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
              T  SW+SLI GY Q G+   A+G+F+++Q      +   + S++   A      + K+
Sbjct: 646  EKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQ 705

Query: 522  IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
            +    ++        V+NS++D Y K G +  +   F  M  KD+I+W  +I GY  HG 
Sbjct: 706  MQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGL 765

Query: 582  WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
               ++ +F +M    ++P+   +L+++ A S +GM+  G+++F  + E + I P +EHY+
Sbjct: 766  GKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYA 825

Query: 642  AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
             ++DL GR+G+L+EA   I+ MPI+P+  IW+ LL+ CR+HG+I+L     + L  ++  
Sbjct: 826  CVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAK 885

Query: 702  DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
            +     ++  +Y   G   +    R+L      +   G  W+E++  V+ F +G  S   
Sbjct: 886  NPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPL 945

Query: 762  SDLLYSWLQNVPENVTARSS------HSGLCIEEEEKEEISGIHSEKLALAFALI--GSS 813
            + ++   L+     +           H    I++E KEE    HSEKLA+  AL   G +
Sbjct: 946  TPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLN 1005

Query: 814  QAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
            Q   TIR+ KN+R+CV CHE  K +S +      + D+   H F++G CSCGDY
Sbjct: 1006 QKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 118/482 (24%), Positives = 219/482 (45%), Gaps = 44/482 (9%)

Query: 82  FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           +LNL+T         L+ +Y KC     A +VF+ M ERN+ +WSA++  +  +   +  
Sbjct: 409 WLNLIT------SNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGS 462

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
           + LF  M + G++P++F F   L+ACG     E G  +H   +K+G   +  V NS++ +
Sbjct: 463 LSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDM 522

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           Y KCG++  A + F  + ++  ++WN+MI+G+   G   +A   F  M    IK     F
Sbjct: 523 YSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEF 582

Query: 262 NI--LIRSYNQLG-----------------QCDVAMEMVKRMESLGIT------------ 290
            +  L+++ +  G                  C  +  +   +  L +             
Sbjct: 583 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 642

Query: 291 ----PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
                 + +W+ +I G+AQ G   +A+ LFK +  +    +   ++S I    D   L  
Sbjct: 643 QIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQ 702

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G ++ +LAVK+    +  V NS+++MY KC  ++ AE+ F  ++ KDV SW  +I GY +
Sbjct: 703 GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 762

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
            G   K+  +F +M   ++ P+ + +  ++S    +G   E  +LF ++ +   +K    
Sbjct: 763 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 822

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
            +  ++    + G+   A  +   M      PN     ++L  C         KE+   +
Sbjct: 823 HYACVVDLLGRAGRLKEAKHLIDTMP---IKPNVGIWQTLLSLCRVHGDIELGKEVGKIL 879

Query: 527 LR 528
           LR
Sbjct: 880 LR 881



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 198/409 (48%), Gaps = 44/409 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG L  ++++   +  QG      T+   L+AC   N++    ++H F L +  E+ V V
Sbjct: 456 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 515

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y+KCG +++A +VF  + +R+L +W+AMI  +       + ++ F +M +  +
Sbjct: 516 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 575

Query: 154 --FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR--VRNSVLAVYVKCGKLI 209
              PD+F    +L+AC + G   AGK +H  +++ G  C     +  S++ +YVKCG L 
Sbjct: 576 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 635

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK-----------LGV 258
            AR+ F+ + EK  ++W+S+I GY Q GE  EA  LF ++  +E+            +GV
Sbjct: 636 SARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL--QELNSQIDSFALSSIIGV 693

Query: 259 VTFNILIRSYNQLG-----------------------QCDVAMEMVKRMESLGITPDVFT 295
                L+R   Q+                        +C +  E  K    + +  DV +
Sbjct: 694 FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLK-DVIS 752

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS-LA 354
           WT +I+G+ ++G   +++ +F EM    + P+ V   + +SAC+    +  G E+ S L 
Sbjct: 753 WTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLL 812

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIA 402
              G    V     ++++  +   L+ A+ + D +  K +V  W ++++
Sbjct: 813 ETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 861



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 147/303 (48%), Gaps = 7/303 (2%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           T  +LL+AC  +  I+  +++H FL            +   L+ +Y KCG L  AR+ F+
Sbjct: 583 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 642

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            ++E+ + +WS++I  Y+++  + E + LF  + +     D F    I+    +      
Sbjct: 643 QIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQ 702

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           GK M +L +KL       V NSV+ +Y+KCG +  A + F  M  KD ++W  +I+GY +
Sbjct: 703 GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 762

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMV-KRMESLGITPDVF 294
            G   ++ R+F +M R  I+   V +  ++ + +  G      E+  K +E+ GI P V 
Sbjct: 763 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 822

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
            + C++    + GR  +A  L   M    + PN     + +S C     + +G E+  + 
Sbjct: 823 HYACVVDLLGRAGRLKEAKHLIDTMP---IKPNVGIWQTLLSLCRVHGDIELGKEVGKIL 879

Query: 355 VKM 357
           +++
Sbjct: 880 LRI 882


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  332 bits (851), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 199/578 (34%), Positives = 300/578 (51%), Gaps = 37/578 (6%)

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P      + I+AC   K L    +IH       F  D  + NSLI++Y KC  +  A +V
Sbjct: 49  PTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKV 108

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI---SGYIQN 442
           FD ++ KD+ SW S+IAGY Q     +A  L   M +    PN  T+  L+     Y  +
Sbjct: 109 FDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168

Query: 443 G--------------NEDEAV-----DLFQRMGKNDKV--------KRNTASWNSLIAGY 475
           G              +ED  V     D++ R GK D           +N  SWN+LI+G+
Sbjct: 169 GIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
            + G    AL VF +MQ + F     T  S+    A + A  + K +H  +++   + + 
Sbjct: 229 ARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTA 288

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            V N+++D YAKSG+++ +R +F+ + +KD++TWNS++  +  +G    A+  F++M+  
Sbjct: 289 FVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKS 348

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           G+  N+ TFL I+ A S  G+V  GK  F  I E Y + P IEHY  ++DL GR+G L  
Sbjct: 349 GIYLNQITFLCILTACSHGGLVKEGKHYFDMIKE-YNLEPEIEHYVTVVDLLGRAGLLNY 407

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A+ FI  MP+EP +++W ALL ACR+H N  +   A + +F L+P D     L+  IYA 
Sbjct: 408 ALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNIYAS 467

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP-- 773
            G  + A +VRK+ +    +      W+E+ N V+ FV    +   ++ +Y     +   
Sbjct: 468 TGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPRAEEIYKMWDEISMK 527

Query: 774 ---ENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
              E       +  L ++E+E+E     HSEK+ALAFALI    A  TIRI+KNIR+C  
Sbjct: 528 IRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALI-QMPAGATIRIMKNIRICGD 586

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   KY+S +   EI + D+   HHF NG CSCGDYW
Sbjct: 587 CHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 207/447 (46%), Gaps = 44/447 (9%)

Query: 60  YINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           Y   + AC  S ++  ARK+H  L +   E D F+   L+ +Y KCG + +A +VF+ MR
Sbjct: 54  YHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMR 113

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           ++++ +W+++I  Y+++    E + L   M++    P+ F F  +L+A G   D   G  
Sbjct: 114 KKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQ 173

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H+L +K        V +++L +Y +CGK+  A   F+ +D K+GV+WN++ISG+ + G+
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGD 233

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD----VAMEMVKRMESLG------ 288
            + A  +F +M R   +    T++ +      +G  +    V   MVK  + L       
Sbjct: 234 GETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNT 293

Query: 289 ---------------------ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
                                +  D+ TW  M++ FAQ G   +A+  F+EM   G+  N
Sbjct: 294 MLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLN 353

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE-AAERVF 386
            +T    ++AC+    +  G     +  +     ++    +++++  +   L  A   +F
Sbjct: 354 QITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIF 413

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGK----AYELFIKMQESDVPPNVITWNVLISGYIQN 442
            M  +     W +++A  C+     K    A +   ++   D  P V+ +N+    Y   
Sbjct: 414 KMPMEPTAAVWGALLAA-CRMHKNAKVGQFAADHVFQLDPDDSGPPVLLYNI----YAST 468

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTA-SW 468
           G+ D A  + ++M K   VK+  A SW
Sbjct: 469 GHWDAAARV-RKMMKATGVKKEPACSW 494



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 184/411 (44%), Gaps = 47/411 (11%)

Query: 226 WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME 285
           +++ I+   Q    D+A ++   +     +      N LI  Y + G    A ++  +M 
Sbjct: 54  YHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKVFDKMR 113

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
                 D+ +WT +I+G+AQN   ++A+ L   M      PNG T  S + A        
Sbjct: 114 K----KDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSG 169

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
           +G +IH+LAVK  + +DV VG++L++MY++C +++ A  VFD +  K+  SWN++I+G+ 
Sbjct: 170 IGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFA 229

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITWNVLISG--------------------------- 438
           + G    A  +F +MQ +       T++ + SG                           
Sbjct: 230 RKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAF 289

Query: 439 --------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
                   Y ++G+  +A  +F+R+   D V     +WNS++  + Q G    A+  F +
Sbjct: 290 VGNTMLDMYAKSGSMIDARKVFERVLNKDLV-----TWNSMLTAFAQYGLGKEAVSHFEE 344

Query: 491 MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGN 550
           M+ S  Y N +T L +L AC++     + K     +   +LE  +    +++D   ++G 
Sbjct: 345 MRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAGL 404

Query: 551 IVYSRT-IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
           + Y+   IF          W +L+    +H   +A +  F     F L P+
Sbjct: 405 LNYALVFIFKMPMEPTAAVWGALLAACRMHK--NAKVGQFAADHVFQLDPD 453



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 161/356 (45%), Gaps = 5/356 (1%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLL 98
           EAI +L  +     K    T+ +LL+A        +  ++HA  +      DV+V + LL
Sbjct: 135 EAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALL 194

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +YA+CG +D A  VF+ +  +N  +W+A+I  ++R       + +F  M ++G     F
Sbjct: 195 DMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHF 254

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
            +  I       G  E GK +H+ ++K        V N++L +Y K G +I AR+ FE +
Sbjct: 255 TYSSIFSGLAGIGALEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERV 314

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
             KD V WNSM++ + Q G   EA   F++M +  I L  +TF  ++ + +  G      
Sbjct: 315 LNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGK 374

Query: 279 EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
                ++   + P++  +  ++    + G  + AL    +M    + P      + ++AC
Sbjct: 375 HYFDMIKEYNLEPEIEHYVTVVDLLGRAGLLNYALVFIFKMP---MEPTAAVWGALLAAC 431

Query: 339 TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
              K   +G        ++   DD      L N+Y+     +AA RV  M+K   V
Sbjct: 432 RMHKNAKVGQFAADHVFQLD-PDDSGPPVLLYNIYASTGHWDAAARVRKMMKATGV 486


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  332 bits (850), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 207/628 (32%), Positives = 322/628 (51%), Gaps = 58/628 (9%)

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           V++W  +I+ FA++G + QAL  F  M  + + PN  T    I +C+ L  L  G +IH 
Sbjct: 51  VYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQ 110

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
            A   G+  D+ V ++LI+MYSKC  L  A ++FD I +++V SW SMI+GY Q     +
Sbjct: 111 QAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERARE 170

Query: 413 A---YELFIKMQESD-------------------------VPPNVIT------------- 431
           A   ++ F+ + E+D                         V    +T             
Sbjct: 171 AVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFE 230

Query: 432 -----WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALG 486
                 N L+  Y + G    +  +F  M + D       SWNSLIA Y Q G    A  
Sbjct: 231 GCLAVGNTLMDAYAKCGEISVSRKVFDGMEETD-----VCSWNSLIAVYAQNGLSVEAFS 285

Query: 487 VFRKM-QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
           +F  M +      N VT+ +VL ACA+  A    K IH  V++  LE +L V  S++D Y
Sbjct: 286 LFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMY 345

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
            K G +  +R  FD +  K++ +W  ++ GY +HG    A+ +F +M   G+KPN  TF+
Sbjct: 346 CKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFV 405

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
           S++ A S AG++  G   F  +   + + P IEHYS M+DL GR+G L+EA   I++M +
Sbjct: 406 SVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKV 465

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
           +PD  +W +LL ACRIH N++L  ++  +LF L+P +     L+  IYA  G+ +D  ++
Sbjct: 466 KPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERM 525

Query: 726 RKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGL 785
           R L + +    + G   +E K  V+ F+ G       + +Y +L  +   +        +
Sbjct: 526 RILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNV 585

Query: 786 C-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSM 840
                 ++ EEK  +  +HSEKLA+AF ++ S      I+I+KN+R+C  CH   K +S 
Sbjct: 586 TSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGS-VIQIIKNLRICGDCHFAIKLISK 644

Query: 841 MHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           + + EI + DSK  HHFK+G CSCGDYW
Sbjct: 645 IVNREIVIRDSKRFHHFKDGLCSCGDYW 672



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 207/437 (47%), Gaps = 54/437 (12%)

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           ++Y+W+++I  ++R     + +  F  M +  L P+   FP  +++C +  D  AGK +H
Sbjct: 50  SVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIH 109

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
                 G      V ++++ +Y KCG L  AR+ F+ + E++ V+W SMISGY Q     
Sbjct: 110 QQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAR 169

Query: 241 EAHRLF------DKMCREEIK----------LGVV------------------------- 259
           EA  LF      D+   +EI           LG V                         
Sbjct: 170 EAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGF 229

Query: 260 -----TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
                  N L+ +Y + G+  V+ ++   ME      DV +W  +I+ +AQNG + +A  
Sbjct: 230 EGCLAVGNTLMDAYAKCGEISVSRKVFDGMEE----TDVCSWNSLIAVYAQNGLSVEAFS 285

Query: 315 LFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
           LF +M   G V  N VT+++ + AC    AL +G  IH   VKM   D+++VG S+++MY
Sbjct: 286 LFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMY 345

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
            KC  +E A + FD +K K+V SW  M+AGY   G+  +A ++F +M    + PN IT+ 
Sbjct: 346 CKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFV 405

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
            +++     G   E    F +M     V+     ++ ++    + G    A G+ ++M+ 
Sbjct: 406 SVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKV 465

Query: 494 SCFYPNCVTILSVLPAC 510
               P+ +   S+L AC
Sbjct: 466 K---PDFIVWGSLLGAC 479



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 208/444 (46%), Gaps = 79/444 (17%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH--AFLNLVTEIDVFVKTKL 97
           +A+    S+        R+T+   +++C     +   +++H  AF+      D+FV + L
Sbjct: 69  QALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFV-FGYGSDIFVASAL 127

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF--FLMVQDGLFP 155
           + +Y+KCG L+DAR++F+++ ERN+ +W++MI  Y +++R RE V LF  FL+V +  + 
Sbjct: 128 IDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYD 187

Query: 156 ---------DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
                    D  L   ++ AC         + +H L +K G      V N+++  Y KCG
Sbjct: 188 EIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCG 247

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC-REEIKLGVVTFNILI 265
           ++  +R+ F+ M+E D  +WNS+I+ Y Q G + EA  LF  M  R E++   VT + ++
Sbjct: 248 EISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVL 307

Query: 266 RSYN-----QLGQC---------------------DV-----AMEMVKRMESLGITPDVF 294
            +       Q+G+C                     D+      +EM ++        +V 
Sbjct: 308 LACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVK 367

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +WT M++G+  +G   +A+ +F EM   G+ PN +T  S ++AC+    L  G    +  
Sbjct: 368 SWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFN-- 425

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
            KM                 KCE        FD+  +  +  ++ M+    +AGY  +AY
Sbjct: 426 -KM-----------------KCE--------FDV--EPGIEHYSCMVDLLGRAGYLKEAY 457

Query: 415 ELFIKMQESDVPPNVITWNVLISG 438
            L   +QE  V P+ I W  L+  
Sbjct: 458 GL---IQEMKVKPDFIVWGSLLGA 478



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 169/363 (46%), Gaps = 34/363 (9%)

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V   L+  YAKCG +  +R+VF+ M E ++ +W+++I  Y+++    E   LF  MV+ G
Sbjct: 235 VGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRG 294

Query: 153 -LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            +  +      +L AC + G  + GK +H  V+K+ +     V  S++ +Y KCG++  A
Sbjct: 295 EVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMA 354

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R+ F+ +  K+  +W  M++GY   G   EA ++F +M R  IK   +TF  ++ + +  
Sbjct: 355 RKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHA 414

Query: 272 GQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G          +M+    + P +  ++CM+    + G   +A  L +EM    V P+ + 
Sbjct: 415 GLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMK---VKPDFIV 471

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDM 388
             S + AC   K + +G EI   A K+   D    G  ++  N+Y+     +  ER+  +
Sbjct: 472 WGSLLGACRIHKNVELG-EIS--ARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRIL 528

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAY--------------------ELFIKMQESDVPPN 428
           +K+  +        GY    + G+ +                    EL +K+QE    PN
Sbjct: 529 MKNHGLLK----TPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPN 584

Query: 429 VIT 431
           V +
Sbjct: 585 VTS 587



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 141/325 (43%), Gaps = 57/325 (17%)

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
           K +  SWNS+IA + + G    AL  F  M+    +PN  T    + +C+ L      K+
Sbjct: 48  KTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQ 107

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           IH         S + V ++LID Y+K G +  +R +FD +  +++++W S+I GYV +  
Sbjct: 108 IHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNER 167

Query: 582 WHAALDLFDQ-----------------------------------MKSF-----GLKPNR 601
              A+ LF +                                   +KS      GL   +
Sbjct: 168 AREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKK 227

Query: 602 G------TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           G         +++ A++  G + + +KVF  + E       +  ++++I +Y ++G   E
Sbjct: 228 GFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEE-----TDVCSWNSLIAVYAQNGLSVE 282

Query: 656 AMEFIEDM----PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD-VLIQRLIL 710
           A     DM     +  ++    A+L AC   G + +     +++  +E  D +++   I+
Sbjct: 283 AFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIV 342

Query: 711 QIYAICGKPEDALKV-RKLERENTR 734
            +Y  CG+ E A K   +L+R+N +
Sbjct: 343 DMYCKCGRVEMARKAFDRLKRKNVK 367


>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  332 bits (850), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 189/572 (33%), Positives = 322/572 (56%), Gaps = 27/572 (4%)

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           K GK+  AR+ FE M ++D V+W ++I+GY + G  +EA  LFD   R +    VVT+  
Sbjct: 78  KEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFD---RNDAIKNVVTWTA 134

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+  Y +  + + A  +   M       +V +W  MI G+A+ G   QALDLF++M    
Sbjct: 135 LVSGYVRWNRIEEARRLFDAMP----VKNVISWNTMIEGYARKGWIDQALDLFEKMP--- 187

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
              N V+  + I+A    + +    E+ +   +     DV+   +++   SK   ++ A 
Sbjct: 188 -ERNVVSWNTVITAFMQRRRVDEAQELFNRMPER----DVISWTTMVAGLSKNGRIDDAR 242

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
            +FD +  ++V SWN+MI GY Q     +A++LF +M E ++     +WN +I+G+IQNG
Sbjct: 243 LLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELS----SWNTMITGFIQNG 298

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC-FYPNCVT 502
             + AVD F +M       +N  +W ++I+G+ Q G+   AL +F +MQ++    PN  T
Sbjct: 299 KLERAVDFFYKMSN-----KNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGT 353

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD--G 560
            +SVL AC+ L A  + ++IH  + +   +    V+++LI+ Y+K G +  +R IFD   
Sbjct: 354 FVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGS 413

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           +  +D+++WN +I  Y  HG  H A+ LFD+M++ G +P+  T+++++ A S AG+VD G
Sbjct: 414 IGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEG 473

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
            K+F ++     I    +H++ ++DL+GR+G+L+EA +FI+ + ++P +S+W ALL  C 
Sbjct: 474 LKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCN 533

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           +HG+IDL  L  E+L + EP +     ++  IYA  GK  +A  VR   ++   +   G 
Sbjct: 534 VHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGC 593

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
            WIEV N V+ FV G  S    + +Y  L ++
Sbjct: 594 SWIEVGNTVHVFVVGDNSHREFENIYLLLHDL 625



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 218/424 (51%), Gaps = 22/424 (5%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           +V   T L+S Y +   +++AR +F+ M  +N+ +W+ MI  Y+R     + ++LF  M 
Sbjct: 128 NVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEKMP 187

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           +  +   + +    +Q        EA +L + +  +  +S       +++A   K G++ 
Sbjct: 188 ERNVVSWNTVITAFMQ---RRRVDEAQELFNRMPERDVISWT-----TMVAGLSKNGRID 239

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            AR  F+ M  ++ V+WN+MI GY Q    DEA +LF++M   E+     ++N +I  + 
Sbjct: 240 DARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELS----SWNTMITGFI 295

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV-GVMPNG 328
           Q G+ + A++   +M +     +V TWT +ISG  Q+GR+ +AL +F EM     V PN 
Sbjct: 296 QNGKLERAVDFFYKMSN----KNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNE 351

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD- 387
            T  S + AC+ L AL  G +IH +  K  + +   V ++LINMYSKC ELE A ++FD 
Sbjct: 352 GTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDD 411

Query: 388 -MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
             I  +DV SWN MIA Y   G+  KA  LF +MQ     P+ +T+  L+S     G  D
Sbjct: 412 GSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVD 471

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           E + LF+ + ++  +K     +  L+  + + G+   A    + ++     P+     ++
Sbjct: 472 EGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVK---PSASVWAAL 528

Query: 507 LPAC 510
           L  C
Sbjct: 529 LAGC 532



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 192/430 (44%), Gaps = 50/430 (11%)

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
           +T+  L  F   +F+    +   ++S  S C  +       +I S         +V   N
Sbjct: 17  KTTTLLSSFGRYAFLLCNLHNSILSSQFSTCQVVP------KISSPVRDFSANSNVARSN 70

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
            LI    K  ++  A +VF+ + D+DV SW ++I GY + G   +A  LF     +D   
Sbjct: 71  WLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLF---DRNDAIK 127

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           NV+TW  L+SGY++    +EA  LF  M       +N  SWN++I GY + G  + AL +
Sbjct: 128 NVVTWTALVSGYVRWNRIEEARRLFDAMP-----VKNVISWNTMIEGYARKGWIDQALDL 182

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           F KM       N V+  +V+ A       ++ +E+      R  E  +    +++   +K
Sbjct: 183 FEKMPER----NVVSWNTVITAFMQRRRVDEAQEL----FNRMPERDVISWTTMVAGLSK 234

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
           +G I  +R +FD M  +++++WN++I GY  +     A  LF+QM    L          
Sbjct: 235 NGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGF 294

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP--- 664
           I    L   VD     F  ++    +      ++A+I  + + G+ EEA++   +M    
Sbjct: 295 IQNGKLERAVDF----FYKMSNKNVVT-----WTAVISGHVQDGRSEEALKIFSEMQAAN 345

Query: 665 -IEPDSSIWEALLTACRIHGNIDLAVLA--------IERLFDLEPGDVLIQRLILQIYAI 715
            ++P+   + ++L AC       LA L         I +    E  DV+    ++ +Y+ 
Sbjct: 346 NVKPNEGTFVSVLGACS-----KLAALCEGQQIHQIISKTVYQEVADVV--SALINMYSK 398

Query: 716 CGKPEDALKV 725
           CG+ E A K+
Sbjct: 399 CGELELARKI 408



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 103/437 (23%), Positives = 182/437 (41%), Gaps = 85/437 (19%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T ++     G +++A+ + + +  +   V  NT I    A +    +  A++L    N 
Sbjct: 164 NTMIEGYARKGWIDQALDLFEKMPERNV-VSWNTVIT---AFMQRRRVDEAQEL---FNR 216

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           + E DV   T +++  +K G +DDAR +F+ M  RN+ +W+ MI  Y+++ R  E  +LF
Sbjct: 217 MPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLF 276

Query: 146 FLM----------------------------------------------VQDGLFPDDFL 159
             M                                              VQDG   +   
Sbjct: 277 EQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALK 336

Query: 160 FPKILQACGN--------------CGDFEA---GKLMHSLVIKLGMSCVRRVRNSVLAVY 202
               +QA  N              C    A   G+ +H ++ K     V  V ++++ +Y
Sbjct: 337 IFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMY 396

Query: 203 VKCGKLIWARRFFE--SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
            KCG+L  AR+ F+  S+  +D V+WN MI+ Y   G   +A  LFD+M     +   VT
Sbjct: 397 SKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVT 456

Query: 261 FNILIRSYNQLGQCDVAMEMVK---RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           +  L+ + +  G  D  +++ +   R  S+ +  D F  TC++  F + GR  +A D  K
Sbjct: 457 YIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHF--TCLVDLFGRAGRLQEAFDFIK 514

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSK 375
            +    V P+     + ++ C     + +G      A K+  T+    G  L+  N+Y+ 
Sbjct: 515 GLE---VKPSASVWAALLAGCNVHGHIDLG---KLTAEKLLETEPENAGTYLVLSNIYAS 568

Query: 376 CEELEAAERVFDMIKDK 392
             +   A  V   +KDK
Sbjct: 569 TGKWREAAGVRMKMKDK 585


>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  332 bits (850), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 198/587 (33%), Positives = 309/587 (52%), Gaps = 50/587 (8%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P+ F WT MI G+A  G  S++ + +  M   GV P   T ++   AC     + +G ++
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164

Query: 351 HSLAVKMG-FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           H+  + +G F  D+ VGNS                               MI  Y + G+
Sbjct: 165 HAQTILIGGFASDLYVGNS-------------------------------MIDLYVKCGF 193

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
            G A ++F +M E DV    ++W  LI  Y + G+ + A  LF  +   D V     +W 
Sbjct: 194 LGCARKVFDEMSERDV----VSWTELIVAYAKYGDMESASGLFDDLPLKDMV-----AWT 244

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           +++ GY Q G+   AL  F+KMQ      + VT+  V+ ACA L A      I     R 
Sbjct: 245 AMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERS 304

Query: 530 SLESS--LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
               S  + V ++LID Y+K G+   +  +F+ M  +++ +++S+I GY +HG  H+AL 
Sbjct: 305 GFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQ 364

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           LF  M    ++PN+ TF+ I+ A S AG+V+ G+++F  + + + + P  +HY+ M+DL 
Sbjct: 365 LFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLL 424

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
           GR+G LEEA++ ++ MP+EP+  +W ALL ACRIHGN D+A +A   LF LEP  +    
Sbjct: 425 GRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPNGIGNYI 484

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN-LVYTFVTGGWSESYSDLLY 766
           L+  IYA  G+ E+  K+RK+ RE   + + G  W E KN  ++ F  G  +   S  + 
Sbjct: 485 LLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKNGEIHDFFAGDTTHPRSSEIR 544

Query: 767 SWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRI 821
             L+ + E + +      L      + ++EKE I   HSEKLALA+ L+  ++A  TI+I
Sbjct: 545 QALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMSHSEKLALAYGLL-CTEAGDTIKI 603

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +KNIR+C  CH      S +   EI + D+   HHF NG CSCG++W
Sbjct: 604 MKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHNGTCSCGNFW 650



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 206/424 (48%), Gaps = 47/424 (11%)

Query: 92  FVKTKLLSVYAKCGCLDDARE--VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           +V TKL+ +  K      +    VF  +   N + W+AMI  Y+      E    +  M 
Sbjct: 75  YVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGYALQGLLSESTNFYTRMR 134

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKL 208
           +DG+ P  F F  + +ACG   + + GK +H+  I +G  +    V NS++ +YVKCG L
Sbjct: 135 RDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFL 194

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             AR+ F+ M E+D V+W  +I  Y + G+ + A  LFD +  +++    V +  ++  Y
Sbjct: 195 GCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDM----VAWTAMVTGY 250

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
            Q G+   A+E  ++M+ +G+  D                         E++  GV    
Sbjct: 251 AQNGRPKEALEYFQKMQDVGMETD-------------------------EVTLAGV---- 281

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGF--TDDVLVGNSLINMYSKCEELEAAERVF 386
                 ISAC  L A+     I  +A + GF  + +V+VG++LI+MYSKC   + A +VF
Sbjct: 282 ------ISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVF 335

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
           +++K+++V+S++SMI GY   G    A +LF  M ++++ PN +T+  ++S     G  +
Sbjct: 336 EVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVE 395

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           +   LF +M K   V  +   +  ++    + G    AL + + M      PN     ++
Sbjct: 396 QGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPME---PNGGVWGAL 452

Query: 507 LPAC 510
           L AC
Sbjct: 453 LGAC 456



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 178/397 (44%), Gaps = 46/397 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVF 92
            G L+E+      +   G      T+  L +AC  + ++ L +++HA   L+     D++
Sbjct: 120 QGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLY 179

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWS-------------------------- 126
           V   ++ +Y KCG L  AR+VF++M ER++ +W+                          
Sbjct: 180 VGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKD 239

Query: 127 -----AMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
                AM+  Y+++ R +E +E F  M   G+  D+     ++ AC   G  +    +  
Sbjct: 240 MVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRD 299

Query: 182 LVIK--LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           +  +   G S    V ++++ +Y KCG    A + FE M E++  +++SMI GY   G  
Sbjct: 300 IAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRA 359

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTC 298
             A +LF  M + EI+   VTF  ++ + +  G  +   ++  +ME   G+ P    + C
Sbjct: 360 HSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYAC 419

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           M+    + G   +ALDL K M    + PNG    + + AC     +    +I  +A    
Sbjct: 420 MVDLLGRAGCLEEALDLVKTMP---MEPNGGVWGALLGACR----IHGNPDIAQIAANEL 472

Query: 359 FT-DDVLVGNSLI--NMYSKCEELEAAERVFDMIKDK 392
           F  +   +GN ++  N+Y+     E   ++  +I++K
Sbjct: 473 FKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREK 509



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 120/259 (46%), Gaps = 6/259 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA---RKLHAFLNLVTEIDV 91
           NGR  EA+     +   G +    T   ++ AC    ++  A   R +          +V
Sbjct: 253 NGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNV 312

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            V + L+ +Y+KCG  D+A +VFE M+ERN++++S+MI  Y+   R    ++LF  M++ 
Sbjct: 313 VVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKT 372

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK-LGMSCVRRVRNSVLAVYVKCGKLIW 210
            + P+   F  IL AC + G  E G+ + + + K  G++        ++ +  + G L  
Sbjct: 373 EIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEE 432

Query: 211 ARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
           A    ++M  E +G  W +++      G  D A    +++ + E   G+  + +L   Y 
Sbjct: 433 ALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEPN-GIGNYILLSNIYA 491

Query: 270 QLGQCDVAMEMVKRMESLG 288
             G+ +   ++ K +   G
Sbjct: 492 SAGRWEEVSKLRKVIREKG 510



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 11/225 (4%)

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV--YSRTIFDG 560
           ++S+L  C      +++K++H  ++R  L     V+  LI    K    +  Y   +F  
Sbjct: 45  LMSILHDCTLF---SQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQ 101

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           ++  +   W ++I GY L G    + + + +M+  G+ P   TF ++  A   A  +DLG
Sbjct: 102 VNYPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 161

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
           K+V             +   ++MIDLY + G L  A +  ++M  E D   W  L+ A  
Sbjct: 162 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMS-ERDVVSWTELIVAYA 220

Query: 681 IHGNIDLAVLAIERLFDLEP-GDVLIQRLILQIYAICGKPEDALK 724
            +G+++ A      LFD  P  D++    ++  YA  G+P++AL+
Sbjct: 221 KYGDMESA----SGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALE 261


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  331 bits (849), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 216/764 (28%), Positives = 361/764 (47%), Gaps = 117/764 (15%)

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           K +H  +I+   +    + N+++  Y K G L  AR  F+ + + +  +WN+++S Y ++
Sbjct: 25  KKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNLFSWNTLLSAYSKL 84

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
           G   +  R+FD M                                          DV +W
Sbjct: 85  GYLQDMQRVFDSMPNH---------------------------------------DVVSW 105

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
             ++SG+A NG  S+++ ++  M   G V  N +T ++ +   ++   + +G +IH    
Sbjct: 106 NSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIF 165

Query: 356 KMGFTDDVLVGNSLINMYSK-------------------------------CEELEAAER 384
           K G+   + VG+ L++MY+K                               C  +  AE+
Sbjct: 166 KFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQ 225

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ----------------------- 421
           +FD + +KD  SW ++I G  Q G   +A + F +M                        
Sbjct: 226 LFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLA 285

Query: 422 ------------ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
                        +D   N+   + L+  Y +  N   A  +F++M       +N  SW 
Sbjct: 286 LDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRH-----KNVISWT 340

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           +++ GY Q G    A+ +F  MQ +  +P+  T+ SV+ +CA L +  +  + HG  L  
Sbjct: 341 AMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALAS 400

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            L   + V N+LI  Y K G++ ++  +F  M  +D ++W +L+ GY   G  +  + LF
Sbjct: 401 GLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLF 460

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
           + M + G+ P+  TF+ ++ A S AG+V+ G   F  + + ++I P+ +HY+ MIDL  R
Sbjct: 461 ETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSR 520

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +G+LEEA  FI  MP  PD+  W  LL++CR++GN+++   A E L  LEP +     L+
Sbjct: 521 AGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILL 580

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS-- 767
             IYA  GK +D  K+RK  RE   +   G  WI+ KN V+ F     S  +SD +Y+  
Sbjct: 581 SSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKL 640

Query: 768 ---WLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
              +L+ + E      S     +E+ EK ++   HSEKLA+AF L+        IR+VKN
Sbjct: 641 ESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIAFGLLFIPDGLQ-IRVVKN 699

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +R+C  CH   KY+S +   EI + D+   H FK+G CSCGD+W
Sbjct: 700 LRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGVCSCGDFW 743



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 155/593 (26%), Positives = 265/593 (44%), Gaps = 114/593 (19%)

Query: 58  NTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           N Y   L+ C ++ +    +KLH   +  +T  + F+   L++ Y K G L +AR VF+ 
Sbjct: 6   NYYTAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDH 65

Query: 117 MRERNLYTWSAMIGAYSR------DQR------------WR-------------EVVELF 145
           + + NL++W+ ++ AYS+       QR            W              E V ++
Sbjct: 66  IPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVY 125

Query: 146 FLMVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
            +M++DG +  +   F  +L    N G  + G+ +H  + K G      V + ++ +Y K
Sbjct: 126 NMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAK 185

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
            G +  A R FE + EK+ V +N+MI+G  +     EA +LFD M  +            
Sbjct: 186 TGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEK------------ 233

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
                                      D  +WT +I+G  QNG   +A+D FKEM   G 
Sbjct: 234 ---------------------------DSISWTTIITGLTQNGLFKEAVDKFKEMGIEGF 266

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
             +  T  S ++AC    AL  G +IH+  ++  + D++ VG++L++MY KC  ++ AE 
Sbjct: 267 CMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEA 326

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN---------------- 428
           VF  ++ K+V SW +M+ GY Q GY  +A  +F  MQ +++ P+                
Sbjct: 327 VFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLAS 386

Query: 429 -------------------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
                              V   N LI+ Y + G+ + A  LF  M   D+V     SW 
Sbjct: 387 LEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEV-----SWT 441

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           +L++GY Q G+ N  + +F  M +    P+ VT + VL AC+      K      C+++ 
Sbjct: 442 ALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKE 501

Query: 530 SLESSLPVMNS-LIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
              + +P   + +ID  +++G +  ++   + M  S D I W +L+    L+G
Sbjct: 502 HRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNG 554



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 155/309 (50%), Gaps = 5/309 (1%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID- 90
           L  NG   EA+     +  +G  + + T+ ++L AC    ++   +++HA++      D 
Sbjct: 245 LTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDN 304

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +FV + LL +Y KC  +  A  VF  MR +N+ +W+AM+  Y ++    E V +F  M +
Sbjct: 305 IFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQR 364

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + + PDDF    ++ +C N    E G   H   +  G+ C   V N+++ +Y KCG L  
Sbjct: 365 NEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEH 424

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A + F  M  +D V+W +++SGY Q G+ +E   LF+ M    I    VTF  ++ + ++
Sbjct: 425 AHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSR 484

Query: 271 LGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G  +      + M +   ITP    +TCMI   ++ GR  +A +   +M F    P+ +
Sbjct: 485 AGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFS---PDAI 541

Query: 330 TITSAISAC 338
              + +S+C
Sbjct: 542 GWATLLSSC 550



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 122/508 (24%), Positives = 221/508 (43%), Gaps = 81/508 (15%)

Query: 34  GNGRLNEAITVLDSIATQGA-KVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDV 91
           GNG ++E++ V + +   G+  + R T+  +L    +   + L R++H        +  +
Sbjct: 114 GNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYL 173

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLY---------------------------- 123
           FV + L+ +YAK G ++DA  +FE++ E+N+                             
Sbjct: 174 FVGSPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEK 233

Query: 124 ---TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
              +W+ +I   +++  ++E V+ F  M  +G   D F F  +L ACG     + GK +H
Sbjct: 234 DSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIH 293

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
           + +I+        V +++L +Y KC  + +A   F  M  K+ ++W +M+ GY Q G ++
Sbjct: 294 AYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSE 353

Query: 241 EAHRLFDKMCREEIKL-------------------------------GVVTF----NILI 265
           EA R+F  M R EI                                 G++ F    N LI
Sbjct: 354 EAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALI 413

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             Y + G  + A ++   M+      D  +WT ++SG+AQ G+ ++ + LF+ M   G++
Sbjct: 414 TLYGKCGSLEHAHQLFHEMK----IRDEVSWTALVSGYAQFGKANETISLFETMLAHGIV 469

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS-LINMYSKCEELEAAER 384
           P+GVT    +SAC+    +  G       VK      +    + +I++ S+   LE A+ 
Sbjct: 470 PDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKN 529

Query: 385 VFDMIK-DKDVYSWNSMIAGYCQAG--YCGK-AYELFIKMQESDVPPNVITWNVLISGYI 440
             + +    D   W ++++     G    GK A E   K++    P N  ++ +L S Y 
Sbjct: 530 FINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLE----PQNPASYILLSSIYA 585

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASW 468
             G  D+   L + M +    K    SW
Sbjct: 586 AKGKWDDVAKLRKGMREMGVKKEPGHSW 613



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 194/435 (44%), Gaps = 62/435 (14%)

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           T+A+  C + +  A   ++H   ++     +  + N+LIN Y K  +L+ A  VFD I  
Sbjct: 9   TAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQ 68

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
            +++SWN++++ Y + GY      +F  M   D    V++WN L+SGY  NG   E+V +
Sbjct: 69  PNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHD----VVSWNSLLSGYAGNGLISESVRV 124

Query: 452 FQRMGKNDKVKRNTASWNSLI-----AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           +  M K+  V  N  ++++++      G+  LG++ +        QS  F  +   ++ +
Sbjct: 125 YNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGS--PLVDM 182

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
                ++  +N++ E          E ++ V N++I    +   IV +  +FD M  KD 
Sbjct: 183 YAKTGFINDANRIFE-------EIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDS 235

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
           I+W ++I G   +G +  A+D F +M   G   ++ TF S++ A      +D GK++   
Sbjct: 236 ISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAY 295

Query: 627 ITEC-YQ------------------------IIPMIEH-----YSAMIDLYGRSGKLEEA 656
           I    YQ                        +   + H     ++AM+  YG++G  EEA
Sbjct: 296 IIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEA 355

Query: 657 MEFIEDM---PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD---LEPG---DVLIQR 707
           +    DM    I PD     +++++C      +LA L     F    L  G    V +  
Sbjct: 356 VRIFCDMQRNEIHPDDFTLGSVISSC-----ANLASLEEGAQFHGQALASGLICFVTVSN 410

Query: 708 LILQIYAICGKPEDA 722
            ++ +Y  CG  E A
Sbjct: 411 ALITLYGKCGSLEHA 425


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 206/690 (29%), Positives = 354/690 (51%), Gaps = 54/690 (7%)

Query: 224 VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKR 283
           V+ N   S  +Q    DE  +L  ++   ++       N+L+ +Y++ G    A     R
Sbjct: 33  VSINDYASLLWQCRGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGR 92

Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
           +       +  +W  +++ +AQNG    A  LF  M   GV PN VT+++A+ ACT  + 
Sbjct: 93  I----TLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARN 148

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           LA+G +++ L        D  V +SLI MY +C E+E AER FD   +KDV  W +MI+ 
Sbjct: 149 LALGRKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISA 208

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY-----IQNG---NEDEA------- 448
           Y       +A EL  +M    +   + T+  L+        ++NG   ++  A       
Sbjct: 209 YAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRS 268

Query: 449 --------VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
                   V+L+ + G+ D  +        R + SW ++IA Y Q G    A+ +F+ M 
Sbjct: 269 STVVAGTLVNLYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMD 328

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNI 551
                P+ +T++SV+ +CA L   +  K IH  +    S   SL ++N++I  Y K GN+
Sbjct: 329 LEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNL 388

Query: 552 VYSRTIFD--GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK-SFGLKPNRGTFLSII 608
             +R +F+   + ++ ++TW ++I  Y  +G    A++LF +M    G +PNR TFLS++
Sbjct: 389 ELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVL 448

Query: 609 LAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME-FIEDMPIEP 667
            A S  G ++   + FCS+   + + P  +HY  ++DL GR+G+L EA +  +     E 
Sbjct: 449 CACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEA 508

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           D   W A L+AC+++G+++ +  A +R+ +LEP +V  + L+  +YA  G+  D  ++R 
Sbjct: 509 DVVCWIAFLSACQMNGDLERSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRN 568

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC- 786
             + +  +   G+ WIE+ N V+ F+    S      +YS L+ +   +      +G   
Sbjct: 569 EMKSSGVKKFAGRSWIEINNRVHEFMVSDVSHPRKLEIYSELERLHREI----KEAGYVP 624

Query: 787 --------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
                   ++EE+K ++ G HSE+LA+A  +I S+    T+R+VKN+R+C  CH   K++
Sbjct: 625 DTKMVLRDVDEEKKVQLLGYHSERLAMALGII-STPPGTTLRVVKNLRVCSDCHAATKFI 683

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S +   +I + D+   HHFK+G CSCGDYW
Sbjct: 684 SQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 225/491 (45%), Gaps = 44/491 (8%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           N Y +LL  C   + +   RKLHA +     + + F+   L+  Y+K G L  A+  F  
Sbjct: 36  NDYASLLWQCRGLDEV---RKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGR 92

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           +   N ++W+ ++ AY+++   R    LF  M   G+ P+       L AC    +   G
Sbjct: 93  ITLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALG 152

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           + ++ L+    +     V +S++ +Y +C ++  A R F+   EKD V W +MIS Y   
Sbjct: 153 RKLNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHN 212

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRS----------------------------- 267
                A  L  +M  E IKLG+ T+  L+ +                             
Sbjct: 213 WRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVV 272

Query: 268 ----YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
                N  G+C    +  + ++++ +   V +WT MI+ +AQNG  ++A++LF+ M   G
Sbjct: 273 AGTLVNLYGKCGRVDDARRVLDAMPVRTSV-SWTAMIAAYAQNGNAAEAINLFQCMDLEG 331

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHS-LAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
             P+ +T+ S + +C  L  L++G  IH+ +     F+  +++ N++I MY KC  LE A
Sbjct: 332 AEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELA 391

Query: 383 ERVFDMI--KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ-ESDVPPNVITWNVLISGY 439
             VF+ +  + + V +W +MI  Y Q G   +A ELF +M  +    PN +T+  ++   
Sbjct: 392 REVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCAC 451

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
              G  ++A + F  MG +  V      +  L+    + G+   A  +  + +   F  +
Sbjct: 452 SHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKD--FEAD 509

Query: 500 CVTILSVLPAC 510
            V  ++ L AC
Sbjct: 510 VVCWIAFLSAC 520



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 208/479 (43%), Gaps = 51/479 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NG    A T+   + +QG +    T    L AC  + ++ L RKL+  + +   EID  V
Sbjct: 111 NGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHV 170

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           ++ L+++Y +C  +++A   F+   E+++  W+AMI AY+ + R    +EL   M  +G+
Sbjct: 171 ESSLITMYGRCREIEEAERAFDRSPEKDVVCWTAMISAYAHNWRTSRALELVRRMDLEGI 230

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM---SCVRRVRNSVLAVYVKCGKLIW 210
                 +  +L AC +  D   G   H     +G+   S V  V  +++ +Y KCG++  
Sbjct: 231 KLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTV--VAGTLVNLYGKCGRVDD 288

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE------------------ 252
           ARR  ++M  +  V+W +MI+ Y Q G   EA  LF  M  E                  
Sbjct: 289 ARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAV 348

Query: 253 --EIKLG----------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGI-TPDV 293
              + LG                ++  N +I  Y + G  ++A E+    E + + T  V
Sbjct: 349 LGTLSLGKRIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREV---FECVPLRTRSV 405

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSF-VGVMPNGVTITSAISACTDLKALAMGME-IH 351
            TWT MI  +AQNG   +A++LF+EM    G  PN VT  S + AC+ L  L    E   
Sbjct: 406 VTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFC 465

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD--KDVYSWNSMIAGYCQAGY 409
           S+    G          L+++  +   L  AE++    KD   DV  W + ++     G 
Sbjct: 466 SMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGD 525

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
             ++     ++ E + P NV    +L + Y   G   +   +   M  +   K    SW
Sbjct: 526 LERSQRAAKRVSELE-PENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSW 583


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 253/927 (27%), Positives = 434/927 (46%), Gaps = 105/927 (11%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDS--NSIHLARKLHAFLNLVT-EIDV 91
            NG+ +EA      +   G       + + L+AC +S  +   L  ++H  ++      DV
Sbjct: 150  NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 209

Query: 92   FVKTKLLSVYAKC-GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
             V   L+S+Y  C    +DAR VF+ +  RN  +W+++I  YSR        +LF  M +
Sbjct: 210  VVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQK 269

Query: 151  DGLF----PDDFLFPKILQACGNCGDFEAGKL--MHSLVIKLGMSCVRRVRNSVLAVYVK 204
            +GL     P+++ F  ++    +  DF    L  M + V K G      V +++++ + +
Sbjct: 270  EGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFAR 329

Query: 205  CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
             G    A+  FE M  ++ V+ N ++ G  +  + + A ++F +M ++ + +   ++ +L
Sbjct: 330  FGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEM-KDLVGINSDSYVVL 388

Query: 265  IRSYNQLGQCDVAMEMVKRMES------------------------------------LG 288
            + ++++    +      + + +                                    L 
Sbjct: 389  LSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELM 448

Query: 289  ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
            +  D  +W  +ISG  QN  +  A + F  M   G MP+  T+ S +S+C  L  + +G 
Sbjct: 449  VEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGE 508

Query: 349  EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA- 407
            +IH   +K+G   DV V N+L+ +Y++        +VF ++ + D  SWNS+I     + 
Sbjct: 509  QIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSE 568

Query: 408  GYCGKAYELFIKMQESDVPPNVITW----------------------------------- 432
                +A + F++M       + +T+                                   
Sbjct: 569  ASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIG 628

Query: 433  NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
            N L+S Y + G  +E   +F RM +     R+  SWNS+I+GY      + A+ +   M 
Sbjct: 629  NALLSCYGKCGEMNECEKIFARMSET----RDEVSWNSMISGYIHNELLHKAMDLVWFMM 684

Query: 493  SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
                  +  T  ++L ACA +    +  E+H C +R  LES + V ++L+D Y+K G I 
Sbjct: 685  QKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRID 744

Query: 553  YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            Y+   F+ M  +++ +WNS+I GY  HG    AL LF +M   G  P+  TF+ ++ A S
Sbjct: 745  YASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACS 804

Query: 613  LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
              G V+ G + F S++E Y++ P +EH+S M+DL GR+GKL+E  +FI  MP++P+  IW
Sbjct: 805  HVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIW 864

Query: 673  EALLTA-CRIHG-NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLER 730
              +L A CR +G N +L   A E L +LEP + +   L+  +YA   K ED  K R   +
Sbjct: 865  RTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMK 924

Query: 731  ENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGL 785
            E   +   G  W+ +K+ V+ FV G       DL+Y  L+ +   +       ++ ++  
Sbjct: 925  EAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALF 984

Query: 786  CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCE 845
             +E E KEE+   HSEK+A+AF L   S  P  IRI+KN+R+C  CH    Y+S +    
Sbjct: 985  DLELENKEELLSYHSEKIAVAFVLTRQSALP--IRIMKNLRVCGDCHSAFGYISKI---- 1038

Query: 846  IFLADSKCLHHFKN-----GQCSCGDY 867
            IF      +    N      QC CGD+
Sbjct: 1039 IFFFLKMAMKPSNNIWIRRQQCPCGDW 1065



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 209/792 (26%), Positives = 357/792 (45%), Gaps = 110/792 (13%)

Query: 1   FFIWILTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEA---ITVLDSIATQGAKVRR 57
           F  +  + F  L SLL K  NP      L  L  + + + +    T+  S  T       
Sbjct: 21  FTTFTASPFPPLKSLLFKPLNPNQCTKSLQDLVDHYKTSTSHCNTTLFSSSET------F 74

Query: 58  NTYINLLQACI---DSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVF 114
            + IN  Q      ++  +HL    + F+      ++F+   L+++Y + G L  A+++F
Sbjct: 75  ESLINRYQGSCCSEEARELHLQSIKYGFVG-----NLFLSNTLINIYVRIGDLGSAQKLF 129

Query: 115 EDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF- 173
           ++M  RNL TW+ +I  Y+++ +  E    F  MV+ G  P+ + F   L+AC   G   
Sbjct: 130 DEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSG 189

Query: 174 -EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC-GKLIWARRFFESMDEKDGVAWNSMIS 231
            + G  +H L+ K        V N ++++Y  C      AR  F+ +  ++ ++WNS+IS
Sbjct: 190 CKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIIS 249

Query: 232 GYFQIGENDEAHRLFDKMCRE----EIKLGVVTFNILIR---SYNQLGQCDVAMEMVKRM 284
            Y + G+   A+ LF  M +E      K    TF  LI    S    G C V  +M+ R+
Sbjct: 250 VYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLC-VLEQMLARV 308

Query: 285 ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP-NG--------------- 328
           E  G   D++  + ++SGFA+ G T  A ++F++M    V+  NG               
Sbjct: 309 EKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAA 368

Query: 329 -----------------VTITSAISACTDL-KALAMGMEIHSLAVKMGFTDD-VLVGNSL 369
                            V + SA S  + L +    G E+H+  ++ G  D+ V +GN L
Sbjct: 369 KVFHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGL 428

Query: 370 INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           +NMY+K   +  A  VF+++ +KD  SWNS+I+G  Q      A E F +M+ +   P+ 
Sbjct: 429 VNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSN 488

Query: 430 IT------------W-----------------------NVLISGYIQNGNEDEAVDLFQR 454
            T            W                       N L++ Y + G   E + +F  
Sbjct: 489 FTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSL 548

Query: 455 MGKNDKVKRNTASWNSLIAGYQQL-GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
           M + D+V     SWNS+I          + A+  F +M    +  + VT +++L A + L
Sbjct: 549 MPEYDQV-----SWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSL 603

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSL 572
                  +IH  VL+  L     + N+L+  Y K G +     IF  MS ++D ++WNS+
Sbjct: 604 SLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSM 663

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF-CSITECY 631
           I GY+ +   H A+DL   M   G + +  TF +I+ A +    ++ G +V  C I  C 
Sbjct: 664 ISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACL 723

Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
           +   ++   SA++D+Y + G+++ A  F E MP+    S W ++++    HG+ + A+  
Sbjct: 724 ESDVVVG--SALVDMYSKCGRIDYASRFFELMPLRNVYS-WNSMISGYARHGHGEKALKL 780

Query: 692 IER-LFDLEPGD 702
             R + D +P D
Sbjct: 781 FTRMMLDGQPPD 792


>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 650

 Score =  331 bits (849), Expect = 9e-88,   Method: Compositional matrix adjust.
 Identities = 201/593 (33%), Positives = 315/593 (53%), Gaps = 27/593 (4%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P +F W  MI G+++       + ++  M    + P+  T   ++   T   AL  G E+
Sbjct: 70  PSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKEL 129

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
            + AVK GF  ++ V  + I+M+S C  ++ A +VFDM    +V +WN M++GY +    
Sbjct: 130 LNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVKQF 189

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNG----------NEDEAVDLFQRMGKNDK 460
             +  L +    S +    + W   I  YI  G            DEA  +F  M     
Sbjct: 190 KISKMLLVLSACSKLKD--LEWGKHIFKYINGGIVEHMFAACGEMDEAQGVFDNMKT--- 244

Query: 461 VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
             R+  SW ++I GY ++     AL +FR+MQ S   P+  T++S+L ACA L A    +
Sbjct: 245 --RDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGE 302

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
            +  C+ + S ++   V N+L+D Y K GN+  ++ +F  M  KD  TW ++I G  ++G
Sbjct: 303 WVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAING 362

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
               AL +F  M    + P+  T++ ++ A     MVD GK  F ++T  + I P + HY
Sbjct: 363 HGEEALAMFSNMIEASVTPDEITYIGVLCA----CMVDKGKSFFTNMTMQHGIKPTVTHY 418

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
             M+DL G  G LEEA+E I +MP++P+S +W + L ACR+H N+ LA +A +++ +LEP
Sbjct: 419 GCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMAAKQILELEP 478

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
            +  +  L+  IYA   K E+  +VRKL  E   + + G   +E+   VY FV G  S  
Sbjct: 479 ENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHP 538

Query: 761 YSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQA 815
            S  +Y+ L+N+ + +     +  +S   L + EE+KE     HSEKLA+A+ALI S   
Sbjct: 539 QSKEIYAKLENMMQGLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIAYALISSGPG 598

Query: 816 PHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             TIRIVKN+RMCV CH  AK VS  ++ E+ + D    HHF++G CSC ++W
Sbjct: 599 V-TIRIVKNLRMCVDCHHMAKLVSQAYNRELIVKDKTRFHHFRHGSCSCNNFW 650



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 211/462 (45%), Gaps = 27/462 (5%)

Query: 61  INLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSV--YAKCGCLDDAREVFEDM 117
           I+LL+ C    S++  +++H+  + +    D   + ++++     + G ++ A +VF+ +
Sbjct: 11  ISLLEKC---KSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTI 67

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
              +++ W+ MI  YS+       V ++ LM+   + PD F FP  L+        + GK
Sbjct: 68  PHPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGK 127

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            + +  +K G      V+ + + ++  CG +  A + F+  D  + V WN M+SGY ++ 
Sbjct: 128 ELLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVK 187

Query: 238 ENDEAHRLFDKMCREEIK--------LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           +   +  L       ++K           +   I+   +   G+ D A  +   M+    
Sbjct: 188 QFKISKMLLVLSACSKLKDLEWGKHIFKYINGGIVEHMFAACGEMDEAQGVFDNMK---- 243

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
           T DV +WT MI G+ +      AL LF+EM    V P+  T+ S + AC  L AL +G  
Sbjct: 244 TRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACALLGALELGEW 303

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           + +   K    +D  VGN+L++MY KC  +  A++VF  +  KD ++W +MI G    G+
Sbjct: 304 VKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTTMIVGLAINGH 363

Query: 410 CGKAYELFIKMQESDVPPNVITW-NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
             +A  +F  M E+ V P+ IT+  VL +  +     D+    F  M     +K     +
Sbjct: 364 GEEALAMFSNMIEASVTPDEITYIGVLCACMV-----DKGKSFFTNMTMQHGIKPTVTHY 418

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             ++     +G    AL V   M      PN +   S L AC
Sbjct: 419 GCMVDLLGCVGCLEEALEVIVNMPVK---PNSIVWGSPLGAC 457



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 178/401 (44%), Gaps = 69/401 (17%)

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE--LEAAERVFDMIK 390
           S IS     K++    +IHS  +KMG + D L  N +I      E   +  A +VFD I 
Sbjct: 9   SPISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIP 68

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY-----IQNGNE 445
              ++ WN+MI GY +  +      +++ M  S++ P+  T+   + G+     +Q+G E
Sbjct: 69  HPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKE 128

Query: 446 --DEAVD---------------LFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQ 480
             + AV                +F   G  D   +           +WN +++GY ++ Q
Sbjct: 129 LLNHAVKHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVKQ 188

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV----ASNKVKEIHGCVLRRSLESSLP 536
                  F+  +          +L VL AC+ L       +  K I+G ++         
Sbjct: 189 -------FKISK----------MLLVLSACSKLKDLEWGKHIFKYINGGIVEH------- 224

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
                   +A  G +  ++ +FD M ++D+++W ++I GY+    +  AL LF +M+   
Sbjct: 225 -------MFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSN 277

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           +KP+  T +SI++A +L G ++LG+ V   I +           +A++D+Y + G + +A
Sbjct: 278 VKPDEFTMVSILIACALLGALELGEWVKTCIDKNSNKNDSFVG-NALVDMYFKCGNVRKA 336

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
            +  ++M  + D   W  ++    I+G+ + A+     + +
Sbjct: 337 KKVFKEM-YQKDKFTWTTMIVGLAINGHGEEALAMFSNMIE 376



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 10/117 (8%)

Query: 491 MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA---K 547
           M S CF     + +S+L  C  +    ++K+IH   ++  L SS P+  + +  +    +
Sbjct: 1   MISHCFGE---SPISLLEKCKSMY---QLKQIHSHTIKMGL-SSDPLFRNRVIAFCCAHE 53

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           SGN+ Y+  +FD +    +  WN++I GY         + ++  M +  +KP+R TF
Sbjct: 54  SGNMNYAHQVFDTIPHPSMFIWNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTF 110


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 210/673 (31%), Positives = 333/673 (49%), Gaps = 81/673 (12%)

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
           L V+TF  L+  Y++ G  + A ++   +       +V  WT +++G+ QN     AL L
Sbjct: 99  LFVMTF--LVNVYSKCGVMESAHKVFDNLPR----RNVNAWTTLLTGYVQNSHPLLALQL 152

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           F +M   G  P+  T+   ++AC+ L+++  G ++H+  +K     D  +GNSL + YSK
Sbjct: 153 FIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSK 212

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
              LE A + F +IK+KDV SW S+I+  C  G   ++   F+ M    + PN  T   +
Sbjct: 213 FRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSV 272

Query: 436 ISG-----------------------------------YIQNGNEDEAVDLFQRMGKNDK 460
           +S                                    Y++ G   EA  LF+ M     
Sbjct: 273 LSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMET--- 329

Query: 461 VKRNTASWNSLIAGYQQL-----------GQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
              N  +WN++IAG+ ++              + AL +F+K+  S   P+  T  SVL  
Sbjct: 330 --LNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSV 387

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           C+ LVA  + ++IHG +++  + + + V  +L+  Y K G+I  +   F  M S+ +I+W
Sbjct: 388 CSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISW 447

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
            S+I G+  HG    AL LF+ M+  G+KPN+ TF+ ++ A S AG+ D     F  + +
Sbjct: 448 TSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQK 507

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            Y I P+++H++ +ID+Y R G++EEA + +  M  EP+ +IW  L+  CR HG  DL  
Sbjct: 508 QYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGF 567

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLV 749
            A E+L  L+P DV     +L ++   G+ +D  KVRKL +E          WI +K  V
Sbjct: 568 YAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKV 627

Query: 750 YTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEI-------------- 795
           Y+F     S   S  +Y  L+ V   V A        +  E  E++              
Sbjct: 628 YSFKPNDKSHCQSLEMYKLLETVLNEVKA--------LGYEPIEDVEVIEKEENEERVLS 679

Query: 796 -SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCL 854
            + +HSEKLA+AF L+    A   IR+VK+I MC  CH   +++S++   EI + DSK L
Sbjct: 680 STVLHSEKLAIAFGLLNLPTAT-PIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQL 738

Query: 855 HHFKNGQCSCGDY 867
           H F NG CSCG Y
Sbjct: 739 HKFLNGYCSCGGY 751



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 268/555 (48%), Gaps = 65/555 (11%)

Query: 12  LHSLLTKKSNPRFRDTHLDFLCGNG------RLNEAITVLDSIATQ----GAKVRRNTYI 61
           L + L  +++PR R +   F   +       + N ++  L+ +  +    G ++  + Y 
Sbjct: 9   LTAALKLETHPRKRHSTASFPLNDKDKSVGFQKNHSLIQLNVVDAEEPKLGTRIESSYYF 68

Query: 62  NLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
            LLQ CID N    AR +H   +      D+FV T L++VY+KCG ++ A +VF+++  R
Sbjct: 69  PLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLPRR 128

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           N+  W+ ++  Y ++      ++LF  M++ G +P ++    +L AC +    E GK +H
Sbjct: 129 NVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVH 188

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
           + +IK  +     + NS+ + Y K  +L +A + F+ + EKD ++W S+IS     G+  
Sbjct: 189 AYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAA 248

Query: 241 EAHRLFDKMCRE-------------------------------EIKLG----VVTFNILI 265
            +   F  M  +                                IKLG    ++  N ++
Sbjct: 249 RSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIM 308

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ-----------NGRTSQALD 314
             Y + G    A ++ + ME+L    ++ TW  MI+G A+           +   S AL 
Sbjct: 309 YLYLKCGWLIEAQKLFEGMETL----NLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALA 364

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
           +F+++   G+ P+  T +S +S C++L AL  G +IH   +K G   DV+VG +L++MY+
Sbjct: 365 MFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYN 424

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           KC  ++ A + F  +  + + SW SMI G+ + G   +A +LF  M+   + PN +T+  
Sbjct: 425 KCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVG 484

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           ++S     G  DEA+  F+ M K   +K     +  LI  Y +LG+   A  V  KM   
Sbjct: 485 VLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMN-- 542

Query: 495 CFYPNCVTILSVLPA 509
            F PN  TI S+L A
Sbjct: 543 -FEPN-ETIWSMLIA 555



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 228/484 (47%), Gaps = 62/484 (12%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLS 99
           A+ +   +   GA     T   +L AC    SI   +++HA+L     + D  +   L S
Sbjct: 149 ALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSS 208

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
            Y+K   L+ A + F+ ++E+++ +W+++I +   + +    +  F  M+ DG+ P+++ 
Sbjct: 209 FYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYT 268

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
              +L AC      + G  +HSL IKLG      ++NS++ +Y+KCG LI A++ FE M+
Sbjct: 269 LTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGME 328

Query: 220 EKDGVAWNSMISGY---FQIGEND-EAHR-------LFDKMCREEIKLGVVTFN------ 262
             + V WN+MI+G+     + E+D  AH+       +F K+ R  +K  + TF+      
Sbjct: 329 TLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVC 388

Query: 263 -----------------------------ILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
                                         L+  YN+ G  D A +    M S      +
Sbjct: 389 SNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPS----RTM 444

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            +WT MI+GFA++G + QAL LF++M  VG+ PN VT    +SAC+        +    L
Sbjct: 445 ISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFEL 504

Query: 354 AVKMGFTDDVLVGNS-LINMYSKCEELEAA-ERVFDMIKDKDVYSWNSMIAG---YCQAG 408
             K      V+   + LI+MY +   +E A + V  M  + +   W+ +IAG   + ++ 
Sbjct: 505 MQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSD 564

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV-KRNTAS 467
               A E  +K++    P +V T+  L++ +I  G   + V   +++ K +KV K    S
Sbjct: 565 LGFYAAEQLLKLK----PKDVETYVSLLNMHISAGRWKD-VSKVRKLMKEEKVGKLKDWS 619

Query: 468 WNSL 471
           W S+
Sbjct: 620 WISI 623



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 191/404 (47%), Gaps = 34/404 (8%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDV 91
           C NG+   +++    + + G K    T  ++L AC    ++ L  ++H+  + L     +
Sbjct: 242 CDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSI 301

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWRE----------- 140
            +K  ++ +Y KCG L +A+++FE M   NL TW+AMI  +++     E           
Sbjct: 302 LIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGST 361

Query: 141 VVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
            + +F  + + G+ PD F F  +L  C N    E G+ +H  +IK G+     V  ++++
Sbjct: 362 ALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVS 421

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y KCG +  A + F  M  +  ++W SMI+G+ + G + +A +LF+ M    IK   VT
Sbjct: 422 MYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVT 481

Query: 261 FNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           F  ++ + +  G  D A+   + M+    I P +  + C+I  + + GR  +A D+  +M
Sbjct: 482 FVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKM 541

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY------ 373
           +F    PN    +  I+ C       +G       +K+    DV    SL+NM+      
Sbjct: 542 NF---EPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLK-PKDVETYVSLLNMHISAGRW 597

Query: 374 ---SKCEELEAAERVFDM-------IKDKDVYSWNSMIAGYCQA 407
              SK  +L   E+V  +       IK+K VYS+      +CQ+
Sbjct: 598 KDVSKVRKLMKEEKVGKLKDWSWISIKEK-VYSFKPNDKSHCQS 640



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 93/190 (48%), Gaps = 9/190 (4%)

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           +++SS ++P       +L  C     + + + IHG +++      L VM  L++ Y+K G
Sbjct: 61  RIESSYYFP-------LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCG 113

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
            +  +  +FD +  +++  W +L+ GYV +     AL LF +M   G  P+  T   ++ 
Sbjct: 114 VMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLN 173

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDS 669
           A S    ++ GK+V   + + Y I       +++   Y +  +LE A++  + +  E D 
Sbjct: 174 ACSSLQSIEFGKQVHAYLIK-YHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIK-EKDV 231

Query: 670 SIWEALLTAC 679
             W +++++C
Sbjct: 232 ISWTSVISSC 241


>gi|255559020|ref|XP_002520533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540375|gb|EEF41946.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 547

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 174/483 (36%), Positives = 278/483 (57%), Gaps = 7/483 (1%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           LI  Y +  Q  +  ++  R+      P+ +  T +I  ++++G     LD+F EM    
Sbjct: 70  LISFYTETRQLSIVRKLFDRIPK----PNFYQRTVLIGAYSRHGFYQDVLDVFSEMQNER 125

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           + PN   I S + AC  +  L  G  +HS+ ++  F  DV+V  +LI+MYS+C  +E A 
Sbjct: 126 LRPNKFVIPSVLRACGHVFDLQTGKILHSVILRHLFESDVVVNTALIDMYSRCRHVEKAR 185

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
           +VFD +++KD+ + N+M+ GY Q G+  + + L  +MQ  D+ PN++TWN LISG+ Q G
Sbjct: 186 KVFDGMQEKDLVALNAMVLGYAQNGFAKEGFLLVEQMQMLDIKPNLVTWNTLISGFAQAG 245

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           ++    +LF  M  +   + +  SW S+I+ + Q      A   F++M     YPN  TI
Sbjct: 246 DKVMVQELFGLMSMHG-FEPDVISWTSVISRFVQNSHNEAAFAAFKQMLQHGAYPNSATI 304

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
            S+LPACA L      +E+HG      +E  + V ++++D Y+K G I  +R +F  M  
Sbjct: 305 SSLLPACASLANVRHGRELHGYAFAIGVEEDIYVRSAIVDMYSKCGLISEARMLFSKMPE 364

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQM-KSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
           +  +TWNS+I GY  HG+   A++LF+QM K+   K +  +F +++ A S   +V+LG+ 
Sbjct: 365 RHTVTWNSMIFGYANHGYCDEAIELFNQMEKTEAKKIDHLSFTAVLTACSHGRLVELGQS 424

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
           +F  + E Y+I+P +EHY+ MIDL GR+GKL EA + I+ MP+EPD  +W ALL ACR H
Sbjct: 425 LFLLMHEKYKIVPRLEHYACMIDLLGRAGKLSEAYDMIKTMPVEPDLFVWGALLGACRQH 484

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
           G IDLA +A   L +LEP +     L+  +YA  G  E+  K++  +R+  R+ S    W
Sbjct: 485 GEIDLAEIAARHLAELEPRNAGNNMLLSNLYADAGSWENVAKLKMGKRKRLRKFS-AYSW 543

Query: 743 IEV 745
           I++
Sbjct: 544 IQL 546



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 209/369 (56%), Gaps = 3/369 (0%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNL--VTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           +T+  L++     ++++  + LHA L +  +   + F  +KL+S Y +   L   R++F+
Sbjct: 30  HTFDELIKTYTRDHALNQGKHLHARLIVSGLASSNNFA-SKLISFYTETRQLSIVRKLFD 88

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            + + N Y  + +IGAYSR   +++V+++F  M  + L P+ F+ P +L+ACG+  D + 
Sbjct: 89  RIPKPNFYQRTVLIGAYSRHGFYQDVLDVFSEMQNERLRPNKFVIPSVLRACGHVFDLQT 148

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           GK++HS++++        V  +++ +Y +C  +  AR+ F+ M EKD VA N+M+ GY Q
Sbjct: 149 GKILHSVILRHLFESDVVVNTALIDMYSRCRHVEKARKVFDGMQEKDLVALNAMVLGYAQ 208

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
            G   E   L ++M   +IK  +VT+N LI  + Q G   +  E+   M   G  PDV +
Sbjct: 209 NGFAKEGFLLVEQMQMLDIKPNLVTWNTLISGFAQAGDKVMVQELFGLMSMHGFEPDVIS 268

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           WT +IS F QN     A   FK+M   G  PN  TI+S + AC  L  +  G E+H  A 
Sbjct: 269 WTSVISRFVQNSHNEAAFAAFKQMLQHGAYPNSATISSLLPACASLANVRHGRELHGYAF 328

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
            +G  +D+ V +++++MYSKC  +  A  +F  + ++   +WNSMI GY   GYC +A E
Sbjct: 329 AIGVEEDIYVRSAIVDMYSKCGLISEARMLFSKMPERHTVTWNSMIFGYANHGYCDEAIE 388

Query: 416 LFIKMQESD 424
           LF +M++++
Sbjct: 389 LFNQMEKTE 397



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 120/248 (48%), Gaps = 9/248 (3%)

Query: 97  LLSVYAKCGCLDDAREVFEDMR----ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           L+S +A+ G     +E+F  M     E ++ +W+++I  + ++         F  M+Q G
Sbjct: 237 LISGFAQAGDKVMVQELFGLMSMHGFEPDVISWTSVISRFVQNSHNEAAFAAFKQMLQHG 296

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            +P+      +L AC +  +   G+ +H     +G+     VR++++ +Y KCG +  AR
Sbjct: 297 AYPNSATISSLLPACASLANVRHGRELHGYAFAIGVEEDIYVRSAIVDMYSKCGLISEAR 356

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI-KLGVVTFNILIRSYNQL 271
             F  M E+  V WNSMI GY   G  DEA  LF++M + E  K+  ++F  ++ + +  
Sbjct: 357 MLFSKMPERHTVTWNSMIFGYANHGYCDEAIELFNQMEKTEAKKIDHLSFTAVLTACSHG 416

Query: 272 GQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
              ++   +   M E   I P +  + CMI    + G+ S+A D+ K M    V P+   
Sbjct: 417 RLVELGQSLFLLMHEKYKIVPRLEHYACMIDLLGRAGKLSEAYDMIKTMP---VEPDLFV 473

Query: 331 ITSAISAC 338
             + + AC
Sbjct: 474 WGALLGAC 481



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 6/213 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N     A      +   GA     T  +LL AC    ++   R+LH +   +  E D++V
Sbjct: 279 NSHNEAAFAAFKQMLQHGAYPNSATISSLLPACASLANVRHGRELHGYAFAIGVEEDIYV 338

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           ++ ++ +Y+KCG + +AR +F  M ER+  TW++MI  Y+      E +ELF  M +   
Sbjct: 339 RSAIVDMYSKCGLISEARMLFSKMPERHTVTWNSMIFGYANHGYCDEAIELFNQMEKTEA 398

Query: 154 FPDDFL-FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS--VLAVYVKCGKLIW 210
              D L F  +L AC +    E G+ +  L++      V R+ +   ++ +  + GKL  
Sbjct: 399 KKIDHLSFTAVLTACSHGRLVELGQSLF-LLMHEKYKIVPRLEHYACMIDLLGRAGKLSE 457

Query: 211 ARRFFESMD-EKDGVAWNSMISGYFQIGENDEA 242
           A    ++M  E D   W +++    Q GE D A
Sbjct: 458 AYDMIKTMPVEPDLFVWGALLGACRQHGEIDLA 490



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 10/226 (4%)

Query: 487 VFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
           ++R  QSS  +    T   ++       A N+ K +H  ++   L SS    + LI  Y 
Sbjct: 20  IYRSFQSSSLH----TFDELIKTYTRDHALNQGKHLHARLIVSGLASSNNFASKLISFYT 75

Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
           ++  +   R +FD +   +      LI  Y  HGF+   LD+F +M++  L+PN+    S
Sbjct: 76  ETRQLSIVRKLFDRIPKPNFYQRTVLIGAYSRHGFYQDVLDVFSEMQNERLRPNKFVIPS 135

Query: 607 IILAHSLAGMVDLGK-KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
           ++ A     + DL   K+  S+   +     +   +A+ID+Y R   +E+A +  + M  
Sbjct: 136 VLRA--CGHVFDLQTGKILHSVILRHLFESDVVVNTALIDMYSRCRHVEKARKVFDGMQ- 192

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIE--RLFDLEPGDVLIQRLI 709
           E D     A++     +G      L +E  ++ D++P  V    LI
Sbjct: 193 EKDLVALNAMVLGYAQNGFAKEGFLLVEQMQMLDIKPNLVTWNTLI 238


>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 721

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 237/745 (31%), Positives = 365/745 (48%), Gaps = 94/745 (12%)

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
           D   GK +H+L +K  ++    + N  + +Y KCG L +AR  F+S +E +         
Sbjct: 23  DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPN--------- 73

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
                                     V ++N+++++Y +    D  + + +++      P
Sbjct: 74  --------------------------VFSYNVIVKAYAK----DSKIHIARQLFDENPQP 103

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           D  ++  +ISG+A    T  A+ LFK M  +G   +G T++  I+AC D   L    ++H
Sbjct: 104 DTVSYNTLISGYADARETVAAMVLFKRMRELGFEVDGFTLSGLIAACCDRVDLIK--QLH 161

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWNSMIAGYCQAGYC 410
             AV  GF     V N+ +  YSK   L  A  VF  M   +D  SWNSMI  Y Q    
Sbjct: 162 CFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEG 221

Query: 411 GKAYELFIKMQESDVPPNVITW----NVLIS-----------------GYIQNGNEDEA- 448
            KA  L+ +M       ++ T     N L S                 G+ QN +     
Sbjct: 222 AKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGL 281

Query: 449 VDLFQRMGKND------KVKRNTAS-----WNSLIAGYQQLGQKNN-ALGVFRKMQSSCF 496
           +D + + G  D      KV +   S     WN++I+GY    + +  A+  FR+MQ    
Sbjct: 282 IDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGH 341

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS-LPVMNSLIDTYAKSGNIVYSR 555
            P+  + + V  AC+ L + ++ K+IHG  ++ ++ S+ + V N+LI  Y KSGN++ +R
Sbjct: 342 RPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDAR 401

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            +FD M   + +++N +I GY  HG    AL L+ +M   G+ PN  TF++I+ A +  G
Sbjct: 402 RVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCG 461

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
            VD G+K F ++ E ++I P  EHYS MIDL GR+GKLEEA  FI+ MP +P S  W AL
Sbjct: 462 KVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAAL 521

Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
           L ACR H N+ LA  A + L  ++P       ++  +YA  GK E+   VRK  R    R
Sbjct: 522 LGACRKHKNMALAERAAKELMVMQPLAATPYVMLANMYADAGKWEEMASVRKSMRGKRIR 581

Query: 736 NSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEE----- 790
              G  WIEVK   + FV   WS      +  +L    E +  +    G  ++++     
Sbjct: 582 KKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYL----EEMMKKMKKVGYVMDKKWAMVK 637

Query: 791 -------EKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHH 843
                  E+E   G HSEKLA+AF L+ S++    I +VKN+R+C  CH   K++S +  
Sbjct: 638 EDEAGEGEEEMRLGHHSEKLAVAFGLM-STRDGEEIVVVKNLRICGDCHNAIKFMSAVAG 696

Query: 844 CEIFLADSKCLHHFKNGQCSCGDYW 868
            EI + D+   H FK+G+CSCGDYW
Sbjct: 697 REIIVRDNLRFHCFKDGKCSCGDYW 721



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 146/582 (25%), Positives = 254/582 (43%), Gaps = 85/582 (14%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           ++ +LL   +    +   + LHA ++  +     ++    +++Y+KCGCL  AR  F+  
Sbjct: 10  SFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDST 69

Query: 118 RERNLYTWSAMIGAYSRDQR----------------------------WREVVE---LFF 146
            E N+++++ ++ AY++D +                             RE V    LF 
Sbjct: 70  EEPNVFSYNVIVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFK 129

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M + G   D F    ++ AC  C   +  K +H   +  G      V N+ +  Y K G
Sbjct: 130 RMRELGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFAVSGGFDSYSSVNNAFVTYYSKGG 187

Query: 207 KLIWARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---- 261
            L  A   F  MD  +D V+WNSMI  Y Q  E  +A  L+ +M  +  K+ + T     
Sbjct: 188 LLREAVSVFYGMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247

Query: 262 -------------------------------NILIRSYNQLGQCDVAMEMVKRMESLGIT 290
                                          + LI  Y++ G  D   +  K  + + ++
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEI-LS 306

Query: 291 PDVFTWTCMISGFAQNGRTS-QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
           PD+  W  MISG++ N   S +A+  F++M  +G  P+  +     SAC++L + + G +
Sbjct: 307 PDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQ 366

Query: 350 IHSLAVKMGF-TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           IH LA+K    ++ + V N+LI++Y K   L  A RVFD + + +  S+N MI GY Q G
Sbjct: 367 IHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHG 426

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           +  +A  L+ +M +S + PN IT+  ++S     G  DE    F  M +  K++     +
Sbjct: 427 HGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHY 486

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA----YLVASNKVKEIHG 524
           + +I     LG+        R + +  + P  V   ++L AC       +A    KE+  
Sbjct: 487 SCMI---DLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKEL-- 541

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
            ++ + L ++  VM  L + YA +G      ++   M  K I
Sbjct: 542 -MVMQPLAATPYVM--LANMYADAGKWEEMASVRKSMRGKRI 580



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 149/315 (47%), Gaps = 10/315 (3%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL 98
           +A+ +   +  +G K+   T  ++L A    + +   R+ H   +      +  V + L+
Sbjct: 223 KALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLI 282

Query: 99  SVYAKCGCLD---DAREVFEDMRERNLYTWSAMIGAYS-RDQRWREVVELFFLMVQDGLF 154
             Y+KCG  D   D+ +VF+++   +L  W+ MI  YS  ++   E V+ F  M + G  
Sbjct: 283 DFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMISGYSMNEEHSEEAVKSFRQMQRIGHR 342

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR-RVRNSVLAVYVKCGKLIWARR 213
           PDD  F  +  AC N      GK +H L IK  +   R  V N+++++Y K G L+ ARR
Sbjct: 343 PDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIPSNRISVNNALISLYYKSGNLLDARR 402

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M E + V++N MI GY Q G   EA RL+ +M    I    +TF  ++ +    G+
Sbjct: 403 VFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQRMLDSGIAPNNITFVAILSACAHCGK 462

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            D   +    M E+  I P+   ++CMI    + G+  +A      M +    P  V   
Sbjct: 463 VDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPY---KPGSVAWA 519

Query: 333 SAISACTDLKALAMG 347
           + + AC   K +A+ 
Sbjct: 520 ALLGACRKHKNMALA 534


>gi|356523117|ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14330-like [Glycine max]
          Length = 650

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 195/585 (33%), Positives = 309/585 (52%), Gaps = 52/585 (8%)

Query: 330 TITSAISACTDLKALAMG--MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
           +I+  + AC   ++L  G  + +H L  +    ++  +   LI +YS C  +  A RVF 
Sbjct: 72  SISLFLHACISRRSLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQ 131

Query: 388 MIKDKDVYS--WNSMIAGYCQAGYCGKAYELFIKMQESDVPP------------------ 427
           +  +K      W +M  GY + G+  +A  L+  M    V P                  
Sbjct: 132 IDDEKPPEEPVWVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNA 191

Query: 428 ------------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
                             + +  N L+  Y++ G  DE + +F+ M      +RN  SWN
Sbjct: 192 LVGRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMP-----QRNVVSWN 246

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           +LIAG+   G+    L  FR MQ      + +T+ ++LP CA + A +  KEIHG +L+ 
Sbjct: 247 TLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKS 306

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
              + +P++NSL+D YAK G I Y   +FD M SKD+ +WN+++ G+ ++G  H AL LF
Sbjct: 307 RKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLF 366

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
           D+M  +G++PN  TF++++   S +G+   GK++F ++ + + + P +EHY+ ++D+ GR
Sbjct: 367 DEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGR 426

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           SGK +EA+   E++P+ P  SIW +LL +CR++GN+ LA +  ERLF++EP +     ++
Sbjct: 427 SGKFDEALSVAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEPNNPGNYVML 486

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             IYA  G  ED  +VR++      +   G  WI++K+ ++TFV GG S+      Y  +
Sbjct: 487 SNIYANAGMWEDVKRVREMMALTGMKKDAGCSWIQIKHKIHTFVAGGSSDFRCSAEYKKI 546

Query: 770 QNVPENVTARSSH---SGLC---IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
            N   N      +   +G+    I EE K      HSE+LA  FALI +  A   IRI K
Sbjct: 547 WNELSNAVKNLGYVPNTGVVLHDINEEMKAVWVCEHSERLAAVFALINTG-AGMPIRITK 605

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+R+CV CH   K VS +    I L D+   HHF+NG CSC DYW
Sbjct: 606 NLRVCVDCHSWMKAVSKVTRRLIVLRDTNRFHHFENGSCSCKDYW 650



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 173/361 (47%), Gaps = 38/361 (10%)

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRR--VRNSVLAVYVKCGKLIWARRFFESMDEK 221
           L AC +    E G+ +H  +++     +    ++  ++ +Y  CG++  ARR F+  DEK
Sbjct: 77  LHACISRRSLEHGRKLHLHLLRSQNRVLENPTLKTKLITLYSVCGRVNEARRVFQIDDEK 136

Query: 222 --DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL-------- 271
             +   W +M  GY + G + EA  L+  M    +K G   F++ +++ + L        
Sbjct: 137 PPEEPVWVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGRA 196

Query: 272 ----------GQCDVAM---------------EMVKRMESLGITPDVFTWTCMISGFAQN 306
                     G+ D  +               E++K  E +    +V +W  +I+GFA  
Sbjct: 197 IHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMP-QRNVVSWNTLIAGFAGQ 255

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           GR  + L  F+ M   G+  + +T+T+ +  C  + AL  G EIH   +K     DV + 
Sbjct: 256 GRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLL 315

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           NSL++MY+KC E+   E+VFD +  KD+ SWN+M+AG+   G   +A  LF +M    + 
Sbjct: 316 NSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIE 375

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALG 486
           PN IT+  L+SG   +G   E   LF  + ++  V+ +   +  L+    + G+ + AL 
Sbjct: 376 PNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEALS 435

Query: 487 V 487
           V
Sbjct: 436 V 436



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 133/516 (25%), Positives = 232/516 (44%), Gaps = 56/516 (10%)

Query: 6   LTTFQQLHSLLTKKSNPRFR----------DTHLDFLCGNGRLNEAITVLDSI-ATQGAK 54
           L T   + + +T  S PR            ++ L  LC  G L++A+ +++S   T   +
Sbjct: 7   LPTNITVKTNITATSTPRTTNTHKHKTTPFNSTLKSLCKWGNLDKALRLIESSKPTPIEE 66

Query: 55  VRRNTYINL-LQACIDSNSIHLARKLHAFL----NLVTEIDVFVKTKLLSVYAKCGCLDD 109
                 I+L L ACI   S+   RKLH  L    N V E +  +KTKL+++Y+ CG +++
Sbjct: 67  EEEEESISLFLHACISRRSLEHGRKLHLHLLRSQNRVLE-NPTLKTKLITLYSVCGRVNE 125

Query: 110 AREVFE--DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC 167
           AR VF+  D +      W AM   YSR+    E + L+  M+   + P +F F   L+AC
Sbjct: 126 ARRVFQIDDEKPPEEPVWVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKAC 185

Query: 168 GNCGDFEAGKLMHSLVIKLGMSCVRR-VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
            +  +   G+ +H+ ++K  +    + V N++L +YV+ G      + FE M +++ V+W
Sbjct: 186 SDLDNALVGRAIHAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSW 245

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL----------GQ--- 273
           N++I+G+   G   E    F  M RE +    +T   ++    Q+          GQ   
Sbjct: 246 NTLIAGFAGQGRVFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILK 305

Query: 274 ----CDVA-----MEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDL 315
                DV      M+M  +   +G    VF         +W  M++GF+ NG+  +AL L
Sbjct: 306 SRKNADVPLLNSLMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCL 365

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK-MGFTDDVLVGNSLINMYS 374
           F EM   G+ PNG+T  + +S C+     + G  + S  ++  G    +     L+++  
Sbjct: 366 FDEMIRYGIEPNGITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILG 425

Query: 375 KCEELEAAERVFDMIKDKDVYS-WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
           +  + + A  V + I  +   S W S++   C+  Y   A    +  +  ++ PN     
Sbjct: 426 RSGKFDEALSVAENIPMRPSGSIWGSLL-NSCRL-YGNVALAEVVAERLFEIEPNNPGNY 483

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
           V++S    N    E V   + M     +K++   SW
Sbjct: 484 VMLSNIYANAGMWEDVKRVREMMALTGMKKDAGCSW 519



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 172/367 (46%), Gaps = 36/367 (9%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P+   W  M  G+++NG + +AL L+++M    V P     + A+ AC+DL    +G  I
Sbjct: 138 PEEPVWVAMAIGYSRNGFSHEALLLYRDMLSCCVKPGNFAFSMALKACSDLDNALVGRAI 197

Query: 351 HSLAVKMGFTD-DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           H+  VK    + D +V N+L+ +Y +    +   +VF+ +  ++V SWN++IAG+   G 
Sbjct: 198 HAQIVKHDVGEADQVVNNALLGLYVEIGCFDEVLKVFEEMPQRNVVSWNTLIAGFAGQGR 257

Query: 410 CGKAYELFIKMQESDVPPNVITWNVL---------------ISGYIQNGNEDEAVDLFQR 454
             +    F  MQ   +  + IT   +               I G I    ++  V L   
Sbjct: 258 VFETLSAFRVMQREGMGFSWITLTTMLPVCAQVTALHSGKEIHGQILKSRKNADVPLLNS 317

Query: 455 M----------GKNDKV-----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
           +          G  +KV      ++  SWN+++AG+   GQ + AL +F +M      PN
Sbjct: 318 LMDMYAKCGEIGYCEKVFDRMHSKDLTSWNTMLAGFSINGQIHEALCLFDEMIRYGIEPN 377

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
            +T +++L  C++   +++ K +   V++   ++ SL     L+D   +SG    + ++ 
Sbjct: 378 GITFVALLSGCSHSGLTSEGKRLFSNVMQDFGVQPSLEHYACLVDILGRSGKFDEALSVA 437

Query: 559 DGMSSKDIIT-WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR-GTFLSIILAHSLAGM 616
           + +  +   + W SL+    L+G  + AL      + F ++PN  G ++ +   ++ AGM
Sbjct: 438 ENIPMRPSGSIWGSLLNSCRLYG--NVALAEVVAERLFEIEPNNPGNYVMLSNIYANAGM 495

Query: 617 VDLGKKV 623
            +  K+V
Sbjct: 496 WEDVKRV 502


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 196/578 (33%), Positives = 303/578 (52%), Gaps = 37/578 (6%)

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P      S I+AC   K LA    IHS   +     D  + NSLI+MY KC  +  A  V
Sbjct: 60  PTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHV 119

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG-- 443
           FD I  +DV SW  +I GY Q     +A  L   M  +   P+  T+   +      G  
Sbjct: 120 FDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGR 179

Query: 444 -------------NEDEAV-------DLFQRMGKNDKVKR--------NTASWNSLIAGY 475
                        N DE V       D++ R  + D   R        N  SWN+LIAG+
Sbjct: 180 GIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGF 239

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
            + G     L  F +MQ + F     T  SV  A A + A  + + +H  +++   + + 
Sbjct: 240 ARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTA 299

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            V N+++  YAKSG++V +R +FD +  +D++TWN+++  +  +G    A+  F++++ +
Sbjct: 300 FVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKY 359

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           G++ N+ TFLS++ A S  G+V  GK+ F  + + Y + P I+HY + +DL GR+G L+E
Sbjct: 360 GIQLNQITFLSVLTACSHGGLVKEGKQYF-DMMKDYNVEPEIDHYVSFVDLLGRAGLLKE 418

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A+ F+  MP+EP +++W ALL ACR+H N  +   A + +F+L+P D     L+  IYA 
Sbjct: 419 ALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVLLYNIYAS 478

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN 775
            G+ +DA +VRK+ +    +      W+E++N V+ FV    +   S+ +Y   + V   
Sbjct: 479 TGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPKSEEIYRMWEEVNTR 538

Query: 776 V-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
           +        + +  L I+E+E+E     HSEK+ALAFALI +  A  TIRI+KNIR+C  
Sbjct: 539 IKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALI-NMPAGATIRIMKNIRICGD 597

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   +YVS +   EI + D+   HHF NG CSCGDYW
Sbjct: 598 CHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/462 (24%), Positives = 208/462 (45%), Gaps = 44/462 (9%)

Query: 45  LDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAK 103
           LD + T         Y +++ AC  S ++  AR +H+ L+      D F+   L+ +Y K
Sbjct: 50  LDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCK 109

Query: 104 CGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKI 163
           CG + DAR VF+ +  R++ +W+ +I  Y+++    E + L   M++    P  F F   
Sbjct: 110 CGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSF 169

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG 223
           L+A G CG    G+ MH+L +K  +     V +++L +Y +C ++  A R F+ +D K+ 
Sbjct: 170 LKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNE 229

Query: 224 VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD----VAME 279
           V+WN++I+G+ + G+ +     F +M R        T++ +  +  ++G  +    V   
Sbjct: 230 VSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAH 289

Query: 280 MVKRMESLGI---------------------------TPDVFTWTCMISGFAQNGRTSQA 312
           M+K  + L                               D+ TW  M++ FAQ G   +A
Sbjct: 290 MIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEA 349

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
           +  F+E+   G+  N +T  S ++AC+    +  G +   +        ++    S +++
Sbjct: 350 VAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDL 409

Query: 373 YSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK----AYELFIKMQESDVPP 427
             +   L EA   VF M  +     W +++ G C+     K    A +   ++   D  P
Sbjct: 410 LGRAGLLKEALIFVFKMPMEPTAAVWGALL-GACRMHKNAKIGQYAADHVFELDPEDTGP 468

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
            V+ +N+    Y   G  D+A  + ++M K   VK+  A SW
Sbjct: 469 PVLLYNI----YASTGQWDDAARV-RKMMKATGVKKEPACSW 505



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/359 (24%), Positives = 162/359 (45%), Gaps = 44/359 (12%)

Query: 226 WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME 285
           ++S+I+   Q      A  +   + R  +       N LI  Y + G    A  +   + 
Sbjct: 65  YHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIP 124

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
               T DV +WT +I+G+AQN   ++AL L  +M      P+G T TS + A        
Sbjct: 125 ----TRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRG 180

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
           +G ++H+LAVK    +DV VG++L++MY++C++++ A RVFD +  K+  SWN++IAG+ 
Sbjct: 181 IGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFA 240

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITW--------------------------------- 432
           + G        F +MQ +       T+                                 
Sbjct: 241 RKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAF 300

Query: 433 --NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
             N ++  Y ++G+  +A  +F R+ + D V     +WN+++  + Q G    A+  F +
Sbjct: 301 VANTILGMYAKSGSMVDARKVFDRVDQRDLV-----TWNTMLTAFAQYGLGKEAVAHFEE 355

Query: 491 MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           ++      N +T LSVL AC++     + K+    +   ++E  +    S +D   ++G
Sbjct: 356 IRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAG 414



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 163/356 (45%), Gaps = 5/356 (1%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLL 98
           EA+ +L  +     +    T+ + L+A        +  ++HA  +    + DV+V + LL
Sbjct: 146 EALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALL 205

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +YA+C  +D A  VF+ +  +N  +W+A+I  ++R       +  F  M ++G     F
Sbjct: 206 DMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHF 265

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
            +  +  A    G  E G+ +H+ +IK G      V N++L +Y K G ++ AR+ F+ +
Sbjct: 266 TYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRV 325

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
           D++D V WN+M++ + Q G   EA   F+++ +  I+L  +TF  ++ + +  G      
Sbjct: 326 DQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGK 385

Query: 279 EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
           +    M+   + P++  +   +    + G   +AL    +M    + P      + + AC
Sbjct: 386 QYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVFKMP---MEPTAAVWGALLGAC 442

Query: 339 TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
              K   +G        ++   +D      L N+Y+   + + A RV  M+K   V
Sbjct: 443 RMHKNAKIGQYAADHVFELD-PEDTGPPVLLYNIYASTGQWDDAARVRKMMKATGV 497


>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
 gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
          Length = 848

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 235/846 (27%), Positives = 420/846 (49%), Gaps = 82/846 (9%)

Query: 10  QQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACID 69
           QQ+   L+  ++    D  +  L   G+  +A   L   +       R TY +LL+AC  
Sbjct: 5   QQISRKLSNLAHSDLIDPKIVTLVQQGQYVDA---LQFYSRNPLNATRFTYPSLLKACGF 61

Query: 70  SNSIHLARKLHAFLNLVTE----IDVFVKTKLLSVYAKCGCLDDAREVFEDMRE-----R 120
            +++   + +H+   ++T+     D ++ T L++ Y KCG   +A +VF+ + E     +
Sbjct: 62  LSNLQYGKTIHS--TIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQ 119

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           ++  W++++  Y R    +E +  F  M   G+ PD +    +L A    G     K +H
Sbjct: 120 DVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCILLGASD--GHLGYAKQIH 177

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV-AWNSMISGYFQIGEN 239
              ++        + + ++ +Y  CG+ + A R F+ +++K  V AWN MI G+ + G  
Sbjct: 178 GYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLW 237

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT---- 295
           + +  ++     E +KL   +F   + +  Q       M++   +  LG   D +     
Sbjct: 238 ENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSL 297

Query: 296 ---------------------------WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
                                      W  MIS +  NGR+   L ++K+M  + + P+ 
Sbjct: 298 LTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDS 357

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
           +T T+ +S+C  + +   G  IH+  VK     +V + ++L+ MYSKC   + A  +F+ 
Sbjct: 358 LTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNT 417

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM------QESDVPPNVIT---------WN 433
           IK +DV +W SMI+G+CQ     +A E +  M       +SD+  +V++           
Sbjct: 418 IKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLG 477

Query: 434 VLISGY-IQNGNEDEA------VDL-----FQRMGKN---DKVKRNTASWNSLIAGYQQL 478
             I G  I++G E +       VD+     F +M  N   D   +N  +WNS+I+ Y + 
Sbjct: 478 CTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRN 537

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           G  + ++ +F +M     +P+ V+I SVL + + +    K K +HG ++R+ + S L + 
Sbjct: 538 GLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLRKGKAVHGYLIRQRIPSDLQLE 597

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           N+LID Y K G + Y++ IF  M   +++TWN +I G   HG W  A+ LFD+M+SFG+ 
Sbjct: 598 NALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCGSHGDWLKAMSLFDEMRSFGIA 657

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           P+  TF+S++ + +  G ++ G K+F  +T  + I P +EHY  ++DL GR+G+L++A  
Sbjct: 658 PDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRMEHYVNIVDLLGRAGRLDDAYA 717

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP--GDVLIQRLILQIYAIC 716
           F++++PIEPD SIW +LL +CR+H N++L  LA  +L D+EP  G   +Q  +L +Y   
Sbjct: 718 FVKNLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLDIEPSRGSNYVQ--LLNLYGEN 775

Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV 776
              + A  +R   +E   + + G  WIEV N +  F +G  S   +  +Y  L ++  N+
Sbjct: 776 ELQDRAANLRASMKEKGLKKTPGCSWIEVGNSIDVFFSGDSSSPRTIEIYDLLNSLRRNM 835

Query: 777 TARSSH 782
             +  H
Sbjct: 836 RKKGGH 841


>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 212/699 (30%), Positives = 347/699 (49%), Gaps = 67/699 (9%)

Query: 133 SRDQRWREVVELFF-LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCV 191
           S    W+E ++L+  + +      D ++ P IL+AC N   F  G  MH  +IK G    
Sbjct: 23  SYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNT-SFNLGTAMHGCLIKQGCQSS 81

Query: 192 RRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR 251
             + NS +  Y+K G L  A+R F+S   KD V+WN M+ G F  G        F K   
Sbjct: 82  TSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRF 141

Query: 252 EEIKLGVVTFNILIRSYNQLG------------------------------QCDVAMEMV 281
              +  + +  ++I+++ +L                                 +V M   
Sbjct: 142 AHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEVHMYFA 201

Query: 282 -KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACT 339
            K    + +  DV +W+ MI GF Q G   Q   +F+ M +  G+ P+GVT+ S + ACT
Sbjct: 202 YKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACT 261

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           +LK +++G  +H L +  G  DD+ VGNSLI+MYSKC  + +A + F  I +K++ SWN 
Sbjct: 262 NLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNL 321

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-NVL--------------ISGYI-QNG 443
           M++ Y       +A  L   M       + +T  NVL              + G I + G
Sbjct: 322 MLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKG 381

Query: 444 NE------DEAVDLFQ--------RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
            E      +  +D +         RM  +   K++  +W+++IAG+ + G+ + A+ VF+
Sbjct: 382 YESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFK 441

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           +M      PN V+I++++ ACA      + K  HG  +RR L S + +  S+ID Y+K G
Sbjct: 442 QMNEEVI-PNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAIGTSIIDMYSKCG 500

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
           +I  S   F+ +  K+++ W+++I  + ++G  H AL LF+++K  G KPN  T LS++ 
Sbjct: 501 DIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLS 560

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP--IEP 667
           A S  G+++ G   F S+ + + I P +EHYS ++D+  R+GK  EA+E IE +P  +E 
Sbjct: 561 ACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEA 620

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
            +SIW  LL++CR +GNI L   A  R+  LEP       L   +YA CG   D+ K+R+
Sbjct: 621 GASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKMRR 680

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
           L +E   +   G   + + +  + FV G      +D +Y
Sbjct: 681 LAKEKGVKVVAGYSLVHINSQTWRFVAGDVLNPRADEIY 719



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 146/564 (25%), Positives = 241/564 (42%), Gaps = 98/564 (17%)

Query: 306 NGRTSQALDLFKEMSFVGV-MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           +G   +AL L+ E+   G  + +   + S + AC++  +  +G  +H   +K G      
Sbjct: 25  SGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSN-TSFNLGTAMHGCLIKQGCQSSTS 83

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
           + NS I+ Y K  +L++A+R FD  K+KD  SWN M+ G    G        FIK + + 
Sbjct: 84  IANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAH 143

Query: 425 VPPNVITWNVLIS---------------GYI-----------QNG--------NEDEAVD 450
             PN+ +  ++I                GYI           QN         +   A  
Sbjct: 144 FQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEVHMYFAYK 203

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC-FYPNCVTILSVLPA 509
           LF  M     V+ +  SW+ +I G+ Q+G+      +FR M +     P+ VT++SVL A
Sbjct: 204 LFGEM----SVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKA 259

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           C  L   +    +HG V+ R LE  L V NSLID Y+K  N+  +   F  +  K+II+W
Sbjct: 260 CTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISW 319

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGT----------FLSIILAHSLAGMV-- 617
           N ++  Y+L+     AL L   M   G + +  T          FL  +   S+ G++  
Sbjct: 320 NLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIR 379

Query: 618 ---DLGKKVFCSITECYQIIPMIE---------------HYSAMIDLYGRSGKLEEAMEF 659
              +  + +  S+ + Y    ++E                +S MI  + R+GK +EA+  
Sbjct: 380 KGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISV 439

Query: 660 IEDMPIE--PDSSIWEALLTACRIHGNIDLAV----LAIERLFDLEPGDVLIQRLILQIY 713
            + M  E  P++     L+ AC +   +  +     +A+ R       +V I   I+ +Y
Sbjct: 440 FKQMNEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGL---ASEVAIGTSIIDMY 496

Query: 714 AICGKPEDALKV-RKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN- 771
           + CG  E +++   ++ ++N        CW     ++  F   G +     L     QN 
Sbjct: 497 SKCGDIEASIRAFNQIPQKNV------VCW---SAMISAFRINGLAHEALMLFEKIKQNG 547

Query: 772 -VPENVTARS-----SHSGLCIEE 789
             P  VTA S     SH GL IEE
Sbjct: 548 TKPNAVTALSLLSACSHGGL-IEE 570


>gi|357116278|ref|XP_003559909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Brachypodium distachyon]
          Length = 585

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 190/533 (35%), Positives = 301/533 (56%), Gaps = 22/533 (4%)

Query: 346 MGMEIHSLAVKMGFTD-DVLVGNSLINMYSKCE--ELEAAERVFDMIKDKDVYSWNSMIA 402
           +G  +H+ A++ GF   D+ V  +L+ MY+K    E+  A   FD    +DV+  N M+A
Sbjct: 65  LGASLHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLA 124

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
            Y   G   +A ++F  M   D+    ++WN +I GY   G+   A ++F   G  D   
Sbjct: 125 AYVARGEVAEARKVFDGMSGRDL----VSWNTMIHGYAVRGDVGMAREIFD--GTRD--- 175

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
           R+  SW+S+I+ Y +      AL ++R+M+ +   P+C++++SVL AC+ + A     E+
Sbjct: 176 RDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEV 235

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           H  V    +E  + +  +L+D YAK G+I  S  +F  M  KD++TW+S+I G   HG  
Sbjct: 236 HRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLG 295

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
           H AL LF +M S GL+PN  TF+ +++A +  G+V+ GKK F S+++ + ++P +EHY  
Sbjct: 296 HDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPRMEHYGC 355

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           M+DL GR+G +EEAME I  M  +PD  IW  LL ACRIH N+++A  A+ +L  L+P  
Sbjct: 356 MVDLLGRAGHVEEAMELIRSMTFKPDPIIWRTLLGACRIHKNVEIAEEAMAKLKVLDPLA 415

Query: 703 VLIQRLILQIYAICGKPEDALKVRK-LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
                L+  IYA     E   ++RK + REN +R   G+  IE +N V+ FV+G  S   
Sbjct: 416 DGHYVLLSNIYAQANSWEGVAEMRKTIRRENIQRVP-GRSSIEWENTVHEFVSGDRSHPR 474

Query: 762 SDLLYSWLQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLALAFALIGSSQA 815
            + +Y  L+ + + +  ++ +  +       I+E+ K+     HSEKLA+AF L+  + A
Sbjct: 475 IEEIYKMLEEMMDRLR-QAGYRPMTSLVLQDIDEQSKKRALAEHSEKLAIAFGLL-VTPA 532

Query: 816 PHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             T+RI KN+R C  CH   K +S+ +  ++ + D    HHF  GQCSC DYW
Sbjct: 533 RSTLRITKNLRACEDCHSAIKLISLAYDRKLIVRDRNRFHHFSEGQCSCKDYW 585



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 170/343 (49%), Gaps = 24/343 (6%)

Query: 176 GKLMHSLVIKLGMSCVRR-VRNSVLAVYVK--CGKLIWARRFFESMDEKDGVAWNSMISG 232
           G  +H+  ++ G +     VR +++ +Y K   G++  AR  F+    +D    N M++ 
Sbjct: 66  GASLHARALRSGFAAADLFVRTALVEMYAKTAAGEIALARAAFDEAPRRDVFLCNVMLAA 125

Query: 233 YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
           Y   GE  EA ++FD M   ++    V++N +I  Y   G   +A E+           D
Sbjct: 126 YVARGEVAEARKVFDGMSGRDL----VSWNTMIHGYAVRGDVGMAREIFDGTRD----RD 177

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
            F+W+ MIS +A+   + +AL+L++EM   GV P+ +++ S +SAC+ + ALA+G E+H 
Sbjct: 178 AFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGALAIGAEVHR 237

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
                    D+ +G +L++MY+KC ++E + +VF  +  KDV +W+SMI G    G    
Sbjct: 238 FVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGLANHGLGHD 297

Query: 413 AYELFIKMQESDVPPNVITW-NVLIS----GYIQNGNEDEAVDLFQRMGKNDKVKRNTAS 467
           A  LF +M    + PN IT+  VLI+    G + +G +      F  M     V      
Sbjct: 298 ALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKK-----YFSSMSDVHGVVPRMEH 352

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +  ++    + G    A+ + R M    F P+ +   ++L AC
Sbjct: 353 YGCMVDLLGRAGHVEEAMELIRSM---TFKPDPIIWRTLLGAC 392



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 166/344 (48%), Gaps = 14/344 (4%)

Query: 56  RRNTYI--NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREV 113
           RR+ ++   +L A +    +  ARK+    + ++  D+     ++  YA  G +  ARE+
Sbjct: 113 RRDVFLCNVMLAAYVARGEVAEARKV---FDGMSGRDLVSWNTMIHGYAVRGDVGMAREI 169

Query: 114 FEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF 173
           F+  R+R+ ++WS+MI AY++ +  +E +EL+  M   G+ PD      +L AC   G  
Sbjct: 170 FDGTRDRDAFSWSSMISAYAKGRCSKEALELWREMRVAGVAPDCISMVSVLSACSAMGAL 229

Query: 174 EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
             G  +H  V    +    ++  +++ +Y KCG +  + + F +M  KD + W+SMI G 
Sbjct: 230 AIGAEVHRFVESNRVEVDMKLGTALVDMYAKCGDIENSLKVFHAMPVKDVLTWSSMIIGL 289

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPD 292
              G   +A  LF +M  + ++   +TF  ++ +   +G  +   +    M  + G+ P 
Sbjct: 290 ANHGLGHDALSLFSEMISQGLQPNEITFIGVLIACTHVGLVNDGKKYFSSMSDVHGVVPR 349

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           +  + CM+    + G   +A++L + M+F    P+ +   + + AC   K + +  E  +
Sbjct: 350 MEHYGCMVDLLGRAGHVEEAMELIRSMTF---KPDPIIWRTLLGACRIHKNVEIAEEAMA 406

Query: 353 LAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDMIKDKDV 394
              K+   D +  G+ ++  N+Y++    E    +   I+ +++
Sbjct: 407 ---KLKVLDPLADGHYVLLSNIYAQANSWEGVAEMRKTIRRENI 447


>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 210/616 (34%), Positives = 329/616 (53%), Gaps = 59/616 (9%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           DV +    I+ F +      A ++F++MS    +   VT  + +S  T  K      E H
Sbjct: 72  DVVSLNKTIASFVRACDLESARNVFEKMS----VRTTVTWNTMLSGYT--KVAGKVKEAH 125

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
            L  K+   D V   N ++  Y +   +EAA   F+ +  KD+ SWN++I+G+ Q G   
Sbjct: 126 ELFDKIPEPDSVSY-NIMLVCYLRSYGVEAALAFFNKMPVKDIASWNTLISGFAQNGQMQ 184

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMG--------------- 456
           KA++LF  M E     N ++W+ +ISGY+++G+ + A +L++ +G               
Sbjct: 185 KAFDLFSVMPEK----NGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYM 240

Query: 457 KNDKVK-----------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           K  KV+           +N  +WNS+IAGY +  +  + L VF+ M  S   PN +++ S
Sbjct: 241 KFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSS 300

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           VL  C+ L A    +++H  V +  L        SLI  Y K G++  +  +F  M  KD
Sbjct: 301 VLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKD 360

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
           +I+WN++I GY  HG    AL LFD+M++  +KP+  TF+++ILA + AG VDLG + F 
Sbjct: 361 VISWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFK 420

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
           S+ + + I     HY+ +IDL GR+G+L+EA+  I++MP +P ++I+  LL ACRIH N+
Sbjct: 421 SMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNL 480

Query: 686 DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV 745
           DLA  A   L +L+P        +  IYA   K +   KVRK+ +E+      G  WIE+
Sbjct: 481 DLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEI 540

Query: 746 KNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------------IEEEEKE 793
           K++ + F +       SD L+  L ++ + +        L             +EEE KE
Sbjct: 541 KSVTHEFRS-------SDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKE 593

Query: 794 EISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
           ++   HSEKLA+AF L+ +  AP T IR+ KN+R+C  CH   K++S +   EI + D+ 
Sbjct: 594 KLLLWHSEKLAIAFGLMKT--APGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTT 651

Query: 853 CLHHFKNGQCSCGDYW 868
             HHF+NG CSCGDYW
Sbjct: 652 RFHHFRNGFCSCGDYW 667



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 222/448 (49%), Gaps = 32/448 (7%)

Query: 74  HLARKLHAF--------LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTW 125
           H  R++H          L++ T  DV    K ++ + +   L+ AR VFE M  R   TW
Sbjct: 48  HPPRRIHLVSPNNVTPNLHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTW 107

Query: 126 SAMIGAYSR-DQRWREVVELFFLMVQDGLFPDDFLFPKILQAC--GNCGDFEAGKLMHSL 182
           + M+  Y++   + +E  ELF     D +   D +   I+  C   + G   A    + +
Sbjct: 108 NTMLSGYTKVAGKVKEAHELF-----DKIPEPDSVSYNIMLVCYLRSYGVEAALAFFNKM 162

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
            +K   S      N++++ + + G++  A   F  M EK+GV+W++MISGY + G+ + A
Sbjct: 163 PVKDIASW-----NTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHGDLEAA 217

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
             L+  +  +     VV    ++  Y + G+ ++A  + +RM       ++ TW  MI+G
Sbjct: 218 EELYKNVGMK----SVVVETAMLTGYMKFGKVELAERIFQRMA----VKNLVTWNSMIAG 269

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           + +N R    L +FK M    V PN ++++S +  C++L AL +G ++H L  K   + D
Sbjct: 270 YVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKD 329

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
                SLI+MY KC +L++A ++F  +  KDV SWN+MI+GY Q G   KA  LF KM+ 
Sbjct: 330 TTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRN 389

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
             + P+ IT+  +I      G  D  V  F+ M K   ++     +  +I    + G+ +
Sbjct: 390 GTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLD 449

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPAC 510
            A+ + ++M    F P+     ++L AC
Sbjct: 450 EAVSLIKEMP---FKPHAAIYGTLLGAC 474



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/220 (21%), Positives = 108/220 (49%), Gaps = 20/220 (9%)

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
           P   +LV+ N V       L     S +  +N  I ++ ++ ++  +R +F+ MS +  +
Sbjct: 50  PRRIHLVSPNNVTP----NLHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTV 105

Query: 568 TWNSLICGYV-LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
           TWN+++ GY  + G    A +LFD++     +P+  ++  +++ +  +  V+     F  
Sbjct: 106 TWNTMLSGYTKVAGKVKEAHELFDKIP----EPDSVSYNIMLVCYLRSYGVEAALAFFNK 161

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
           +      +  I  ++ +I  + ++G++++A +    MP E +   W A+++    HG+++
Sbjct: 162 MP-----VKDIASWNTLISGFAQNGQMQKAFDLFSVMP-EKNGVSWSAMISGYVEHGDLE 215

Query: 687 LAVLAIERLF-DLEPGDVLIQRLILQIYAICGKPEDALKV 725
               A E L+ ++    V+++  +L  Y   GK E A ++
Sbjct: 216 ----AAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERI 251


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 202/600 (33%), Positives = 312/600 (52%), Gaps = 36/600 (6%)

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           + F       +A+     M   GV  + +T +  I  C+   A+  G  +H      G+ 
Sbjct: 28  ANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYE 87

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
             + V N+L+NMY K   LE AE +FD + +++V SW +MI+ Y       KA +  I M
Sbjct: 88  PKMFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYSNK-LNDKALKCLILM 146

Query: 421 QESDVPPNVITWNVLIS-------------GYIQNGNEDEAV-------------DLFQR 454
               V PN+ T++ ++              G I+ G E +               DL   
Sbjct: 147 FREGVRPNMFTYSSVLRACDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNA 206

Query: 455 MGKNDKVK-RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
           +G  D++  R+   WNS+I G+ Q    N AL +F++M+ + F  +  T+ SVL AC  L
Sbjct: 207 LGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGL 266

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
                 +++H  VL+   +  L + N+LID Y K G++  + + F  M  KD+I+W++++
Sbjct: 267 ALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMV 324

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQI 633
            G   +G+   AL+LF+ MK  G +PN  T L ++ A S AG+V+ G   F S+ + + +
Sbjct: 325 AGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGV 384

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
            P  EHY  +IDL GR+G+L+EA++ I +M  EPDS  W  LL ACR+H N+DLA+ A +
Sbjct: 385 DPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAK 444

Query: 694 RLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFV 753
           ++ +LEP D     L+  IYA   + ED  +VRK       R + G  WIEV   ++ F+
Sbjct: 445 KIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQIHVFI 504

Query: 754 TGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFA 808
            G  S    + +   L ++ E V        ++     +E E+KE+    HSEKLA+ F 
Sbjct: 505 LGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKLAIMFG 564

Query: 809 LIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           L+  S+   T+RI KN+R+C  CH  AK VS M H  I + D    HHF++G CSCGDYW
Sbjct: 565 LMNLSREK-TVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSCGDYW 623



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 191/391 (48%), Gaps = 34/391 (8%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M + G+F D   + ++++ C   G  + GK +H  +   G      V N++L +YVK   
Sbjct: 46  MERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNL 105

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           L  A   F+ M E++ V+W +MIS Y     ND+A +    M RE ++  + T++ ++R+
Sbjct: 106 LEEAEDLFDEMPERNVVSWTTMISAYSN-KLNDKALKCLILMFREGVRPNMFTYSSVLRA 164

Query: 268 YNQLGQ-----------------------CDVAMEMVKRMESLGI-----TPDVFTWTCM 299
            + L                          DV  +      +LG+     T D+  W  +
Sbjct: 165 CDGLPNLRQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSI 224

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I GFAQN   ++AL+LFK M   G + +  T+TS + ACT L  L +G ++H   +K  F
Sbjct: 225 IGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--F 282

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             D+++ N+LI+MY KC  LE A   F  + +KDV SW++M+AG  Q GY  +A ELF  
Sbjct: 283 DQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAGLAQNGYSRQALELFES 342

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M+ES   PN IT   ++      G  ++    F+ M K   V      +  LI    + G
Sbjct: 343 MKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKLFGVDPGREHYGCLIDLLGRAG 402

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           + + A+ +  +M+     P+ VT  ++L AC
Sbjct: 403 RLDEAVKLIHEMECE---PDSVTWRTLLGAC 430



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 194/411 (47%), Gaps = 45/411 (10%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EID 90
            C    L+ A+  +D++   G      TY  L++ C    ++   +++H  +     E  
Sbjct: 30  FCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPK 89

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +FV   LL++Y K   L++A ++F++M ERN+ +W+ MI AYS ++   + ++   LM +
Sbjct: 90  MFVVNTLLNMYVKFNLLEEAEDLFDEMPERNVVSWTTMISAYS-NKLNDKALKCLILMFR 148

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           +G+ P+ F +  +L+AC    +    + +H  +IK G+     VR++++ VY K   L  
Sbjct: 149 EGVRPNMFTYSSVLRACDGLPNL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDN 205

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR------------------- 251
           A   F+ M  +D V WNS+I G+ Q  + +EA  LF +M R                   
Sbjct: 206 ALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTG 265

Query: 252 -------EEIKLGVVTF-------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                   ++ + V+ F       N LI  Y + G  + A     RM    +  DV +W+
Sbjct: 266 LALLELGRQVHVHVLKFDQDLILNNALIDMYCKCGSLEDANSAFSRM----VEKDVISWS 321

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG-MEIHSLAVK 356
            M++G AQNG + QAL+LF+ M   G  PN +T+   + AC+    +  G     S+   
Sbjct: 322 TMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMKKL 381

Query: 357 MGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQ 406
            G          LI++  +   L EA + + +M  + D  +W +++ G C+
Sbjct: 382 FGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLL-GACR 431


>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 205/689 (29%), Positives = 356/689 (51%), Gaps = 53/689 (7%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           ++F+ +KL+S+YA       + E+F+++  R+ + W+++I A+  +  +   ++ +  M 
Sbjct: 66  NIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWNSIIKAHFSNGEYSRALDFYQWMR 125

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM-SCVRRVRNSVLAVYVKCGKL 208
                P+ F  P I+ +C        G+ +H LV KLG+ S    V +S + +Y KCG L
Sbjct: 126 ASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGVL 185

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGEND-------EAHR----------------- 244
             A   F+ +  +D VAW +++ G  Q GE+        E HR                 
Sbjct: 186 EEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTLEGGF 245

Query: 245 --------LFDKMCREE--IKLGV----VTFNILIRSYNQLGQCDVAMEMVKRMESLGIT 290
                   L +  C     +K G+    V  ++L+  Y++ G  + A      +    + 
Sbjct: 246 QACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEV----LN 301

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
            D+ +WT MIS +++ G  ++ +D+F EM   G+ P+G+ I+  +S+ ++   +      
Sbjct: 302 KDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAF 361

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H L ++  +T D +V N+L++MY K   L+ AE+ F  + +++  +WN M++GY   G  
Sbjct: 362 HGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGY---GAT 418

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
             A  +   M ++ +  NV   N LI  Y ++GN   A  +F R      + R+  +WN+
Sbjct: 419 HLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCR------IPRDIVTWNT 472

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           LI+ Y   G    AL ++ KM      PN  T++SVL AC++L +  + +++H  +    
Sbjct: 473 LISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYINGGK 532

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
            E +L +  +LID YAK G +  SR IF+ M  +D+ITWN +I GY +HG   +A++ F 
Sbjct: 533 FEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEFFQ 592

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           QM+    KPN  TFL+++ A + AG+V  GK +F  + + Y + P ++HY+ M+DL GRS
Sbjct: 593 QMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQD-YSVAPNLKHYACMVDLLGRS 651

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           G L+EA   +  MPI PD  +W ALL++C+IH  I++ +   +   D +  +     +I 
Sbjct: 652 GNLQEAEALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVENDGYYVMIS 711

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFG 739
            +Y+  GK E+A K R + +E   R   G
Sbjct: 712 NMYSSIGKWEEAEKARGIMKERGVRKKTG 740



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 218/418 (52%), Gaps = 11/418 (2%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV--FVKTKL 97
           E +  +  I   G +    T     QAC +  ++   R LH  + + T +D    V++ L
Sbjct: 221 ECLCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLV-VKTGMDYSQVVQSLL 279

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           LS+Y+KCG  ++A   F ++  +++ +W++MI AYSR     E +++F+ M+  G++PD 
Sbjct: 280 LSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDG 339

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
            +   +L +  N       K  H L+I+   +  + V+N++L++Y K G L  A +FF  
Sbjct: 340 IVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGR 399

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
           ++E++  AWN M+SGY   G    A  +   M +  +   V   N LI  Y + G   +A
Sbjct: 400 VNEQNFEAWNLMVSGY---GATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIA 456

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
             +  R     I  D+ TW  +IS +A  G  ++AL L+ +M    + PN  T+ S +SA
Sbjct: 457 RRIFCR-----IPRDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVSVLSA 511

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C+ L +L  G ++H+      F  ++ +  +LI+MY+KC +LE +  +F+ + ++DV +W
Sbjct: 512 CSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITW 571

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           N MI+GY   G    A E F +M+ES   PN +T+  ++S     G   E   LF +M
Sbjct: 572 NVMISGYGMHGDARSAIEFFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKM 629



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 158/328 (48%), Gaps = 14/328 (4%)

Query: 72  SIHLARKLHAFL--NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMI 129
           + HLAR +H ++  NL+ E +V V   L+ +Y K G L  AR +F  +  R++ TW+ +I
Sbjct: 417 ATHLARSIHCYMIKNLMDE-NVSVNNSLIDMYGKSGNLTIARRIFCRI-PRDIVTWNTLI 474

Query: 130 GAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMS 189
            +Y+    + E + L+  MV + L P+      +L AC +    E G+ +H+ +      
Sbjct: 475 SSYAHCGHFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYINGGKFE 534

Query: 190 CVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
               +  +++ +Y KCG+L  +R  F SM E+D + WN MISGY   G+   A   F +M
Sbjct: 535 FNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEFFQQM 594

Query: 250 CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT 309
                K   +TF  ++ +    G       +  +M+   + P++  + CM+    ++G  
Sbjct: 595 EESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYACMVDLLGRSGNL 654

Query: 310 SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD---VLVG 366
            +A  L   M    + P+G    + +S+C     + MG+ I   A+     +D   V++ 
Sbjct: 655 QEAEALVLSMP---ISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIDSDVENDGYYVMIS 711

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDV 394
               NMYS   + E AE+   ++K++ V
Sbjct: 712 ----NMYSSIGKWEEAEKARGIMKERGV 735



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/473 (21%), Positives = 198/473 (41%), Gaps = 87/473 (18%)

Query: 339 TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN 398
             + +L   ++ H+  +  G+++++ + + LI++Y+   +   +  +FD I  +D + WN
Sbjct: 43  NQISSLKTLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFLWN 102

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-------------------- 438
           S+I  +   G   +A + +  M+ S+  PN  T  ++++                     
Sbjct: 103 SIIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKL 162

Query: 439 ----------------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
                           Y + G  +EA  +F  +     + R+  +W +L+ G  Q G+  
Sbjct: 163 GLFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEI-----LFRDVVAWTALVIGCVQNGESK 217

Query: 483 NALGVFRKMQ---SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
             L    +M         PN  T+     AC  L A  + + +HG V++  ++ S  V +
Sbjct: 218 MGLECLCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQS 277

Query: 540 SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
            L+  Y+K GN   +   F  + +KDII+W S+I  Y   G+    +D+F +M   G+ P
Sbjct: 278 LLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYP 337

Query: 600 NRGTFLSIILAHSLAGMVDLGKKVFCS--ITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
           + G  +S +L+     M     K F    I   Y +  M++  +A++ +Y + G L+ A 
Sbjct: 338 D-GIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQ--NALLSMYCKFGFLKLAE 394

Query: 658 EFIEDMPIEPDSSIWEALLT-------ACRIH-------------------------GNI 685
           +F   +  E +   W  +++       A  IH                         GN+
Sbjct: 395 KFFGRVN-EQNFEAWNLMVSGYGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNL 453

Query: 686 DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR-KLERENTRRNS 737
            +A     R+F   P D++    ++  YA CG   +AL +  K+  E+ + NS
Sbjct: 454 TIA----RRIFCRIPRDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNS 502



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 2/198 (1%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           G   EA+++ D +  +  K    T +++L AC    S+    K+H ++N    E ++ + 
Sbjct: 481 GHFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIA 540

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T L+ +YAKCG L+ +RE+F  M ER++ TW+ MI  Y      R  +E F  M +    
Sbjct: 541 TALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEFFQQMEESSAK 600

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+   F  +L AC + G  + GK +   +    ++   +    ++ +  + G L  A   
Sbjct: 601 PNGLTFLAVLSACAHAGLVKEGKYLFGKMQDYSVAPNLKHYACMVDLLGRSGNLQEAEAL 660

Query: 215 FESMD-EKDGVAWNSMIS 231
             SM    DG  W +++S
Sbjct: 661 VLSMPISPDGGVWGALLS 678


>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 800

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 232/803 (28%), Positives = 391/803 (48%), Gaps = 79/803 (9%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           Y+ L ++C     + L   LH+ L LVT +  D    TKL+  Y++ GCL  ++ VFE  
Sbjct: 4   YMPLFRSCTSLRPLTL---LHSHL-LVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETF 59

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
           +  + + W+ +I  +       E + L+  M+   +   DF+F  +L+AC   G+ + G+
Sbjct: 60  QNPDSFMWAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGE 119

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H  +IK G+     V  S+L +Y   G L  A++ F++M  +D V+W+S+IS Y   G
Sbjct: 120 EVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNG 179

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME-----MVKRMESLGITPD 292
           E+ E   +F  +  ++++L  VT   +  +  +LG   +A       + +R+E+ G   D
Sbjct: 180 ESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLND 239

Query: 293 --------------------------VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
                                     + +WT MIS + ++    QAL +F EM    V P
Sbjct: 240 ALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAP 299

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           N VTI + +S+C     L  G  +H  AVK    DD  +G +LI  Y++  +L   E+V 
Sbjct: 300 NAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVL 359

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV--------------ITW 432
             I  +++ SWN +I+ Y   G   +A  +F++MQ     P+               + W
Sbjct: 360 HTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLW 419

Query: 433 --------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                               N LI  Y + G+ D A  +F R+       ++  +WNS+I
Sbjct: 420 LGHQIHGYAIKRHILDEFVQNSLIDMYSKCGHVDLAYLIFDRIQS-----KSVVAWNSMI 474

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
            G+ Q+G    A+ +F +M  +C   N VT L+ + AC+++    K K +H  ++   ++
Sbjct: 475 CGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVK 534

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
             L +  +LID YAK G++  +  +FD MS + +++W+++I G  +HG   AA+ LF +M
Sbjct: 535 KDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEM 594

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
               +KPN  TF++I+ A S +G V+ GK  F S+   +++ P +EH++ M+DL  R+G 
Sbjct: 595 IQREMKPNDITFMNILSACSHSGYVEEGKFYFNSMKN-FEVEPNLEHFACMVDLLSRAGD 653

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER-LFDLEPGDVLIQRLILQ 711
           L+EA   I  MP   ++SIW ALL  CRIH  +D+ +  IER L D+   D     L+  
Sbjct: 654 LDEAYRIINSMPFPAEASIWGALLNGCRIHQRMDM-IRNIERDLLDMRTDDTGYYTLLSN 712

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN 771
           IYA  G  + + KVR   +    +   G   IE+   VY F  G  S      + ++L+N
Sbjct: 713 IYAEEGNWDVSRKVRSAMKGIGLKKVPGYSTIELDKKVYRFGAGDVSHWQVKEINTFLEN 772

Query: 772 VPENVTARSSHSGLCIEEEEKEE 794
                + ++ +     + E K E
Sbjct: 773 FQSLASEQACNVSCWTDNEIKAE 795



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 136/562 (24%), Positives = 255/562 (45%), Gaps = 44/562 (7%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG  +E + +   + +Q  ++   T +++  AC +   + LA+ +H   +    E    +
Sbjct: 178 NGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPL 237

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y++C     A  +F +M  R++ +W+AMI  Y+R + +++ +++F  M++  +
Sbjct: 238 NDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKV 297

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+      +L +C        GK +H   +K        +  +++  Y + GKL +  +
Sbjct: 298 APNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEK 357

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE--------------------- 252
              ++ +++ ++WN +IS Y   G   EA  +F +M R+                     
Sbjct: 358 VLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGL 417

Query: 253 ----------EIKLGVV---TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                      IK  ++     N LI  Y++ G  D+A  +  R++S      V  W  M
Sbjct: 418 LWLGHQIHGYAIKRHILDEFVQNSLIDMYSKCGHVDLAYLIFDRIQS----KSVVAWNSM 473

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I GF+Q G + +A+ LF +M    +  N VT  +AI AC+ +  L  G  +H   +  G 
Sbjct: 474 ICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGV 533

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             D+ +  +LI+MY+KC +L  A RVFD + ++ V SW++MI G    G    A  LF +
Sbjct: 534 KKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAE 593

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M + ++ PN IT+  ++S    +G  +E    F  M KN +V+ N   +  ++    + G
Sbjct: 594 MIQREMKPNDITFMNILSACSHSGYVEEGKFYFNSM-KNFEVEPNLEHFACMVDLLSRAG 652

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
             + A   +R + S  F        ++L  C      + ++ I   +L    + +     
Sbjct: 653 DLDEA---YRIINSMPFPAEASIWGALLNGCRIHQRMDMIRNIERDLLDMRTDDT-GYYT 708

Query: 540 SLIDTYAKSGNIVYSRTIFDGM 561
            L + YA+ GN   SR +   M
Sbjct: 709 LLSNIYAEEGNWDVSRKVRSAM 730



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/357 (25%), Positives = 171/357 (47%), Gaps = 6/357 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
            G   EA+ +   +  QG      +  + + AC +   + L  ++H +      +D FV+
Sbjct: 380 QGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQIHGYAIKRHILDEFVQ 439

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+ +Y+KCG +D A  +F+ ++ +++  W++MI  +S+     E + LF  M  + L 
Sbjct: 440 NSLIDMYSKCGHVDLAYLIFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLD 499

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            ++  F   +QAC + G  E GK +H  +I  G+     +  +++ +Y KCG L  A R 
Sbjct: 500 MNEVTFLTAIQACSHMGHLEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRV 559

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F+SM E+  V+W++MI G    G+ D A  LF +M + E+K   +TF  ++ + +  G  
Sbjct: 560 FDSMSERSVVSWSAMIGGCGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYV 619

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
           +        M++  + P++  + CM+   ++ G   +A  +   M F    P   +I  A
Sbjct: 620 EEGKFYFNSMKNFEVEPNLEHFACMVDLLSRAGDLDEAYRIINSMPF----PAEASIWGA 675

Query: 335 -ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
            ++ C   + + M   I    + M  TDD      L N+Y++    + + +V   +K
Sbjct: 676 LLNGCRIHQRMDMIRNIERDLLDMR-TDDTGYYTLLSNIYAEEGNWDVSRKVRSAMK 731


>gi|302782465|ref|XP_002973006.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
 gi|300159607|gb|EFJ26227.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
          Length = 698

 Score =  331 bits (848), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 226/781 (28%), Positives = 383/781 (49%), Gaps = 95/781 (12%)

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG--LFPDD 157
           +Y  CG L+DAR VF+ M  RN ++W+ +I AY    + +E + L+  +V+    +  D 
Sbjct: 1   MYRDCGRLEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADA 60

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
           F+F  +L AC      E G  +H  ++K G+     ++N+++ +Y KCG++         
Sbjct: 61  FIFSSVLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRI--------- 111

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
                                 D A ++FD++   +    VV++N ++ +  + G  +VA
Sbjct: 112 ----------------------DRAKQVFDRITHRD----VVSWNAMVSANAEAGHLEVA 145

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
           +++ + M    ++ DV  W+ MIS  A  G   +AL+L++EM  + V PN  T+ + ++A
Sbjct: 146 LKIYQEM----VSADVLCWSTMISAEAMAGHDREALELYREM-ILSVRPNASTLATVLAA 200

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV-FDMIKDKDVYS 396
           CT L  L+ G  +   A++ G   D +VG +L+N+Y++  ++ AA  V FD +KD+    
Sbjct: 201 CTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFGDVIAAREVLFDSMKDR---- 256

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMG 456
                                           V++WN +++ + QN   DEA  LF+ M 
Sbjct: 257 -------------------------------TVVSWNAMVTAFAQNARVDEAEKLFREMP 285

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
                 ++  SWN++IAG+ Q G+   AL +FR+M      P+ +T  SVL ACA L AS
Sbjct: 286 D-----KSVISWNAMIAGFGQNGRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTAS 340

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
           +  + I    +  +L   + V NS+ + Y K G    +R  F  M+ +D+++W ++I  Y
Sbjct: 341 SLGRFICDG-MDEALAKDISVANSICNMYGKCGLPELARQTFLEMTYRDVVSWTAIIAAY 399

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT--ECYQII 634
             +G+   ALD+F  M   G++PN  T ++ + A S   + D G  +F S+   + Y + 
Sbjct: 400 SQNGYSSEALDIFRIMVQAGVEPNGITLINTLSACSHGALFDEGSDIFSSLVSGDYYGVT 459

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER 694
               H+   IDL GR+G L++A   I  MP +  +  W +LL+ACR   ++  A      
Sbjct: 460 ANESHFLCAIDLLGRAGYLKDAETLITKMPFKAGAVAWTSLLSACRTFRDLKRAGRVANH 519

Query: 695 LFDLEPG---DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
           LF+L+     D     ++  IYA  G     +K+R   R   R+   G+  I +K     
Sbjct: 520 LFELDESSIKDPAPYVMLSNIYASAGDRAAEMKLRDQIRIKCRKKLPGKSTITIKGQTNE 579

Query: 752 FVTGGWSESYSDLLYSWL----QNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAF 807
           F +   +    D  Y+ L    Q + E      +      EEE ++ +S  HSEKLALAF
Sbjct: 580 FYSLDETHPRRDDAYNELRRLFQKMKEAGYVPDTRIAEMEEEETEQSLS-YHSEKLALAF 638

Query: 808 ALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
            ++ ++    ++ IVKN+R+C  CH   K++S   + +I + D+   HHF+NG CSC D 
Sbjct: 639 GVL-NTPPEASLCIVKNLRVCSDCHNVIKFLSKHLNRKIAVRDATRFHHFENGFCSCRDC 697

Query: 868 W 868
           W
Sbjct: 698 W 698



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 230/516 (44%), Gaps = 85/516 (16%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRNTYI--NLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           G G+  EA+ +  ++     +++ + +I  ++L AC     +    ++H   +    + D
Sbjct: 35  GAGKEQEALCLYRTLVRSSTEIQADAFIFSSVLAACARLKCLEQGLEIHERIVKRGVKQD 94

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR------------- 137
           V ++  L+++YAKCG +D A++VF+ +  R++ +W+AM+ A +                 
Sbjct: 95  VGLQNALVTMYAKCGRIDRAKQVFDRITHRDVVSWNAMVSANAEAGHLEVALKIYQEMVS 154

Query: 138 -----W-------------REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
                W             RE +EL+  M+   + P+      +L AC   GD  +G L+
Sbjct: 155 ADVLCWSTMISAEAMAGHDREALELYREMIL-SVRPNASTLATVLAACTRLGDLSSGALV 213

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR-FFESMDEKDGVAWNSMISGYFQIGE 238
               I+ G+     V  +++ +Y + G +I AR   F+SM ++  V+WN+M         
Sbjct: 214 RDGAIQSGLDRDAVVGTTLVNLYARFGDVIAAREVLFDSMKDRTVVSWNAM--------- 264

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD--VFTW 296
                                     + ++ Q  + D A ++ + M      PD  V +W
Sbjct: 265 --------------------------VTAFAQNARVDEAEKLFREM------PDKSVISW 292

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             MI+GF QNGR  QAL+LF+ M   G+ P+ +T  S + AC +L A ++G  I    + 
Sbjct: 293 NAMIAGFGQNGRPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGRFICD-GMD 351

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
                D+ V NS+ NMY KC   E A + F  +  +DV SW ++IA Y Q GY  +A ++
Sbjct: 352 EALAKDISVANSICNMYGKCGLPELARQTFLEMTYRDVVSWTAIIAAYSQNGYSSEALDI 411

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND--KVKRNTASWNSLIAG 474
           F  M ++ V PN IT    +S        DE  D+F  +   D   V  N + +   I  
Sbjct: 412 FRIMVQAGVEPNGITLINTLSACSHGALFDEGSDIFSSLVSGDYYGVTANESHFLCAIDL 471

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             + G   +A  +  KM    F    V   S+L AC
Sbjct: 472 LGRAGYLKDAETLITKMP---FKAGAVAWTSLLSAC 504


>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cucumis sativus]
          Length = 649

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 189/572 (33%), Positives = 321/572 (56%), Gaps = 27/572 (4%)

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           K GK+  AR+ FE M ++D V+W ++I+GY + G  +EA  LFD   R +    VVT+  
Sbjct: 78  KEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLFD---RNDAIKNVVTWTA 134

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+  Y +  + + A  +   M       +V +W  MI G+A+ G   QALDLF+ M    
Sbjct: 135 LVSGYVRWNRIEEARRLFDAMP----VKNVISWNTMIEGYARKGWIDQALDLFEXMP--- 187

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
              N V+  + I+A    + +    E+ +   +     DV+   +++   SK   ++ A 
Sbjct: 188 -ERNVVSWNTVITAFMQRRRVDEAQELFNRMPER----DVISWTTMVAGLSKNGRIDDAR 242

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
            +FD +  ++V SWN+MI GY Q     +A++LF +M E ++     +WN +I+G+IQNG
Sbjct: 243 LLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELS----SWNTMITGFIQNG 298

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC-FYPNCVT 502
             + AVD F +M       +N  +W ++I+G+ Q G+   AL +F +MQ++    PN  T
Sbjct: 299 KLERAVDFFYKMSN-----KNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNEGT 353

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD--G 560
            +SVL AC+ L A  + ++IH  + +   +    V+++LI+ Y+K G +  +R IFD   
Sbjct: 354 FVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDDGS 413

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           +  +D+++WN +I  Y  HG  H A+ LFD+M++ G +P+  T+++++ A S AG+VD G
Sbjct: 414 IGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEG 473

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
            K+F ++     I    +H++ ++DL+GR+G+L+EA +FI+ + ++P +S+W ALL  C 
Sbjct: 474 LKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCN 533

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           +HG+IDL  L  E+L + EP +     ++  IYA  GK  +A  VR   ++   +   G 
Sbjct: 534 VHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDKGLKKQPGC 593

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
            WIEV N V+ FV G  S    + +Y  L ++
Sbjct: 594 SWIEVGNTVHVFVVGDNSHREFENIYLLLHDL 625



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 218/424 (51%), Gaps = 22/424 (5%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           +V   T L+S Y +   +++AR +F+ M  +N+ +W+ MI  Y+R     + ++LF  M 
Sbjct: 128 NVVTWTALVSGYVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWIDQALDLFEXMP 187

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           +  +   + +    +Q        EA +L + +  +  +S       +++A   K G++ 
Sbjct: 188 ERNVVSWNTVITAFMQ---RRRVDEAQELFNRMPERDVISWT-----TMVAGLSKNGRID 239

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            AR  F+ M  ++ V+WN+MI GY Q    DEA +LF++M   E+     ++N +I  + 
Sbjct: 240 DARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELS----SWNTMITGFI 295

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV-GVMPNG 328
           Q G+ + A++   +M +     +V TWT +ISG  Q+GR+ +AL +F EM     V PN 
Sbjct: 296 QNGKLERAVDFFYKMSN----KNVVTWTAVISGHVQDGRSEEALKIFSEMQAANNVKPNE 351

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD- 387
            T  S + AC+ L AL  G +IH +  K  + +   V ++LINMYSKC ELE A ++FD 
Sbjct: 352 GTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELARKIFDD 411

Query: 388 -MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
             I  +DV SWN MIA Y   G+  KA  LF +MQ     P+ +T+  L+S     G  D
Sbjct: 412 GSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVD 471

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           E + LF+ + ++  +K     +  L+  + + G+   A    + ++     P+     ++
Sbjct: 472 EGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVK---PSASVWAAL 528

Query: 507 LPAC 510
           L  C
Sbjct: 529 LAGC 532



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 191/430 (44%), Gaps = 50/430 (11%)

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
           +T+  L  F   +F+    +   ++S  S C  +       +I S         +V   N
Sbjct: 17  KTTTLLSSFGRYAFLLCNLHNSILSSQFSTCQVVP------KISSPVRDFSANSNVARSN 70

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
            LI    K  ++  A +VF+ + D+DV SW ++I GY + G   +A  LF     +D   
Sbjct: 71  WLITQLGKEGKIGEARQVFEEMPDRDVVSWTAVITGYIKCGMIEEAKTLF---DRNDAIK 127

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           NV+TW  L+SGY++    +EA  LF  M       +N  SWN++I GY + G  + AL +
Sbjct: 128 NVVTWTALVSGYVRWNRIEEARRLFDAMP-----VKNVISWNTMIEGYARKGWIDQALDL 182

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           F  M       N V+  +V+ A       ++ +E+      R  E  +    +++   +K
Sbjct: 183 FEXMPER----NVVSWNTVITAFMQRRRVDEAQEL----FNRMPERDVISWTTMVAGLSK 234

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
           +G I  +R +FD M  +++++WN++I GY  +     A  LF+QM    L          
Sbjct: 235 NGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLFEQMPERELSSWNTMITGF 294

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP--- 664
           I    L   VD     F  ++    +      ++A+I  + + G+ EEA++   +M    
Sbjct: 295 IQNGKLERAVDF----FYKMSNKNVVT-----WTAVISGHVQDGRSEEALKIFSEMQAAN 345

Query: 665 -IEPDSSIWEALLTACRIHGNIDLAVLA--------IERLFDLEPGDVLIQRLILQIYAI 715
            ++P+   + ++L AC       LA L         I +    E  DV+    ++ +Y+ 
Sbjct: 346 NVKPNEGTFVSVLGACS-----KLAALCEGQQIHQIISKTVYQEVADVV--SALINMYSK 398

Query: 716 CGKPEDALKV 725
           CG+ E A K+
Sbjct: 399 CGELELARKI 408



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 103/437 (23%), Positives = 182/437 (41%), Gaps = 85/437 (19%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T ++     G +++A+ + + +  +   V  NT I    A +    +  A++L    N 
Sbjct: 164 NTMIEGYARKGWIDQALDLFEXMPERNV-VSWNTVIT---AFMQRRRVDEAQEL---FNR 216

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           + E DV   T +++  +K G +DDAR +F+ M  RN+ +W+ MI  Y+++ R  E  +LF
Sbjct: 217 MPERDVISWTTMVAGLSKNGRIDDARLLFDKMPVRNVVSWNTMIIGYAQNMRLDEAFKLF 276

Query: 146 FLM----------------------------------------------VQDGLFPDDFL 159
             M                                              VQDG   +   
Sbjct: 277 EQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALK 336

Query: 160 FPKILQACGN--------------CGDFEA---GKLMHSLVIKLGMSCVRRVRNSVLAVY 202
               +QA  N              C    A   G+ +H ++ K     V  V ++++ +Y
Sbjct: 337 IFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMY 396

Query: 203 VKCGKLIWARRFFE--SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
            KCG+L  AR+ F+  S+  +D V+WN MI+ Y   G   +A  LFD+M     +   VT
Sbjct: 397 SKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVT 456

Query: 261 FNILIRSYNQLGQCDVAMEMVK---RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           +  L+ + +  G  D  +++ +   R  S+ +  D F  TC++  F + GR  +A D  K
Sbjct: 457 YIALLSACSHAGLVDEGLKLFENLVRDRSIKLREDHF--TCLVDLFGRAGRLQEAFDFIK 514

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSK 375
            +    V P+     + ++ C     + +G      A K+  T+    G  L+  N+Y+ 
Sbjct: 515 GLE---VKPSASVWAALLAGCNVHGHIDLG---KLTAEKLLETEPENAGTYLVLSNIYAS 568

Query: 376 CEELEAAERVFDMIKDK 392
             +   A  V   +KDK
Sbjct: 569 TGKWREAAGVRMKMKDK 585


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 225/740 (30%), Positives = 366/740 (49%), Gaps = 81/740 (10%)

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG------ 257
           KCG    A + F+ M + + V +NS+ISGY Q+   D+   LFDK  R  +KL       
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 258 -----------------------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
                                        VV  N LI  Y++ GQ D A  +    + L 
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKL- 131

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT-DLKALAM- 346
              D  +W  +I+G+ QNG+  + L + ++M   G+  N  T+ SA+ AC+ +     M 
Sbjct: 132 ---DGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMF 188

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G  +H  A+K+G   DV+VG +L++MY+K   L+ A ++FD + DK+V  +N+M+AG  Q
Sbjct: 189 GTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQ 248

Query: 407 A----GYCG-KAYELFIKMQESDVPPNVITWNVLISGYI----------------QNGN- 444
                  C  KA  LF +M+   + P++ T++ L+   I                +NG  
Sbjct: 249 QETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLL 308

Query: 445 EDE-----AVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            DE      +DL+  +G         N           ++I GY Q G+  +AL +F ++
Sbjct: 309 SDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYEL 368

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
            +    P+     +++ +CA +      ++I G   +  +       NS I  YAKSG++
Sbjct: 369 LTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDL 428

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             +   F  M + DI++W+++IC    HG    AL  F+ MKS G++PN   FL +++A 
Sbjct: 429 YAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIAC 488

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
           S  G+V+ G + F ++ + Y++   ++H   ++DL GR+G+L +A   I  +  E +  +
Sbjct: 489 SHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVM 548

Query: 672 WEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
           W ALL+ACRIH +   A    +++ +LEP       L+  IY   G    A KVR L  E
Sbjct: 549 WRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEE 608

Query: 732 NTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEE 791
              +   G  WI++ + VY+FV+G  S   S  +Y+ L  +        S   +   + E
Sbjct: 609 RRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKDILGYKIE 668

Query: 792 KEEISGI--HSEKLALAFALIG-SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFL 848
            E ++ +  HSEKLA+AF ++  S  AP  +R++KN+R+C+ CH T K  S++   E+ +
Sbjct: 669 HEHLTNVNYHSEKLAVAFGVLYLSESAP--VRVMKNLRICLDCHMTMKLFSIVEKRELIV 726

Query: 849 ADSKCLHHFKNGQCSCGDYW 868
            DS   HHFK+G CSCGDYW
Sbjct: 727 RDSVRFHHFKDGSCSCGDYW 746



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 213/487 (43%), Gaps = 86/487 (17%)

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
           KCG    A ++F+ M + N+ T++++I  Y +     +V+ LF    + GL  D +    
Sbjct: 13  KCGDTRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCAG 72

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
            L AC   G+  AGK++H L++  G+     + NS++ +Y KCG++ +AR  F+  D+ D
Sbjct: 73  ALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLD 132

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKM-------------------------CR------ 251
           GV+WNS+I+GY Q G+ +E   +  KM                         C+      
Sbjct: 133 GVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTML 192

Query: 252 --EEIKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ 305
               IKLG    VV    L+  Y + G  D A+++  +M    +  +V  +  M++G  Q
Sbjct: 193 HDHAIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQM----VDKNVVMYNAMMAGLLQ 248

Query: 306 NGRTS-----QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
                     +AL+LF EM   G+ P+  T +S + AC  ++      ++H+L  K G  
Sbjct: 249 QETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLL 308

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            D  +G+ LI++YS    +  A   F+ I +  +    +MI GY Q G    A  LF ++
Sbjct: 309 SDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYEL 368

Query: 421 QESDVPPNVITWNVLISG-----------------------------------YIQNGNE 445
              +  P+   ++ ++S                                    Y ++G+ 
Sbjct: 369 LTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDL 428

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
             A   FQ+M   D V     SW+++I    Q G    AL  F  M+S    PN    L 
Sbjct: 429 YAANLTFQQMENPDIV-----SWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLG 483

Query: 506 VLPACAY 512
           VL AC++
Sbjct: 484 VLIACSH 490



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 122/471 (25%), Positives = 215/471 (45%), Gaps = 53/471 (11%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKT 95
           L++ + + D     G K+ +      L AC  S ++   + +H  + LV  +   V +  
Sbjct: 48  LDKVMILFDKARRLGLKLDKYNCAGALTACSQSGNLSAGKMIHGLI-LVYGLGSQVVLTN 106

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            L+ +Y+KCG +D AR +F+   + +  +W+++I  Y ++ ++ E++ +   M Q+GL  
Sbjct: 107 SLIDMYSKCGQVDYARILFDHSDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAF 166

Query: 156 DDFLFPKILQACGN----CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           + +     L+AC +    C  F  G ++H   IKLG+     V  ++L +Y K G L  A
Sbjct: 167 NTYTLGSALKACSSNFNGCKMF--GTMLHDHAIKLGLHLDVVVGTALLDMYAKTGSLDDA 224

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDE-----AHRLFDKMCREEIKLGVVTF----- 261
            + F+ M +K+ V +N+M++G  Q    ++     A  LF +M    IK  + T+     
Sbjct: 225 IQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLK 284

Query: 262 ------------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITP 291
                                         +ILI  Y+ LG    A+     + +L I P
Sbjct: 285 ACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVP 344

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
                T MI G+ QNG    AL LF E+      P+    ++ +S+C ++  L  G +I 
Sbjct: 345 ----MTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQ 400

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
             A K+G +   +  NS I MY+K  +L AA   F  +++ D+ SW++MI    Q G+  
Sbjct: 401 GHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAM 460

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
           +A   F  M+   + PN   +  ++      G  +E +  F  M K+ K+K
Sbjct: 461 EALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLRYFDTMEKDYKMK 511



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 154/346 (44%), Gaps = 43/346 (12%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-----LVTEI 89
           NG+  E +T+L  +   G      T  + L+AC  S++ +  +     L+     L   +
Sbjct: 146 NGKYEELLTILQKMHQNGLAFNTYTLGSALKAC--SSNFNGCKMFGTMLHDHAIKLGLHL 203

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR-----DQRWREVVEL 144
           DV V T LL +YAK G LDDA ++F+ M ++N+  ++AM+    +     D+   + + L
Sbjct: 204 DVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNL 263

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           FF M   G+ P  F +  +L+AC    DF+  K +H+L+ K G+     + + ++ +Y  
Sbjct: 264 FFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLYSV 323

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
            G ++ A   F S+     V   +MI GY Q GE + A  LF ++   E K     F+ +
Sbjct: 324 LGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTI 383

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGIT-------------------------------PDV 293
           + S   +G      ++      +GI+                               PD+
Sbjct: 384 MSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENPDI 443

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
            +W+ MI   AQ+G   +AL  F+ M   G+ PN       + AC+
Sbjct: 444 VSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACS 489



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 133/286 (46%), Gaps = 6/286 (2%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTK 96
           +A+ +   + + G K    TY +LL+ACI       A+++HA +    L++  D ++ + 
Sbjct: 259 KALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLS--DEYIGSI 316

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+ +Y+  G + DA   F  +    +   +AMI  Y ++  +   + LF+ ++     PD
Sbjct: 317 LIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPD 376

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           +F+F  I+ +C N G   +G+ +     K+G+S     +NS + +Y K G L  A   F+
Sbjct: 377 EFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQ 436

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            M+  D V+W++MI    Q G   EA R F+ M    I+     F  ++ + +  G  + 
Sbjct: 437 QMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEE 496

Query: 277 AMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
            +     ME    +   V    C++    + GR + A  L   + F
Sbjct: 497 GLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGF 542


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 210/673 (31%), Positives = 333/673 (49%), Gaps = 81/673 (12%)

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
           L V+TF  L+  Y++ G  + A ++   +       +V  WT +++G+ QN     AL L
Sbjct: 93  LFVMTF--LVNVYSKCGVMESAHKVFDNLPR----RNVNAWTTLLTGYVQNSHPLLALQL 146

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           F +M   G  P+  T+   ++AC+ L+++  G ++H+  +K     D  +GNSL + YSK
Sbjct: 147 FIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSK 206

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
              LE A + F +IK+KDV SW S+I+  C  G   ++   F+ M    + PN  T   +
Sbjct: 207 FRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSV 266

Query: 436 ISG-----------------------------------YIQNGNEDEAVDLFQRMGKNDK 460
           +S                                    Y++ G   EA  LF+ M     
Sbjct: 267 LSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMET--- 323

Query: 461 VKRNTASWNSLIAGYQQL-----------GQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
              N  +WN++IAG+ ++              + AL +F+K+  S   P+  T  SVL  
Sbjct: 324 --LNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSV 381

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           C+ LVA  + ++IHG +++  + + + V  +L+  Y K G+I  +   F  M S+ +I+W
Sbjct: 382 CSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISW 441

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
            S+I G+  HG    AL LF+ M+  G+KPN+ TF+ ++ A S AG+ D     F  + +
Sbjct: 442 TSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQK 501

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            Y I P+++H++ +ID+Y R G++EEA + +  M  EP+ +IW  L+  CR HG  DL  
Sbjct: 502 QYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGF 561

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLV 749
            A E+L  L+P DV     +L ++   G+ +D  KVRKL +E          WI +K  V
Sbjct: 562 YAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKV 621

Query: 750 YTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEI-------------- 795
           Y+F     S   S  +Y  L+ V   V A        +  E  E++              
Sbjct: 622 YSFKPNDKSHCQSLEMYKLLETVLNEVKA--------LGYEPIEDVEVIEKEENEERVLS 673

Query: 796 -SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCL 854
            + +HSEKLA+AF L+    A   IR+VK+I MC  CH   +++S++   EI + DSK L
Sbjct: 674 STVLHSEKLAIAFGLLNLPTAT-PIRVVKSITMCRDCHNFIRFISLLKGREIVIRDSKQL 732

Query: 855 HHFKNGQCSCGDY 867
           H F NG CSCG Y
Sbjct: 733 HKFLNGYCSCGGY 745



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 248/505 (49%), Gaps = 55/505 (10%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDA 110
           G ++  + Y  LLQ CID N    AR +H   +      D+FV T L++VY+KCG ++ A
Sbjct: 53  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112

Query: 111 REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
            +VF+++  RN+  W+ ++  Y ++      ++LF  M++ G +P ++    +L AC + 
Sbjct: 113 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
              E GK +H+ +IK  +     + NS+ + Y K  +L +A + F+ + EKD ++W S+I
Sbjct: 173 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 232

Query: 231 SGYFQIGENDEAHRLFDKMCRE-------------------------------EIKLG-- 257
           S     G+   +   F  M  +                                IKLG  
Sbjct: 233 SSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYG 292

Query: 258 --VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ---------- 305
             ++  N ++  Y + G    A ++ + ME+L    ++ TW  MI+G A+          
Sbjct: 293 SSILIKNSIMYLYLKCGWLIEAQKLFEGMETL----NLVTWNAMIAGHAKMMDLAEDDVA 348

Query: 306 -NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
            +   S AL +F+++   G+ P+  T +S +S C++L AL  G +IH   +K G   DV+
Sbjct: 349 AHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVV 408

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
           VG +L++MY+KC  ++ A + F  +  + + SW SMI G+ + G   +A +LF  M+   
Sbjct: 409 VGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVG 468

Query: 425 VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
           + PN +T+  ++S     G  DEA+  F+ M K   +K     +  LI  Y +LG+   A
Sbjct: 469 IKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEA 528

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPA 509
             V  KM    F PN  TI S+L A
Sbjct: 529 FDVVHKMN---FEPN-ETIWSMLIA 549



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 228/484 (47%), Gaps = 62/484 (12%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLS 99
           A+ +   +   GA     T   +L AC    SI   +++HA+L     + D  +   L S
Sbjct: 143 ALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSS 202

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
            Y+K   L+ A + F+ ++E+++ +W+++I +   + +    +  F  M+ DG+ P+++ 
Sbjct: 203 FYSKFRRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYT 262

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
              +L AC      + G  +HSL IKLG      ++NS++ +Y+KCG LI A++ FE M+
Sbjct: 263 LTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGME 322

Query: 220 EKDGVAWNSMISGY---FQIGEND-EAHR-------LFDKMCREEIKLGVVTFN------ 262
             + V WN+MI+G+     + E+D  AH+       +F K+ R  +K  + TF+      
Sbjct: 323 TLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVC 382

Query: 263 -----------------------------ILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
                                         L+  YN+ G  D A +    M S      +
Sbjct: 383 SNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKCGSIDKASKAFLEMPS----RTM 438

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            +WT MI+GFA++G + QAL LF++M  VG+ PN VT    +SAC+        +    L
Sbjct: 439 ISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSHAGLADEALYYFEL 498

Query: 354 AVKMGFTDDVLVGNS-LINMYSKCEELEAA-ERVFDMIKDKDVYSWNSMIAG---YCQAG 408
             K      V+   + LI+MY +   +E A + V  M  + +   W+ +IAG   + ++ 
Sbjct: 499 MQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSD 558

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV-KRNTAS 467
               A E  +K++    P +V T+  L++ +I  G   + V   +++ K +KV K    S
Sbjct: 559 LGFYAAEQLLKLK----PKDVETYVSLLNMHISAGRWKD-VSKVRKLMKEEKVGKLKDWS 613

Query: 468 WNSL 471
           W S+
Sbjct: 614 WISI 617



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 191/404 (47%), Gaps = 34/404 (8%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDV 91
           C NG+   +++    + + G K    T  ++L AC    ++ L  ++H+  + L     +
Sbjct: 236 CDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSI 295

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWRE----------- 140
            +K  ++ +Y KCG L +A+++FE M   NL TW+AMI  +++     E           
Sbjct: 296 LIKNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGST 355

Query: 141 VVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
            + +F  + + G+ PD F F  +L  C N    E G+ +H  +IK G+     V  ++++
Sbjct: 356 ALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVS 415

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y KCG +  A + F  M  +  ++W SMI+G+ + G + +A +LF+ M    IK   VT
Sbjct: 416 MYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVT 475

Query: 261 FNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           F  ++ + +  G  D A+   + M+    I P +  + C+I  + + GR  +A D+  +M
Sbjct: 476 FVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKM 535

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY------ 373
           +F    PN    +  I+ C       +G       +K+    DV    SL+NM+      
Sbjct: 536 NF---EPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLK-PKDVETYVSLLNMHISAGRW 591

Query: 374 ---SKCEELEAAERVFDM-------IKDKDVYSWNSMIAGYCQA 407
              SK  +L   E+V  +       IK+K VYS+      +CQ+
Sbjct: 592 KDVSKVRKLMKEEKVGKLKDWSWISIKEK-VYSFKPNDKSHCQS 634



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 93/190 (48%), Gaps = 9/190 (4%)

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           +++SS ++P       +L  C     + + + IHG +++      L VM  L++ Y+K G
Sbjct: 55  RIESSYYFP-------LLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCG 107

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
            +  +  +FD +  +++  W +L+ GYV +     AL LF +M   G  P+  T   ++ 
Sbjct: 108 VMESAHKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLN 167

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDS 669
           A S    ++ GK+V   + + Y I       +++   Y +  +LE A++  + +  E D 
Sbjct: 168 ACSSLQSIEFGKQVHAYLIK-YHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIK-EKDV 225

Query: 670 SIWEALLTAC 679
             W +++++C
Sbjct: 226 ISWTSVISSC 235


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 210/616 (34%), Positives = 328/616 (53%), Gaps = 59/616 (9%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           DV +    I+ F +      A ++F++MS    +   VT  + +S  T  K      E H
Sbjct: 72  DVVSLNKTIASFVRACDLESARNVFEKMS----VRTTVTWNTMLSGYT--KVAGKVKEAH 125

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
            L  K+   D V   N ++  Y +   ++AA   F+ +  KD+ SWN++I+G+ Q G   
Sbjct: 126 ELFDKIPEPDSVSY-NIMLVCYLRSYGVKAALAFFNKMPVKDIASWNTLISGFAQNGQMQ 184

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMG--------------- 456
           KA++LF  M E     N ++W+ +ISGY+++G+ + A +L++ +G               
Sbjct: 185 KAFDLFSVMPEK----NGVSWSAMISGYVEHGDLEAAEELYKNVGMKSVVVETAMLTGYM 240

Query: 457 KNDKVK-----------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           K  KV+           +N  +WNS+IAGY +  +  + L VF+ M  S   PN +++ S
Sbjct: 241 KFGKVELAERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSS 300

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           VL  C+ L A    +++H  V +  L        SLI  Y K G++  +  +F  M  KD
Sbjct: 301 VLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKD 360

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
           +ITWN++I GY  HG    AL LFD+M++  +KP+  TF+++ILA + AG VDLG + F 
Sbjct: 361 VITWNAMISGYAQHGAGRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFK 420

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
           S+ + + I     HY+ +IDL GR+G+L+EA+  I++MP  P ++I+  LL ACRIH N+
Sbjct: 421 SMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNL 480

Query: 686 DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV 745
           DLA  A   L +L+P        +  IYA   K +   KVRK+ +E+      G  WIE+
Sbjct: 481 DLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEI 540

Query: 746 KNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------------IEEEEKE 793
           K++ + F +       SD L+  L ++ + +        L             +EEE KE
Sbjct: 541 KSVTHEFRS-------SDRLHPELTSIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKE 593

Query: 794 EISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
           ++   HSEKLA+AF L+ +  AP T IR+ KN+R+C  CH   K++S +   EI + D+ 
Sbjct: 594 KLLLWHSEKLAIAFGLMKT--APGTPIRVFKNLRVCGDCHRAIKFISAIEKREIIVRDTT 651

Query: 853 CLHHFKNGQCSCGDYW 868
             HHF+NG CSCGDYW
Sbjct: 652 RFHHFRNGFCSCGDYW 667



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 222/453 (49%), Gaps = 42/453 (9%)

Query: 74  HLARKLHAF--------LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTW 125
           H  R++H          L++ T  DV    K ++ + +   L+ AR VFE M  R   TW
Sbjct: 48  HPPRRIHLVSPNNVTPNLHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTVTW 107

Query: 126 SAMIGAYSR-DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           + M+  Y++   + +E  ELF     D +   D +   I+  C           + S  +
Sbjct: 108 NTMLSGYTKVAGKVKEAHELF-----DKIPEPDSVSYNIMLVC----------YLRSYGV 152

Query: 185 KLGMSCVRRVR-------NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
           K  ++   ++        N++++ + + G++  A   F  M EK+GV+W++MISGY + G
Sbjct: 153 KAALAFFNKMPVKDIASWNTLISGFAQNGQMQKAFDLFSVMPEKNGVSWSAMISGYVEHG 212

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
           + + A  L+  +  +     VV    ++  Y + G+ ++A  + +RM       ++ TW 
Sbjct: 213 DLEAAEELYKNVGMK----SVVVETAMLTGYMKFGKVELAERIFQRMA----VKNLVTWN 264

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            MI+G+ +N R    L +FK M    V PN ++++S +  C++L AL +G ++H L  K 
Sbjct: 265 SMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKS 324

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
             + D     SLI+MY KC +L++A ++F  +  KDV +WN+MI+GY Q G   KA  LF
Sbjct: 325 PLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLF 384

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
            KM+   + P+ IT+  +I      G  D  V  F+ M K   ++     +  +I    +
Sbjct: 385 DKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGR 444

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            G+ + A+ + ++M    F P+     ++L AC
Sbjct: 445 AGRLDEAVSLIKEMP---FTPHAAIYGTLLGAC 474



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/220 (21%), Positives = 107/220 (48%), Gaps = 20/220 (9%)

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
           P   +LV+ N V       L     S +  +N  I ++ ++ ++  +R +F+ MS +  +
Sbjct: 50  PRRIHLVSPNNVTP----NLHVDTASDVVSLNKTIASFVRACDLESARNVFEKMSVRTTV 105

Query: 568 TWNSLICGYV-LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
           TWN+++ GY  + G    A +LFD++     +P+  ++  +++ +  +  V      F  
Sbjct: 106 TWNTMLSGYTKVAGKVKEAHELFDKIP----EPDSVSYNIMLVCYLRSYGVKAALAFFNK 161

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
           +      +  I  ++ +I  + ++G++++A +    MP E +   W A+++    HG+++
Sbjct: 162 MP-----VKDIASWNTLISGFAQNGQMQKAFDLFSVMP-EKNGVSWSAMISGYVEHGDLE 215

Query: 687 LAVLAIERLF-DLEPGDVLIQRLILQIYAICGKPEDALKV 725
               A E L+ ++    V+++  +L  Y   GK E A ++
Sbjct: 216 ----AAEELYKNVGMKSVVVETAMLTGYMKFGKVELAERI 251


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 217/669 (32%), Positives = 338/669 (50%), Gaps = 70/669 (10%)

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+  DD  FP +L+AC +    + G+ +H +V KLG      V N++L  Y  CG L   
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE------------------ 253
           +R F+ M E+D V+WNS+I  +   G   EA  LF +M                      
Sbjct: 62  KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121

Query: 254 --------------IKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                         +K G    V   N L+  Y   G+C    +  +  + +     V +
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVY---GKCGYVKDSRRVFDEISERNGV-S 177

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  +I+  A   R   AL++F+ M   GV PN VT +S +    +LK    G EIH  ++
Sbjct: 178 WNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSL 237

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           + G   D+ V N+LI+MY+K      A  VF+ I +K++ SWN+M+A + Q      A +
Sbjct: 238 RFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVD 297

Query: 416 LFIKMQESDVPPNVITW-NVLIS----GYIQNGNEDEA--------VDLFQRMGKNDKVK 462
           L  +MQ     PN +T+ NVL +    G+++ G E  A        VDLF      D   
Sbjct: 298 LVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYA 357

Query: 463 ----------------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
                           R+  S+N LI GY Q    + +L +F +M       + V+ + V
Sbjct: 358 KCGCLNLARRVFKISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGV 417

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
           + ACA L A  + KE+HG  +R+ L + L + N+L+D Y K G I  +  +F  + S+D 
Sbjct: 418 ISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDT 477

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
            +WNS+I GY + G    A++LF+ MK  G++ +  ++++++ A S  G+V+ GKK F  
Sbjct: 478 ASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEH 537

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
           + +   I P   HY+ M+DL GR+G +EEA++ IE +PIEPD+++W ALL ACRIHG I+
Sbjct: 538 M-QVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIE 596

Query: 687 LAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
           LA  A E LF L+P       ++  +YA  GK ++A +VRKL +    + + G  W+++ 
Sbjct: 597 LAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQID 656

Query: 747 NLVYTFVTG 755
           N V+ FV G
Sbjct: 657 NQVHAFVAG 665



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 169/626 (26%), Positives = 297/626 (47%), Gaps = 77/626 (12%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDA 110
           G ++  +T+  +L+AC DS S+   R++H  +  L  + DVFV   LL  Y  CG L D 
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 111 REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM-VQDGLFPDDFLFPKILQACGN 169
           + VF++M ER++ +W+++IG +S    + E + LF  M ++ G  P+      +L  C  
Sbjct: 62  KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
             D   G+ +H  V+K G+     V N+++ VY KCG +  +RR F+ + E++GV+WN++
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAI 181

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           I+    +  N +A  +F  M    +K   VTF+ ++    +L   D   E+       G+
Sbjct: 182 ITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGL 241

Query: 290 TPDVF-------------------------------TWTCMISGFAQNGRTSQALDLFKE 318
             D+F                               +W  M++ FAQN     A+DL ++
Sbjct: 242 ESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQ 301

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   G +PN VT T+ + AC  +  L  G EIH+ A++ G + D+ V N+L +MY+KC  
Sbjct: 302 MQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGC 361

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------ 432
           L  A RVF  I  +D  S+N +I GY Q   C ++  LF++M    +  +V+++      
Sbjct: 362 LNLARRVFK-ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISA 420

Query: 433 -----------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
                                        N L+  YI+ G  D A  +F+++       R
Sbjct: 421 CANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIP-----SR 475

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           +TASWNS+I GY  LG+   A+ +F  M+      + V+ ++VL AC++     + K+  
Sbjct: 476 DTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYF 535

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFW 582
             +  ++++ +      ++D   ++G I  +  + + +    D   W +L+    +HG+ 
Sbjct: 536 EHMQVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYI 595

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSII 608
             A    + +  F LKP    + S++
Sbjct: 596 ELAHWAAEHL--FKLKPQHSGYYSVL 619



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 187/366 (51%), Gaps = 32/366 (8%)

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
           +GV  +  T    + AC D  ++  G EIH +  K+GF  DV VGN+L+  Y  C  L+ 
Sbjct: 1   MGVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKD 60

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ-ESDVPPNVITW-NVL---- 435
            +RVFD + ++DV SWNS+I  +   G+  +A  LF +M   S   PN+++  +VL    
Sbjct: 61  VKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120

Query: 436 -----ISG------YIQNGNEDEA------VDLFQRMGK--------NDKVKRNTASWNS 470
                ++G       ++ G + +       VD++ + G         ++  +RN  SWN+
Sbjct: 121 GLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNA 180

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +I     L +  +AL +FR M      PN VT  S+LP    L   +  KEIHG  LR  
Sbjct: 181 IITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFG 240

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           LES + V N+LID YAKSG  + +  +F+ +  K+I++WN+++  +  +    AA+DL  
Sbjct: 241 LESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVR 300

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           QM++ G  PN  TF +++ A +  G +  GK++          + +    +A+ D+Y + 
Sbjct: 301 QMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVS-NALTDMYAKC 359

Query: 651 GKLEEA 656
           G L  A
Sbjct: 360 GCLNLA 365



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 168/355 (47%), Gaps = 10/355 (2%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLS 99
           A+ ++  +   G      T+ N+L AC     +   +++HA  +   + +D+FV   L  
Sbjct: 295 AVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTD 354

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +YAKCGCL+ AR VF+ +  R+  +++ +I  YS+     E + LF  M   G+  D   
Sbjct: 355 MYAKCGCLNLARRVFK-ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVS 413

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           +  ++ AC N    + GK +H L ++  +     + N++L  Y+KCG++  A + F  + 
Sbjct: 414 YMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIP 473

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
            +D  +WNSMI GY  +GE   A  LF+ M  + ++   V++  ++ + +  G  +   +
Sbjct: 474 SRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKK 533

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
             + M+   I P    + CM+    + G   +A+ L + +    + P+     + + AC 
Sbjct: 534 YFEHMQVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLP---IEPDANVWGALLGACR 590

Query: 340 --DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
                 LA     H   +K   +    V   L NMY++  + + A +V  ++K +
Sbjct: 591 IHGYIELAHWAAEHLFKLKPQHSGYYSV---LSNMYAEAGKWDEANQVRKLMKSR 642


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1134

 Score =  330 bits (847), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 207/654 (31%), Positives = 334/654 (51%), Gaps = 46/654 (7%)

Query: 256  LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
            L ++T N LI  Y +  +  +A ++   M       +V +WT ++SG   NG  + +L L
Sbjct: 402  LNLITSNYLIDMYCKCREQLIAYKVFDSMPE----RNVVSWTALMSGHVLNGDLNGSLSL 457

Query: 316  FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
            F EM   G+ PN  T ++ + AC  L AL  G++IH   +K+GF   V VGNSL++MYSK
Sbjct: 458  FTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSK 517

Query: 376  CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP--PNVITWN 433
            C  +  AE+VF  +  + + SWN+MIAGY  AGY  +A   F  MQE+ +   P+  T  
Sbjct: 518  CGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLT 577

Query: 434  VLI-----SGYIQNGNEDEA-------------------VDLFQRMGK-------NDKVK 462
             L+     +G I  G +                      VDL+ + G         D++K
Sbjct: 578  SLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIK 637

Query: 463  RNTA-SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
              T  SW+SLI GY Q G    A+G+F+++Q      +   + S++   A      + K+
Sbjct: 638  EKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQ 697

Query: 522  IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
            +   V++        V NSL+D Y K G +  +   F  M  KD+I+W  +I GY  HG 
Sbjct: 698  MQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGL 757

Query: 582  WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
               A+ +F++M    ++P+   +L+++ A S +GM+  G+++F  + E   I P +EHY+
Sbjct: 758  GKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYA 817

Query: 642  AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
             ++DL GR+G+L+EA   ++ MPI+P+  IW+ LL+ CR+HG+I+L     + L  ++  
Sbjct: 818  CVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGK 877

Query: 702  DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
            +     ++  +Y   G   +    R+L      +   G  W+E++  V+ F +G  S   
Sbjct: 878  NPANYVMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPL 937

Query: 762  SDLLYSWLQNVPENVTARSS------HSGLCIEEEEKEEISGIHSEKLALAFALI--GSS 813
            + ++   L+ V   +           H    I++E KEE    HSEKLA+  AL   G +
Sbjct: 938  TLVIQETLKEVERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLN 997

Query: 814  QAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
            Q   TIR+ KN+R+CV CHE  K +S +      + D+   H F++G CSCGDY
Sbjct: 998  QKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 211/454 (46%), Gaps = 45/454 (9%)

Query: 44  VLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAK 103
           +L S   + + V  N Y+  L+  I +NS    R   + LNL+T         L+ +Y K
Sbjct: 367 LLHSPTEEDSHVLENCYV--LEFIIFTNSNF--RLSGSGLNLIT------SNYLIDMYCK 416

Query: 104 CGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKI 163
           C     A +VF+ M ERN+ +W+A++  +  +      + LF  M + G++P++F F   
Sbjct: 417 CREQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPNEFTFSTN 476

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG 223
           L+ACG     E G  +H   +K+G   +  V NS++ +Y KCG++  A + F  M  +  
Sbjct: 477 LKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSL 536

Query: 224 VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI--LIRSYNQLG--------- 272
           ++WN+MI+GY   G    A   F  M   +IK     F +  L+++ +  G         
Sbjct: 537 ISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIH 596

Query: 273 --------QCDVAMEMVKRMESLGIT----------------PDVFTWTCMISGFAQNGR 308
                    C  +  +   +  L +                   + +W+ +I G+AQ G 
Sbjct: 597 GFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGD 656

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
             +A+ LFK +  +    +   ++S I    D   L  G ++ +L VK+    +  V NS
Sbjct: 657 FVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNS 716

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           L++MY KC  ++ AE+ F  ++ KDV SW  MI GY + G   KA  +F KM   ++ P+
Sbjct: 717 LVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPD 776

Query: 429 VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
            + +  ++S    +G   E  +LF ++ +   +K
Sbjct: 777 EVCYLAVLSACSHSGMIKEGEELFSKLLETQGIK 810



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 195/412 (47%), Gaps = 50/412 (12%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG LN ++++   +  QG      T+   L+AC   N++    ++H F L +  E+ V V
Sbjct: 448 NGDLNGSLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 507

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y+KCG +++A +VF  M  R+L +W+AMI  Y         +  F +M +  +
Sbjct: 508 GNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKI 567

Query: 154 --FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR--VRNSVLAVYVKCGKLI 209
              PD+F    +L+AC + G   AGK +H  +++ G  C     +  S++ +YVKCG L 
Sbjct: 568 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLF 627

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------- 261
            AR+ F+ + EK  ++W+S+I GY Q G+  EA  LF ++  +E+   + +F        
Sbjct: 628 SARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRL--QELSSQIDSFVLSSIIGV 685

Query: 262 -----------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
                                        N L+  Y + G  D A +    M+      D
Sbjct: 686 FADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQ----LKD 741

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           V +WT MI+G+ ++G   +A+ +F +M    + P+ V   + +SAC+    +  G E+ S
Sbjct: 742 VISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFS 801

Query: 353 -LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIA 402
            L    G    V     ++++  +   L+ A+ + D +  K +V  W ++++
Sbjct: 802 KLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLS 853


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 195/602 (32%), Positives = 327/602 (54%), Gaps = 41/602 (6%)

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
           N  ++  L +   ++   + P+       +  CT L  L  G  +H+  +   F +D+++
Sbjct: 69  NPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVI 128

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE---LFIKMQE 422
            NS++ MY+KC  LE A +VFD +  KDV +W SMI GY Q GY   A     LF++M  
Sbjct: 129 KNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVR 188

Query: 423 SDVPPNVITWNVLIS-----GYIQNGNE-----------------DEAVDLFQRMGK--- 457
             + PN    + L+      G   +G +                    VD++ R G+   
Sbjct: 189 DGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRE 248

Query: 458 -----NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
                ++   +N  SWN+LI+G+ + G+   ALG+F KMQ   F     T  ++L + + 
Sbjct: 249 SRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSST 308

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 572
             +  + K +H  +++   +    V N+L+  YAKSGNI  ++ +FD +   D+++ NS+
Sbjct: 309 TGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSM 368

Query: 573 ICGYVLHGFWHAALDLFDQMKSF-GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
           + GY  HG    A++LF++M  +  ++PN  TFLS++ A S AG++D G   F  + + Y
Sbjct: 369 LIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYF-ELMKKY 427

Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
            + P + HY+ ++DL+GR+G L++A  FIE+MPIEP+++IW ALL A ++H N ++   A
Sbjct: 428 GLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYA 487

Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
            +++ +L+P       L+  IYA  G+ +D  KVRK  +++  +      W+E++N V+ 
Sbjct: 488 AQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHI 547

Query: 752 FVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALA 806
           F     S    + +Y   +N+ + +        +SH  + ++++EKE     HSEKLALA
Sbjct: 548 FSANDISHPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALA 607

Query: 807 FALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGD 866
           FAL+ +++    IRI+KNIR+C  CH   KYVS++   EI + D+   HHF++G CSC D
Sbjct: 608 FALL-NTKPGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRD 666

Query: 867 YW 868
           YW
Sbjct: 667 YW 668



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 228/530 (43%), Gaps = 80/530 (15%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-N 84
           DT+L     N      + VLD I     +  R  Y  LL+ C     +   + +H  L N
Sbjct: 60  DTNLLRPSLNPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMN 119

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD---QRWREV 141
                D+ +K  +L +YAKCG L+ AR+VF++M  +++ TW++MI  YS+D         
Sbjct: 120 SKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTA 179

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
           + LF  MV+DGL P++F    +++ CG  G    GK +H    K G      V +S++ +
Sbjct: 180 LVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDM 239

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           Y +CG+L  +R  F+ ++ K+ V+WN++ISG+ + GE +EA  LF KM RE       T+
Sbjct: 240 YARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTY 299

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLG-------------------------------IT 290
           + L+ S +  G  +    +   M   G                               + 
Sbjct: 300 SALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVK 359

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMS-FVGVMPNGVTITSAISACTDLKALAMGME 349
            DV +   M+ G+AQ+G   +A++LF+EM  +V + PN +T  S ++AC+    L  G+ 
Sbjct: 360 VDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLY 419

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
              L  K G    +    ++++++ +   L+ A+                          
Sbjct: 420 YFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSF------------------------ 455

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
                     ++E  + PN   W  L+     + N +      Q++ + D       +  
Sbjct: 456 ----------IEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLL 505

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
           S I  Y   GQ  +   V ++M+ S         L   PAC+++   N V
Sbjct: 506 SNI--YASAGQWKDVAKVRKEMKDSG--------LKKEPACSWVEIENSV 545



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 185/400 (46%), Gaps = 49/400 (12%)

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
           E D   +N ++     +G+  +   +   +   + +  +V  N ++  Y + G  ++A +
Sbjct: 88  EPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQ 147

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQA---LDLFKEMSFVGVMPNGVTITSAIS 336
           +   M       DV TWT MI+G++Q+G  S A   L LF EM   G+ PN   ++S + 
Sbjct: 148 VFDEM----CVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVK 203

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
            C  L +   G +IH    K GF ++V VG+SL++MY++C EL  +  VFD ++ K+  S
Sbjct: 204 CCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVS 263

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------------------ 432
           WN++I+G+ + G   +A  LF+KMQ         T+                        
Sbjct: 264 WNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMM 323

Query: 433 -----------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK 481
                      N L+  Y ++GN  +A  +F R+     VK +  S NS++ GY Q G  
Sbjct: 324 KSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRL-----VKVDVVSCNSMLIGYAQHGLG 378

Query: 482 NNALGVFRKMQSSC-FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
             A+ +F +M       PN +T LSVL AC++    ++       + +  LE  L    +
Sbjct: 379 KEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTT 438

Query: 541 LIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
           ++D + ++G +  +++  + M    +   W +L+    +H
Sbjct: 439 VVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMH 478


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 211/615 (34%), Positives = 320/615 (52%), Gaps = 60/615 (9%)

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           AL+ +  M  + +  +   I S + AC+ +    MG EIH  +VK G   DV V N+L+ 
Sbjct: 93  ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ-----------------AGY--CGK 412
           MYS+C  L +A  +FD + ++DV SW++MI  Y                   AGY  C  
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212

Query: 413 AYE---LFIKMQESDVPPNVITWNVLI-----SGYIQNGNEDEA---------------- 448
             E   LF++M E +V PN IT   LI      G +Q G    A                
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272

Query: 449 -VDLFQRMGK-------NDKVK-RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
            VD++ + G+        D +K ++  +W ++I+ Y Q    + A  +F +M+ +   PN
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
            +T++S+L  CA   A +  K  H  + ++ +E  + +  +LID YAK G+I  ++ +F 
Sbjct: 333 ELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFS 392

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
               +DI TWN ++ GY +HG+   AL LF +M++ G+KPN  TF+  + A S AG+V  
Sbjct: 393 EAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVE 452

Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
           GK +F  +   + ++P +EHY  M+DL GR+G L+EA + IE MP+ P+ +IW A+L AC
Sbjct: 453 GKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAAC 512

Query: 680 RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFG 739
           +IH N ++  LA   L  LEP +   + L+  IYA   +  D   +RK  ++   +   G
Sbjct: 513 KIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPG 572

Query: 740 QCWIEVKNLVYTFVTGGWS----ESYSDLLYSWLQNVPENVTARSSHSGL-CIEEEEKEE 794
              IEV  LV+ F  G  +    E  S++L    + + E      +   L  I+EEEKE 
Sbjct: 573 MSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNIDEEEKET 632

Query: 795 ISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
               HSEKLA+AF LI  S AP T IR+VKN+R+C  CH   K +S ++   I + D   
Sbjct: 633 ALNYHSEKLAMAFGLI--STAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIVRDRNR 690

Query: 854 LHHFKNGQCSCGDYW 868
            HHF+ G CSCG YW
Sbjct: 691 FHHFREGSCSCGGYW 705



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 208/469 (44%), Gaps = 65/469 (13%)

Query: 106 CLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQ 165
           CLD  +++   +  R  +  +  +     +   R  +  +  M +  +  D F+ P +L+
Sbjct: 59  CLDQTQQLHAHI-TRTHFNHAQQVSFSPFESHPRYALNTYTYMRKLDIEVDSFIIPSVLK 117

Query: 166 ACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA 225
           AC        GK +H   +K G+     V N+++ +Y +CG L+ AR  F+ M E+D V+
Sbjct: 118 ACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVS 177

Query: 226 WNS----------------------MISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           W++                      MI+GY +  + +E  RLF +M  E +    +T   
Sbjct: 178 WSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLS 237

Query: 264 LIRSYNQLGQCDVAMEMVKRMES------LGIT--------------------------- 290
           LI S   +G    A+++ KR+ +       G++                           
Sbjct: 238 LIISCGFVG----AVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSM 293

Query: 291 --PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
              DV TWT MIS +AQ      A  LF +M   GV PN +T+ S +S C    AL MG 
Sbjct: 294 KNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGK 353

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
             H+   K G   DV++  +LI+MY+KC ++  A+R+F    D+D+ +WN M+AGY   G
Sbjct: 354 WFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHG 413

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           Y  KA +LF +M+   V PN IT+   +      G   E   LF++M  +  +      +
Sbjct: 414 YGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHY 473

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASN 517
             ++    + G  + A   ++ ++S    PN     ++L AC     SN
Sbjct: 474 GCMVDLLGRAGLLDEA---YKMIESMPVTPNIAIWGAMLAACKIHKNSN 519



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 183/404 (45%), Gaps = 68/404 (16%)

Query: 62  NLLQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           ++L+AC   +   + +++H F     LV+  DVFV   L+ +Y++CG L  AR +F+ M 
Sbjct: 114 SVLKACSQISVARMGKEIHGFSVKNGLVS--DVFVVNALMQMYSECGSLVSARLLFDKMS 171

Query: 119 ERNLYTWS----------------------AMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           ER++ +WS                      AMI  Y R     E   LF  M+++ +FP+
Sbjct: 172 ERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPN 231

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           D     ++ +CG  G  + GK +H+ +++ G      +  +++ +Y KCG++  AR  F+
Sbjct: 232 DITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFD 291

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------C-------- 250
           SM  KD + W +MIS Y Q    D A +LF +M                  C        
Sbjct: 292 SMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDM 351

Query: 251 ---------REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                    ++ +++ V+    LI  Y + G    A    +R+ S  I  D+ TW  M++
Sbjct: 352 GKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGA----QRLFSEAIDRDICTWNVMMA 407

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK-MGFT 360
           G+  +G   +AL LF EM  +GV PN +T   A+ AC+    +  G  +    +   G  
Sbjct: 408 GYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLV 467

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAG 403
             V     ++++  +   L+ A ++ + M    ++  W +M+A 
Sbjct: 468 PKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAA 511


>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 194/536 (36%), Positives = 288/536 (53%), Gaps = 42/536 (7%)

Query: 262 NILIRSYNQLGQCDVA--MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           N+L+ +   +  C +A  M+  ++M       DVF W  +I G+A  G   +AL L+  M
Sbjct: 60  NLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNM 119

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
              G+ P+  T    + +C  L AL  G E+H   VK GF  DV V +SL+ MYS+  E 
Sbjct: 120 HGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGET 179

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------- 432
              E VF  +  +++ SW ++IAGY Q  Y  +   +F +M  S   PN +T        
Sbjct: 180 LGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPAC 239

Query: 433 ----------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                                       N LI+ Y + GN + A  LF  M     V +N
Sbjct: 240 AGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGM-----VVQN 294

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             SWN++IA Y+Q     NA+ +FR+MQ+     + +T++SV+ ACA L A N  + +H 
Sbjct: 295 LVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHE 354

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
            V R+ LE ++ + N+LID YAK GNI  +R +F+ +  + +++W S+I     HG    
Sbjct: 355 LVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGED 414

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMI 644
           AL LF +MK  G+KPN  TF ++  A   +G+V+ G+K F S+   Y I+P +EH + M+
Sbjct: 415 ALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMV 474

Query: 645 DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVL 704
           DL GR+G L EA EFI+ MP+EPD S+W ALL +CRIH N++LA L  E+LF L+P  V 
Sbjct: 475 DLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVT 534

Query: 705 IQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
              L+  IYA  G+ EDA ++RKL  E   +   G   +EV    +TF++G  S+S
Sbjct: 535 FYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVNRRFHTFLSGSRSQS 590



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 192/406 (47%), Gaps = 42/406 (10%)

Query: 90  DVFVKTKLLSVYAKC--GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           ++ + TKL+ + A C    +D AR++F+ M +R+++ W+ +I  Y+      E + L+  
Sbjct: 60  NLLLSTKLI-ITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSN 118

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M   GLFPD++ FP ++++C        GK +H  ++K G      V++S++A+Y + G+
Sbjct: 119 MHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGE 178

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------ 261
            +     F  M  ++ V+W ++I+GY Q     E   +F +M     +   VT       
Sbjct: 179 TLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPA 238

Query: 262 -----------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
                                        N LI  Y + G  + A  +   M    +  +
Sbjct: 239 CAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGM----VVQN 294

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           + +W  MI+ + QN   + A+ LF+ M    V  + +T+ S ISAC  L AL  G  +H 
Sbjct: 295 LVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHE 354

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
           L  + G   +V + N+LI+MY+KC  ++ A  VF+ +  + V SW SMI      G+   
Sbjct: 355 LVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGED 414

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           A +LF +M++  V PN  T+  + +    +G  +E    F+ M ++
Sbjct: 415 ALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRD 460



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 209/461 (45%), Gaps = 49/461 (10%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT---EIDVF 92
           G   EA+ +  ++   G      T+  ++++C   +++   +++H   N+V    + DVF
Sbjct: 107 GPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHC--NIVKHGFDSDVF 164

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V++ L+++Y++ G       VF +M  RN+ +W+A+I  Y +++ ++E + +F  MV  G
Sbjct: 165 VQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSG 224

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             P+      +L AC        GKL+H   IKLG+     + N+++A+Y KCG +  AR
Sbjct: 225 TQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETAR 284

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------- 261
             F+ M  ++ V+WN+MI+ Y Q      A +LF +M  E++    +T            
Sbjct: 285 SLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLG 344

Query: 262 ------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                   N LI  Y + G  D+A E+ +R+        V +WT
Sbjct: 345 ALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLP----CRSVVSWT 400

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVK 356
            MI   A +G    AL LF  M   GV PN  T  +  +AC     +  G +   S+   
Sbjct: 401 SMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRD 460

Query: 357 MGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
                 V     ++++  +   L EA E +  M  + DV  W +++ G C+     +  E
Sbjct: 461 YSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALL-GSCRIHSNLELAE 519

Query: 416 LFIKMQESDVPPNVITWNVLISG-YIQNGNEDEAVDLFQRM 455
           L +  +   + P  +T+ VL+S  Y + G  ++A  L + M
Sbjct: 520 L-VAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLM 559



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 173/368 (47%), Gaps = 18/368 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N    E + V   +   G +    T +++L AC     ++L + +H + + L  + DV +
Sbjct: 207 NRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSL 266

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+++Y KCG ++ AR +F+ M  +NL +W+AMI AY ++      V+LF  M  + +
Sbjct: 267 TNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKV 326

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             D      ++ AC + G    G+ MH LV + G+     + N+++ +Y KCG +  AR 
Sbjct: 327 DFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLARE 386

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            FE +  +  V+W SMI      G  ++A +LF +M  E +K    TF  +  +    G 
Sbjct: 387 VFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGL 446

Query: 274 CDVAMEMVKRMESL----GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            +   E  K  ES+     I P V    CM+    + G   +A +   +M    V P+  
Sbjct: 447 VE---EGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMP---VEPDVS 500

Query: 330 TITSAISACTDLKALAMGMEIHSL-AVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVF 386
              + + +C     +   +E+  L A K+   D   V   ++  N+Y++    E A R+ 
Sbjct: 501 VWGALLGSCR----IHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLR 556

Query: 387 DMIKDKDV 394
            +++++++
Sbjct: 557 KLMEEREL 564


>gi|296085848|emb|CBI31172.3| unnamed protein product [Vitis vinifera]
          Length = 644

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 210/630 (33%), Positives = 311/630 (49%), Gaps = 96/630 (15%)

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
           SL   P    W  +I  +  +G    +L  F +M   G  P+     S + +CT +K L 
Sbjct: 64  SLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLR 123

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSK---CEELEAAERVFDMIKDKDVYSWNSMIA 402
            G  +H   +++G   D+   N+L+NMYSK    EE+   ++VFD  K  DVYS      
Sbjct: 124 FGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEK-- 181

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
              ++ Y G   ++F  M                                         K
Sbjct: 182 ---ESYYLGSLRKVFEMMP----------------------------------------K 198

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
           R+  SWN++I+G  Q G   +AL + R+M ++   P+  T+ SVLP  A  V   K KEI
Sbjct: 199 RDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEI 258

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           HG  +R   ++ + + +SLID YAK   +  S  +F  +   D I+WNS+I G V +G +
Sbjct: 259 HGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMF 318

Query: 583 HAALDLFDQM------------------------------------KSFGLKPNRGTFLS 606
              L  F QM                                    +  G+KPN   F++
Sbjct: 319 DEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRMEGVKPNYVAFMA 378

Query: 607 IILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
           ++ A S AG+VD   K F S+T+ Y+IIP +EHY+A+ DL GR G+LEEA EFI DM IE
Sbjct: 379 VLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISDMHIE 438

Query: 667 PDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR 726
           P  S+W  LL ACR+H NI+LA    ++LF ++P ++    L+  IY+  G+ +DA K+R
Sbjct: 439 PTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAYVLLSNIYSAAGRWKDARKLR 498

Query: 727 KLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--------TA 778
              R+   +      WIE+KN V+ FV G  S  Y D +   L+ + E +        T 
Sbjct: 499 IAMRDKGMKKKPACSWIEIKNKVHAFVAGDKSHPYYDRINEALKVLLEQMEREGYVLDTT 558

Query: 779 RSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
              H    +EEE+K  +   HSE+LA+ F +I S+ A  TIR+ KN+R+CV CH   K++
Sbjct: 559 EVLHD---VEEEQKRYLLCSHSERLAITFGII-STPAGTTIRVTKNLRVCVDCHTATKFI 614

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S +   EI + D+   HHFK+G+CSCGD+W
Sbjct: 615 SKIVGREIVVRDNSRFHHFKDGKCSCGDFW 644



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 106/522 (20%), Positives = 211/522 (40%), Gaps = 74/522 (14%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM-RER 120
            LLQ      S   A++LHA +   +     + + +LS+Y+    L D+  +F  +    
Sbjct: 10  TLLQNPSSVKSKSQAKQLHAQILRTSLPSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPP 69

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
               W ++I  Y+    +   +  F  M+  G +PD  +FP +L++C    D   G+ +H
Sbjct: 70  TTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVH 129

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKL-----------------IWA------------ 211
             +I+LGM       N+++ +Y K   L                 +++            
Sbjct: 130 GCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSL 189

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R+ FE M ++D V+WN++ISG  Q G +++A  +  +M   +++    T + ++  + + 
Sbjct: 190 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 249

Query: 272 GQCDVAMEMVKRMESLGITPDVF-------------------------------TWTCMI 300
                  E+       G   DVF                               +W  +I
Sbjct: 250 VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSII 309

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM-GF 359
           +G  QNG   + L  F++M    + PN V+ +S + AC  L  L +G ++H   ++M G 
Sbjct: 310 AGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRMEGV 369

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAGYCQ-AGYCGKAYELF 417
             + +   +++   S    ++ A + F+ M +D  +       A      G  G+  E +
Sbjct: 370 KPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAY 429

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
             + +  + P    W+ L++    + N + A  + +++   D   +N  ++  L   Y  
Sbjct: 430 EFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVD--PQNIGAYVLLSNIYSA 487

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
            G+  +A  +   M+           +   PAC+++   NKV
Sbjct: 488 AGRWKDARKLRIAMRDKG--------MKKKPACSWIEIKNKV 521



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 82/165 (49%), Gaps = 16/165 (9%)

Query: 60  YINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           Y+NLL+           +++H + +    + DVF+ + L+ +YAKC  +DD+  VF  + 
Sbjct: 249 YVNLLKG----------KEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLP 298

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           + +  +W+++I    ++  + E ++ F  M+   + P+   F  I+ AC +      GK 
Sbjct: 299 QHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQ 358

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKC---GKLIWARRFFESMDE 220
           +H  +I+  M  V+    + +AV   C   G +  A ++F SM +
Sbjct: 359 LHGYIIR--MEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQ 401


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  330 bits (846), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 201/644 (31%), Positives = 327/644 (50%), Gaps = 45/644 (6%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N +++ Y + G    A ++   M       ++ +W  +IS +A+NG   +   +F  M  
Sbjct: 49  NSVLKMYCKCGSLADARKVFDEMRE----RNLVSWNTIISAYAENGVFDKGFCMFSNMLE 104

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
           +   PNG T    + +  +   L +G +IHS A++ G   +  V  ++ NMY KC  LE 
Sbjct: 105 LETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEG 164

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL------ 435
           AE VF+ + +K+  +W  ++ GY QA     A  LF KM    V  +   ++++      
Sbjct: 165 AELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAG 224

Query: 436 ---------ISGYI-QNGNEDEA------VDLFQRMGKNDKVKR--------NTASWNSL 471
                    I G+I + G E E       VD + +    +   +        N  SW++L
Sbjct: 225 LEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSAL 284

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           I GY Q+G+   AL  F  +++     N  T  S+  AC+ L   N   + H   ++ SL
Sbjct: 285 ITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSL 344

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
            +     +++I  Y++ G + Y+  +F+ +   D + W ++I GY   G    AL LF +
Sbjct: 345 VAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRR 404

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           M+  G++PN  TF++++ A S +G+V  G++   S++  Y +   I+HY  M+D+Y R+G
Sbjct: 405 MQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAG 464

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
            L+EA+E I  MP  PD+  W+ LL  C  + N+++  LA E LF L+P D     L+  
Sbjct: 465 FLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFN 524

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN 771
           +YA  GK ++A  VRK+  E   R      WI VK  V+ F+ G      ++ +YS L+ 
Sbjct: 525 LYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLEA 584

Query: 772 VPENVTARSSHSGLCIEEE------EKEEISGIHSEKLALAFALIGS-SQAPHTIRIVKN 824
           + ++V      +GL  EE+      E++E   +HSE+LALAF LI + S AP  + + KN
Sbjct: 585 LNDSVI--KEETGLLTEEDVSNSLPERKEQLLVHSERLALAFGLISTPSSAP--VVVFKN 640

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +R C  CH+  K VS++   EI + DS   HHFK G+CSC DYW
Sbjct: 641 LRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECSCNDYW 684



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 230/491 (46%), Gaps = 35/491 (7%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-LVTEIDVFVKTKLLSVYAKCGCLDDA 110
           G  V   +Y  L +AC    S+   R  H  +   V     F++  +L +Y KCG L DA
Sbjct: 5   GISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADA 64

Query: 111 REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
           R+VF++MRERNL +W+ +I AY+ +  + +   +F  M++    P+   +   L++  N 
Sbjct: 65  RKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNP 124

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
              E GK +HS  I+ G+     V  ++  +YVKCG L  A   FE M EK+ VAW  ++
Sbjct: 125 SGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIM 184

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI- 289
            GY Q     +A  LF KM  E ++L    F+I++++   L + +   ++   +  LG+ 
Sbjct: 185 VGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLE 244

Query: 290 ------------------------------TPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
                                          P+  +W+ +I+G+ Q G   +AL  F+ +
Sbjct: 245 SEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESL 304

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
               V  N  T TS   AC+ L     G + H+ A+K          +++I MYS+C  L
Sbjct: 305 RTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRL 364

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
           + A RVF+ I D D  +W ++IAGY   G   +A +LF +MQ+  V PN +T+  +++  
Sbjct: 365 DYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTAC 424

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
             +G   E     + M  N  V      ++ ++  Y + G    AL + R M    F P+
Sbjct: 425 SHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMP---FSPD 481

Query: 500 CVTILSVLPAC 510
            ++   +L  C
Sbjct: 482 AMSWKCLLGGC 492



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/543 (23%), Positives = 246/543 (45%), Gaps = 65/543 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG  ++   +  ++     K   +TYI  L++ ++ + + + +++H+  +      +  V
Sbjct: 89  NGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASV 148

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T + ++Y KCG L+ A  VFE M E+N   W+ ++  Y++ +R  + + LF  MV +G+
Sbjct: 149 NTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALFAKMVNEGV 208

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             D+++F  +L+AC    +   G+ +H  ++KLG+     V   ++  YVKC  L  A +
Sbjct: 209 ELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATK 268

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------ 261
            FE + E + V+W+++I+GY Q+GE +EA + F+ +    + +   T+            
Sbjct: 269 AFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALAD 328

Query: 262 -----------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
                                  + +I  Y++ G+ D A  + + ++     PD   WT 
Sbjct: 329 FNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDD----PDAVAWTA 384

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKM 357
           +I+G+A  G   +AL LF+ M   GV PN VT  + ++AC+    +  G + + S++   
Sbjct: 385 IIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNY 444

Query: 358 GFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAG---YCQAGYCGKA 413
           G    +   + ++++YS+   L EA E +  M    D  SW  ++ G   Y        A
Sbjct: 445 GVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELA 504

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            E   ++   D    ++ +N+    Y   G   EA ++ + M + +  K  + SW ++  
Sbjct: 505 AENLFQLDPEDTAGYILMFNL----YASFGKWKEAANVRKMMAERNLRKELSCSWITVKG 560

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
                        V R +     +P    I S L A    +  + +KE  G +    + +
Sbjct: 561 ------------KVHRFIVGDKHHPQTEEIYSKLEA----LNDSVIKEETGLLTEEDVSN 604

Query: 534 SLP 536
           SLP
Sbjct: 605 SLP 607



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 119/261 (45%), Gaps = 16/261 (6%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF 92
           C  G   EA+   +S+ T+   +   TY ++ QAC      +   + HA   + + +  +
Sbjct: 289 CQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADA-IKSSLVAY 347

Query: 93  V--KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
              ++ ++++Y++CG LD A  VFE + + +   W+A+I  Y+      E ++LF  M  
Sbjct: 348 QHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQD 407

Query: 151 DGLFPDDFLFPKILQACGNCG-DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            G+ P+   F  +L AC + G   E  + + S+    G++      + ++ +Y + G L 
Sbjct: 408 CGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQ 467

Query: 210 WARRFFESMD-EKDGVAWNSMISG-----YFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
            A     SM    D ++W  ++ G       +IGE   A  LF ++  E+    ++ FN+
Sbjct: 468 EALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGEL-AAENLF-QLDPEDTAGYILMFNL 525

Query: 264 LIRSYNQLGQCDVAMEMVKRM 284
               Y   G+   A  + K M
Sbjct: 526 ----YASFGKWKEAANVRKMM 542


>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 211/699 (30%), Positives = 348/699 (49%), Gaps = 67/699 (9%)

Query: 133 SRDQRWREVVELFF-LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCV 191
           S    W+E ++L+  + +      D ++ P IL+AC N   F  G  MH  +IK G    
Sbjct: 23  SYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNT-SFNLGTAMHGCLIKQGCQSS 81

Query: 192 RRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR 251
             + NS +  Y+K G L  A+R F+S   KD V+WN M+ G F  G        F K   
Sbjct: 82  TSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRF 141

Query: 252 EEIKLGVVTFNILIRSYNQLG------------------------------QCDVAMEMV 281
              +  + +  ++I+++ +L                                 +V M   
Sbjct: 142 AHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEVHMYFA 201

Query: 282 KRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACT 339
            ++   + +  DV +W+ MI GF Q G   Q   +F+ M +  G+ P+GVT+ S + ACT
Sbjct: 202 HKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACT 261

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           +LK +++G  +H L +  G  DD+ VGNSLI+MYSKC  + +A + F  I +K++ SWN 
Sbjct: 262 NLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNL 321

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-NVL--------------ISGYI-QNG 443
           M++ Y       +A  L   M       + +T  NVL              + G I + G
Sbjct: 322 MLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKG 381

Query: 444 NE------DEAVDLFQ--------RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
            E      +  +D +         RM  +   K++  +W+++IAG+ + G+ + A+ VF+
Sbjct: 382 YESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFK 441

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           +M      PN V+I++++ ACA      + K  HG  +RR L S + +  S+ID Y+K G
Sbjct: 442 QMNEEVI-PNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDIGTSIIDMYSKCG 500

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
           +I  S   F+ +  K+++ W+++I  + ++G  H AL LF+++K  G KPN  T LS++ 
Sbjct: 501 DIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLS 560

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP--IEP 667
           A S  G+++ G   F S+ + + I P +EHYS ++D+  R+GK  EA+E IE +P  +E 
Sbjct: 561 ACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEA 620

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
            +SIW  LL++CR +GNI L   A  R+  LEP       L   +YA CG   D+ K+R+
Sbjct: 621 GASIWGTLLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKMRR 680

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
           L +E   +   G   + + +  + FV G      +D +Y
Sbjct: 681 LAKEKGVKVVAGYSLVHINSQTWRFVAGDVLNPRADEIY 719



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 139/559 (24%), Positives = 239/559 (42%), Gaps = 89/559 (15%)

Query: 306 NGRTSQALDLFKEMSFVGV-MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           +G   +AL L+ E+   G  + +   + S + AC++  +  +G  +H   +K G      
Sbjct: 25  SGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSN-TSFNLGTAMHGCLIKQGCQSSTS 83

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
           + NS I+ Y K  +L++A+R FD  K+KD  SWN M+ G    G        FIK + + 
Sbjct: 84  IANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAH 143

Query: 425 VPPNVITWNVLIS---------------GYIQNGN-------EDEAVDLF--------QR 454
             PN+ +  ++I                GYI           ++  + L+         +
Sbjct: 144 FQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEVHMYFAHK 203

Query: 455 MGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC-FYPNCVTILSVLPACAYL 513
           +     V+ +  SW+ +I G+ Q+G+      +FR M +     P+ VT++SVL AC  L
Sbjct: 204 LFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNL 263

Query: 514 VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
              +    +HG V+ R LE  L V NSLID Y+K  N+  +   F  +  K+II+WN ++
Sbjct: 264 KDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLML 323

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGT----------FLSIILAHSLAGMV-----D 618
             Y+L+     AL L   M   G + +  T          FL  +   S+ G++     +
Sbjct: 324 SAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYE 383

Query: 619 LGKKVFCSITECYQIIPMIE---------------HYSAMIDLYGRSGKLEEAMEFIEDM 663
             + +  S+ + Y    ++E                +S MI  + R+GK +EA+   + M
Sbjct: 384 SNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQM 443

Query: 664 PIE--PDSSIWEALLTACRIHGNIDLAV----LAIERLFDLEPGDVLIQRLILQIYAICG 717
             E  P++     L+ AC +   +  +     +A+ R       +V I   I+ +Y+ CG
Sbjct: 444 NEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGL---ASEVDIGTSIIDMYSKCG 500

Query: 718 KPEDALKV-RKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN--VPE 774
             E +++   ++ ++N        CW     ++  F   G +     L     QN   P 
Sbjct: 501 DIEASIRAFNQIPQKNV------VCW---SAMISAFRINGLAHEALMLFEKIKQNGTKPN 551

Query: 775 NVTARS-----SHSGLCIE 788
            VTA S     SH GL  E
Sbjct: 552 AVTALSLLSACSHGGLMEE 570


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 234/751 (31%), Positives = 346/751 (46%), Gaps = 154/751 (20%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N VL+   KCG++  AR+ F+ M ++D  +WN+MI  Y   G  +EA +LF         
Sbjct: 45  NWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLF--------- 95

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
                +   IRS                           TW+ +ISG+ + G   +AL+L
Sbjct: 96  -----YETPIRS-------------------------CITWSSLISGYCRYGCDVEALEL 125

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           F EM + G  PN  T  S +  C+    L  G +IH+ A+K  F  +  V   L++MY+K
Sbjct: 126 FWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAK 185

Query: 376 CEELEAAERVFDMIKDKDVYS-WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           C+ +  AE +F++  DK  +  W +M+ GY Q G   KA E F  M+   +  N  T+  
Sbjct: 186 CKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPS 245

Query: 435 LI---------------------SGYIQNGNEDEA-VDLFQRMGKNDKVKR--------N 464
           ++                     SG+  N     A VD++ + G     +R        +
Sbjct: 246 ILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDD 305

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             SWNS+I G  + G    AL +FR M                      +   K+ E   
Sbjct: 306 PVSWNSMIVGCVRQGLGEEALSLFRIMH---------------------LRHMKIDEFTY 344

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
             L         V N+L+D YAK G   Y+  +F+ M+ KD+I+W SL+ G V +G +  
Sbjct: 345 PSL---------VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEE 395

Query: 585 ALDLFDQMKSFGLKPNRGTFLSII--LAHSLAGMV------------------------- 617
           AL LF +M+  G+ P++    +++  L +SL  M                          
Sbjct: 396 ALRLFCEMRIMGIHPDQIVIAAVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWT 455

Query: 618 ---------DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
                      G+  F S+ E Y I P  EHY+ MIDL GRSGKL EA E +  M ++PD
Sbjct: 456 ALIVGYAQNGRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPD 515

Query: 669 SSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKL 728
           +++W+ALL ACR+HGN++L   A   LF+LEP + +   L+  +Y+  GK E+A K R+L
Sbjct: 516 ATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRL 575

Query: 729 ERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN----------VPENVTA 778
            +        G  WIE+ + V+ F++   S   +  +YS +            VP+   A
Sbjct: 576 MKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFA 635

Query: 779 RSSHSGLCIEEEEKEEISGIHSEKLALAFALIG-SSQAPHTIRIVKNIRMCVHCHETAKY 837
                   ++EE KE     HSEKLA+AF L+     AP  IRI KN+R+C  CH   KY
Sbjct: 636 LHD-----MDEEGKELGLAYHSEKLAVAFGLLTMPPGAP--IRIFKNLRICGDCHTAMKY 688

Query: 838 VSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           VS + H  + L DS C HHF+ G CSC DYW
Sbjct: 689 VSGVFHRHVILRDSNCFHHFREGACSCSDYW 719



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 228/456 (50%), Gaps = 53/456 (11%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VFVKTKL 97
           EA+ +   +  +G +  + T+ ++L+ C     +   +++HA   + T+ D   FV T L
Sbjct: 121 EALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHA-IKTQFDSNAFVVTGL 179

Query: 98  LSVYAKCGCLDDAREVFE-DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           + +YAKC C+ +A  +FE    +RN   W+AM+  YS++    + +E F  M  +G+  +
Sbjct: 180 VDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECN 239

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            F FP IL ACG+      G  +H  +++ G      V ++++ +Y KCG L  ARR  E
Sbjct: 240 QFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLE 299

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-----NILIRSYNQL 271
           +M+  D V+WNSMI G  + G  +EA  LF  M    +K+   T+     N L+  Y + 
Sbjct: 300 TMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVNNALVDMYAKR 359

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           G  D A ++ ++M       DV +WT +++G   NG   +AL LF EM  +G+ P+ + I
Sbjct: 360 GYFDYAFDVFEKM----TDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVI 415

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
            + +SA                           + NSL++MY+KC  +E A +VFD ++ 
Sbjct: 416 AAVLSA---------------------------LDNSLVSMYAKCGCIEDANKVFDSMEI 448

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQE-SDVPPNVITWNVLISGYIQNGNEDEAVD 450
           +DV +W ++I GY Q    G+  + F  M+E   + P    +  +I    ++G   EA +
Sbjct: 449 QDVITWTALIVGYAQN---GRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKE 505

Query: 451 LFQRMGKNDKVKRNTASWNSLIA-----GYQQLGQK 481
           L  +M     V+ +   W +L+A     G  +LG++
Sbjct: 506 LLNQMA----VQPDATVWKALLAACRVHGNVELGER 537



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 128/516 (24%), Positives = 231/516 (44%), Gaps = 56/516 (10%)

Query: 76  ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           ARKL    +++ + D      ++  YA  G L++AR++F +   R+  TWS++I  Y R 
Sbjct: 60  ARKL---FDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRY 116

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
               E +ELF+ M  +G  P+ F +  +L+ C      E GK +H+  IK        V 
Sbjct: 117 GCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVV 176

Query: 196 NSVLAVYVKCGKLIWARRFFE-SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
             ++ +Y KC  ++ A   FE + D+++ V W +M++GY Q G+  +A   F  M  E I
Sbjct: 177 TGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGI 236

Query: 255 KLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
           +    TF  ++ +   +  C    ++   +   G   +VF  + ++  +++ G  S A  
Sbjct: 237 ECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARR 296

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG-FTDDVLVGNSLINMY 373
           + + M     +     I   +      +AL++   +H   +K+  FT   LV N+L++MY
Sbjct: 297 MLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVNNALVDMY 356

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW- 432
           +K    + A  VF+ + DKDV SW S++ G    G   +A  LF +M+   + P+ I   
Sbjct: 357 AKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIA 416

Query: 433 -------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL 485
                  N L+S Y + G  ++A  +F  M   D +     +W +LI GY Q G+  +  
Sbjct: 417 AVLSALDNSLVSMYAKCGCIEDANKVFDSMEIQDVI-----TWTALIVGYAQNGRGRD-- 469

Query: 486 GVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
             F+ M+          +  + P            E + C               +ID  
Sbjct: 470 -YFQSMEE---------VYGIKPG----------PEHYAC---------------MIDLL 494

Query: 546 AKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
            +SG ++ ++ + + M+   D   W +L+    +HG
Sbjct: 495 GRSGKLMEAKELLNQMAVQPDATVWKALLAACRVHG 530



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 159/355 (44%), Gaps = 47/355 (13%)

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           T +   C  L+   +   I       G        N +++  SKC  ++ A ++FD++ D
Sbjct: 10  TFSRKVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPD 69

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP-PNVITWNVLISGYIQNGNEDEAVD 450
           +D  SWN+MI  Y  +G   +A +LF      + P  + ITW+ LISGY + G + EA++
Sbjct: 70  RDECSWNTMIGAYANSGRLNEARKLFY-----ETPIRSCITWSSLISGYCRYGCDVEALE 124

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           LF  M                    Q  G++                PN  T  SVL  C
Sbjct: 125 LFWEM--------------------QYEGER----------------PNQFTWGSVLRVC 148

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD-GMSSKDIITW 569
           +  V   K K+IH   ++   +S+  V+  L+D YAK   I+ +  +F+     ++ + W
Sbjct: 149 SMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLW 208

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF-CSIT 628
            +++ GY  +G  H A++ F  M+  G++ N+ TF SI+ A         G +V  C + 
Sbjct: 209 TAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVR 268

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
             +     +   SA++D+Y + G L  A   +E M ++ D   W +++  C   G
Sbjct: 269 SGFGANVFVG--SALVDMYSKCGDLSNARRMLETMEVD-DPVSWNSMIVGCVRQG 320


>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
 gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 195/668 (29%), Positives = 345/668 (51%), Gaps = 36/668 (5%)

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           AR+ F+++ ++D  +W  M+S Y + G+   A  +FD+M R  +     ++  L+ ++  
Sbjct: 11  ARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLG----SWTALLSAFAL 66

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G  + A  +   M+      D+  WT M++  A       A   F +M    +    V 
Sbjct: 67  SGHHEEAKTLFDTMQER----DLIAWTIMLTVLATFSNIEDAKYHFDQMPERDL----VA 118

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
            T+ ++A  +   +    E      +     ++    SL++ Y +  +++AA RVFD + 
Sbjct: 119 WTAMLAANAERGQMENARETFDQMPER----NLFSWTSLLSAYGRSGDVKAAGRVFDSMP 174

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
           + ++ +W +M+ GY  +G   +A   F  M E D+    I W  ++S Y  NG+     +
Sbjct: 175 EWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDL----IAWTAMLSAYAFNGHLRYTRE 230

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC-----FYPNCVTILS 505
           +FQRM + D +     SW +++A   +      +  +F +M   C       PN VT ++
Sbjct: 231 IFQRMPERDLI-----SWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFIT 285

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           +L AC++L A  + ++IH  V  R  ++ L V N+L++ Y + G +  ++ +FDGM  +D
Sbjct: 286 LLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRD 345

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
           +I+W+S+I  +   G    A++L+ +M S G  P+   F+S++ A S +G+V+     F 
Sbjct: 346 VISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFR 405

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
           SI    Q+ P +EHY+ M+D+ GR+GKL +A + +  MP  P   ++  +L+AC+++ ++
Sbjct: 406 SIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDV 465

Query: 686 DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV 745
           +    A E +F+L+P +      +  IY+   +P+DA ++RKL  E   +   G  WIEV
Sbjct: 466 ERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEV 525

Query: 746 KNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHS 800
            + V+ F+ G       D +Y+ +Q +   +               +EE+EKE +   HS
Sbjct: 526 LDRVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHS 585

Query: 801 EKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNG 860
           EKLA+AF LI S+     +RIVKN+R+C  CH   K +S +   EI + D+   HHF+NG
Sbjct: 586 EKLAIAFGLI-STPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNG 644

Query: 861 QCSCGDYW 868
            CSC DYW
Sbjct: 645 MCSCNDYW 652



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 135/526 (25%), Positives = 238/526 (45%), Gaps = 65/526 (12%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTE 88
           L     +G L+ A  V D +     +    ++  LL A   S     A+ L    + + E
Sbjct: 30  LSIYARSGDLSNAKGVFDRMP----RWSLGSWTALLSAFALSGHHEEAKTL---FDTMQE 82

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
            D+   T +L+V A    ++DA+  F+ M ER+L  W+AM+ A +   +     E F  M
Sbjct: 83  RDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDLVAWTAMLAANAERGQMENARETFDQM 142

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
            +  LF     +  +L A G  GD +A                                 
Sbjct: 143 PERNLFS----WTSLLSAYGRSGDVKA--------------------------------- 165

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             A R F+SM E + VAW +M++GY   G+   A R FD M   ++    + +  ++ +Y
Sbjct: 166 --AGRVFDSMPEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDL----IAWTAMLSAY 219

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS-----FVG 323
              G      E+ +RM       D+ +W  M++   +N    ++ +LF  M        G
Sbjct: 220 AFNGHLRYTREIFQRMPER----DLISWATMVAALVENDLLEESKELFDRMPRHCALSKG 275

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           + PN VT  + + AC+ L ALA G +IH+   + GF  D++V N+L+N Y +C  L  A+
Sbjct: 276 MTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRCGALGDAK 335

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM-QESDVPPNVITWNVLISGYIQN 442
            VFD ++ +DV SW+SMI+ + Q G   +A EL+ +M  E  +P ++I  +VL +    +
Sbjct: 336 IVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACS-NS 394

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G  + + D F+ +  + +V+     +  ++    + G+  +A  + R M    F+P  + 
Sbjct: 395 GVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMP---FHPGPLL 451

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
            +++L AC       + +     V     E+S P + +L + Y+ +
Sbjct: 452 YMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYI-TLANIYSAA 496



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 175/380 (46%), Gaps = 62/380 (16%)

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           M+ +   +E A ++FD I D+D +SW  M++ Y ++G    A  +F +M       ++ +
Sbjct: 1   MFGRLGCVERARQIFDAIADRDSFSWGIMLSIYARSGDLSNAKGVFDRMPRW----SLGS 56

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKV--------------------------KRNT 465
           W  L+S +  +G+ +EA  LF  M + D +                          +R+ 
Sbjct: 57  WTALLSAFALSGHHEEAKTLFDTMQERDLIAWTIMLTVLATFSNIEDAKYHFDQMPERDL 116

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE---- 521
            +W +++A   + GQ  NA   F +M     + +  ++LS       + A+ +V +    
Sbjct: 117 VAWTAMLAANAERGQMENARETFDQMPERNLF-SWTSLLSAYGRSGDVKAAGRVFDSMPE 175

Query: 522 --------------IHGCVLR--RSLES----SLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
                         + G V+R  R+ +S     L    +++  YA +G++ Y+R IF  M
Sbjct: 176 WNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRM 235

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMK-----SFGLKPNRGTFLSIILAHSLAGM 616
             +D+I+W +++   V +     + +LFD+M      S G+ PNR TF++++ A S  G 
Sbjct: 236 PERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGA 295

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           +  G+K+  ++ E      ++   +A+++ YGR G L +A + + D     D   W +++
Sbjct: 296 LAEGRKIHAAVAERGFDTDLVVS-NALVNFYGRCGALGDA-KIVFDGMRRRDVISWSSMI 353

Query: 677 TACRIHGNIDLAVLAIERLF 696
           +A    G +D A+    R+ 
Sbjct: 354 SAFAQRGRVDEAMELYHRML 373



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 157/334 (47%), Gaps = 17/334 (5%)

Query: 70  SNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMI 129
           S S  + R   AF + + E D+   T +LS YA  G L   RE+F+ M ER+L +W+ M+
Sbjct: 189 SLSGDVVRAKRAF-DSMPERDLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMV 247

Query: 130 GAYSRDQRWREVVELFFLM-----VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
            A   +    E  ELF  M     +  G+ P+   F  +L AC   G    G+ +H+ V 
Sbjct: 248 AALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVA 307

Query: 185 KLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHR 244
           + G      V N+++  Y +CG L  A+  F+ M  +D ++W+SMIS + Q G  DEA  
Sbjct: 308 ERGFDTDLVVSNALVNFYGRCGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAME 367

Query: 245 LFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGF 303
           L+ +M  E      + F  ++ + +  G  + + +  + +     + P +  + CM+   
Sbjct: 368 LYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVL 427

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
            + G+   A DL + M F    P  +   + +SAC     L   +E    A ++ F  D 
Sbjct: 428 GRAGKLRDAEDLLRLMPF---HPGPLLYMTMLSACK----LYTDVERGEAAAEVVFELDP 480

Query: 364 LVGN---SLINMYSKCEELEAAERVFDMIKDKDV 394
              +   +L N+YS  +  + A R+  +++++ +
Sbjct: 481 ENSSPYITLANIYSAAKRPKDAARIRKLMEERGI 514


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 217/647 (33%), Positives = 328/647 (50%), Gaps = 73/647 (11%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           +VF W  +I G++ +     +L LF  M + GV PN  T      +CT  KA   G ++H
Sbjct: 95  NVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLH 154

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEE-------------------------------LE 380
           + A+K+    +  V  S+I+MY+   E                               L+
Sbjct: 155 AHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLD 214

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS--G 438
            A R+FD I  KDV SWN+MI+GY Q+G   +A   F +MQE++V PN  T  V++S  G
Sbjct: 215 DARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACG 274

Query: 439 YIQNGN--------------------EDEAVDLFQRMGKNDKVK--------RNTASWNS 470
           + ++G                      +  +D++ + G+ D  +        ++  SWN+
Sbjct: 275 HTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNT 334

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV---L 527
           +I GY  L     AL +F  M  S   PN VT L +L ACA L A +  K +H  +   L
Sbjct: 335 MIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNL 394

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           R S  +SL    SLID YAK G I  +  +F  M S+++ +WN+++ G+ +HG    AL 
Sbjct: 395 RNSSNASL--WTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALA 452

Query: 588 LFDQMKSFGL-KPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
           LF +M + GL +P+  TF+ ++ A + AG+VDLG + F S+ + Y I P ++HY  MIDL
Sbjct: 453 LFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDL 512

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
             R+ K EEA   +++M +EPD +IW +LL+AC+ HG ++      ERLF LEP +    
Sbjct: 513 LARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAF 572

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
            L+  IYA  G+ +D  ++R    +   +   G   IE+   V+ F+ G       + +Y
Sbjct: 573 VLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIY 632

Query: 767 SWLQNVPE-----NVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRI 821
             L  V +          +S     ++EE KE     HSEKLA++F LI +     TIRI
Sbjct: 633 KMLNEVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGT-TIRI 691

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           VKN+R+C +CH   K +S + + EI   D    HHFK+G CSC D W
Sbjct: 692 VKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 162/612 (26%), Positives = 271/612 (44%), Gaps = 99/612 (16%)

Query: 55  VRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VFVKTKLLSVYA--KCGCLDDA 110
           + ++ Y+NLL+ C + N+    +++H+ + + T ++  VFV++KL+   A    G L  A
Sbjct: 26  LEQHPYLNLLEKCKNINTF---KQIHSLI-IKTGLNNTVFVQSKLIHFCAVSPSGDLSYA 81

Query: 111 REVFEDMRER---NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC 167
             +FE+ ++    N++ W+++I  YS        + LF  M+  G+ P+   FP + ++C
Sbjct: 82  LSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSC 141

Query: 168 GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
                   GK +H+  +KL +     V  SV+ +Y   G++ +AR  F+    +D V++ 
Sbjct: 142 TKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFT 201

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
           ++I+GY   G  D+A RLFD++  ++    VV++N +I  Y Q G               
Sbjct: 202 ALITGYVSQGCLDDARRLFDEIPVKD----VVSWNAMISGYVQSG--------------- 242

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
                               R  +A+  F EM    V+PN  T+   +SAC   ++  +G
Sbjct: 243 --------------------RFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELG 282

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
             I S     GF  ++ + N+LI+MY KC E + A  +FD I++KDV SWN+MI GY   
Sbjct: 283 KWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYL 342

Query: 408 GYCGKAYELFIKMQESDVPPNVIT------------------------------------ 431
               +A  LF  M  S+V PN +T                                    
Sbjct: 343 SLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASL 402

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           W  LI  Y + G  + A  +F+ M       RN ASWN++++G+   G    AL +F +M
Sbjct: 403 WTSLIDMYAKCGCIEAAERVFRSMH-----SRNLASWNAMLSGFAMHGHAERALALFSEM 457

Query: 492 -QSSCFYPNCVTILSVLPAC--AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
                F P+ +T + VL AC  A LV     +     +    +   L     +ID  A++
Sbjct: 458 VNKGLFRPDDITFVGVLSACTQAGLVDLGH-QYFRSMIQDYGISPKLQHYGCMIDLLARA 516

Query: 549 GNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLS 606
                +  +   M    D   W SL+     HG        +   + F L+P N G F+ 
Sbjct: 517 EKFEEAEILMKNMEMEPDGAIWGSLLSACKAHG--RVEFGEYVAERLFQLEPENAGAFVL 574

Query: 607 IILAHSLAGMVD 618
           +   ++ AG  D
Sbjct: 575 LSNIYAGAGRWD 586



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 130/534 (24%), Positives = 230/534 (43%), Gaps = 82/534 (15%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKC------ 104
           G +   +T+  L ++C  + + H  ++LHA  L L    +  V T ++ +YA        
Sbjct: 126 GVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFA 185

Query: 105 -------------------------GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
                                    GCLDDAR +F+++  +++ +W+AMI  Y +  R+ 
Sbjct: 186 RLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFE 245

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E +  F+ M +  + P+      +L ACG+    E GK + S V   G     ++ N+++
Sbjct: 246 EAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALI 305

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +Y KCG+   AR  F+ ++EKD ++WN+MI GY  +   +EA  LF+ M R  +K   V
Sbjct: 306 DMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDV 365

Query: 260 TFNILIRSYNQLGQCDVA--------------------------------MEMVKRMESL 287
           TF  ++ +   LG  D+                                 +E  +R+   
Sbjct: 366 TFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRS 425

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM-PNGVTITSAISACTDLKALAM 346
             + ++ +W  M+SGFA +G   +AL LF EM   G+  P+ +T    +SACT    + +
Sbjct: 426 MHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDL 485

Query: 347 GME-IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWNSMIAGY 404
           G +   S+    G +  +     +I++ ++ E+ E AE +  +M  + D   W S+++  
Sbjct: 486 GHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSA- 544

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
           C+A    +  E   +      P N   + +L + Y   G  D+   +  R+  NDK  + 
Sbjct: 545 CKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTRL--NDKGMKK 602

Query: 465 TASWNSL-IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASN 517
                S+ I G            V   +    F+P C  I  +L     L+  N
Sbjct: 603 VPGCTSIEIDG-----------DVHEFLVGDKFHPECNNIYKMLNEVDKLLEEN 645



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 159/308 (51%), Gaps = 7/308 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           +GR  EAI     +        ++T + +L AC  + S  L + + +++ +     ++ +
Sbjct: 241 SGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQL 300

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y KCG  D ARE+F+ + E+++ +W+ MIG YS    + E + LF +M++  +
Sbjct: 301 TNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNV 360

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIK-LGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            P+D  F  IL AC   G  + GK +H+ + K L  S    +  S++ +Y KCG +  A 
Sbjct: 361 KPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAE 420

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI-KLGVVTFNILIRSYNQL 271
           R F SM  ++  +WN+M+SG+   G  + A  LF +M  + + +   +TF  ++ +  Q 
Sbjct: 421 RVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQA 480

Query: 272 GQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  D+  +  + M +  GI+P +  + CMI   A+  +  +A  L K M    + P+G  
Sbjct: 481 GLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNME---MEPDGAI 537

Query: 331 ITSAISAC 338
             S +SAC
Sbjct: 538 WGSLLSAC 545



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 11/217 (5%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVFVKTKL 97
           EA+ + + +     K    T++ +L AC    ++ L + +HA++  NL    +  + T L
Sbjct: 347 EALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSL 406

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF-PD 156
           + +YAKCGC++ A  VF  M  RNL +W+AM+  ++        + LF  MV  GLF PD
Sbjct: 407 IDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPD 466

Query: 157 DFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D  F  +L AC   G  + G +   S++   G+S   +    ++ +  +  K   A    
Sbjct: 467 DITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILM 526

Query: 216 ESMD-EKDGVAWNSMIS-----GYFQIGENDEAHRLF 246
           ++M+ E DG  W S++S     G  + GE   A RLF
Sbjct: 527 KNMEMEPDGAIWGSLLSACKAHGRVEFGEY-VAERLF 562


>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
 gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
          Length = 771

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 219/779 (28%), Positives = 379/779 (48%), Gaps = 87/779 (11%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           F + ++AC         K++H  + +      RR+ N ++ ++ KCG    AR  F  + 
Sbjct: 10  FEERIRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVR 69

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
             +  +W+ +I  Y       +A  LFD M          T+NI+I +Y ++ + D A E
Sbjct: 70  LPNEYSWSCIIQAYVSSSRIHDARALFDSMP----GFDAFTWNIMIAAYARINRLDDARE 125

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           +   M S     DV +W  +++G+A++ R  +A  LF+ M     + + VT TS +    
Sbjct: 126 LFHGMIS---GRDVVSWAILVAGYARHDRLEEASALFRRMP----LWDTVTCTSVLQGYA 178

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
               LA   E+       G   D    N++I  Y K   ++ AE +F  IK ++  SW+ 
Sbjct: 179 HNGHLAEAQELFDRIGGAG-DRDATACNAMIAAYGKNARVDLAEGLFAQIKLRNAASWSL 237

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDV---------------------------PPNVITW 432
           ++  Y Q G+   A + F +M + D                              +VI W
Sbjct: 238 LLLTYAQNGHLDLAKKSFDRMPQRDSIAFTAMTAVLSDQGELRGAREMLRYLSAVDVIAW 297

Query: 433 NVLISGYIQNGNEDEA---------------------VDLFQRMGKNDKVKR-------- 463
           N L+ GY + G+ DE                      V+L+ + G+ D  +R        
Sbjct: 298 NALLEGYSRTGDLDEVRRLFSAMEHRTVATTVVAGTLVNLYGKCGRVDDARRVLDAMPVR 357

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
            + SW ++IA Y Q G    A+ +F+ M      P+ +T++SV+ +CA L   +  K IH
Sbjct: 358 TSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIH 417

Query: 524 GCVLRRSLES-SLPVMNSLIDTYAKSGNIVYSRTIFDG--MSSKDIITWNSLICGYVLHG 580
             +    L S SL ++N++I  Y K GN+  +R +F+   + ++ ++TW ++I  Y  +G
Sbjct: 418 ARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNG 477

Query: 581 FWHAALDLFDQMK-SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
               A++LF +M    G +PNR TFLS++ A S  G ++   + FCS+   + + P  +H
Sbjct: 478 VGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDH 537

Query: 640 YSAMIDLYGRSGKLEEAMEFI-EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
           Y  ++DL GR+G+L EA + +      E D   W A L+AC+++G+++ +  A +R+ +L
Sbjct: 538 YCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRVSEL 597

Query: 699 EPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS 758
           EP +V  + L+  +YA  G+  D  ++R   + +  +   G+ WIE+ N V+ F+    S
Sbjct: 598 EPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVSDVS 657

Query: 759 ESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFAL 809
                 +YS L+ +   +      +G           ++EE+K ++ G HSE+LA+A  +
Sbjct: 658 HPRKLEIYSELERLHREI----KEAGYVPDTKMVLRDVDEEKKAQLLGYHSERLAMALGI 713

Query: 810 IGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           I S+    T+R+VKN+R+C  CH   K++S +   +I + D+   HHFK+G CSCGDYW
Sbjct: 714 I-STPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 771



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 204/456 (44%), Gaps = 50/456 (10%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           T  ++LQ    +  +  A++L   +    + D      +++ Y K   +D A  +F  ++
Sbjct: 169 TCTSVLQGYAHNGHLAEAQELFDRIGGAGDRDATACNAMIAAYGKNARVDLAEGLFAQIK 228

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
            RN  +WS ++  Y+++       + F  M Q     D   F                  
Sbjct: 229 LRNAASWSLLLLTYAQNGHLDLAKKSFDRMPQR----DSIAF------------------ 266

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
                             ++ AV    G+L  AR     +   D +AWN+++ GY + G+
Sbjct: 267 -----------------TAMTAVLSDQGELRGAREMLRYLSAVDVIAWNALLEGYSRTGD 309

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
            DE  RLF  M    +   VV    L+  Y + G+ D A  +   ++++ +   V +WT 
Sbjct: 310 LDEVRRLFSAMEHRTVATTVVA-GTLVNLYGKCGRVDDARRV---LDAMPVRTSV-SWTA 364

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS-LAVKM 357
           MI+ +AQNG  ++A++LF+ M   G  P+ +T+ S + +C  L  L++G  IH+ +    
Sbjct: 365 MIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHARIRSSP 424

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMI--KDKDVYSWNSMIAGYCQAGYCGKAYE 415
            F+  +++ N++I MY KC  LE A  VF+ +  + + V +W +MI  Y Q G   +A E
Sbjct: 425 LFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNGVGEEAIE 484

Query: 416 LFIKMQ-ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
           LF +M  +    PN +T+  ++S     G  ++A + F  MG +  V      +  L+  
Sbjct: 485 LFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVPPAGDHYCCLVDL 544

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             + G+   A  +  + +   F  + V  ++ L AC
Sbjct: 545 LGRAGRLGEAEKLLLRHKD--FEADVVCWIAFLSAC 578



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 133/522 (25%), Positives = 215/522 (41%), Gaps = 95/522 (18%)

Query: 64  LQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLL-SVYAKCGCLDDAREVFEDMRERNL 122
           ++AC     +H A+ LH  +      D    T LL  ++ KCG  D AR VF  +R  N 
Sbjct: 14  IRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNE 73

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHS 181
           Y+WS +I AY    R  +   LF  M   G   D F +  ++ A        +A +L H 
Sbjct: 74  YSWSCIIQAYVSSSRIHDARALFDSM--PGF--DAFTWNIMIAAYARINRLDDARELFHG 129

Query: 182 LV--------------------IKLGMSCVRRVR-------NSVLAVYVKCGKLIWARRF 214
           ++                    ++   +  RR+         SVL  Y   G L  A+  
Sbjct: 130 MISGRDVVSWAILVAGYARHDRLEEASALFRRMPLWDTVTCTSVLQGYAHNGHLAEAQEL 189

Query: 215 FESM---DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL-GVVTFNILIRSYNQ 270
           F+ +    ++D  A N+MI+ Y +    D A  LF      +IKL    ++++L+ +Y Q
Sbjct: 190 FDRIGGAGDRDATACNAMIAAYGKNARVDLAEGLF-----AQIKLRNAASWSLLLLTYAQ 244

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G  D+A +   RM       D   +T M +  +  G    A ++ + +S V V+     
Sbjct: 245 NGHLDLAKKSFDRMPQ----RDSIAFTAMTAVLSDQGELRGAREMLRYLSAVDVIAWNAL 300

Query: 331 IT--SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
           +   S      +++ L   ME  ++A         +V  +L+N+Y KC  ++ A RV D 
Sbjct: 301 LEGYSRTGDLDEVRRLFSAMEHRTVAT-------TVVAGTLVNLYGKCGRVDDARRVLDA 353

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT----------------- 431
           +  +   SW +MIA Y Q G   +A  LF  M      P+ IT                 
Sbjct: 354 MPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLG 413

Query: 432 -------------------WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                               N +I+ Y + GN + A ++F+ +       R+  +W ++I
Sbjct: 414 KRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLR---TRSVVTWTAMI 470

Query: 473 AGYQQLGQKNNALGVFRKMQ-SSCFYPNCVTILSVLPACAYL 513
             Y Q G    A+ +F++M       PN VT LSVL AC++L
Sbjct: 471 RAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHL 512



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 148/326 (45%), Gaps = 16/326 (4%)

Query: 3   IWILTTFQQLHSLLTKKSNPRF--RDT-----HLDFLCGNGRLNEAITVLDSIATQGAKV 55
           + +LT  Q  H  L KKS  R   RD+         L   G L  A  +L  ++     V
Sbjct: 237 LLLLTYAQNGHLDLAKKSFDRMPQRDSIAFTAMTAVLSDQGELRGAREMLRYLSA----V 292

Query: 56  RRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
               +  LL+    +  +   R+L + +   T     V   L+++Y KCG +DDAR V +
Sbjct: 293 DVIAWNALLEGYSRTGDLDEVRRLFSAMEHRTVATTVVAGTLVNLYGKCGRVDDARRVLD 352

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            M  R   +W+AMI AY+++    E + LF  M  +G  P D     ++ +C   G    
Sbjct: 353 AMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSL 412

Query: 176 GKLMHSLVIKLGM-SCVRRVRNSVLAVYVKCGKLIWARRFFES--MDEKDGVAWNSMISG 232
           GK +H+ +    + S    + N+V+ +Y KCG L  AR  FES  +  +  V W +MI  
Sbjct: 413 GKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRA 472

Query: 233 YFQIGENDEAHRLFDKMCRE-EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGIT 290
           Y Q G  +EA  LF +M  +   +   VTF  ++ + + LGQ + A E    M    G+ 
Sbjct: 473 YAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSMGPDFGVP 532

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLF 316
           P    + C++    + GR  +A  L 
Sbjct: 533 PAGDHYCCLVDLLGRAGRLGEAEKLL 558


>gi|449481169|ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score =  330 bits (845), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 199/618 (32%), Positives = 320/618 (51%), Gaps = 59/618 (9%)

Query: 265 IRSYNQLGQCDVAMEMVK-------RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           I SY  + Q    + M+K        M   G+ P     + M++ +A +G    ++ +F 
Sbjct: 70  ILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFN 129

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
            +       +  T    + +  +L ++ MG  +H L +++G   D+ V  SLI +Y KC 
Sbjct: 130 GIG------DYFTFPFVLKSSVELLSVWMGKCVHGLILRIGLQFDLYVATSLIILYGKCG 183

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           E+  A +VFD +  +DV SWN+++AGY ++G    A  +F +M       N+++W  +IS
Sbjct: 184 EINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMPWR----NIVSWTTMIS 239

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
           GY Q+G   +A+ LF  M K D   R                                  
Sbjct: 240 GYSQSGLAQQALSLFDEMVKEDSGVR---------------------------------- 265

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           PN VTI+SVLPACA L    + ++IH    R  L S+  V+ +L   YAK G++V +R  
Sbjct: 266 PNWVTIMSVLPACAQLSTLERGRQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNC 325

Query: 558 FDGM--SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
           FD +  + K++I WN++I  Y  +G    A+  F +M   G++P+  TF  ++   S +G
Sbjct: 326 FDKLNRNEKNLIAWNTMITAYASYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSG 385

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
           +VD+G K F  ++  Y I P +EHY+ + DL GR+G+L EA + + +MP+    SIW +L
Sbjct: 386 LVDVGLKYFNHMSTTYSINPRVEHYACVADLLGRAGRLAEASKLVGEMPMPAGPSIWGSL 445

Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
           L ACR H N+++A  A  +LF LEP +     L+  +YA  G+ ++  K+R + +    +
Sbjct: 446 LAACRKHRNLEMAETAARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQGTK 505

Query: 736 NSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTAR-----SSHSGLCIEEE 790
            S G  WIE+    + F+ G  S      +Y +L+ +PE + A      +S+    I EE
Sbjct: 506 KSPGCSWIEINGKAHMFLGGDTSHPQGKEIYMFLEALPEKMKAAGYFPDTSYVLHDISEE 565

Query: 791 EKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLAD 850
           EKE     HSEKLA+AF ++ ++ A   +R+ KN+R+C  CH    ++S ++  E+ + D
Sbjct: 566 EKEFNLIAHSEKLAVAFGIL-NTPAETVLRVTKNLRICGDCHTAMVFISEIYGREVIVRD 624

Query: 851 SKCLHHFKNGQCSCGDYW 868
               HHFK G CSCGDYW
Sbjct: 625 INRFHHFKGGCCSCGDYW 642



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 178/402 (44%), Gaps = 81/402 (20%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           +Y  + Q     N + L  ++HA + L   +    V +K+++ YA  G +D +  VF   
Sbjct: 72  SYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNG- 130

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
                      IG Y                         F FP +L++         GK
Sbjct: 131 -----------IGDY-------------------------FTFPFVLKSSVELLSVWMGK 154

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H L++++G+     V  S++ +Y KCG++  A + F++M  +D  +WN++++GY + G
Sbjct: 155 CVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSG 214

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
             D A  +F++M    I    V++  +I  Y+Q                           
Sbjct: 215 CIDAALAIFERMPWRNI----VSWTTMISGYSQ--------------------------- 243

Query: 298 CMISGFAQNGRTSQALDLFKEM--SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
              SG AQ     QAL LF EM     GV PN VTI S + AC  L  L  G +IH LA 
Sbjct: 244 ---SGLAQ-----QALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELAC 295

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI--KDKDVYSWNSMIAGYCQAGYCGKA 413
           +MG   +  V  +L  MY+KC  L  A   FD +   +K++ +WN+MI  Y   G+  +A
Sbjct: 296 RMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQA 355

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
              F +M ++ + P+ IT+  L+SG   +G  D  +  F  M
Sbjct: 356 VSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHM 397



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 188/402 (46%), Gaps = 53/402 (13%)

Query: 31  FLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEI 89
           F   +G ++ +++V + I          T+  +L++ ++  S+ + + +H   L +  + 
Sbjct: 114 FYASSGDIDSSVSVFNGIGDY------FTFPFVLKSSVELLSVWMGKCVHGLILRIGLQF 167

Query: 90  DVFVKTKLLSVYAKC-------------------------------GCLDDAREVFEDMR 118
           D++V T L+ +Y KC                               GC+D A  +FE M 
Sbjct: 168 DLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAALAIFERMP 227

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD--GLFPDDFLFPKILQACGNCGDFEAG 176
            RN+ +W+ MI  YS+    ++ + LF  MV++  G+ P+      +L AC      E G
Sbjct: 228 WRNIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERG 287

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM--DEKDGVAWNSMISGYF 234
           + +H L  ++G++    V  ++ A+Y KCG L+ AR  F+ +  +EK+ +AWN+MI+ Y 
Sbjct: 288 RQIHELACRMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYA 347

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDV 293
             G   +A   F +M +  I+   +TF  L+   +  G  DV ++    M +   I P V
Sbjct: 348 SYGHGLQAVSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRV 407

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI-TSAISACTDLKALAMGMEIHS 352
             + C+     + GR ++A  L  EM     MP G +I  S ++AC   + L M     +
Sbjct: 408 EHYACVADLLGRAGRLAEASKLVGEMP----MPAGPSIWGSLLAACRKHRNLEMA---ET 460

Query: 353 LAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDMIKDK 392
            A K+   +    GN ++  NMY++    +  +++  ++K +
Sbjct: 461 AARKLFVLEPENTGNYVLLSNMYAEAGRWQEVDKLRAIVKSQ 502


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  329 bits (844), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 207/619 (33%), Positives = 319/619 (51%), Gaps = 51/619 (8%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P  FT   +I G+       QA+  ++ M   G+ P+  T  S   +C     L  G ++
Sbjct: 103 PTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG---VLCEGKQL 159

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H  + K+GF  D  + N+L+NMYS C  L +A +VFD + +K V SW +MI  Y Q    
Sbjct: 160 HCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLP 219

Query: 411 GKAYELFIKMQESDVPPNVITW-----------------------------------NVL 435
            +A +LF +M+ + V PN IT                                    + L
Sbjct: 220 HEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSAL 279

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           +  Y + G    A DLF +M +     +N   WN +I G+ +      AL +F +MQ S 
Sbjct: 280 MDVYCKCGCYPLARDLFNKMPE-----KNLFCWNIMINGHVEDSDYEEALSLFNEMQLSG 334

Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
              + VT+ S+L AC +L A    K +H  + +  +E  + +  +L+D YAK G+I  + 
Sbjct: 335 VKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAM 394

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            +F  M  KD++TW +LI G  + G    AL+LF +M+   +KP+  TF+ ++ A S AG
Sbjct: 395 RVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAG 454

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
           +V+ G   F S+   Y I P IEHY  M+D+ GR+G++ EA + I++MP+ PD  +   L
Sbjct: 455 LVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGL 514

Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
           L+ACRIHGN+ +A  A ++L +L+P +     L+  IY+     E A K+R+L  E   +
Sbjct: 515 LSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIK 574

Query: 736 NSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTAR-----SSHSGLCIEEE 790
              G   IEV  +V+ FV G  S   S  +Y  L ++   + +       S     ++E+
Sbjct: 575 KPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEK 634

Query: 791 EKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
           EKE    +HSEKLA+AF L+  S  P T IR+VKN+R+C  CH   K++S +++ EI + 
Sbjct: 635 EKENELSLHSEKLAIAFGLL--STTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVR 692

Query: 850 DSKCLHHFKNGQCSCGDYW 868
           D    HHF  G CSC D+W
Sbjct: 693 DRNRFHHFTKGSCSCRDFW 711



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 224/468 (47%), Gaps = 40/468 (8%)

Query: 77  RKLHA-FLNLVTEIDVFVKTKLLSVYA--KCGCLDDAREVFEDMRERNLYTWSAMIGAYS 133
           +++HA  L     +D F  +K+++  A    G L  AR VF  +     +T +++I  Y+
Sbjct: 57  KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYT 116

Query: 134 RDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR 193
                R+ +  + LM+  GL PD F FP + ++CG   +   GK +H    KLG +    
Sbjct: 117 NKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAY 173

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
           ++N+++ +Y  CG L+ AR+ F+ M  K  V+W +MI  Y Q     EA +LF +M    
Sbjct: 174 IQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIAS 233

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI------------------------ 289
           +K   +T   ++ +  +    + A ++ K ++  GI                        
Sbjct: 234 VKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLAR 293

Query: 290 -------TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
                    ++F W  MI+G  ++    +AL LF EM   GV  + VT+ S + ACT L 
Sbjct: 294 DLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLG 353

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           AL +G  +H    K     DV +G +L++MY+KC  +E+A RVF  + +KDV +W ++I 
Sbjct: 354 ALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIV 413

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
           G    G   KA ELF +MQ S+V P+ IT+  +++     G  +E +  F  M     ++
Sbjct: 414 GLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQ 473

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            +   +  ++    + G+   A  + + M  +   P+   ++ +L AC
Sbjct: 474 PSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMA---PDYFVLVGLLSAC 518



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 174/362 (48%), Gaps = 14/362 (3%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTKL 97
           +EAI +   +     K    T +N+L AC  S  +  A+++H +++         + + L
Sbjct: 220 HEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSAL 279

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           + VY KCGC   AR++F  M E+NL+ W+ MI  +  D  + E + LF  M   G+  D 
Sbjct: 280 MDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDK 339

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
                +L AC + G  E GK +H  + K  +     +  +++ +Y KCG +  A R F+ 
Sbjct: 340 VTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQE 399

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
           M EKD + W ++I G    G+  +A  LF +M   E+K   +TF  ++ + +  G  +  
Sbjct: 400 MPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEG 459

Query: 278 MEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
           +     M +  GI P +  + CM+    + GR ++A DL + M      P+   +   +S
Sbjct: 460 IAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMA---PDYFVLVGLLS 516

Query: 337 ACTDLKALAM----GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           AC     L +      ++  L  K G T  +L      N+YS  +  EAA+++ +++ ++
Sbjct: 517 ACRIHGNLVVAERAAQQLIELDPKNGGTYVLLS-----NIYSSMKNWEAAKKMRELMVER 571

Query: 393 DV 394
           ++
Sbjct: 572 NI 573



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 181/389 (46%), Gaps = 47/389 (12%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLL 98
           +AI     +  QG    R T+ +L ++C     +   ++LH     L    D +++  L+
Sbjct: 123 QAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLM 179

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
           ++Y+ CGCL  AR+VF+ M  +++ +W+ MIGAY++     E ++LF  M    + P++ 
Sbjct: 180 NMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEI 239

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
               +L AC    D E  K +H  + + G+     + ++++ VY KCG    AR  F  M
Sbjct: 240 TLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKM 299

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------C---------- 250
            EK+   WN MI+G+ +  + +EA  LF++M                  C          
Sbjct: 300 PEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGK 359

Query: 251 -------REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
                  +E+I++ V     L+  Y + G  + AM + + M       DV TWT +I G 
Sbjct: 360 WLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPE----KDVMTWTALIVGL 415

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFTDD 362
           A  G+  +AL+LF EM    V P+ +T    ++AC+    +  G+   +S+  K G    
Sbjct: 416 AMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPS 475

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKD 391
           +     +++M  +   +  AE   D+I++
Sbjct: 476 IEHYGCMVDMLGRAGRIAEAE---DLIQN 501



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 73/310 (23%), Positives = 134/310 (43%), Gaps = 41/310 (13%)

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           + R+  N      T + NS+I GY        A+  ++ M      P+  T  S+  +C 
Sbjct: 92  YARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG 151

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
            L      K++H    +    S   + N+L++ Y+  G +V +R +FD M +K +++W +
Sbjct: 152 VLCEG---KQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWAT 208

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE-- 629
           +I  Y      H A+ LF +M+   +KPN  T ++++ A + +  ++  K+V   I E  
Sbjct: 209 MIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETG 268

Query: 630 -------------------CYQII-----PMIEH----YSAMIDLYGRSGKLEEAMEFIE 661
                              CY +       M E     ++ MI+ +      EEA+    
Sbjct: 269 IGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFN 328

Query: 662 DMP---IEPDSSIWEALLTACRIHGNIDLAV---LAIERLFDLEPGDVLIQRLILQIYAI 715
           +M    ++ D     +LL AC   G ++L     + IE+  +    DV +   ++ +YA 
Sbjct: 329 EMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEK--EKIEVDVALGTALVDMYAK 386

Query: 716 CGKPEDALKV 725
           CG  E A++V
Sbjct: 387 CGSIESAMRV 396



 Score = 47.0 bits (110), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 97/219 (44%), Gaps = 15/219 (6%)

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAK---SGNIVYSRTIFDGMSSKDIITWNSLI 573
           +++K+IH  +LR  L    P   S I  +     SG++ Y+R +F+ + +    T NS+I
Sbjct: 54  SQLKQIHAQMLRTCLFVD-PFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSII 112

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQ 632
            GY        A+  +  M   GL P+R TF S+  +    G++  GK++ C  T+  + 
Sbjct: 113 RGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKS---CGVLCEGKQLHCHSTKLGFA 169

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAI 692
               I+  + ++++Y   G L  A +  + M +      W  ++ A   +   DL   AI
Sbjct: 170 SDAYIQ--NTLMNMYSNCGCLVSARKVFDKM-VNKSVVSWATMIGA---YAQWDLPHEAI 223

Query: 693 ERLFDLEPGDVLIQRLIL-QIYAICGKPEDALKVRKLER 730
           +    +E   V    + L  +   C +  D    +++ +
Sbjct: 224 KLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHK 262


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  329 bits (843), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 230/771 (29%), Positives = 385/771 (49%), Gaps = 80/771 (10%)

Query: 112 EVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG 171
           +VF++M +R  + W+ MIGAY  +      + L++ M  +G+      FP +L+AC    
Sbjct: 100 KVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR 159

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK-DGVAWNSMI 230
           D  +G  +HSL++KLG      + N+++++Y K   L  ARR F+   EK D V WNS++
Sbjct: 160 DIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSIL 219

Query: 231 SGYFQIGENDEAHRLFDKM--------------------------CREEIKLGVVTF--- 261
           S Y   G++ E   LF +M                            +EI   V+     
Sbjct: 220 SSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 279

Query: 262 -------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
                  N LI  Y + G+   A  ++++M +     DV TW  +I G+ QN    +AL+
Sbjct: 280 SSELYVCNALIAMYTRCGKMPQAERILRQMNN----ADVVTWNSLIKGYVQNLMYKEALE 335

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
            F +M   G   + V++TS I+A   L  L  GME+H+  +K G+  ++ VGN+LI+MYS
Sbjct: 336 FFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYS 395

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK--------------- 419
           KC       R F  + DKD+ SW ++IAGY Q     +A ELF                 
Sbjct: 396 KCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGS 455

Query: 420 -MQESDVPPNV-----ITWNVLISGYIQNGNEDEAVDLFQR---MGKNDKV-----KRNT 465
            ++ S V  ++     I  ++L  G +    ++E VD++ +   MG   +V      ++ 
Sbjct: 456 ILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDV 515

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
            SW S+I+     G ++ A+ +FR+M  +    + V +L +L A A L A NK +EIH  
Sbjct: 516 VSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCY 575

Query: 526 VLRRS--LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
           +LR+   LE S+ V  +++D YA  G++  ++ +FD +  K ++ + S+I  Y +HG   
Sbjct: 576 LLRKGFCLEGSIAV--AVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGK 633

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
           AA++LFD+M+   + P+  +FL+++ A S AG++D G+     +   Y++ P  EHY  +
Sbjct: 634 AAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCL 693

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           +D+ GR+  + EA EF++ M  EP + +W ALL ACR H   ++  +A +RL +LEP + 
Sbjct: 694 VDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNP 753

Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
               L+  ++A  G+  D  KVR   + +      G  WIE+   V+ F     S   S 
Sbjct: 754 GNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESK 813

Query: 764 LLYSWLQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLALAFA 808
            +Y  L  V   +     +          ++E EK ++   HSE++A+A+ 
Sbjct: 814 EIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYG 864



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 144/551 (26%), Positives = 247/551 (44%), Gaps = 65/551 (11%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-N 84
           +T +     NG    A+ +  ++  +G  +  +++  LL+AC     I    +LH+ L  
Sbjct: 114 NTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVK 173

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER-NLYTWSAMIGAYSRDQRWREVVE 143
           L      F+   L+S+YAK   L  AR +F+  +E+ +   W++++ +YS   +  E +E
Sbjct: 174 LGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLE 233

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM-SCVRRVRNSVLAVY 202
           LF  M   G  P+ +     L AC      + GK +H+ V+K    S    V N+++A+Y
Sbjct: 234 LFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMY 293

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
            +CGK+  A R    M+  D V WNS+I GY Q     EA   F  M     K   V+  
Sbjct: 294 TRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMT 353

Query: 263 ILIRSYNQLGQCDVAME-------------------MVKRMESLGIT------------P 291
            +I +  +L      ME                   ++       +T             
Sbjct: 354 SIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK 413

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           D+ +WT +I+G+AQN    +AL+LF++++   +  + + + S + A + LK++ +  EIH
Sbjct: 414 DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH 473

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
              ++ G  D V + N L+++Y KC  +  A RVF+ IK KDV SW SMI+     G   
Sbjct: 474 CHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNES 532

Query: 412 KAYELFIKMQESDVPPNVITW---------------------NVLISGYIQNGNEDEAV- 449
           +A ELF +M E+ +  + +                        +L  G+   G+   AV 
Sbjct: 533 EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 592

Query: 450 -------DLFQRMGKNDKVKRNT-ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
                  DL       D+++R     + S+I  Y   G    A+ +F KM+     P+ +
Sbjct: 593 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHI 652

Query: 502 TILSVLPACAY 512
           + L++L AC++
Sbjct: 653 SFLALLYACSH 663



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 142/561 (25%), Positives = 259/561 (46%), Gaps = 43/561 (7%)

Query: 6   LTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQ 65
           L+  ++L     +K +    ++ L     +G+  E + +   +   G      T ++ L 
Sbjct: 196 LSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALT 255

Query: 66  ACIDSNSIHLARKLHAFL--NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLY 123
           AC   +   L +++HA +  +     +++V   L+++Y +CG +  A  +   M   ++ 
Sbjct: 256 ACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVV 315

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
           TW+++I  Y ++  ++E +E F  M+  G   D+     I+ A G   +  AG  +H+ V
Sbjct: 316 TWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYV 375

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
           IK G     +V N+++ +Y KC    +  R F  M +KD ++W ++I+GY Q   + EA 
Sbjct: 376 IKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEAL 435

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQL-------------------------------G 272
            LF  + ++ +++  +    ++R+ + L                               G
Sbjct: 436 ELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYG 495

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
           +C       +  ES+    DV +WT MIS  A NG  S+A++LF+ M   G+  + V + 
Sbjct: 496 KCRNMGYATRVFESIK-GKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALL 554

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
             +SA   L AL  G EIH   ++ GF  +  +  ++++MY+ C +L++A+ VFD I+ K
Sbjct: 555 CILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERK 614

Query: 393 DVYSWNSMIAGYCQAGYCGK-AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
            +  + SMI  Y   G CGK A ELF KM+  +V P+ I++  L+      G  DE    
Sbjct: 615 GLLQYTSMINAYGMHG-CGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGF 673

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
            + M    +++     +  L+     LG+ N  +  F  ++     P      ++L AC 
Sbjct: 674 LKIMEHEYELEPWPEHYVCLV---DMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAAC- 729

Query: 512 YLVASNKVKEIHGCVLRRSLE 532
               S+  KEI     +R LE
Sbjct: 730 ---RSHSEKEIGEIAAQRLLE 747



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 139/298 (46%), Gaps = 43/298 (14%)

Query: 362 DVLVGNSLINMYSKCEEL------EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           DV   NS +  ++   EL       + E+VFD + D+  ++WN+MI  Y   G    A  
Sbjct: 72  DVSENNSPVEAFAYVLELCGKRRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALA 131

Query: 416 LFIKMQESDVPPNVITWNVLISGY-----IQNGNEDEAV--------------DLFQRMG 456
           L+  M+   VP  + ++  L+        I++G+E  ++               L     
Sbjct: 132 LYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYA 191

Query: 457 KNDKV------------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
           KND +            K +   WNS+++ Y   G+    L +FR+M  +   PN  TI+
Sbjct: 192 KNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIV 251

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESS-LPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
           S L AC     +   KEIH  VL+ S  SS L V N+LI  Y + G +  +  I   M++
Sbjct: 252 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNN 311

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII-----LAHSLAGM 616
            D++TWNSLI GYV +  +  AL+ F  M + G K +  +  SII     L++ LAGM
Sbjct: 312 ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGM 369


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1028

 Score =  328 bits (842), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 215/740 (29%), Positives = 358/740 (48%), Gaps = 83/740 (11%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           +++ Y   G L DAR +F +M   ++  W+ MI  + +       +E F  M +  +   
Sbjct: 267 VINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKST 326

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
                 +L A G   + + G ++H+  IKLG++    V +S++++Y KC K+  A + FE
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------------- 261
           +++E++ V WN+MI GY   GE+ +   LF  M      +   TF               
Sbjct: 387 ALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEM 446

Query: 262 --------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                               N L+  Y + G  + A ++ + M       D  +W  +I 
Sbjct: 447 GSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHM----CDRDNVSWNTIIG 502

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
           G+ Q+   S+A DLF  M+  G++ +G  + S + ACT++  L  G ++H L+VK G   
Sbjct: 503 GYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDR 562

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
            +  G+SLI+MYSKC  +E A +VF  + +  V S N++IAGY Q     +A  LF +M 
Sbjct: 563 VLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL-EEAVVLFQEML 621

Query: 422 ESDVPPNVITWNVLISG------------------------------------YIQNGNE 445
              V P+ IT+  ++                                      Y+ +   
Sbjct: 622 TKGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRM 681

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
            EA  LF  +       ++   W  +++G+ Q G    AL  +++M+     P+  T ++
Sbjct: 682 AEACALFSELSS----PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVT 737

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK- 564
           VL  C+ L +  + + IH  +   + +      N+LID YAK G++  S  +FD M  + 
Sbjct: 738 VLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRS 797

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           ++++WNSLI GY  +G+   AL +FD M+   + P+  TFL ++ A S AG V  G+K+F
Sbjct: 798 NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIF 857

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
             +   Y I   ++H + M+DL GR G L+EA +FIE   ++PD+ +W +LL ACRIHG+
Sbjct: 858 EMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGD 917

Query: 685 IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIE 744
                +A ERL +LEP +     L+  IYA  G+ E+A  +RK  R+   +   G  WI+
Sbjct: 918 DMRGEIAAERLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWID 977

Query: 745 VKNLVYTFVTGGWSESYSDL 764
           V    + F  G   +S+SD+
Sbjct: 978 VGQRRHIFAAG--DQSHSDI 995



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 193/754 (25%), Positives = 349/754 (46%), Gaps = 91/754 (12%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           ++ +YAKC  +  A + F  + E+++  W++M+  YS   +  +V+  F  + ++ +FP+
Sbjct: 101 IVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPN 159

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            F F  +L       + E G+ +H  +IK+G+        +++ +Y KC +L  A+R F+
Sbjct: 160 KFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFD 219

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            + + + V W  + SGY + G  +EA  +F++M  E  +   + F  +I +Y  LG+   
Sbjct: 220 GIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVINTYISLGKLKD 279

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
           A  +   M S    PDV  W  MISG  + G    A++ F  M    V     T+ S +S
Sbjct: 280 ARLLFGEMPS----PDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLS 335

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           A   +  L +G+ +H+ A+K+G   ++ VG+SL++MYSKCE++EAA +VF+ +++++   
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVL 395

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQES--------------------------------- 423
           WN+MI GY   G   K  ELF+ M+ S                                 
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIII 455

Query: 424 --DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK 481
              +  N+   N L+  Y + G  ++A  +F+ M   D V     SWN++I GY Q   +
Sbjct: 456 KKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNV-----SWNTIIGGYVQDENE 510

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
           + A  +F +M S     +   + S L AC  +    + K++H   ++  L+  L   +SL
Sbjct: 511 SEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSL 570

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
           ID Y+K G I  +R +F  M    +++ N+LI GY  +    A + LF +M + G+ P+ 
Sbjct: 571 IDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNLEEAVV-LFQEMLTKGVNPSE 629

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITEC-------YQIIPMIEHY-------------- 640
            TF +I+ A      + LG +    I +        Y  I ++  Y              
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFS 689

Query: 641 -----------SAMIDLYGRSGKLEEAMEFIEDMPIE---PDSSIWEALLTACRIHGNID 686
                      + M+  + ++G  EEA++F ++M  +   PD + +  +L  C +  ++ 
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLR 749

Query: 687 LAVLAIERLFDLEPG-DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV 745
                   +F L    D L    ++ +YA CG  + + +V     +  RR S    W   
Sbjct: 750 EGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQV----FDEMRRRSNVVSW--- 802

Query: 746 KNLVYTFVTGGWSESYSDLLYSWLQN--VPENVT 777
            +L+  +   G++E    +  S  Q+  +P+ +T
Sbjct: 803 NSLINGYAKNGYAEDALKIFDSMRQSHIMPDEIT 836



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 150/577 (25%), Positives = 261/577 (45%), Gaps = 44/577 (7%)

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           GK +HS  + LG+    R+ N+++ +Y KC ++ +A + F S+ EKD  AWNSM+S Y  
Sbjct: 79  GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSS 137

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
           IG+  +  R F  +    I     TF+I++ +  +    +   ++   M  +G+  + + 
Sbjct: 138 IGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYC 197

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
              ++  +A+  R   A  +F  +    V PN V  T   S           + +     
Sbjct: 198 GGALVDMYAKCDRLGDAQRVFDGI----VDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
             G   D L   ++IN Y    +L+ A  +F  +   DV +WN MI+G+ + G    A E
Sbjct: 254 GEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIE 313

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNED-------EAVDLF---------------- 452
            F+ M++S V     T   ++S      N D       EA+ L                 
Sbjct: 314 YFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYS 373

Query: 453 --QRMGKNDKV-----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
             ++M    KV     +RN   WN++I GY   G+ +  + +F  M+SS +  +  T  S
Sbjct: 374 KCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTS 433

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           +L  CA         + H  ++++ L  +L V N+L+D YAK G +  +R IF+ M  +D
Sbjct: 434 LLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRD 493

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
            ++WN++I GYV       A DLF +M S G+  +     S + A +    +  GK+V C
Sbjct: 494 NVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHC 553

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
              +C  +  ++   S++ID+Y + G +E+A +    MP    S +    L A     N+
Sbjct: 554 LSVKC-GLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMP--EWSVVSMNALIAGYSQNNL 610

Query: 686 DLAVLAIERLFD--LEPGDVLIQRLILQIYAICGKPE 720
           + AV+  + +    + P ++    ++      C KPE
Sbjct: 611 EEAVVLFQEMLTKGVNPSEITFATIV----EACHKPE 643



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 233/484 (48%), Gaps = 25/484 (5%)

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
           ++   +L + ++  KL  +R+ F+ M  +  +A         +IG+   +  L   +   
Sbjct: 43  QIHQGLLEICLEQCKLFKSRKVFDEMPHRLALA--------LRIGKAVHSKSLILGI-DS 93

Query: 253 EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
           E +LG    N ++  Y +  Q   A +    +E      DV  W  M+S ++  G+  + 
Sbjct: 94  EGRLG----NAIVDLYAKCAQVSYAEKQFNSLE-----KDVTAWNSMLSMYSSIGQPGKV 144

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
           L  F  +    + PN  T +  +S       +  G +IH   +KMG   +   G +L++M
Sbjct: 145 LRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDM 204

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y+KC+ L  A+RVFD I D +   W  + +GY +AG   +A  +F +M+     P+ + +
Sbjct: 205 YAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAF 264

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
             +I+ YI  G   +A  LF  M   D V     +WN +I+G+ + G +  A+  F  M+
Sbjct: 265 VTVINTYISLGKLKDARLLFGEMPSPDVV-----AWNVMISGHGKRGCEIVAIEYFLNMR 319

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
            S       T+ SVL A   +   +    +H   ++  L S++ V +SL+  Y+K   + 
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME 379

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            +  +F+ +  ++ + WN++I GY  +G  H  ++LF  MKS G   +  TF S++   +
Sbjct: 380 AAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCA 439

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
           ++  +++G + F SI    ++   +   +A++D+Y + G LE+A +  E M  + D+  W
Sbjct: 440 VSHDLEMGSQ-FHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHM-CDRDNVSW 497

Query: 673 EALL 676
             ++
Sbjct: 498 NTII 501



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 104/200 (52%), Gaps = 4/200 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NG   EA+     +   GA   + T++ +L+ C   +S+   R +H+ + +L  ++D   
Sbjct: 710 NGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELT 769

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRER-NLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              L+ +YAKCG +  + +VF++MR R N+ +W+++I  Y+++    + +++F  M Q  
Sbjct: 770 SNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSH 829

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVI-KLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           + PD+  F  +L AC + G    G+ +  ++I + G+         ++ +  + G L  A
Sbjct: 830 IMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEA 889

Query: 212 RRFFESMDEK-DGVAWNSMI 230
             F E+ + K D   W+S++
Sbjct: 890 DDFIEAQNLKPDARLWSSLL 909


>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
 gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
          Length = 969

 Score =  328 bits (842), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 214/737 (29%), Positives = 359/737 (48%), Gaps = 74/737 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDV 91
           +G+ + +I +   +  +G      T++++L  C   + +   R++HA +   +L + +D+
Sbjct: 191 DGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDI 250

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            V    +++Y KCGCLD A + F  M+ R++ +W+ MIGAYS+D ++   ++LF  M+ +
Sbjct: 251 GVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLE 310

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G  P+   F  IL  C      E G+ +H+LV++  +     V NS+L +Y +C     +
Sbjct: 311 GTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDS 370

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGEN-DEAHRLFDKMCRE------------------ 252
           R  F+ M  +D V+W+++I    +   +  +A  L+  M  E                  
Sbjct: 371 RSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGS 430

Query: 253 --EIKLGVVTFNILIRS-----------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
             E+K G +    +I S            N   +C    E  K  + +     +  W  M
Sbjct: 431 LAELKGGKLVHAHVIESGLEGDLVGISLVNMYAKCGTVGEARKVFDRINNRSRIL-WNSM 489

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I+ + Q     +AL LF+EM   GV P+ +T  + ++AC +   L  G  IH+  V  GF
Sbjct: 490 ITAY-QEKDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGF 548

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             DV V  +L NMY+KC  L  A  VFD +  +DV SWN+MIA Y Q      A  L   
Sbjct: 549 AADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWA 608

Query: 420 MQ-----------------------------------ESDVPPNVITWNVLISGYIQNGN 444
           MQ                                   ES +  +++    LI+ Y   G+
Sbjct: 609 MQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGS 668

Query: 445 EDEAVDLFQRMGKNDKVK-RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
            + A ++F  +  N +   R+   W S+I  Y+Q G+   AL ++ +M S     + VT 
Sbjct: 669 LNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTF 728

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
           +SVL ACA+L    + + IH  V+RR L + + V NS++  Y K G+   +  +F+    
Sbjct: 729 ISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKH 788

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           KDI  W +LI  Y  HG    AL +F +++  G++ +  TF++++ A S  G+++ G + 
Sbjct: 789 KDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGLIEEGCEF 848

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           F S+ E   I P +EH+S ++DL  R+G L  A EF+  MP+  ++ +  ALL ACR+HG
Sbjct: 849 FASMAE-LGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTALLAACRVHG 907

Query: 684 NIDLAVLAIERLFDLEP 700
           +++ A    E+L  L+P
Sbjct: 908 DVERARRVAEKLEALDP 924



 Score =  278 bits (712), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 190/686 (27%), Positives = 319/686 (46%), Gaps = 89/686 (12%)

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           E+D+ V+   +++Y KCGCLD A + F  M+ R++ +W+ MIGAYS+D ++   ++LF  
Sbjct: 42  ELDIGVRNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFRE 101

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M+ +G  P+   F  IL  C      E G+ +H+LV++  +     V NS+L +Y +C  
Sbjct: 102 MLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRS 161

Query: 208 LIWAR-RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----- 261
              +R + F  M  +D V+W  MI  Y Q G+   + +LF +M  E      VTF     
Sbjct: 162 WEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILS 221

Query: 262 --------------------------------NILIRSYNQLGQCDVAMEMVKRMESLGI 289
                                           N+ I  Y + G  D A++   RM+    
Sbjct: 222 GCEAPSLLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKR--- 278

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             DV +WT MI  ++Q+G+ S +L LF+EM   G  PN VT  S +S C     L  G +
Sbjct: 279 -RDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQ 337

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI-AGYCQAG 408
           IH+L V+      V+V NSL+ MYS+C   E +  +FD +  +D  SW+++I A   +  
Sbjct: 338 IHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDS 397

Query: 409 YCGKAYELFIKMQESDVPPNVITWNV---------------------------------- 434
           +C  A  L+  M    V P  +  ++                                  
Sbjct: 398 HCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGIS 457

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           L++ Y + G   EA  +F R+    ++      WNS+I  YQ+    + AL +FR+MQ  
Sbjct: 458 LVNMYAKCGTVGEARKVFDRINNRSRIL-----WNSMITAYQE-KDPHEALHLFREMQPE 511

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              P+ +T ++VL AC         + IH  ++     + + V  +L + YAK G++  +
Sbjct: 512 GVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEA 571

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           R +FD M  +D+++WN++I  YV       A+ L   M+  G++P++ TF S++ A S  
Sbjct: 572 RGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDP 631

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM-----PIEPDS 669
             +  G+++   I E  ++   I   + +I +Y   G L  A E  +++         D 
Sbjct: 632 NRLVDGRQIHSWIAES-RLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDL 690

Query: 670 SIWEALLTACRIHGNIDLAVLAIERL 695
            +W +++TA   HG    A+   E++
Sbjct: 691 FLWTSMITAYEQHGEYRKALELYEQM 716



 Score =  255 bits (652), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 197/742 (26%), Positives = 336/742 (45%), Gaps = 94/742 (12%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           +G+ + ++ +   +  +G      T++++L  C   + +   R++HA  +    E  V V
Sbjct: 89  DGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVV 148

Query: 94  KTKLLSVYAKCGCLDDAR-EVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              LL +Y++C   +D+R + F  M+ R++ +W+ MIGAYS+D ++   ++LF  M+ +G
Sbjct: 149 ANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEG 208

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR--VRNSVLAVYVKCGKLIW 210
             P+   F  IL  C      E G+ +H+LV++  +       V N  + +YVKCG L  
Sbjct: 209 TAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDG 268

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------- 261
           A + F  M  +D V+W  MI  Y Q G+   + +LF +M  E      VTF         
Sbjct: 269 AVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEA 328

Query: 262 --------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
                                     N L+  Y++    + +  +  RM       D  +
Sbjct: 329 PSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMS----VRDSVS 384

Query: 296 WTCMISGFA-QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           W+ +I   + ++     AL L++ M   GVMP  + ++  + AC  L  L  G  +H+  
Sbjct: 385 WSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHV 444

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           ++ G   D LVG SL+NMY+KC  +  A +VFD I ++    WNSMI  Y Q     +A 
Sbjct: 445 IESGLEGD-LVGISLVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAY-QEKDPHEAL 502

Query: 415 ELFIKMQESDVPPNVITW-----------------------------------NVLISGY 439
            LF +MQ   V P+ IT+                                     L + Y
Sbjct: 503 HLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVATALFNMY 562

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
            + G+  EA  +F  M     V R+  SWN++IA Y Q      A+ +   MQ     P+
Sbjct: 563 AKCGSLGEARGVFDSM-----VFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPD 617

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
             T  S+L AC+        ++IH  +    LE+ + ++  LI  YA  G++  +R IFD
Sbjct: 618 KATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIFD 677

Query: 560 GMSS------KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
            + S      +D+  W S+I  Y  HG +  AL+L++QM S  ++ +R TF+S++ A + 
Sbjct: 678 NIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACAH 737

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
              +  G+ +   +     +   +   ++++ +YG+ G  +EA    E      D S+W 
Sbjct: 738 LSDLRQGQAIHARVMR-RGLATDVAVANSIVFMYGKCGSFDEASIVFEKTK-HKDISLWT 795

Query: 674 ALLTACRIHGNIDLAVLAIERL 695
           AL+ +   HG+ + A+    RL
Sbjct: 796 ALIASYARHGHGEQALWIFRRL 817



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 171/605 (28%), Positives = 266/605 (43%), Gaps = 87/605 (14%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M + G+ PD  +   +L AC   G  E GKL+   +    +     VRN  + +YVKCG 
Sbjct: 1   MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------ 261
           L  A + F  M  +D V+W  MI  Y Q G+   + +LF +M  E      VTF      
Sbjct: 61  LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSG 120

Query: 262 -----------------------------NILIRSYNQLGQC-DVAMEMVKRMESLGITP 291
                                        N L+  Y++     D  M+   RM+      
Sbjct: 121 CEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKR----R 176

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           DV +WT MI  ++Q+G+ S ++ LF+EM   G  PN VT  S +S C     L  G +IH
Sbjct: 177 DVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIH 236

Query: 352 SLAVKMGFTD--DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +L V+       D+ V N  INMY KC  L+ A + F  +K +DV SW  MI  Y Q G 
Sbjct: 237 ALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGK 296

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISG-----YIQNGNE------------------- 445
              + +LF +M      PN +T+  ++SG      ++ G +                   
Sbjct: 297 FSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANS 356

Query: 446 -----------DEAVDLFQRMGKNDKVKRNTASWNSLI-AGYQQLGQKNNALGVFRKMQS 493
                      +++  LF RM   D V     SW+++I A  ++     +AL ++R M  
Sbjct: 357 LLGMYSRCRSWEDSRSLFDRMSVRDSV-----SWSTIIMACSREDSHCRDALPLYRSMLH 411

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
               P  + +  VL AC  L      K +H  V+   LE  L V  SL++ YAK G +  
Sbjct: 412 EGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEGDL-VGISLVNMYAKCGTVGE 470

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           +R +FD ++++  I WNS+I  Y      H AL LF +M+  G+ P+R TF++++ A   
Sbjct: 471 ARKVFDRINNRSRILWNSMITAY-QEKDPHEALHLFREMQPEGVSPDRITFMTVLNACVN 529

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           A  ++ G+ +   I +       +   +A+ ++Y + G L EA    + M    D   W 
Sbjct: 530 AADLENGRTIHTRIVDS-GFAADVRVATALFNMYAKCGSLGEARGVFDSMVFR-DVVSWN 587

Query: 674 ALLTA 678
            ++ A
Sbjct: 588 NMIAA 592



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 158/580 (27%), Positives = 251/580 (43%), Gaps = 90/580 (15%)

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMV 281
           D V   ++++   ++G  +E   + D++   +++L +   N+ I  Y + G  D A++  
Sbjct: 9   DRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAVQTF 68

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
            RM+      DV +WT MI  ++Q+G+ S +L LF+EM   G  PN VT  S +S C   
Sbjct: 69  ARMKR----RDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAP 124

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE-RVFDMIKDKDVYSWNSM 400
             L  G +IH+L V+      V+V NSL+ MYS+C   E +  + F  +K +DV SW  M
Sbjct: 125 SLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVM 184

Query: 401 IAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG---------------------- 438
           I  Y Q G    + +LF +M      PN +T+  ++SG                      
Sbjct: 185 IGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSL 244

Query: 439 ---------------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
                          Y++ G  D AV  F RM + D V     SW  +I  Y Q G+ + 
Sbjct: 245 ESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVV-----SWTVMIGAYSQDGKFSL 299

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID 543
           +L +FR+M      PN VT +S+L  C       + ++IH  V+  SLES + V NSL+ 
Sbjct: 300 SLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLG 359

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH-GFWHAALDLFDQMKSFGLKPN-- 600
            Y++  +   SR++FD MS +D ++W+++I            AL L+  M   G+ P   
Sbjct: 360 MYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTL 419

Query: 601 ------------------------------RGTFLSIILAHSLA--GMVDLGKKVFCSIT 628
                                          G  + I L +  A  G V   +KVF  I 
Sbjct: 420 ALSMVLEACGSLAELKGGKLVHAHVIESGLEGDLVGISLVNMYAKCGTVGEARKVFDRIN 479

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP--IEPDSSIWEALLTACRIHGNID 686
              +I+     +++MI  Y      E    F E  P  + PD   +  +L AC    +++
Sbjct: 480 NRSRIL-----WNSMITAYQEKDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLE 534

Query: 687 LAVLAIERLFDLE-PGDVLIQRLILQIYAICGKPEDALKV 725
                  R+ D     DV +   +  +YA CG   +A  V
Sbjct: 535 NGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLGEARGV 574



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 177/395 (44%), Gaps = 45/395 (11%)

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           G+ P+ V I + ++ACT L AL  G  I           D+ V N  INMY KC  L+ A
Sbjct: 5   GIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGA 64

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG---- 438
            + F  +K +DV SW  MI  Y Q G    + +LF +M      PN +T+  ++SG    
Sbjct: 65  VQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAP 124

Query: 439 -YIQNGN-------------------------------EDEAVDLFQRMGKNDKVKRNTA 466
             ++ G                                ED  +  F RM + D V     
Sbjct: 125 SLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVV----- 179

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           SW  +I  Y Q G+ + ++ +FR+M      PN VT +S+L  C       + ++IH  V
Sbjct: 180 SWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALV 239

Query: 527 LRRSLESSLP--VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
           +  SLES L   V+N  I+ Y K G +  +   F  M  +D+++W  +I  Y   G +  
Sbjct: 240 VESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSL 299

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMI 644
           +L LF +M   G  PN  TF+SI+       +++ G+++   + E   +   +   ++++
Sbjct: 300 SLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVES-SLESHVVVANSLL 358

Query: 645 DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
            +Y R    E++    + M +  DS  W  ++ AC
Sbjct: 359 GMYSRCRSWEDSRSLFDRMSVR-DSVSWSTIIMAC 392



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 112/266 (42%), Gaps = 39/266 (14%)

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P+ V I ++L AC  L A  + K I   +    LE  + V N  I+ Y K G +  +   
Sbjct: 8   PDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAVQT 67

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           F  M  +D+++W  +I  Y   G +  +L LF +M   G  PN  TF+SI+       ++
Sbjct: 68  FARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLL 127

Query: 618 DLGKKVFCSITE---------CYQIIPM----------------------IEHYSAMIDL 646
           + G+++   + E            ++ M                      +  ++ MI  
Sbjct: 128 EQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGA 187

Query: 647 YGRSGKLEEAMEFIEDMPIE---PDSSIWEALLTACRIHGNID----LAVLAIERLFDLE 699
           Y + GK   +++   +M +E   P+S  + ++L+ C     ++    +  L +E   +  
Sbjct: 188 YSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESH 247

Query: 700 PGDVLIQRLILQIYAICGKPEDALKV 725
             D+ +  L + +Y  CG  + A++ 
Sbjct: 248 L-DIGVLNLTINMYVKCGCLDGAVQT 272


>gi|242062682|ref|XP_002452630.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
 gi|241932461|gb|EES05606.1| hypothetical protein SORBIDRAFT_04g029423 [Sorghum bicolor]
          Length = 605

 Score =  328 bits (842), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 194/586 (33%), Positives = 313/586 (53%), Gaps = 32/586 (5%)

Query: 295 TWTCMISGFAQ---NGRTSQALDLFKEMSFVGVMPNGVTITSAIS---ACTDLKALAMGM 348
           T+ C+++G+A+    GR + A  LF  +      P+ V+  + +S   AC D+       
Sbjct: 40  TYNCLLAGYAKASGPGRLADARRLFDSIPH----PDAVSYNTLLSCHFACGDIDG--AWR 93

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
              ++ V+     DV   N++++  SK   +E AE +F  +  ++  SWN+M+A    +G
Sbjct: 94  VFSTMPVR-----DVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSG 148

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
             G A  LF    E     + I W  ++SGY+  GN  +A++ F+ M       RN  SW
Sbjct: 149 DMGAAENLFRNAPEKT---DAILWTAMVSGYMDTGNVQKAMEYFRAM-----PVRNLVSW 200

Query: 469 NSLIAGYQQLGQKNNALGVFRKM-QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           N+++AGY +  +  +AL VF+ M + +   PN  T+ SVL  C+ L A    +++H   +
Sbjct: 201 NAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCM 260

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           +  L  S+ V  SL+  Y K G++  +  +FD M +KDI+ WN++I GY  HG    A+ 
Sbjct: 261 KLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIK 320

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           LF++MK  G+ P+  T L+++ A    G+ D G + F ++ E Y I P ++HYS M+DL 
Sbjct: 321 LFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLL 380

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
            R+G LE A+  I  MP EP  S +  LLTACR++ N++ A  A  +L + +P +     
Sbjct: 381 CRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYV 440

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
            +  IYA+  + +D  +VR+  ++N    + G  W+E+K + + F +        DL++ 
Sbjct: 441 QLANIYAVANRWDDVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLDLIHD 500

Query: 768 WLQNVPENVTARSSHSGL-----CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
            L  + + + A      L      +EE  K ++   HSEKLA+AF LI +S    T+RI 
Sbjct: 501 KLDRLGKLMKAMGYSPDLDFALHDVEESLKSQMLMRHSEKLAIAFGLISTSPG-MTLRIF 559

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN+R+C  CH  AK +S +   EI L D+   HHF+ G CSCGDYW
Sbjct: 560 KNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 605



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 164/344 (47%), Gaps = 36/344 (10%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CREEI 254
           N++L+ +  CG +  A R F +M  +D  +WN+M+SG  + G  +EA  +F  M  R  +
Sbjct: 76  NTLLSCHFACGDIDGAWRVFSTMPVRDVTSWNTMVSGLSKNGAIEEAEAMFRAMPARNAV 135

Query: 255 ---------------------------KLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
                                      K   + +  ++  Y   G    AME  + M   
Sbjct: 136 SWNAMVAARASSGDMGAAENLFRNAPEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMP-- 193

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAM 346
               ++ +W  +++G+ +N R   AL +FK M     V PN  T++S +  C++L AL  
Sbjct: 194 --VRNLVSWNAVVAGYVKNSRAGDALRVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGF 251

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G ++H   +K+     + VG SL++MY KC +L+ A ++FD +  KD+ +WN+MI+GY Q
Sbjct: 252 GRQVHQWCMKLPLGRSITVGTSLLSMYCKCGDLDDACKLFDEMHTKDIVAWNAMISGYAQ 311

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
            G   KA +LF KM++  V P+ IT   +++  I  G  D  +  F+ M +   ++    
Sbjct: 312 HGGGRKAIKLFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYNIEPQVD 371

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            ++ ++    + G    A+ +   M    F P+     ++L AC
Sbjct: 372 HYSCMVDLLCRAGLLERAVNMIHSMP---FEPHPSAYGTLLTAC 412



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 175/382 (45%), Gaps = 23/382 (6%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +  L  NG + EA  +  ++  + A     ++  ++ A   S  +  A  L  F N 
Sbjct: 107 NTMVSGLSKNGAIEEAEAMFRAMPARNAV----SWNAMVAARASSGDMGAAENL--FRNA 160

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
             + D  + T ++S Y   G +  A E F  M  RNL +W+A++  Y ++ R  + + +F
Sbjct: 161 PEKTDAILWTAMVSGYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDALRVF 220

Query: 146 FLMVQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
             MV+D +  P+      +L  C N      G+ +H   +KL +     V  S+L++Y K
Sbjct: 221 KTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSMYCK 280

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
           CG L  A + F+ M  KD VAWN+MISGY Q G   +A +LF+KM  E +    +T   +
Sbjct: 281 CGDLDDACKLFDEMHTKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPDWITLLAV 340

Query: 265 IRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           + +    G CD  ++  + M E+  I P V  ++CM+    + G   +A+++   M F  
Sbjct: 341 LTACIHTGLCDFGIQCFETMQEAYNIEPQVDHYSCMVDLLCRAGLLERAVNMIHSMPF-- 398

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS---LINMYSKCEELE 380
             P+     + ++AC   K L    E    A +     D     +   L N+Y+     +
Sbjct: 399 -EPHPSAYGTLLTACRVYKNL----EFAEFAARKLIEQDPQNAGAYVQLANIYAVANRWD 453

Query: 381 AAERVFDMIKDKDV-----YSW 397
              RV   +KD  V     YSW
Sbjct: 454 DVSRVRRWMKDNAVVKTPGYSW 475



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 142/311 (45%), Gaps = 25/311 (8%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFV 93
           G GRL +A  + DSI    A V  NT ++   AC D   I  A ++ + + +    DV  
Sbjct: 53  GPGRLADARRLFDSIPHPDA-VSYNTLLSCHFACGD---IDGAWRVFSTMPVR---DVTS 105

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              ++S  +K G +++A  +F  M  RN  +W+AM+ A +          LF    +   
Sbjct: 106 WNTMVSGLSKNGAIEEAEAMFRAMPARNAVSWNAMVAARASSGDMGAAENLFRNAPEK-- 163

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR-NSVLAVYVKCGKLIWAR 212
             D  L+  ++      G  + G +  ++     M     V  N+V+A YVK  +   A 
Sbjct: 164 -TDAILWTAMVS-----GYMDTGNVQKAMEYFRAMPVRNLVSWNAVVAGYVKNSRAGDAL 217

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE---EIKLG--VVTFNILIRS 267
           R F++M E   V  N        +G ++ +   F +   +   ++ LG  +     L+  
Sbjct: 218 RVFKTMVEDAIVQPNPSTLSSVLLGCSNLSALGFGRQVHQWCMKLPLGRSITVGTSLLSM 277

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           Y + G  D A ++   M     T D+  W  MISG+AQ+G   +A+ LF++M   GV+P+
Sbjct: 278 YCKCGDLDDACKLFDEMH----TKDIVAWNAMISGYAQHGGGRKAIKLFEKMKDEGVVPD 333

Query: 328 GVTITSAISAC 338
            +T+ + ++AC
Sbjct: 334 WITLLAVLTAC 344


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 211/661 (31%), Positives = 333/661 (50%), Gaps = 67/661 (10%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           + L+  Y + G     ME  +R+    +  +V  WT ++ GF QN +   A+ +F+EM +
Sbjct: 106 SFLVNVYAKCGN----MEDARRVFDNMLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLY 161

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
            G  P+  T+++ + AC+ L++L +G + H+  +K     D  VG++L ++YSKC  LE 
Sbjct: 162 AGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLED 221

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------- 432
           A + F  I++K+V SW S ++     G   K   LF++M   D+ PN  T          
Sbjct: 222 ALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCE 281

Query: 433 --------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                     N L+  Y+++G   EA  LF RM     V     
Sbjct: 282 ILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMV----- 336

Query: 467 SWNSLIAGYQQLGQ--KNN---------ALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
           +WN++IAG+ Q+ +  K+N         AL +F K+  S   P+  T+ SVL  C+ ++A
Sbjct: 337 TWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLA 396

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
             + ++IH   ++    S + V  SLI  Y+K G+I  +   F  MS++ +I W S+I G
Sbjct: 397 IEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMSTRTMIAWTSMITG 456

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
           +  HG    AL +F+ M   G++PN  TF+ ++ A S AGMV      F  + + Y+I P
Sbjct: 457 FSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKP 516

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
            ++HY  M+D++ R G+LE+A+ FI+ M  EP   IW   +  C+ HGN++L   A E+L
Sbjct: 517 AMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQL 576

Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
             L+P D     L+L +Y    + ED  +VRK+  E          WI +K+ VY+F T 
Sbjct: 577 LSLKPKDPETYVLLLNMYLSAERFEDVSRVRKMMEEEKVGKLKDWSWISIKDKVYSFKTN 636

Query: 756 GWSESYSDL-------LYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFA 808
           G +   S L       L + ++NV   +      S    EEE+    +  HSEKLA+ F 
Sbjct: 637 GKTHPQSSLICKSLEDLLAKVKNVGYEMLESVEISDEEEEEEKTSSPNIYHSEKLAITFG 696

Query: 809 LIGSSQAPHT--IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGD 866
           L      P++  IR+VK+  +C   H   KYVS +   EI + DSK LH F NG+CSCG+
Sbjct: 697 L---ENLPNSSPIRVVKSTLICRDSHNFIKYVSTLAGREIIVKDSKRLHKFANGECSCGN 753

Query: 867 Y 867
           +
Sbjct: 754 F 754



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 235/479 (49%), Gaps = 51/479 (10%)

Query: 60  YINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           Y+ LLQ C+D+ S    + +H   +      + FV + L++VYAKCG ++DAR VF++M 
Sbjct: 70  YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
            RN+  W+ ++  + ++ + +  + +F  M+  G +P  +    +L AC +    + G  
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQ 189

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
            H+ +IK  +     V +++ ++Y KCG+L  A + F  + EK+ ++W S +S     G 
Sbjct: 190 FHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGA 249

Query: 239 NDEAHRLFDKMCREEIK--------------------LGVVTFNILI--------RSYNQ 270
             +  RLF +M   +IK                    LG   +++ I        R  N 
Sbjct: 250 PVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNS 309

Query: 271 L------GQCDV-AMEMVKRMESLGITPDVFTWTCMISGFAQN-----------GRTSQA 312
           L        C V A  +  RM+   +     TW  MI+G AQ             R S+A
Sbjct: 310 LLYLYLKSGCIVEAHRLFNRMDDASMV----TWNAMIAGHAQMMELTKDNLSACHRGSEA 365

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
           L LF +++  G+ P+  T++S +S C+ + A+  G +IH+  +K GF  DV+V  SLI+M
Sbjct: 366 LKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISM 425

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           YSKC  +E A + F  +  + + +W SMI G+ Q G   +A  +F  M  + V PN +T+
Sbjct: 426 YSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTF 485

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
             ++S     G   +A++ F+ M K  K+K     +  ++  + +LG+   AL   +KM
Sbjct: 486 VGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKM 544



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 134/492 (27%), Positives = 219/492 (44%), Gaps = 66/492 (13%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           N +   AI V   +   G+     T   +L AC    S+ L  + HA++     + D  V
Sbjct: 146 NSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASV 205

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L S+Y+KCG L+DA + F  +RE+N+ +W++ + A + +    + + LF  M+   +
Sbjct: 206 GSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDI 265

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P++F     L  C      E G  ++SL IK G     RVRNS+L +Y+K G ++ A R
Sbjct: 266 KPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHR 325

Query: 214 FFESMDEKDGVAWNSMISGYFQIGE-----------NDEAHRLFDKM------------- 249
            F  MD+   V WN+MI+G+ Q+ E             EA +LF K+             
Sbjct: 326 LFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPDLFTLS 385

Query: 250 -----CR-------------EEIKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
                C              + IK G    V+    LI  Y++ G  + A +    M   
Sbjct: 386 SVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFLEMS-- 443

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
             T  +  WT MI+GF+Q+G + QAL +F++MS  GV PN VT    +SAC+    ++  
Sbjct: 444 --TRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACSHAGMVSQA 501

Query: 348 M---EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA-ERVFDMIKDKDVYSWNSMIAG 403
           +   EI     K+    D      +++M+ +   LE A   +  M  +   + W++ IAG
Sbjct: 502 LNYFEIMQKKYKIKPAMDHY--ECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAG 559

Query: 404 YCQAGYCGKAY---ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDK 460
               G     +   E  + ++  D    V+  N+ +S         E V   ++M + +K
Sbjct: 560 CKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLS-----AERFEDVSRVRKMMEEEK 614

Query: 461 V-KRNTASWNSL 471
           V K    SW S+
Sbjct: 615 VGKLKDWSWISI 626



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 124/253 (49%), Gaps = 11/253 (4%)

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           N    + L++ Y + GN ++A  +F  M     ++RN  +W +L+ G+ Q  Q  +A+ V
Sbjct: 101 NFFVMSFLVNVYAKCGNMEDARRVFDNM-----LRRNVVAWTTLMVGFVQNSQPKHAIHV 155

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           F++M  +  YP+  T+ +VL AC+ L +     + H  +++  ++    V ++L   Y+K
Sbjct: 156 FQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSK 215

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G +  +   F  +  K++I+W S +     +G     L LF +M +  +KPN  T  S 
Sbjct: 216 CGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLRLFVEMIAVDIKPNEFTLTSA 275

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           +        ++LG +V+ S+   +     +   ++++ LY +SG + EA      M    
Sbjct: 276 LSQCCEILSLELGTQVY-SLCIKFGYESNLRVRNSLLYLYLKSGCIVEAHRLFNRM---D 331

Query: 668 DSSI--WEALLTA 678
           D+S+  W A++  
Sbjct: 332 DASMVTWNAMIAG 344



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 118/243 (48%), Gaps = 26/243 (10%)

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
           + +L  C    + ++ + +HG V++     +  VM+ L++ YAK GN+  +R +FD M  
Sbjct: 71  VPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNMLR 130

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           ++++ W +L+ G+V +     A+ +F +M   G  P+  T  +++ A S    + LG + 
Sbjct: 131 RNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQF 190

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
              I + Y +       SA+  LY + G+LE+A++    +  E +   W + ++AC  +G
Sbjct: 191 HAYIIK-YHVDFDASVGSALCSLYSKCGRLEDALKTFSRIR-EKNVISWTSAVSACADNG 248

Query: 684 NIDLAVLAIERLF------DLEPG------------DVLIQRLILQIYAICGK--PEDAL 723
               A +   RLF      D++P             ++L   L  Q+Y++C K   E  L
Sbjct: 249 ----APVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNL 304

Query: 724 KVR 726
           +VR
Sbjct: 305 RVR 307


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 244/805 (30%), Positives = 386/805 (47%), Gaps = 79/805 (9%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D+ +   LL++YAK GC   A  +F  M E+++ +WS MI  Y+ ++   E + LF  M+
Sbjct: 205 DLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMI 264

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI-KLGMSCVRRVRNSVLAVYVKCGKL 208
           +    P+       LQAC    + E GK +H + + K  +S V     ++L+ Y + G  
Sbjct: 265 EKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVVSWV-----ALLSGYAQNGMA 319

Query: 209 IWARRFFESM----DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
             +   F +M     + D VA   +++   ++G   +A  L   + R      V     L
Sbjct: 320 YKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASL 379

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV-- 322
           I  Y++ G    A+++ K M    I  DV  W+ MI+ +  +GR  +AL++F +M  V  
Sbjct: 380 IELYSKCGSLGDAVKLFKGM----IVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQ 435

Query: 323 GV-------MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN--SLINMY 373
           G+       M   V    AI++CT   A  +  ++ +  ++  F     +G+   +   Y
Sbjct: 436 GITSCYQISMQPQVQPPLAITSCT--LATHIPWKVKAFYMRAHFR---WLGHFWEIFPTY 490

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP-PNVITW 432
                  +   +F      D          Y        A  +F      D+P P    W
Sbjct: 491 PFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVF-----EDIPNPCSFLW 545

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           NV+I G+  +G    +++L+ +M                     + G K +  GV     
Sbjct: 546 NVMIRGFATDGRFLSSLELYSKM--------------------MEKGLKPDNSGVI---- 581

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
                PN V+ILSVL AC  L A  K +  H  V++   E  + V  +++D Y+K G++ 
Sbjct: 582 -----PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLD 636

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            +R +FD  + KD++ W+++I  Y +HG    A+DLFDQM   G++P+  TF  ++ A S
Sbjct: 637 LARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACS 696

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
            +G+++ GK  F  +TE + I   + +Y+ M+DL GR+G+L EA++ IE+MP+EPD+SIW
Sbjct: 697 HSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIW 756

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
            +LL ACRIH N+DLA    + LF L+P       L+  IYA   +  +  KVRK+    
Sbjct: 757 GSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARR 816

Query: 733 TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------ 786
                 G   +E  N V+ F  G  S    + LY+ L    E + A   H G        
Sbjct: 817 GANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKL----EELAAPMKHLGYVPLTDFV 872

Query: 787 ---IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHH 843
              IEEE KE     HSE+LA+AF LI +S    T+RI KN+R+C  CH   K +S + +
Sbjct: 873 LHDIEEEAKEAALSYHSERLAIAFGLINTSPGT-TLRITKNLRICGDCHNAIKLISKIVN 931

Query: 844 CEIFLADSKCLHHFKNGQCSCGDYW 868
             I + D    H F++G CSCGDYW
Sbjct: 932 RVILVRDMHRFHRFEDGVCSCGDYW 956



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 184/684 (26%), Positives = 313/684 (45%), Gaps = 78/684 (11%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVF 114
           R   ++L QAC +  S+    +LH+ +   T I  D F  TKL S+YAKC  L  AR+VF
Sbjct: 4   RQVLVDLFQACNNGRSV---SQLHSQV-FKTGILHDTFFATKLNSLYAKCASLQAARKVF 59

Query: 115 EDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV-QDGLFPDDFLFPKILQACGNCGDF 173
           ++    N++ W++ + +Y R+++W E + LF LM+   G  PD+F  P  L+AC      
Sbjct: 60  DETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRML 119

Query: 174 EAGKLMHSLVIK---LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
           E GK++H    K   +G      V ++++ +Y KCG++  A + FE     D V W SM+
Sbjct: 120 ELGKVIHGFAKKNDEIGSDMF--VGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMV 177

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVVTF-NILIRSYNQLGQCDVAMEMVKRMESLGI 289
           +GY Q  + +EA  LF +M   +   G +   N L+  Y + G   +A  +  +M     
Sbjct: 178 TGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPE--- 234

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             DV +W+ MI+ +A N   ++AL+LF EM      PN VT+ SA+ AC   + L  G +
Sbjct: 235 -KDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKK 293

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF-DMIKD---KDVYSWNSMIAGYC 405
           IH +AV      DV+   +L++ Y++      +  VF +M+ D    D  +   ++A   
Sbjct: 294 IHKIAV----WKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASS 349

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
           + G   +A  L   +  S    NV     LI  Y + G+  +AV LF+ M     + R+ 
Sbjct: 350 ELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGM-----IVRDV 404

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKM------QSSCF----YPNCVTILSVLPACAYLVA 515
             W+S+IA Y   G+   AL +F +M       +SC+     P     L++         
Sbjct: 405 VIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHI 464

Query: 516 SNKVKEIH---------------------------GCVLRRSLESSLPVMNSLIDTYAKS 548
             KVK  +                             +    L+    ++      Y   
Sbjct: 465 PWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSF 524

Query: 549 GNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK-------PNR 601
             I  +  +F+ + +     WN +I G+   G + ++L+L+ +M   GLK       PNR
Sbjct: 525 NRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNR 584

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAMEFI 660
            + LS++LA    G +  G+     + +  ++   ++   +A++D+Y + G L+ A   +
Sbjct: 585 VSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVA--TAIMDMYSKCGSLDLA-RCL 641

Query: 661 EDMPIEPDSSIWEALLTACRIHGN 684
            D     D   W A++ +  IHG+
Sbjct: 642 FDETAGKDLVCWSAMIASYGIHGH 665



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 128/484 (26%), Positives = 219/484 (45%), Gaps = 44/484 (9%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NG   +++ V  ++ + G +      + +L A  +      A  LH ++       +VFV
Sbjct: 316 NGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFV 375

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y+KCG L DA ++F+ M  R++  WS+MI AY    R  E +E+F  M+Q   
Sbjct: 376 GASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQ--- 432

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
                    ++Q   +C        +   +     +    +   V A Y++     W   
Sbjct: 433 ---------VMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMR-AHFRWLGH 482

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
           F+E        A +   S  F  G   ++ R+  K            F I+  S+N++  
Sbjct: 483 FWEIFPTYPFQAADMSKSNIFAYGLQYDS-RILTK------------FAIMYVSFNRIDA 529

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM-------SFVGVMP 326
             +  E +         P  F W  MI GFA +GR   +L+L+ +M          GV+P
Sbjct: 530 ASIVFEDIP-------NPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIP 582

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           N V+I S + AC +L AL  G   HS  ++ GF  D+LV  ++++MYSKC  L+ A  +F
Sbjct: 583 NRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLF 642

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
           D    KD+  W++MIA Y   G+  KA +LF +M ++ V P+ +T+  ++S    +G  +
Sbjct: 643 DETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLE 702

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           E    FQ M +   + R  +++  ++    + GQ + A+ +   M      P+     S+
Sbjct: 703 EGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVE---PDASIWGSL 759

Query: 507 LPAC 510
           L AC
Sbjct: 760 LGAC 763



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 216/484 (44%), Gaps = 60/484 (12%)

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
           R   ++  +  K G++         N L     +++  +++      P+V  W   +  +
Sbjct: 18  RSVSQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSY 77

Query: 304 AQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG-FTD 361
            +  +  + L LF  M    G  P+  TI  A+ AC  L+ L +G  IH  A K      
Sbjct: 78  CREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGS 137

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           D+ VG++L+ +YSKC ++  A +VF+  +  D   W SM+ GY Q     +A  LF +M 
Sbjct: 138 DMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMV 197

Query: 422 ESD-VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
             D    ++   N L++ Y + G E  A +LF +M + D +     SW+++IA Y     
Sbjct: 198 MMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVI-----SWSTMIACYANNEA 252

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
            N AL +F +M    F PN VT++S L ACA               + R+LE        
Sbjct: 253 ANEALNLFHEMIEKRFEPNSVTVVSALQACA---------------VSRNLEE------- 290

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
                   G  ++   ++     KD+++W +L+ GY  +G  + ++ +F  M S G++P+
Sbjct: 291 --------GKKIHKIAVW-----KDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPD 337

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY----SAMIDLYGRSGKLEEA 656
               + I+ A S  G+    ++  C     Y +           +++I+LY + G L +A
Sbjct: 338 AVAVVKILAASSELGIF---QQALC--LHGYVVRSGFNSNVFVGASLIELYSKCGSLGDA 392

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
           ++  + M +  D  IW +++ A  IHG    A+   +++  +  G       I   Y I 
Sbjct: 393 VKLFKGMIVR-DVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQG-------ITSCYQIS 444

Query: 717 GKPE 720
            +P+
Sbjct: 445 MQPQ 448



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/405 (24%), Positives = 189/405 (46%), Gaps = 34/405 (8%)

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           AC + ++++   ++HS   K G   D      L ++Y+KC  L+AA +VFD     +V+ 
Sbjct: 13  ACNNGRSVS---QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHL 69

Query: 397 WNSMIAGYCQAGYCGKAYELFIKM--QESDVPPN-VITWNVLISGYIQNGNEDEAVDLFQ 453
           WNS +  YC+     +   LF  M     + P N  I   +     ++     + +  F 
Sbjct: 70  WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFA 129

Query: 454 RMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
           +  KND++  +    ++L+  Y + GQ   AL VF + Q     P+ V   S++      
Sbjct: 130 K--KNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQR----PDTVLWTSMVTGYQ-- 181

Query: 514 VASNKVKE----IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
             +N  +E        V+    +  LP++NSL++ YAK+G    +  +F  M  KD+I+W
Sbjct: 182 -QNNDPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISW 240

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
           +++I  Y  +   + AL+LF +M     +PN  T +S + A +++  ++ GKK+   I  
Sbjct: 241 STMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIH-KIAV 299

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLTACRIHGNID 686
              ++  +    A++  Y ++G   ++M    +M    I+PD+     +L A    G   
Sbjct: 300 WKDVVSWV----ALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQ 355

Query: 687 LAV----LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
            A+      +   F+    +V +   ++++Y+ CG   DA+K+ K
Sbjct: 356 QALCLHGYVVRSGFN---SNVFVGASLIELYSKCGSLGDAVKLFK 397


>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 207/610 (33%), Positives = 312/610 (51%), Gaps = 86/610 (14%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P+ F W  MI G + +     A+D +  M   GV PN  T    + +C  + A   G +I
Sbjct: 95  PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE--------------------------- 383
           H   +K+G   D  V  SLINMY++  EL  AE                           
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCL 214

Query: 384 ----RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
               R+F+ I  +D  SWN+MIAGY Q+G   +A   F +M+ ++V PN  T   ++S  
Sbjct: 215 DDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSAC 274

Query: 440 IQNGN-----------EDEA-----------VDLFQRMGKNDKVK--------RNTASWN 469
            Q+G+           ED             +D++ + G  DK +        ++  SWN
Sbjct: 275 AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWN 334

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
            +I GY  +     AL +FRKMQ S   PN VT +S+LPACAYL A +  K IH  + ++
Sbjct: 335 VMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394

Query: 530 SLE-SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
            L  ++  +  SLID YAK GNI  ++ +F GM  K + +WN++I G  +HG  + AL+L
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALEL 454

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F QM+  G +P+  TF+ ++ A S AG+V+LG++ F S+ E Y I P ++HY  MIDL G
Sbjct: 455 FRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLG 514

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+G  +EA   +++M ++PD +IW +LL ACR+HGN++L   A + LF+LEP +     L
Sbjct: 515 RAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVL 574

Query: 709 ILQIYAICGKPEDALKVR-KLERENTRRNSFGQCWIEVKNLVYTF-VTGGWSESYSDLLY 766
           +  IYA  G+ +D  ++R KL  +  ++      +  +  +  +F    G     S++LY
Sbjct: 575 LSNIYATAGRWDDVARIRTKLNDKGMKKXQ--DIYKMLDEIDQSFGERPGXVPDTSEVLY 632

Query: 767 SWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIR 826
                               ++EE KE     HSEKLA+AF LI S++   TIRIVKN+R
Sbjct: 633 D-------------------MDEEWKEGSLSHHSEKLAIAFGLI-STKPETTIRIVKNLR 672

Query: 827 MCVHCHETAK 836
             +    T K
Sbjct: 673 SSLRHGLTVK 682



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 216/490 (44%), Gaps = 80/490 (16%)

Query: 92  FVKTKLLSVYA--KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           F  +KL+   A    G L  A  +FE + + N + W+ MI   S        ++ +  M+
Sbjct: 65  FALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRML 124

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             G+ P+ + FP +L++C   G  + GK +H  V+KLG+     V  S++ +Y + G+L 
Sbjct: 125 LCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELG 184

Query: 210 W-------------------------------ARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +                               ARR FE +  +D V+WN+MI+GY Q G 
Sbjct: 185 YAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGR 244

Query: 239 NDEAHRLFDKMCREEIKLGVVTF-----------------------------------NI 263
            +EA   F +M R  +     T                                    N 
Sbjct: 245 FEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNA 304

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGI-TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
           LI  Y++ G  D A ++ +     GI   D+ +W  MI G++      +AL LF++M   
Sbjct: 305 LIDMYSKCGDLDKARDLFE-----GICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQS 359

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVK--MGFTDDVLVGNSLINMYSKCEELE 380
            V PN VT  S + AC  L AL +G  IH+   K  +G T+  L   SLI+MY+KC  +E
Sbjct: 360 NVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLW-TSLIDMYAKCGNIE 418

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
           AA++VF  +K K + SWN+MI+G    G+   A ELF +M++    P+ IT+  ++S   
Sbjct: 419 AAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACS 478

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
             G  +     F  M ++  +      +  +I    + G  + A  + + M+     P+ 
Sbjct: 479 HAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNME---MKPDG 535

Query: 501 VTILSVLPAC 510
               S+L AC
Sbjct: 536 AIWGSLLGAC 545



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 206/477 (43%), Gaps = 73/477 (15%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCG----- 105
           G +    T+  LL++C    +    +++H   L L  E D FV T L+++YA+ G     
Sbjct: 127 GVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYA 186

Query: 106 --------------------------CLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
                                     CLDDAR +FE++  R+  +W+AMI  Y++  R+ 
Sbjct: 187 ELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFE 246

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E +  F  M +  + P++     +L AC   G  E G  + S +   G+    R+ N+++
Sbjct: 247 EALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALI 306

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +Y KCG L  AR  FE + EKD ++WN MI GY  +    EA  LF KM +  ++   V
Sbjct: 307 DMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDV 366

Query: 260 TFNILIRSYNQLGQCDVA-----------------------MEMVKRMESLGITPDVF-- 294
           TF  ++ +   LG  D+                        ++M  +  ++     VF  
Sbjct: 367 TFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAG 426

Query: 295 -------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
                  +W  MISG A +G  + AL+LF++M   G  P+ +T    +SAC+    + +G
Sbjct: 427 MKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELG 486

Query: 348 MEIHSLAVK-MGFTDDVLVGNSLINMYSKC---EELEAAERVFDMIKDKDVYSWNSMIAG 403
            +  S  V+    +  +     +I++  +    +E EA  +  +M  D  +  W S++ G
Sbjct: 487 RQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAI--WGSLL-G 543

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDK 460
            C+     +  E   K      P N   + +L + Y   G  D+   +  R   NDK
Sbjct: 544 ACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARI--RTKLNDK 598



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 154/308 (50%), Gaps = 8/308 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           +GR  EA+     +         +T + +L AC  S S+ L   + +++ +     ++ +
Sbjct: 242 SGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRL 301

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +Y+KCG LD AR++FE + E+++ +W+ MIG YS    ++E + LF  M Q  +
Sbjct: 302 VNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNV 361

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIK--LGMSCVRRVRNSVLAVYVKCGKLIWA 211
            P+D  F  IL AC   G  + GK +H+ + K  LG++    +  S++ +Y KCG +  A
Sbjct: 362 EPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNT-SLWTSLIDMYAKCGNIEAA 420

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           ++ F  M  K   +WN+MISG    G  + A  LF +M  E  +   +TF  ++ + +  
Sbjct: 421 KQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHA 480

Query: 272 GQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           G  ++  +    M E   I+P +  + CMI    + G   +A  L K M    + P+G  
Sbjct: 481 GLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNME---MKPDGAI 537

Query: 331 ITSAISAC 338
             S + AC
Sbjct: 538 WGSLLGAC 545


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 218/773 (28%), Positives = 374/773 (48%), Gaps = 110/773 (14%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV----KC---GKLIWAR 212
           + + LQA  N G       + +L ++  M+ +   +    A+YV    +C   G L  AR
Sbjct: 39  YGRSLQAADNGGGGGMEAPLRTLDVQEAMTMLTEGKAVQSAMYVPLLHRCVEMGSLGAAR 98

Query: 213 RFFESMDEK----DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
                M +     D     S+++ Y + G   +A RLFD M                   
Sbjct: 99  AVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPER---------------- 142

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
                                  +V TWT +++G+  N + +  L++F EM  +G  P+ 
Sbjct: 143 -----------------------NVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSH 179

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            T+ + ++AC     + +G ++H  A+K G      +GNSL ++Y+K   L++A R F  
Sbjct: 180 YTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWR 239

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGK-AYELFIKMQESDVPPNVITWNVLISG--------- 438
           I +K+V +W +MI+   +   C +    LFI M    V PN  T   ++S          
Sbjct: 240 IPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNL 299

Query: 439 --------------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                                     Y++ G  DEA+ LF++M     +     +WN++I
Sbjct: 300 GKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASII-----TWNAMI 354

Query: 473 AGYQQL-----------GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
           +GY Q+            +   AL +FR ++ S   P+  T  S+L  C+ ++A  + ++
Sbjct: 355 SGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQ 414

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           IH   ++    S + V ++L++ Y K G I  +   F  M ++  +TW S+I GY  HG 
Sbjct: 415 IHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQ 474

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
              A+ LF++M+  G++PN  TF+S++ A S AG+V+  +  F  + + Y I P+++HY 
Sbjct: 475 PQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYG 534

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            MID++ R G++E+A  FI+    EP+ +IW +L+  CR HGN++LA  A ++L +L+P 
Sbjct: 535 CMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPK 594

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
            +    L+L +Y    + +D  +VRKL ++        + WI +K+ VY F     +   
Sbjct: 595 GIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQ 654

Query: 762 SDLLYSWLQNVPENVTARS----SHSGLCIEEEEKEEISGI---HSEKLALAFALIGSSQ 814
           +  LY  L+N+ E   A       ++ L   E++++  +G    HSE+LA+A  L+ +  
Sbjct: 655 ATELYQLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPP 714

Query: 815 APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
              T+R+ KNI MC  CH + K  S++ + EI + DSK LH FK+G+CSCGD+
Sbjct: 715 GA-TVRVTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/530 (29%), Positives = 256/530 (48%), Gaps = 60/530 (11%)

Query: 34  GNGRLNEAITVLD-----SIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-T 87
           G G +   +  LD     ++ T+G  V+   Y+ LL  C++  S+  AR +H  +     
Sbjct: 50  GGGGMEAPLRTLDVQEAMTMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGA 109

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
             D+FV T L++ Y +CG   DAR +F+ M ERN+ TW+A++  Y+ + +    +E+F  
Sbjct: 110 GADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVE 169

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M++ G +P  +     L AC    D + GK +H   IK G   +  + NS+ ++Y K G 
Sbjct: 170 MLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGS 229

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDE-AHRLFDKM----------------- 249
           L  A R F  + EK+ + W +MIS   +  E  E    LF  M                 
Sbjct: 230 LDSALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMS 289

Query: 250 ---CREEIKLG--VVTF--------NILIRS-----YNQLGQCDVAMEMVKRMESLGITP 291
               R ++ LG  V  F        N+ +++     Y + G+ D AM + ++ME   I  
Sbjct: 290 LCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASI-- 347

Query: 292 DVFTWTCMISGFAQ-----------NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
              TW  MISG+AQ             R  QAL +F+++    + P+  T +S +S C+ 
Sbjct: 348 --ITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSA 405

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
           + AL  G +IH+  +K GF  DV+V ++L+NMY+KC  ++ A + F  +  +   +W SM
Sbjct: 406 MMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSM 465

Query: 401 IAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDK 460
           I+GY Q G   +A +LF +M+ + V PN IT+  L+S     G  +EA   F  M K   
Sbjct: 466 ISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYC 525

Query: 461 VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           ++     +  +I  + +LG+  +A    ++   + F PN     S++  C
Sbjct: 526 IEPVVDHYGCMIDMFVRLGRVEDAFSFIKR---TGFEPNEAIWSSLVAGC 572



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 25/308 (8%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA---- 81
           D+  D L    R  +A+T+   +     K    T+ ++L  C    ++    ++HA    
Sbjct: 362 DSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIK 421

Query: 82  --FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
             FL+     DV V + L+++Y KCGC+ DA + F +M  R   TW++MI  YS+  + +
Sbjct: 422 SGFLS-----DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQ 476

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS-- 197
           E ++LF  M   G+ P++  F  +L AC   G  E  +    ++ K    C+  V +   
Sbjct: 477 EAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK--EYCIEPVVDHYG 534

Query: 198 -VLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
            ++ ++V+ G++  A  F +    E +   W+S+++G    G  + A    DK+   + K
Sbjct: 535 CMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPK 594

Query: 256 LGVVTFNILIRSYNQLGQ-CDVA-MEMVKRMESLGITPDVFTWTCM---ISGFAQNGRT- 309
            G+ T+ +L+  Y    +  DVA +  + + E +GI  D  +W  +   +  F  N RT 
Sbjct: 595 -GIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDR-SWITIKDKVYFFRANDRTH 652

Query: 310 SQALDLFK 317
            QA +L++
Sbjct: 653 PQATELYQ 660


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 206/710 (29%), Positives = 356/710 (50%), Gaps = 77/710 (10%)

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
           N +++ Y + G +  A R+FD M    +     T+N L+ +   L    +  +M     S
Sbjct: 45  NHLLTAYGKAGRHARARRVFDAMPHPNL----FTYNALLST---LAHARLLSDMEALFAS 97

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEM--SFVGVMPNGVTITSAISACTDLKAL 344
           +    D+ ++  +I+GF+  G  +QA+ ++  +  +   V P+ +T+++ + A + L   
Sbjct: 98  M-TQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDR 156

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSK----------------------------- 375
           A+G + H   +++GF  +  VG+ L++MY+K                             
Sbjct: 157 ALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGL 216

Query: 376 --CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
             C+ +E A R+F+++ D+D  +W +M+ G+ Q G   +A E+F +M+   +  +  T+ 
Sbjct: 217 LRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFG 276

Query: 434 VLISG-----YIQNGNEDEAVDLFQRMGKNDKVK-------------------------R 463
            +++       ++ G +  A  +  R   N  V                          +
Sbjct: 277 SILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCK 336

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           N  SW +LI GY Q G    A+ VF +MQ     P+  T+ SV+ +CA L +  +  + H
Sbjct: 337 NIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFH 396

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
              L   L   + V N+L+  Y K G+I  +  +FD MS  D ++W +L+ GY   G   
Sbjct: 397 CLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAK 456

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
             +DLF++M + G+KP+  TF+ ++ A S AG V+ G+  F S+ + + I+P+ +HY+ M
Sbjct: 457 ETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCM 516

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           IDLY RSGKL+EA EFI+ MP+ PD+  W  LL+ACR+ G++++   A E L +++P + 
Sbjct: 517 IDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLLEIDPQNP 576

Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
               L+  ++A  G+  +  ++R+  R+   +   G  WI+ KN V+ F     S   S 
Sbjct: 577 ASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPCSK 636

Query: 764 LLY---SWLQN--VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
            +Y    WL +  + E      S     + + +K  +   HSEKLA+AF LI   Q    
Sbjct: 637 GIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLIFVPQ-EMP 695

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IRIVKN+R+CV CH   K++S +   +I + D+   H F +G CSCGD+W
Sbjct: 696 IRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDFW 745



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 135/539 (25%), Positives = 238/539 (44%), Gaps = 101/539 (18%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           ++F    LLS  A    L D   +F  M +R++ +++A+I  +S      + V ++  ++
Sbjct: 71  NLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALL 130

Query: 150 Q--DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           Q    + P       ++ A    GD   GK  H  +++LG      V + ++ +Y K   
Sbjct: 131 QADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSL 190

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           +  A+R F+ +D K+ V +N+MI+G  +    +EA RLF+ M   +     +T+  ++  
Sbjct: 191 VGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRD----SITWTTMVTG 246

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           + Q G    A+E+ +RM   GI  D +T+                               
Sbjct: 247 FTQNGLESEALEIFRRMRFQGIAIDQYTF------------------------------- 275

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
                S ++AC  L AL  G +IH+  ++  + D+V VG++L++MYSKC  ++ AE VF 
Sbjct: 276 ----GSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFR 331

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN------------------- 428
            +  K++ SW ++I GY Q G   +A  +F +MQ   + P+                   
Sbjct: 332 RMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEE 391

Query: 429 ----------------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                           +   N L++ Y + G+ ++A  LF  M  +D+V     SW +L+
Sbjct: 392 GAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQV-----SWTALV 446

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC--AYLVASNK-----VKEIHGC 525
           +GY Q G+    + +F KM +    P+ VT + VL AC  A  V   +     +++ HG 
Sbjct: 447 SGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGI 506

Query: 526 VLRRSLESSLPVMNS---LIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
           V         P+ +    +ID Y++SG +  +      M    D I W +L+    L G
Sbjct: 507 V---------PIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 163/307 (53%), Gaps = 7/307 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VF 92
           NG  +EA+ +   +  QG  + + T+ ++L AC   +++   +++HA++ + T  D  VF
Sbjct: 250 NGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYI-IRTRYDDNVF 308

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V + L+ +Y+KC  +  A  VF  M  +N+ +W+A+I  Y ++    E V +F  M +DG
Sbjct: 309 VGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG 368

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + PDD+    ++ +C N    E G   H L +  G+     V N+++ +Y KCG +  A 
Sbjct: 369 IDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAH 428

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           R F+ M   D V+W +++SGY Q G   E   LF+KM  + +K   VTF  ++ + ++ G
Sbjct: 429 RLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAG 488

Query: 273 QCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
             +        M+   GI P    +TCMI  ++++G+  +A +  K+M    + P+ +  
Sbjct: 489 FVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMP---MHPDAIGW 545

Query: 332 TSAISAC 338
            + +SAC
Sbjct: 546 GTLLSAC 552



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 189/423 (44%), Gaps = 48/423 (11%)

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           V   +V +   +++   +C  +++AR +FE M +R+  TW+ M+  ++++    E +E+F
Sbjct: 201 VDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIF 260

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M   G+  D + F  IL ACG     E GK +H+ +I+        V ++++ +Y KC
Sbjct: 261 RRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKC 320

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI-----KLG--- 257
             +  A   F  M  K+ ++W ++I GY Q G ++EA R+F +M R+ I      LG   
Sbjct: 321 RSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVI 380

Query: 258 ---------------------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT 290
                                      +   N L+  Y + G  + A  +   M      
Sbjct: 381 SSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMS----F 436

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME- 349
            D  +WT ++SG+AQ GR  + +DLF++M   GV P+GVT    +SAC+    +  G   
Sbjct: 437 HDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSY 496

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
            HS+    G          +I++YS+  +L EA E +  M    D   W ++++     G
Sbjct: 497 FHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556

Query: 409 --YCGK-AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
               GK A E  +++     P N  ++ +L S +   G  +E   L + M      K   
Sbjct: 557 DMEIGKWAAENLLEID----PQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPG 612

Query: 466 ASW 468
            SW
Sbjct: 613 CSW 615


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  328 bits (841), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 190/597 (31%), Positives = 307/597 (51%), Gaps = 56/597 (9%)

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
            M+  G+  N     + ++ C   +A+  G  +H+  +K  +   V +   LI  Y KC+
Sbjct: 48  HMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCD 107

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
            L  A  VFD++ +++V SW +MI+ Y Q GY  +A  LF++M  S   PN  T+  +++
Sbjct: 108 SLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLT 167

Query: 438 G-----------------------------------YIQNGNEDEAVDLFQRMGKNDKVK 462
                                               Y ++G   EA  +FQ + + D V 
Sbjct: 168 SCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVV- 226

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
               S  ++I+GY QLG    AL +FR++Q      N VT  SVL A + L A +  K++
Sbjct: 227 ----SCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQV 282

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           H  +LR  + S + + NSLID Y+K GN+ Y+R IFD +  + +I+WN+++ GY  HG  
Sbjct: 283 HNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGEG 342

Query: 583 HAALDLFDQM-KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPMIEHY 640
              L+LF+ M     +KP+  T L+++   S  G+ D G  +F  +T     + P  +HY
Sbjct: 343 REVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHY 402

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
             ++D+ GR+G++E A EF++ MP EP ++IW  LL AC +H N+D+      +L  +EP
Sbjct: 403 GCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIEP 462

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
            +     ++  +YA  G+ ED   +R L  +       G+ WIE+  +++TF     S  
Sbjct: 463 ENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSHP 522

Query: 761 YSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIG 811
             + + + +Q     ++AR   +G           ++EE+KE+I   HSEKLAL F LI 
Sbjct: 523 RREEVSAKVQ----ELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIA 578

Query: 812 SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           + ++   IR++KN+R+CV CH  AKY S ++  E+ L D    H    G+CSCGDYW
Sbjct: 579 TPESV-PIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 137/503 (27%), Positives = 234/503 (46%), Gaps = 51/503 (10%)

Query: 9   FQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACI 68
           FQ+   L T  SN       L+    + RL EA+     +A +G       Y  +L  C+
Sbjct: 16  FQKPRLLSTFPSNSHHV---LNIHIHDTRLREALL---HMALRGLDTNFQDYNTVLNECL 69

Query: 69  DSNSIHLARKLHAFLNLVTEID-VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSA 127
              +I   +++HA +     +  V+++T+L+  Y KC  L DAR VF+ M ERN+ +W+A
Sbjct: 70  RKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTA 129

Query: 128 MIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
           MI AYS+     + + LF  M++ G  P++F F  +L +C     F  G+ +HS +IKL 
Sbjct: 130 MISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLN 189

Query: 188 MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
                 V +S+L +Y K GK+  AR  F+ + E+D V+  ++ISGY Q+G ++EA  LF 
Sbjct: 190 YEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFR 249

Query: 248 KMCREEIKLGVVTFNILIRS-------------YNQLGQCDVA---------MEMVKRME 285
           ++ RE ++   VT+  ++ +             +N L + +V          ++M  +  
Sbjct: 250 RLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCG 309

Query: 286 SLGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAI 335
           +L     +F         +W  M+ G++++G   + L+LF  M     V P+ VT+ + +
Sbjct: 310 NLTYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVL 369

Query: 336 SACTDLKALAMGMEI--HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
           S C+       GM+I     + K+    D      +++M  +   +EAA   F+ +K K 
Sbjct: 370 SGCSHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAA---FEFVK-KM 425

Query: 394 VYSWNSMIAGYCQAGYCGKAYEL----FIKMQESDV-PPNVITWNVLISGYIQNGNEDEA 448
            +  ++ I G C  G C     L    F+  Q   + P N   + +L + Y   G  ++ 
Sbjct: 426 PFEPSAAIWG-CLLGACSVHSNLDIGEFVGHQLLQIEPENAGNYVILSNLYASAGRWEDV 484

Query: 449 VDLFQRMGKNDKVKRNTASWNSL 471
             L   M K    K    SW  L
Sbjct: 485 RSLRNLMLKKAVTKEPGRSWIEL 507



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 125/257 (48%), Gaps = 41/257 (15%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           +V +WT MIS ++Q G  SQAL LF +M   G  PN  T  + +++C       +G +IH
Sbjct: 123 NVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIH 182

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           S  +K+ +   V VG+SL++MY+K  ++  A  +F  + ++DV S  ++I+GY Q G   
Sbjct: 183 SHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDE 242

Query: 412 KAYELFIKMQ-----------------------------------ESDVPPNVITWNVLI 436
           +A ELF ++Q                                    S+VP  V+  N LI
Sbjct: 243 EALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLI 302

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM-QSSC 495
             Y + GN   A  +F  +      +R   SWN+++ GY + G+    L +F  M   + 
Sbjct: 303 DMYSKCGNLTYARRIFDTLH-----ERTVISWNAMLVGYSKHGEGREVLELFNLMIDENK 357

Query: 496 FYPNCVTILSVLPACAY 512
             P+ VT+L+VL  C++
Sbjct: 358 VKPDSVTVLAVLSGCSH 374


>gi|296084954|emb|CBI28363.3| unnamed protein product [Vitis vinifera]
          Length = 930

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 247/879 (28%), Positives = 407/879 (46%), Gaps = 95/879 (10%)

Query: 30  DFLCGNGRLNEAITVLDSIATQGAKVRRNTYI--NLLQACIDSNSIHLARKLHAFL-NLV 86
           D LCG+G               G  +R ++++   +L+AC     +   R +H  +    
Sbjct: 107 DMLCGSG---------------GGLLRPDSFVFAVVLRACGMVECLSYGRGVHGLVVKQS 151

Query: 87  TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
           + +D FV+  L+S+Y  CG L+DA  VF  + + +L  WS+++  Y ++    E + +F 
Sbjct: 152 SVVDSFVENALVSMYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFC 211

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            MV  G+ PD F F  +L AC N   ++ G   H  +IK+G      + NS++  Y KCG
Sbjct: 212 DMVSGGIEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKCG 271

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            L   RR F  M EK+ V+WN+ I+GY       EA R+F  +  E  +    +   +++
Sbjct: 272 DLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIFQILMEEVSQCDDFSLLSILK 331

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
           + + LG  D   E+   +   GI  + +               S  LD+     ++G   
Sbjct: 332 AVSGLGHLDHGKEIHGYILRAGIETNRYV-------------VSSLLDM-----YIG--- 370

Query: 327 NGVTITSAISACTDLKALAMGMEI--HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
                      C D ++L   +E+    L    G   D  +  SL+   S    LE A+R
Sbjct: 371 -----------CIDHESLYPRVEVPLKLLNYLEGGGYDEFIMTSLLKWCSLESSLETAKR 419

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           VF  ++  D   W+++I+G+   G   +A +LF KMQ   +  N  T+  +I   +   N
Sbjct: 420 VFTRVEQPDTAPWSALISGHSWNGCFAEALKLFRKMQFDGIKANEFTFTSVILACLALEN 479

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL------------------- 485
             +  +L  ++ ++   + N +  N+LI  Y +L Q   AL                   
Sbjct: 480 LRKGKELHCKILRSG-YESNFSVVNTLINLYSELWQHKQALKLCSMIPDSEISWNFLIRA 538

Query: 486 -----------GVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS 534
                       +  ++Q S    + V+   +  +C+  V  N   + H  + +R L S 
Sbjct: 539 CLGAEDYEIIHKLLWRIQVSHGNLDPVSACDIFASCSSPVLLNVGTQAHAYMTKRGLISH 598

Query: 535 LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
             + NSLI  Y+  G    +   F+ M  KD  +W S++   V HG    AL+L  QM+ 
Sbjct: 599 PTISNSLIQMYSACGKFDEAVQAFNLMPEKDTCSWTSILSARVEHGHPSEALNLISQMRW 658

Query: 595 FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLE 654
                ++ TF S++ A +  G+VD   ++F S+ E Y I P+ EHYS M+++ GR+G  E
Sbjct: 659 KNKPADQSTFRSVLNACAQMGLVDEAFRLFFSMKEVYGIEPLEEHYSCMVEVLGRAGMFE 718

Query: 655 EAMEFIEDMP-IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIY 713
           E ++FI  +P  +    IW  LL++ RIHGN+ +A  A E+L +LEP D     L+ Q+ 
Sbjct: 719 EVLDFINGVPTFKLGPLIWRTLLSSSRIHGNMKVAQYAAEKLLELEPSDFSANLLLEQVL 778

Query: 714 AICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP 773
              G+ ++ALK++      T+       WIE++N +Y F +            + ++   
Sbjct: 779 LTLGEWDNALKLKT----KTKSMRASSSWIEIRNRIYEFASDENPAKEVSAKLAEIEGKM 834

Query: 774 ENV--TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH--TIRIVKNIRMCV 829
           E +   A  +H     EEEE + +   H+E  ALAF LI     PH   +R+VKN+RMC 
Sbjct: 835 EELGYVADKNHLLHNAEEEEYDGVGLHHTEMKALAFGLI---SLPHGMPVRVVKNVRMCG 891

Query: 830 HCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            CH   K++S     E+ + D    HHF++G+CSC D W
Sbjct: 892 DCHSACKFMSTFLERELVVKDPYSFHHFRDGKCSCRDTW 930



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 17/240 (7%)

Query: 425 VPPNVI-----TWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           +P N I      +N+ +  Y+  G   EA  LF  M +     R+  SW  +++GY + G
Sbjct: 42  IPQNEIHARTRLFNLYLRMYVNAGAMQEARKLFDEMPE-----RSLVSWTIVMSGYARHG 96

Query: 480 QKNNALGVFRKM----QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
             +  L +F  M          P+      VL AC  +   +  + +HG V+++S     
Sbjct: 97  PASEVLMMFWDMLCGSGGGLLRPDSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDS 156

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            V N+L+  Y   G +  +  +F G+   D++ W+S++ GYV +G     L +F  M S 
Sbjct: 157 FVENALVSMYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMVSG 216

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLE 654
           G++P+   F  ++ A +     D G +  C I +  +     +E  ++++D Y + G LE
Sbjct: 217 GIEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLE--NSLMDFYAKCGDLE 274



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 148/356 (41%), Gaps = 50/356 (14%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQ---ACIDSNSIHLARKLHAFLNL 85
           L  + G G L+    +   I   G +  R    +LL     CID  S++   ++   L L
Sbjct: 330 LKAVSGLGHLDHGKEIHGYILRAGIETNRYVVSSLLDMYIGCIDHESLY--PRVEVPLKL 387

Query: 86  VTEI-----DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWRE 140
           +  +     D F+ T LL   +    L+ A+ VF  + + +   WSA+I  +S +  + E
Sbjct: 388 LNYLEGGGYDEFIMTSLLKWCSLESSLETAKRVFTRVEQPDTAPWSALISGHSWNGCFAE 447

Query: 141 VVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
            ++LF  M  DG+  ++F F  ++ AC    +   GK +H  +++ G      V N+++ 
Sbjct: 448 ALKLFRKMQFDGIKANEFTFTSVILACLALENLRKGKELHCKILRSGYESNFSVVNTLIN 507

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM----------- 249
           +Y +  +   A +   SM     ++WN +I       + +  H+L  ++           
Sbjct: 508 LYSELWQHKQALKLC-SMIPDSEISWNFLIRACLGAEDYEIIHKLLWRIQVSHGNLDPVS 566

Query: 250 -------CREEIKLGVVT-----------------FNILIRSYNQLGQCDVAMEMVKRME 285
                  C   + L V T                  N LI+ Y+  G+ D A++    M 
Sbjct: 567 ACDIFASCSSPVLLNVGTQAHAYMTKRGLISHPTISNSLIQMYSACGKFDEAVQAFNLMP 626

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
                 D  +WT ++S   ++G  S+AL+L  +M +     +  T  S ++AC  +
Sbjct: 627 E----KDTCSWTSILSARVEHGHPSEALNLISQMRWKNKPADQSTFRSVLNACAQM 678


>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1221

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 200/599 (33%), Positives = 315/599 (52%), Gaps = 18/599 (3%)

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAI 335
           A+   +R+      PD F +  ++ G++++     ++ +F EM   G + P+  +    +
Sbjct: 221 ALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVV 280

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
            A  + ++L  G ++H  A+K G    + V  +LI MY +C  +  A +VFD +   ++ 
Sbjct: 281 KAAANFRSLRTGFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLV 340

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           +WN+++    +      A E+F KM    +  N  +WNV+++GYI+ G  + A  +F  M
Sbjct: 341 AWNAVVTACFRGNDVSGAREIFDKM----LVRNHTSWNVMLAGYIKAGELECAKRIFSEM 396

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
              D V     SW+++I G+   G  N +   FR++  +   PN V++  VL AC+   A
Sbjct: 397 PHRDDV-----SWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGA 451

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLIC 574
               K +HG V +      + V N+LID Y++ GN+  +R +F+GM  K  I++W S+I 
Sbjct: 452 FEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIA 511

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
           G  +HG    A+ +F++M   G+ P+  +F+S++ A S AG++  G+  F  +   Y I 
Sbjct: 512 GLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIE 571

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER 694
           P +EHY  M+DLYGRSGKL++A  FI  MPI P + +W  LL AC  HGNI+LA    +R
Sbjct: 572 PAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQR 631

Query: 695 LFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           L +L+P +     L+  +YA  GK +D   +RK       +       +EV   +Y F  
Sbjct: 632 LNELDPNNSGDLVLLSNVYATAGKWKDVASIRKSMIVQRIKKITAWSLVEVGKTMYKFTA 691

Query: 755 GGWS-----ESYSDLLYSWLQNVPENVTARSSHSGLC-IEEEEKEEISGIHSEKLALAFA 808
                    E++  L    L+   E   A    S L  +EEEEKE+    HSEKLALAFA
Sbjct: 692 CEKKKEIDIEAHEKLKEIILRLRDEAGYAPEVASALYDVEEEEKEDQVSKHSEKLALAFA 751

Query: 809 LIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
           L    +  + IRIVKN+R+C  CH   K  S ++  EI + D    H FK+G CSCGDY
Sbjct: 752 LARLPKGAN-IRIVKNLRICRDCHAVMKLTSRVYGVEIVIRDRNRFHSFKDGSCSCGDY 809



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 202/408 (49%), Gaps = 13/408 (3%)

Query: 106 CLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKIL 164
            L  AR +     E + + ++ ++  YS        V +F  M++ G +FPD F F  ++
Sbjct: 221 ALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVV 280

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
           +A  N      G  MH   +K G+     V  +++ +Y +CG + +AR+ F+ M + + V
Sbjct: 281 KAAANFRSLRTGFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLV 340

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           AWN++++  F+  +   A  +FDKM    +     ++N+++  Y + G+    +E  KR+
Sbjct: 341 AWNAVVTACFRGNDVSGAREIFDKM----LVRNHTSWNVMLAGYIKAGE----LECAKRI 392

Query: 285 ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
            S     D  +W+ MI GF+ NG  +++   F+E+    + PN V++T  +SAC+   A 
Sbjct: 393 FSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAF 452

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIAG 403
             G  +H    K G++  V V N+LI+MYS+C  +  A  VF+ +++K  + SW SMIAG
Sbjct: 453 EFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAG 512

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
               G+  +A  +F +M ES V P+ I++  L+      G   E    F +M +   ++ 
Sbjct: 513 LAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEP 572

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
               +  ++  Y + G+   A     +M      P  +   ++L AC+
Sbjct: 573 AVEHYGCMVDLYGRSGKLQKAYSFICQMP---IPPTAIVWRTLLGACS 617



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/366 (23%), Positives = 173/366 (47%), Gaps = 12/366 (3%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           ++ AC   N +  AR++   + +       V   +L+ Y K G L+ A+ +F +M  R+ 
Sbjct: 345 VVTACFRGNDVSGAREIFDKMLVRNHTSWNV---MLAGYIKAGELECAKRIFSEMPHRDD 401

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            +WS MI  +S +  + E    F  +++  + P++     +L AC   G FE GK +H  
Sbjct: 402 VSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGF 461

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG-VAWNSMISGYFQIGENDE 241
           V K G S +  V N+++ +Y +CG +  AR  FE M EK   V+W SMI+G    G  +E
Sbjct: 462 VEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEE 521

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMI 300
           A R+F++M    +    ++F  L+ + +  G          +M+ +  I P V  + CM+
Sbjct: 522 AIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSKMKRVYHIEPAVEHYGCMV 581

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
             + ++G+  +A     +M    + P  +   + + AC+    + +  ++     ++   
Sbjct: 582 DLYGRSGKLQKAYSFICQMP---IPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPN 638

Query: 361 D--DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY--CGKAYEL 416
           +  D+++ +++     K +++ +  +   + + K + +W+ +  G     +  C K  E+
Sbjct: 639 NSGDLVLLSNVYATAGKWKDVASIRKSMIVQRIKKITAWSLVEVGKTMYKFTACEKKKEI 698

Query: 417 FIKMQE 422
            I+  E
Sbjct: 699 DIEAHE 704



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/475 (22%), Positives = 201/475 (42%), Gaps = 62/475 (13%)

Query: 162 KILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL---AVYVKCGKLIWARRFFESM 218
           KI +    C +  A   +H   IK G+         ++   A+ +    L +ARR     
Sbjct: 174 KITRKDQYCKNLRALTQIHGFFIKSGVDTDSYFIGKLILHCAISI-SDALPYARRLLLCF 232

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHR---LFDKMCREE-IKLGVVTFNILIRSYNQLGQC 274
            E D   +N+++ GY    E+DE H    +F +M R+  I     +F  ++++       
Sbjct: 233 PEPDAFMFNTLVRGY---SESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSL 289

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
               +M  +    G+   +F  T +I  + + G    A  +F EM      PN V   + 
Sbjct: 290 RTGFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMP----QPNLVAWNAV 345

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           ++AC     ++   EI    +    T      N ++  Y K  ELE A+R+F  +  +D 
Sbjct: 346 VTACFRGNDVSGAREIFDKMLVRNHTS----WNVMLAGYIKAGELECAKRIFSEMPHRDD 401

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN---------- 444
            SW++MI G+   G   +++  F ++  +++ PN ++   ++S   Q+G           
Sbjct: 402 VSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGF 461

Query: 445 ------------EDEAVDLFQRMG---------KNDKVKRNTASWNSLIAGYQQLGQKNN 483
                        +  +D++ R G         +  + KR+  SW S+IAG    G    
Sbjct: 462 VEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEE 521

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG--CVLRR--SLESSLPVMN 539
           A+ +F +M  S   P+ ++ +S+L AC++   +  +KE  G    ++R   +E ++    
Sbjct: 522 AIRIFNEMTESGVMPDEISFISLLYACSH---AGLIKEGEGYFSKMKRVYHIEPAVEHYG 578

Query: 540 SLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
            ++D Y +SG +  + +    M      I W +L+     HG     ++L +Q+K
Sbjct: 579 CMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSSHG----NIELAEQVK 629



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 14/205 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           NG  NE+ +    +     +    +   +L AC  S +    + LH F+        V V
Sbjct: 414 NGSFNESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSV 473

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              L+ +Y++CG +  AR VFE M+E R++ +W++MI   +      E + +F  M + G
Sbjct: 474 NNALIDMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESG 533

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV------LAVYVKCG 206
           + PD+  F  +L AC + G  + G+   S      M  V  +  +V      + +Y + G
Sbjct: 534 VMPDEISFISLLYACSHAGLIKEGEGYFS-----KMKRVYHIEPAVEHYGCMVDLYGRSG 588

Query: 207 KLIWARRFFESMD-EKDGVAWNSMI 230
           KL  A  F   M      + W +++
Sbjct: 589 KLQKAYSFICQMPIPPTAIVWRTLL 613


>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  328 bits (841), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 201/582 (34%), Positives = 320/582 (54%), Gaps = 11/582 (1%)

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           +  W  MI+ + +NGR+ +A+D+++ M   G++P+  T +S   A +DL  +  G   H 
Sbjct: 142 IVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHG 201

Query: 353 LAVKMGF-TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
            +V +G    +V VG++L++MY+K  ++  A  V D +  KDV  + ++I GY   G  G
Sbjct: 202 QSVVLGVGVSNVFVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDG 261

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SWNS 470
           ++ ++F  M +  +  N  T   L S  +  GN ++        G   K    +A +W S
Sbjct: 262 ESLQVFRNMTKKGIEANEYT---LSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVTWTS 318

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +I G  Q G++  AL  FR+M  S   PN  T+ SVL AC+ L    + K+IH  V++  
Sbjct: 319 VIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFG 378

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           L+    V  +LID Y K G+   +R++F+G+   D+++ NS+I  Y  +GF H AL LF 
Sbjct: 379 LDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFS 438

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
            MK  GL+PN  T+L ++ A + AG+++ G  +F S      I    +HY+ M+DL GR+
Sbjct: 439 GMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRA 498

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           G+L+EA   I  + I  D  IW  LL+ACRIHG++++A   + R+ DL P D     L+ 
Sbjct: 499 GRLKEAEMLINQVNIS-DVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLS 557

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSE-SYSDL---LY 766
            +YA  G     ++++   RE   + +    W++V+  ++TF+ G WS  ++ D+   L 
Sbjct: 558 NLYASTGNWSKVIEMKSAMREMRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLE 617

Query: 767 SWLQNVPENVTARSSHSGLC-IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNI 825
             ++ V E      +   L  ++EE+K      HSEKLA+AFAL  S+    TIRI+KN+
Sbjct: 618 ELIEKVKELGYVPDTRFVLQDLDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNL 677

Query: 826 RMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
           R+C  CH   K+VS +   +I   D K  HHF+NG CSCGDY
Sbjct: 678 RVCGDCHTWMKFVSKIVGRDIIARDVKRFHHFRNGLCSCGDY 719



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 261/543 (48%), Gaps = 41/543 (7%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
           Y +L+Q CI   SI    K+ +   L       +  KL+  Y KCG +  AR+VF+++  
Sbjct: 81  YSSLIQQCIGIKSITDITKIQSHA-LKRGFHHSLGNKLIDAYLKCGSVVYARKVFDEVPH 139

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           R++  W++MI +Y R+ R +E ++++  MV DG+ PD+F F  + +A  + G    G+  
Sbjct: 140 RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRA 199

Query: 180 H--SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
           H  S+V+ +G+S V  V ++++ +Y K GK+  AR   + +  KD V + ++I GY   G
Sbjct: 200 HGQSVVLGVGVSNV-FVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHG 258

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
           E+ E+ ++F  M ++ I+    T + ++     L        +   +   G+   V TWT
Sbjct: 259 EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAV-TWT 317

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            +I G  QNGR   AL  F++M    + PN  T++S + AC+ L  L  G +IH++ +K 
Sbjct: 318 SVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKF 377

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           G   D  VG +LI+ Y KC   E A  VF+ + + DV S NSMI  Y Q G+  +A +LF
Sbjct: 378 GLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLF 437

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
             M+++ + PN +TW  ++S     G  +E   +F     +  ++     +  ++    +
Sbjct: 438 SGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGR 497

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
            G+   A  +  ++  S    + V   ++L AC           IHG V     E +  V
Sbjct: 498 AGRLKEAEMLINQVNIS----DVVIWRTLLSAC----------RIHGDV-----EMAKRV 538

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
           MN +ID   + G    +  +   +              Y   G W   +++   M+   L
Sbjct: 539 MNRVIDLAPEDGG---THVLLSNL--------------YASTGNWSKVIEMKSAMREMRL 581

Query: 598 KPN 600
           K N
Sbjct: 582 KKN 584



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 204/445 (45%), Gaps = 21/445 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH--AFLNLVTEIDVF 92
           NGR  EAI +   +   G      T+ ++ +A  D   +H  ++ H  + +  V   +VF
Sbjct: 155 NGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVF 214

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V + L+ +YAK G + DAR V + +  +++  ++A+I  YS      E +++F  M + G
Sbjct: 215 VGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKG 274

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK----L 208
           +  +++    +L  CGN  D  +G+L+H L++K G+        SV+   V+ G+    L
Sbjct: 275 IEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESA-VTWTSVIVGLVQNGREEIAL 333

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
           +  R+   S    +    +S++     +   ++  ++   + +  + +       LI  Y
Sbjct: 334 LKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFY 393

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
            + G  ++A  +   +    +  DV +   MI  +AQNG   +AL LF  M   G+ PN 
Sbjct: 394 GKCGSTEIARSVFNGL----LEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNN 449

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMG---FTDDVLVGNSLINMYSKCEELEAAERV 385
           VT    +SAC +   L  G  I S A   G    T D      ++++  +   L+ AE +
Sbjct: 450 VTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYA--CMVDLLGRAGRLKEAEML 507

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-YIQNGN 444
            + +   DV  W ++++     G    A  +  ++   D+ P     +VL+S  Y   GN
Sbjct: 508 INQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRV--IDLAPEDGGTHVLLSNLYASTGN 565

Query: 445 EDEAVDLFQRMGKNDKVKRNTA-SW 468
             + +++   M +  ++K+N A SW
Sbjct: 566 WSKVIEMKSAM-REMRLKKNPAMSW 589



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 3/179 (1%)

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           S++  C  + +   + +I    L+R    SL   N LID Y K G++VY+R +FD +  +
Sbjct: 83  SLIQQCIGIKSITDITKIQSHALKRGFHHSLG--NKLIDAYLKCGSVVYARKVFDEVPHR 140

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
            I+ WNS+I  Y+ +G    A+D++ +M   G+ P+  TF S+  A S  G+V  G++  
Sbjct: 141 HIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAH 200

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
                    +  +   SA++D+Y + GK+ +A   + D  +  D  ++ AL+     HG
Sbjct: 201 GQSVVLGVGVSNVFVGSALVDMYAKFGKMRDA-RLVSDQVVGKDVVLFTALIVGYSHHG 258


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  328 bits (841), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 224/800 (28%), Positives = 381/800 (47%), Gaps = 95/800 (11%)

Query: 130 GAYSRDQRW--REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
            AY+   +W   E+  L  L    G+  D F   + LQ C   GD   G+ +H  V++ G
Sbjct: 32  AAYAAALQWLEDELTSLAILPSVPGV--DSFACARQLQGCIARGDARGGRAVHGHVVRRG 89

Query: 188 MSCVRRV----RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
              V R+     N +L +Y K G L  ARR F+ M E++ V++ +++  + Q G+ + A 
Sbjct: 90  --GVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAA 147

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG--------------- 288
            LF ++  E  ++       +++    +    +A  +      LG               
Sbjct: 148 ALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAY 207

Query: 289 ----------------ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
                           +  D   WT M+S +++N     A  +F +M   G  PN   +T
Sbjct: 208 SLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALT 267

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           S + A   L ++ +G  IH  A+K     +  VG +L++MY+KC +++ A   F+MI   
Sbjct: 268 SVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYD 327

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN------------------------ 428
           DV   + MI+ Y Q+    +A+ELF+++  S V PN                        
Sbjct: 328 DVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIH 387

Query: 429 -----------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
                      +   N L+  Y +  + D ++ +F  +   ++V     SWN+++ G+ Q
Sbjct: 388 NHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEV-----SWNTIVVGFSQ 442

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
            G    AL VF +MQ++      VT  SVL ACA   +     +IH  + + +  +   +
Sbjct: 443 SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVI 502

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
            NSLIDTYAK G I  +  +F  +  +DII+WN++I GY LHG    AL+LFD+M    +
Sbjct: 503 GNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNV 562

Query: 598 KPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
           + N  TF++++   S  G+V+ G  +F S+   + I P +EHY+ ++ L GR+G+L +A+
Sbjct: 563 ESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDAL 622

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICG 717
           +FI D+P  P + +W ALL++C IH N+ L   + E++ ++EP D     L+  +YA  G
Sbjct: 623 QFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAG 682

Query: 718 KPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT 777
             +    +RK  R    R   G  W+E+K  ++ F  G        ++ + L    E + 
Sbjct: 683 SLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSVDHPDMRVINAML----EWLN 738

Query: 778 ARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMC 828
            ++S  G           +++E+K  +  +HSE+LALA+ L+ +    H IRI+KN+R C
Sbjct: 739 LKTSREGYIPDINVVLHDVDKEQKTRMLWVHSERLALAYGLVMTPPG-HPIRILKNLRSC 797

Query: 829 VHCHETAKYVSMMHHCEIFL 848
           + CH     +S +   EI +
Sbjct: 798 LDCHTAFTVISKIVKREIIV 817



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 153/639 (23%), Positives = 282/639 (44%), Gaps = 103/639 (16%)

Query: 64  LQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           LQ CI        R +H  +     V  +D+F    LL++Y K G L  AR +F+ M ER
Sbjct: 66  LQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPER 125

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           N+ ++  ++ A+++   +     LF  +  +G   + F+   +L+             +H
Sbjct: 126 NMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVH 185

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
           S   KLG      V + ++  Y  C  +  A   F  +  KD V W +M+S Y +    +
Sbjct: 186 SCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPE 245

Query: 241 EAHRLFDKM--------------------CREEIKLGVVTFNILIRSYN----------- 269
            A R+F KM                    C   + LG       I++ N           
Sbjct: 246 NAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALL 305

Query: 270 -------QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
                   +    +A EM+          DV   + MIS +AQ+ +  QA +LF  +   
Sbjct: 306 DMYAKCGDIKDARLAFEMIP-------YDDVILLSFMISRYAQSNQNEQAFELFLRLMRS 358

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
            V+PN  +++S + ACT++  L  G +IH+ A+K+G   D+ VGN+L++ Y+KC +++++
Sbjct: 359 SVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSS 418

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---------- 432
            ++F  ++D +  SWN+++ G+ Q+G   +A  +F +MQ + +P   +T+          
Sbjct: 419 LKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACAST 478

Query: 433 -------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTAS 467
                                    N LI  Y + G   +A+ +FQ +     ++R+  S
Sbjct: 479 ASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-----MERDIIS 533

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           WN++I+GY   GQ  +AL +F +M  S    N +T +++L  C+     N     HG  L
Sbjct: 534 WNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVN-----HGLSL 588

Query: 528 RRSL------ESSLPVMNSLIDTYAKSGNIVYS-RTIFDGMSSKDIITWNSLICGYVLHG 580
             S+      + S+     ++    ++G +  + + I D  S+   + W +L+   ++H 
Sbjct: 589 FDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHK 648

Query: 581 FWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSLAGMVD 618
             + AL  F   K   ++P +  T++ +   ++ AG +D
Sbjct: 649 --NVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLD 685



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 126/507 (24%), Positives = 228/507 (44%), Gaps = 35/507 (6%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           G    A  +   +  +G +V +     +L+  I  ++  LA  +H+    L  + + FV 
Sbjct: 141 GDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHNAFVG 200

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           + L+  Y+ C  + DA  VF  +  ++   W+AM+  YS +        +F  M   G  
Sbjct: 201 SGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCK 260

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+ F    +L+A         GK +H   IK        V  ++L +Y KCG +  AR  
Sbjct: 261 PNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLA 320

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           FE +   D +  + MIS Y Q  +N++A  LF ++ R  +     + + ++++   + Q 
Sbjct: 321 FEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQL 380

Query: 275 DVAMEMVKRMESLGITPDVF-------------------------------TWTCMISGF 303
           D   ++      +G   D+F                               +W  ++ GF
Sbjct: 381 DFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGF 440

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
           +Q+G   +AL +F EM    +    VT +S + AC    ++    +IH    K  F +D 
Sbjct: 441 SQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDT 500

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
           ++GNSLI+ Y+KC  +  A +VF  + ++D+ SWN++I+GY   G    A ELF +M +S
Sbjct: 501 VIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKS 560

Query: 424 DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
           +V  N IT+  L+S     G  +  + LF  M  +  +K +   +  ++    + G+ N+
Sbjct: 561 NVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLND 620

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPAC 510
           AL     + S+   P+ +   ++L +C
Sbjct: 621 ALQFIGDIPSA---PSAMVWRALLSSC 644



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 103/458 (22%), Positives = 205/458 (44%), Gaps = 38/458 (8%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLS 99
           A  V   +   G K       ++L+A +   S+ L + +H   +  + + +  V   LL 
Sbjct: 247 AFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLD 306

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +YAKCG + DAR  FE +   ++   S MI  Y++  +  +  ELF  +++  + P+++ 
Sbjct: 307 MYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYS 366

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
              +LQAC N    + GK +H+  IK+G      V N+++  Y KC  +  + + F S+ 
Sbjct: 367 LSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLR 426

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR------SYNQLGQ 273
           + + V+WN+++ G+ Q G  +EA  +F +M   ++    VT++ ++R      S    GQ
Sbjct: 427 DANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQ 486

Query: 274 --------------------------CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
                                     C    + +K  + L +  D+ +W  +ISG+A +G
Sbjct: 487 IHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHL-MERDIISWNAIISGYALHG 545

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVG 366
           + + AL+LF  M+   V  N +T  + +S C+    +  G+ +  S+ +  G    +   
Sbjct: 546 QAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHY 605

Query: 367 NSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
             ++ +  +   L +A + + D+        W ++++  C   +   A   F   +  ++
Sbjct: 606 TCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSS-CII-HKNVALGRFSAEKILEI 663

Query: 426 PPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
            P   T  VL+S         + V L ++  +N  V++
Sbjct: 664 EPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRK 701



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 116/258 (44%), Gaps = 4/258 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           +G   EA++V   +        + TY ++L+AC  + SI  A ++H  +   T   D  +
Sbjct: 443 SGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVI 502

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+  YAKCG + DA +VF+ + ER++ +W+A+I  Y+   +  + +ELF  M +  +
Sbjct: 503 GNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFDRMNKSNV 562

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
             +D  F  +L  C + G    G  L  S+ I  G+         ++ +  + G+L  A 
Sbjct: 563 ESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDAL 622

Query: 213 RFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           +F   +      + W +++S    I +N    R   +   E       T+ +L   Y   
Sbjct: 623 QFIGDIPSAPSAMVWRALLSSCI-IHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAA 681

Query: 272 GQCDVAMEMVKRMESLGI 289
           G  D    + K M ++G+
Sbjct: 682 GSLDQVALLRKSMRNIGV 699


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  328 bits (840), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 192/569 (33%), Positives = 303/569 (53%), Gaps = 37/569 (6%)

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           +  CT  K L  G  +H   ++  F  D+++ N+L+NMY+KC  LE A +VFD + ++D 
Sbjct: 58  LKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDF 117

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS----------------- 437
            +W ++I+GY Q      A  LF +M      PN  T + +I                  
Sbjct: 118 VTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGF 177

Query: 438 ----GYIQNGNEDEAV-DLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNA 484
               G+  N +   A+ DL+ R G  D  +        RN  SWN+LIAG+ +      A
Sbjct: 178 CVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKA 237

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           L +F+ M    F P+  +  S+  AC+      + K +H  +++   +      N+L+D 
Sbjct: 238 LELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 297

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           YAKSG+I  +R IFD ++ +D+++WNSL+  Y  HGF + A+  F++M+  G++PN  +F
Sbjct: 298 YAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISF 357

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           LS++ A S +G++D G   +  + +   I+    HY  ++DL GR+G L  A+ FIE+MP
Sbjct: 358 LSVLTACSHSGLLDEGWHYY-ELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMP 416

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
           IEP ++IW+ALL ACR+H N +L   A E +F+L+P D     ++  IYA  G+  DA +
Sbjct: 417 IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAAR 476

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY-SDLLYSW---LQNVPE-NVTAR 779
           VRK  +E+  +      W+E++N ++ FV          ++   W   L  + E      
Sbjct: 477 VRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPD 536

Query: 780 SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVS 839
           +SH  + ++++E+E     HSEK+ALAFAL+ +     TI I KNIR+C  CH   K  S
Sbjct: 537 TSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGS-TIHIKKNIRVCGDCHSAIKLAS 595

Query: 840 MMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
                EI + D+   HHFK+G CSC DYW
Sbjct: 596 KAVGREIIVRDTNRFHHFKDGACSCKDYW 624



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 209/454 (46%), Gaps = 48/454 (10%)

Query: 55  VRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREV 113
           V R  Y  LL+ C     +   R +H  L   +   D+ +   LL++YAKCG L++AR+V
Sbjct: 49  VDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKV 108

Query: 114 FEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF 173
           F+ M ER+  TW+ +I  YS+  R  + + LF  M++ G  P++F    +++A       
Sbjct: 109 FDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRG 168

Query: 174 EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
             G  +H   +K G      V +++L +Y + G +  A+  F++++ ++ V+WN++I+G+
Sbjct: 169 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 228

Query: 234 FQIGENDEAHRLFDKMCREE-------------------------------IKLG--VVT 260
            +    ++A  LF  M RE                                IK G  +V 
Sbjct: 229 ARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 288

Query: 261 F--NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
           F  N L+  Y + G    A ++  R+       DV +W  +++ +AQ+G  ++A+  F+E
Sbjct: 289 FAGNTLLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGNEAVCWFEE 344

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M   G+ PN ++  S ++AC+    L  G   + L  K G   +     +++++  +  +
Sbjct: 345 MRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGD 404

Query: 379 LEAAER-VFDMIKDKDVYSWNSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
           L  A R + +M  +     W +++     +        A E   ++   D  P+VI +N+
Sbjct: 405 LNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNI 464

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
             SG    G  ++A  + ++M ++   K    SW
Sbjct: 465 YASG----GRWNDAARVRKKMKESGVKKEPACSW 494



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 140/290 (48%), Gaps = 44/290 (15%)

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           +V  N L+  Y + G  + A ++  +M       D  TWT +ISG++Q+ R   AL LF 
Sbjct: 86  LVMNNTLLNMYAKCGSLEEARKVFDKMPER----DFVTWTTLISGYSQHDRPFDALVLFN 141

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
           +M   G  PN  T++S I A    +    G ++H   VK GF  +V VG++L+++Y++  
Sbjct: 142 QMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYG 201

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW----- 432
            ++ A+ VFD ++ ++  SWN++IAG+ +     KA ELF  M      P+  ++     
Sbjct: 202 LMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFG 261

Query: 433 ------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                         N L+  Y ++G+  +A  +F R+ K D V 
Sbjct: 262 ACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV- 320

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
               SWNSL+  Y Q G  N A+  F +M+     PN ++ LSVL AC++
Sbjct: 321 ----SWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSH 366



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 173/390 (44%), Gaps = 43/390 (11%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D   +  +L+ C        G+++H  +I+        + N++L +Y KCG L  AR+ F
Sbjct: 50  DRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVF 109

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-------- 267
           + M E+D V W ++ISGY Q     +A  LF++M R        T + +I++        
Sbjct: 110 DKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGC 169

Query: 268 ---------------------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
                                      Y + G  D A  +   +ES     DV +W  +I
Sbjct: 170 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRN---DV-SWNALI 225

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +G A+   T +AL+LF+ M   G  P+  +  S   AC+    L  G  +H+  +K G  
Sbjct: 226 AGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 285

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
                GN+L++MY+K   +  A ++FD +  +DV SWNS++  Y Q G+  +A   F +M
Sbjct: 286 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEM 345

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
           +   + PN I++  +++    +G  DE    ++ M K D +      + +++    + G 
Sbjct: 346 RRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVLEAWHYVTIVDLLGRAGD 404

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            N AL    +M      P      ++L AC
Sbjct: 405 LNRALRFIEEMP---IEPTAAIWKALLNAC 431



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 172/359 (47%), Gaps = 5/359 (1%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKT 95
           R  +A+ + + +   G      T  ++++A           +LH F +    + +V V +
Sbjct: 132 RPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGS 191

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            LL +Y + G +DDA+ VF+ +  RN  +W+A+I  ++R     + +ELF  M+++G  P
Sbjct: 192 ALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRP 251

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
             F +  +  AC + G  E GK +H+ +IK G   V    N++L +Y K G +  AR+ F
Sbjct: 252 SHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIF 311

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           + + ++D V+WNS+++ Y Q G  +EA   F++M R  I+   ++F  ++ + +  G  D
Sbjct: 312 DRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLD 371

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
                 + M+  GI  + + +  ++    + G  ++AL   +EM    + P      + +
Sbjct: 372 EGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMP---IEPTAAIWKALL 428

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           +AC   K   +G        ++   DD      L N+Y+       A RV   +K+  V
Sbjct: 429 NACRMHKNTELGAYAAEHVFELD-PDDPGPHVILYNIYASGGRWNDAARVRKKMKESGV 486



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 2/174 (1%)

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           ++L  C       + + +HG +++      L + N+L++ YAK G++  +R +FD M  +
Sbjct: 56  TLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPER 115

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           D +TW +LI GY  H     AL LF+QM  FG  PN  T  S+I A +       G ++ 
Sbjct: 116 DFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLH 175

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
               +C      +   SA++DLY R G +++A    + +    D S W AL+  
Sbjct: 176 GFCVKC-GFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS-WNALIAG 227


>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 642

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 208/689 (30%), Positives = 341/689 (49%), Gaps = 89/689 (12%)

Query: 77  RKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
           + +HA L + + +    FV  KLL +Y++ G  D A +VF+++ + N Y W+++I  Y  
Sbjct: 19  KSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVE 78

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
           ++++ E   LF  M ++ +   +F    +L+A      F+ G+ ++  V+K G +    V
Sbjct: 79  NRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFAFDLIV 138

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
           +NSVL ++++C K+                               D A + FD+MC ++I
Sbjct: 139 QNSVLDLFMRCRKV-------------------------------DTARQAFDEMCEKDI 167

Query: 255 KLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
               V++N++I  Y    + D+A +   RM       +V +WT MI G+ + G  ++A  
Sbjct: 168 ----VSWNMMISGYGNNDRVDIARKFFDRMPE----RNVVSWTSMICGYVKAGDMAEAQV 219

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
           LF  M                                          D+   N +++ Y 
Sbjct: 220 LFDSMP---------------------------------------VKDLASWNVMVSGYM 240

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
              +   A  +F  +   D  SWN MI+G+C+AG    A + F +M       NVI+W +
Sbjct: 241 DIGDCVNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNK----NVISWGI 296

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           ++ GYI+NG+ + A  LF +M       +N  +W+++I GY + GQ   AL +F + +  
Sbjct: 297 MLDGYIKNGDTNGARCLFDQMPM-----KNLVTWSTMIGGYARNGQPLKALELFERFKEQ 351

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              P+   IL ++ AC+ L   +  + I    +  SL S L V  SLID YAK G+I  +
Sbjct: 352 DIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRVFTSLIDMYAKCGSIEKA 411

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
             +F+    KD++ ++++I     HG    A+ LFD+M+   +KP+  TFL ++ A +  
Sbjct: 412 LQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHG 471

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G+VD G+K F  +TE + I P  +HY+ ++DL GR G LEEA   I +MPI P S +W A
Sbjct: 472 GLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGA 531

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           LL ACR+H N+ LA +A   LF +EP +     L+  IYA  G+     KVR   RE+  
Sbjct: 532 LLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRV 591

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
           R + G  WIE+ ++V+ FV G  S + SD
Sbjct: 592 RKNRGSSWIELSHVVHEFVMGDMSHTDSD 620



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 220/481 (45%), Gaps = 58/481 (12%)

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
           +K  K I AR   ES         N ++  Y + G  D AH++FD++ +           
Sbjct: 15  LKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQ----------- 63

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
                                       P+ + WT +I G+ +N +  +A  LF +M   
Sbjct: 64  ----------------------------PNAYLWTSLIHGYVENRQYDEAFSLFIQMRRE 95

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
            +     TI+S + A   L     G  ++   +K GF  D++V NS+++++ +C +++ A
Sbjct: 96  PISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTA 155

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
            + FD + +KD+ SWN MI+GY        A + F +M E     NV++W  +I GY++ 
Sbjct: 156 RQAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPER----NVVSWTSMICGYVKA 211

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G+  EA  LF  M   D      ASWN +++GY  +G   NA  +F KM         + 
Sbjct: 212 GDMAEAQVLFDSMPVKD-----LASWNVMVSGYMDIGDCVNARIIFGKMPIHDTGSWNIM 266

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
           I     A     A +           R    ++     ++D Y K+G+   +R +FD M 
Sbjct: 267 ISGFCKAGELESAKD--------FFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMP 318

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            K+++TW+++I GY  +G    AL+LF++ K   +KP+    L II A S  G++D  + 
Sbjct: 319 MKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAES 378

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
           +  +      ++  +  ++++ID+Y + G +E+A++  E M    D   +  ++ A   H
Sbjct: 379 IIHNYVGP-SLLSDLRVFTSLIDMYAKCGSIEKALQMFE-MAHPKDLLCYSTMIAALANH 436

Query: 683 G 683
           G
Sbjct: 437 G 437



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 1/144 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKL-HAFLNLVTEIDVFV 93
           NG+  +A+ + +    Q  K      + ++ AC     I  A  + H ++      D+ V
Sbjct: 335 NGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYVGPSLLSDLRV 394

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +YAKCG ++ A ++FE    ++L  +S MI A +     R+ + LF  M +  +
Sbjct: 395 FTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANI 454

Query: 154 FPDDFLFPKILQACGNCGDFEAGK 177
            PD   F  +L AC + G  + G+
Sbjct: 455 KPDSVTFLGVLTACNHGGLVDEGR 478



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 10/199 (5%)

Query: 503 ILSVLPACAYLVASNKVKEIHGCVL-RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           IL ++  C  L     +K IH  +L   S+ SS  V+N L+  Y++ G   Y+  +FD +
Sbjct: 5   ILHIIHNCKTL---KSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEI 61

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
           +  +   W SLI GYV +  +  A  LF QM+   +     T  S++ A +       G+
Sbjct: 62  TQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQ 121

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
            V+  + +      +I   S ++DL+ R  K++ A +  ++M  E D   W  +++    
Sbjct: 122 AVYGFVLKYGFAFDLIVQNS-VLDLFMRCRKVDTARQAFDEM-CEKDIVSWNMMISGYGN 179

Query: 682 HGNIDLAVLAIERLFDLEP 700
           +  +D+A     + FD  P
Sbjct: 180 NDRVDIA----RKFFDRMP 194


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 185/525 (35%), Positives = 295/525 (56%), Gaps = 36/525 (6%)

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN---------V 429
           +++  ++F+M+ +KD+ SWN++IAG  + G  G+   +  +M  +++ P+         +
Sbjct: 250 VDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPL 309

Query: 430 ITWNVLISG-------YIQNGNEDE---AVDLFQRMGKNDKV-----------KRNTASW 468
           I  NV IS         I+ G + E   A  L     K  +V           +R+  SW
Sbjct: 310 IAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISW 369

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           NS+IAG  Q G  +  L  FR+M  +   P   +  S++PACA+L   +  K++HG + R
Sbjct: 370 NSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 429

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
              + ++ + +SL+D YAK GNI  +R IFD M  +D+++W ++I G  LHG    A++L
Sbjct: 430 NGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIEL 489

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F+QMK+ G++PN   F++++ A S AG+VD   K F S+T  + I P +EHY+A+ DL G
Sbjct: 490 FEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLG 549

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+G+LEEA +FI  MPI P  S+W  LL+ACR+H N+D+A     R+ +++P +     L
Sbjct: 550 RAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYIL 609

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  IY+   + ++A K R   R    R +    WIEV+N VY F+ G  S    + +   
Sbjct: 610 LANIYSAARRWKEAAKWRASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREA 669

Query: 769 LQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
           ++ +      E     +S     +EEE+K+ +   HSE+LA+ F +I ++ A  TIR+ K
Sbjct: 670 MEVLMELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGII-NTPAGTTIRVTK 728

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+R+C  CH   K++S +   EI + D+   HHFKNG CSCGDYW
Sbjct: 729 NLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 773



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/502 (24%), Positives = 235/502 (46%), Gaps = 51/502 (10%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
           +LL+  +   S   A++LHA +       +   + LLS+Y+    L D+  +F  +    
Sbjct: 13  SLLRNPLSIKSRSQAQQLHAQVLKFQASSLCNLSLLLSIYSHINLLHDSLRLFNTLHFPP 72

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
              W ++I  Y+      + +  F  M+  GL+PD  +FP +L+AC    D   G+ +H 
Sbjct: 73  ALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHG 132

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKL-------IWARRFFESMDEKD-GVAWNSMISGY 233
            +I++G+       N+++ +Y K   L       + A +  + M E+   V   S++ G 
Sbjct: 133 YIIRVGLDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVGN 192

Query: 234 FQIGENDEAHRLFDKMCR-EEIKLGVVTFNILIRS-YNQLGQCDVAMEM----------- 280
                +D     +D  CR  E +  V+  +   RS Y ++  C++  ++           
Sbjct: 193 QGRKVSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMSVDS 252

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
           V+++  +    D+ +W  +I+G A+NG   + L + +EM    + P+  T++S +    +
Sbjct: 253 VRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAE 312

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
              ++ G EIH  +++ G   +V V +SLI+MY+KC  +  + RVF ++ ++D  SWNS+
Sbjct: 313 NVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSI 372

Query: 401 IAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS---------------GYIQNGNE 445
           IAG  Q G   +  + F +M  + + P   +++ ++                GYI     
Sbjct: 373 IAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGF 432

Query: 446 DEA-------VDLFQRMGK-------NDKVK-RNTASWNSLIAGYQQLGQKNNALGVFRK 490
           DE        VD++ + G         D+++ R+  SW ++I G    G   +A+ +F +
Sbjct: 433 DENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQ 492

Query: 491 MQSSCFYPNCVTILSVLPACAY 512
           M++    PN V  ++VL AC++
Sbjct: 493 MKTEGIEPNYVAFMAVLTACSH 514



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 113/476 (23%), Positives = 194/476 (40%), Gaps = 92/476 (19%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           +D  R++FE M E++L +W+ +I   +R+  + E + +   M    L PD F    +L  
Sbjct: 250 VDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPL 309

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
                D   GK +H   I+ G+     V +S++ +Y KC +++ + R F  + E+DG++W
Sbjct: 310 IAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISW 369

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------------- 261
           NS+I+G  Q G  DE  + F +M   +IK    +F                         
Sbjct: 370 NSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 429

Query: 262 -----NILIRS-----YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQ 311
                NI I S     Y + G    A ++  RM       D+ +WT MI G A +G    
Sbjct: 430 NGFDENIFIASSLVDMYAKCGNIRTARQIFDRMR----LRDMVSWTAMIMGCALHGHALD 485

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL-VGNSLI 370
           A++LF++M   G+ PN V   + ++AC+                  G  D+     NS+ 
Sbjct: 486 AIELFEQMKTEGIEPNYVAFMAVLTACS----------------HAGLVDEAWKYFNSMT 529

Query: 371 NMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
             +     +E    V D++                +AG   +AY+    M    + P   
Sbjct: 530 LDFGIAPGVEHYAAVSDLLG---------------RAGRLEEAYDFICGMP---IGPTGS 571

Query: 431 TWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
            W  L+S    + N D A  +  R+ + D   +NT ++  L+A      ++      +R 
Sbjct: 572 VWATLLSACRVHKNVDMAEKVANRILEVD--PKNTGAY-ILLANIYSAARRWKEAAKWRA 628

Query: 491 MQSSCFYPNCVTILSVLPACAYLVASNKV------KEIHGCV--LRRSLESSLPVM 538
                      T +   PAC+++   NKV       E H C   +R ++E  + +M
Sbjct: 629 SLRR-------TGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELM 677



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 148/318 (46%), Gaps = 5/318 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG   E +T++  +     K    T  ++L    ++  I   +++H   +    + +V+V
Sbjct: 278 NGLYGETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYV 337

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAKC  + D+  VF  + ER+  +W+++I    ++  + E ++ F  M+   +
Sbjct: 338 ASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKI 397

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P  + F  I+ AC +      GK +H  + + G      + +S++ +Y KCG +  AR+
Sbjct: 398 KPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQ 457

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M  +D V+W +MI G    G   +A  LF++M  E I+   V F  ++ + +  G 
Sbjct: 458 IFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGL 517

Query: 274 CDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            D A +    M    GI P V  +  +     + GR  +A D    M    + P G    
Sbjct: 518 VDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMP---IGPTGSVWA 574

Query: 333 SAISACTDLKALAMGMEI 350
           + +SAC   K + M  ++
Sbjct: 575 TLLSACRVHKNVDMAEKV 592


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 224/837 (26%), Positives = 376/837 (44%), Gaps = 145/837 (17%)

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           + + C N G     K +H+ + K G      + + ++ +Y+  G++  A + F+ +   +
Sbjct: 16  LFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSN 75

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------------------- 261
              WN +ISG        +   LF  M  E +     TF                     
Sbjct: 76  VSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIH 135

Query: 262 ---------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN 306
                          N LI  Y++ G  D+A  + +R+       D  +W  MISG +QN
Sbjct: 136 AKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERL----FLKDSVSWVAMISGLSQN 191

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           GR  +A+ LF +M    V+P     +S +SACT ++   +G ++H   VK G + +  V 
Sbjct: 192 GREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVC 251

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           N+L+ +YS+   L AAE++F  +  +D  S+NS+I+G  Q G+  +A +LF KMQ   + 
Sbjct: 252 NALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMK 311

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQ---RMGKNDKV---------------------- 461
           P+ +T   L+S     G   +   L     +MG +  +                      
Sbjct: 312 PDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEY 371

Query: 462 -----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
                  N   WN ++  Y QLG  + +  +F +MQ     PN  T  S+L  C  L A 
Sbjct: 372 FLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGAL 431

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
           +  ++IH  V++   + ++ V + LID YAK G +  +R I   +  +D+++W ++I GY
Sbjct: 432 DLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGY 491

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA-------------------------- 610
             H  +  AL LF +M++ G++ +   F S I A                          
Sbjct: 492 TQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDL 551

Query: 611 --------------HSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
                         +S  G ++  K+ F  + E       +  ++AMI  Y + G   EA
Sbjct: 552 SIGNALASNVLITLYSKCGSIEDAKREFFEMPE-----KNVVSWNAMITGYSQHGYGSEA 606

Query: 657 ME----------------FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
           +                 F+ +MPIEPD+ IW  LL+AC +H NI++   A   L +LEP
Sbjct: 607 VSLFEEMKQLGLMPNHVTFVGEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEP 666

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
            D     L+  +YA+ GK +   + R++ ++   +   G+ WIEVKN ++ F  G     
Sbjct: 667 EDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHP 726

Query: 761 YSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIG 811
            ++ +Y ++ ++ E    R+   G           +E+E+K+  + IHSEKLA+AF L+ 
Sbjct: 727 LAEQIYEYIDDLNE----RAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLS 782

Query: 812 SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +     IR++KN+R+C  CH   K+VS + +  I + D+   HHF+ G CSC DYW
Sbjct: 783 LTNT-MPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVCSCKDYW 838



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 149/557 (26%), Positives = 262/557 (47%), Gaps = 68/557 (12%)

Query: 20  SNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNS-IHLARK 78
           SN  F +  +  L      ++ + +   + T+      +T+ ++L+AC    +   +  +
Sbjct: 74  SNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQ 133

Query: 79  LHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 137
           +HA  ++        V   L+ +Y+K G +D A+ VFE +  ++  +W AMI   S++ R
Sbjct: 134 IHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGR 193

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
             E + LF  M +  + P  ++F  +L AC     F+ G+ +H  ++K G+S    V N+
Sbjct: 194 EDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNA 253

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           ++ +Y + G LI A + F  M  +D +++NS+ISG  Q G +D A +LF+KM  + +K  
Sbjct: 254 LVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPD 313

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD------------------------- 292
            VT   L+ +   +G      ++   +  +G++ D                         
Sbjct: 314 CVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFL 373

Query: 293 ------VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
                 V  W  M+  + Q G  S++  +F +M   G+MPN  T  S +  CT L AL +
Sbjct: 374 TTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDL 433

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G +IH+  +K GF  +V V + LI+MY+K  EL+ A  +   ++++DV SW +MIAGY Q
Sbjct: 434 GEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQ 493

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISG-----------------YIQNGNEDEA- 448
                +A +LF +M+   +  + I ++  IS                  YI   +ED + 
Sbjct: 494 HDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSI 553

Query: 449 ---------VDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKM 491
                    + L+ + G  +  KR        N  SWN++I GY Q G  + A+ +F +M
Sbjct: 554 GNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEM 613

Query: 492 QSSCFYPNCVTILSVLP 508
           +     PN VT +  +P
Sbjct: 614 KQLGLMPNHVTFVGEMP 630


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 199/578 (34%), Positives = 303/578 (52%), Gaps = 37/578 (6%)

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P      S I+AC   K L    +IH+      F  D  + NSLI+MY KC  +  A  V
Sbjct: 49  PTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNV 108

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI---SGYIQN 442
           FD ++ KD+ SW S+IAGY Q     +A  L   M +    PN  T+  L+     Y  +
Sbjct: 109 FDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADS 168

Query: 443 G--------------NEDEAV-----DLFQRMGKNDKV--------KRNTASWNSLIAGY 475
           G              +ED  V     D++ R GK D           +N  SWN+LI+G+
Sbjct: 169 GTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
            + G   +AL  F +M  + F     T  SV  + A L A  + K +H  V++   + + 
Sbjct: 229 ARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTA 288

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            V N+L+D YAKSG+++ +R +FD + +KD++TWNS++  +  +G    A+  F++M+  
Sbjct: 289 FVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKS 348

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           G+  N+ TFL I+ A S  G+V  GK+ F  + E Y + P I+HY  ++ L GR+G L  
Sbjct: 349 GVYLNQITFLCILTACSHGGLVKEGKRYFEMMKE-YDLEPEIDHYVTVVALLGRAGLLNY 407

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A+ FI  MP+EP +++W ALL ACR+H N  +   A + +F+L+P D     L+  IYA 
Sbjct: 408 ALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYAS 467

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN 775
            G+ + A +VR + +    +      W+E++N V+ FV    +   ++ +Y     + + 
Sbjct: 468 TGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQAEEIYKMWGEISKK 527

Query: 776 VTARS-----SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
           +          +  L ++++EKE     HSEKLALAFALI    A  TIRI+KNIR+C  
Sbjct: 528 IRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALI-EMPAGATIRIMKNIRICGD 586

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   KY+S +   EI + D+   HHF +G CSCGDYW
Sbjct: 587 CHSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 204/447 (45%), Gaps = 44/447 (9%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           Y + + AC  S ++  ARK+HA L       D F+   L+ +Y KC  + DAR VF+ MR
Sbjct: 54  YRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVFDQMR 113

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
            +++ +W+++I  Y+++    E + L   M++    P+ F F  +L+A G   D   G+ 
Sbjct: 114 RKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQ 173

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H+L +K G      V +++L +Y +CGK+  A   F+ +D K+GV+WN++ISG+ + G+
Sbjct: 174 IHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGD 233

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD----VAMEMVKRMESLGI----- 289
            + A   F +M R   +    T++ +  S  +LG  +    V   ++K  + L       
Sbjct: 234 GESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNT 293

Query: 290 ----------------------TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
                                   D+ TW  M++ FAQ G   +A+  F+EM   GV  N
Sbjct: 294 LLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLN 353

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE-AAERVF 386
            +T    ++AC+    +  G     +  +     ++    +++ +  +   L  A   +F
Sbjct: 354 QITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIF 413

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGK----AYELFIKMQESDVPPNVITWNVLISGYIQN 442
            M  +     W +++A  C+     K    A +   ++   D  P V+ +N+    Y   
Sbjct: 414 KMPMEPTAAVWGALLAA-CRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNI----YAST 468

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTA-SW 468
           G  D A  + + M K   VK+  A SW
Sbjct: 469 GQWDAAARV-RMMMKTTGVKKEPACSW 494



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 166/356 (46%), Gaps = 5/356 (1%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLL 98
           EAI +L  +     K    T+ +LL+A          R++HA  +      DV+V + LL
Sbjct: 135 EAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALL 194

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +YA+CG +D A  VF+ +  +N  +W+A+I  ++R       +  F  M+++G     F
Sbjct: 195 DMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHF 254

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
            +  +  +    G  E GK +H+ VIK        V N++L +Y K G +I AR+ F+ +
Sbjct: 255 TYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRV 314

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
           D KD V WNSM++ + Q G   EA   F++M +  + L  +TF  ++ + +  G      
Sbjct: 315 DNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGK 374

Query: 279 EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
              + M+   + P++  +  +++   + G  + AL    +M    + P      + ++AC
Sbjct: 375 RYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALVFIFKMP---MEPTAAVWGALLAAC 431

Query: 339 TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
              K   +G        ++   DD      L N+Y+   + +AA RV  M+K   V
Sbjct: 432 RMHKNAKVGQFAADHVFELD-PDDSGPPVLLYNIYASTGQWDAAARVRMMMKTTGV 486



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 153/345 (44%), Gaps = 43/345 (12%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           D+ +WT +I+G+AQN    +A+ L   M      PNG T  S + A         G +IH
Sbjct: 116 DMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIH 175

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           +LAVK G+ +DV VG++L++MY++C +++ A  VFD +  K+  SWN++I+G+ + G   
Sbjct: 176 ALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWNALISGFARKGDGE 235

Query: 412 KAYELFIKMQESDVPPNVITW-----------------------------------NVLI 436
            A   F +M  +       T+                                   N L+
Sbjct: 236 SALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQKLTAFVGNTLL 295

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
             Y ++G+  +A  +F R+   D V     +WNS++  + Q G    A+  F +M+ S  
Sbjct: 296 DMYAKSGSMIDARKVFDRVDNKDLV-----TWNSMLTAFAQYGLGKEAVSHFEEMRKSGV 350

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
           Y N +T L +L AC++     + K     +    LE  +    +++    ++G + Y+  
Sbjct: 351 YLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHYVTVVALLGRAGLLNYALV 410

Query: 557 -IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
            IF          W +L+    +H   +A +  F     F L P+
Sbjct: 411 FIFKMPMEPTAAVWGALLAACRMHK--NAKVGQFAADHVFELDPD 453


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  327 bits (839), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 197/619 (31%), Positives = 325/619 (52%), Gaps = 55/619 (8%)

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
           F+ +  +     +G+  +AL    +M+ +G         + ++ C   +A+  G  +H+ 
Sbjct: 59  FSPSPNLKTLCSSGQLKEAL---LQMAILGREVKFEGYDTILNECVSQRAIREGQRVHTH 115

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            +K  +   V +   LI +Y+KC+ L  A  +FD +  K+V SW +MI+ Y Q G+  +A
Sbjct: 116 MIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEA 175

Query: 414 YELFIKMQESDVPPNVITW-NVLISGYIQNGNE---------------------DEAVDL 451
             LF++M  SD  PN  T+  +L S Y   G E                        +D+
Sbjct: 176 LNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDM 235

Query: 452 FQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           + + G+        +   +R+  +  ++I+GY Q+G    AL +FR++Q      N VT 
Sbjct: 236 YAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTY 295

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
            SVL A + L A N  K++H  VLR    S + ++NSLID Y+K GN+ Y+R IFD M  
Sbjct: 296 ASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPE 355

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFG-LKPNRGTFLSIILAHSLAGMVDLGKK 622
           +  I+WN+++ GY  HG     L+LF  M+    +KP+  T+L+++   S   + D+G +
Sbjct: 356 RTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLE 415

Query: 623 VFCSITECYQ-IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
           +F ++      I P I HY  ++DL GR+G++EEA +FI+ MP  P ++IW +LL +CR+
Sbjct: 416 IFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRV 475

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H ++++ ++  ++L +LEP +     ++  +YA  GK ED   +R L +E       G+ 
Sbjct: 476 HSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRS 535

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS---SHSGLC---------IEE 789
           W+E+  +V+TF         SD  +   + V + V   S      G           ++E
Sbjct: 536 WVELDQIVHTF-------HASDHTHPRREEVAKKVKELSIKFKEDGYVPDLSCVLYDVDE 588

Query: 790 EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
           E+KE++   HSEKLALAF LI + +   TIR++KN+R+CV CH  AK+VS ++   + L 
Sbjct: 589 EQKEKVLLGHSEKLALAFGLIATPEGT-TIRVIKNLRICVDCHSFAKFVSRLYARTVILR 647

Query: 850 DSKCLHHFKNGQCSCGDYW 868
           D    H+   G CSCGDYW
Sbjct: 648 DKNRFHNIVGGVCSCGDYW 666



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 226/491 (46%), Gaps = 62/491 (12%)

Query: 28  HLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT 87
           +L  LC +G+L EA+     +A  G +V+   Y  +L  C+   +I   +++H  +    
Sbjct: 64  NLKTLCSSGQLKEALL---QMAILGREVKFEGYDTILNECVSQRAIREGQRVHTHMIKTC 120

Query: 88  EI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
            +  V+++T+L+ +Y KC CL DARE+F++M ++N+ +W+AMI AYS+     E + LF 
Sbjct: 121 YLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQKNVVSWTAMISAYSQRGFAFEALNLFV 180

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M++    P+ F F  IL +C     FE G+ +HS+ IK        V +S+L +Y K G
Sbjct: 181 EMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSG 240

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----- 261
           ++  A   F  + E+D VA  ++ISGY Q+G ++EA +LF ++  E +    VT+     
Sbjct: 241 RICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLT 300

Query: 262 ------------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITP 291
                                         N LI  Y++ G    A  +   M       
Sbjct: 301 ALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPE----R 356

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEI 350
              +W  M+ G++++G   + L+LFK M     V P+ +T  + +S C+  +   MG+EI
Sbjct: 357 TCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEI 416

Query: 351 HSLAV--KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS----WNSMIAGY 404
               V  K G   D+     ++++  +   +E A   FD IK          W S++ G 
Sbjct: 417 FYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA---FDFIKKMPFVPTAAIWGSLL-GS 472

Query: 405 CQAGYCGKAYELFI----KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDK 460
           C+        E+ I    K+ E + P N   + +L + Y   G  ++  ++   M +   
Sbjct: 473 CRV---HSDVEIGIIVGQKLLELE-PENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAV 528

Query: 461 VKRNTASWNSL 471
            K    SW  L
Sbjct: 529 TKEPGRSWVEL 539



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 181/389 (46%), Gaps = 46/389 (11%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           +  IL  C +      G+ +H+ +IK        +R  ++ +Y KC  L  AR  F+ M 
Sbjct: 93  YDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMP 152

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-NILIRSYNQLGQCDVAM 278
           +K+ V+W +MIS Y Q G   EA  LF +M R + +    TF  IL   Y  LG      
Sbjct: 153 QKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLG-----F 207

Query: 279 EMVKRMESLGITP-----------------------------------DVFTWTCMISGF 303
           E  +++ S+ I                                     DV   T +ISG+
Sbjct: 208 ETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGY 267

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
           AQ G   +AL LF+++   G+  N VT  S ++A + L AL  G ++HS  ++ G    V
Sbjct: 268 AQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYV 327

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
           ++ NSLI+MYSKC  +  A R+FD + ++   SWN+M+ GY + G   +  ELF  M+E 
Sbjct: 328 VLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREE 387

Query: 424 D-VPPNVITWNVLISGYIQNGNEDEAVDLFQRM-GKNDKVKRNTASWNSLIAGYQQLGQK 481
           + V P+ IT+  ++SG      ED  +++F  M    D ++ +   +  ++    + G+ 
Sbjct: 388 NKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRV 447

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             A    +KM    F P      S+L +C
Sbjct: 448 EEAFDFIKKMP---FVPTAAIWGSLLGSC 473



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 141/303 (46%), Gaps = 35/303 (11%)

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
           E  R+   M +      V     LI  YN+      A EM   M       +V +WT MI
Sbjct: 108 EGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQ----KNVVSWTAMI 163

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           S ++Q G   +AL+LF EM      PN  T  + +++C        G +IHS+A+K  + 
Sbjct: 164 SAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYE 223

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
             + VG+SL++MY+K   +  A  VF  + ++DV +  ++I+GY Q G   +A +LF ++
Sbjct: 224 SHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQL 283

Query: 421 QESDVPPNVITWNVLISGY-----IQNGNE-----------------DEAVDLFQRMGK- 457
           Q   +  N +T+  +++       + +G +                 +  +D++ + G  
Sbjct: 284 QIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNV 343

Query: 458 -------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM-QSSCFYPNCVTILSVLPA 509
                  +   +R   SWN+++ GY + G     L +F+ M + +   P+ +T L+VL  
Sbjct: 344 CYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSG 403

Query: 510 CAY 512
           C++
Sbjct: 404 CSH 406


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  327 bits (839), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 193/616 (31%), Positives = 326/616 (52%), Gaps = 49/616 (7%)

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
           F+ +  +     +G+  +AL    +M+ +G         S ++ C   +A+  G  +H+ 
Sbjct: 31  FSPSPNLKTLCSSGQLKEAL---LQMAILGREVKFEGYDSILNECVSQRAIREGQRVHTH 87

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            +K  +   V +   LI +Y+KC+ L  A  +FD +  ++V SW +MI+ Y Q G+  +A
Sbjct: 88  MIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEA 147

Query: 414 YELFIKMQESDVPPNVITW-NVLISGYIQNGNE---------------------DEAVDL 451
             LF++M  SD  PN  T+  +L S Y   G E                        +D+
Sbjct: 148 LNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDM 207

Query: 452 FQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           + + G+        +   +R+  +  ++I+GY Q+G    AL +FR++Q      N VT 
Sbjct: 208 YAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTY 267

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
            SVL A + L A N  K++H  VLR    S + ++NSLID Y+K GN+ Y+R IFD M  
Sbjct: 268 ASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPE 327

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFG-LKPNRGTFLSIILAHSLAGMVDLGKK 622
           +  I+WN+++ GY  HG     L+LF  M+    +KP+  T+L+++   S   + D+G +
Sbjct: 328 RTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLE 387

Query: 623 VFCSITECYQ-IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
           +F ++      I P I HY  ++DL GR+G++EEA +FI+ MP  P ++IW +LL +CR+
Sbjct: 388 IFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAFDFIKKMPFVPTAAIWGSLLGSCRV 447

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
           H ++++ ++  ++L +LEP +     ++  +YA  GK ED   +R L +E       G+ 
Sbjct: 448 HSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAVTKEPGRS 507

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEK 792
           W+E+  +V+TF     +  ++      + N  + ++ +    G           ++EE+K
Sbjct: 508 WVELDQIVHTF----HASDHTHPRREEVANKVKELSIKFKEDGYVPDLSCVLYDVDEEQK 563

Query: 793 EEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
           E++   HSEKLALAF LI + +   TIR++KN+R+CV CH  AK+VS ++   + L D  
Sbjct: 564 EKVLLGHSEKLALAFGLIATPEGT-TIRVIKNLRICVDCHSFAKFVSRLYARTVILRDKN 622

Query: 853 CLHHFKNGQCSCGDYW 868
             H+   G CSCGDYW
Sbjct: 623 RFHNIVGGVCSCGDYW 638



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 132/491 (26%), Positives = 226/491 (46%), Gaps = 62/491 (12%)

Query: 28  HLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT 87
           +L  LC +G+L EA+     +A  G +V+   Y ++L  C+   +I   +++H  +    
Sbjct: 36  NLKTLCSSGQLKEALL---QMAILGREVKFEGYDSILNECVSQRAIREGQRVHTHMIKTC 92

Query: 88  EI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
            +  V+++T+L+ +Y KC CL DAR +F++M +RN+ +W+AMI AYS+     E + LF 
Sbjct: 93  YLPSVYLRTRLIVLYNKCDCLGDARGMFDEMPQRNVVSWTAMISAYSQRGFAFEALNLFV 152

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M++    P+ F F  IL +C     FE G+ +HS+ IK        V +S+L +Y K G
Sbjct: 153 EMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSG 212

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----- 261
           ++  A   F  + E+D VA  ++ISGY Q+G ++EA +LF ++  E +    VT+     
Sbjct: 213 RICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEALKLFRQLQIEGMNSNSVTYASVLT 272

Query: 262 ------------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITP 291
                                         N LI  Y++ G    A  +   M       
Sbjct: 273 ALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDMYSKCGNVCYARRIFDSMPE----R 328

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEI 350
              +W  M+ G++++G   + L+LFK M     V P+ +T  + +S C+  +   MG+EI
Sbjct: 329 TCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDSITYLAVLSGCSHGQLEDMGLEI 388

Query: 351 HSLAV--KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS----WNSMIAGY 404
               V  K G   D+     ++++  +   +E A   FD IK          W S++ G 
Sbjct: 389 FYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA---FDFIKKMPFVPTAAIWGSLL-GS 444

Query: 405 CQAGYCGKAYELFI----KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDK 460
           C+        E+ I    K+ E + P N   + +L + Y   G  ++  ++   M +   
Sbjct: 445 CRV---HSDVEIGIIVGQKLLELE-PENAGNYVILSNLYASAGKWEDMRNIRDLMQEKAV 500

Query: 461 VKRNTASWNSL 471
            K    SW  L
Sbjct: 501 TKEPGRSWVEL 511



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 181/389 (46%), Gaps = 46/389 (11%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           +  IL  C +      G+ +H+ +IK        +R  ++ +Y KC  L  AR  F+ M 
Sbjct: 65  YDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMP 124

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-NILIRSYNQLGQCDVAM 278
           +++ V+W +MIS Y Q G   EA  LF +M R + +    TF  IL   Y  LG      
Sbjct: 125 QRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLG-----F 179

Query: 279 EMVKRMESLGITP-----------------------------------DVFTWTCMISGF 303
           E  +++ S+ I                                     DV   T +ISG+
Sbjct: 180 ETGRQIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGY 239

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
           AQ G   +AL LF+++   G+  N VT  S ++A + L AL  G ++HS  ++ G    V
Sbjct: 240 AQMGLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYV 299

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
           ++ NSLI+MYSKC  +  A R+FD + ++   SWN+M+ GY + G   +  ELF  M+E 
Sbjct: 300 VLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREE 359

Query: 424 D-VPPNVITWNVLISGYIQNGNEDEAVDLFQRM-GKNDKVKRNTASWNSLIAGYQQLGQK 481
           + V P+ IT+  ++SG      ED  +++F  M    D ++ +   +  ++    + G+ 
Sbjct: 360 NKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRV 419

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             A    +KM    F P      S+L +C
Sbjct: 420 EEAFDFIKKMP---FVPTAAIWGSLLGSC 445



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 126/252 (50%), Gaps = 31/252 (12%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           +V +WT MIS ++Q G   +AL+LF EM      PN  T  + +++C        G +IH
Sbjct: 127 NVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIH 186

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           S+A+K  +   + VG+SL++MY+K   +  A  VF  + ++DV +  ++I+GY Q G   
Sbjct: 187 SIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDE 246

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGY-----IQNGNE-----------------DEAV 449
           +A +LF ++Q   +  N +T+  +++       + +G +                 +  +
Sbjct: 247 EALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLI 306

Query: 450 DLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM-QSSCFYPNC 500
           D++ + G         +   +R   SWN+++ GY + G     L +F+ M + +   P+ 
Sbjct: 307 DMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVKPDS 366

Query: 501 VTILSVLPACAY 512
           +T L+VL  C++
Sbjct: 367 ITYLAVLSGCSH 378


>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
 gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 191/548 (34%), Positives = 292/548 (53%), Gaps = 56/548 (10%)

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           N L++ Y +   +  A +VFD + +++V SW +MI GY Q G   +A  LF +M E    
Sbjct: 29  NGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGLIEEAELLFWRMPER--- 85

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV------------------------- 461
            NV++W V++ G I++G  DEA  LF  M   D V                         
Sbjct: 86  -NVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEM 144

Query: 462 -KRNTASWNSLIAG-------------YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
            +RN  +W S+I+G             Y++ G +  AL +F  MQ     P+  +++SVL
Sbjct: 145 PQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVL 204

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
             C  L + +  +++H  ++R   +  + V + LI  Y K G++V ++ +FD  SSKDI+
Sbjct: 205 SVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIV 264

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
            WNS+I GY  HGF   AL++F  M S  + P+  TF+ ++ A S  G V  G ++F S+
Sbjct: 265 MWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESM 324

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
              YQ+ P  EHY+ M+DL GR+GKL EAM  IE+MP+E D+ +W ALL ACR H N+DL
Sbjct: 325 KSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDL 384

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
           A +A ++L  LEP +     L+  +Y+   + +D +++RK  R    R S G  WIEV  
Sbjct: 385 AEIAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIEVDK 444

Query: 748 LVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGI 798
            V+ F +GG S S+ +  +  +      + A    +G C         ++EEEK      
Sbjct: 445 KVHIF-SGGGSTSHPE--HEMILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSLRD 501

Query: 799 HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
           HSEKLA+A+ L+   +    IR++KN+R+C   H T K ++ +   EI L D+   HHFK
Sbjct: 502 HSEKLAVAYGLLKVPEG-MPIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDTNRFHHFK 560

Query: 859 NGQCSCGD 866
           +G CSC D
Sbjct: 561 DGLCSCSD 568



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 177/392 (45%), Gaps = 52/392 (13%)

Query: 109 DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACG 168
           +AR++F+ M E N  +W+ ++  Y                VQ+G+               
Sbjct: 12  EARKLFDKMPETNTISWNGLVSGY----------------VQNGMIS------------- 42

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
                EA K+   +  +  +S    +R      YV+ G +  A   F  M E++ V+W  
Sbjct: 43  -----EARKVFDKMPERNVVSWTAMIRG-----YVQEGLIEEAELLFWRMPERNVVSWTV 92

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
           M+ G  + G  DEA +LFD M  ++    VV    +I      G+   A E+   M    
Sbjct: 93  MLGGLIEDGRVDEARQLFDMMPVKD----VVASTNMIDGLCSEGRLIEAREIFDEMPQRN 148

Query: 289 ITP---------DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           +           D  TW+ MI  + + G   +AL LF  M   GV P+  ++ S +S C 
Sbjct: 149 VVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCG 208

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
            L +L  G ++HS  V+  F  D+ V + LI MY KC +L  A+RVFD    KD+  WNS
Sbjct: 209 SLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNS 268

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           +IAGY Q G+  KA E+F  M  S + P+ IT+  ++S     G   E +++F+ M    
Sbjct: 269 IIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKY 328

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           +V   T  +  ++    + G+ N A+ +   M
Sbjct: 329 QVDPKTEHYACMVDLLGRAGKLNEAMNLIENM 360



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 146/303 (48%), Gaps = 20/303 (6%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           ++  +L   I+   +  AR+L    +++   DV   T ++      G L +ARE+F++M 
Sbjct: 89  SWTVMLGGLIEDGRVDEARQL---FDMMPVKDVVASTNMIDGLCSEGRLIEAREIFDEMP 145

Query: 119 ERNLYTWSAMIGAYSRDQRWR-------------EVVELFFLMVQDGLFPDDFLFPKILQ 165
           +RN+  W++MI     D  W              E + LF LM ++G+ P       +L 
Sbjct: 146 QRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLS 205

Query: 166 ACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA 225
            CG+    + G+ +HS +++        V + ++ +Y+KCG L+ A+R F+    KD V 
Sbjct: 206 VCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVM 265

Query: 226 WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME 285
           WNS+I+GY Q G  ++A  +F  M    I    +TF  ++ + +  G+    +E+ + M+
Sbjct: 266 WNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMK 325

Query: 286 S-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
           S   + P    + CM+    + G+ ++A++L + M    V  + +   + + AC   K L
Sbjct: 326 SKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMP---VEADAIVWGALLGACRTHKNL 382

Query: 345 AMG 347
            + 
Sbjct: 383 DLA 385



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 180/444 (40%), Gaps = 67/444 (15%)

Query: 77  RKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQ 136
           R+     + + E +      L+S Y + G + +AR+VF+ M ERN+ +W+AMI  Y ++ 
Sbjct: 11  REARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEG 70

Query: 137 RWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRN 196
              E   LF+ M +  +     +           G  E G++  +  +   M  V+ V  
Sbjct: 71  LIEEAELLFWRMPERNVVSWTVML---------GGLIEDGRVDEARQL-FDMMPVKDVVA 120

Query: 197 SVLAVYVKC--GKLIWARRFFESMDEKDGVAWNSMISG-------------YFQIGENDE 241
           S   +   C  G+LI AR  F+ M +++ VAW SMISG             Y + G   E
Sbjct: 121 STNMIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELE 180

Query: 242 AHRLFDKMCREEIK-----------------------------------LGVVTFNILIR 266
           A  LF  M RE ++                                   + +   ++LI 
Sbjct: 181 ALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLIT 240

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            Y + G    A  +  R  S     D+  W  +I+G+AQ+G   +AL++F +M    + P
Sbjct: 241 MYIKCGDLVTAKRVFDRFSS----KDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAP 296

Query: 327 NGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAER 384
           + +T    +SAC+    +  G+EI  S+  K            ++++  +  +L EA   
Sbjct: 297 DEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNL 356

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           + +M  + D   W +++ G C+        E+  K      P N   + +L + Y     
Sbjct: 357 IENMPVEADAIVWGALL-GACRTHKNLDLAEIAAKKLLQLEPNNAGPYILLSNLYSSQSR 415

Query: 445 EDEAVDLFQRMGKNDKVKRNTASW 468
             + V+L + M   +  K    SW
Sbjct: 416 WKDVVELRKTMRAKNLRKSPGCSW 439



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 58/115 (50%), Gaps = 13/115 (11%)

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG--TFLSIILAH 611
           +R +FD M   + I+WN L+ GYV +G    A  +FD+M      P R   ++ ++I  +
Sbjct: 13  ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKM------PERNVVSWTAMIRGY 66

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
              G+++  + +F  + E   +      ++ M+      G+++EA +  + MP++
Sbjct: 67  VQEGLIEEAELLFWRMPERNVV-----SWTVMLGGLIEDGRVDEARQLFDMMPVK 116


>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 596

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 212/619 (34%), Positives = 315/619 (50%), Gaps = 56/619 (9%)

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD--- 314
           +++F+ L  S    G  D A+ ++ R  +    P VF +   I GF++  R    L    
Sbjct: 26  IISFSALDPS----GDIDYALLLLLRTST---PPTVFLFNTTIRGFSRARRPGSLLSSVL 78

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
           LF  M  + + PN  T T     C++  A  +G + H + +K  F  DV V NS+I  YS
Sbjct: 79  LFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIKNSFEMDVFVRNSIIRFYS 138

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
            C                               G    A  +F +  E DV    ++WN 
Sbjct: 139 VC-------------------------------GRLNDARWVFDESSELDV----VSWNS 163

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           +I G I+NGN  EA+ LF +M      +RN  SWN +I+GY Q GQ   AL +FR+MQ  
Sbjct: 164 MIDGCIRNGNILEALSLFSKM-----TERNDISWNMMISGYAQNGQPKEALALFREMQML 218

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              PN   ++SVL AC+ L A +    +H  + ++ +     +  +LID YAK G+I  +
Sbjct: 219 DQEPNSAILVSVLSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLA 278

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
              F     +D+  + + I G  ++G    AL LF+QMK  G+ P+  ++++++ A S A
Sbjct: 279 MQAFSTSRKRDVSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIAVLCACSHA 338

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G V+ G   F S+++ + I P ++HY+ M+DL GR+G LEEA +F+  MPI+PD+ IW A
Sbjct: 339 GWVEKGFHYFASMSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGA 398

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           LL ACR++GN ++       L + +        L+  IYA   K EDA +VRK  R    
Sbjct: 399 LLGACRVYGNAEMGQRVGSLLVESDQNHDGRYILLSNIYAESMKGEDAEQVRKTMRRRKV 458

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY-SWLQNVPE--NVTARSSHSGLC--IEE 789
               G   IEV   V+ F +G  S   ++ +Y  W + V E      R     +   +EE
Sbjct: 459 DRVPGCSLIEVAGFVHEFFSGDRSHEKTEEIYLMWEEIVKEIKKFGYREETRAVVFDVEE 518

Query: 790 EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
           EEKE + G HSEKLA+AF  +  +++  T+RIVKNIR+C  CH   K VS +   +I + 
Sbjct: 519 EEKEAVIGHHSEKLAVAFGFL-YTKSGSTLRIVKNIRICSDCHYAIKLVSKVFKRKIAIR 577

Query: 850 DSKCLHHFKNGQCSCGDYW 868
           D KC HHF+ G CSC DYW
Sbjct: 578 DRKCFHHFEEGLCSCKDYW 596



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 184/408 (45%), Gaps = 81/408 (19%)

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDG---LFPDDFLFPKILQACGNCGDFEAGK 177
            ++ ++  I  +SR +R   ++    L V+ G   L P++F F  + Q C NC  F+ G+
Sbjct: 53  TVFLFNTTIRGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGR 112

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
             H +VIK        VRNS++  Y  CG+L  AR  F+   E D V+WNSMI G  + G
Sbjct: 113 QFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSWNSMIDGCIRNG 172

Query: 238 ENDEAHRLFDKMC-REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
              EA  LF KM  R +I                                        +W
Sbjct: 173 NILEALSLFSKMTERNDI----------------------------------------SW 192

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             MISG+AQNG+  +AL LF+EM  +   PN   + S +SAC+ L AL  G  +H    K
Sbjct: 193 NMMISGYAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGALDHGCWVHCYIGK 252

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
                D ++  +LI+MY+KC  ++ A + F   + +DV ++ + I+G    G   +A +L
Sbjct: 253 KCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISGLAMNGCSEEALQL 312

Query: 417 FIKMQESDVPPNVITWNVLI-----SGYIQNGNEDEA------------------VDLFQ 453
           F +M+   + P+ +++  ++     +G+++ G    A                  VDL  
Sbjct: 313 FEQMKGEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRPELDHYACMVDLLG 372

Query: 454 RMGKNDKVKRNTAS---------WNSLIA-----GYQQLGQKNNALGV 487
           R G  ++ ++  AS         W +L+      G  ++GQ+  +L V
Sbjct: 373 RAGLLEEAEKFVASMPIKPDNVIWGALLGACRVYGNAEMGQRVGSLLV 420



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 166/374 (44%), Gaps = 47/374 (12%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED- 116
           T+  L Q C +  +  L R+ H   +    E+DVFV+  ++  Y+ CG L+DAR VF++ 
Sbjct: 94  TFTFLFQGCSNCVAFDLGRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDES 153

Query: 117 ------------------------------MRERNLYTWSAMIGAYSRDQRWREVVELFF 146
                                         M ERN  +W+ MI  Y+++ + +E + LF 
Sbjct: 154 SELDVVSWNSMIDGCIRNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFR 213

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR---VRNSVLAVYV 203
            M      P+  +   +L AC   G  + G  +H  +   G  CVR    +  +++ +Y 
Sbjct: 214 EMQMLDQEPNSAILVSVLSACSQLGALDHGCWVHCYI---GKKCVRVDSILSAALIDMYA 270

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           KCG +  A + F +  ++D  A+ + ISG    G ++EA +LF++M  E I    V++  
Sbjct: 271 KCGSIDLAMQAFSTSRKRDVSAYTAAISGLAMNGCSEEALQLFEQMKGEGISPDGVSYIA 330

Query: 264 LIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
           ++ + +  G  +        M  + GI P++  + CM+    + G   +A      M   
Sbjct: 331 VLCACSHAGWVEKGFHYFASMSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMP-- 388

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELE 380
            + P+ V   + + AC       MG  + SL V+     D   G  ++  N+Y++  + E
Sbjct: 389 -IKPDNVIWGALLGACRVYGNAEMGQRVGSLLVESDQNHD---GRYILLSNIYAESMKGE 444

Query: 381 AAERVFDMIKDKDV 394
            AE+V   ++ + V
Sbjct: 445 DAEQVRKTMRRRKV 458



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 96/219 (43%), Gaps = 13/219 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NG+  EA+ +   +     +      +++L AC    ++     +H ++      +D  +
Sbjct: 202 NGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGALDHGCWVHCYIGKKCVRVDSIL 261

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +YAKCG +D A + F   R+R++  ++A I   + +    E ++LF  M  +G+
Sbjct: 262 SAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISGLAMNGCSEEALQLFEQMKGEGI 321

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV------LAVYVKCGK 207
            PD   +  +L AC + G  E G   H       MS V  +R  +      + +  + G 
Sbjct: 322 SPDGVSYIAVLCACSHAGWVEKG--FHYFA---SMSDVHGIRPELDHYACMVDLLGRAGL 376

Query: 208 LIWARRFFESMDEK-DGVAWNSMISGYFQIGENDEAHRL 245
           L  A +F  SM  K D V W +++      G  +   R+
Sbjct: 377 LEEAEKFVASMPIKPDNVIWGALLGACRVYGNAEMGQRV 415



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 14/229 (6%)

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYA--KSGNIVYSRTIFDGMSSKD-IITWNSLI 573
            + KE H  ++   L    P +  +I   A   SG+I Y+  +    S+   +  +N+ I
Sbjct: 2   KQFKEAHTQLIINGLTHPPPSLRPIISFSALDPSGDIDYALLLLLRTSTPPTVFLFNTTI 61

Query: 574 CGYVL---HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF-CSITE 629
            G+      G   +++ LF +M    L PN  TF  +    S     DLG++     I  
Sbjct: 62  RGFSRARRPGSLLSSVLLFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIKN 121

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            +++   + +  ++I  Y   G+L +A  ++ D   E D   W +++  C  +GNI  A+
Sbjct: 122 SFEMDVFVRN--SIIRFYSVCGRLNDA-RWVFDESSELDVVSWNSMIDGCIRNGNILEAL 178

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV-RKLERENTRRNS 737
               ++   E  D+    +++  YA  G+P++AL + R+++  +   NS
Sbjct: 179 SLFSKM--TERNDI-SWNMMISGYAQNGQPKEALALFREMQMLDQEPNS 224


>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 206/691 (29%), Positives = 333/691 (48%), Gaps = 126/691 (18%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           +V+D   P+   F K+L +C         +L+H+ ++    S    ++N ++ VY KC  
Sbjct: 6   LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           L  AR+ F+ M +++   WNS+IS   + G  DEA RLF  M                  
Sbjct: 66  LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPE---------------- 109

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
                                  PD  +W  M+SGFAQ+ R  ++L+ F +M     + N
Sbjct: 110 -----------------------PDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLN 146

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             +  SA+SAC  L  L MG ++H+L  K  ++ DV +G++LI+MYSKC  +  AE VF 
Sbjct: 147 EYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFS 206

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------------- 432
            + ++++ +WNS+I  Y Q G   +A E+F++M +S + P+ +T                
Sbjct: 207 GMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKE 266

Query: 433 ---------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKV---------- 461
                                N L+  Y +    +EA  +F RM   + V          
Sbjct: 267 GLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYA 326

Query: 462 ----------------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
                           +RN  SWN+LIAGY Q G+   AL +FR ++    +P   T  +
Sbjct: 327 RAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGN 386

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           +                        L+S + V NSLID Y K G+I     +F+ M  +D
Sbjct: 387 L------------------------LKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERD 422

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
            ++WN++I GY  +G+   AL +F +M   G KP+  T + ++ A S AG+V+ G+  F 
Sbjct: 423 CVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFF 482

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
           S+ E + +IP+ +HY+ M+DL GR+G L EA   IE MP+ PD+ +W +LL AC++HGNI
Sbjct: 483 SMEE-HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNI 541

Query: 686 DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV 745
           ++   A E+L +++P +     L+  +YA  G+  D ++VRKL R+       G  WIEV
Sbjct: 542 EMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEV 601

Query: 746 KNLVYTFVTGGWSESYSDLLYSWLQNVPENV 776
           ++ V+ F+    S  +   +YS L+ + E +
Sbjct: 602 ESRVHVFLVKDKSHPHRKQIYSVLKMLTEQM 632



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 200/470 (42%), Gaps = 121/470 (25%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTE--IDVFVKTKLLSVYAKCGCLDDAREVFE 115
           + +  LL +C+ S S    R +HA + L+T+  +++F++ +L+ VY KC CLDDAR++F+
Sbjct: 16  SPFAKLLDSCLRSRSARGTRLVHARI-LMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFD 74

Query: 116 DMRERNLYT-------------------------------WSAMIGAYSRDQRWREVVEL 144
            M +RN +T                               W++M+  +++  R+ E +E 
Sbjct: 75  RMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEY 134

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           F  M ++    +++ F   L AC    D   G  +H+LV K   S    + ++++ +Y K
Sbjct: 135 FVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSK 194

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--- 261
           CG +  A   F  M E++ V WNS+I+ Y Q G   EA  +F +M    ++   VT    
Sbjct: 195 CGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASV 254

Query: 262 ---------------------------------NILIRSYNQLGQCDVAMEMVKRMESLG 288
                                            N L+  Y +  + + A  +  RM    
Sbjct: 255 VSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRN 314

Query: 289 ITPD---------------------------VFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           +  +                           V +W  +I+G+ QNG   +AL LF+ +  
Sbjct: 315 VVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKR 374

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
             + P   T  + + +                        D+ VGNSLI+MY KC  +E 
Sbjct: 375 ESIWPTHYTFGNLLKS------------------------DIFVGNSLIDMYMKCGSIED 410

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
             RVF+ +K++D  SWN++I GY Q GY  +A ++F KM      P+ +T
Sbjct: 411 GSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVT 460



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/346 (24%), Positives = 152/346 (43%), Gaps = 60/346 (17%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVF 92
           NG  +EA+ V   +   G +    T  +++ AC    ++    ++HA +    +   D+ 
Sbjct: 226 NGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLV 285

Query: 93  VKTKLLSVYAKCGCLDDAREVFE-------------------------------DMRERN 121
           +   L+ +YAKC  +++AR VF+                                M +RN
Sbjct: 286 LGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRN 345

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
           + +W+A+I  Y+++    E + LF L+ ++ ++P  + F               G L+ S
Sbjct: 346 VVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTF---------------GNLLKS 390

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
            +          V NS++ +Y+KCG +    R FE M E+D V+WN++I GY Q G   E
Sbjct: 391 DIF---------VGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAE 441

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
           A ++F KM     K   VT   ++ + +  G  +        ME  G+ P    +TCM+ 
Sbjct: 442 ALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMVD 501

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
              + G  ++A +L + M    V P+ V   S ++AC     + MG
Sbjct: 502 LLGRAGCLNEAKNLIEAMP---VNPDAVVWGSLLAACKVHGNIEMG 544



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 3/212 (1%)

Query: 80  HAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
           + F NL+   D+FV   L+ +Y KCG ++D   VFE M+ER+  +W+A+I  Y+++    
Sbjct: 382 YTFGNLLKS-DIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGA 440

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E +++F  M+  G  PD      +L AC + G  E G+     + + G+  ++     ++
Sbjct: 441 EALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGLIPLKDHYTCMV 500

Query: 200 AVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV 258
            +  + G L  A+   E+M    D V W S+++     G  +      +K+  E      
Sbjct: 501 DLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLL-EIDPWNS 559

Query: 259 VTFNILIRSYNQLGQCDVAMEMVKRMESLGIT 290
             + +L   Y +LG+    + + K M   G+T
Sbjct: 560 GPYVLLSNMYAELGRWGDVVRVRKLMRQQGVT 591


>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
          Length = 669

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 185/543 (34%), Positives = 300/543 (55%), Gaps = 12/543 (2%)

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           G++P  + +     +C     L +G +IHS   ++G   +V V +S I+MY++C   + A
Sbjct: 7   GLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDA 66

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP-PNVITWNVLISGYIQ 441
            ++F+ ++ +DV SWN+MI+G+  AG  G+A ++F ++     P P+  T   ++    +
Sbjct: 67  YQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGK 126

Query: 442 NGNEDEAVDLFQRMGKNDKVK-RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
              ED A+      G  D+++ +   SWN+++A Y        A+ +F +MQ     P+ 
Sbjct: 127 ARVEDIAL----LKGVFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDA 182

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           VT+ +VLP+C  + A +  K IH  + RR + SS+ + N+L+D YA  G +  +R +FD 
Sbjct: 183 VTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDS 242

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           M ++D+++W S+I  Y  HG    A+DLF++M   GL+P+   F++I+ A S AG++D+G
Sbjct: 243 MGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMG 302

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
           K  F S+T  + I P +EHY+ M+DL GR+G + EA +FI  MPI+P+  +W ALL ACR
Sbjct: 303 KHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMVMPIKPNERVWGALLGACR 362

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           IH N+D+ +LA + L  L P       L+  IYA  G+  D   VR +      +   G 
Sbjct: 363 IHSNMDIGLLAADSLLRLAPKQTGYYVLLSNIYARAGRWADVSMVRSVMESKGIKKLPGV 422

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGL-----CIEEEEKEEI 795
              E+ + V+TF  G  S   S ++Y  L  +   +     +  +      +EEE+KE  
Sbjct: 423 SNAELGDRVHTFHIGDTSHPQSKMIYKKLSELLRRIREMGYNPEVEATLHDVEEEDKEGH 482

Query: 796 SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
             +HSEKLA+AF LI ++     IRI  N+R C  CH  AK +S +   EI L D   +H
Sbjct: 483 LSVHSEKLAIAFLLINTNPGT-PIRITMNLRTCSDCHHAAKLISTIAGREIILKDVNRIH 541

Query: 856 HFK 858
           + K
Sbjct: 542 YMK 544



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 152/307 (49%), Gaps = 7/307 (2%)

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           GL P     P   ++C        G+ +HS   +LG+     V +S +++Y +CG+   A
Sbjct: 7   GLLPGPLHLPVGFKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDA 66

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI-KLGVVTFNILIRSYNQ 270
            + FE M  +D V+WN+MISG+   G    A  +F ++   +  K    T   ++ S  +
Sbjct: 67  YQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELVALQCPKPDAGTMASILPSMGK 126

Query: 271 LGQCDVAM--EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
               D+A+   +   M   G+     +W  M++ +  N    +A++LF  M   G+ P+ 
Sbjct: 127 ARVEDIALLKGVFDEMRFKGL----ISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDA 182

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
           VT+ + + +C ++ AL++G  IH +  +      +L+ N+L++MY+ C  L+ A  VFD 
Sbjct: 183 VTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDS 242

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           +  +DV SW S+I+ Y + G+  +A +LF KM    + P+ I +  +++     G  D  
Sbjct: 243 MGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIAFVAILAACSHAGLLDMG 302

Query: 449 VDLFQRM 455
              F  M
Sbjct: 303 KHYFYSM 309



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 126/271 (46%), Gaps = 10/271 (3%)

Query: 75  LARKLHAFLNLVT----EIDVFVKTKLLSVYAKCGCLDDA--REVFEDMRERNLYTWSAM 128
             R +  F  LV     + D      +L    K    D A  + VF++MR + L +W+AM
Sbjct: 94  FGRAMDVFRELVALQCPKPDAGTMASILPSMGKARVEDIALLKGVFDEMRFKGLISWNAM 153

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM 188
           +  Y+ ++   E VELF  M +DG+ PD      +L +CG       GK +H ++ +  M
Sbjct: 154 LAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRM 213

Query: 189 SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
                + N+++ +Y  CG L  AR  F+SM  +D V+W S+IS Y + G   EA  LF+K
Sbjct: 214 CSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEK 273

Query: 249 MCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNG 307
           MC + ++   + F  ++ + +  G  D+       M S   I P +  + CM+    + G
Sbjct: 274 MCGQGLEPDSIAFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAG 333

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
              +A D    M    + PN     + + AC
Sbjct: 334 CIREAYDFIMVMP---IKPNERVWGALLGAC 361



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 149/317 (47%), Gaps = 66/317 (20%)

Query: 64  LQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
            ++C  ++ + L R++H+    L  + +VFV    +S+YA+CG  DDA ++FE+M+ R++
Sbjct: 19  FKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDV 78

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            +W+AMI  ++    +   +++F  +V              LQ    C   +AG  M S+
Sbjct: 79  VSWNAMISGFAHAGLFGRAMDVFRELVA-------------LQ----CPKPDAGT-MASI 120

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           +  +G +   RV +  L   V           F+ M  K  ++WN+M++ Y     + EA
Sbjct: 121 LPSMGKA---RVEDIALLKGV-----------FDEMRFKGLISWNAMLAVYTNNEMHVEA 166

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM---EMVKR---------------- 283
             LF +M ++ I+   VT   ++ S  ++    +     E++KR                
Sbjct: 167 VELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALMDM 226

Query: 284 -------------MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
                         +S+G T DV +WT +IS + ++G   +A+DLF++M   G+ P+ + 
Sbjct: 227 YANCGCLKEARDVFDSMG-TRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSIA 285

Query: 331 ITSAISACTDLKALAMG 347
             + ++AC+    L MG
Sbjct: 286 FVAILAACSHAGLLDMG 302



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 94/191 (49%), Gaps = 19/191 (9%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFVKTKLL 98
           EA+ +   +   G +    T   +L +C + +++ L +++H  +        + ++  L+
Sbjct: 165 EAVELFMRMQKDGIEPDAVTLATVLPSCGEVSALSLGKRIHEVIKRRRMCSSMLLENALM 224

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +YA CGCL +AR+VF+ M  R++ +W+++I AY R    RE ++LF  M   GL PD  
Sbjct: 225 DMYANCGCLKEARDVFDSMGTRDVVSWTSIISAYGRHGHGREAIDLFEKMCGQGLEPDSI 284

Query: 159 LFPKILQACGNCGDFEAG---------------KLMH--SLVIKLGMS-CVRRVRNSVLA 200
            F  IL AC + G  + G               KL H   +V  LG + C+R   + ++ 
Sbjct: 285 AFVAILAACSHAGLLDMGKHYFYSMTSEFHIAPKLEHYACMVDLLGRAGCIREAYDFIMV 344

Query: 201 VYVKCGKLIWA 211
           + +K  + +W 
Sbjct: 345 MPIKPNERVWG 355


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  327 bits (838), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 205/666 (30%), Positives = 330/666 (49%), Gaps = 79/666 (11%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           +  ++ AC +    E G+ +H  ++         ++N +L++Y KCG L  AR  F+SM 
Sbjct: 101 YTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMP 160

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCR--------------------EEIKLG-- 257
            K+ V+W SMISGY + GE D A  L+ +M R                    ++ KL   
Sbjct: 161 LKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQ 220

Query: 258 -------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFA 304
                        ++  N LI  Y +  Q   A+ +  R+    I  D+ +W  MI+GF+
Sbjct: 221 LHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRI----IIKDLISWGSMIAGFS 276

Query: 305 QNGRTSQALDLFKEMSFVGV-MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
           Q G   +AL  F+EM    V  PN     SA SAC+ L     G +IH L +K G   D+
Sbjct: 277 QLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDL 336

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
             G SL +MY+KC  LE+A  VF  I+  D+ +WN++IAG+       ++   F +M+ +
Sbjct: 337 FAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHT 396

Query: 424 DVPPNVIT-----------------------------------WNVLISGYIQNGNEDEA 448
            + PN +T                                    N L+S Y +  N ++A
Sbjct: 397 GLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDA 456

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
           + +F+ +G     K +  SWN+L+    Q  Q    L + + M +S   P+ VT+ +VL 
Sbjct: 457 LQVFEDIGN----KADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLV 512

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT 568
           +   + +     +IH  +++  L   + V N+LI+ Y K G++  +R +FD + + DII+
Sbjct: 513 SSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIIS 572

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT 628
           W+SLI GY   G    A +LF  M+  G+KPN  TF+ I+ A S  GMV+ G K++ ++ 
Sbjct: 573 WSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQ 632

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
           E Y+I P  EH S M+DL  R+G L+ A +FI+ MP  PD  +W+ LL AC++HGN+++ 
Sbjct: 633 EDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVG 692

Query: 689 VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL 748
             A E +  ++P +     ++  I+A  G  +D  ++R   R        GQ WIE+K+ 
Sbjct: 693 KRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDK 752

Query: 749 VYTFVT 754
           V+ F+ 
Sbjct: 753 VHVFLA 758



 Score =  240 bits (612), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 169/637 (26%), Positives = 289/637 (45%), Gaps = 95/637 (14%)

Query: 25  RDTHLDFLCGNGRLNEAITVLDSIAT-QGAKVRRNTYINLLQACIDSNSIHLARKLHA-F 82
            D  +  LC      EA+   D       + ++  TY +L+ AC    S+   RK+H   
Sbjct: 65  HDDKIISLCKKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHM 124

Query: 83  LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
           L    + D+ ++  +LS+Y KCG L +AR +F+ M  +N+ +W++MI  YSR       +
Sbjct: 125 LTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAI 184

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
            L+  M++ G  PD F F  I+++C    DF+  + +H+ V+K         +N+++++Y
Sbjct: 185 TLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMY 244

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA-------------------- 242
            K  ++  A   F  +  KD ++W SMI+G+ Q+G   EA                    
Sbjct: 245 TKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVF 304

Query: 243 -------HRLFDKMCREEIKLGVVTFNI---------LIRSYNQLGQCDVAMEMVKRMES 286
                   +L +  C  +I    + F +         L   Y + G  + A  +   +E 
Sbjct: 305 GSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEK 364

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
               PD+  W  +I+GFA      ++   F +M   G++PN VT+ S + AC++   L  
Sbjct: 365 ----PDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNH 420

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIAGYC 405
           G+++HS  VKMGF  D+ V NSL++MYSKC  L  A +VF+ I +K D+ SWN+++    
Sbjct: 421 GIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACL 480

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITW--------------------------------- 432
           Q    G+   L   M  S + P+ +T                                  
Sbjct: 481 QQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDIS 540

Query: 433 --NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
             N LI+ Y + G+ + A  +F  +G  D +     SW+SLI GY Q G    A  +FR 
Sbjct: 541 VSNALINMYTKCGSLECARKMFDSIGNPDII-----SWSSLIVGYAQAGCGKEAFELFRT 595

Query: 491 MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS------LIDT 544
           M+     PN +T + +L AC+++     V+E  G  L R+++    +  +      ++D 
Sbjct: 596 MRGLGVKPNEITFVGILTACSHI---GMVEE--GLKLYRTMQEDYRISPTKEHCSCMVDL 650

Query: 545 YAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
            A++G +  +      M    D++ W +L+    +HG
Sbjct: 651 LARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHG 687



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 100/197 (50%), Gaps = 8/197 (4%)

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID 543
           A  +F+K  SS      VT   ++ AC+ L +    ++IH  +L  + +  + + N ++ 
Sbjct: 84  AFDIFQKCSSSPL--KSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILS 141

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGT 603
            Y K G++  +R +FD M  K++++W S+I GY  +G    A+ L+ QM   G  P+  T
Sbjct: 142 MYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFT 201

Query: 604 FLSIILAHSLAGMVD--LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
           F SI+   S +G+ D  L +++   + +      +I   +A+I +Y +  ++ +A+    
Sbjct: 202 FGSIV--KSCSGLDDFKLARQLHAHVLKSEFGADLIAQ-NALISMYTKFSQMADAINVFS 258

Query: 662 DMPIEPDSSIWEALLTA 678
            + I+ D   W +++  
Sbjct: 259 RIIIK-DLISWGSMIAG 274


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 184/619 (29%), Positives = 325/619 (52%), Gaps = 47/619 (7%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P +F W  +I G+++N     AL ++  M    V P+  T    + AC+ L  L MG  +
Sbjct: 82  PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD--MIKDKDVYSWNSMIAGYCQAG 408
           H+   ++GF  DV V N LI +Y+KC  L +A  VF+   + ++ + SW ++++ Y Q G
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGY--IQNGNEDEAVD---------------- 450
              +A E+F +M++ DV P+ +    +++ +  +Q+  +  ++                 
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261

Query: 451 ----LFQRMGKN-------DKVKR-NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
               ++ + G+        DK+K  N   WN++I+GY + G    A+ +F +M +    P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           + ++I S + ACA + +  + + ++  V R      + + ++LID +AK G++  +R +F
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           D    +D++ W+++I GY LHG    A+ L+  M+  G+ PN  TFL +++A + +GMV 
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            G   F  + + ++I P  +HY+ +IDL GR+G L++A E I+ MP++P  ++W ALL+A
Sbjct: 442 EGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
           C+ H +++L   A ++LF ++P +      +  +YA     +   +VR   +E       
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560

Query: 739 GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEE 789
           G  W+EV+  +  F  G  S       Y  ++   E + +R    G           + +
Sbjct: 561 GCSWVEVRGRLEAFRVGDKSHPR----YEEIERQVEWIESRLKEGGFVANKDASLHDLND 616

Query: 790 EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
           EE EE    HSE++A+A+ LI + Q    +RI KN+R CV+CH   K +S +   EI + 
Sbjct: 617 EEAEETLCSHSERIAIAYGLISTPQGT-PLRITKNLRACVNCHAATKLISKLVDREIVVR 675

Query: 850 DSKCLHHFKNGQCSCGDYW 868
           D+   HHFK+G CSCGDYW
Sbjct: 676 DTNRFHHFKDGVCSCGDYW 694



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 232/472 (49%), Gaps = 46/472 (9%)

Query: 77  RKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           +++HA  L L  +   F+ TKL+   +  G +  AR+VF+D+    ++ W+A+I  YSR+
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
             +++ + ++  M    + PD F FP +L+AC      + G+ +H+ V +LG      V+
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 196 NSVLAVYVKCGKLIWARRFFESMD--EKDGVAWNSMISGYFQIGENDEAHRLFDKM---- 249
           N ++A+Y KC +L  AR  FE +   E+  V+W +++S Y Q GE  EA  +F +M    
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217

Query: 250 ----------------CREEIKLG------VVTFNILIRS---------YNQLGQCDVAM 278
                           C +++K G      VV   + I           Y + GQ   A 
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 279 EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
            +  +M+S    P++  W  MISG+A+NG   +A+D+F EM    V P+ ++ITSAISAC
Sbjct: 278 ILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISAC 333

Query: 339 TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN 398
             + +L     ++    +  + DDV + ++LI+M++KC  +E A  VFD   D+DV  W+
Sbjct: 334 AQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWS 393

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           +MI GY   G   +A  L+  M+   V PN +T+  L+     +G   E    F RM  +
Sbjct: 394 AMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-D 452

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            K+      +  +I    + G  + A  V + M      P      ++L AC
Sbjct: 453 HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP---VQPGVTVWGALLSAC 501



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 187/414 (45%), Gaps = 68/414 (16%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE-- 115
           T+ +LL+AC   + + + R +HA    L  + DVFV+  L+++YAKC  L  AR VFE  
Sbjct: 121 TFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGL 180

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            + ER + +W+A++ AY+++    E +E+F  M +  + PD      +L A     D + 
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQ 240

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G+ +H+ V+K+G+     +  S+  +Y KCG++  A+  F+ M   + + WN+MISGY +
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF- 294
            G   EA  +F +M  ++++   ++    I +  Q+G  + A  M + +       DVF 
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360

Query: 295 ------------------------------TWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
                                          W+ MI G+  +GR  +A+ L++ M   GV
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            PN VT    + AC            HS  V+ G+     + +  IN      + +    
Sbjct: 421 HPNDVTFLGLLMACN-----------HSGMVREGWWFFNRMADHKIN-----PQQQHYAC 464

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           V D++                +AG+  +AYE+   M    V P V  W  L+S 
Sbjct: 465 VIDLLG---------------RAGHLDQAYEVIKCMP---VQPGVTVWGALLSA 500



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 163/362 (45%), Gaps = 14/362 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG   EA+ +   +     K      +++L A      +   R +HA  + +  EI+  +
Sbjct: 200 NGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L ++YAKCG +  A+ +F+ M+  NL  W+AMI  Y+++   RE +++F  M+   +
Sbjct: 260 LISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD       + AC   G  E  + M+  V +        + ++++ ++ KCG +  AR 
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+   ++D V W++MI GY   G   EA  L+  M R  +    VTF  L+ + N  G 
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGM 439

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
                    RM    I P    + C+I    + G   QA ++ K M    V P GVT+  
Sbjct: 440 VREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP---VQP-GVTVWG 495

Query: 334 A-ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           A +SAC   + + +G      A +  F+ D     S    Y +   L AA R++D + + 
Sbjct: 496 ALLSACKKHRHVELG----EYAAQQLFSID----PSNTGHYVQLSNLYAAARLWDRVAEV 547

Query: 393 DV 394
            V
Sbjct: 548 RV 549



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
           ++K+IH  +L   L+ S  ++  LI   +  G+I ++R +FD +    I  WN++I GY 
Sbjct: 36  QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPM 636
            +  +  AL ++  M+   + P+  TF  ++ A S    + +G+ V   +    +     
Sbjct: 96  RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI--WEALLTACRIHGNI--DLAVLAI 692
           ++  + +I LY +  +L  A    E +P+ P+ +I  W A+++A   +G     L + + 
Sbjct: 156 VQ--NGLIALYAKCRRLGSARTVFEGLPL-PERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212

Query: 693 ERLFDLEP 700
            R  D++P
Sbjct: 213 MRKMDVKP 220


>gi|449445033|ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 194/587 (33%), Positives = 307/587 (52%), Gaps = 50/587 (8%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P    +  MI  +A+ G   + +  +  M   G   +  T    + +  +L ++ MG  +
Sbjct: 134 PSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGKCV 193

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H L +++G   D+ V  SLI +Y KC E+  A +VFD +  +DV S              
Sbjct: 194 HGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSS-------------- 239

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
                                WN L++GY ++G  D A+ +F+RM       RN  SW +
Sbjct: 240 ---------------------WNALLAGYTKSGCIDAALAIFERM-----PWRNIVSWTT 273

Query: 471 LIAGYQQLGQKNNALGVFRKM--QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           +I+GY Q G    AL +F +M  + S   PN VTI+SVLPACA L    + ++IH    R
Sbjct: 274 MISGYSQSGLAQQALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELACR 333

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS--SKDIITWNSLICGYVLHGFWHAAL 586
             L S+  V+ +L   YAK G++V +R  FD ++   K++I WN++I  Y  +G    A+
Sbjct: 334 MGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQAV 393

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
             F +M   G++P+  TF  ++   S +G+VD+G K F  ++  Y I P +EHY+ + DL
Sbjct: 394 STFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHMSTTYSINPRVEHYACVADL 453

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GR+G+L EA + + +MP+    SIW +LL ACR H N+++A  A  +LF LEP +    
Sbjct: 454 LGRAGRLAEASKLVGEMPMPAGPSIWGSLLAACRKHRNLEMAETAARKLFVLEPENTGNY 513

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
            L+  +YA  G+ ++  K+R + +    + S G  WIE+    + F+ G  S      +Y
Sbjct: 514 VLLSNMYAEAGRWQEVDKLRAIVKSQGTKKSPGCSWIEINGKAHMFLGGDTSHPQGKEIY 573

Query: 767 SWLQNVPENVTAR-----SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRI 821
            +L+ +PE + A      +S+    I EEEKE     HSEKLA+AF ++ ++ A   +R+
Sbjct: 574 MFLEALPEKMKAAGYFPDTSYVLHDISEEEKEFNLIAHSEKLAVAFGIL-NTPAETVLRV 632

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            KN+R+C  CH    ++S ++  E+ + D    HHFK G CSCGDYW
Sbjct: 633 TKNLRICGDCHTAMVFISEIYGREVIVRDINRFHHFKGGCCSCGDYW 679



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 193/402 (48%), Gaps = 44/402 (10%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           +Y  + Q     N + L  ++HA + L   +    V +K+++ YA  G +D +  VF  +
Sbjct: 72  SYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSSVSVFNGI 131

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            E +   +++MI AY+R       V  +F M   G   D F FP +L++         GK
Sbjct: 132 GEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVELLSVWMGK 191

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H L++++G+     V  S++ +Y KCG++  A + F++M  +D  +WN++++GY + G
Sbjct: 192 CVHGLILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSG 251

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
             D A  +F++M    I    V++  +I  Y+Q                           
Sbjct: 252 CIDAALAIFERMPWRNI----VSWTTMISGYSQ--------------------------- 280

Query: 298 CMISGFAQNGRTSQALDLFKEM--SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
              SG AQ     QAL LF EM     GV PN VTI S + AC  L  L  G +IH LA 
Sbjct: 281 ---SGLAQ-----QALSLFDEMVKEDSGVRPNWVTIMSVLPACAQLSTLERGRQIHELAC 332

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI--KDKDVYSWNSMIAGYCQAGYCGKA 413
           +MG   +  V  +L  MY+KC  L  A   FD +   +K++ +WN+MI  Y   G+  +A
Sbjct: 333 RMGLNSNASVLIALTAMYAKCGSLVDARNCFDKLNRNEKNLIAWNTMITAYASYGHGLQA 392

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
              F +M ++ + P+ IT+  L+SG   +G  D  +  F  M
Sbjct: 393 VSTFREMIQAGIQPDDITFTGLLSGCSHSGLVDVGLKYFNHM 434



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 9/203 (4%)

Query: 498 PNCVTILSVLPACAYLVASNKVK---EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
           P    ILS  P   +L   N +K   ++H  +L R L+ +  V + ++  YA SG+I  S
Sbjct: 65  PGPPPILSYAPVFQFLTGLNMLKLGHQVHAHMLLRGLQPTALVGSKMVAFYASSGDIDSS 124

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
            ++F+G+     + +NS+I  Y  +GF    +  +  M S+G   +  TF  ++ +    
Sbjct: 125 VSVFNGIGEPSSLLFNSMIRAYARYGFAERTVATYFSMHSWGFTGDYFTFPFVLKSSVEL 184

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHY--SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
             V +GK V   I    +I    + Y  +++I LYG+ G++ +A +  ++M I  D S W
Sbjct: 185 LSVWMGKCVHGLI---LRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIR-DVSSW 240

Query: 673 EALLTACRIHGNIDLAVLAIERL 695
            ALL      G ID A+   ER+
Sbjct: 241 NALLAGYTKSGCIDAALAIFERM 263


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 214/647 (33%), Positives = 333/647 (51%), Gaps = 46/647 (7%)

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPD--VFTWTCMISGFAQNGRTSQALDLFKE 318
           +N L+  Y++L + + A  +      L +TP+  V TWT +I+G  QNGR + AL  F  
Sbjct: 45  YNHLVNMYSKLDRPNSAQLL------LSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSN 98

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M    + PN  T   A  A   L++  +G ++H+LAVK G   DV VG S  +MYSK   
Sbjct: 99  MRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKAGL 158

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS- 437
            E A ++FD + ++++ +WN+ ++     G    A   FI+ +     PN+IT+   ++ 
Sbjct: 159 TEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNA 218

Query: 438 --------------GYI-QNGNEDE---AVDLFQRMGKNDKV-----------KRNTASW 468
                         G++ Q+G E +   A  L    GK  +V           K N  SW
Sbjct: 219 CAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSW 278

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
            S+I  Y Q  ++  A  VF + +     P    + SVL ACA L      K +H   ++
Sbjct: 279 CSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVK 338

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
             +  ++ V ++L+D Y K G+I  +   FD M  ++++TWN++I GY   G    A+ L
Sbjct: 339 ACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTL 398

Query: 589 FDQMK--SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
           FD+M   S  + PN  TF+ ++ A S AG V++G ++F S+   Y I P  EHY+ ++DL
Sbjct: 399 FDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDL 458

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GR+G +E+A +FI+ MPI P  S+W ALL A ++ G  +L  +A + LF+L+P D    
Sbjct: 459 LGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNH 518

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
            L+  ++A  G+ E+A  VRK  ++   +   G  WI   N V+ F     S   +  + 
Sbjct: 519 VLLSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQ 578

Query: 767 SWLQNVPENVTAR-----SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRI 821
           + L  +   + A      +S +   +EEEEK      HSEK+ALAF LI S  A   IRI
Sbjct: 579 AMLAKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLI-SIPAGVPIRI 637

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            KN+R+C  CH   K++S +   EI + D+   H F++ QCSC DYW
Sbjct: 638 TKNLRICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 218/469 (46%), Gaps = 35/469 (7%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           N+  +L+++ + +    L R  HA +   L   +  F+   L+++Y+K    + A+ +  
Sbjct: 7   NSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLS 66

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
               R++ TW+A+I    ++ R+   +  F  M +D + P+DF FP   +A G+      
Sbjct: 67  LTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLV 126

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           GK +H+L +K G      V  S   +Y K G    AR+ F+ M E++   WN+ +S    
Sbjct: 127 GKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVL 186

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIR-----SYNQLG------------QCDVA- 277
            G  D+A   F +   E  +  ++TF   +      SY +LG            + DV+ 
Sbjct: 187 EGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSV 246

Query: 278 ----MEMVKRMESLGIT---------PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
               ++   +   +G +         P+  +W  MI  + QN    +A  +F      G+
Sbjct: 247 ANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGI 306

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            P    ++S +SAC  L  L +G  +H+LAVK     ++ VG++L++MY KC  +E AER
Sbjct: 307 EPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAER 366

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ--ESDVPPNVITWNVLISGYIQN 442
            FD + ++++ +WN+MI GY   G    A  LF +M      V PN +T+  ++S   + 
Sbjct: 367 AFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRA 426

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           G+ +  +++F+ M     ++     +  ++    + G    A    +KM
Sbjct: 427 GSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKM 475



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 155/351 (44%), Gaps = 36/351 (10%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFV 93
           NGR   A+    ++     +    T+    +A     S  + +++HA      +I DVFV
Sbjct: 86  NGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFV 145

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
                 +Y+K G  ++AR++F++M ERN+ TW+A +     + R+ + +  F     +G 
Sbjct: 146 GCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGW 205

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+   F   L AC        G+ +H  V++ G      V N ++  Y KC ++  +  
Sbjct: 206 EPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEI 265

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK------------------ 255
            F  + + + V+W SMI  Y Q  E ++A  +F +  +E I+                  
Sbjct: 266 IFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSV 325

Query: 256 ---------LGV---VTFNILIRS--YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                    L V   V  NI + S   +  G+C  ++E  +R        ++ TW  MI 
Sbjct: 326 LEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCG-SIEDAERAFDEMPERNLVTWNAMIG 384

Query: 302 GFAQNGRTSQALDLFKEMSFVG--VMPNGVTITSAISACTDLKALAMGMEI 350
           G+A  G+   A+ LF EM+     V PN VT    +SAC+   ++ +GMEI
Sbjct: 385 GYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEI 435



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 4/165 (2%)

Query: 529 RSLESSLP--VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           ++L++ LP  + N L++ Y+K      ++ +     ++ ++TW +LI G V +G + +AL
Sbjct: 34  KTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSAL 93

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
             F  M+   ++PN  TF     A        +GK+V     +  QI  +    SA  D+
Sbjct: 94  FHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSA-FDM 152

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
           Y ++G  EEA +  ++MP E + + W A L+   + G  D A+ A
Sbjct: 153 YSKAGLTEEARKMFDEMP-ERNIATWNAYLSNSVLEGRYDDALTA 196


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 234/783 (29%), Positives = 378/783 (48%), Gaps = 89/783 (11%)

Query: 160 FPKILQACGNCGDFEAGK-----LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           F  +++ C N   +  G+     ++ SLV  L +    R+ N++L+++V+ G +  A   
Sbjct: 36  FVALIRLCENKRGYSEGEYVWKAVLSSLVTLLSV----RLGNALLSMFVRFGDVGNAWNV 91

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F  M E+D  +WN ++ GY + G  DEA  L+ ++    I+  V TF  ++RS      C
Sbjct: 92  FGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRS------C 145

Query: 275 DVAMEMVKRMESLG-------------------------------------ITPDVFTWT 297
             AM++V+  E                                         T D  +W 
Sbjct: 146 AGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWN 205

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            MISG+ +N    + L+LF  M  + + P+ +T+TS ISAC  L    +G ++HS  V+ 
Sbjct: 206 AMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRT 265

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            +  ++ V NSLI MY      + AE VF  ++ +DV SW ++I+G        KA E +
Sbjct: 266 AYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETY 325

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEA----------------------VDLFQRM 455
             M+ +   P+ +T   ++S     G  D                        +D++ + 
Sbjct: 326 KTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKC 385

Query: 456 GKNDKV--------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
            + +K          ++  SW S+I G +   +   AL  FRKM      PN VT++S L
Sbjct: 386 KRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISAL 444

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
            ACA + A    KEIH   L+  +     + N+++D Y + G +  +   F+ ++ KD+ 
Sbjct: 445 SACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKDVG 503

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
            WN L+ GY   G     ++LF +M    + P+  TF+S++ A S +GMV  G + F  +
Sbjct: 504 AWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRM 563

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
              Y I P ++HY+ ++DL GR+GKL EA EFIE MPI+PD +IW ALL ACRIH ++ L
Sbjct: 564 KVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLL 623

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
             LA + +F  +   +    L+  +YA  GK ++  KVR+  +E       G  W+EVK 
Sbjct: 624 GELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKG 683

Query: 748 LVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIE----EEEKEEISGIHSEKL 803
            V+ F++G         +   L+   E +     +   C      +  K +I   HSE+ 
Sbjct: 684 KVHAFLSGDNFHPQMQEINVVLEGFYEKMKTSGFNGQECSSMDGIQTSKADIFCGHSERQ 743

Query: 804 ALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCS 863
           A+A++LI S+     I + KN+ MC  CH T K++S +   EI + D++  HHFK+G CS
Sbjct: 744 AIAYSLINSAPG-MPIWVTKNLYMCQSCHSTVKFISKIVRREISVRDTEQFHHFKDGLCS 802

Query: 864 CGD 866
           CGD
Sbjct: 803 CGD 805



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 175/611 (28%), Positives = 295/611 (48%), Gaps = 63/611 (10%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKL--HAFLNLVTEI 89
           LC +G L +A+  L S+      V  + ++ L++ C +         +      +LVT +
Sbjct: 8   LCLSGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLVTLL 67

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
            V +   LLS++ + G + +A  VF  M ER+L++W+ ++G Y++   + E + L+  ++
Sbjct: 68  SVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRIL 127

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             G+ PD + FP +L++C    D   G+ +H+ V++        V N+++ +YVKCG ++
Sbjct: 128 WAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVV 187

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI--------------- 254
            AR  F+ M  +D ++WN+MISGYF+  E  E   LF +M    I               
Sbjct: 188 SARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACE 247

Query: 255 -----KLGVVTFNILIRS--------YNQLGQCDVAMEMVKRMESL--GIT-PDVFTWTC 298
                +LG    + ++R+        YN L Q  +++   K  ES+  G+   DV +WT 
Sbjct: 248 LLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTT 307

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           +ISG   N    +AL+ +K M   G MP+ VTI S +SAC  L  L MGM++H LA + G
Sbjct: 308 IISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTG 367

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
               V+V NSLI+MYSKC+ +E A  +F  I DKDV SW S+I G      C +A   F 
Sbjct: 368 HILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFR 427

Query: 419 KMQESDVPPNVITWNVLIS----GYIQNGNEDEA-----------------VDLFQRMGK 457
           KM     P +V   + L +    G +  G E  A                 +DL+ R G+
Sbjct: 428 KMILKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGR 487

Query: 458 NDKV-------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                      +++  +WN L+ GY Q G+    + +F++M  S   P+ VT +S+L AC
Sbjct: 488 MRTALNQFNLNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCAC 547

Query: 511 AYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIIT 568
           +   + +  ++      +   +  +L     ++D   ++G +  +    + M  K D   
Sbjct: 548 SRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAI 607

Query: 569 WNSLICGYVLH 579
           W +L+    +H
Sbjct: 608 WGALLNACRIH 618


>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
 gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 191/555 (34%), Positives = 297/555 (53%), Gaps = 46/555 (8%)

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           M    V+P+  T +  + AC  L  +  G  IH L  K+GF  ++ + N ++N+Y  C E
Sbjct: 1   MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           +                               G A  LF KM + D     +TWN++I+ 
Sbjct: 61  M-------------------------------GDAMLLFEKMPQRDA----VTWNIVIAQ 85

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
             + G+ D A   F RM       +N  SW S+I+G+ Q G+ N A+ +F K++     P
Sbjct: 86  LAKRGDIDGAYGFFLRMPN-----KNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRP 140

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           N VT++SVL ACA L   +  + +H    +   + ++ V N+LID Y K G +  +R +F
Sbjct: 141 NEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVF 200

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
             M  + +++W+++I G  +HG    AL LF +M   G+KPN  TF+ ++ A S  G++D
Sbjct: 201 YEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLID 260

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            G++ F S+T  Y +IP IEHY  ++DL+ R+G LEEA EFI  MPI+P+  +W ALL  
Sbjct: 261 EGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGG 320

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
           C++H NIDLA  AI+ L +L+P +     +I  IYA   + EDA +VRKL ++   + + 
Sbjct: 321 CKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAARVRKLMKDRGVKKTS 380

Query: 739 GQCWIEVKNLVYTFVTGGWSESYS-DLLYSW----LQNVPENVTARSSHSGLCIEEEEKE 793
           G   I V  +V+ FV G  +   + D+   W    ++        ++S   L +EE+EKE
Sbjct: 381 GWSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYAPKTSVVLLDMEEKEKE 440

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
           +    HSEKLA+ F L+ + +    IRI+KN+R+C  CH   K +S +   EI + D   
Sbjct: 441 KFLYRHSEKLAVVFGLMTTPEGT-PIRIMKNLRVCEDCHAALKIISGIVSREIIVRDRNR 499

Query: 854 LHHFKNGQCSCGDYW 868
            H F++GQCSC D+W
Sbjct: 500 FHCFRDGQCSCRDFW 514



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 164/358 (45%), Gaps = 42/358 (11%)

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + PD F    +L+AC    D   GK +H L  KLG      ++N +L +Y  CG      
Sbjct: 6   VLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCG------ 59

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
                                    E  +A  LF+KM + +     VT+NI+I    + G
Sbjct: 60  -------------------------EMGDAMLLFEKMPQRD----AVTWNIVIAQLAKRG 90

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
             D A     RM +     +V +WT MISGF Q G+ ++A+DLF ++    V PN VT+ 
Sbjct: 91  DIDGAYGFFLRMPN----KNVRSWTSMISGFVQCGKPNEAIDLFMKLEDEAVRPNEVTVV 146

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           S ++AC DL  L +G  +H  + K GF  +V V N+LI+MY KC  LE A RVF  ++++
Sbjct: 147 SVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENARRVFYEMEER 206

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLF 452
            V SW++MIAG    G   +A  LF +M +  V PN +T+  L+      G  DE    F
Sbjct: 207 TVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFF 266

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
             M  +  V      +  ++  + + G    A      M      PN V   ++L  C
Sbjct: 267 ASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMP---IKPNGVVWGALLGGC 321



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 178/375 (47%), Gaps = 42/375 (11%)

Query: 63  LLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER- 120
           +L+AC+  + +   + +H  F  L    ++F++  +L++Y  CG + DA  +FE M +R 
Sbjct: 16  VLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMPQRD 75

Query: 121 ------------------------------NLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
                                         N+ +W++MI  + +  +  E ++LF  +  
Sbjct: 76  AVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLED 135

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + + P++     +L AC + GD + G+++H    K G      V N+++ +YVKCG L  
Sbjct: 136 EAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLEN 195

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           ARR F  M+E+  V+W++MI+G    G+ +EA  LF +M +  +K   VTF  L+ + + 
Sbjct: 196 ARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNGVTFIGLLHACSH 255

Query: 271 LGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           +G  D        M +  G+ P +  + C++  F++ G   +A +    M    + PNGV
Sbjct: 256 MGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMP---IKPNGV 312

Query: 330 TITSAISACTDLKALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
              + +  C   K + +  E I  L+      D   V  S  N+Y++ E  E A RV  +
Sbjct: 313 VWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVIS--NIYAEAERWEDAARVRKL 370

Query: 389 IKDKDVY---SWNSM 400
           +KD+ V     W+S+
Sbjct: 371 MKDRGVKKTSGWSSI 385



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 3/200 (1%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           G+ NEAI +   +  +  +    T +++L AC D   + L R +H +      + +V V 
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVC 180

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+ +Y KCGCL++AR VF +M ER + +WSAMI   +   +  E + LF  M++ G+ 
Sbjct: 181 NTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVK 240

Query: 155 PDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           P+   F  +L AC + G  + G +   S+    G+         V+ ++ + G L  A  
Sbjct: 241 PNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHE 300

Query: 214 FFESMDEK-DGVAWNSMISG 232
           F  SM  K +GV W +++ G
Sbjct: 301 FILSMPIKPNGVVWGALLGG 320


>gi|297745420|emb|CBI40500.3| unnamed protein product [Vitis vinifera]
          Length = 1133

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 193/585 (32%), Positives = 303/585 (51%), Gaps = 43/585 (7%)

Query: 290  TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC-TDLKALAMGM 348
             P+   W   I    Q+ +  + ++LF++M F  +     TI   + A  ++L  L MG 
Sbjct: 586  NPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQASISELGFLNMGK 645

Query: 349  EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
            E H   ++ GF  DV VG SLI+MY K   L +A+ VFD +K++                
Sbjct: 646  ETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNR---------------- 689

Query: 409  YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                               N+  WN L+SGY   G  ++A+ L  +M K + +K +  +W
Sbjct: 690  -------------------NIFAWNSLVSGYSFKGMFEDALRLLNQMEK-EGIKPDLVTW 729

Query: 469  NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
            N +I+GY   G    AL  F +MQ     PN  +I  +L ACA L    K KEIH   +R
Sbjct: 730  NGMISGYAMWGCGKEALAFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIR 789

Query: 529  RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
                  + V  +LID Y+KS ++  +  +F  + +K + +WN +I G+ + G    A+ +
Sbjct: 790  NGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISV 849

Query: 589  FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
            F++M+  G+ P+  TF +++ A   +G++  G K F S+   Y+I+P +EHY  M+DL G
Sbjct: 850  FNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLG 909

Query: 649  RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
            R+G L+EA + I  MP++PD++IW ALL +CRIH N+  A  A + LF LEP +     L
Sbjct: 910  RAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYIL 969

Query: 709  ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
            ++ +Y+I  + ED   +R+L      RN     WI++   V+ F +       +  +Y  
Sbjct: 970  MMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYFE 1029

Query: 769  L-QNVPENVTARSSHSGLCI----EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
            L Q V E           C+    +E EK++I   H+EKLA+ + LI   +A   IR++K
Sbjct: 1030 LYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLI-KMKAGEPIRVIK 1088

Query: 824  NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            N R+C  CH  AKY+S++   E+FL D    HHF+ G+CSC D+W
Sbjct: 1089 NTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1133



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 198/428 (46%), Gaps = 37/428 (8%)

Query: 30  DFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTE 88
           +F    G L+  + V   +  +G       Y   L+ C     I L  ++H   +    +
Sbjct: 496 EFKSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFD 555

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
           +DV+++  L++ Y +C  L+ A +VF +M       W+  I    + ++ ++ VELF  M
Sbjct: 556 LDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKM 615

Query: 149 VQDGLFPDDFLFPKILQAC-GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
               L  +     ++LQA     G    GK  H  V++ G  C   V  S++ +YVK   
Sbjct: 616 QFSFLKAETATIVRVLQASISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHS 675

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           L  A+  F++M  ++  AWNS++SGY   G  ++A RL ++M +E IK  +VT+N +I  
Sbjct: 676 LTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISG 735

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           Y   G    A+    +M+  G+ P                                   N
Sbjct: 736 YAMWGCGKEALAFFAQMQQEGVMP-----------------------------------N 760

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             +IT  + AC  L  L  G EIH L+++ GF +DV V  +LI+MYSK   L+ A +VF 
Sbjct: 761 SASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFR 820

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
            I++K + SWN MI G+   G   +A  +F +MQ+  V P+ IT+  L+S    +G   E
Sbjct: 821 RIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGE 880

Query: 448 AVDLFQRM 455
               F  M
Sbjct: 881 GWKYFDSM 888


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  327 bits (837), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 221/718 (30%), Positives = 342/718 (47%), Gaps = 113/718 (15%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRER-NLYTWSAMIGAYSRDQRWREVVELFFLMVQ-DGLF 154
           L+++Y  C     A+ VF+ +    ++  W+ ++ A +++  + E +E+F  ++    L 
Sbjct: 236 LINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLK 295

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD F +P +L+AC   G    GK++H+ VIK G +                         
Sbjct: 296 PDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAM------------------------ 331

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
                  D V  +S +  Y +    ++A +LFD                           
Sbjct: 332 -------DVVVMSSAVGMYAKCNVFEDAIKLFD--------------------------- 357

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
               EM +R        DV +W  +IS + Q+G+  +AL+LF+EM   G  P+ VT+T+ 
Sbjct: 358 ----EMPER--------DVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTV 405

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           IS+C  L  L  G EIH   V+ GF  D  V ++L++MY KC  LE A+ VF+ I+ K+V
Sbjct: 406 ISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNV 465

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL---------------ISGY 439
            SWNSMIAGY   G      ELF +M E  + P + T + +               I GY
Sbjct: 466 VSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGY 525

Query: 440 I--------------------QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           I                    + GN   A ++FQ M K      N  SWN +I+GY ++G
Sbjct: 526 IIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKT-----NVVSWNVMISGYVKVG 580

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
               AL +F  M+ +   P+ +T  SVLPAC+ L    K KEIH  ++   LE +  VM 
Sbjct: 581 SYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMG 640

Query: 540 SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
           +L+D YAK G +  +  IF+ +  +D ++W S+I  Y  HG    AL LF++M+    KP
Sbjct: 641 ALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKP 700

Query: 600 NRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEF 659
           ++ TFL+I+ A S AG+VD G   F  +   Y   P +EHYS +IDL GR G+L EA E 
Sbjct: 701 DKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEI 760

Query: 660 IEDMP-IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
           ++  P I  D  +   L +AC +H  +DL       L + +P D     ++  +YA   K
Sbjct: 761 LQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKK 820

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV 776
            ++  KVR   +E   + + G  WIEV   ++ FV    S   +D++Y  +  +  +V
Sbjct: 821 WDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHV 878



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 235/464 (50%), Gaps = 32/464 (6%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           TY ++L+AC     +   + +H   +     +DV V +  + +YAKC   +DA ++F++M
Sbjct: 300 TYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEM 359

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            ER++ +W+ +I  Y +D +  + +ELF  M   G  PD      ++ +C    D E GK
Sbjct: 360 PERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGK 419

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H  +++ G +    V ++++ +Y KCG L  A+  FE +  K+ V+WNSMI+GY   G
Sbjct: 420 EIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKG 479

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILI----RSYN-QLGQCDVAMEMVKRMES------ 286
           ++     LF +M  E I+  + T + ++    RS N QLG+      +  R+E+      
Sbjct: 480 DSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNS 539

Query: 287 -----------LGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
                      +G   +VF         +W  MISG+ + G   +AL +F +M   GV P
Sbjct: 540 SLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKP 599

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           + +T TS + AC+ L  L  G EIH+  ++     + +V  +L++MY+KC  ++ A  +F
Sbjct: 600 DAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIF 659

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
           + + ++D  SW SMIA Y   G   +A +LF KMQ+SD  P+ +T+  ++S     G  D
Sbjct: 660 NQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVD 719

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
           E    F +M      K     ++ LI    ++G+   A  + ++
Sbjct: 720 EGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQR 763



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 184/396 (46%), Gaps = 45/396 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTE---IDV 91
           +G+  +A+ + + +   G K    T   ++ +C     +   +++H  + LV     +D 
Sbjct: 377 DGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIH--MELVRSGFALDG 434

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV + L+ +Y KCGCL+ A+EVFE ++ +N+ +W++MI  YS     +  +ELF  M ++
Sbjct: 435 FVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEE 494

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+ P       IL AC    + + GK +H  +I+  +     V +S++ +Y KCG +  A
Sbjct: 495 GIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSA 554

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------- 261
              F++M + + V+WN MISGY ++G   EA  +F  M +  +K   +TF          
Sbjct: 555 ENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQL 614

Query: 262 ----------NILIRS---------------YNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                     N +I S               Y + G  D A+ +  ++       D  +W
Sbjct: 615 AVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPER----DFVSW 670

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG-MEIHSLAV 355
           T MI+ +  +G+  +AL LF++M      P+ VT  + +SAC+    +  G    + +  
Sbjct: 671 TSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIA 730

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           + GF   V   + LI++  +   L  A  +     D
Sbjct: 731 EYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPD 766


>gi|302759917|ref|XP_002963381.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
 gi|300168649|gb|EFJ35252.1| hypothetical protein SELMODRAFT_80412 [Selaginella moellendorffii]
          Length = 860

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 206/741 (27%), Positives = 359/741 (48%), Gaps = 92/741 (12%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVT---EIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           T+ ++L AC   + +   + +H  +   +   + D  ++  L+++Y KCG L+DA  VF 
Sbjct: 130 TFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGKCGSLEDAERVFH 189

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCGDFE 174
            +R +N ++W+AMI AY+++   R  +E+F  M+ +G + PD   +  +L AC   GD E
Sbjct: 190 GIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTACSTLGDLE 249

Query: 175 AGKLMHSLVIK---LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
            G  +H+L+ +   LG+     +++ +L+++ +CG L+  R  F+ M  +  V W +MI+
Sbjct: 250 TGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTVVTWTTMIA 309

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
            Y Q G + EA  L+  M   +I+   +  + ++++ ++L   +    +  R+ S    P
Sbjct: 310 AYNQRGYSMEALELYHCM---DIEPDDIALSNVLQACSRLKNLEQGRAVHSRIASRDFEP 366

Query: 292 -------------------------------DVFTWTCMISGFAQNGRTSQALDLFKEMS 320
                                          DV +WT +I+ ++      +AL++F  M 
Sbjct: 367 SLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREALEVFHSME 426

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
             GV PN +T  + I AC+ L +L  G  +HS  V  G   D  VGN+L++MYSK   ++
Sbjct: 427 LEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGNALVSMYSKFGRVD 486

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM-------------------- 420
            A  VFD I  K   SW  M+    Q G+  +A E++ ++                    
Sbjct: 487 FARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCT 546

Query: 421 ---------------QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
                          + SD  P+++  NVL++ Y + G  ++A  +F +M      ++N 
Sbjct: 547 ALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARLVFDQM-----TEKNE 601

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
            SW ++I GY Q G+   AL +++ M      PN +  + V+ +CA L A  + + +H  
Sbjct: 602 VSWTTMIGGYAQNGRPAEALELYKAMD---VQPNFIAFVPVISSCADLGALVEGQRVHAR 658

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
           +    L+++  ++ +L++ YAK G +  +R  FD     D   WNS+   Y   G     
Sbjct: 659 LSDAGLQNNEVIVTALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQV 718

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           L+L+ +M   G++PN  T LS+++A S  GM++  +  F  +   + I P  EHYS M D
Sbjct: 719 LELYREMCLQGVQPNGITLLSVLVACSHMGMLEECEHRFECMVADHGIAPTSEHYSCMTD 778

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDS--------SIWEALLTACRIHGNIDLAVLAIERLFD 697
           L GRSG+LEEA + ++    E  S        S W + L AC+ H +   A  A E+L++
Sbjct: 779 LLGRSGRLEEAEKVVKMASGESGSEAASPVAVSAWMSFLGACKTHNDWGRAAGAAEKLYE 838

Query: 698 LEPGDVLIQRLILQIYAICGK 718
           L+P D     L+ Q Y+   K
Sbjct: 839 LDPEDSAPYVLLSQTYSPQAK 859



 Score =  278 bits (710), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 195/719 (27%), Positives = 338/719 (47%), Gaps = 93/719 (12%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
            G   EA+ + + +  +G      T+  +L AC     +   +K+H  +   V  +D  +
Sbjct: 8   KGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESVARVDTVL 67

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           +  LL++YAKCG L+++R +FE M  R + TW+ MI AY +   ++E +E F  M     
Sbjct: 68  QNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFRRMDAP-- 125

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR-----RVRNSVLAVYVKCGKL 208
            P    F  +L AC +  D E GK +H    ++G S  +      ++NS++ +Y KCG L
Sbjct: 126 -PSSITFTSVLGACCSPDDLETGKAIHR---QIGGSSPQIQADEILQNSLVTMYGKCGSL 181

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF-DKMCREEIKLGVVTFNILIRS 267
             A R F  +  K+  +W +MI+ Y Q G    A  +F D M    ++   +T+  ++ +
Sbjct: 182 EDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYAGVLTA 241

Query: 268 YNQLGQCDVAME---MVKRMESLGITPD-------------------------------V 293
            + LG  +  M    ++ R+ +LG+  D                               V
Sbjct: 242 CSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRMPHRTV 301

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            TWT MI+ + Q G + +AL+L+  M    + P+ + +++ + AC+ LK L  G  +HS 
Sbjct: 302 VTWTTMIAAYNQRGYSMEALELYHCMD---IEPDDIALSNVLQACSRLKNLEQGRAVHSR 358

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
                F   ++V   L++MY KC +L  A R FD  K +DV SW S+I  Y    +  +A
Sbjct: 359 IASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVISWTSLITAYSHENFGREA 418

Query: 414 YELFIKMQESDVPPNVITW---------------------NVLISGYIQN---GNEDEAV 449
            E+F  M+   V PN IT+                      V+ +G+I +   GN    V
Sbjct: 419 LEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFVGN--ALV 476

Query: 450 DLFQRMGKND---------KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
            ++ + G+ D          VKR   SW  ++    Q G  + AL ++ ++    F P  
Sbjct: 477 SMYSKFGRVDFARMVFDSIPVKR-YPSWRVMLVALTQNGHSHEALEMYSRIHLEGFRPGS 535

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
               + L +C  L   ++ + IHG +        L + N L++ YAK G +  +R +FD 
Sbjct: 536 PIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARLVFDQ 595

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           M+ K+ ++W ++I GY  +G    AL+L+   K+  ++PN   F+ +I + +  G +  G
Sbjct: 596 MTEKNEVSWTTMIGGYAQNGRPAEALELY---KAMDVQPNFIAFVPVISSCADLGALVEG 652

Query: 621 KKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           ++V   +++   Q   +I   +A++++Y + GKL  A EF  D    PD+  W ++ TA
Sbjct: 653 QRVHARLSDAGLQNNEVI--VTALVNMYAKCGKLGLAREFF-DSTYCPDAGAWNSMATA 708



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 172/698 (24%), Positives = 306/698 (43%), Gaps = 122/698 (17%)

Query: 128 MIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
           MI AY++    RE +EL+  M + G+ P+D  F  +L AC    D E GK +H  + +  
Sbjct: 1   MISAYAQKGYHREALELYEEMDERGVDPNDKTFACVLSACAGLKDMERGKKVHRRIRESV 60

Query: 188 MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
                 ++N++L +Y KCG L  +RR FE+M+ +    WN+MI+ Y Q     EA   F 
Sbjct: 61  ARVDTVLQNALLNLYAKCGDLEESRRIFEAMERRTVATWNTMITAYVQHDFFQEALEAFR 120

Query: 248 KM----------------------------------CREEIKLGVVTFNILIRSYNQLGQ 273
           +M                                     +I+   +  N L+  Y + G 
Sbjct: 121 RMDAPPSSITFTSVLGACCSPDDLETGKAIHRQIGGSSPQIQADEILQNSLVTMYGKCG- 179

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTIT 332
              ++E  +R+       + F+WT MI+ +AQNG   +A+++F +M   G V P+ +T  
Sbjct: 180 ---SLEDAERVFHGIRRKNAFSWTAMITAYAQNGYERRAIEVFGDMMSEGRVEPDPITYA 236

Query: 333 SAISACTDLKALAMGMEIHSLAVK---MGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
             ++AC+ L  L  GM IH+L  +   +G   D ++ + +++++++C  L     +FD +
Sbjct: 237 GVLTACSTLGDLETGMRIHALIHRIYTLGLEYDDVLQDGILSLHARCGSLVGTREMFDRM 296

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELF-------------------------------- 417
             + V +W +MIA Y Q GY  +A EL+                                
Sbjct: 297 PHRTVVTWTTMIAAYNQRGYSMEALELYHCMDIEPDDIALSNVLQACSRLKNLEQGRAVH 356

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
            ++   D  P+++   +L+  Y++ G+  EA   F      D +     SW SLI  Y  
Sbjct: 357 SRIASRDFEPSLMVQTLLVDMYVKCGDLAEARRTFDGFKARDVI-----SWTSLITAYSH 411

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
                 AL VF  M+     PN +T  +V+ AC+ L +    + +H  V+     S   V
Sbjct: 412 ENFGREALEVFHSMELEGVEPNSITFCTVIDACSRLSSLLPGRALHSRVVATGHISDEFV 471

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
            N+L+  Y+K G + ++R +FD +  K   +W  ++     +G  H AL+++ ++   G 
Sbjct: 472 GNALVSMYSKFGRVDFARMVFDSIPVKRYPSWRVMLVALTQNGHSHEALEMYSRIHLEGF 531

Query: 598 KPNRGTF---------------------------------LSIILAHSLA--GMVDLGKK 622
           +P    F                                 LS +L +  A  G ++  + 
Sbjct: 532 RPGSPIFSAALVSCTALEDVSRARAIHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARL 591

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
           VF  +TE  ++      ++ MI  Y ++G+  EA+E  + M ++P+   +  ++++C   
Sbjct: 592 VFDQMTEKNEV-----SWTTMIGGYAQNGRPAEALELYKAMDVQPNFIAFVPVISSCADL 646

Query: 683 GNIDLAVLAIERLFD--LEPGDVLIQRLILQIYAICGK 718
           G +        RL D  L+  +V++  L+  +YA CGK
Sbjct: 647 GALVEGQRVHARLSDAGLQNNEVIVTALV-NMYAKCGK 683



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 151/308 (49%), Gaps = 14/308 (4%)

Query: 19  KSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARK 78
           K  P +R   L  L  NG  +EA+ +   I  +G +     +   L +C     +  AR 
Sbjct: 498 KRYPSWR-VMLVALTQNGHSHEALEMYSRIHLEGFRPGSPIFSAALVSCTALEDVSRARA 556

Query: 79  LHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 137
           +H  +       D+ +   L++VYAKCG L+ AR VF+ M E+N  +W+ MIG Y+++ R
Sbjct: 557 IHGVIKSSDFYPDLVLSNVLMNVYAKCGELEKARLVFDQMTEKNEVSWTTMIGGYAQNGR 616

Query: 138 WREVVELFFLM-VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRN 196
             E +EL+  M VQ    P+   F  ++ +C + G    G+ +H+ +   G+     +  
Sbjct: 617 PAEALELYKAMDVQ----PNFIAFVPVISSCADLGALVEGQRVHARLSDAGLQNNEVIVT 672

Query: 197 SVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL 256
           +++ +Y KCGKL  AR FF+S    D  AWNSM + Y Q G   +   L+ +MC + ++ 
Sbjct: 673 ALVNMYAKCGKLGLAREFFDSTYCPDAGAWNSMATAYAQFGHGSQVLELYREMCLQGVQP 732

Query: 257 GVVTFNILIRSYNQLGQCDVAMEMVKRMESL----GITPDVFTWTCMISGFAQNGRTSQA 312
             +T   ++ + + +G  +   E   R E +    GI P    ++CM     ++GR  +A
Sbjct: 733 NGITLLSVLVACSHMGMLE---ECEHRFECMVADHGIAPTSEHYSCMTDLLGRSGRLEEA 789

Query: 313 LDLFKEMS 320
             + K  S
Sbjct: 790 EKVVKMAS 797


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 218/752 (28%), Positives = 353/752 (46%), Gaps = 97/752 (12%)

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           +++ YVK G L  ARR F+  DE+  VAW +MI  Y +     +A +LF +M R   +  
Sbjct: 80  IISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPD 139

Query: 258 VVTF-----------------------------------NILIRSYNQLGQCDVAMEMVK 282
            VT+                                   N L+ SY + G  D A  +  
Sbjct: 140 YVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLF- 198

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
            +E  G   D  ++  MI+G+A NG   +A++LF EM  +G  P+  T  + ISA   L 
Sbjct: 199 -LEMCGW--DSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLD 255

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
             A G +IH   VK  F  +V VGN+ ++ YSK + +    ++F+ + + D  S+N +I 
Sbjct: 256 DTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRKLFNEMPELDGVSYNVIIT 315

Query: 403 GYCQAGYCGKAYELFIKMQ-----ESDVP------------------------------P 427
            Y   G   ++ +LF ++Q       + P                              P
Sbjct: 316 AYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADP 375

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           +    N L+  Y + G  +EA  +F R+       R+T  W ++I+   Q G   N L +
Sbjct: 376 DFRVSNSLVDMYAKCGKFEEADRIFLRLSS-----RSTVPWTAMISANVQRGLHENGLKL 430

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN-----SLI 542
           F +M+ +    +  T   VL A A L +    K++H CV+R         MN     +L+
Sbjct: 431 FYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGF------MNVYSGCALL 484

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
           D YA   +I  +   F+ MS ++++TWN+L+  Y  +G     L  F++M   G +P+  
Sbjct: 485 DMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSV 544

Query: 603 TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           +FL I+ A S   +V+ G K F  ++  Y + P  EHY+AM+D   RSG+ +EA + +  
Sbjct: 545 SFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQ 604

Query: 663 MPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP-GDVLIQRLILQIYAICGKPED 721
           MP EPD  +W ++L +CRIH N  LA  A  +LF+++   D      +  I+A  G+ + 
Sbjct: 605 MPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQWDS 664

Query: 722 ALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSS 781
            +KV+K  R+   R      W+E+K+ V+ F            +   ++ + E +     
Sbjct: 665 VVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEKEGY 724

Query: 782 HSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAK 836
              +      +++E K +    HSE+LA+AFALI + +    I ++KN+R C  CH   K
Sbjct: 725 DPDISCAHQNVDKESKIDSLKYHSERLAIAFALINTPEGS-PILVMKNLRACTDCHAAIK 783

Query: 837 YVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +S +   EI + DS   HHF++G CSCGDYW
Sbjct: 784 VISKIVGREITVRDSNRFHHFRDGSCSCGDYW 815



 Score =  185 bits (470), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 156/632 (24%), Positives = 264/632 (41%), Gaps = 82/632 (12%)

Query: 19  KSNPRFRDTHLDFLCGNGRLNEAITVLDS-IATQGAKVRRNTYINLLQACIDSNSIHLAR 77
           K+ P FR   L  L G        T +D+ I   G     + +  +++   +   +  AR
Sbjct: 4   KAPPPFRANQLKTLHGASSRQTLQTCIDARIVKTGFDPITSRFNFMIKDLSERGQLCQAR 63

Query: 78  KLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 137
           +L   L+ +   + F    ++S Y K G L  AR +F+D  ER +  W+ MIGAYS+  R
Sbjct: 64  QL---LDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNR 120

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM---HSLVIKLGMSCVRRV 194
           + +  +LF  M + G  PD   +  +L     C D E  K +   H+ ++KLG     RV
Sbjct: 121 FGDAFKLFAEMHRSGSQPDYVTYITLLTG---CNDLEVAKELYQAHAQIVKLGHHLNHRV 177

Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
            N++L  Y K G L  ARR F  M   D V++N MI+GY   G N+EA  LF +M     
Sbjct: 178 CNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGF 237

Query: 255 KLGVVTFNILIRSYNQLGQCDVAMEM-------------------------------VKR 283
           K    TF  +I +   L       ++                               V++
Sbjct: 238 KPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVRK 297

Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
           + +     D  ++  +I+ +A  G+  +++DLF+E+ F           + +S       
Sbjct: 298 LFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLD 357

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           L MG ++H+  V      D  V NSL++MY+KC + E A+R+F  +  +    W +MI+ 
Sbjct: 358 LQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISA 417

Query: 404 YCQAGYCGKAYELFIKMQESDVPP----------------------------------NV 429
             Q G      +LF +M+ ++V                                    NV
Sbjct: 418 NVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFMNV 477

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
            +   L+  Y    +  +A+  F+ M      +RN  +WN+L++ Y Q G     L  F 
Sbjct: 478 YSGCALLDMYANCASIKDAIKTFEEMS-----ERNVVTWNALLSAYAQNGDGKGTLKSFE 532

Query: 490 KMQSSCFYPNCVTILSVLPACAY-LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
           +M  S + P+ V+ L +L AC++  +    +K  +      +L        +++D   +S
Sbjct: 533 EMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRS 592

Query: 549 GNIVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
           G    +  +   M    D I W S++    +H
Sbjct: 593 GRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIH 624



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 224/497 (45%), Gaps = 57/497 (11%)

Query: 226 WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME 285
           +N MI    + G+  +A +L D+M          + +I+I  Y + G   VA  +    +
Sbjct: 46  FNFMIKDLSERGQLCQARQLLDQMPNR----NSFSIDIIISGYVKSGNLTVARRIFDDTD 101

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
                  V  WT MI  ++++ R   A  LF EM   G  P+ VT  + ++ C DL+   
Sbjct: 102 ER----TVVAWTTMIGAYSKSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAK 157

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
              + H+  VK+G   +  V N+L++ Y K   L++A R+F  +   D  S+N MI GY 
Sbjct: 158 ELYQAHAQIVKLGHHLNHRVCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYA 217

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITWNVLISG---------------------YIQN-- 442
             G   +A ELF++MQ     P+  T+  +IS                      +I+N  
Sbjct: 218 NNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVF 277

Query: 443 -GNE-----------DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
            GN            +E   LF  M + D V     S+N +I  Y  +G+   ++ +F++
Sbjct: 278 VGNAFLDFYSKHDCVNEVRKLFNEMPELDGV-----SYNVIITAYAWVGKVKESIDLFQE 332

Query: 491 MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGN 550
           +Q + F        ++L   A  +     +++H  V+    +    V NSL+D YAK G 
Sbjct: 333 LQFTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGK 392

Query: 551 IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA 610
              +  IF  +SS+  + W ++I   V  G     L LF +M+   +  ++ TF  ++ A
Sbjct: 393 FEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKA 452

Query: 611 HSLAGMVDLGKKVF-CSITECYQIIPMIEHYS--AMIDLYGRSGKLEEAMEFIEDMPIEP 667
            +    + LGK++  C I   +  +     YS  A++D+Y     +++A++  E+M  E 
Sbjct: 453 SANLASILLGKQLHSCVIRSGFMNV-----YSGCALLDMYANCASIKDAIKTFEEMS-ER 506

Query: 668 DSSIWEALLTACRIHGN 684
           +   W ALL+A   +G+
Sbjct: 507 NVVTWNALLSAYAQNGD 523



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/399 (23%), Positives = 180/399 (45%), Gaps = 51/399 (12%)

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
            L G S       C +    +  FD I  +    +N MI    + G   +A +L  +M  
Sbjct: 16  TLHGASSRQTLQTCIDARIVKTGFDPITSR----FNFMIKDLSERGQLCQARQLLDQMPN 71

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
                N  + +++ISGY+++GN   A  +F     +D  +R   +W ++I  Y +  +  
Sbjct: 72  R----NSFSIDIIISGYVKSGNLTVARRIF-----DDTDERTVVAWTTMIGAYSKSNRFG 122

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
           +A  +F +M  S   P+ VT +++L  C  L  + ++ + H  +++     +  V N+L+
Sbjct: 123 DAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVCNTLL 182

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
           D+Y K+G +  +R +F  M   D +++N +I GY  +G    A++LF +M++ G KP+  
Sbjct: 183 DSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDF 242

Query: 603 TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           TF ++I A         G+++   + +    I  +   +A +D Y +   + E  +   +
Sbjct: 243 TFAAVISASVGLDDTAFGQQIHGFVVKT-SFIRNVFVGNAFLDFYSKHDCVNEVRKLFNE 301

Query: 663 MPIEPDSSIWEALLTA----CRIHGNIDL-----------------AVLAI-ERLFDLEP 700
           MP E D   +  ++TA     ++  +IDL                  +L+I     DL+ 
Sbjct: 302 MP-ELDGVSYNVIITAYAWVGKVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQM 360

Query: 701 G--------------DVLIQRLILQIYAICGKPEDALKV 725
           G              D  +   ++ +YA CGK E+A ++
Sbjct: 361 GRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRI 399



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 118/246 (47%), Gaps = 13/246 (5%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           T+  +L+A  +  SI L ++LH+ +     ++V+    LL +YA C  + DA + FE+M 
Sbjct: 445 TFACVLKASANLASILLGKQLHSCVIRSGFMNVYSGCALLDMYANCASIKDAIKTFEEMS 504

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG-K 177
           ERN+ TW+A++ AY+++   +  ++ F  M+  G  PD   F  IL AC +C   E G K
Sbjct: 505 ERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLK 564

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQI 236
             + +     ++  R    +++    + G+   A +    M  E D + W S+++   +I
Sbjct: 565 YFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNSC-RI 623

Query: 237 GEN-----DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
            +N       A +LF+     +    V   NI    + + GQ D  +++ K M   G+  
Sbjct: 624 HKNYALARKAAGQLFNMKVLRDAAPYVTMSNI----FAEAGQWDSVVKVKKAMRDRGVRK 679

Query: 292 -DVFTW 296
              ++W
Sbjct: 680 LPAYSW 685


>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
          Length = 730

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 192/630 (30%), Positives = 331/630 (52%), Gaps = 60/630 (9%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           +V TWT +++G+  N + +  L++F EM  +G  P+  T+ + ++AC     + +G ++H
Sbjct: 103 NVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVH 162

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
             A+K G      +GNSL ++Y+K   L++A R F  I +K+V +W +MI+   +   C 
Sbjct: 163 GYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECV 222

Query: 412 K-AYELFIKMQESDVPPNVITWNVLISG-------------------------------- 438
           +    LFI M    V PN  T   ++S                                 
Sbjct: 223 ELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNST 282

Query: 439 ---YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL-----------GQKNNA 484
              Y++ G  DEA+ LF++M     +     +WN++I+GY Q+            +   A
Sbjct: 283 MYLYLRKGETDEAMRLFEQMEDASII-----TWNAMISGYAQIMDSAKDDLQARSRGFQA 337

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           L +FR ++ S   P+  T  S+L  C+ ++A  + ++IH   ++    S + V ++L++ 
Sbjct: 338 LTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNM 397

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           Y K G I  +   F  M ++  +TW S+I GY  HG    A+ LF++M+  G++PN  TF
Sbjct: 398 YNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITF 457

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           +S++ A S AG+V+  +  F  + + Y I P+++HY  MID++ R G++E+A  FI+   
Sbjct: 458 VSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTG 517

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
            EP+ +IW +L+  CR HGN++LA  A ++L +L+P  +    L+L +Y    + +D  +
Sbjct: 518 FEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVAR 577

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA----RS 780
           VRKL ++        + WI +K+ VY F     +   +  LY  L+N+ E   A      
Sbjct: 578 VRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPY 637

Query: 781 SHSGLCIEEEEKEEISGI---HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKY 837
            ++ L   E++++  +G    HSE+LA+A  L+ +     T+R+ KNI MC  CH + K 
Sbjct: 638 QNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGA-TVRVTKNITMCRDCHSSIKL 696

Query: 838 VSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
            S++ + EI + DSK LH FK+G+CSCGD+
Sbjct: 697 FSLLENREIIVRDSKRLHKFKDGRCSCGDF 726



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 217/449 (48%), Gaps = 54/449 (12%)

Query: 109 DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACG 168
           DAR +F+ M ERN+ TW+A++  Y+ + +    +E+F  M++ G +P  +     L AC 
Sbjct: 91  DARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACL 150

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
              D + GK +H   IK G   +  + NS+ ++Y K G L  A R F  + EK+ + W +
Sbjct: 151 ASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTT 210

Query: 229 MISGYFQIGENDE-AHRLFDKM--------------------CREEIKLG--VVTF---- 261
           MIS   +  E  E    LF  M                     R ++ LG  V  F    
Sbjct: 211 MISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKI 270

Query: 262 ----NILIRS-----YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ------- 305
               N+ +++     Y + G+ D AM + ++ME   I     TW  MISG+AQ       
Sbjct: 271 GCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASI----ITWNAMISGYAQIMDSAKD 326

Query: 306 ----NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
                 R  QAL +F+++    + P+  T +S +S C+ + AL  G +IH+  +K GF  
Sbjct: 327 DLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLS 386

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           DV+V ++L+NMY+KC  ++ A + F  +  +   +W SMI+GY Q G   +A +LF +M+
Sbjct: 387 DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR 446

Query: 422 ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK 481
            + V PN IT+  L+S     G  +EA   F  M K   ++     +  +I  + +LG+ 
Sbjct: 447 LAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRV 506

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            +A    ++   + F PN     S++  C
Sbjct: 507 EDAFSFIKR---TGFEPNEAIWSSLVAGC 532



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 124/459 (27%), Positives = 208/459 (45%), Gaps = 63/459 (13%)

Query: 64  LQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           L AC+ S  + L +++H + +    E    +   L S+YAK G LD A   F  + E+N+
Sbjct: 146 LNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNV 205

Query: 123 YTWSAMIGAYSRDQRWREV-VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
            TW+ MI A + D+   E+ + LF  M+ DG+ P++F    ++  CG   D   GK + +
Sbjct: 206 ITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQA 265

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI---GE 238
              K+G      V+NS + +Y++ G+   A R FE M++   + WN+MISGY QI    +
Sbjct: 266 FSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAK 325

Query: 239 ND--------EAHRLFDKMCREEIKLGVVTF----------------------------- 261
           +D        +A  +F  + R  +K  + TF                             
Sbjct: 326 DDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFL 385

Query: 262 ------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
                 + L+  YN+ G    A +    M     T    TWT MISG++Q+G+  +A+ L
Sbjct: 386 SDVVVNSALVNMYNKCGCIQDANKAFLEMP----TRTFVTWTSMISGYSQHGQPQEAIQL 441

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN--SLINMY 373
           F+EM   GV PN +T  S +SAC+    L    E +   +K  +  + +V +   +I+M+
Sbjct: 442 FEEMRLAGVRPNEITFVSLLSACS-YAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMF 500

Query: 374 SKCEELEAAERVFDMIK----DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
            +   +E A   F  IK    + +   W+S++AG    G    A+    K+ E   P  +
Sbjct: 501 VRLGRVEDA---FSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELK-PKGI 556

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
            T+ +L++ YI      +   + + M + D       SW
Sbjct: 557 ETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSW 595



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 25/308 (8%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA---- 81
           D+  D L    R  +A+T+   +     K    T+ ++L  C    ++    ++HA    
Sbjct: 322 DSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIK 381

Query: 82  --FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
             FL+     DV V + L+++Y KCGC+ DA + F +M  R   TW++MI  YS+  + +
Sbjct: 382 SGFLS-----DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQ 436

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS-- 197
           E ++LF  M   G+ P++  F  +L AC   G  E  +    ++ K    C+  V +   
Sbjct: 437 EAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK--EYCIEPVVDHYG 494

Query: 198 -VLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
            ++ ++V+ G++  A  F +    E +   W+S+++G    G  + A    DK+   + K
Sbjct: 495 CMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPK 554

Query: 256 LGVVTFNILIRSYNQLGQ-CDVA-MEMVKRMESLGITPDVFTWTCM---ISGFAQNGRT- 309
            G+ T+ +L+  Y    +  DVA +  + + E +GI  D  +W  +   +  F  N RT 
Sbjct: 555 -GIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDR-SWITIKDKVYFFRANDRTH 612

Query: 310 SQALDLFK 317
            QA +L++
Sbjct: 613 PQATELYQ 620



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 2/126 (1%)

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           +R +FDGM  ++++TW +L+ GY L+      L++F +M   G  P+  T  + + A   
Sbjct: 92  ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLA 151

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           +  VDLGK+V     + Y    +    +++  LY + G L+ A+     +P E +   W 
Sbjct: 152 SCDVDLGKQVHGYAIK-YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EKNVITWT 209

Query: 674 ALLTAC 679
            +++AC
Sbjct: 210 TMISAC 215


>gi|297798028|ref|XP_002866898.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312734|gb|EFH43157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 742

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 215/733 (29%), Positives = 368/733 (50%), Gaps = 54/733 (7%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLL 98
           +++  L +IA+  +    + +I+++  C  S S+   RK +A +       ++FV +KL+
Sbjct: 13  KSVVTLRTIASSSSSSYVDRHISVI-LCDQSLSLESLRKHNALIITGGNSENIFVASKLI 71

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
           S YA  G  + +  VF+ +  R+++ W+++I A+  +  +   +  FF M+  G  PD F
Sbjct: 72  SSYASYGKPNLSSRVFDLVTRRDVFLWNSIIKAHFSNGDYARSLGFFFSMLLSGQSPDHF 131

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKL-GMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
             P ++ AC     F+ G  +H  V+K  G      V  S +  Y KCG L  A   F+ 
Sbjct: 132 TAPMVVSACAELLWFDVGSFVHGFVLKHGGFERNTAVGASFVYFYSKCGFLQDACLVFDE 191

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI---------------------KL 256
           M E+D VAW ++ISG+ Q   N E+ R    +C+                         L
Sbjct: 192 MPERDVVAWTAIISGHVQ---NRESERALGYLCKMHTVGSDVDKPNPRTLECGFQACSNL 248

Query: 257 GVVTFNILIRSY---NQLGQCDVAMEMVKRMESLGITP-------------DVFTWTCMI 300
           G +     +  +   N L   +V    +  + S    P             D+F+WT +I
Sbjct: 249 GALKEGRCLHGFAVKNGLASSNVVQSSIFSLYSKSGNPAEAYLSFRELGDQDMFSWTSII 308

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +   ++G   ++ D+F EM   G+ P+G+ I+  IS       +  G   H   ++  F+
Sbjct: 309 ASLVRSGNVEESFDMFWEMQNKGMQPDGIVISCLISELGKKMLVPEGKAFHGFVIRHCFS 368

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIAGYCQAGYCGKAYELFIK 419
            D  V NSL++MY K E L  AE++F  I ++ +  +WN+M+ GY  A   GK+   ++ 
Sbjct: 369 LDSTVCNSLLSMYCKFEFLSVAEKLFCKISEEGNTEAWNTMLKGY-GAVLLGKSLHCYVV 427

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
               D+  +V+  N LI  Y + G+   A  +F       +   N  +WN++IA Y    
Sbjct: 428 KTSLDLTISVV--NSLIDLYGKMGDLTVAWRMFC------EADTNIVTWNAMIASYVYCE 479

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
           Q + A+ +F +M S  F P+ +T++++L ACA   +  + + IH  ++    E +L +  
Sbjct: 480 QPDKAIALFDRMVSENFKPSSITLVTLLMACANTGSLERGQMIHRYIIETEHEMNLSLST 539

Query: 540 SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
           +LID YAK G++  SR +FD  S KD + WN +I GY +HG   +A+ LFDQM+   +KP
Sbjct: 540 ALIDMYAKCGHLEKSRELFDAASQKDAVCWNVMISGYGMHGHVESAIALFDQMEESDVKP 599

Query: 600 NRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEF 659
              TFL+++ A + AG+V+ GK +F  + + Y + P ++HYS ++DL  RSG L+EA   
Sbjct: 600 TGPTFLALLSACTHAGLVEHGKNLFLKMHQ-YDVKPNLKHYSCLVDLLSRSGNLQEAETT 658

Query: 660 IEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKP 719
           +  MP  PD  IW  LL++C  HG  ++ +   +R    +P +     ++  +Y+  GK 
Sbjct: 659 VMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMADRAVASDPQNDGYYIMLANMYSAAGKW 718

Query: 720 EDALKVRKLEREN 732
           E A + R++ RE+
Sbjct: 719 EQAERAREMMRES 731



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 157/324 (48%), Gaps = 6/324 (1%)

Query: 72  SIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIG 130
           ++ L + LH ++   + ++ + V   L+ +Y K G L  A  +F +  + N+ TW+AMI 
Sbjct: 415 AVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA-DTNIVTWNAMIA 473

Query: 131 AYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSC 190
           +Y   ++  + + LF  MV +   P       +L AC N G  E G+++H  +I+     
Sbjct: 474 SYVYCEQPDKAIALFDRMVSENFKPSSITLVTLLMACANTGSLERGQMIHRYIIETEHEM 533

Query: 191 VRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC 250
              +  +++ +Y KCG L  +R  F++  +KD V WN MISGY   G  + A  LFD+M 
Sbjct: 534 NLSLSTALIDMYAKCGHLEKSRELFDAASQKDAVCWNVMISGYGMHGHVESAIALFDQME 593

Query: 251 REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTS 310
             ++K    TF  L+ +    G  +    +  +M    + P++  ++C++   +++G   
Sbjct: 594 ESDVKPTGPTFLALLSACTHAGLVEHGKNLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLQ 653

Query: 311 QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI 370
           +A      M F    P+GV   + +S+C       MG+ +   AV     +D      L 
Sbjct: 654 EAETTVMSMPFS---PDGVIWGTLLSSCMTHGEFEMGIRMADRAVASDPQNDGYY-IMLA 709

Query: 371 NMYSKCEELEAAERVFDMIKDKDV 394
           NMYS   + E AER  +M+++  V
Sbjct: 710 NMYSAAGKWEQAERAREMMRESGV 733


>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 632

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 193/586 (32%), Positives = 309/586 (52%), Gaps = 49/586 (8%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG--VTITSAISACTDLKALAMGM 348
           P++F +  ++  F+Q+      +  F     +   PN    T TS + AC  L  +  G 
Sbjct: 88  PNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQ 147

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           ++H    K G   ++ V NSL+++Y K      A+++FD +  +DV              
Sbjct: 148 KVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDV-------------- 193

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                                ++WN LISGY  +G  D+A  +F  M     +++N  SW
Sbjct: 194 ---------------------VSWNTLISGYCFSGMVDKARMVFDGM-----MEKNLVSW 227

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQ-SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           +++I+GY +  +  +A+ +FR+MQ      PN VT++SVL ACA+L A +  K IH  + 
Sbjct: 228 STMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIR 287

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           R  +E  L + N+L D YAK G ++ ++ +F  M  +D+I+W+ +I G  ++G+ + A +
Sbjct: 288 RNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFN 347

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
            F +M   GL+PN  +F+ ++ A + AG+VD G + F  + + Y I P IEHY  ++DL 
Sbjct: 348 FFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLL 407

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
            R+G+L++A   I  MP++P+  +W ALL  CRI+ + +     + R+ +L+        
Sbjct: 408 SRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLV 467

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
            +  +YA  G+ +DA   R   R+N    + G  WIE+ N VY F  G  S   S  +YS
Sbjct: 468 YLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYS 527

Query: 768 WLQNV--PENVTARSSHSGLC---IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
            ++ +     V      + L    I+EEEKE+    HSEKLALAF LI +S+   TIRIV
Sbjct: 528 MIRELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGT-TIRIV 586

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN+R+C  CH+  K +S +   EI + D    HHFK+G+CSC DYW
Sbjct: 587 KNLRVCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCSCNDYW 632



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 197/422 (46%), Gaps = 46/422 (10%)

Query: 93  VKTKLLSVYAKCGCLDDAREVFED-MRERNLYTWSAMIGAYSRDQRWREVVELFF--LMV 149
           +  K + V +  G L  +  +F   +   N++ ++A++ A+S+   W   +  F   L++
Sbjct: 60  IAVKFIGVSSSHGNLRHSVLIFNHFLSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVL 119

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            +   PD++ F  +L+AC        G+ +H  V K G      VRNS++ +Y K G   
Sbjct: 120 PNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNC 179

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A++ F+ M  +D V+WN++ISGY   G  D+A  +FD M  + +    V+++ +I  Y 
Sbjct: 180 IAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNL----VSWSTMISGY- 234

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV-GVMPNG 328
                                             A+N + + A++LF++M    G+ PN 
Sbjct: 235 ----------------------------------ARNEKYADAIELFRQMQHEGGLAPND 260

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
           VT+ S +SAC  L AL +G  IH    +      + +GN+L +MY+KC  +  A+ VF  
Sbjct: 261 VTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHE 320

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           + ++DV SW+ +I G    GY  +A+  F +M E  + PN I++  L++     G  D+ 
Sbjct: 321 MHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKG 380

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
           ++ F  M +   +      +  ++    + G+ + A  +   M      PN +   ++L 
Sbjct: 381 LEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMP---MQPNVIVWGALLG 437

Query: 509 AC 510
            C
Sbjct: 438 GC 439



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 152/326 (46%), Gaps = 37/326 (11%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTKLLSVYAKCGC----------- 106
           T+ ++L+AC     +   +K+H F+     E ++FV+  L+ +Y K GC           
Sbjct: 129 TFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEM 188

Query: 107 --------------------LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
                               +D AR VF+ M E+NL +WS MI  Y+R++++ + +ELF 
Sbjct: 189 VVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFR 248

Query: 147 LMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
            M  + GL P+D     +L AC + G  + GK +H  + +  +     + N++  +Y KC
Sbjct: 249 QMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKC 308

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G ++ A+  F  M E+D ++W+ +I G    G  +EA   F +M  + ++   ++F  L+
Sbjct: 309 GCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLL 368

Query: 266 RSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
            +    G  D  +E    M  + GITP +  + C++   ++ GR  QA  L   M    +
Sbjct: 369 TACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMP---M 425

Query: 325 MPNGVTITSAISACTDLKALAMGMEI 350
            PN +   + +  C   K    G  +
Sbjct: 426 QPNVIVWGALLGGCRIYKDAERGERV 451



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 101/202 (50%), Gaps = 4/202 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRN-TYINLLQACIDSNSIHLARKLHAFLNL-VTEIDVF 92
           N +  +AI +   +  +G     + T +++L AC    ++ L + +H F+     E+ +F
Sbjct: 237 NEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLF 296

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           +   L  +YAKCGC+ +A+ VF +M ER++ +WS +I   +      E    F  M++DG
Sbjct: 297 LGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDG 356

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL-GMSCVRRVRNSVLAVYVKCGKLIWA 211
           L P+D  F  +L AC + G  + G     ++ ++ G++        V+ +  + G+L  A
Sbjct: 357 LEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQA 416

Query: 212 RRFFESMD-EKDGVAWNSMISG 232
                SM  + + + W +++ G
Sbjct: 417 ESLINSMPMQPNVIVWGALLGG 438



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 109/234 (46%), Gaps = 11/234 (4%)

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLP--VMNSLIDTYAKSGNIVYSRTIFDG- 560
           + +L  CA  ++  ++ EI   ++   + S  P  +    I   +  GN+ +S  IF+  
Sbjct: 25  IHLLLRCATQLSMRQLFEIQAQIIASPIPSIDPNIIAVKFIGVSSSHGNLRHSVLIFNHF 84

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG--TFLSIILAHSLAGMVD 618
           +S  +I  +N+L+  +  H  WH  +  F+        PN    TF S++ A +    V 
Sbjct: 85  LSFPNIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVL 144

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            G+KV C +T+ Y     +   ++++DLY + G    A +  ++M +  D   W  L++ 
Sbjct: 145 EGQKVHCFVTK-YGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR-DVVSWNTLISG 202

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV-RKLERE 731
               G +D A +  + + +    +++    ++  YA   K  DA+++ R+++ E
Sbjct: 203 YCFSGMVDKARMVFDGMME---KNLVSWSTMISGYARNEKYADAIELFRQMQHE 253


>gi|449454362|ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Cucumis sativus]
          Length = 664

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 216/695 (31%), Positives = 363/695 (52%), Gaps = 80/695 (11%)

Query: 56  RRNTYINLL----QACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAR 111
           RR    N++    Q C  S+  + + ++  F +L  +I   ++T         G +++AR
Sbjct: 28  RRPVLFNIVFQFKQTCFSSSKAN-SFQVPEFYSLNKKISYLIRT---------GRINEAR 77

Query: 112 EVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCG 171
           E+F+     N  TW+ MI AY + +   +  +LF  M      P+               
Sbjct: 78  ELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEM------PNR-------------- 117

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
           D  +  LM S  I  G   V R RN                  F+ M E D V+WN+M+S
Sbjct: 118 DIVSWNLMLSGYISCGGKFVERARN-----------------MFDQMPETDCVSWNTMLS 160

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
           GY + G  D+A  LF++M        VV++N ++  Y   G  + A+E  K M       
Sbjct: 161 GYAKSGMMDKAEELFNEMPER----NVVSWNAMVSGYLMNGHVEKAIEFFKLMPK----R 212

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           D  +   +ISG  QN +  +A  +   + + G +  G  + +  +         M  E  
Sbjct: 213 DSASLRALISGLIQNDKLVEAERIL--LQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEAR 270

Query: 352 SLAVKM------GFT-DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
            L  ++      G++  +V+  NS+I  Y +  ++ +A  +FD + ++D +SWN+MI+GY
Sbjct: 271 KLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGY 330

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
            Q     +A  LF +M E    P+ ++WN++ISG+ + G+   A DLF+R+      +++
Sbjct: 331 VQILDMKEASNLFSRMPE----PDTLSWNMMISGFSEIGSLKLAHDLFKRIP-----EKS 381

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             SWNS+I+GY++      A+ +F +MQ     P+  T+ S+L ACA LV      +IH 
Sbjct: 382 LVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLVLGTQIHQ 441

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWH 583
            V  ++  + LP+ NSL+  Y++ G IV +R +FD M+  +D+I+WN++I GY  HGF  
Sbjct: 442 LVT-KAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAYHGFAT 500

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            AL LFD MK   ++P+  TF+S++ A + AG+++ G++ F S+   + I P +EHY+A+
Sbjct: 501 EALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPQVEHYAAL 560

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           +D+ GR G+LEEAM  I  MP EPD ++W ALL AC++H N+++A  A E L  L+P   
Sbjct: 561 VDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVHNNVEMARAAAEALMKLQPESS 620

Query: 704 LIQRLILQIYAICGKPEDALKVRK-LERENTRRNS 737
               L+  +YA  G+ +DA ++R  +E+ N ++++
Sbjct: 621 APYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDA 655



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 161/587 (27%), Positives = 264/587 (44%), Gaps = 76/587 (12%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQG---------AKVRRNTYI--------------- 61
           +  + +L   GR+NEA  + DS              A V+R   +               
Sbjct: 61  NKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIV 120

Query: 62  --NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
             NL+ +   S       +     + + E D      +LS YAK G +D A E+F +M E
Sbjct: 121 SWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEELFNEMPE 180

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQ----------DGLFPDDFLFPK---ILQA 166
           RN+ +W+AM+  Y  +    + +E F LM +           GL  +D L      +LQ 
Sbjct: 181 RNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALISGLIQNDKLVEAERILLQY 240

Query: 167 CGNCGD--------------------FEAGKLMHSLVIKLGMSCVRR---VRNSVLAVYV 203
            GN G                     +EA KL   + +       RR     NS++  YV
Sbjct: 241 GGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYV 300

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           + G ++ AR  F+ M E+D  +WN+MISGY QI +  EA  LF +M   +     +++N+
Sbjct: 301 RAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPD----TLSWNM 356

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           +I  ++++G   +A ++ KR+    +     +W  MISG+ +N     A+++F +M   G
Sbjct: 357 MISGFSEIGSLKLAHDLFKRIPEKSLV----SWNSMISGYEKNEDYKGAMNIFLQMQLEG 412

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
             P+  T++S +SAC  L  L +G +IH L  K  F  D+ + NSL+ MYS+C  +  A 
Sbjct: 413 KKPDRHTLSSILSACAGLVDLVLGTQIHQLVTK-AFIADLPINNSLVTMYSRCGAIVEAR 471

Query: 384 RVFD-MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
            VFD M   +DV SWN+MI GY   G+  +A +LF  M++ +V P+ IT+  +++     
Sbjct: 472 MVFDEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHA 531

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G  +E    F  M     +K     + +L+    + GQ   A+ +   M      P+   
Sbjct: 532 GLIEEGRREFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCE---PDKAV 588

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
             ++L AC         +     +++   ESS P +  L + YA  G
Sbjct: 589 WGALLGACKVHNNVEMARAAAEALMKLQPESSAPYV-LLHNMYADVG 634



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 121/256 (47%), Gaps = 4/256 (1%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSV 100
           A+ +   +  +G K  R+T  ++L AC     + L  ++H  +      D+ +   L+++
Sbjct: 401 AMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLVLGTQIHQLVTKAFIADLPINNSLVTM 460

Query: 101 YAKCGCLDDAREVFEDMR-ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           Y++CG + +AR VF++M  +R++ +W+AMIG Y+      E ++LF LM Q  + P    
Sbjct: 461 YSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYIT 520

Query: 160 FPKILQACGNCGDFEAGKL-MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
           F  +L AC + G  E G+   +S+V   G+        +++ +  + G+L  A     SM
Sbjct: 521 FISVLNACAHAGLIEEGRREFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSM 580

Query: 219 D-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
             E D   W +++ G  ++  N E  R   +   +        + +L   Y  +G+ D A
Sbjct: 581 PCEPDKAVWGALL-GACKVHNNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDA 639

Query: 278 MEMVKRMESLGITPDV 293
            EM   ME   +  D 
Sbjct: 640 AEMRTMMEKNNVQKDA 655


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  326 bits (836), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 208/714 (29%), Positives = 357/714 (50%), Gaps = 86/714 (12%)

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
           N++I+ Y+++G    AH +FD + +  +     ++N ++  Y++LG     +  ++++ +
Sbjct: 44  NNLITAYYKLGNLAYAHHVFDHIPQPNL----FSWNTILSVYSKLG----LLSQMQQIFN 95

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP-NGVTITSAISACTDLKALA 345
           L    D  +W   ISG+A  G  S A+ ++K M     M  N +T ++ +  C+  + + 
Sbjct: 96  LMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVD 155

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSK------------------------------ 375
           +G +I+   +K GF  DV VG+ L++MY+K                              
Sbjct: 156 LGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLM 215

Query: 376 -CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ------------- 421
            C  +E ++R+F  +K++D  SW  MI G  Q G   +A ++F +M+             
Sbjct: 216 RCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGS 275

Query: 422 ----------------------ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
                                  +D   NV   + L+  Y +  +   A  +F+RM    
Sbjct: 276 VLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRM---- 331

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
             ++N  SW +++ GY Q G    A+ +F +MQ +   P+  T+ SV+ +CA L +  + 
Sbjct: 332 -PQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEG 390

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
            + H   L   L S + V N+LI  Y K G+   S  +F  M+ +D ++W +L+ GY   
Sbjct: 391 AQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQF 450

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
           G  +  + LF++M + GLKP+  TF+ ++ A S AG+V+ G + F S+ + + I+P+++H
Sbjct: 451 GKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDH 510

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
            + +IDL GR+G+LEEA  FI +MP  PD   W  LL++CR+HG++++   A + L  LE
Sbjct: 511 CTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALE 570

Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSE 759
           P +     L+  +YA  GK +   ++R+  R+   R   G  WI+ K  V+ F     S 
Sbjct: 571 PQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSS 630

Query: 760 SYSDLLYSWLQN-----VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQ 814
            +   +Y+ L+      + E      S     +EE EK ++   HSEKLA+AF LI    
Sbjct: 631 PFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIFVPP 690

Query: 815 APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
               IR++KN+R+C  CH   K++S +   EI + D+   H FK+G CSCGD+W
Sbjct: 691 GL-PIRVIKNLRVCGDCHNATKFISKITQREILVRDAVRFHLFKDGTCSCGDFW 743



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 148/595 (24%), Positives = 265/595 (44%), Gaps = 118/595 (19%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           N Y +LL+ C +S +   A+KLH   L  + + + F+   L++ Y K G L  A  VF+ 
Sbjct: 6   NYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDH 65

Query: 117 MRERNLYTWSAMIGAYS-----------------RDQ-RWR-------------EVVELF 145
           + + NL++W+ ++  YS                 RD   W              + V ++
Sbjct: 66  IPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVY 125

Query: 146 FLMVQDGLFP-DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
            LM++D     +   F  +L  C      + G+ ++  ++K G      V + ++ +Y K
Sbjct: 126 KLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTK 185

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
            G +  A+R+F+ M E++ V  N+MI+G  + G  +E+ RLF  +   +     +++ I+
Sbjct: 186 LGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERD----SISWTIM 241

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
           I    Q G    A++M + M   G   D FT+                            
Sbjct: 242 ITGLMQNGLEREALDMFREMRLAGFAMDQFTF---------------------------- 273

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
                   S ++AC  L AL  G +IH+  ++    D+V VG++L++MYSKC  +++AE 
Sbjct: 274 -------GSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAET 326

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------ 432
           VF  +  K+V SW +M+ GY Q G+  +A ++F +MQ + V P+  T             
Sbjct: 327 VFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLAS 386

Query: 433 -----------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
                                  N LI+ Y + G+ + +  LF  M   D+V     SW 
Sbjct: 387 LEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEV-----SWT 441

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           +L+AGY Q G+ N  +G+F +M +    P+ VT + VL AC+      K  +    +++ 
Sbjct: 442 ALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKE 501

Query: 530 SLESSLPVMNS---LIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
                +P+++    +ID   ++G +  +R   + M    D++ W +L+    +HG
Sbjct: 502 --HGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHG 554



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 160/309 (51%), Gaps = 5/309 (1%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID- 90
           L  NG   EA+ +   +   G  + + T+ ++L AC    ++   +++HA++      D 
Sbjct: 245 LMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDN 304

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           VFV + L+ +Y+KC  +  A  VF+ M ++N+ +W+AM+  Y ++    E V++FF M +
Sbjct: 305 VFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQR 364

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           +G+ PDDF    ++ +C N    E G   H   +  G+     V N+++ +Y KCG    
Sbjct: 365 NGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTEN 424

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           + R F  M+ +D V+W ++++GY Q G+ +E   LF++M    +K   VTF  ++ + ++
Sbjct: 425 SHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSR 484

Query: 271 LGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G  +  ++  + M +  GI P V   TC+I    + GR  +A +    M      P+ V
Sbjct: 485 AGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMP---CHPDVV 541

Query: 330 TITSAISAC 338
              + +S+C
Sbjct: 542 GWATLLSSC 550



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 128/543 (23%), Positives = 230/543 (42%), Gaps = 94/543 (17%)

Query: 5   ILTTFQQLHSLLTKKSNPRFRD-----THLDFLCGNGRLNEAITVLDSIATQGA-KVRRN 58
           +L+  QQ+ +L+       FRD       +      G  ++A+ V   +    A  + R 
Sbjct: 86  LLSQMQQIFNLMP------FRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRI 139

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  +L  C     + L R+++   L      DVFV + L+ +Y K G + DA+  F++M
Sbjct: 140 TFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEM 199

Query: 118 RERNLY-------------------------------TWSAMIGAYSRDQRWREVVELFF 146
            ERN+                                +W+ MI    ++   RE +++F 
Sbjct: 200 PERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDMFR 259

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M   G   D F F  +L ACG+      GK +H+ VI+        V ++++ +Y KC 
Sbjct: 260 EMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCR 319

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL---------- 256
            +  A   F+ M +K+ ++W +M+ GY Q G ++EA ++F +M R  ++           
Sbjct: 320 SIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVIS 379

Query: 257 ---------------------GVVTF----NILIRSYNQLGQCDVAMEMVKRMESLGITP 291
                                G+++F    N LI  Y + G  + +  +   M       
Sbjct: 380 SCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMN----IR 435

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-I 350
           D  +WT +++G+AQ G+ ++ + LF+ M   G+ P+GVT    +SAC+    +  G++  
Sbjct: 436 DEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYF 495

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER-VFDMIKDKDVYSWNSMIAGYCQAG- 408
            S+  + G    V     +I++  +   LE A   + +M    DV  W ++++     G 
Sbjct: 496 ESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGD 555

Query: 409 -YCGK-AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
              GK A +  I ++    P N  ++ +L S Y   G  D+   L  R G  DK  R   
Sbjct: 556 MEIGKWAADSLIALE----PQNPASYVLLSSLYASKGKWDKVAQL--RRGMRDKRVRKEP 609

Query: 467 SWN 469
            ++
Sbjct: 610 GYS 612



 Score = 52.8 bits (125), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 33/192 (17%)

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           S+L  C       + K++H  +L+   +    + N+LI  Y K GN+ Y+  +FD +   
Sbjct: 10  SLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQP 69

Query: 565 DIITWNSL-------------------------------ICGYVLHGFWHAALDLFDQM- 592
           ++ +WN++                               I GY  +G    A+ ++  M 
Sbjct: 70  NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
           K   +  NR TF ++++  S    VDLG+++   I + +     +   S ++D+Y + G 
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILK-FGFGSDVFVGSPLVDMYTKLGL 188

Query: 653 LEEAMEFIEDMP 664
           + +A  + ++MP
Sbjct: 189 IYDAKRYFDEMP 200


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 192/630 (30%), Positives = 331/630 (52%), Gaps = 60/630 (9%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           +V TWT +++G+  N + +  L++F EM  +G  P+  T+ + ++AC     + +G ++H
Sbjct: 143 NVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVH 202

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
             A+K G      +GNSL ++Y+K   L++A R F  I +K+V +W +MI+   +   C 
Sbjct: 203 GYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECV 262

Query: 412 K-AYELFIKMQESDVPPNVITWNVLISG-------------------------------- 438
           +    LFI M    V PN  T   ++S                                 
Sbjct: 263 ELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNST 322

Query: 439 ---YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL-----------GQKNNA 484
              Y++ G  DEA+ LF++M     +     +WN++I+GY Q+            +   A
Sbjct: 323 MYLYLRKGETDEAMRLFEQMEDASII-----TWNAMISGYAQIMDSAKDDLQARSRGFQA 377

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           L +FR ++ S   P+  T  S+L  C+ ++A  + ++IH   ++    S + V ++L++ 
Sbjct: 378 LTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNM 437

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           Y K G I  +   F  M ++  +TW S+I GY  HG    A+ LF++M+  G++PN  TF
Sbjct: 438 YNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITF 497

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           +S++ A S AG+V+  +  F  + + Y I P+++HY  MID++ R G++E+A  FI+   
Sbjct: 498 VSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTG 557

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
            EP+ +IW +L+  CR HGN++LA  A ++L +L+P  +    L+L +Y    + +D  +
Sbjct: 558 FEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMYISTERWQDVAR 617

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA----RS 780
           VRKL ++        + WI +K+ VY F     +   +  LY  L+N+ E   A      
Sbjct: 618 VRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLENLLEKAKAIGYEPY 677

Query: 781 SHSGLCIEEEEKEEISGI---HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKY 837
            ++ L   E++++  +G    HSE+LA+A  L+ +     T+R+ KNI MC  CH + K 
Sbjct: 678 QNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGA-TVRVTKNITMCRDCHSSIKL 736

Query: 838 VSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
            S++ + EI + DSK LH FK+G+CSCGD+
Sbjct: 737 FSLLENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 255/521 (48%), Gaps = 59/521 (11%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTK 96
           + EA+T+L    T+G  V+   Y+ LL  C+++ S+  AR +H  +       D+FV T 
Sbjct: 63  VQEAMTML----TEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATS 118

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L++ Y +C    DAR +F+ M ERN+ TW+A++  Y+ + +    +E+F  M++ G +P 
Sbjct: 119 LVNAYMRCSAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPS 178

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            +     L AC    D + GK +H   IK G   +  + NS+ ++Y K G L  A R F 
Sbjct: 179 HYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFW 238

Query: 217 SMDEKDGVAWNSMISGYFQIGENDE-AHRLFDKM--------------------CREEIK 255
            + EK+ + W +MIS   +  E  E    LF  M                     R ++ 
Sbjct: 239 RIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLN 298

Query: 256 LG--VVTF--------NILIRS-----YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
           LG  V  F        N+ +++     Y + G+ D AM + ++ME   I     TW  MI
Sbjct: 299 LGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASI----ITWNAMI 354

Query: 301 SGFAQ-----------NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
           SG+AQ             R  QAL +F+++    + P+  T +S +S C+ + AL  G +
Sbjct: 355 SGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQ 414

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           IH+  +K GF  DV+V ++L+NMY+KC  ++ A + F  +  +   +W SMI+GY Q G 
Sbjct: 415 IHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQ 474

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
             +A +LF +M+ + V PN IT+  L+S     G  +EA   F  M K   ++     + 
Sbjct: 475 PQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYG 534

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            +I  + +LG+  +A    ++   + F PN     S++  C
Sbjct: 535 CMIDMFVRLGRVEDAFSFIKR---TGFEPNEAIWSSLVAGC 572



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 148/308 (48%), Gaps = 25/308 (8%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA---- 81
           D+  D L    R  +A+T+   +     K    T+ ++L  C    ++    ++HA    
Sbjct: 362 DSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIK 421

Query: 82  --FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
             FL+     DV V + L+++Y KCGC+ DA + F +M  R   TW++MI  YS+  + +
Sbjct: 422 SGFLS-----DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQ 476

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS-- 197
           E ++LF  M   G+ P++  F  +L AC   G  E  +    ++ K    C+  V +   
Sbjct: 477 EAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK--EYCIEPVVDHYG 534

Query: 198 -VLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
            ++ ++V+ G++  A  F +    E +   W+S+++G    G  + A    DK+   + K
Sbjct: 535 CMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPK 594

Query: 256 LGVVTFNILIRSYNQLGQ-CDVA-MEMVKRMESLGITPDVFTWTCM---ISGFAQNGRT- 309
            G+ T+ +L+  Y    +  DVA +  + + E +GI  D  +W  +   +  F  N RT 
Sbjct: 595 -GIETYILLLNMYISTERWQDVARVRKLMKQEDVGILRDR-SWITIKDKVYFFRANDRTH 652

Query: 310 SQALDLFK 317
            QA +L++
Sbjct: 653 PQATELYQ 660



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/191 (24%), Positives = 91/191 (47%), Gaps = 9/191 (4%)

Query: 489 RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
           + +QS+ + P       +L  C    +    + +HG + +    + + V  SL++ Y + 
Sbjct: 74  KAVQSAMYVP-------LLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRC 126

Query: 549 GNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
                +R +FDGM  ++++TW +L+ GY L+      L++F +M   G  P+  T  + +
Sbjct: 127 SAARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATL 186

Query: 609 LAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
            A   +  VDLGK+V     + Y    +    +++  LY + G L+ A+     +P E +
Sbjct: 187 NACLASCDVDLGKQVHGYAIK-YGAESITSMGNSLCSLYAKLGSLDSALRAFWRIP-EKN 244

Query: 669 SSIWEALLTAC 679
              W  +++AC
Sbjct: 245 VITWTTMISAC 255


>gi|449523934|ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Cucumis sativus]
          Length = 664

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 207/652 (31%), Positives = 346/652 (53%), Gaps = 66/652 (10%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
            K +S   + G +++ARE+F+     N  TW+ MI AY + +   +  +LF  M      
Sbjct: 61  NKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEM------ 114

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+               D  +  LM S  I  G   V R RN                  
Sbjct: 115 PNR--------------DIVSWNLMLSGYISCGGKFVERARN-----------------M 143

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F+ M E D V+WN+M+SGY + G  D+A  LF++M        VV++N ++  Y   G  
Sbjct: 144 FDQMPETDCVSWNTMLSGYAKSGTMDKAEELFNEMPER----NVVSWNAMVSGYLMNGHV 199

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
           + A+E  K M       D  +   ++SG  QN +  +A  +   + + G +  G  + + 
Sbjct: 200 EKAIEFFKLMPK----RDSASLRALVSGLIQNDKLVEAERIL--LQYGGNVGKGDLVDAY 253

Query: 335 ISACTDLKALAMGMEIHSLAVKM------GFT-DDVLVGNSLINMYSKCEELEAAERVFD 387
            +         M  E   L  ++      G++  +V+  NS+I  Y +  ++ +A  +FD
Sbjct: 254 NTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFD 313

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
            + ++D +SWN+MI+GY Q     +A  LF +M E    P+ ++WN++ISG+ + G+   
Sbjct: 314 KMVERDTFSWNTMISGYVQILDMKEASNLFSRMPE----PDTLSWNMMISGFSEIGSLKL 369

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           A DLF+R+      +++  SWNS+I+GY++      A+ +F +MQ     P+  T+ S+L
Sbjct: 370 AHDLFKRIP-----EKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSIL 424

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDI 566
            ACA LV      +IH  V  ++  + LP+ NSL+  Y++ G IV +R +FD M+  +D+
Sbjct: 425 SACAGLVDLVLGTQIHQLVT-KAFIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDV 483

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
           I+WN++I GY  HGF   AL LFD MK   ++P+  TF+S++ A + AG+++ G++ F S
Sbjct: 484 ISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNS 543

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
           +   + I P +EHY+A++D+ GR G+LEEAM  I  MP EPD ++W ALL AC++H N++
Sbjct: 544 MVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVHNNVE 603

Query: 687 LAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK-LERENTRRNS 737
           +A  A E L  L+P       L+  +YA  G+ +DA ++R  +E+ N ++++
Sbjct: 604 MARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDA 655



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 161/587 (27%), Positives = 264/587 (44%), Gaps = 76/587 (12%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQG---------AKVRRNTYI--------------- 61
           +  + +L   GR+NEA  + DS              A V+R   +               
Sbjct: 61  NKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRDIV 120

Query: 62  --NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
             NL+ +   S       +     + + E D      +LS YAK G +D A E+F +M E
Sbjct: 121 SWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGTMDKAEELFNEMPE 180

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQ----------DGLFPDDFLFPK---ILQA 166
           RN+ +W+AM+  Y  +    + +E F LM +           GL  +D L      +LQ 
Sbjct: 181 RNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALVSGLIQNDKLVEAERILLQY 240

Query: 167 CGNCGD--------------------FEAGKLMHSLVIKLGMSCVRR---VRNSVLAVYV 203
            GN G                     +EA KL   + +       RR     NS++  YV
Sbjct: 241 GGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYV 300

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           + G ++ AR  F+ M E+D  +WN+MISGY QI +  EA  LF +M   +     +++N+
Sbjct: 301 RAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPD----TLSWNM 356

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           +I  ++++G   +A ++ KR+    +     +W  MISG+ +N     A+++F +M   G
Sbjct: 357 MISGFSEIGSLKLAHDLFKRIPEKSLV----SWNSMISGYEKNEDYKGAMNIFLQMQLEG 412

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
             P+  T++S +SAC  L  L +G +IH L  K  F  D+ + NSL+ MYS+C  +  A 
Sbjct: 413 KKPDRHTLSSILSACAGLVDLVLGTQIHQLVTK-AFIADLPINNSLVTMYSRCGAIVEAR 471

Query: 384 RVFD-MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
            VFD M   +DV SWN+MI GY   G+  +A +LF  M++ +V P+ IT+  +++     
Sbjct: 472 MVFDEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYITFISVLNACAHA 531

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G  +E    F  M     +K     + +L+    + GQ   A+ +   M      P+   
Sbjct: 532 GLIEEGRREFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCE---PDKAV 588

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
             ++L AC         +     +++   ESS P +  L + YA  G
Sbjct: 589 WGALLGACKVHNNVEMARAAAEALMKLQPESSAPYV-LLHNMYADVG 634



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 219/475 (46%), Gaps = 88/475 (18%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P+ ++    IS   + GR ++A +LF        +     IT+ +     LKA  +  E+
Sbjct: 55  PEFYSLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEM 114

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKC--EELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
            +         D++  N +++ Y  C  + +E A  +FD + + D  SWN+M++GY ++G
Sbjct: 115 PN--------RDIVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSG 166

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-- 466
              KA ELF +M E     NV++WN ++SGY+ NG+ ++A++ F+ M K D         
Sbjct: 167 TMDKAEELFNEMPER----NVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALVS 222

Query: 467 -----------------------------SWNSLIAGYQQLGQKNNALGVFRKMQSSC-- 495
                                        ++N+LIAGY Q G    A  +F ++   C  
Sbjct: 223 GLIQNDKLVEAERILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDC 282

Query: 496 -FYPNCVTILSVLPACAYLVASNKV--KEIHGCVLRR----------------------S 530
            +    V   + +  C Y+ A + V  +E+   ++ R                      +
Sbjct: 283 GYSRRNVISWNSMIMC-YVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASN 341

Query: 531 LESSLP-----VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
           L S +P       N +I  +++ G++  +  +F  +  K +++WNS+I GY  +  +  A
Sbjct: 342 LFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSLVSWNSMISGYEKNEDYKGA 401

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD--LGKKVFCSITECYQIIPMIEHYSAM 643
           +++F QM+  G KP+R T  SI+ A   AG+VD  LG ++   +T+ +  I  +   +++
Sbjct: 402 MNIFLQMQLEGKKPDRHTLSSILSA--CAGLVDLVLGTQIHQLVTKAF--IADLPINNSL 457

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
           + +Y R G + EA    ++M ++ D   W A++     HG    A  A++ LFDL
Sbjct: 458 VTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAYHG---FATEALQ-LFDL 508



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 121/256 (47%), Gaps = 4/256 (1%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSV 100
           A+ +   +  +G K  R+T  ++L AC     + L  ++H  +      D+ +   L+++
Sbjct: 401 AMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLVLGTQIHQLVTKAFIADLPINNSLVTM 460

Query: 101 YAKCGCLDDAREVFEDMR-ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           Y++CG + +AR VF++M  +R++ +W+AMIG Y+      E ++LF LM Q  + P    
Sbjct: 461 YSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAYHGFATEALQLFDLMKQCNVQPSYIT 520

Query: 160 FPKILQACGNCGDFEAGKL-MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
           F  +L AC + G  E G+   +S+V   G+        +++ +  + G+L  A     SM
Sbjct: 521 FISVLNACAHAGLIEEGRREFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSM 580

Query: 219 D-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
             E D   W +++ G  ++  N E  R   +   +        + +L   Y  +G+ D A
Sbjct: 581 PCEPDKAVWGALL-GACKVHNNVEMARAAAEALMKLQPESSAPYVLLHNMYADVGRWDDA 639

Query: 278 MEMVKRMESLGITPDV 293
            EM   ME   +  D 
Sbjct: 640 AEMRTMMEKNNVQKDA 655


>gi|298204516|emb|CBI23791.3| unnamed protein product [Vitis vinifera]
          Length = 615

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 197/568 (34%), Positives = 296/568 (52%), Gaps = 56/568 (9%)

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
           L+ +  M F+G++ +  T+   + +C DL  + MG  +H   +++G   D  VG SLI+M
Sbjct: 92  LEAYARMHFLGLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDM 151

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y KC                               G  G A +LF KM   D+     +W
Sbjct: 152 YVKC-------------------------------GVIGDARKLFDKMIVRDMA----SW 176

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM- 491
           N LI+GY++ G    A DLF+RM       RN  SW ++I+GY Q G    ALG+F +M 
Sbjct: 177 NALIAGYMKEGEIGVAEDLFERM-----EHRNIVSWTAMISGYTQNGFAEQALGLFDEML 231

Query: 492 -QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGN 550
              S   PN VTI+SVLPACA   A  + + IH       L  +  V  +L   YAK  +
Sbjct: 232 QDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYS 291

Query: 551 IVYSRTIFD--GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
           +V +R  FD    + K++I WN++I  Y  HG    A+ +F+ M   G++P+  TF+ ++
Sbjct: 292 LVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLL 351

Query: 609 LAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
              S +G++D G   F  +   + + P +EHY+ ++DL GR+G+L EA E I  MP++  
Sbjct: 352 SGCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMPMQAG 411

Query: 669 SSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKL 728
            S+W ALL ACR H N+++A LA  RLF LEP +     L+  +YA  G  E+  K+R L
Sbjct: 412 PSVWGALLAACRSHRNLEIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEEVKKLRAL 471

Query: 729 ERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--------TARS 780
            +    + S G  WIE+    + F+    S   +  +Y +L+ +PE +        T+  
Sbjct: 472 LKYQGMKKSPGCSWIEINGKSHLFMGADKSHPQAKEIYKFLEALPEKIKMAGYIPDTSFV 531

Query: 781 SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSM 840
            H    I EEEKE     HSEKLA+AF L+ +++    +R+ KN+R+C  CH   K++S 
Sbjct: 532 LHD---ISEEEKEYNLTTHSEKLAIAFGLL-NTRPGVVLRVTKNLRICGDCHAATKFISK 587

Query: 841 MHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           ++  EI + D    H FK+G CSCGDYW
Sbjct: 588 IYEREIIVRDLNRFHCFKDGSCSCGDYW 615



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 146/315 (46%), Gaps = 43/315 (13%)

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           GL  D+F  P +L++C +      G+ +H   +++G+     V  S++ +YVKCG +  A
Sbjct: 102 GLLGDNFTLPFVLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDA 161

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R+ F+ M  +D  +WN++I+GY + GE   A  LF++M    I    V++  +I  Y   
Sbjct: 162 RKLFDKMIVRDMASWNALIAGYMKEGEIGVAEDLFERMEHRNI----VSWTAMISGYT-- 215

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG--VMPNGV 329
                                            QNG   QAL LF EM   G  + PN V
Sbjct: 216 ---------------------------------QNGFAEQALGLFDEMLQDGSEMKPNWV 242

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           TI S + AC    AL  G  IH  A  +G   +  V  +L  MY+KC  L  A   FDMI
Sbjct: 243 TIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSLVEARCCFDMI 302

Query: 390 KD--KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
               K++ +WN+MI  Y   G   +A  +F  M  + V P+ +T+  L+SG   +G  D 
Sbjct: 303 AQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLSGCSHSGLIDA 362

Query: 448 AVDLFQRMGKNDKVK 462
            ++ F  MG    V+
Sbjct: 363 GLNHFNDMGTIHSVE 377



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 170/369 (46%), Gaps = 49/369 (13%)

Query: 63  LLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAR---------- 111
           +L++C D + + + R +H   L +  E D +V   L+ +Y KCG + DAR          
Sbjct: 113 VLKSCADLSRVCMGRCVHGQGLRVGLEGDFYVGASLIDMYVKCGVIGDARKLFDKMIVRD 172

Query: 112 ---------------------EVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
                                ++FE M  RN+ +W+AMI  Y+++    + + LF  M+Q
Sbjct: 173 MASWNALIAGYMKEGEIGVAEDLFERMEHRNIVSWTAMISGYTQNGFAEQALGLFDEMLQ 232

Query: 151 DG--LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           DG  + P+      +L AC      E G+ +H     +G+     V+ ++  +Y KC  L
Sbjct: 233 DGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNSSVQTALAGMYAKCYSL 292

Query: 209 IWARRFFE--SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           + AR  F+  + + K+ +AWN+MI+ Y   G   EA  +F+ M R  ++   VTF  L+ 
Sbjct: 293 VEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENMLRAGVQPDAVTFMGLLS 352

Query: 267 SYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             +  G  D  +     M ++  + P V  + C++    + GR  +A +L  +M     M
Sbjct: 353 GCSHSGLIDAGLNHFNDMGTIHSVEPRVEHYACVVDLLGRAGRLVEAKELISQMP----M 408

Query: 326 PNGVTITSA-ISACTDLKALAMGMEIHSLAVKMGFT-DDVLVGNSLI--NMYSKCEELEA 381
             G ++  A ++AC   + L    EI  LA +  F  +    GN ++  N+Y++    E 
Sbjct: 409 QAGPSVWGALLAACRSHRNL----EIAELAARRLFVLEPDNSGNYVLLSNLYAEAGMWEE 464

Query: 382 AERVFDMIK 390
            +++  ++K
Sbjct: 465 VKKLRALLK 473



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 106/205 (51%), Gaps = 9/205 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFLNLVT-EIDV 91
           NG   +A+ + D +   G++++ N  T +++L AC  S ++   R++H F N +   ++ 
Sbjct: 217 NGFAEQALGLFDEMLQDGSEMKPNWVTIVSVLPACAQSAALERGRRIHDFANGIGLHLNS 276

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRE--RNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
            V+T L  +YAKC  L +AR  F+ + +  +NL  W+ MI AY+      E V +F  M+
Sbjct: 277 SVQTALAGMYAKCYSLVEARCCFDMIAQNGKNLIAWNTMITAYASHGCGVEAVSIFENML 336

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRN--SVLAVYVKCGK 207
           + G+ PD   F  +L  C + G  +AG L H   +    S   RV +   V+ +  + G+
Sbjct: 337 RAGVQPDAVTFMGLLSGCSHSGLIDAG-LNHFNDMGTIHSVEPRVEHYACVVDLLGRAGR 395

Query: 208 LIWARRFFESMDEKDGVA-WNSMIS 231
           L+ A+     M  + G + W ++++
Sbjct: 396 LVEAKELISQMPMQAGPSVWGALLA 420


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  326 bits (835), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 195/578 (33%), Positives = 299/578 (51%), Gaps = 37/578 (6%)

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P      S I+AC   K LA    IH+   +     D  + NSLI+MY KC  +  A  V
Sbjct: 58  PTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHV 117

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG-- 443
           FD +  +DV SW  +IAGY Q     +A  L   M  +   PN  T+  L+      G  
Sbjct: 118 FDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGC 177

Query: 444 -------------NEDEAV-------DLFQRMGKNDK--------VKRNTASWNSLIAGY 475
                        N DE V       D++ R  + D         V +N  SWN+LIAG+
Sbjct: 178 SIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGF 237

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
            +       L  F +MQ + F     T  S+  A A + A  + + +H  +++   + + 
Sbjct: 238 ARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTA 297

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            V N+++  YAKSG++V +R +FD M  +D++TWN+++     +G    A+  F++++  
Sbjct: 298 FVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKC 357

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           G++ N+ TFLS++ A S  G+V  GK  F  + + Y + P I+HY + +DL GR+G L+E
Sbjct: 358 GIQLNQITFLSVLTACSHGGLVKEGKHYF-DMMKDYNVQPEIDHYVSFVDLLGRAGLLKE 416

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A+ F+  MP+EP +++W ALL ACR+H N  +   A + +F+L+P D     L+  IYA 
Sbjct: 417 ALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNIYAS 476

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN 775
            GK  DA +VRK+ +    +      W++++N V+ FV    +   S  +Y   + +   
Sbjct: 477 TGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPKSGDIYRMWEEINMR 536

Query: 776 V-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
           +        ++H  L I E+E+E     HSEK+ALAFALI +  A  +IRI+KNIR+C  
Sbjct: 537 IKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALI-NMPAGASIRIMKNIRICGD 595

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   KYVS +   EI + D+   HHF  G CSCGDYW
Sbjct: 596 CHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/447 (23%), Positives = 202/447 (45%), Gaps = 44/447 (9%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNL-VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           Y +++ AC    ++  AR +HA L+      D F+   L+ +Y KCG + DAR VF+ M 
Sbjct: 63  YHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMP 122

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
            R++ +W+ +I  Y+++    E + L   M++    P+ F F  +L+A G CG    G+ 
Sbjct: 123 SRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQ 182

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           MH+L +K        V +++L +Y +C ++  A   F+ +  K+ V+WN++I+G+ +  +
Sbjct: 183 MHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKAD 242

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD----VAMEMVKRMESL----GIT 290
            +     F +M R        T++ +  ++ ++G  +    V   ++K  + L    G T
Sbjct: 243 GETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNT 302

Query: 291 -----------------------PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
                                   D+ TW  M++  AQ G   +A+  F+E+   G+  N
Sbjct: 303 MLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLN 362

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVF 386
            +T  S ++AC+    +  G     +        ++    S +++  +   L EA   VF
Sbjct: 363 QITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVF 422

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGK----AYELFIKMQESDVPPNVITWNVLISGYIQN 442
            M  +     W +++ G C+     K    A +   ++   D  P V+ +N+    Y   
Sbjct: 423 KMPMEPTAAVWGALL-GACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNI----YAST 477

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTA-SW 468
           G  ++A  + ++M K   VK+  A SW
Sbjct: 478 GKWNDAARV-RKMMKATGVKKEPACSW 503


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 192/571 (33%), Positives = 301/571 (52%), Gaps = 37/571 (6%)

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           S I+AC   ++L     IH+      F   V + NSLI++Y KC  +  A RVFD +  +
Sbjct: 69  SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI--SGYIQNGNEDEAV- 449
           D+ SW S+IAGY Q     +A  L   M      PN  T+  L+  +G   +    E + 
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188

Query: 450 -------------------DLFQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKN 482
                              D++ R G+ D           +N  SWN+LIAG+ + G   
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
             L +F +MQ + F     T  SV  A A + A  + K +H  +++     S  V N+++
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
           D YAKSG+++ +R +FD +  KD++TWNS++  +  +G    A+  F++M+  G+  N+ 
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 603 TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           TFLSI+ A S  G+V  GK+ F  + E Y + P I+HY  ++DL GR+G L +A+ FI  
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427

Query: 663 MPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDA 722
           MP++P +++W ALL +CR+H N  +   A + +F+L+P D     L+  IYA  G+ + A
Sbjct: 428 MPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAA 487

Query: 723 LKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY-SW----LQNVPENVT 777
            +VRK+ +    +      W+E++N V+ FV    +   S+ +Y  W    +Q       
Sbjct: 488 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYV 547

Query: 778 ARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKY 837
             + +  L ++E+E++     HSEK+ALAFALI       TIRI+KNIR+C  CH   +Y
Sbjct: 548 PNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGA-TIRIMKNIRICGDCHSAFRY 606

Query: 838 VSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +S +   EI + D+   HHF +G CSCGDYW
Sbjct: 607 ISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 209/463 (45%), Gaps = 44/463 (9%)

Query: 44  VLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYA 102
            LDS+  +        Y +L+ AC    S+  AR +HA L        VF+   L+ +Y 
Sbjct: 51  TLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYC 110

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
           KCG + DAR VF+ M  R++ +W+++I  Y+++    E + L   M++    P+ F F  
Sbjct: 111 KCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFAS 170

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           +L+A G       G+ +H+L +K        V +++L +Y +CG++  A   F+ ++ K+
Sbjct: 171 LLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKN 230

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD----VAM 278
           GV+WN++I+G+ + G+ +    +F +M R   +    T++ +  +   +G  +    V  
Sbjct: 231 GVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHA 290

Query: 279 EMVKRMESLGI---------------------------TPDVFTWTCMISGFAQNGRTSQ 311
            M+K  E L                               DV TW  M++ FAQ G   +
Sbjct: 291 HMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGRE 350

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           A+  F+EM   GV  N +T  S ++AC+    +  G +   +  +     ++    ++++
Sbjct: 351 AVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVD 410

Query: 372 MYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK----AYELFIKMQESDVP 426
           +  +   L +A   +F M        W +++ G C+     K    A +   ++   D  
Sbjct: 411 LLGRAGLLNDALVFIFKMPMKPTAAVWGALL-GSCRMHKNAKIGQFAADHVFELDPDDTG 469

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
           P V+ +N+    Y   G  D A  + ++M K   VK+  A SW
Sbjct: 470 PPVLLYNI----YASTGQWDAAARV-RKMMKATGVKKEPACSW 507



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 170/361 (47%), Gaps = 5/361 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N   +EA+ +L  +     K    T+ +LL+A   S S  +  ++HA  +      DV+V
Sbjct: 143 NDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYV 202

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + LL +YA+CG +D A  VF+ +  +N  +W+A+I  ++R       + +F  M ++G 
Sbjct: 203 GSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGF 262

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
               F +  +  A    G  E GK +H+ +IK G      V N++L +Y K G +I AR+
Sbjct: 263 EATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARK 322

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ +D+KD V WNSM++ + Q G   EA   F++M +  + L  +TF  ++ + +  G 
Sbjct: 323 VFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGL 382

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
                +    M+   + P++  +  ++    + G  + AL    +M    + P      +
Sbjct: 383 VKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP---MKPTAAVWGA 439

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            + +C   K   +G        ++   DD      L N+Y+   + +AA RV  M+K   
Sbjct: 440 LLGSCRMHKNAKIGQFAADHVFELD-PDDTGPPVLLYNIYASTGQWDAAARVRKMMKATG 498

Query: 394 V 394
           V
Sbjct: 499 V 499



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 189/429 (44%), Gaps = 51/429 (11%)

Query: 212 RRFFESMDEKDGVA----WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           R   +S+D ++  A    ++S+I+   +    D+A  +   +   +    V   N LI  
Sbjct: 49  RDTLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHL 108

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           Y + G    A  +   M +     D+ +WT +I+G+AQN    +AL L   M      PN
Sbjct: 109 YCKCGAVADARRVFDGMPAR----DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPN 164

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
           G T  S + A     +  +G +IH+L VK  + DDV VG++L++MY++C  ++ A  VFD
Sbjct: 165 GFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFD 224

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------------- 432
            ++ K+  SWN++IAG+ + G       +F +MQ +       T+               
Sbjct: 225 QLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQ 284

Query: 433 --------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                               N ++  Y ++G+  +A  +F R+ K D V     +WNS++
Sbjct: 285 GKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVV-----TWNSML 339

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
             + Q G    A+  F +M+    + N +T LS+L AC++     + K+    +   +LE
Sbjct: 340 TAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLE 399

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT-WNSLICGYVLHGFWHAALDLFDQ 591
             +    +++D   ++G +  +      M  K     W +L+    +H   +A +  F  
Sbjct: 400 PEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHK--NAKIGQFAA 457

Query: 592 MKSFGLKPN 600
              F L P+
Sbjct: 458 DHVFELDPD 466



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 139/299 (46%), Gaps = 7/299 (2%)

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMG 456
           ++S+I    +      A  +   +  S    +V   N LI  Y + G   +A  +F  M 
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGM- 125

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
                 R+  SW SLIAGY Q    + ALG+   M    F PN  T  S+L A     +S
Sbjct: 126 ----PARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASS 181

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
              ++IH   ++      + V ++L+D YA+ G +  +  +FD + SK+ ++WN+LI G+
Sbjct: 182 GIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGF 241

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
              G     L +F +M+  G +    T+ S+  A +  G ++ GK V   + +  + +  
Sbjct: 242 ARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSA 301

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
               + ++D+Y +SG + +A + + D   + D   W ++LTA   +G    AV   E +
Sbjct: 302 FVG-NTILDMYAKSGSMIDARK-VFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEM 358


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 216/784 (27%), Positives = 401/784 (51%), Gaps = 90/784 (11%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           + ++ +YAKCG ++ A + F  + +R++  W++++  YSR     +V+  F  +   G+ 
Sbjct: 120 SAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVS 179

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+ F +  +L +C    D + GK +H  VIK+G         S++ +Y KCG L+ AR+ 
Sbjct: 180 PNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKI 239

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F+++ + D V+W +MI+GY Q+G  +EA ++F+ M +  +    V F  +I +   LG+ 
Sbjct: 240 FDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGLGRL 299

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
           D A ++  +M +     +V  W  MISG  + G   +A+D FK M   GV     T+ S 
Sbjct: 300 DDACDLFVQMPN----TNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSV 355

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           +SA   L+AL  G+ +H+ A+K G   +V VG+SLINMY+KCE++EAA++VFD + ++++
Sbjct: 356 LSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNL 415

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG---------------Y 439
             WN+M+ GY Q GY  K  +LF +M+     P+  T+  ++S                +
Sbjct: 416 VLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSF 475

Query: 440 IQNGN-------EDEAVDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNA 484
           I   N       E+  VD++ + G  ++ +        R+  SWN++I GY Q   ++ A
Sbjct: 476 IIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEA 535

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
             +FR+M      P+ V++ S+L  CA L A  + +++H  +++  L++ L   +SLID 
Sbjct: 536 FNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDM 595

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           Y K G I  +R +F  M S+ +++ N++I GY  +     A+DLF +M++ GL P+  TF
Sbjct: 596 YVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLVE-AIDLFQEMQNEGLNPSEITF 654

Query: 605 LSIILAHSLAGMVDLGKKVFCSITEC--------------------------------YQ 632
            S++ A +    ++LG+++ C I +                                 +Q
Sbjct: 655 ASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQ 714

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLTACRIHGNIDLAV 689
                  ++A+I  + ++G  EEA++  ++M      PD + + ++L AC I  ++    
Sbjct: 715 YPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGR 774

Query: 690 LAIERLFDLE-PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL 748
           +    +F +    D L    ++ +YA CG  + +++V   E   ++ +      I   ++
Sbjct: 775 MIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQV--FEEMGSKNDV-----ISWNSM 827

Query: 749 VYTFVTGGWSES----YSDLLYSWLQNVPENVT-----ARSSHSGLCIEEEEKEEISGIH 799
           +  F   G++E+    + ++ ++ ++  P++VT        SH+G   E  E  +I  +H
Sbjct: 828 IVGFAKNGYAENALKIFDEMKHTRIR--PDDVTFLGVLTACSHAGRVSEGREIFDIM-VH 884

Query: 800 SEKL 803
           S K+
Sbjct: 885 SYKI 888



 Score =  236 bits (601), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 185/739 (25%), Positives = 330/739 (44%), Gaps = 113/739 (15%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVK 94
           G L + I    S+   G    + TY  +L +C     I L +++H   + +  E + F +
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCE 220

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+ +Y+KCG L DAR++F+ + + +  +W+AMI  Y +     E +++F  M + GL 
Sbjct: 221 GSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLV 280

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD   F  ++ AC                                   V  G+L  A   
Sbjct: 281 PDQVAFVTVITAC-----------------------------------VGLGRLDDACDL 305

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK---------------LGVV 259
           F  M   + VAWN MISG+ + G + EA   F  M +  +K               L  +
Sbjct: 306 FVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEAL 365

Query: 260 TFNILIRSY-----------------NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
            + +L+ +                  N   +C+  ME  K++       ++  W  M+ G
Sbjct: 366 NYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCE-KMEAAKKVFDALDERNLVLWNAMLGG 424

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           +AQNG  S+ + LF EM   G  P+  T TS +SAC  L+ L MG ++HS  +K  F  +
Sbjct: 425 YAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYN 484

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           + V N+L++MY+KC  LE A + F+ I+++D  SWN++I GY Q     +A+ +F +M  
Sbjct: 485 LFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMIL 544

Query: 423 SDVPPNVITWNVLISG-----YIQNGNE-----------------DEAVDLFQRMGKNDK 460
             + P+ ++   ++SG      ++ G +                    +D++ + G  + 
Sbjct: 545 DGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEA 604

Query: 461 VK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
            +        R+  S N++IAGY Q      A+ +F++MQ+    P+ +T  S+L AC  
Sbjct: 605 ARYVFSCMPSRSVVSMNAIIAGYAQ-NDLVEAIDLFQEMQNEGLNPSEITFASLLDACTG 663

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMN-SLIDTYAKSGNIVYSRTIFDGMS-SKDIITWN 570
               N  ++IH  + +R L      +  SL+  Y  S     +  +F      K  I W 
Sbjct: 664 PYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWT 723

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC 630
           ++I G+  +G    AL L+ +M     +P++ TF S++ A S+   +  G+ +   I   
Sbjct: 724 AIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHV 783

Query: 631 YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
                 +   SA++D+Y + G ++ +++  E+M  + D   W +++     +G  + A+ 
Sbjct: 784 GLDSDELTG-SAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENAL- 841

Query: 691 AIERLFD------LEPGDV 703
              ++FD      + P DV
Sbjct: 842 ---KIFDEMKHTRIRPDDV 857



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 150/529 (28%), Positives = 260/529 (49%), Gaps = 44/529 (8%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           TY ++L AC     + + R+LH+F +    E ++FV+  L+ +YAKCG L++AR+ FE +
Sbjct: 452 TYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFI 511

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
           R R+  +W+A+I  Y +++   E   +F  M+ DG+ PD+     IL  C N    E G+
Sbjct: 512 RNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGE 571

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H  ++K G+       +S++ +YVKCG +  AR  F  M  +  V+ N++I+GY Q  
Sbjct: 572 QVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQ-- 629

Query: 238 END--EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD--- 292
            ND  EA  LF +M  E +    +TF  L+ +     + ++  ++   ++  G+  D   
Sbjct: 630 -NDLVEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDF 688

Query: 293 ------------------------------VFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
                                            WT +ISG  QNG + +AL L++EM   
Sbjct: 689 LGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRN 748

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
              P+  T  S + AC+ L +L  G  IHSL   +G   D L G+++++MY+KC +++++
Sbjct: 749 NARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSS 808

Query: 383 ERVFDMIKDK-DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
            +VF+ +  K DV SWNSMI G+ + GY   A ++F +M+ + + P+ +T+  +++    
Sbjct: 809 VQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSH 868

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G   E  ++F  M  + K+         +I    + G    A     K+    F PN +
Sbjct: 869 AGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLN---FEPNAM 925

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGN 550
              ++L AC       + +     ++    E+S P +  L + YA SGN
Sbjct: 926 IWATLLGACRIHGDDIRGRRAAEKLIELEPENSSPYV-LLSNIYAASGN 973



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 166/617 (26%), Positives = 290/617 (47%), Gaps = 86/617 (13%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL 98
           EAI    ++   G K  R+T  ++L A     +++    +HA  +      +V+V + L+
Sbjct: 332 EAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLI 391

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
           ++YAKC  ++ A++VF+ + ERNL  W+AM+G Y+++    +V++LF  M   G +PD+F
Sbjct: 392 NMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEF 451

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
            +  IL AC      E G+ +HS +IK        V N+++ +Y KCG L  AR+ FE +
Sbjct: 452 TYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFI 511

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------------- 261
             +D V+WN++I GY Q  + DEA  +F +M  + I    V+                  
Sbjct: 512 RNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGE 571

Query: 262 ------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
                             + LI  Y + G    A+E  + + S   +  V +   +I+G+
Sbjct: 572 QVHCFLVKSGLQTCLYAGSSLIDMYVKCG----AIEAARYVFSCMPSRSVVSMNAIIAGY 627

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT-DD 362
           AQN    +A+DLF+EM   G+ P+ +T  S + ACT    L +G +IH L  K G   D 
Sbjct: 628 AQNDLV-EAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDG 686

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
             +G SL+ MY   +    A+ +F   +  K    W ++I+G+ Q G   +A +L+ +M 
Sbjct: 687 DFLGVSLLVMYMNSQRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMH 746

Query: 422 ESDVPPNVITW-----------------------------------NVLISGYIQNGNED 446
            ++  P+  T+                                   + ++  Y + G+  
Sbjct: 747 RNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMK 806

Query: 447 EAVDLFQRMG-KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
            +V +F+ MG KND +     SWNS+I G+ + G   NAL +F +M+ +   P+ VT L 
Sbjct: 807 SSVQVFEEMGSKNDVI-----SWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLG 861

Query: 506 VLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-S 563
           VL AC++    ++ +EI   ++    +   L     +ID   + G +  +    D ++  
Sbjct: 862 VLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFE 921

Query: 564 KDIITWNSLICGYVLHG 580
            + + W +L+    +HG
Sbjct: 922 PNAMIWATLLGACRIHG 938



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 134/526 (25%), Positives = 257/526 (48%), Gaps = 51/526 (9%)

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           K +H+  +K G     R+ ++++ +Y KCG + +A + F  ++++D +AWNS++S Y + 
Sbjct: 101 KTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQ 160

Query: 237 GENDEA--------------------------HRLFDKMCREEIKLGVVTFNILIRSY-- 268
           G  ++                            RL D    +++  GV+       S+  
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCE 220

Query: 269 ----NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
               +   +C   ++  K  +++ + PD  +WT MI+G+ Q G   +AL +F++M  +G+
Sbjct: 221 GSLIDMYSKCGSLVDARKIFDAV-VDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGL 279

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK--CEELEAA 382
           +P+ V   + I+AC  L  L    +   L V+M  T +V+  N +I+ + K  C ++EA 
Sbjct: 280 VPDQVAFVTVITACVGLGRLDDACD---LFVQMPNT-NVVAWNVMISGHVKRGC-DIEAI 334

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA--YELFIKMQ--ESDVPPNVITWNVLISG 438
           +   +M K   V S  S +     A    +A  Y L +  Q  +  +  NV   + LI+ 
Sbjct: 335 DFFKNMWK-TGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINM 393

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
           Y +    + A  +F  +      +RN   WN+++ GY Q G  +  + +F +M+   F+P
Sbjct: 394 YAKCEKMEAAKKVFDALD-----ERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWP 448

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           +  T  S+L ACA L      +++H  +++ + E +L V N+L+D YAK G +  +R  F
Sbjct: 449 DEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQF 508

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           + + ++D ++WN++I GYV       A ++F +M   G+ P+  +  SI+   +    ++
Sbjct: 509 EFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALE 568

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
            G++V C + +   +   +   S++ID+Y + G +E A      MP
Sbjct: 569 QGEQVHCFLVKS-GLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMP 613



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/429 (22%), Positives = 189/429 (44%), Gaps = 106/429 (24%)

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           IH+  +K GF     +G++++++Y+KC  +E A + F+ ++ +D+ +WNS+++ Y + G 
Sbjct: 103 IHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSMYSRQGS 162

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLIS----------------GYIQNGN------EDE 447
             +    F  +Q   V PN  T+ +++S                G I+ G       E  
Sbjct: 163 LEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCEGS 222

Query: 448 AVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
            +D++ + G         +  V  +T SW ++IAGY Q+G    AL VF  MQ     P+
Sbjct: 223 LIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGLVPD 282

Query: 500 CVTILSVLPACAYL------------------VASNKVKEIH---GCVL----------R 528
            V  ++V+ AC  L                  VA N +   H   GC +          +
Sbjct: 283 QVAFVTVITACVGLGRLDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWK 342

Query: 529 RSLESSLPVMNSLIDTYA-----KSGNIVYSRTIFDGMSS-------------------- 563
             ++S+   + S++   A       G +V+++ I  G++S                    
Sbjct: 343 TGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEA 402

Query: 564 ----------KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
                     ++++ WN+++ GY  +G+    + LF +M+  G  P+  T+ SI+ A + 
Sbjct: 403 AKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACAC 462

Query: 614 AGMVDLGKKVFCSITE-CYQIIPMIEHYSAMIDLYGRSGKLEEA---MEFIEDMPIEPDS 669
              +++G+++   I +  ++    +E+   ++D+Y + G LEEA    EFI +     D+
Sbjct: 463 LECLEMGRQLHSFIIKHNFEYNLFVEN--TLVDMYAKCGALEEARQQFEFIRNR----DN 516

Query: 670 SIWEALLTA 678
             W A++  
Sbjct: 517 VSWNAIIVG 525



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 88/165 (53%), Gaps = 4/165 (2%)

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
           AS   K IH   L+    S   + ++++D YAK GN+ ++   F+ +  +DI+ WNS++ 
Sbjct: 96  ASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLS 155

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQI 633
            Y   G     +  F  +++ G+ PN+ T+  ++ + +    +DLGK+V C + +  ++ 
Sbjct: 156 MYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEF 215

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
               E   ++ID+Y + G L +A + I D  ++PD+  W A++  
Sbjct: 216 NSFCE--GSLIDMYSKCGSLVDARK-IFDAVVDPDTVSWTAMIAG 257


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 201/592 (33%), Positives = 313/592 (52%), Gaps = 55/592 (9%)

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV-GNSLI 370
           ALDL +  S V   P+    +  +  CT L  +  G  +H+  V   F D+ LV  N ++
Sbjct: 74  ALDLIQRGSLV---PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130

Query: 371 NMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
           NMY+KC  L+ A R+FD +  KD+ +W ++IAG+ Q      A  LF +M      PN  
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHF 190

Query: 431 TWNVLISGY-----IQNGNEDEA-----------------VDLFQRMGKNDKVK------ 462
           T + L+        +  G +  A                 VD++ R G  D  +      
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250

Query: 463 --RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
             ++  SWN+LI+G+ + G+  +AL +  KMQ   F P   T  SVL ACA + A  + K
Sbjct: 251 PTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGK 310

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
            +H  +++  L+    + N+L+D YAK+G+I  ++ +FD +   D+++WN+++ G   HG
Sbjct: 311 WVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHG 370

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
                LD F+QM   G++PN  +FL ++ A S +G++D G   F  + + Y++ P + HY
Sbjct: 371 LGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYF-ELMKKYKVEPDVPHY 429

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
              +DL GR G L+ A  FI +MPIEP +++W ALL ACR+H N++L V A ER F+L+P
Sbjct: 430 VTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDP 489

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT------ 754
            D   + L+  IYA  G+  D  KVRK+ +E+  +      W+E++N V+ FV       
Sbjct: 490 HDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHP 549

Query: 755 ------GGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFA 808
                 G W E    +    +  VP+     +SH  L ++++E+EE    HSEKLALAFA
Sbjct: 550 RIKEIRGKWEEISGKI--KEIGYVPD-----TSHVLLFVDQQEREEKLQYHSEKLALAFA 602

Query: 809 LIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNG 860
           L+ +      IRI KNIR+C  CH   K+VS +   EI + D+   H F++G
Sbjct: 603 LLNTPTG-SPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 216/452 (47%), Gaps = 49/452 (10%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VFVKTKLLSVYAKCGCLDDAREVFE 115
           N Y  LL+ C     +   R +HA L     +D  + ++  ++++YAKCGCLDDAR +F+
Sbjct: 88  NLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFD 147

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
           +M  +++ TW+A+I  +S++ R R+ + LF  M++ G  P+ F    +L+A G+    + 
Sbjct: 148 EMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDP 207

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +H+  +K G      V ++++ +Y +CG +  A+  F+ M  K  V+WN++ISG+ +
Sbjct: 208 GTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHAR 267

Query: 236 IGENDEAHRLFDKMCREEIK---------------------------------LGVVTF- 261
            GE + A  L  KM R+  +                                 L ++ F 
Sbjct: 268 KGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFI 327

Query: 262 -NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
            N L+  Y + G  D A  +  R+    + PDV +W  M++G AQ+G   + LD F++M 
Sbjct: 328 GNTLLDMYAKAGSIDDAKRVFDRL----VKPDVVSWNTMLTGCAQHGLGKETLDRFEQML 383

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
            +G+ PN ++    ++AC+    L  G+    L  K     DV    + +++  +   L+
Sbjct: 384 RIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLD 443

Query: 381 AAER-VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES--DVPPNVITWNVLIS 437
            AER + +M  +     W +++ G C+     K  EL +   E   ++ P+     +L+S
Sbjct: 444 RAERFIREMPIEPTAAVWGALL-GACR---MHKNMELGVYAAERAFELDPHDSGPRMLLS 499

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
               +      V   ++M K   VK+  A SW
Sbjct: 500 NIYASAGRWRDVAKVRKMMKESGVKKQPACSW 531



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 181/400 (45%), Gaps = 45/400 (11%)

Query: 148 MVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMHS-LVIKLGMSCVRRVRNSVLAVYVKC 205
           ++Q G L PD  L+ K+L+ C   G  E G+++H+ LV    +     ++N ++ +Y KC
Sbjct: 77  LIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKC 136

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G L  ARR F+ M  KD V W ++I+G+ Q     +A  LF +M R   +    T + L+
Sbjct: 137 GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLL 196

Query: 266 RS-----------------------------------YNQLGQCDVAMEMVKRMESLGIT 290
           ++                                   Y + G  D A      M     T
Sbjct: 197 KASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP----T 252

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
               +W  +ISG A+ G    AL L  +M      P   T +S +SAC  + AL  G  +
Sbjct: 253 KSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWV 312

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H+  +K G      +GN+L++MY+K   ++ A+RVFD +   DV SWN+M+ G  Q G  
Sbjct: 313 HAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLG 372

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
            +  + F +M    + PN I++  +++    +G  DE +  F+ M K  KV+ +   + +
Sbjct: 373 KETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKY-KVEPDVPHYVT 431

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            +    ++G  + A    R+M      P      ++L AC
Sbjct: 432 FVDLLGRVGLLDRAERFIREMP---IEPTAAVWGALLGAC 468


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 249/819 (30%), Positives = 384/819 (46%), Gaps = 134/819 (16%)

Query: 168 GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
           G+C   EA +L H   IK G      + N+++ +YV+ G L  A++ F+ M  ++ V W 
Sbjct: 111 GSCCSEEAREL-HLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWA 169

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEI----------------------KLGV------- 258
            +ISGY Q G+ DEA   F  M R                         KLGV       
Sbjct: 170 CLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLIS 229

Query: 259 --------VTFNILIRSYNQLGQC-DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT 309
                   V  N+LI  Y   G C D A +     + +GI   + +W  +IS +++ G  
Sbjct: 230 KTRYGSDVVVCNVLISMY---GSCLDSANDARSVFDGIGIRNSI-SWNSIISVYSRRGDA 285

Query: 310 SQALDLFKEMSFVGV----MPNGVTITSAISACTDLK-ALAMGMEIHSLAVKMGFTDD-V 363
             A DLF  M   G+     PN      A S  + L+     G E+H+  ++ G  D+ V
Sbjct: 286 VSAYDLFSSMQKEGLGFSFKPN-----DAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKV 340

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYS--------------------------- 396
            +GN L+NMY+K   +  A  VF+++ +KD  S                           
Sbjct: 341 AIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEY 400

Query: 397 ----WNSMIAGYCQA-GYCGKAYELFIKMQESDVPPNVITW------------------- 432
               WNS+I     +     +A + F++M       + +T+                   
Sbjct: 401 DQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQI 460

Query: 433 ----------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
                           N L+S Y + G  +E   +F RM +     R+  SWNS+I+GY 
Sbjct: 461 HALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSET----RDEVSWNSMISGYI 516

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
                + A+ +   M       +  T  ++L ACA +    +  E+H C +R  LES + 
Sbjct: 517 HNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVV 576

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           V ++L+D Y+K G I Y+   F+ M  +++ +WNS+I GY  HG    AL LF +M   G
Sbjct: 577 VGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDG 636

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
             P+  TF+ ++ A S  G V+ G + F S++E Y++ P +EH+S M+DL GR+GKL+E 
Sbjct: 637 QPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEV 696

Query: 657 MEFIEDMPIEPDSSIWEALLTA-CRIHG-NIDLAVLAIERLFDLEPGDVLIQRLILQIYA 714
            +FI  MP++P+  IW  +L A CR +G N +L   A E L +LEP + +   L+  +YA
Sbjct: 697 GDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYA 756

Query: 715 ICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPE 774
              K ED  K R   +E   +   G  W+ +K+ V+ FV G       DL+Y  L+ +  
Sbjct: 757 SGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNR 816

Query: 775 NV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCV 829
            +       ++ ++   +E E KEE+   HSEK+A+AF L   S  P  IRI+KN+R+C 
Sbjct: 817 KMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTRQSALP--IRIMKNLRVCG 874

Query: 830 HCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            CH    Y+S +   +I L DS   HHF++G+CSCGDYW
Sbjct: 875 DCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 155/621 (24%), Positives = 261/621 (42%), Gaps = 123/621 (19%)

Query: 1   FFIWILTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEA---ITVLDSIATQGAKVRR 57
           F  +  + F  L SLL K  NP      L  L  + + + +    T+  S  T       
Sbjct: 49  FTTFTASPFPPLKSLLFKPLNPNQCTKSLQDLVDHYKTSTSHCNTTLFSSSET------F 102

Query: 58  NTYINLLQACI---DSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVF 114
            + IN  Q      ++  +HL    + F+      ++F+   L+++Y + G L  A+++F
Sbjct: 103 ESLINRYQGSCCSEEARELHLQSIKYGFVG-----NLFLSNTLINIYVRIGDLGSAQKLF 157

Query: 115 EDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF- 173
           ++M  RNL TW+ +I  Y+++ +  E    F  MV+ G  P+ + F   L+AC   G   
Sbjct: 158 DEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSG 217

Query: 174 -EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC-GKLIWARRFFESMDEKDGVAWNSMIS 231
            + G  +H L+ K        V N ++++Y  C      AR  F+ +  ++ ++WNS+IS
Sbjct: 218 CKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIIS 277

Query: 232 GYFQIGENDEAHRLFDKMCREE-------------------------------IKLG--- 257
            Y + G+   A+ LF  M +E                                I+ G   
Sbjct: 278 VYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTGLND 337

Query: 258 --VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             V   N L+  Y + G    A  + + M    +  D  +W  +ISG  QN  +  A ++
Sbjct: 338 NKVAIGNGLVNMYAKSGAIADACSVFELM----VEKDSVSWNSLISGLDQNECSEDAAEM 393

Query: 316 FKEMS---------------------------FVGVMPNG-----VTITSAISACTDLKA 343
           F  M                            F+ +M  G     VT  + +SA + L  
Sbjct: 394 FSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSL 453

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWNSMIA 402
             +  +IH+L +K   +DD  +GN+L++ Y KC E+   E++F  M + +D  SWNSMI+
Sbjct: 454 HEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMIS 513

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-----GYIQNGNEDEA--------- 448
           GY       KA +L   M +     +  T+  ++S       ++ G E  A         
Sbjct: 514 GYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLES 573

Query: 449 --------VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
                   VD++ + G+ D           RN  SWNS+I+GY + G    AL +F +M 
Sbjct: 574 DVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMM 633

Query: 493 SSCFYPNCVTILSVLPACAYL 513
                P+ VT + VL AC+++
Sbjct: 634 LDGQPPDHVTFVGVLSACSHV 654



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 186/378 (49%), Gaps = 18/378 (4%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIH-LARKLHAF-LNLVTEIDVFVKT 95
           +++A+     +   G  + R T+IN+L A + S S+H ++ ++HA  L      D  +  
Sbjct: 419 VSQAVKYFLQMMRGGWGLSRVTFINILSA-VSSLSLHEVSHQIHALVLKYCLSDDTAIGN 477

Query: 96  KLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
            LLS Y KCG +++  ++F  M E R+  +W++MI  Y  ++   + ++L + M+Q G  
Sbjct: 478 ALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQR 537

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            D F F  IL AC +    E G  +H+  I+  +     V ++++ +Y KCG++ +A RF
Sbjct: 538 LDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRF 597

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           FE M  ++  +WNSMISGY + G  ++A +LF +M  +      VTF  ++ + + +G  
Sbjct: 598 FELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFV 657

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
           +   E  K M E   ++P V  ++CM+    + G+  +  D    M    + PN +   +
Sbjct: 658 EEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMP---MKPNVLIWRT 714

Query: 334 AISACTDLKALAMGMEIHSLAVKMGF---TDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
            + AC   +A     E+   A +M       + +    L NMY+  E+ E   +    +K
Sbjct: 715 VLGACC--RANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMK 772

Query: 391 DKDVY-----SWNSMIAG 403
           +  V      SW +M  G
Sbjct: 773 EAAVKKEAGCSWVTMKDG 790



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 114/483 (23%), Positives = 209/483 (43%), Gaps = 61/483 (12%)

Query: 47  SIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-------------AFLNLVTEIDVFV 93
           S+  +G +  R  + ++++  ++ N + +   L              +   L+ E D   
Sbjct: 314 SVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVS 373

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYS-RDQRWREVVELFFLMVQDG 152
              L+S   +  C +DA E+F  M E +  +W+++IGA S  +    + V+ F  M++ G
Sbjct: 374 WNSLISGLDQNECSEDAAEMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGG 433

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
                  F  IL A  +    E    +H+LV+K  +S    + N++L+ Y KCG++    
Sbjct: 434 WGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECE 493

Query: 213 RFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDK---MCREEIKLGVVTFNILIRSY 268
           + F  M E +D V+WNSMISGY     N+  H+  D    M ++  +L   TF  ++ + 
Sbjct: 494 KIFARMSETRDEVSWNSMISGYIH---NELLHKAMDLVWFMMQKGQRLDSFTFATILSAC 550

Query: 269 NQLGQCDVAMEM-------------------------------VKRMESLGITPDVFTWT 297
             +   +  ME+                                 R   L    +V++W 
Sbjct: 551 ASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWN 610

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVK 356
            MISG+A++G   +AL LF  M   G  P+ VT    +SAC+ +  +  G E   S++  
Sbjct: 611 SMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEV 670

Query: 357 MGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
              +  V   + ++++  +  +L E  + +  M    +V  W +++   C+A   G+  E
Sbjct: 671 YRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRAN--GRNTE 728

Query: 416 LFIKMQESDV---PPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SWNSL 471
           L  +  E  +   P N + + VL++    +G + E V   +   K   VK+    SW ++
Sbjct: 729 LGRRAAEMLLELEPQNAVNY-VLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTM 787

Query: 472 IAG 474
             G
Sbjct: 788 KDG 790



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           ++ S+I  Y  +    +A EL ++  +     N+   N LI+ Y++ G+   A  LF  M
Sbjct: 101 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 160

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
                  RN  +W  LI+GY Q G+ + A   FR M  + F PN     S L AC     
Sbjct: 161 SN-----RNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGP 215

Query: 516 SN-KVK-EIHGCVLRRSLESSLPVMNSLIDTYAK---SGNIVYSRTIFDGMSSKDIITWN 570
           S  K+  +IHG + +    S + V N LI  Y     S N   +R++FDG+  ++ I+WN
Sbjct: 216 SGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSAND--ARSVFDGIGIRNSISWN 273

Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGL----KPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
           S+I  Y   G   +A DLF  M+  GL    KPN       +L          G++V   
Sbjct: 274 SIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNDAFSEFSVLEEGRRK----GREVHAH 329

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           +         +   + ++++Y +SG + +A    E M +E DS  W +L++ 
Sbjct: 330 VIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELM-VEKDSVSWNSLISG 380



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 113/238 (47%), Gaps = 4/238 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           N  L++A+ ++  +  +G ++   T+  +L AC    ++    ++HA  +    E DV V
Sbjct: 518 NELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVV 577

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +Y+KCG +D A   FE M  RN+Y+W++MI  Y+R     + ++LF  M+ DG 
Sbjct: 578 GSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQ 637

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  +L AC + G  E G +   S+     +S      + ++ +  + GKL    
Sbjct: 638 PPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVG 697

Query: 213 RFFESMDEKDGV-AWNSMISGYFQI-GENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
            F  SM  K  V  W +++    +  G N E  R   +M  E      V + +L   Y
Sbjct: 698 DFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMY 755


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 224/748 (29%), Positives = 359/748 (47%), Gaps = 78/748 (10%)

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
           V NS+L +Y KCG +  ARR F+ M   +D V+W +M     + G   EA  L  +M   
Sbjct: 81  VANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLES 140

Query: 253 EIKLGVVTF---------NILIRSYNQ--LG--------QCDVA-----MEMVKRMESLG 288
            ++    T            L RS     LG          DV+     ++M  R   L 
Sbjct: 141 GLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLV 200

Query: 289 ITPDVFT---------WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
               VF          WT MI+ + Q G   +A++LF  M   G  P+G T++S +SAC 
Sbjct: 201 AARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACA 260

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE---ELEAAERVFDMIKDKDVYS 396
           +  +  +G ++HSL +++G   D  V   L++MY+K +    +E A +VF  +   +V S
Sbjct: 261 EQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMS 320

Query: 397 WNSMIAGYCQ-AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           W ++I+GY Q  G    A EL  +M    + PN +T++ L+       ++D    +  R+
Sbjct: 321 WTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARV 380

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM------------------------ 491
            K      N    N+L++ Y + G    A   F ++                        
Sbjct: 381 MKTSIGNVNVVG-NALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSS 439

Query: 492 --QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
             +S     +  T  S+L A A +    K +++H   ++   ES   + NSL+  Y++ G
Sbjct: 440 QIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCG 499

Query: 550 NIVYSRTIFDGMSS-KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
            +  +   FD M    ++I+W S+I     HG    AL LF  M   G+KPN  T+++++
Sbjct: 500 YLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVL 559

Query: 609 LAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
            A S  G+V  GK+ F S+ + +++IP +EHY+ M+DL  RSG ++EA+EFI +MP + D
Sbjct: 560 SACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKAD 619

Query: 669 SSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKL 728
           + +W+ LL ACR + NI++  +A   + DLEP D     L+  +YA  G  ++  ++R L
Sbjct: 620 ALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSL 679

Query: 729 ERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--------TARS 780
            R        G  W+ V N ++ F  G  S   +  +Y+ L  +   +        T+  
Sbjct: 680 MRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQEIYAKLAVLIREIKDIGYVPDTSIV 739

Query: 781 SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSM 840
            H    + ++ KE+    HSEK+A+AF LI ++     IRI KN+R+C  CH   KY+S 
Sbjct: 740 LHD---MSDKLKEQCLLQHSEKIAVAFGLI-TTLPTKPIRIFKNLRVCADCHSAIKYISK 795

Query: 841 MHHCEIFLADSKCLHHFKNGQCSCGDYW 868
               EI L DS   H  K+G+CSCG+YW
Sbjct: 796 STGREIILRDSNRFHRMKDGKCSCGEYW 823



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 115/466 (24%), Positives = 200/466 (42%), Gaps = 79/466 (16%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKC---GCLDDAREVF 114
           T  +++ AC +  S  L ++LH+  L L    D  V   L+ +Y K      ++ AR+VF
Sbjct: 251 TMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVF 310

Query: 115 EDMRERNLYTWSAMIGAYSR-DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF 173
           + M   N+ +W+A+I  Y +   +    VEL   M+ + + P+   +  +L+AC N  D 
Sbjct: 311 KRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQ 370

Query: 174 EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
           ++G+ +H+ V+K  +  V  V N+++++Y + G +  AR+ F+ + E++      ++S  
Sbjct: 371 DSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERN------LLSTS 424

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTF-------------------------------- 261
             IGE   ++  +     E + +GV TF                                
Sbjct: 425 SDIGETGRSNASWSSQI-ESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFES 483

Query: 262 -----NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 316
                N L+  Y++ G  D A      ME      +V +WT +IS  A++G   +AL LF
Sbjct: 484 DKGISNSLVSMYSRCGYLDDACRAFDEMED---DHNVISWTSIISALAKHGHAERALSLF 540

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-------HSLAVKM---GFTDDVLVG 366
            +M   GV PN VT  + +SAC+ +  +  G E        H L  +M       D+L  
Sbjct: 541 HDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLAR 600

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL----FIKMQE 422
           + L+         EA E + +M    D   W +++ G C+     +  E+     I ++ 
Sbjct: 601 SGLVQ--------EALEFINEMPCKADALVWKTLL-GACRTYENIEIGEIAARHVIDLEP 651

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
            D  P V+  N+    Y   G  DE   +   M   +  K    SW
Sbjct: 652 QDPAPYVLLSNL----YAHGGLWDEVARIRSLMRHRNLSKETGLSW 693



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 148/291 (50%), Gaps = 11/291 (3%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV- 91
           CG G+ N A+ +L  +  +  +    TY +LL+AC + +     R++HA +   +  +V 
Sbjct: 331 CG-GQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVN 389

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR-DQRWREVVELFFLMVQ 150
            V   L+S+YA+ GC+++AR+ F+ + ERNL + S+ IG   R +  W   +E   + V 
Sbjct: 390 VVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIESMDVGVS 449

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
                  F F  +L A    G    G+ +H+L IK G    + + NS++++Y +CG L  
Sbjct: 450 ------TFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDD 503

Query: 211 ARRFFESM-DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
           A R F+ M D+ + ++W S+IS   + G  + A  LF  M    +K   VT+  ++ + +
Sbjct: 504 ACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACS 563

Query: 270 QLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
            +G      E  + M+    + P +  + CM+   A++G   +AL+   EM
Sbjct: 564 HVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEM 614


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  325 bits (834), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 191/575 (33%), Positives = 309/575 (53%), Gaps = 46/575 (8%)

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           ++ C + +A+  G  +H+  +K  +   V +   LI +Y+KCE L  A  VFD +++++V
Sbjct: 17  LNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERNV 76

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS---------------GY 439
            SW +MI+GY Q G+  +A  LF++M  SD  PN  T+  ++S                +
Sbjct: 77  VSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSH 136

Query: 440 IQNGNEDEAV-------DLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNA 484
           I   N +  +       D++ + G+  + +        R+  S  ++I+GY QLG    A
Sbjct: 137 IFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEA 196

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           L +F ++Q      N VT  S+L A + L A +  K++H  VLR  L   + + NSLID 
Sbjct: 197 LELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDM 256

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG-LKPNRGT 603
           Y+K GN+ Y+R IF+ M  + +I+WN+++ GY  HG     + LF  M+    +KP+  T
Sbjct: 257 YSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVT 316

Query: 604 FLSIILAHSLAGMVDLGKKVFCSITECY-QIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           FL+++   S  G+ D G ++F  +     +I   IEHY  +IDL GR+G++EEA E I+ 
Sbjct: 317 FLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKK 376

Query: 663 MPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDA 722
           MP EP ++IW +LL ACR+H N ++      RL ++EP +     ++  +YA  G+ ED 
Sbjct: 377 MPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDV 436

Query: 723 LKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSH 782
             VR+L  E       G+ WIE+   ++TF     S    + ++  ++     +  +   
Sbjct: 437 RNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVR----ELLVKFKE 492

Query: 783 SGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHE 833
           SG           ++EE+KE+I   HSEKLALAF LI +S+    +R++KN+R+CV CH 
Sbjct: 493 SGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGV-PLRVIKNLRICVDCHN 551

Query: 834 TAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            AK+VS ++  ++ + D    HH   G CSCGDYW
Sbjct: 552 FAKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 223/470 (47%), Gaps = 57/470 (12%)

Query: 48  IATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFVKTKLLSVYAKCGC 106
           +A QG +++ + Y  LL  C++  ++   +++HA +     +  V++ T+L+ +Y KC C
Sbjct: 1   MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           L  AR VF++MRERN+ +W+AMI  YS+     E + LF  M++    P++F F  +L +
Sbjct: 61  LGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSS 120

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C     FE G+ +HS + K        V +S+L +Y K G++  AR  FE + E+D V+ 
Sbjct: 121 CTGFSGFELGRQIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSC 180

Query: 227 NSMISGYFQIGENDEAHRLFDKMCRE---------------------------------- 252
            ++ISGY Q+G ++EA  LF ++ RE                                  
Sbjct: 181 TAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLR 240

Query: 253 -EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQ 311
            E+   VV  N LI  Y++ G  + A ++   M        V +W  M+ G++++G+  +
Sbjct: 241 CELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMP----VRTVISWNAMLVGYSKHGKGIE 296

Query: 312 ALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG---- 366
            + LFK M     V P+ VT  + +S C+       G+E+    +  G  D++  G    
Sbjct: 297 VVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGG--DEIEAGIEHY 354

Query: 367 NSLINMYSKCEELEAAERVFDMIK----DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
             +I++  +   +E A   F++IK    +     W S++ G C+        E F+  + 
Sbjct: 355 GCVIDLLGRAGRVEEA---FELIKKMPFEPTAAIWGSLL-GACRVHSNTNIGE-FVGCRL 409

Query: 423 SDV-PPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
            ++ P N   + +L + Y   G  ++  ++ + M +   +K    SW  L
Sbjct: 410 LEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVIKEPGRSWIEL 459



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 158/308 (51%), Gaps = 9/308 (2%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           G  +EA+ +   +     +    T+  +L +C   +   L R++H+ +     E  +FV 
Sbjct: 90  GFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVG 149

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           + LL +YAK G + +AR VFE + ER++ + +A+I  Y++     E +ELF  + ++G+ 
Sbjct: 150 SSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQREGMS 209

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
            +   +  +L A       + GK +HS V++  +     ++NS++ +Y KCG L +AR+ 
Sbjct: 210 SNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYARKI 269

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE--IKLGVVTFNILIRSYNQLG 272
           F +M  +  ++WN+M+ GY + G+  E  +LF K+ REE  +K   VTF  ++   +  G
Sbjct: 270 FNNMPVRTVISWNAMLVGYSKHGKGIEVVKLF-KLMREENKVKPDSVTFLAVLSGCSHGG 328

Query: 273 QCDVAMEMVKRMESLG--ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
             D  +EM   M + G  I   +  + C+I    + GR  +A +L K+M F    P    
Sbjct: 329 LEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPF---EPTAAI 385

Query: 331 ITSAISAC 338
             S + AC
Sbjct: 386 WGSLLGAC 393



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 80/160 (50%), Gaps = 3/160 (1%)

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           +L  C    A  + + +H  +++      + +   LI  Y K   +  +R +FD M  ++
Sbjct: 16  LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERN 75

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
           +++W ++I GY   GF   AL LF QM     +PN  TF +++ + +     +LG+++  
Sbjct: 76  VVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHS 135

Query: 626 SI-TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
            I    Y+    +   S+++D+Y ++G++ EA    E +P
Sbjct: 136 HIFKRNYENHIFVG--SSLLDMYAKAGRIHEARGVFECLP 173


>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
 gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
          Length = 807

 Score =  325 bits (834), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 202/713 (28%), Positives = 354/713 (49%), Gaps = 43/713 (6%)

Query: 79  LHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRW 138
           L AF  L    +V+     +S   + G L  AR++   M +RN  +W+ +I A +R    
Sbjct: 65  LRAFRAL-PRPNVYSYNAAISAACRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSDSP 123

Query: 139 REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV 198
            E +E++  M+Q+GL P +F    +L ACG     + G+  H L +K+G+   + V N +
Sbjct: 124 GEALEMYRGMLQEGLAPTNFTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGL 183

Query: 199 LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV 258
           L +Y KCG +  A R F+ M   + V++ +M+ G  Q G  D+A RLF +M R  I++  
Sbjct: 184 LGMYTKCGSVADAVRLFDWMSSPNEVSFTAMMGGLAQSGAVDDALRLFARMSRSAIRVDP 243

Query: 259 VTFNILIRSYNQLGQCDV----AMEMVKRMESL----GITPDVFTWTCMISGFAQNGRTS 310
           V  + ++ +  Q    D     A+ + + + +L    G   D      +I  +A+  +  
Sbjct: 244 VAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMD 303

Query: 311 QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI 370
           +A+ +F+ MS V ++   + +T        L      +E+  L  + GF  + +  ++++
Sbjct: 304 EAMKVFESMSSVSIVSWNILVT----GYGQLGCYERALEVLDLMQESGFEPNEVTYSNML 359

Query: 371 NMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
               K  ++ +A  +FD I    V +WN++++GY Q        ELF +MQ  +V P+  
Sbjct: 360 ASCIKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRT 419

Query: 431 TWNVLIS-----GYIQNGNEDEA-----------------VDLFQRMGK--------NDK 460
           T  V++S     G ++ G +  +                 +D++ + G+        N  
Sbjct: 420 TLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMM 479

Query: 461 VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
            +R+   WNS+I+G         A   F++M+ +  +P   +  S++ +CA L +  + +
Sbjct: 480 TERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGR 539

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
           +IH  VL+   + ++ V +SLID YAK GN+  +R  F+ M  K+I+ WN +I GY  +G
Sbjct: 540 QIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVKNIVAWNEMIHGYAQNG 599

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
           F   A++LF+ M +   KP+  TF++++   S +G+VD     F S+   Y I P++EHY
Sbjct: 600 FGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHY 659

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
           + +ID  GR+G+  E +  I+ MP + D+ +WE LL AC +H N +L   A + LF L+P
Sbjct: 660 TCLIDALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDP 719

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFV 753
            +     L+  IYA  G+  DA  VR L          G  W+  K+    F+
Sbjct: 720 KNPSPYVLLSNIYATLGRHGDASAVRALMSSRGVVKGRGYSWVNHKDGARAFM 772



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 144/284 (50%), Gaps = 2/284 (0%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLL 98
           + I +   +  Q  +  R T   +L  C     + L +++H A + L+   D+FV + L+
Sbjct: 401 DTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLI 460

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +Y+KCG +  A+ +F  M ER++  W++MI   +      E  + F  M ++G+FP + 
Sbjct: 461 DMYSKCGQVGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTES 520

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
            +  ++ +C        G+ +H+ V+K G      V +S++ +Y KCG +  AR FF  M
Sbjct: 521 SYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCM 580

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
             K+ VAWN MI GY Q G  ++A  LF+ M   + K   VTF  ++   +  G  D A+
Sbjct: 581 IVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAI 640

Query: 279 EMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
                MES  GI P V  +TC+I    + GR ++ + +  +M +
Sbjct: 641 AYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAVIDKMPY 684



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 100/441 (22%), Positives = 185/441 (41%), Gaps = 92/441 (20%)

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           G   D  + N L+ +YS       A R F  +   +VYS+N+ I+  C+AG    A +L 
Sbjct: 40  GLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAARDLL 99

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN------------------- 458
            +M +     N ++WN +I+   ++ +  EA+++++ M +                    
Sbjct: 100 GRMPDR----NAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAV 155

Query: 459 ---DKVKR------------NTASWNSLIAGYQQLGQKNNALGVFRKMQS---------- 493
              D  +R            N    N L+  Y + G   +A+ +F  M S          
Sbjct: 156 AALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMM 215

Query: 494 ---------------------SCFYPNCVTILSVLPACAYLVASNK--------VKEIHG 524
                                S    + V + SVL ACA   A +          + IH 
Sbjct: 216 GGLAQSGAVDDALRLFARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHA 275

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
            V+R+  +S   V NSLID YAK   +  +  +F+ MSS  I++WN L+ GY   G +  
Sbjct: 276 LVVRKGFDSDQHVGNSLIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYER 335

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMI 644
           AL++ D M+  G +PN  T+ +++ +   A  V   + +F  I++     P +  ++ ++
Sbjct: 336 ALEVLDLMQESGFEPNEVTYSNMLASCIKARDVPSARAMFDKISK-----PSVTTWNTLL 390

Query: 645 DLYGRSGKLEEAMEFIEDMP---IEPDSSIWEALLTACRIHGNIDLA----VLAIERLFD 697
             YG+    ++ +E    M    ++PD +    +L+ C   G ++L       +++ L  
Sbjct: 391 SGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLH 450

Query: 698 LEPGDVLIQRLILQIYAICGK 718
               D+ +   ++ +Y+ CG+
Sbjct: 451 ---NDMFVASGLIDMYSKCGQ 468



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 139/347 (40%), Gaps = 76/347 (21%)

Query: 31  FLCGNGRLN---EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT 87
            + G G+L     A+ VLD +   G +    TY N+L +CI +  +              
Sbjct: 323 LVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIKARDV-------------- 368

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
                                 AR +F+ + + ++ TW+ ++  Y +++  ++ +ELF  
Sbjct: 369 --------------------PSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRR 408

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M    + PD      IL  C   G  E GK +HS  +KL +     V + ++ +Y KCG+
Sbjct: 409 MQHQNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQ 468

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------ 249
           +  A+  F  M E+D V WNSMISG      N+EA   F +M                  
Sbjct: 469 VGIAQIIFNMMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINS 528

Query: 250 -----------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
                             ++     V   + LI  Y + G  D A      M    I  +
Sbjct: 529 CARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFNCM----IVKN 584

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           +  W  MI G+AQNG   +A++LF+ M      P+ VT  + ++ C+
Sbjct: 585 IVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCS 631


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 206/631 (32%), Positives = 324/631 (51%), Gaps = 56/631 (8%)

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN-GRTSQALDLF 316
           V+  N LI SY + G  D A+ + + M+         TW  +++ FA+  G    A  LF
Sbjct: 41  VIASNKLIASYVRCGDIDSAVRVFEDMK----VKSTVTWNSILAAFAKKPGHFEYARQLF 96

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK--MGFTD-----DVLVGNSL 369
           +++      PN V+             + +    H L V    GF D     DV   N++
Sbjct: 97  EKIP----QPNTVSYN-----------IMLACHWHHLGVHDARGFFDSMPLKDVASWNTM 141

Query: 370 INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           I+  ++   +  A R+F  + +K+  SW++M++GY   G    A E F          +V
Sbjct: 142 ISALAQVGLMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMR----SV 197

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
           ITW  +I+GY++ G  + A  LFQ M       R   +WN++IAGY + G+  + L +FR
Sbjct: 198 ITWTAMITGYMKFGRVELAERLFQEMSM-----RTLVTWNAMIAGYVENGRAEDGLRLFR 252

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
            M  +   PN +++ SVL  C+ L A    K++H  V +  L S      SL+  Y+K G
Sbjct: 253 TMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCG 312

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
           ++  +  +F  +  KD++ WN++I GY  HG    AL LFD+MK  GLKP+  TF++++L
Sbjct: 313 DLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLL 372

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDS 669
           A + AG+VDLG + F ++   + I    EHY+ M+DL GR+GKL EA++ I+ MP +P  
Sbjct: 373 ACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHP 432

Query: 670 SIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLE 729
           +I+  LL ACRIH N++LA  A + L +L+P        +  +YA   + +    +R+  
Sbjct: 433 AIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSM 492

Query: 730 RENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC--- 786
           ++N      G  WIE+ ++V+ F +       SD L+  L ++ E +        L    
Sbjct: 493 KDNNVVKIPGYSWIEINSVVHGFRS-------SDRLHPELASIHEKLKDLEKKMKLAGYV 545

Query: 787 ---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKY 837
                    + EE KE++   HSEKLA+AF L+        IR+ KN+R+C  CH   KY
Sbjct: 546 PDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGV-PIRVFKNLRVCGDCHSATKY 604

Query: 838 VSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +S +   EI + D+   HHFK+G CSC DYW
Sbjct: 605 ISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 215/423 (50%), Gaps = 22/423 (5%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           +V    KL++ Y +CG +D A  VFEDM+ ++  TW++++ A+++     E     F  +
Sbjct: 40  NVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKI 99

Query: 150 QDGLFPDDFLFPKILQAC--GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
                P+   +  I+ AC   + G  +A     S+ +K   S      N++++   + G 
Sbjct: 100 PQ---PNTVSY-NIMLACHWHHLGVHDARGFFDSMPLKDVASW-----NTMISALAQVGL 150

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           +  ARR F +M EK+ V+W++M+SGY   G+ D A   F           V+T+  +I  
Sbjct: 151 MGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRS----VITWTAMITG 206

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           Y + G+ ++A  + + M    +     TW  MI+G+ +NGR    L LF+ M   GV PN
Sbjct: 207 YMKFGRVELAERLFQEMSMRTLV----TWNAMIAGYVENGRAEDGLRLFRTMLETGVKPN 262

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            +++TS +  C++L AL +G ++H L  K   + D   G SL++MYSKC +L+ A  +F 
Sbjct: 263 ALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFI 322

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
            I  KDV  WN+MI+GY Q G   KA  LF +M++  + P+ IT+  ++      G  D 
Sbjct: 323 QIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDL 382

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
            V  F  M ++  ++     +  ++    + G+ + A+ + + M    F P+     ++L
Sbjct: 383 GVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMP---FKPHPAIYGTLL 439

Query: 508 PAC 510
            AC
Sbjct: 440 GAC 442



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 155/326 (47%), Gaps = 19/326 (5%)

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           V   T +++ Y K G ++ A  +F++M  R L TW+AMI  Y  + R  + + LF  M++
Sbjct: 197 VITWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLE 256

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G+ P+      +L  C N    + GK +H LV K  +S       S++++Y KCG L  
Sbjct: 257 TGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKD 316

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A   F  +  KD V WN+MISGY Q G   +A RLFD+M +E +K   +TF  ++ + N 
Sbjct: 317 AWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNH 376

Query: 271 LGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G  D+ ++    M    GI      + CM+    + G+ S+A+DL K M F    P+  
Sbjct: 377 AGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPF---KPHPA 433

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN---SLINMYSKCEELEAAERVF 386
              + + AC   K L +       A K     D  +      L N+Y+     +    + 
Sbjct: 434 IYGTLLGACRIHKNLNLA----EFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIR 489

Query: 387 DMIKDKDV-----YSW---NSMIAGY 404
             +KD +V     YSW   NS++ G+
Sbjct: 490 RSMKDNNVVKIPGYSWIEINSVVHGF 515



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/393 (27%), Positives = 191/393 (48%), Gaps = 39/393 (9%)

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC-QAGYCGKAYELFIK 419
           ++V+  N LI  Y +C ++++A RVF+ +K K   +WNS++A +  + G+   A +LF K
Sbjct: 39  NNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEK 98

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           + +    PN +++N++++ +  +    +A   F  M   D      ASWN++I+   Q+G
Sbjct: 99  IPQ----PNTVSYNIMLACHWHHLGVHDARGFFDSMPLKD-----VASWNTMISALAQVG 149

Query: 480 QKNNALGVFRKMQSSCFYPNCVT---ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
                +G  R++ S+    NCV+   ++S   AC  L A+  V+  +   +R     S+ 
Sbjct: 150 ----LMGEARRLFSAMPEKNCVSWSAMVSGYVACGDLDAA--VECFYAAPMR-----SVI 198

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
              ++I  Y K G +  +  +F  MS + ++TWN++I GYV +G     L LF  M   G
Sbjct: 199 TWTAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETG 258

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA---MIDLYGRSGKL 653
           +KPN  +  S++L  S    + LGK+V   + +C    P+    +A   ++ +Y + G L
Sbjct: 259 VKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKC----PLSSDTTAGTSLVSMYSKCGDL 314

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIY 713
           ++A E    +P   D   W A+++    HG    A+    RLFD    + L    I  + 
Sbjct: 315 KDAWELFIQIP-RKDVVCWNAMISGYAQHGAGKKAL----RLFDEMKKEGLKPDWITFVA 369

Query: 714 AICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
            +       L    ++  NT R  FG   IE K
Sbjct: 370 VLLACNHAGLVDLGVQYFNTMRRDFG---IETK 399



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/391 (20%), Positives = 161/391 (41%), Gaps = 17/391 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NGR  + + +  ++   G K    +  ++L  C + +++ L +++H  +       D   
Sbjct: 241 NGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTA 300

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+S+Y+KCG L DA E+F  +  +++  W+AMI  Y++    ++ + LF  M ++GL
Sbjct: 301 GTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGL 360

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  +L AC + G  + G +  +++    G+         ++ +  + GKL  A 
Sbjct: 361 KPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAV 420

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
              +SM  K   A    + G  +I +N        K   E        +  L   Y    
Sbjct: 421 DLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPTIATGYVQLANVYAAQN 480

Query: 273 QCDVAMEMVKRMESLGITP-DVFTW---TCMISGFAQNGRTSQAL--------DLFKEMS 320
           + D    + + M+   +     ++W     ++ GF  + R    L        DL K+M 
Sbjct: 481 RWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPELASIHEKLKDLEKKMK 540

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL-VGNSLINMYSKCEEL 379
             G +P+   +   +    +LK   +      LA+  G     L V   +      C + 
Sbjct: 541 LAGYVPDLEFVLHDVG--EELKEQLLLWHSEKLAIAFGLLKVPLGVPIRVFKNLRVCGDC 598

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
            +A +    I+ +++   ++    + + G+C
Sbjct: 599 HSATKYISTIEGREIIVRDTTRFHHFKDGFC 629


>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic; Flags: Precursor
 gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
 gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 752

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 215/718 (29%), Positives = 349/718 (48%), Gaps = 56/718 (7%)

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS-----MISGYFQIGENDEAHRLFD 247
           +V N  L    K  KL  A  F + MD K GV+ +S     +     ++        L D
Sbjct: 49  QVENLHLVSLSKHRKLNEAFEFLQEMD-KAGVSVSSYSYQCLFEACRELRSLSHGRLLHD 107

Query: 248 KMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
           +M        V+  N +++ Y +    + A ++   M  L    +  + T MIS +A+ G
Sbjct: 108 RMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSEL----NAVSRTTMISAYAEQG 163

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
              +A+ LF  M   G  P     T+ + +  + +AL  G +IH+  ++ G   +  +  
Sbjct: 164 ILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIET 223

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
            ++NMY KC  L  A+RVFD +  K   +   ++ GY QAG    A +LF+ +    V  
Sbjct: 224 GIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEW 283

Query: 428 NVITWNV-----------------------------------LISGYIQNGNEDEAVDLF 452
           +   ++V                                   L+  YI+  + + A   F
Sbjct: 284 DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAF 343

Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS-SCFYPNCVTILSVLPACA 511
           Q + +      N  SW+++I+GY Q+ Q   A+  F+ ++S +    N  T  S+  AC+
Sbjct: 344 QEIREP-----NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACS 398

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
            L   N   ++H   ++RSL  S    ++LI  Y+K G +  +  +F+ M + DI+ W +
Sbjct: 399 VLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTA 458

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
            I G+  +G    AL LF++M S G+KPN  TF++++ A S AG+V+ GK    ++   Y
Sbjct: 459 FISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKY 518

Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
            + P I+HY  MID+Y RSG L+EA++F+++MP EPD+  W+  L+ C  H N++L  +A
Sbjct: 519 NVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIA 578

Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
            E L  L+P D     L   +Y   GK E+A ++ KL  E   +      WI+ K  ++ 
Sbjct: 579 GEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHR 638

Query: 752 FVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIG 811
           F+ G      +  +Y  L+     +         C   E +E++   HSE+LA+AF LI 
Sbjct: 639 FIVGDKHHPQTQEIYEKLKEFDGFMEGDMFQ---CNMTERREQLLD-HSERLAIAFGLIS 694

Query: 812 -SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
               AP  I++ KN+R C  CHE AK+VS++   EI + DS+  HHFK G+CSC DYW
Sbjct: 695 VHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 134/540 (24%), Positives = 250/540 (46%), Gaps = 37/540 (6%)

Query: 23  RFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF 82
           +  + HL  L  + +LNEA   L  +   G  V   +Y  L +AC +  S+   R LH  
Sbjct: 49  QVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR 108

Query: 83  LNL-VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           + + +    V ++  +L +Y +C  L+DA ++F++M E N  + + MI AY+      + 
Sbjct: 109 MRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKA 168

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
           V LF  M+  G  P   ++  +L++  N    + G+ +H+ VI+ G+     +   ++ +
Sbjct: 169 VGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNM 228

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           YVKCG L+ A+R F+ M  K  VA   ++ GY Q G   +A +LF  +  E ++     F
Sbjct: 229 YVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVF 288

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGI-------------------------------T 290
           ++++++   L + ++  ++   +  LG+                                
Sbjct: 289 SVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIRE 348

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGME 349
           P+  +W+ +ISG+ Q  +  +A+  FK + S    + N  T TS   AC+ L    +G +
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQ 408

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H+ A+K          ++LI MYSKC  L+ A  VF+ + + D+ +W + I+G+   G 
Sbjct: 409 VHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGN 468

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
             +A  LF KM    + PN +T+  +++     G  ++       M +   V      ++
Sbjct: 469 ASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYD 528

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
            +I  Y + G  + AL   + M    F P+ ++    L  C +   + ++ EI G  LR+
Sbjct: 529 CMIDIYARSGLLDEALKFMKNMP---FEPDAMSWKCFLSGC-WTHKNLELGEIAGEELRQ 584



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 173/360 (48%), Gaps = 7/360 (1%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
           GR  +A+ +   + T+G +     +  +L+AC     ++L +++HA +  L  E +V V 
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF-FLMVQDGL 153
           T L+  Y KC   + A   F+++RE N  +WSA+I  Y +  ++ E V+ F  L  ++  
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             + F +  I QAC    D   G  +H+  IK  +   +   ++++ +Y KCG L  A  
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANE 443

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            FESMD  D VAW + ISG+   G   EA RLF+KM    +K   VTF  ++ + +  G 
Sbjct: 444 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 503

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            +     +  M     + P +  + CMI  +A++G   +AL   K M F    P+ ++  
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPF---EPDAMSWK 560

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
             +S C   K L +G EI    ++    +D        N+Y+   + E A  +  ++ ++
Sbjct: 561 CFLSGCWTHKNLELG-EIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNER 619


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 212/687 (30%), Positives = 349/687 (50%), Gaps = 72/687 (10%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           MV+ G+  DD  FP +L+ C +  D   G  +H +V KLG      V N++L +Y  CG 
Sbjct: 1   MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF--------------------- 246
           L  ARR F+ M E+D V+WN++I      G+  EA   +                     
Sbjct: 61  LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120

Query: 247 -------DKMCRE----EIKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
                  ++M R      +K+G    V T N L+ +Y + G      ++        +  
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNET----VEK 176

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           +  +W  +I+G A  GR   AL+ F+ M   G  PN VTI+S +    +L+    G EIH
Sbjct: 177 NEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIH 236

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
             +++MG   D+ + NSLI+MY+K      A  +F  +  +++ SWN+MIA Y       
Sbjct: 237 GFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPL 296

Query: 412 KAYELFIKMQESDVPPNVITW-NVLIS----GYIQNGNEDEA-----------------V 449
           +A    I+MQE+   PN +T+ NVL +    G++  G E  A                 +
Sbjct: 297 EAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLI 356

Query: 450 DLFQRMG-----KN--DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           D++ + G     +N  +  +++  S+N LI GY +      +L +F +M+     P+ V+
Sbjct: 357 DMYAKCGCLHSARNVFNTSRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVS 416

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
            + V+ ACA L A  + KE+HG  LR  L S L V NSL+D Y K G I  +  +F+ + 
Sbjct: 417 FVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQIL 476

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            KD+ +WN++I GY + G    A+ +F+ M+   ++ +  ++++++ A S  G+V+ G +
Sbjct: 477 FKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQ 536

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F  +    ++ P   HY+ M+DL GR+G +EEA + I+ +PI PD++IW ALL ACRI+
Sbjct: 537 YFSEML-AQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIY 595

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
           GN++L   A E LF+L+P       L+  IYA  G+ ++A K+R+L +    + + G  W
Sbjct: 596 GNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSW 655

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWL 769
           +++ + V+ FV     E +   L  WL
Sbjct: 656 VQIYDQVHAFVAEERVEGFE--LGDWL 680



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 160/650 (24%), Positives = 282/650 (43%), Gaps = 99/650 (15%)

Query: 51  QGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDD 109
           +G ++  +T+  +L+ C DS  I    ++H  +  L  + DV+V   LL +Y  CG L+D
Sbjct: 4   RGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLND 63

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF-PDDFLFPKILQACG 168
           AR +F++M ER++ +W+ +IG  S +  + E    +F M+   +  P+      +L    
Sbjct: 64  ARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISA 123

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
              D E  + +H   +K+G+       N+++  Y KCG +    + F    EK+ V+WNS
Sbjct: 124 ALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNS 183

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
           +I+G    G   +A   F  M     +   VT + ++    +L       E+      +G
Sbjct: 184 IINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMG 243

Query: 289 ITPDVF-------------------------------TWTCMISGFAQNGRTSQALDLFK 317
              D+F                               +W  MI+ +A N    +A+    
Sbjct: 244 TETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVI 303

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
           +M   G  PN VT T+ + AC  L  L  G EIH++ V++G T D+ V NSLI+MY+KC 
Sbjct: 304 QMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCG 363

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
            L +A  VF+  + KD  S+N +I GY +   C ++  LF +M+     P+V+++  +IS
Sbjct: 364 CLHSARNVFNTSR-KDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVIS 422

Query: 438 -----GYIQNGNEDEAV-----------------DLFQRMGK--------NDKVKRNTAS 467
                  ++ G E   V                 D + + G+        N  + ++ AS
Sbjct: 423 ACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVAS 482

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           WN++I GY  +G+   A+ +F  M+      + V+ ++VL AC++     +  +    +L
Sbjct: 483 WNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEML 542

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLI------------- 573
            + LE +      ++D   ++G +  +  +   +  + D   W +L+             
Sbjct: 543 AQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGR 602

Query: 574 -------------CGYVL--------HGFWHAALDLFDQMKSFGLKPNRG 602
                        CGY +         G W  A  + + MKS G K N G
Sbjct: 603 RAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPG 652



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/493 (22%), Positives = 211/493 (42%), Gaps = 51/493 (10%)

Query: 17  TKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA 76
           T + N    ++ ++ L   GR  +A+     +   GA+    T  ++L   ++       
Sbjct: 173 TVEKNEVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAG 232

Query: 77  RKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           +++H F + + TE D+F+   L+ +YAK G   +A  +F ++  RN+ +W+AMI  Y+ +
Sbjct: 233 KEIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALN 292

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
           +   E +     M + G  P+   F  +L AC   G    GK +H++ +++G++    V 
Sbjct: 293 RLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVS 352

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           NS++ +Y KCG L  AR  F +   KD V++N +I GY +  +  ++  LF +M     K
Sbjct: 353 NSLIDMYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKK 411

Query: 256 LGVVTF-----------------------------------NILIRSYNQLGQCDVAMEM 280
             VV+F                                   N L+  Y + G+ D+A  +
Sbjct: 412 PDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRL 471

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
             ++    +  DV +W  MI G+   G    A+ +F+ M    V  + V+  + +SAC+ 
Sbjct: 472 FNQI----LFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSH 527

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNS 399
              +  G +  S  +        +    ++++  +   +E A ++   +    D   W +
Sbjct: 528 GGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGA 587

Query: 400 MIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-YIQNGNEDEAVDLFQRM 455
           ++     Y       +A E   +++     P    + +L+S  Y + G  DEA  + + M
Sbjct: 588 LLGACRIYGNVELGRRAAEHLFELK-----PQHCGYYILLSNIYAETGRWDEANKIRELM 642

Query: 456 GKNDKVKRNTASW 468
                 K    SW
Sbjct: 643 KSRGAKKNPGCSW 655


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  325 bits (833), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 184/619 (29%), Positives = 324/619 (52%), Gaps = 47/619 (7%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P +F W  +I G+++N     AL ++  M    V P+  T    + AC+ L  L MG  +
Sbjct: 82  PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD--MIKDKDVYSWNSMIAGYCQAG 408
           H+   ++GF  DV V N LI +Y+KC  L +A  VF+   + ++ + SW ++++ Y Q G
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGY--IQNGNEDEAVD---------------- 450
              +A E+F  M++ DV P+ +    +++ +  +Q+  +  ++                 
Sbjct: 202 EPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261

Query: 451 ----LFQRMGKN-------DKVKR-NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
               ++ + G+        DK+K  N   WN++I+GY + G    A+ +F +M +    P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           + ++I S + ACA + +  + + ++  V R      + + ++LID +AK G++  +R +F
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           D    +D++ W+++I GY LHG    A+ L+  M+  G+ PN  TFL +++A + +GMV 
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            G   F  + + ++I P  +HY+ +IDL GR+G L++A E I+ MP++P  ++W ALL+A
Sbjct: 442 EGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
           C+ H +++L   A ++LF ++P +      +  +YA     +   +VR   +E       
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560

Query: 739 GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEE 789
           G  W+EV+  +  F  G  S       Y  ++   E + +R    G           + +
Sbjct: 561 GCSWVEVRGRLEAFRVGDKSHPR----YEEIERQVEWIESRLKEGGFVANKDASLHDLND 616

Query: 790 EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
           EE EE    HSE++A+A+ LI + Q    +RI KN+R CV+CH   K +S +   EI + 
Sbjct: 617 EEAEETLCSHSERIAIAYGLISTPQGT-PLRITKNLRACVNCHAATKLISKLVDREIVVR 675

Query: 850 DSKCLHHFKNGQCSCGDYW 868
           D+   HHFK+G CSCGDYW
Sbjct: 676 DTNRFHHFKDGVCSCGDYW 694



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 230/472 (48%), Gaps = 46/472 (9%)

Query: 77  RKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           +++HA  L L  +   F+ TKL+   +  G +  AR+VF+D+    ++ W+A+I  YSR+
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
             +++ + ++  M    + PD F FP +L+AC      + G+ +H+ V +LG      V+
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 196 NSVLAVYVKCGKLIWARRFFE--SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---- 249
           N ++A+Y KC +L  AR  FE   + E+  V+W +++S Y Q GE  EA  +F  M    
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217

Query: 250 ----------------CREEIKLG------VVTFNILIRS---------YNQLGQCDVAM 278
                           C +++K G      VV   + I           Y + GQ   A 
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 279 EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
            +  +M+S    P++  W  MISG+A+NG   +A+D+F EM    V P+ ++ITSAISAC
Sbjct: 278 ILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISAC 333

Query: 339 TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN 398
             + +L     ++    +  + DDV + ++LI+M++KC  +E A  VFD   D+DV  W+
Sbjct: 334 AQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWS 393

Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
           +MI GY   G   +A  L+  M+   V PN +T+  L+     +G   E    F  M  +
Sbjct: 394 AMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNLMA-D 452

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            K+      +  +I    + G  + A  V + M      P      ++L AC
Sbjct: 453 HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQ---PGVTVWGALLSAC 501



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 188/414 (45%), Gaps = 68/414 (16%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE-- 115
           T+ +LL+AC   + + + R +HA    L  + DVFV+  L+++YAKC  L  AR VFE  
Sbjct: 121 TFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGL 180

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            + ER + +W+A++ AY+++    E +E+F  M +  + PD      +L A     D + 
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQ 240

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G+ +H+ V+K+G+     +  S+  +Y KCG++  A+  F+ M   + + WN+MISGY +
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF- 294
            G   EA  +F +M  ++++   ++    I +  Q+G  + A  M + +       DVF 
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360

Query: 295 ------------------------------TWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
                                          W+ MI G+  +GR  +A+ L++ M   GV
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            PN VT    + AC            HS  V+ G+    L+ +  IN      + +    
Sbjct: 421 HPNDVTFLGLLMACN-----------HSGMVREGWWFFNLMADHKIN-----PQQQHYAC 464

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           V D++                +AG+  +AYE+   M    V P V  W  L+S 
Sbjct: 465 VIDLLG---------------RAGHLDQAYEVIKCMP---VQPGVTVWGALLSA 500



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 162/362 (44%), Gaps = 14/362 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG   EA+ +   +     K      +++L A      +   R +HA  + +  EI+  +
Sbjct: 200 NGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L ++YAKCG +  A+ +F+ M+  NL  W+AMI  Y+++   RE +++F  M+   +
Sbjct: 260 LISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD       + AC   G  E  + M+  V +        + ++++ ++ KCG +  AR 
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+   ++D V W++MI GY   G   EA  L+  M R  +    VTF  L+ + N  G 
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGM 439

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
                     M    I P    + C+I    + G   QA ++ K M    V P GVT+  
Sbjct: 440 VREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP---VQP-GVTVWG 495

Query: 334 A-ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           A +SAC   + + +G      A +  F+ D     S    Y +   L AA R++D + + 
Sbjct: 496 ALLSACKKHRHVELG----EYAAQQLFSID----PSNTGHYVQLSNLYAAARLWDRVAEV 547

Query: 393 DV 394
            V
Sbjct: 548 RV 549



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 93/188 (49%), Gaps = 8/188 (4%)

Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
           ++K+IH  +L   L+ S  ++  LI   +  G+I ++R +FD +    I  WN++I GY 
Sbjct: 36  QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPM 636
            +  +  AL ++  M+   + P+  TF  ++ A S    + +G+ V   +    +     
Sbjct: 96  RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI--WEALLTACRIHGNI--DLAVLAI 692
           ++  + +I LY +  +L  A    E +P+ P+ +I  W A+++A   +G     L + + 
Sbjct: 156 VQ--NGLIALYAKCRRLGSARTVFEGLPL-PERTIVSWTAIVSAYAQNGEPMEALEIFSH 212

Query: 693 ERLFDLEP 700
            R  D++P
Sbjct: 213 MRKMDVKP 220


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  325 bits (833), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 197/617 (31%), Positives = 312/617 (50%), Gaps = 46/617 (7%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           + F +  MI G     R + A+ L+  M    ++P+  T +  + AC  L    +G+ IH
Sbjct: 68  NTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIH 127

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           SL  K GF  DV V  +++  YSKC  L  A +VFD +  K+V SW  MI G  + G   
Sbjct: 128 SLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFR 187

Query: 412 KAYELFIKMQESDVPP-----------------------------------NVITWNVLI 436
           +A +LF  + ES + P                                   NV     L+
Sbjct: 188 EAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLV 247

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
             Y + G+ +EA  +F  M     V+++   W+++I GY   G    A+ +F +M+    
Sbjct: 248 DMYTKCGSMEEARFVFDGM-----VEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNV 302

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            P+C  ++  L +CA L A        G +      S+  +  SLID YAK G++  +  
Sbjct: 303 RPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALG 362

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           ++  M  KD + +N++I G  ++G   AA  +F QM  FG+ PN  TF+ ++   + AG+
Sbjct: 363 VYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGL 422

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           VD G+  F S++  + + P IEHY  M+DL  R+G L+EA   I+ MP++ +  +W +LL
Sbjct: 423 VDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLL 482

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
             CR+H    LA   +++L +LEP +     L+  IY+   + ++A K+R    E   + 
Sbjct: 483 GGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQK 542

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSG-----LCIEEEE 791
             G  W+EV  +V+ F+ G  S   S  +Y  L+++ +++     +         +EEEE
Sbjct: 543 LPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFVLFDVEEEE 602

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           KE   G HSEKLA+AFALI S+ A + IR+VKN+R+C  CHE  K++S +   EI + D+
Sbjct: 603 KEHFLGCHSEKLAVAFALI-STGAKYVIRVVKNLRVCGDCHEAIKHISKVTGREIVIRDN 661

Query: 852 KCLHHFKNGQCSCGDYW 868
              H F +G CSC DYW
Sbjct: 662 NRFHCFSDGACSCRDYW 678



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 213/487 (43%), Gaps = 43/487 (8%)

Query: 20  SNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKL 79
           SN    +T +  +    R N A+ +  S+          T+  +L+AC   N  HL   +
Sbjct: 67  SNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMI 126

Query: 80  HAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRW 138
           H+ +     + DVFVKT ++  Y+KCG L DA +VF+DM  +N+ +W+ MI       ++
Sbjct: 127 HSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKF 186

Query: 139 REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV 198
           RE V+LF  +++ GL PD F+  ++L+AC   GD E+G+ +   + + G+S    V  S+
Sbjct: 187 REAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSL 246

Query: 199 LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR------- 251
           + +Y KCG +  AR  F+ M EKD V W++MI GY   G   EA  LF +M +       
Sbjct: 247 VDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDC 306

Query: 252 ----------------------------EEIKLGVVTFNILIRSYNQLGQCDVAMEMVKR 283
                                       EE     V    LI  Y + G  + A+ + K 
Sbjct: 307 YAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKM 366

Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
           M+      D   +  +ISG A  G+   A  +F +M   G+ PN  T    +  CT    
Sbjct: 367 MKE----KDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGL 422

Query: 344 LAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMI 401
           +  G    +S++     T  +     ++++ ++   L+ A  +   M    +V  W S++
Sbjct: 423 VDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLL 482

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
            G C+     +  E  +K      P N   + +L + Y  +   DEA  +   + +    
Sbjct: 483 GG-CRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQ 541

Query: 462 KRNTASW 468
           K    SW
Sbjct: 542 KLPGYSW 548



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/485 (23%), Positives = 205/485 (42%), Gaps = 76/485 (15%)

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
           F ++    +   +N+MI G       + A  L+  M +  I     TF+ ++++  +L  
Sbjct: 60  FHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNL 119

Query: 274 CDVAMEMVKRMESLGITPDVF-------------------------------TWTCMISG 302
             + + +   +   G   DVF                               +WT MI G
Sbjct: 120 FHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICG 179

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
             + G+  +A+DLF+ +   G+ P+G  I   + AC  L  L  G  I     + G + +
Sbjct: 180 CIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRN 239

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V V  SL++MY+KC  +E A  VFD + +KD+  W++MI GY   G   +A ELF +M++
Sbjct: 240 VFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRK 299

Query: 423 SDVPP-----------------------------------NVITWNVLISGYIQNGNEDE 447
            +V P                                   N +    LI  Y + G+ +E
Sbjct: 300 VNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEE 359

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           A+ +++ M + D+V      +N++I+G    GQ   A GVF +M      PN  T + +L
Sbjct: 360 ALGVYKMMKEKDRV-----VFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLL 414

Query: 508 PACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-D 565
             C +    +  +     +    S+  ++     ++D  A++G +  +  +  GM  K +
Sbjct: 415 CGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKAN 474

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSLAGMVDLGKKVF 624
           +I W SL+ G  LH     A  +  Q+    L+P N G ++ +   +S +   D  +K+ 
Sbjct: 475 VIVWGSLLGGCRLHRETQLAEHVLKQL--IELEPWNSGHYVLLSNIYSASRRWDEAEKIR 532

Query: 625 CSITE 629
            ++ E
Sbjct: 533 STVNE 537


>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
          Length = 742

 Score =  325 bits (833), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 212/682 (31%), Positives = 343/682 (50%), Gaps = 88/682 (12%)

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
           V N ++ +Y   G    ARR F+ +  KD V W ++I G  + G  DEA RL        
Sbjct: 142 VANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRL-------- 193

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
                                     +V+  E      +V +WT +I+G+++ GR + A+
Sbjct: 194 --------------------------LVQAPER-----NVVSWTSLIAGYSRAGRPADAV 222

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA--VKMGFTDDVLVGNSLIN 371
             F  M   GV P+ V +  A+SAC+ LK L +G  +H L    ++  TD+++V  +LI+
Sbjct: 223 YCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVV--ALID 280

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MY+KC ++  A+ VFD +                     G+  E                
Sbjct: 281 MYAKCGDIAQAQAVFDAVGR-------------------GQKPE---------------P 306

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           WN +I GY + G+ D A  LF +MG  D +     ++NS+I GY   G+  +AL +F +M
Sbjct: 307 WNAIIDGYCKLGHVDVARSLFDQMGARDVI-----TFNSMITGYIHSGRLRDALQLFMQM 361

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
           +      +  T++S+L ACA L A    + +H  + +R +E  + +  +L+D Y K G +
Sbjct: 362 RRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRV 421

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             +  +F  M  +D+ TW ++I G   +G    AL+ F QMK  G +P   T+++++ A 
Sbjct: 422 DEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTAC 481

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
           S + ++D G+  F  +   +++ P +EHY  MIDL  RSG L+EAM  ++ MP++P++ I
Sbjct: 482 SHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVI 541

Query: 672 WEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
           W ++L+ACR+H NIDLA  A E L  L P +  +   +  IY    +  DA +VR L  E
Sbjct: 542 WGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLMEE 601

Query: 732 NTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLC 786
              + + G   I V   V+ FV    S  ++  + + ++ +   +     +  +S   + 
Sbjct: 602 RGVKKTAGYSSITVAGQVHKFVANDQSHPWTLEIMAMMEEIACRLKSVGYSPVTSRIAVD 661

Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
           ++EEEKE+    HSEK+A+AF LI S      I IVKN+R+C  CH   K VS + + EI
Sbjct: 662 VDEEEKEQALLAHSEKIAIAFGLI-SLPPSLPIHIVKNLRVCEDCHSAIKLVSQLWNREI 720

Query: 847 FLADSKCLHHFKNGQCSCGDYW 868
            + D    HHF++G CSC D+W
Sbjct: 721 IVRDRSRFHHFRDGACSCNDFW 742



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/425 (26%), Positives = 190/425 (44%), Gaps = 49/425 (11%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D  V   ++    + G LD+AR +     ERN+ +W+++I  YSR  R  + V  F  M+
Sbjct: 170 DAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCML 229

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV---YVKCG 206
            DG+ PD+     ++ A   C   +   L   L + +G   +R   N V+A+   Y KCG
Sbjct: 230 SDGVAPDEV---AVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCG 286

Query: 207 KLIWARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            +  A+  F+++   +    WN++I GY ++G  D A  LFD+M   +    V+TFN +I
Sbjct: 287 DIAQAQAVFDAVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARD----VITFNSMI 342

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             Y   G+   A+++  +M   G+  D F                               
Sbjct: 343 TGYIHSGRLRDALQLFMQMRRHGMRADNF------------------------------- 371

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
               T+ S ++AC  L AL  G  +H+   +    +DV +G +L++MY KC  ++ A  V
Sbjct: 372 ----TVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVDEATAV 427

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
           F  + ++DV++W +MIAG    G    A E F +M+     P  +T+  +++    +   
Sbjct: 428 FHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLL 487

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           DE    F  M    K+      +  +I    + G  + A+ + + M      PN V   S
Sbjct: 488 DEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMP---MQPNAVIWGS 544

Query: 506 VLPAC 510
           +L AC
Sbjct: 545 ILSAC 549



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 152/324 (46%), Gaps = 18/324 (5%)

Query: 364 LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES 423
           LV N LI+MY+     + A R FD I  KD   W ++I G  + G   +A  L ++  E 
Sbjct: 141 LVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWGLLDEARRLLVQAPER 200

Query: 424 DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
               NV++W  LI+GY + G   +AV  F  M  +       A   +L A  +       
Sbjct: 201 ----NVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALSACSKLKNLDLG 256

Query: 484 ALGVFRKMQSSCFYPN--CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
            L      Q      +   V ++ +   C  +  +  V +  G       +   P  N++
Sbjct: 257 RLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVG-----RGQKPEP-WNAI 310

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
           ID Y K G++  +R++FD M ++D+IT+NS+I GY+  G    AL LF QM+  G++ + 
Sbjct: 311 IDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMRRHGMRADN 370

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY--SAMIDLYGRSGKLEEAMEF 659
            T +S++ A +  G +  G+ +  SI    Q I   + Y  +A++D+Y + G+++EA   
Sbjct: 371 FTVVSLLTACASLGALPHGRALHASIE---QRIVEEDVYLGTALLDMYMKCGRVDEATAV 427

Query: 660 IEDMPIEPDSSIWEALLTACRIHG 683
              M  E D   W A++     +G
Sbjct: 428 FHRMG-ERDVHTWTAMIAGLAFNG 450



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 167/382 (43%), Gaps = 31/382 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           +GRL +A+ +   +   G +    T ++LL AC    ++   R LHA +   + E DV++
Sbjct: 348 SGRLRDALQLFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYL 407

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T LL +Y KCG +D+A  VF  M ER+++TW+AMI   + +   ++ +E F  M +DG 
Sbjct: 408 GTALLDMYMKCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESFCQMKRDGF 467

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV------LAVYVKCGK 207
            P    +  +L AC +    + G+L  +      M  + ++   V      + +  + G 
Sbjct: 468 QPTSVTYIAVLTACSHSSLLDEGRLHFN-----EMRSLHKLHPQVEHYGCMIDLLARSGL 522

Query: 208 LIWARRFFESMD-EKDGVAWNSMISG---YFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           L  A    ++M  + + V W S++S    +  I     A     K+  EE  + V  +NI
Sbjct: 523 LDEAMHLVQTMPMQPNAVIWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNI 582

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR----TSQALDLFKEM 319
            I S        V M M +R           T    +  F  N +    T + + + +E+
Sbjct: 583 YIDSRQWADAKRVRMLMEERGVKKTAGYSSITVAGQVHKFVANDQSHPWTLEIMAMMEEI 642

Query: 320 S----FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           +     VG  P    +TS I+   D +     +  HS  + + F    L  +  I++   
Sbjct: 643 ACRLKSVGYSP----VTSRIAVDVDEEEKEQALLAHSEKIAIAFGLISLPPSLPIHIVKN 698

Query: 376 ---CEELEAAERVFDMIKDKDV 394
              CE+  +A ++   + ++++
Sbjct: 699 LRVCEDCHSAIKLVSQLWNREI 720



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 108/259 (41%), Gaps = 55/259 (21%)

Query: 522 IHGCVLRRSLESSLP-VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
           +H   LR  L S+ P V N LI  YA  G    +R  FD + +KD + W ++I G V  G
Sbjct: 126 LHAACLRTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWG 185

Query: 581 FWHAALDLFDQMKSFGLKPNRG--TFLSIILAHSLAGMVDLGKKVFC------------- 625
               A  L  Q       P R   ++ S+I  +S AG       V+C             
Sbjct: 186 LLDEARRLLVQ------APERNVVSWTSLIAGYSRAGRP--ADAVYCFNCMLSDGVAPDE 237

Query: 626 -----SITECYQI-----------------IPMIEHY-SAMIDLYGRSGKLEEAMEFIED 662
                +++ C ++                 I M ++   A+ID+Y + G + +A    + 
Sbjct: 238 VAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDA 297

Query: 663 MPIEPDSSIWEALLTA-CRIHGNIDLAVLAIERLFD-LEPGDVLIQRLILQIYAICGKPE 720
           +        W A++   C++ G++D+A      LFD +   DV+    ++  Y   G+  
Sbjct: 298 VGRGQKPEPWNAIIDGYCKL-GHVDVA----RSLFDQMGARDVITFNSMITGYIHSGRLR 352

Query: 721 DALKV-RKLERENTRRNSF 738
           DAL++  ++ R   R ++F
Sbjct: 353 DALQLFMQMRRHGMRADNF 371


>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  325 bits (833), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 216/736 (29%), Positives = 353/736 (47%), Gaps = 112/736 (15%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           +V D  F D   F K+L  C         +L+H+ +IK   S    ++N ++ VY KCG 
Sbjct: 10  VVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGF 69

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           L  AR+ F+ M +++  +WN+++    + G  DEA  LF  M   +              
Sbjct: 70  LEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERD-------------- 115

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
                QC                    +W  M+SGFAQ  R  +AL    +M     + N
Sbjct: 116 -----QC--------------------SWNAMVSGFAQRDRFEEALRFVVDMHSEDFVLN 150

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             +  SA+SAC  L  L++G++IH L  K  ++ DV +G++L++MYSKC  + +A+R FD
Sbjct: 151 EYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFD 210

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------------- 432
            +  +++ SWNS+I  Y Q G  GKA E+F++M    + P+ IT                
Sbjct: 211 DMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIRE 270

Query: 433 ---------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKV---------- 461
                                N L+  Y +    +EA  +F RM   D V          
Sbjct: 271 GLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYA 330

Query: 462 ----------------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
                           +RN  SWN+LIAGY Q G+   A+ +F  ++    +P   T  +
Sbjct: 331 KASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGN 390

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSL------ESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
           +L ACA L      ++ H  +L+         +S + V NSLID Y K G +   R +F+
Sbjct: 391 LLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFE 450

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
            M  +D ++WN++I GY  +G+   AL++F +M   G +P+  T + ++ A S AG+V+ 
Sbjct: 451 RMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEE 510

Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
           G+  F S+T  + ++P+ +HY+ M+DL GR+G L+EA   I+ MP+EPD+ +W +LL AC
Sbjct: 511 GRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAAC 570

Query: 680 RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFG 739
           ++HGNI L     ERL +++P +     L+  +YA  G+ +D ++VRK  R+       G
Sbjct: 571 KVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPG 630

Query: 740 QCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISG-- 797
             WI +++ ++ F+       +   +Y  L+ + E +  R  +     ++E  EE S   
Sbjct: 631 CSWISIQSHLHVFMVKDKRHPHKKDIYLILKILTEQMK-RVGYVPEADDDEPYEEESDSE 689

Query: 798 --IHSEKLALAFALIG 811
             +HSE      A +G
Sbjct: 690 LILHSEMETAVDAAVG 705



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 149/561 (26%), Positives = 242/561 (43%), Gaps = 118/561 (21%)

Query: 58  NTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           + +  LL  C+ S S+  AR +HA  +      ++F++ +L+ VY KCG L+DAR+VF+ 
Sbjct: 20  SPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDH 79

Query: 117 MRERNLYTWSAMIGAYS-----------------RDQ--------------RWREVVELF 145
           M++RN ++W+A++GA +                 RDQ              R+ E +   
Sbjct: 80  MQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFV 139

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M  +    +++ F   L AC    D   G  +H L+ K   S    + ++++ +Y KC
Sbjct: 140 VDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKC 199

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR-----EEIKLG--- 257
             +  A+R F+ MD ++ V+WNS+I+ Y Q G   +A  +F +M       +EI L    
Sbjct: 200 RVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVA 259

Query: 258 ----------------------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
                                       +V  N L+  Y +  + + A  +  RM     
Sbjct: 260 SACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMP---- 315

Query: 290 TPDVFTWTCMISGFA-------------------------------QNGRTSQALDLFKE 318
             DV + T M+SG+A                               QNG   +A+ LF  
Sbjct: 316 LRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLL 375

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF------TDDVLVGNSLINM 372
           +    + P   T  + ++AC +L  L +G + H+  +K GF        D+ VGNSLI+M
Sbjct: 376 LKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDM 435

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y KC  +E    VF+ + ++D  SWN+MI GY Q GY  +A E+F +M  S   P+ +T 
Sbjct: 436 YMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTM 495

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKND---KVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
             ++S     G  +E    FQ M        VK +      L+     L + NN +    
Sbjct: 496 IGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLI---- 551

Query: 490 KMQSSCFYPNCVTILSVLPAC 510
             Q+    P+ V   S+L AC
Sbjct: 552 --QTMPMEPDAVVWGSLLAAC 570



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 121/511 (23%), Positives = 223/511 (43%), Gaps = 81/511 (15%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKT 95
           R  EA+  +  + ++   +   ++ + L AC     + +  ++H  +      +DV++ +
Sbjct: 131 RFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGS 190

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            L+ +Y+KC  +  A+  F+DM  RN+ +W+++I  Y ++    + +E+F  M+  G+ P
Sbjct: 191 ALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEP 250

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIK---------LGMSCV------RRV------ 194
           D+     +  AC +      G  +H+ V+K         LG + V      RRV      
Sbjct: 251 DEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLV 310

Query: 195 -----------RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
                        S+++ Y K   +  AR  F +M E++ V+WN++I+GY Q GEN+EA 
Sbjct: 311 FDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAV 370

Query: 244 RLFDKMCREEI--------------------KLG---------------------VVTFN 262
           RLF  + RE I                    KLG                     +   N
Sbjct: 371 RLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGN 430

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            LI  Y + G  +    + +RM    +  D  +W  MI G+AQNG  ++AL++F+EM   
Sbjct: 431 SLIDMYMKCGLVEDGRLVFERM----LERDNVSWNAMIVGYAQNGYGTEALEIFREMLVS 486

Query: 323 GVMPNGVTITSAISACTDLKALAMGM-EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
           G  P+ VT+   +SAC+    +  G     S+ ++ G          ++++  +   L+ 
Sbjct: 487 GERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDE 546

Query: 382 AERVFD-MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
           A  +   M  + D   W S++A     G       +  ++ E D P N   + +L + Y 
Sbjct: 547 ANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEID-PLNSGPYVLLSNMYA 605

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
           + G   + V + ++M +   +K+   SW S+
Sbjct: 606 ELGRWKDVVRVRKQMRQMGVIKQPGCSWISI 636



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 157/344 (45%), Gaps = 43/344 (12%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL----------- 83
           NG   +A+ V   +   G +    T  ++  AC   ++I    ++HA +           
Sbjct: 230 NGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLV 289

Query: 84  --NLVTEI--------------------DVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
             N + ++                    DV  +T ++S YAK   +  AR +F +M ERN
Sbjct: 290 LGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERN 349

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
           + +W+A+I  Y+++    E V LF L+ ++ ++P  + F  +L AC N  D + G+  H+
Sbjct: 350 VVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHT 409

Query: 182 LVIKLGM------SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
            ++K G            V NS++ +Y+KCG +   R  FE M E+D V+WN+MI GY Q
Sbjct: 410 HILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQ 469

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVF 294
            G   EA  +F +M     +   VT   ++ + +  G  +      + M    G+ P   
Sbjct: 470 NGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKD 529

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
            +TCM+    + G   +A +L + M    + P+ V   S ++AC
Sbjct: 530 HYTCMVDLLGRAGCLDEANNLIQTMP---MEPDAVVWGSLLAAC 570



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 20/269 (7%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-------FLNLVT 87
           NG   EA+ +   +  +       T+ NLL AC +   + L R+ H        +     
Sbjct: 363 NGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGE 422

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + D+FV   L+ +Y KCG ++D R VFE M ER+  +W+AMI  Y+++    E +E+F  
Sbjct: 423 DSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFRE 482

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M+  G  PD      +L AC + G  E G+    S+ I+ G+  V+     ++ +  + G
Sbjct: 483 MLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAG 542

Query: 207 KLIWARRFFESMD-EKDGVAWNSMIS-----GYFQIGENDEAHRLFDKMCREEIKLGVVT 260
            L  A    ++M  E D V W S+++     G   +G+   A RL      E   L    
Sbjct: 543 CLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKY-VAERLL-----EIDPLNSGP 596

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGI 289
           + +L   Y +LG+    + + K+M  +G+
Sbjct: 597 YVLLSNMYAELGRWKDVVRVRKQMRQMGV 625



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 45/207 (21%)

Query: 486 GVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
           G+ RK+     + +      +L  C    +  + + +H  +++    S + + N L+D Y
Sbjct: 5   GLVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVY 64

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
            K G +  +R +FD M  ++  +WN+++      G    AL+LF  M      P R    
Sbjct: 65  GKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCM------PERDQ-- 116

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
                              CS             ++AM+  + +  + EEA+ F+ DM  
Sbjct: 117 -------------------CS-------------WNAMVSGFAQRDRFEEALRFVVDMHS 144

Query: 666 EP---DSSIWEALLTACRIHGNIDLAV 689
           E    +   + + L+AC   G +DL++
Sbjct: 145 EDFVLNEYSFGSALSACA--GLMDLSI 169


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  325 bits (832), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 219/680 (32%), Positives = 348/680 (51%), Gaps = 80/680 (11%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV- 322
           L+ +Y + G    A ++   M    +  DV +WT +IS ++ NG   +A   F  M ++ 
Sbjct: 93  LVDAYGKCGHAYYAAQVFDEMPEGSV--DVVSWTALISAYSSNGCVDEAFKAFGRMRWMR 150

Query: 323 ---GVMPNGVTITSA---ISACT---DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
              G    GV + S    +SAC        L  G  +H L VK GF     +GNS+++MY
Sbjct: 151 GWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMY 210

Query: 374 SKCEELEAAERVFD--MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM---QESDVPPN 428
           S C+++  A RVF+   I+ +DV SWNS+I+G+   G   +A   F  M     S V PN
Sbjct: 211 SACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPN 270

Query: 429 VITWNVLISG---------------YIQNGNEDEAV-----------DLFQRMGK----- 457
            +T   L+                 YI + +    V           D+  R G      
Sbjct: 271 RVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAR 330

Query: 458 --NDKVK-RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC------FYPNCVTILSVLP 508
              D V+ +N   W+++IAGY+Q      AL +FR+M            PN VT++SV+ 
Sbjct: 331 EIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIA 390

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM--SSKDI 566
           AC+ L AS     IH   +   L+    + ++LID  AK G+I + R +F  M  S++ +
Sbjct: 391 ACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTV 450

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
           ++W+S+I    +HG    AL+LF +M++ G +PN  T++S++ A S AG+V+ GK  F S
Sbjct: 451 VSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNS 510

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
           + + Y + P  +HY+ ++DL GR+G L+EA   I +MPI+ D ++W +LL AC +HGN  
Sbjct: 511 MEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCK 570

Query: 687 LAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
           L  +  +++  L+   V    L+  +Y   G+ +D +++R   R +  R   GQ +IE+ 
Sbjct: 571 LGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIG 630

Query: 747 NLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSH---SGLCIEEEEKEEISGI----- 798
           N VY+F+    S   S+++Y  L  + E V   + +   +GL +E+    +I+G+     
Sbjct: 631 NEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTETGLNVED---GDIAGLILRCK 687

Query: 799 -HSEKLALAFALI---------GSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFL 848
            HSE+LA+AF LI          S +    IRI KN+R+C  CH   K VS +   E+ +
Sbjct: 688 YHSERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIV 747

Query: 849 ADSKCLHHFKNGQCSCGDYW 868
            D+   HHF++G CSCGDYW
Sbjct: 748 RDAHRFHHFRDGFCSCGDYW 767



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 239/543 (44%), Gaps = 65/543 (11%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-LVTEIDVFVKTKLLS 99
           A+T    +          T+  LL+AC     +    ++HA+L  L    D F    L+ 
Sbjct: 36  ALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVD 95

Query: 100 VYAKCGCLDDAREVFEDMRER--NLYTWSAMIGAYSR----DQRWREVVELFFLMVQDG- 152
            Y KCG    A +VF++M E   ++ +W+A+I AYS     D+ ++    + ++   DG 
Sbjct: 96  AYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGS 155

Query: 153 --LFPDDFLFPKILQACG-NCGD--FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
                D      ++ AC   CG      G  +H LV+K G      + NS++ +Y  C  
Sbjct: 156 ECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKD 215

Query: 208 LIWARRFFESM--DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE---EIKLGVVTFN 262
           +  A R F  +  +++D V+WNS+ISG+   GE + A R F+ M  E    ++   VT  
Sbjct: 216 VGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVI 275

Query: 263 ILIRSYNQLGQCDVA--------------------------MEMVKRMESLGITPDVFT- 295
            L++S  +LG  + +                          ++M  R  +L +  ++F  
Sbjct: 276 ALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDG 335

Query: 296 --------WTCMISGFAQNGRTSQALDLFKEMSFVG------VMPNGVTITSAISACTDL 341
                   W+ MI+G+ Q     +AL LF++M   G      V PN VT+ S I+AC+ L
Sbjct: 336 VEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRL 395

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD--KDVYSWNS 399
            A      IH  AV  G   D  + ++LI+M +KC ++E   +VF  + +  + V SW+S
Sbjct: 396 GASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSS 455

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           MI      G   +A ELF +M+     PN IT+  ++S     G  ++    F  M K+ 
Sbjct: 456 MIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDY 515

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
            +      +  L+    + G  + A  V   M       +     S+L AC +L  + K+
Sbjct: 516 GMSPTGKHYACLVDLLGRAGHLDEAHNVILNMP---IKADLALWGSLLAAC-HLHGNCKL 571

Query: 520 KEI 522
            EI
Sbjct: 572 GEI 574



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 135/563 (23%), Positives = 238/563 (42%), Gaps = 107/563 (19%)

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           +  ++ + W+++I A +  Q  +  +  F  M    +  ++F FP +L+AC         
Sbjct: 13  ISHKDTFHWNSLI-AKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK--DGVAWNSMISGYF 234
             +H+ + +LG++  R    +++  Y KCG   +A + F+ M E   D V+W ++IS Y 
Sbjct: 72  LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131

Query: 235 QIGENDEAHRLFDKM-------CREEIKLGVVTFNILIRS-------------------- 267
             G  DEA + F +M         E   + VV+   L+ +                    
Sbjct: 132 SNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLV 191

Query: 268 -------YNQLGQCDVAMEMVKRMESLGITPDVF-----------TWTCMISGFAQNGRT 309
                     LG   V   M    + +G    VF           +W  +ISGF  NG  
Sbjct: 192 VKYGFGVSTHLGNSMV--HMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEA 249

Query: 310 SQALDLFKEMSFVG---VMPNGVTITSAISACTDLKALAMGMEIH----SLAVKMGFTDD 362
            +AL  F++M   G   V PN VT+ + + +C +L  +     +H    S    +    D
Sbjct: 250 ERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKD 309

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V+V  +L++M+++C  L  A  +FD ++ K+V  W++MIAGY Q     +A  LF +M  
Sbjct: 310 VVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLM 369

Query: 423 S------DVPPNVITWNVLISGYIQNGNEDEA----------------------VDLFQR 454
                  +V PN +T   +I+   + G    A                      +D+  +
Sbjct: 370 EGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAK 429

Query: 455 MG----------KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            G          + D+  R   SW+S+I      G+   AL +F +M++  + PN +T +
Sbjct: 430 CGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYI 489

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS------LIDTYAKSGNIVYSRTIF 558
           SVL AC++   +  V++   C    S+E    +  +      L+D   ++G++  +  + 
Sbjct: 490 SVLSACSH---AGLVEQGKSCF--NSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVI 544

Query: 559 DGMSSK-DIITWNSLICGYVLHG 580
             M  K D+  W SL+    LHG
Sbjct: 545 LNMPIKADLALWGSLLAACHLHG 567



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 139/302 (46%), Gaps = 17/302 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKV---RRNTYINLLQACIDSNSIHLARKLHAFLN-----LV 86
           NG    A+   + + ++G       R T I LL++C +   +  +  +H +++     L+
Sbjct: 246 NGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLL 305

Query: 87  TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
              DV V T LL ++A+CG L  ARE+F+ +  +N+  WSAMI  Y +     E + LF 
Sbjct: 306 VAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFR 365

Query: 147 LMVQDG------LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
            M+ +G      + P+      ++ AC   G   +  ++H   +  G+    R+ ++++ 
Sbjct: 366 QMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALID 425

Query: 201 VYVKCGKLIWARRFFESMDE--KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV 258
           +  KCG +   R+ F  MDE  +  V+W+SMI      GE   A  LF +M     +   
Sbjct: 426 MCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNE 485

Query: 259 VTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           +T+  ++ + +  G  +        ME   G++P    + C++    + G   +A ++  
Sbjct: 486 ITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVIL 545

Query: 318 EM 319
            M
Sbjct: 546 NM 547



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 126/310 (40%), Gaps = 56/310 (18%)

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
           ++T  WNSLIA          AL  F +MQ+     N  T  ++L ACA L       ++
Sbjct: 16  KDTFHWNSLIA-KNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQV 74

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM--SSKDIITWNSLICGYVLHG 580
           H  + R  L +      +L+D Y K G+  Y+  +FD M   S D+++W +LI  Y  +G
Sbjct: 75  HAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNG 134

Query: 581 FWHAALDLFDQMK-------------------------SFGLKPN---RGTFL-SIILAH 611
               A   F +M+                         + G   N   RG+ +  +++ +
Sbjct: 135 CVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKY 194

Query: 612 SLAGMVDLGKKVFCSITECYQI---------IPM----IEHYSAMIDLYGRSGKLEEAME 658
                  LG  +    + C  +         IP+    +  ++++I  +  +G+ E A+ 
Sbjct: 195 GFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERALR 254

Query: 659 FIEDM------PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD-----LEPGDVLIQR 707
             EDM       +EP+     ALL +C   G ++ +    E +       L   DV++  
Sbjct: 255 TFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLT 314

Query: 708 LILQIYAICG 717
            +L ++A CG
Sbjct: 315 ALLDMHARCG 324



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 7/138 (5%)

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           +S KD   WNSLI           AL  F +M++  +  N  TF +++ A +    +   
Sbjct: 13  ISHKDTFHWNSLIAKNATQNP-QTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71

Query: 621 KKVFCSITECYQIIPMIEHYSA--MIDLYGRSGKLEEAMEFIEDMPIEP-DSSIWEALLT 677
            +V   +T   ++    + +SA  ++D YG+ G    A +  ++MP    D   W AL++
Sbjct: 72  LQVHAYLT---RLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALIS 128

Query: 678 ACRIHGNIDLAVLAIERL 695
           A   +G +D A  A  R+
Sbjct: 129 AYSSNGCVDEAFKAFGRM 146


>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
 gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
 gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
          Length = 665

 Score =  325 bits (832), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 192/578 (33%), Positives = 317/578 (54%), Gaps = 46/578 (7%)

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  +ISG  ++GR   +   F +M     M   VT  S +SAC   K L +GM++H   +
Sbjct: 129 WNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVL 188

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           + G   D  V N+L++MY++C +++AA                               + 
Sbjct: 189 ESGVLPDQRVENALVDMYAECGDMDAA-------------------------------WV 217

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           LF  MQ      ++ +W  +ISG +++G  D A DLF  M +     R+T +W ++I GY
Sbjct: 218 LFEGMQMR----SMASWTSVISGLVRSGQVDRARDLFDHMPE-----RDTIAWTAMIDGY 268

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
            Q+G+  +AL  FR MQ      +  T++SV+ ACA L A    +     + R  ++  +
Sbjct: 269 VQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDV 328

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            V N+LID Y+K G+I  +  +F  M ++D  TW ++I G  ++G    A+D+F +M   
Sbjct: 329 FVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRA 388

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
              P+  TF+ ++ A + AG+VD G++ F S+TE Y I P + HY  +ID+ GR+GKL+E
Sbjct: 389 LQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKE 448

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A++ I+ MP++P+S+IW  LL +CR++GN ++  LA ERL +L+P +     L+  +YA 
Sbjct: 449 ALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYILLSNMYAK 508

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN 775
             + +D  ++R++  E   +   G   IE+  +++ FV    S   +  +YS L+NV  +
Sbjct: 509 SNRWKDVRRIRQIIMEKGIKKEPGCSMIEMNGIIHEFVAADRSHPMNKEIYSKLENVLTD 568

Query: 776 V-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
           +         +   + + EEEK+++   HSEKLA+ FAL+ +S++   IRIVKN+RMC+ 
Sbjct: 569 LRNAGYVPDVTEVLVEVTEEEKQKVLYWHSEKLAVTFALL-TSESNVIIRIVKNLRMCLD 627

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   K +S ++  E+ + D    HHF++G CSC DYW
Sbjct: 628 CHNAIKLISKLYGREVIVRDRTRFHHFRHGSCSCKDYW 665



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 167/386 (43%), Gaps = 42/386 (10%)

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           W+A+I  ++R  R+      F  MV+         +  +L ACG   D   G  +H  V+
Sbjct: 129 WNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVL 188

Query: 185 KLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHR 244
           + G+   +RV N+++ +Y +CG +  A   FE M  +   +W S+ISG  + G+ D A  
Sbjct: 189 ESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRARD 248

Query: 245 LFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFA 304
           LFD M                                          D   WT MI G+ 
Sbjct: 249 LFDHMPER---------------------------------------DTIAWTAMIDGYV 269

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           Q GR   AL+ F+ M    V  +  T+ S ++AC  L AL  G        ++G   DV 
Sbjct: 270 QVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVF 329

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
           VGN+LI+MYSKC  +E A  VF  + ++D ++W ++I G    G   +A ++F +M  + 
Sbjct: 330 VGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRAL 389

Query: 425 VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
             P+ +T+  +++     G  D+  + F  M +   +      +  LI    + G+   A
Sbjct: 390 QTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEA 449

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPAC 510
           L    KM      PN     ++L +C
Sbjct: 450 LDTIDKMP---MKPNSTIWGTLLASC 472



 Score = 41.6 bits (96), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 11/209 (5%)

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD----GMSSKDIITWNSLICGYV 577
           IH  V++  +ES+    +SLI  YA  G+   +R + +           + WN+LI G+ 
Sbjct: 78  IHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHN 137

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
             G +  +   F  M          T++S++ A      + LG +V   + E   ++P  
Sbjct: 138 RSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKRVLES-GVLPDQ 196

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
              +A++D+Y   G ++ A    E M +   +S W ++++     G +D A      LFD
Sbjct: 197 RVENALVDMYAECGDMDAAWVLFEGMQMRSMAS-WTSVISGLVRSGQVDRA----RDLFD 251

Query: 698 LEP-GDVLIQRLILQIYAICGKPEDALKV 725
             P  D +    ++  Y   G+  DAL+ 
Sbjct: 252 HMPERDTIAWTAMIDGYVQVGRFRDALET 280


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 185/619 (29%), Positives = 325/619 (52%), Gaps = 47/619 (7%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P VF W  +I G+++N     AL ++ +M    V P+  T    + AC  L  L MG  +
Sbjct: 82  PQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFV 141

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD--MIKDKDVYSWNSMIAGYCQAG 408
           H+   ++GF  DV V N LI +Y+KC  L  A  VF+   + ++ + SW ++++ Y Q G
Sbjct: 142 HAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNG 201

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGY--IQNGNEDEAVD---------------- 450
              +A E+F +M++ DV P+ +    +++ +  +Q+  +  ++                 
Sbjct: 202 EPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLI 261

Query: 451 ----LFQRMGKN-------DKVKR-NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
               ++ + G+        DK+K  N   WN++I+GY + G   +A+ +F +M +    P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRP 321

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           + ++I S + ACA + +  + + +   V R      + + ++LID +AK G++  +R++F
Sbjct: 322 DTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVF 381

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           D    +D++ W+++I GY LHG    A+ L+  M+  G+ PN  TFL +++A + +GMV 
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVR 441

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            G   F  + + ++I P  +HY+ +IDL GR+G L++A E I+ MP++P  ++W ALL+A
Sbjct: 442 EGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
           C+ H +++L   A ++LF ++P +      +  +YA     +   +VR   +E       
Sbjct: 501 CKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560

Query: 739 GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEE 789
           G  W+EV+  +  F  G  S       Y  ++   E + +R    G           + +
Sbjct: 561 GCSWVEVRGRLEGFRVGDKSHPR----YEEIERQVEWIESRLKEGGFVANKDASLHDLND 616

Query: 790 EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
           EE EE    HSE++ +A+ LI + Q   T+RI KN+R CV+CH   K +S +   EI + 
Sbjct: 617 EEAEETLCSHSERITIAYGLISTPQGT-TLRITKNLRACVNCHAATKLISKLVGREIVVR 675

Query: 850 DSKCLHHFKNGQCSCGDYW 868
           D+   HHFK+G CSCGDYW
Sbjct: 676 DTNRFHHFKDGVCSCGDYW 694



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 147/483 (30%), Positives = 238/483 (49%), Gaps = 49/483 (10%)

Query: 68  IDSNSIHLA--RKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYT 124
           IDS S H A  R++HA  L L  +   F+ TKL+   +  G +  AR+VF+D+    ++ 
Sbjct: 28  IDS-STHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFP 86

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           W+A+I  YSR+  +++ + ++  M    + PD F FP +L+ACG     + G+ +H+ V 
Sbjct: 87  WNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVF 146

Query: 185 KLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD--EKDGVAWNSMISGYFQIGENDEA 242
           +LG      V+N ++A+Y KC +L  AR  FE +   E+  V+W +++S Y Q GE  EA
Sbjct: 147 RLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEA 206

Query: 243 HRLFDKMCREEIK-------------------------------LGVVTFNILIRSYNQL 271
             +F +M + ++K                               +G+ T   L+ S N +
Sbjct: 207 LEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTM 266

Query: 272 ----GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
               GQ   A  +  +M+S    P++  W  MISG+A+NG    A+DLF EM    V P+
Sbjct: 267 YAKCGQVATAKILFDKMKS----PNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPD 322

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            ++ITSAISAC  + +L     +     +  + DDV + ++LI+M++KC  +E A  VFD
Sbjct: 323 TISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFD 382

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
              D+DV  W++MI GY   G   +A  L+  M+   V PN +T+  L+     +G   E
Sbjct: 383 RTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVRE 442

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
               F RM  + K+      +  +I    + G  + A  V + M      P      ++L
Sbjct: 443 GWWFFNRMA-DHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMP---VQPGVTVWGALL 498

Query: 508 PAC 510
            AC
Sbjct: 499 SAC 501



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 186/414 (44%), Gaps = 68/414 (16%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE-- 115
           T+ +LL+AC   + + + R +HA    L  E DVFV+  L+++YAKC  L  AR VFE  
Sbjct: 121 TFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGL 180

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            + ER + +W+A++ AY+++    E +E+F  M +  + PD      +L A     D E 
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQ 240

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G+ +H+ V+K+G+     +  S+  +Y KCG++  A+  F+ M   + + WN+MISGY +
Sbjct: 241 GRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA------------------ 277
            G   +A  LF +M  ++++   ++    I +  Q+G  + A                  
Sbjct: 301 NGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFI 360

Query: 278 -------------MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
                        +E  + +    +  DV  W+ MI G+  +G+  +A+ L++ M   GV
Sbjct: 361 SSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGV 420

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            PN VT    + AC            HS  V+ G+           N            R
Sbjct: 421 HPNDVTFLGLLIACN-----------HSGMVREGWW--------FFN------------R 449

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           + D   +     +  +I    +AG+  +AYE+   M    V P V  W  L+S 
Sbjct: 450 MADHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCMP---VQPGVTVWGALLSA 500



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 147/318 (46%), Gaps = 38/318 (11%)

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           F R   +D  +     WN++I GY +     +AL ++ KMQ +   P+  T   +L AC 
Sbjct: 71  FARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACG 130

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG--MSSKDIITW 569
            L      + +H  V R   E+ + V N LI  YAK   +  +RT+F+G  +  + I++W
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSW 190

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI-- 627
            +++  Y  +G    AL++F QM+   +KP+    +S++ A +    ++ G+ +  S+  
Sbjct: 191 TAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMK 250

Query: 628 -----------------TECYQII-----------PMIEHYSAMIDLYGRSGKLEEAMEF 659
                             +C Q+            P +  ++AMI  Y ++G  ++A++ 
Sbjct: 251 MGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDL 310

Query: 660 IEDM---PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE-PGDVLIQRLILQIYAI 715
             +M    + PD+    + ++AC   G+++ A    E +   +   DV I   ++ ++A 
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAK 370

Query: 716 CGKPEDALKV--RKLERE 731
           CG  E A  V  R L+R+
Sbjct: 371 CGSVECARSVFDRTLDRD 388



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 94/188 (50%), Gaps = 8/188 (4%)

Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
           ++++IH  +L   L+ S  ++  LI   +  G+I ++R +FD +    +  WN++I GY 
Sbjct: 36  QLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYS 95

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPM 636
            +  +  AL ++ +M+   + P+  TF  ++ A      + +G+ V   +    ++    
Sbjct: 96  RNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVF 155

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI--WEALLTACRIHGNI--DLAVLAI 692
           ++  + +I LY +  +L  A    E +P+ P+ +I  W A+++A   +G     L + + 
Sbjct: 156 VQ--NGLIALYAKCRRLGCARTVFEGLPL-PERTIVSWTAIVSAYAQNGEPVEALEIFSQ 212

Query: 693 ERLFDLEP 700
            R  D++P
Sbjct: 213 MRKMDVKP 220


>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 194/580 (33%), Positives = 308/580 (53%), Gaps = 43/580 (7%)

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V+P+  + +  + +C       +G   H   +KMGF  D+++   L++ Y+K  +L+ A+
Sbjct: 6   VLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAK 65

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES-------------------- 423
           RVF  +  +DV + N+MI+   + GY  +A  LF  M E                     
Sbjct: 66  RVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKLGDINS 125

Query: 424 -----DVPP--NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
                D  P  +V++WN +I GY ++     A +LF  MG      RN+ +WN++I+ Y 
Sbjct: 126 ARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGS----ARNSVTWNTMISAYV 181

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           Q G+   A+ +F++MQS    P  VT++S+L ACA+L A +  + IHG +  + L+  + 
Sbjct: 182 QCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVV 241

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           + N+LID Y K G +  +  +F G+S K+I  WNS+I G  ++G    A+  F  M+  G
Sbjct: 242 LGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEG 301

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           +KP+  TF+ I+   S +G++  G++ F  +   Y + P +EHY  M+DL GR+G L+EA
Sbjct: 302 IKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEA 361

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
           +E I  MP++P+S +  +LL AC+IH +  L     ++L +L+P D      +  +YA  
Sbjct: 362 LELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCDGGNYVFLSNLYASL 421

Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV 776
            + +D    RKL  +     + G   IEV N+V+ FV G  S      + ++L  + + +
Sbjct: 422 SRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAGDTSHPQFTQINAFLDEIAKEL 481

Query: 777 --------TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMC 828
                   TA   H    IEEEEKE     HSE++A+AF L+ S+    TIR+VKN+R C
Sbjct: 482 KGQGHVPNTANVLHD---IEEEEKEGAIRYHSERIAVAFGLM-STPPGKTIRVVKNLRTC 537

Query: 829 VHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             CH   K +S     EI + D K  HHF+NG CSC DYW
Sbjct: 538 SDCHSAMKLISNAFKREIIVRDRKRFHHFRNGSCSCNDYW 577



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 179/390 (45%), Gaps = 33/390 (8%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M+++ + P    F  IL++C   G+ + G+  H  ++K+G      ++  +L  Y K G 
Sbjct: 1   MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-----------IKL 256
           L  A+R F  M  +D VA N+MIS   + G  +EA  LFD M                KL
Sbjct: 61  LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYCKL 120

Query: 257 G----------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
           G                VV++N +I  Y +  Q   A E+   M   G   +  TW  MI
Sbjct: 121 GDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLM---GSARNSVTWNTMI 177

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           S + Q G    A+ +F++M    V P  VT+ S +SAC  L AL MG  IH         
Sbjct: 178 SAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLK 237

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            DV++GN+LI+MY KC  LEAA  VF  +  K+++ WNS+I G    G   +A   FI M
Sbjct: 238 IDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVM 297

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
           ++  + P+ +T+  ++SG   +G        F  M     ++     +  ++    + G 
Sbjct: 298 EKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGY 357

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
              AL + R M      PN + + S+L AC
Sbjct: 358 LKEALELIRAMP---MKPNSMVLGSLLRAC 384



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 139/331 (41%), Gaps = 45/331 (13%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           + ++  +L++C  S    L    H   + +  E D+ ++T LL  YAK G L  A+ VF 
Sbjct: 10  KTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGDLKCAKRVFM 69

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            M  R++   +AMI A S+     E   LF  M +     +   +  ++      GD  +
Sbjct: 70  GMPRRDVVANNAMISALSKHGYVEEARNLFDNMTER----NSCSWNSMITCYCKLGDINS 125

Query: 176 GKLMHSLVIKLGMSCVRRVR--NSVLAVYVKCGKLIWARRFFESM-DEKDGVAWNSMISG 232
            +LM         + V+ V   N+++  Y K  +L+ A+  F  M   ++ V WN+MIS 
Sbjct: 126 ARLM------FDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISA 179

Query: 233 YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA--------------- 277
           Y Q GE   A  +F +M  E +K   VT   L+ +   LG  D+                
Sbjct: 180 YVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKID 239

Query: 278 -------MEMVKRMESLGITPDV---------FTWTCMISGFAQNGRTSQALDLFKEMSF 321
                  ++M  +  +L    DV         F W  +I G   NGR  +A+  F  M  
Sbjct: 240 VVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEK 299

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHS 352
            G+ P+GVT    +S C+    L+ G    S
Sbjct: 300 EGIKPDGVTFVGILSGCSHSGLLSAGQRYFS 330



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 5/263 (1%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDM-RERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
           DV     ++  Y K   L  A+E+F  M   RN  TW+ MI AY +   +   + +F  M
Sbjct: 137 DVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQM 196

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
             + + P +     +L AC + G  + G+ +H  +    +     + N+++ +Y KCG L
Sbjct: 197 QSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGAL 256

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             A   F  +  K+   WNS+I G    G  +EA   F  M +E IK   VTF  ++   
Sbjct: 257 EAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGC 316

Query: 269 NQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           +  G           M  + G+ P V  + CM+    + G   +AL+L + M    + PN
Sbjct: 317 SHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMP---MKPN 373

Query: 328 GVTITSAISACTDLKALAMGMEI 350
            + + S + AC   K   +G ++
Sbjct: 374 SMVLGSLLRACQIHKDTKLGEQV 396



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 1/173 (0%)

Query: 6   LTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQ 65
           L   Q+L  L+    N    +T +      G    AI++   + ++  K    T ++LL 
Sbjct: 154 LVAAQELFLLMGSARNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLS 213

Query: 66  ACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYT 124
           AC    ++ +   +H ++     +IDV +   L+ +Y KCG L+ A +VF  +  +N++ 
Sbjct: 214 ACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFC 273

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
           W+++I     + R  E +  F +M ++G+ PD   F  IL  C + G   AG+
Sbjct: 274 WNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQ 326


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 198/632 (31%), Positives = 322/632 (50%), Gaps = 60/632 (9%)

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG---VTITSAISACTDLKALAMGMEIH 351
           +W   I   A  G+   A+ LF +M    V P      ++ +A+ +C  L    +   +H
Sbjct: 14  SWAYQIRMAASQGQFLHAISLFLQMR-ASVAPRSSVPASLPAALKSCAGLGLCTLAASLH 72

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEEL--------------------EAAERVFDMIKD 391
           +LA++ G   D    N+L+N+  K                        E+  +VFD + +
Sbjct: 73  ALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLE 132

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN---------------VLI 436
           +D  SWN++I G  +     +A  +  +M      P+  T +               +++
Sbjct: 133 RDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV 192

Query: 437 SGY-IQNGNEDEA------VDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQK 481
            GY I+NG +++       +D++    + D   +        +   WNS++AGY Q G  
Sbjct: 193 HGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSV 252

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
             ALG+FR+M  +   P  VT  S++PA   L      K++H  ++R     ++ + +SL
Sbjct: 253 EEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSL 312

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
           ID Y K GN+  +R +F+G+ S DI++W ++I GY LHG    A  LF++M+   +KPN 
Sbjct: 313 IDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNH 372

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
            TFL+++ A S AG+VD G K F S++  Y  +P +EH +A+ D  GR+G L+EA  FI 
Sbjct: 373 ITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFIS 432

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPED 721
           +M I+P SS+W  LL ACR+H N  LA    +++F+LEP  +    ++  +Y+  G+  +
Sbjct: 433 EMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWNE 492

Query: 722 ALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSS 781
           A ++RK  R    +      WIEVKN ++ F+    S  + D +   L    E +  +  
Sbjct: 493 AAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQGY 552

Query: 782 HSGL-----CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAK 836
              +      IEEE+K E+   HSEKLA+ F +I S+    TIR++KN+R+CV CH   K
Sbjct: 553 VPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGII-STPPGTTIRVMKNLRVCVDCHIATK 611

Query: 837 YVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           ++S +   EI + D    H FK+G CSCGD+W
Sbjct: 612 FISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 174/390 (44%), Gaps = 63/390 (16%)

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL---FPKILQACGNCGDFEAGKLMH 180
           +W+  I   +   ++   + LF L ++  + P   +    P  L++C   G       +H
Sbjct: 14  SWAYQIRMAASQGQFLHAISLF-LQMRASVAPRSSVPASLPAALKSCAGLGLCTLAASLH 72

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKC---------------GKLIWA-----RRFFESMDE 220
           +L I+ G    R   N++L + +K                G L  A     R+ F+ M E
Sbjct: 73  ALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLE 132

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKMCRE--------------------EIKLGVVT 260
           +D V+WN++I G  +   + EA  +  +M R+                    +IK G+V 
Sbjct: 133 RDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVV 192

Query: 261 FNILIRS---------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ 305
               I++               Y    Q D +M++           D   W  M++G+AQ
Sbjct: 193 HGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDC----DAVLWNSMLAGYAQ 248

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
           NG   +AL +F+ M   GV P  VT +S I A  +L  L +G ++H+  ++  F D++ +
Sbjct: 249 NGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFI 308

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
            +SLI+MY KC  ++ A RVF+ I+  D+ SW +MI GY   G   +A+ LF +M+  +V
Sbjct: 309 SSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNV 368

Query: 426 PPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
            PN IT+  +++     G  D     F  M
Sbjct: 369 KPNHITFLAVLTACSHAGLVDNGWKYFNSM 398



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 184/398 (46%), Gaps = 42/398 (10%)

Query: 108 DDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC 167
           +  R+VF++M ER+  +W+ +I   +  +R +E + +   M +DG  PD F    +L   
Sbjct: 121 ESMRKVFDEMLERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIF 180

Query: 168 GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
             C D + G ++H   IK G      V +S++ +Y  C ++ ++ + F+S  + D V WN
Sbjct: 181 AECADIKRGMVVHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWN 240

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL---------------- 271
           SM++GY Q G  +EA  +F +M +  ++   VTF+ LI ++  L                
Sbjct: 241 SMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRA 300

Query: 272 -------------------GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
                              G  D+A  +   ++S    PD+ +WT MI G+A +G T++A
Sbjct: 301 RFNDNIFISSSLIDMYCKCGNVDIARRVFNGIQS----PDIVSWTAMIMGYALHGPTTEA 356

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFTDDVLVGNSLIN 371
             LF+ M    V PN +T  + ++AC+    +  G +  +S++ + GF   +    +L +
Sbjct: 357 FVLFERMELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALAD 416

Query: 372 MYSKCEELEAAERVFDMIKDKDVYS-WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
              +  +L+ A      +K K   S W++++           A E+  K+ E + P ++ 
Sbjct: 417 TLGRAGDLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELE-PKSMG 475

Query: 431 TWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           +  +L + Y  +G  +EA  L + M      K    SW
Sbjct: 476 SHVILSNMYSASGRWNEAAQLRKSMRIKGMKKEPACSW 513



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 147/317 (46%), Gaps = 16/317 (5%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DVFV + L+ +YA C  +D + +VF+   + +   W++M+  Y+++    E + +F  M+
Sbjct: 204 DVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGSVEEALGIFRRML 263

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           Q G+ P    F  ++ A GN      GK +H+ +I+   +    + +S++ +Y KCG + 
Sbjct: 264 QAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSSLIDMYCKCGNVD 323

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            ARR F  +   D V+W +MI GY   G   EA  LF++M    +K   +TF  ++ + +
Sbjct: 324 IARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACS 383

Query: 270 QLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
             G  D   +    M +  G  P +     +     + G   +A +   EM    + P  
Sbjct: 384 HAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEMK---IKPTS 440

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYS------KCEELE 380
              ++ + AC   K   +  E+   A K+   +   +G+ +I  NMYS      +  +L 
Sbjct: 441 SVWSTLLRACRVHKNTVLAEEV---AKKIFELEPKSMGSHVILSNMYSASGRWNEAAQLR 497

Query: 381 AAERVFDMIKDKDVYSW 397
            + R+  M K +   SW
Sbjct: 498 KSMRIKGM-KKEPACSW 513



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 127/297 (42%), Gaps = 47/297 (15%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFV 93
           NG + EA+ +   +   G +    T+ +L+ A  + + + L ++LHA+L      D +F+
Sbjct: 249 NGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFI 308

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +Y KCG +D AR VF  ++  ++ +W+AMI  Y+      E   LF  M    +
Sbjct: 309 SSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNV 368

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+   F  +L AC + G  + G                                 W  +
Sbjct: 369 KPNHITFLAVLTACSHAGLVDNG---------------------------------W--K 393

Query: 214 FFESMDEKDGVAWN-----SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
           +F SM  + G   +     ++     + G+ DEA+    +M   +IK     ++ L+R+ 
Sbjct: 394 YFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFISEM---KIKPTSSVWSTLLRAC 450

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG-FAQNGRTSQALDLFKEMSFVGV 324
                  +A E+ K++  L   P       ++S  ++ +GR ++A  L K M   G+
Sbjct: 451 RVHKNTVLAEEVAKKIFEL--EPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGM 505


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  324 bits (831), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 219/680 (32%), Positives = 348/680 (51%), Gaps = 80/680 (11%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV- 322
           L+ +Y + G    A ++   M    +  DV +WT +IS ++ NG   +A   F  M ++ 
Sbjct: 93  LVDAYGKCGHAYYAAQVFDEMPEGSV--DVVSWTALISAYSSNGCVDEAFXAFGRMRWMR 150

Query: 323 ---GVMPNGVTITSA---ISACT---DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
              G    GV + S    +SAC        L  G  +H L VK GF     +GNS+++MY
Sbjct: 151 GWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMY 210

Query: 374 SKCEELEAAERVFD--MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM---QESDVPPN 428
           S C+++  A RVF+   I+ +DV SWNS+I+G+   G   +A   F  M     S V PN
Sbjct: 211 SACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPN 270

Query: 429 VITWNVLISG---------------YIQNGNEDEAV-----------DLFQRMGK----- 457
            +T   L+                 YI + +    V           D+  R G      
Sbjct: 271 RVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAR 330

Query: 458 --NDKVK-RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC------FYPNCVTILSVLP 508
              D V+ +N   W+++IAGY+Q      AL +FR+M            PN VT++SV+ 
Sbjct: 331 EIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIA 390

Query: 509 ACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM--SSKDI 566
           AC+ L AS     IH   +   L+    + ++LID  AK G+I + R +F  M  S++ +
Sbjct: 391 ACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTV 450

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
           ++W+S+I    +HG    AL+LF +M++ G +PN  T++S++ A S AG+V+ GK  F S
Sbjct: 451 VSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNS 510

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
           + + Y + P  +HY+ ++DL GR+G L+EA   I +MPI+ D ++W +LL AC +HGN  
Sbjct: 511 MEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCK 570

Query: 687 LAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
           L  +  +++  L+   V    L+  +Y   G+ +D +++R   R +  R   GQ +IE+ 
Sbjct: 571 LGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFIEIG 630

Query: 747 NLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSH---SGLCIEEEEKEEISGI----- 798
           N VY+F+    S   S+++Y  L  + E V   + +   +GL +E+    +I+G+     
Sbjct: 631 NEVYSFMAEDRSHPESEMIYKELDGLDERVRKAAKYVTETGLNVED---GDIAGLIXRCK 687

Query: 799 -HSEKLALAFALI---------GSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFL 848
            HSE+LA+AF LI          S +    IRI KN+R+C  CH   K VS +   E+ +
Sbjct: 688 YHSERLAIAFGLIMIDRHSTCSCSLRTATPIRITKNLRVCRDCHAYTKLVSKVIDRELIV 747

Query: 849 ADSKCLHHFKNGQCSCGDYW 868
            D+   HHF++G CSCGDYW
Sbjct: 748 RDAHRFHHFRDGFCSCGDYW 767



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 145/543 (26%), Positives = 238/543 (43%), Gaps = 65/543 (11%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-LVTEIDVFVKTKLLS 99
           A+T    +          T+  LL+AC     +    ++HA+L  L    D F    L+ 
Sbjct: 36  ALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVD 95

Query: 100 VYAKCGCLDDAREVFEDMRER--NLYTWSAMIGAYSR----DQRWREVVELFFLMVQDG- 152
            Y KCG    A +VF++M E   ++ +W+A+I AYS     D+ +     + ++   DG 
Sbjct: 96  AYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGS 155

Query: 153 --LFPDDFLFPKILQACG-NCGD--FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
                D      ++ AC   CG      G  +H LV+K G      + NS++ +Y  C  
Sbjct: 156 ECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKD 215

Query: 208 LIWARRFFESM--DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE---EIKLGVVTFN 262
           +  A R F  +  +++D V+WNS+ISG+   GE + A R F+ M  E    ++   VT  
Sbjct: 216 VGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVI 275

Query: 263 ILIRSYNQLGQCDVA--------------------------MEMVKRMESLGITPDVFT- 295
            L++S  +LG  + +                          ++M  R  +L +  ++F  
Sbjct: 276 ALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDG 335

Query: 296 --------WTCMISGFAQNGRTSQALDLFKEMSFVG------VMPNGVTITSAISACTDL 341
                   W+ MI+G+ Q     +AL LF++M   G      V PN VT+ S I+AC+ L
Sbjct: 336 VEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRL 395

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD--KDVYSWNS 399
            A      IH  AV  G   D  + ++LI+M +KC ++E   +VF  + +  + V SW+S
Sbjct: 396 GASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSS 455

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           MI      G   +A ELF +M+     PN IT+  ++S     G  ++    F  M K+ 
Sbjct: 456 MIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDY 515

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
            +      +  L+    + G  + A  V   M       +     S+L AC +L  + K+
Sbjct: 516 GMSPTGKHYACLVDLLGRAGHLDEAHNVILNMP---IKADLALWGSLLAAC-HLHGNCKL 571

Query: 520 KEI 522
            EI
Sbjct: 572 GEI 574



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 135/563 (23%), Positives = 237/563 (42%), Gaps = 107/563 (19%)

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           +  ++ + W+++I A +  Q  +  +  F  M    +  ++F FP +L+AC         
Sbjct: 13  ISHKDTFHWNSLI-AKNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK--DGVAWNSMISGYF 234
             +H+ + +LG++  R    +++  Y KCG   +A + F+ M E   D V+W ++IS Y 
Sbjct: 72  LQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYS 131

Query: 235 QIGENDEAHRLFDKM-------CREEIKLGVVTFNILIRS-------------------- 267
             G  DEA   F +M         E   + VV+   L+ +                    
Sbjct: 132 SNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLV 191

Query: 268 -------YNQLGQCDVAMEMVKRMESLGITPDVF-----------TWTCMISGFAQNGRT 309
                     LG   V   M    + +G    VF           +W  +ISGF  NG  
Sbjct: 192 VKYGFGVSTHLGNSMV--HMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEA 249

Query: 310 SQALDLFKEMSFVG---VMPNGVTITSAISACTDLKALAMGMEIH----SLAVKMGFTDD 362
            +AL  F++M   G   V PN VT+ + + +C +L  +     +H    S    +    D
Sbjct: 250 ERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKD 309

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V+V  +L++M+++C  L  A  +FD ++ K+V  W++MIAGY Q     +A  LF +M  
Sbjct: 310 VVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLM 369

Query: 423 S------DVPPNVITWNVLISGYIQNGNEDEA----------------------VDLFQR 454
                  +V PN +T   +I+   + G    A                      +D+  +
Sbjct: 370 EGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAK 429

Query: 455 MG----------KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            G          + D+  R   SW+S+I      G+   AL +F +M++  + PN +T +
Sbjct: 430 CGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYI 489

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS------LIDTYAKSGNIVYSRTIF 558
           SVL AC++   +  V++   C    S+E    +  +      L+D   ++G++  +  + 
Sbjct: 490 SVLSACSH---AGLVEQGKSCF--NSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVI 544

Query: 559 DGMSSK-DIITWNSLICGYVLHG 580
             M  K D+  W SL+    LHG
Sbjct: 545 LNMPIKADLALWGSLLAACHLHG 567



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 139/302 (46%), Gaps = 17/302 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKV---RRNTYINLLQACIDSNSIHLARKLHAFLN-----LV 86
           NG    A+   + + ++G       R T I LL++C +   +  +  +H +++     L+
Sbjct: 246 NGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLL 305

Query: 87  TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
              DV V T LL ++A+CG L  ARE+F+ +  +N+  WSAMI  Y +     E + LF 
Sbjct: 306 VAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFR 365

Query: 147 LMVQDG------LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
            M+ +G      + P+      ++ AC   G   +  ++H   +  G+    R+ ++++ 
Sbjct: 366 QMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALID 425

Query: 201 VYVKCGKLIWARRFFESMDE--KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV 258
           +  KCG +   R+ F  MDE  +  V+W+SMI      GE   A  LF +M     +   
Sbjct: 426 MCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNE 485

Query: 259 VTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           +T+  ++ + +  G  +        ME   G++P    + C++    + G   +A ++  
Sbjct: 486 ITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVIL 545

Query: 318 EM 319
            M
Sbjct: 546 NM 547



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 126/310 (40%), Gaps = 56/310 (18%)

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
           ++T  WNSLIA          AL  F +MQ+     N  T  ++L ACA L       ++
Sbjct: 16  KDTFHWNSLIA-KNATQNPQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQV 74

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM--SSKDIITWNSLICGYVLHG 580
           H  + R  L +      +L+D Y K G+  Y+  +FD M   S D+++W +LI  Y  +G
Sbjct: 75  HAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNG 134

Query: 581 FWHAALDLFDQMK-------------------------SFGLKPN---RGTFL-SIILAH 611
               A   F +M+                         + G   N   RG+ +  +++ +
Sbjct: 135 CVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVVKY 194

Query: 612 SLAGMVDLGKKVFCSITECYQI---------IPM----IEHYSAMIDLYGRSGKLEEAME 658
                  LG  +    + C  +         IP+    +  ++++I  +  +G+ E A+ 
Sbjct: 195 GFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERALR 254

Query: 659 FIEDM------PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD-----LEPGDVLIQR 707
             EDM       +EP+     ALL +C   G ++ +    E +       L   DV++  
Sbjct: 255 TFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVLT 314

Query: 708 LILQIYAICG 717
            +L ++A CG
Sbjct: 315 ALLDMHARCG 324



 Score = 42.7 bits (99), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 7/138 (5%)

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           +S KD   WNSLI           AL  F +M++  +  N  TF +++ A +    +   
Sbjct: 13  ISHKDTFHWNSLIAKNATQNP-QTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPT 71

Query: 621 KKVFCSITECYQIIPMIEHYSA--MIDLYGRSGKLEEAMEFIEDMPIEP-DSSIWEALLT 677
            +V   +T   ++    + +SA  ++D YG+ G    A +  ++MP    D   W AL++
Sbjct: 72  LQVHAYLT---RLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALIS 128

Query: 678 ACRIHGNIDLAVLAIERL 695
           A   +G +D A  A  R+
Sbjct: 129 AYSSNGCVDEAFXAFGRM 146


>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g08820
 gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
 gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
 gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 685

 Score =  324 bits (830), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 190/613 (30%), Positives = 314/613 (51%), Gaps = 36/613 (5%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++F +  +I+GF  N    + LDLF  +   G+  +G T    + ACT   +  +G+++
Sbjct: 74  PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           HSL VK GF  DV    SL+++YS    L  A ++FD I D+ V +W ++ +GY  +G  
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRH 193

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA---------------------- 448
            +A +LF KM E  V P+      ++S  +  G+ D                        
Sbjct: 194 REAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTL 253

Query: 449 VDLFQRMGKNDK--------VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           V+L+ + GK +K        V+++  +W+++I GY         + +F +M      P+ 
Sbjct: 254 VNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQ 313

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
            +I+  L +CA L A +  +     + R    ++L + N+LID YAK G +     +F  
Sbjct: 314 FSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKE 373

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           M  KDI+  N+ I G   +G    +  +F Q +  G+ P+  TFL ++     AG++  G
Sbjct: 374 MKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG 433

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
            + F +I+  Y +   +EHY  M+DL+GR+G L++A   I DMP+ P++ +W ALL+ CR
Sbjct: 434 LRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCR 493

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           +  +  LA   ++ L  LEP +      +  IY++ G+ ++A +VR +  +   +   G 
Sbjct: 494 LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGY 553

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEI 795
            WIE++  V+ F+    S   SD +Y+ L+++   +        +      +EEEEKE +
Sbjct: 554 SWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERV 613

Query: 796 SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
            G HSEKLA+A  LI S+     IR+VKN+R+C  CHE  K +S +   EI + D+   H
Sbjct: 614 LGYHSEKLAVALGLI-STDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFH 672

Query: 856 HFKNGQCSCGDYW 868
            F NG CSC DYW
Sbjct: 673 CFTNGSCSCNDYW 685



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 211/434 (48%), Gaps = 25/434 (5%)

Query: 17  TKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA 76
           T+  N    ++ ++    N   +E + +  SI   G  +   T+  +L+AC  ++S  L 
Sbjct: 71  TQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLG 130

Query: 77  RKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
             LH+ +       DV   T LLS+Y+  G L+DA ++F+++ +R++ TW+A+   Y+  
Sbjct: 131 IDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTS 190

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
            R RE ++LF  MV+ G+ PD +   ++L AC + GD ++G+ +   + ++ M     VR
Sbjct: 191 GRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR 250

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
            +++ +Y KCGK+  AR  F+SM EKD V W++MI GY       E   LF +M +E +K
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLK 310

Query: 256 LGVVTFNILIRSYNQLGQCDV---AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
               +    + S   LG  D+    + ++ R E L    ++F    +I  +A+ G  ++ 
Sbjct: 311 PDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL---TNLFMANALIDMYAKCGAMARG 367

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
            ++FKEM    +    V + +AIS       + +   +     K+G + D   G++ + +
Sbjct: 368 FEVFKEMKEKDI----VIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD---GSTFLGL 420

Query: 373 YSKCEE---LEAAERVFDMIK-----DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
              C     ++   R F+ I       + V  +  M+  + +AG    AY L   M    
Sbjct: 421 LCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMP--- 477

Query: 425 VPPNVITWNVLISG 438
           + PN I W  L+SG
Sbjct: 478 MRPNAIVWGALLSG 491



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 203/440 (46%), Gaps = 35/440 (7%)

Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD 172
           +F   +  N++ ++++I  +  +  + E ++LF  + + GL+   F FP +L+AC     
Sbjct: 67  LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126

Query: 173 FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISG 232
            + G  +HSLV+K G +       S+L++Y   G+L  A + F+ + ++  V W ++ SG
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186

Query: 233 YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG---- 288
           Y   G + EA  LF KM    +K        ++ +   +G  D    +VK ME +     
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246

Query: 289 ---------------------------ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
                                      +  D+ TW+ MI G+A N    + ++LF +M  
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
             + P+  +I   +S+C  L AL +G    SL  +  F  ++ + N+LI+MY+KC  +  
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
              VF  +K+KD+   N+ I+G  + G+   ++ +F + ++  + P+  T+  L+ G + 
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G   + +  F  +     +KR    +  ++  + + G  ++A   +R +      PN +
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDA---YRLICDMPMRPNAI 483

Query: 502 TILSVLPACAYLVASNKVKE 521
              ++L  C  LV   ++ E
Sbjct: 484 VWGALLSGCR-LVKDTQLAE 502



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 188/444 (42%), Gaps = 48/444 (10%)

Query: 12  LHSLLTK---KSNPRFRDTHLDFLCGNGRLNEAITVLDSI---------------ATQGA 53
           LHSL+ K     +     + L    G+GRLN+A  + D I                T G 
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGR 192

Query: 54  K--------------VRRNTY--INLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTK 96
                          V+ ++Y  + +L AC+    +     +  ++  +  + + FV+T 
Sbjct: 193 HREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTT 252

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           L+++YAKCG ++ AR VF+ M E+++ TWS MI  Y+ +   +E +ELF  M+Q+ L PD
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPD 312

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            F     L +C + G  + G+   SL+ +        + N+++ +Y KCG +      F+
Sbjct: 313 QFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFK 372

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            M EKD V  N+ ISG  + G    +  +F +  +  I     TF  L+      G    
Sbjct: 373 EMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQD 432

Query: 277 AMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            +     +  +  +   V  + CM+  + + G    A  L  +M    + PN +   + +
Sbjct: 433 GLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMP---MRPNAIVWGALL 489

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGN--SLINMYSKCEELEAAERVFDMIKDKD 393
           S C  +K   +   +    + +   +    GN   L N+YS     + A  V DM+  K 
Sbjct: 490 SGCRLVKDTQLAETVLKELIAL---EPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKG 546

Query: 394 VYSWNSMIAGYCQAGYCGKAYELF 417
           +      I GY      GK +E  
Sbjct: 547 M----KKIPGYSWIELEGKVHEFL 566



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 34/243 (13%)

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
           N +K+IH  ++   L     ++N L+          YS  +F      +I  +NSLI G+
Sbjct: 27  NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC------ 630
           V +  +H  LDLF  ++  GL  +  TF  ++ A + A    LG  +   + +C      
Sbjct: 87  VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146

Query: 631 ----------------------YQIIP--MIEHYSAMIDLYGRSGKLEEAMEFIE---DM 663
                                 +  IP   +  ++A+   Y  SG+  EA++  +   +M
Sbjct: 147 AAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEM 206

Query: 664 PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE-PGDVLIQRLILQIYAICGKPEDA 722
            ++PDS     +L+AC   G++D     ++ + ++E   +  ++  ++ +YA CGK E A
Sbjct: 207 GVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKA 266

Query: 723 LKV 725
             V
Sbjct: 267 RSV 269


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  324 bits (830), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 210/748 (28%), Positives = 361/748 (48%), Gaps = 80/748 (10%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-- 253
           N++++ +VK G +  AR  F++M ++  V W  ++  Y +    DEA +LF +MCR    
Sbjct: 83  NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142

Query: 254 -------------------------------IKLGVVT------FNILIRSYNQLGQCDV 276
                                          +KLG  T       N+L++SY ++ + D+
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
           A  + + +       D  T+  +I+G+ ++G  ++++ LF +M   G  P+  T +  + 
Sbjct: 203 ACVLFEEIPE----KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLK 258

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           A   L   A+G ++H+L+V  GF+ D  VGN +++ YSK + +     +FD + + D  S
Sbjct: 259 AVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVS 318

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-----GYIQNGNE------ 445
           +N +I+ Y QA     +   F +MQ          +  ++S       +Q G +      
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL 378

Query: 446 -----------DEAVDLFQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKNNALG 486
                      +  VD++ +    ++         +R T SW +LI+GY Q G     L 
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLK 438

Query: 487 VFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
           +F KM+ S    +  T  +VL A A   +    K++H  ++R     ++   + L+D YA
Sbjct: 439 LFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 498

Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
           K G+I  +  +F+ M  ++ ++WN+LI  +  +G   AA+  F +M   GL+P+  + L 
Sbjct: 499 KCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILG 558

Query: 607 IILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
           ++ A S  G V+ G + F +++  Y I P  +HY+ M+DL GR+G+  EA + +++MP E
Sbjct: 559 VLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFE 618

Query: 667 PDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP-GDVLIQRLILQIYAICGKPEDALKV 725
           PD  +W ++L ACRIH N  LA  A E+LF +E   D      +  IYA  G+ E    V
Sbjct: 619 PDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDV 678

Query: 726 RKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP-----ENVTARS 780
           +K  RE   +      W+EV + ++ F +   +    D +   +  +      E     +
Sbjct: 679 KKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDT 738

Query: 781 SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSM 840
           S     ++E+ K E    HSE+LA+AFALI + +    I ++KN+R C  CH   K +S 
Sbjct: 739 SSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGC-PIVVMKNLRACRDCHAAIKLISK 797

Query: 841 MHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +   EI + D+   HHF  G CSCGDYW
Sbjct: 798 IVKREITVRDTSRFHHFSEGVCSCGDYW 825



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 144/566 (25%), Positives = 252/566 (44%), Gaps = 99/566 (17%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG--LF 154
           ++S + K G +  AR++F+ M +R + TW+ ++G Y+R+  + E  +LF  M +      
Sbjct: 85  MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSC--VRRVRNSVLAVYVKCGKLIWAR 212
           PD   F  +L  C +     A   +H+  +KLG        V N +L  Y +  +L  A 
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
             FE + EKD V +N++I+GY + G   E+  LF KM +   +    TF+ ++++   +G
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV--VG 262

Query: 273 QCDVAMEMVKRMESLGITP-----------------------------------DVFTWT 297
             D A+   +++ +L +T                                    D  ++ 
Sbjct: 263 LHDFALG--QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYN 320

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            +IS ++Q  +   +L  F+EM  +G         + +S   +L +L MG ++H  A+ +
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL-L 379

Query: 358 GFTDDVL-VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
              D +L VGNSL++MY+KCE  E AE +F  +  +   SW ++I+GY Q G  G   +L
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439

Query: 417 FIKMQESDVPP-----------------------------------NVITWNVLISGYIQ 441
           F KM+ S++                                     NV + + L+  Y +
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAK 499

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G+  +AV +F+ M       RN  SWN+LI+ +   G    A+G F KM  S   P+ V
Sbjct: 500 CGSIKDAVQVFEEMP-----DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554

Query: 502 TILSVLPACAYLVASNKVKE-------IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
           +IL VL AC++     +  E       I+G   ++   +       ++D   ++G    +
Sbjct: 555 SILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA------CMLDLLGRNGRFAEA 608

Query: 555 RTIFDGMS-SKDIITWNSLICGYVLH 579
             + D M    D I W+S++    +H
Sbjct: 609 EKLMDEMPFEPDEIMWSSVLNACRIH 634



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 222/487 (45%), Gaps = 39/487 (8%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF---LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           T+  LL  C D+   +   ++HAF   L   T   + V   LL  Y +   LD A  +FE
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
           ++ E++  T++ +I  Y +D  + E + LF  M Q G  P DF F  +L+A     DF  
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G+ +H+L +  G S    V N +L  Y K  +++  R  F+ M E D V++N +IS Y Q
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328

Query: 236 IGENDEAHRLFDKM-CR-------------------EEIKLG--------VVTFNILIRS 267
             + + +   F +M C                      +++G        + T + ++  
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388

Query: 268 YNQL----GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
            N L     +C++  E     +SL     V +WT +ISG+ Q G     L LF +M    
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTV-SWTALISGYVQKGLHGAGLKLFTKMRGSN 447

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           +  +  T  + + A     +L +G ++H+  ++ G  ++V  G+ L++MY+KC  ++ A 
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
           +VF+ + D++  SWN++I+ +   G    A   F KM ES + P+ ++   +++     G
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
             ++  + FQ M     +      +  ++     LG+        + M    F P+ +  
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACML---DLLGRNGRFAEAEKLMDEMPFEPDEIMW 624

Query: 504 LSVLPAC 510
            SVL AC
Sbjct: 625 SSVLNAC 631



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 150/315 (47%), Gaps = 47/315 (14%)

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           +K GF  D    N ++    +  ++ AA +V+D +  K+  S N+MI+G+ + G    A 
Sbjct: 40  IKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSAR 99

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
           +LF  M +      V+TW +L+  Y +N + DEA  LF++M ++                
Sbjct: 100 DLFDAMPDR----TVVTWTILMGWYARNSHFDEAFKLFRQMCRS---------------- 139

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS 534
                             SSC  P+ VT  ++LP C   V  N V ++H   ++   +++
Sbjct: 140 ------------------SSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTN 181

Query: 535 --LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
             L V N L+ +Y +   +  +  +F+ +  KD +T+N+LI GY   G +  ++ LF +M
Sbjct: 182 PFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM 241

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVD--LGKKVFC-SITECYQIIPMIEHYSAMIDLYGR 649
           +  G +P+  TF  ++ A  + G+ D  LG+++   S+T  +     + +   ++D Y +
Sbjct: 242 RQSGHQPSDFTFSGVLKA--VVGLHDFALGQQLHALSVTTGFSRDASVGN--QILDFYSK 297

Query: 650 SGKLEEAMEFIEDMP 664
             ++ E     ++MP
Sbjct: 298 HDRVLETRMLFDEMP 312



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 107/464 (23%), Positives = 193/464 (41%), Gaps = 77/464 (16%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVF 92
           +G   E+I +   +   G +    T+  +L+A +  +   L ++LHA L++ T    D  
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA-LSVTTGFSRDAS 286

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V  ++L  Y+K   + + R +F++M E +  +++ +I +YS+  ++   +  F  M   G
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
               +F F  +L    N    + G+ +H   +      +  V NS++ +Y KC     A 
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------- 261
             F+S+ ++  V+W ++ISGY Q G +    +LF KM    ++    TF           
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466

Query: 262 ---------NILIRSYN------------QLGQCDVAMEMVKRMESLGITPD--VFTWTC 298
                      +IRS N               +C    + V+  E +   PD    +W  
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEM---PDRNAVSWNA 523

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-------IH 351
           +IS  A NG    A+  F +M   G+ P+ V+I   ++AC+    +  G E       I+
Sbjct: 524 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 583

Query: 352 SLAVK--------------------------MGFTDDVLVGNSLINM--YSKCEEL--EA 381
            +  K                          M F  D ++ +S++N     K + L   A
Sbjct: 584 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 643

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
           AE++F M K +D  ++ SM   Y  AG   K  ++   M+E  +
Sbjct: 644 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 208/624 (33%), Positives = 324/624 (51%), Gaps = 46/624 (7%)

Query: 287 LGITPDVFT--WTCMISGFAQNGRTSQALDLFKEM--SFVGVMPNGVTITSAISACTDLK 342
           LG  P + T  +  ++  F   G    AL LF EM  +      +  T   A+ +C+ + 
Sbjct: 75  LGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMC 134

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           AL +G  + + AVK G   D  V +SLI+MY+ C ++ AA  VFD  ++  V  WN+++A
Sbjct: 135 ALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVA 194

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS--GYIQN--------GNEDEA---- 448
            Y + G   +  E+F  M E  V  + +T   +++  G I +        G+ DE     
Sbjct: 195 AYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLAR 254

Query: 449 --------VDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
                   +D++ + G+  K +R        +  +W+++I+GY Q  Q   ALG+F +MQ
Sbjct: 255 NPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQ 314

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
            +   PN VT++SVL ACA L A    K +H  V R+ L  +  +  +L+D YAK G I 
Sbjct: 315 LARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCID 374

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            +   F+ M  K+  TW +LI G   +G    AL+LF  M+  G++P   TF+ +++A S
Sbjct: 375 DAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACS 434

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
            + +V+ G++ F S+   Y I P +EHY  M+DL GR+G ++EA +FI  MPIEP++ IW
Sbjct: 435 HSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIW 494

Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
            ALL++C +H N+ +   A++++  L P       L+  IYA  G+ +DA  VRK  ++ 
Sbjct: 495 RALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDR 554

Query: 733 TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--------TARSSHSG 784
               + G   IE+  +V+ F      +S    L    Q V E +           ++   
Sbjct: 555 GIEKTPGCSLIELDGVVFEFFA---EDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVR 611

Query: 785 LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
           L +EE EKE     HSEKLA+AF L+       TIR+ KN+R+C  CH   K +S ++  
Sbjct: 612 LEVEEREKEVSVSHHSEKLAIAFGLMKLDPGA-TIRLSKNLRVCADCHSATKLISKVYDR 670

Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
           EI + D    HHFK+G CSC DYW
Sbjct: 671 EIVVRDRNIFHHFKDGTCSCNDYW 694



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 189/432 (43%), Gaps = 87/432 (20%)

Query: 49  ATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCG 105
           A       ++T    L++C    ++ + R + A+     LV   D FV + L+ +YA CG
Sbjct: 112 AASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVA--DRFVLSSLIHMYASCG 169

Query: 106 CLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQ 165
            +  AR VF+   E  +  W+A++ AY ++  W EVVE+F  M++ G+  D+     ++ 
Sbjct: 170 DVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVT 229

Query: 166 ACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA 225
           ACG  GD + GK +   V + G++   ++  +++ +Y KCG++  ARR F+ M  +D VA
Sbjct: 230 ACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVA 289

Query: 226 WNSMISGYFQIGENDEAHRLFDKM------------------C----------------- 250
           W++MISGY Q  +  EA  LF +M                  C                 
Sbjct: 290 WSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVR 349

Query: 251 REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTS 310
           R+ + L  +    L+  Y + G  D A+E  + M       + +TWT +I G A NGR  
Sbjct: 350 RKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMP----VKNSWTWTALIKGMATNGRGR 405

Query: 311 QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI 370
           +AL+LF  M   G+ P  VT    + AC+           HS  V+ G            
Sbjct: 406 EALELFSSMREAGIEPTDVTFIGVLMACS-----------HSCLVEEG------------ 442

Query: 371 NMYSKCEELEAAERVFD-MIKD----KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
                        R FD M +D      V  +  M+    +AG   +AY+    M    +
Sbjct: 443 ------------RRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMP---I 487

Query: 426 PPNVITWNVLIS 437
            PN + W  L+S
Sbjct: 488 EPNAVIWRALLS 499


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 203/619 (32%), Positives = 314/619 (50%), Gaps = 48/619 (7%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           DV TW  M+  F  +    +AL  + EM      +P+  T  S +  C  L    +G  +
Sbjct: 42  DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H   VK     D+ +  +L+NMY+ C +L++A  +F+ +  ++   W SMI+GY +    
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCP 161

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISG-------------------------------- 438
            +A  L+ KM+E    P+ +T   L+S                                 
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221

Query: 439 ---YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS-S 494
              Y + G+   A  +F ++   D       +W++LI GY +  +   AL +FR++   S
Sbjct: 222 VNMYAKCGDLKTARQVFDKLSDKD-----VYAWSALIFGYVKNNRSTEALQLFREVAGGS 276

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              PN VTIL+V+ ACA L      + +H  + R     S+ + NSLID ++K G+I  +
Sbjct: 277 NMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAA 336

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           + IFD MS KD+I+WNS++ G+ LHG    AL  F  M++  L+P+  TF+ ++ A S A
Sbjct: 337 KRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHA 396

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G+V  GKK+F  I   Y +    EHY  M+DL  R+G L EA EFI  MP++PD +IW +
Sbjct: 397 GLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGS 456

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           +L ACR++ N++L   A   L  LEP +  +  L+  IYA      +  KVR+L  E   
Sbjct: 457 MLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVRELMNEKGI 516

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEE 789
           + + G   + + N+ ++F+ G  S      +   L+ V E +      A +S   L I++
Sbjct: 517 QKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLAGYVADTSEVLLNIDD 576

Query: 790 EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
            +KEE    HSEKLAL + L+  S+    I I+KN+R+C  CH   K VS ++  +I L 
Sbjct: 577 NKKEESVSQHSEKLALCYGLL-KSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLR 635

Query: 850 DSKCLHHFKNGQCSCGDYW 868
           D    HHFK+G CSC DYW
Sbjct: 636 DRNRFHHFKDGSCSCRDYW 654



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 185/376 (49%), Gaps = 33/376 (8%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL-FPDDFLFPKILQACG 168
           A  VF   RE ++ TW++M+ A+      R  ++ +  M++     PD F FP +L+ C 
Sbjct: 31  AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
              +F+ GK++H  V+K  +     +  ++L +Y  CG L  AR  FE M  ++ V W S
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
           MISGY +    +EA  L+ KM  +      VT   L+ +  +L    V M++   +  + 
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210

Query: 289 IT-------------------------------PDVFTWTCMISGFAQNGRTSQALDLFK 317
           +                                 DV+ W+ +I G+ +N R+++AL LF+
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270

Query: 318 EMSFVGVM-PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
           E++    M PN VTI + ISAC  L  L  G  +H    +      V + NSLI+M+SKC
Sbjct: 271 EVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKC 330

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
            +++AA+R+FD +  KD+ SWNSM+ G+   G   +A   F  MQ +D+ P+ IT+  ++
Sbjct: 331 GDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVL 390

Query: 437 SGYIQNGNEDEAVDLF 452
           +     G   E   LF
Sbjct: 391 TACSHAGLVQEGKKLF 406



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 178/386 (46%), Gaps = 73/386 (18%)

Query: 196 NSVLAVYVKCGKLI--WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE- 252
           N ++A  +  G L   +A   F    E D + WNSM+  +        A + + +M    
Sbjct: 14  NKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERS 73

Query: 253 --------------------EIKLG------VVTF---------NILIRSYNQLGQCDVA 277
                               E K+G      VV +           L+  Y   G    A
Sbjct: 74  RNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSA 133

Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
             + +RM       +   WT MISG+ +N   ++AL L+K+M   G  P+ VT+ + +SA
Sbjct: 134 RFLFERMGH----RNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSA 189

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C +LK L +GM++HS   +M      ++G++L+NMY+KC +L+ A +VFD + DKDVY+W
Sbjct: 190 CAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAW 249

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQ-ESDVPPNVITWNVLISGYIQNGN------------ 444
           +++I GY +     +A +LF ++   S++ PN +T   +IS   Q G+            
Sbjct: 250 SALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYIT 309

Query: 445 ----------EDEAVDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALG 486
                      +  +D+F + G  D  KR        +  SWNS++ G+   G    AL 
Sbjct: 310 RTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALA 369

Query: 487 VFRKMQSSCFYPNCVTILSVLPACAY 512
            FR MQ++   P+ +T + VL AC++
Sbjct: 370 QFRLMQTTDLQPDEITFIGVLTACSH 395



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 180/359 (50%), Gaps = 7/359 (1%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-LVTEIDVFVKTKL 97
           NEA+ +   +   G      T   L+ AC +   + +  KLH+ +  +  +I   + + L
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ-DGLFPD 156
           +++YAKCG L  AR+VF+ + ++++Y WSA+I  Y ++ R  E ++LF  +     + P+
Sbjct: 222 VNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPN 281

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           +     ++ AC   GD E G+ +H  + +        + NS++ ++ KCG +  A+R F+
Sbjct: 282 EVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFD 341

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
           SM  KD ++WNSM++G+   G   EA   F  M   +++   +TF  ++ + +  G    
Sbjct: 342 SMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGLVQE 401

Query: 277 AMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
             ++   +E+L G+      + CM+    + G  ++A +  + M    + P+G    S +
Sbjct: 402 GKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMP---LQPDGAIWGSML 458

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
            AC     L +G E     +K+  T+D  V   L N+Y+K +     ++V +++ +K +
Sbjct: 459 GACRVYNNLELGEEAARFLLKLEPTNDG-VYILLSNIYAKRKMWNEVKKVRELMNEKGI 516



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 41/320 (12%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           R T+ +LL+ C       + + LH   +  +   D++++T LL++YA CG L  AR +FE
Sbjct: 79  RFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFE 138

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            M  RN   W++MI  Y ++    E + L+  M +DG  PD+     ++ AC    D   
Sbjct: 139 RMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGV 198

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +HS + ++ M     + ++++ +Y KCG L  AR+ F+ + +KD  AW+++I GY +
Sbjct: 199 GMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVK 258

Query: 236 IGENDEAHRLF------------------------------------DKMCREEIKLGVV 259
              + EA +LF                                    D + R +    V 
Sbjct: 259 NNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVS 318

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
             N LI  +++ G  D A  +   M       D+ +W  M++GFA +G   +AL  F+ M
Sbjct: 319 LNNSLIDMFSKCGDIDAAKRIFDSMS----YKDLISWNSMVNGFALHGLGREALAQFRLM 374

Query: 320 SFVGVMPNGVTITSAISACT 339
               + P+ +T    ++AC+
Sbjct: 375 QTTDLQPDEITFIGVLTACS 394



 Score = 40.4 bits (93), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 5/146 (3%)

Query: 536 PVMNSLIDTYAKSGN--IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
           P +N LI      G+  + Y+ ++F      D++TWNS++  +V       AL  + +M 
Sbjct: 11  PSLNKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEML 70

Query: 594 SFGLK-PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
                 P+R TF S++   +L     +GK +   + + Y +   +   + ++++Y   G 
Sbjct: 71  ERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVK-YMLHSDLYIETTLLNMYAACGD 129

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTA 678
           L+ A    E M    +  +W ++++ 
Sbjct: 130 LKSARFLFERMG-HRNKVVWTSMISG 154


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 195/563 (34%), Positives = 304/563 (53%), Gaps = 52/563 (9%)

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           ++H+     G   D++V N L+ M +K ++L  A  +F+ ++++D  SW+ MI G+ + G
Sbjct: 21  QVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFVKNG 80

Query: 409 YCGKAYELFIKMQESDVPPN---------------------VITWNVLISG--------- 438
              + ++ F ++  +   P+                     +I   VL +G         
Sbjct: 81  DYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCS 140

Query: 439 -----YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
                Y + G  D A  LF RM K D V R       +IAGY + G+ N +  +F +M+ 
Sbjct: 141 TLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTV-----MIAGYAECGKPNESWVLFDQMRR 195

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
             F P+ V +++++ ACA L A NK + +H  V  R     + +  ++ID YAK G+I  
Sbjct: 196 DGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDS 255

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           SR IFD M  K++I+W+++I  Y  HG    AL+LF  M + G+ PNR TF+S++ A S 
Sbjct: 256 SREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSH 315

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           AG+VD G ++F  ++  Y + P ++HY+ M+DL GR+G+L++A+  IE+M +E D  IW 
Sbjct: 316 AGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWC 375

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLE---PGDVLIQRLILQIYAICGKPEDALKVRKLER 730
           A L ACRIH  +DLA  A + L  L+   PG  +   L+  IYA  G+ +D  K+R L  
Sbjct: 376 AFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYI---LLSNIYANAGRWKDVAKIRNLMA 432

Query: 731 ENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS----SHSGLC 786
           +   +   G  WIEV N++Y F  G  S   S+ +Y  L+++ + + +      ++S L 
Sbjct: 433 KRRLKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLH 492

Query: 787 -IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCE 845
            ++EE K  I   HSEKLA+AF LI +      IRI KN+R+C  CH   K VS +   +
Sbjct: 493 DVDEEVKLGILHAHSEKLAIAFGLIATPDGT-PIRITKNLRVCGDCHSFCKLVSAITQRD 551

Query: 846 IFLADSKCLHHFKNGQCSCGDYW 868
           I + D+   HHFK G CSCGDYW
Sbjct: 552 IIVRDANRFHHFKEGICSCGDYW 574



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 126/502 (25%), Positives = 229/502 (45%), Gaps = 59/502 (11%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           +I+ L  C    +I   +++HA +     I D+ V  KLL + AK   L  A  +F  M 
Sbjct: 6   FISTLFKC---RNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKME 62

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           ER+  +WS MIG + ++  +    + F  +++ G  PD+F  P +++AC +      G+L
Sbjct: 63  ERDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRL 122

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +HS V+K G+     V ++++ +Y KCG +  A++ F+ M +KD V    MI+GY + G+
Sbjct: 123 IHSTVLKNGLHLDNFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGK 182

Query: 239 NDEAHRLFDKMCREEI---KLGVVTF--------------------------------NI 263
            +E+  LFD+M R+     K+ +VT                                   
Sbjct: 183 PNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTA 242

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           +I  Y + G  D + E+  RME      +V +W+ MI  +  +G+  +AL+LF  M   G
Sbjct: 243 MIDMYAKCGSIDSSREIFDRMEQ----KNVISWSAMIGAYGYHGQGREALELFHMMLNSG 298

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSL-AVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           ++PN +T  S + AC+    +  G+++ SL +V  G   DV     ++++  +   L+ A
Sbjct: 299 IIPNRITFISLLYACSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQA 358

Query: 383 ERVFD-MIKDKDVYSWNSMIAGYC----QAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
            R+ + M  +KD   W + + G C    Q     KA +L + +Q  +    ++  N+   
Sbjct: 359 LRLIENMEVEKDEGIWCAFL-GACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNI--- 414

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
            Y   G   +   +   M K    K    +W  +     + G  +N+      ++S+  Y
Sbjct: 415 -YANAGRWKDVAKIRNLMAKRRLKKIPGYTWIEVDNIIYRFGAGDNS-----HLRSNEIY 468

Query: 498 PNCVTILSVLPACAYLVASNKV 519
               ++   L +  Y+  +N V
Sbjct: 469 EMLKSLSQKLESAGYVPDTNSV 490



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 143/287 (49%), Gaps = 2/287 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG           +   G+K    +   +++AC D+  + + R +H+  L     +D FV
Sbjct: 79  NGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFV 138

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAKCG +D+A+++F+ M +++L T + MI  Y+   +  E   LF  M +DG 
Sbjct: 139 CSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRRDGF 198

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD      I+ AC   G     +L+H  V     S    +  +++ +Y KCG +  +R 
Sbjct: 199 VPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSRE 258

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M++K+ ++W++MI  Y   G+  EA  LF  M    I    +TF  L+ + +  G 
Sbjct: 259 IFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGL 318

Query: 274 CDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
            D  +++   M  S G+ PDV  +TCM+    + GR  QAL L + M
Sbjct: 319 VDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENM 365



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 77/150 (51%), Gaps = 7/150 (4%)

Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
           ++K++H  V    +   L V N L+   AK  ++V +  +F+ M  +D ++W+ +I G+V
Sbjct: 18  QIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKMEERDPVSWSVMIGGFV 77

Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA-HSLAGMVDLGKKVFCSITECYQIIPM 636
            +G +      F ++   G KP+  +   +I A     G++ +G+ +  ++ +       
Sbjct: 78  KNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLI-MGRLIHSTVLKNGL---H 133

Query: 637 IEHY--SAMIDLYGRSGKLEEAMEFIEDMP 664
           ++++  S ++D+Y + G ++ A +  + MP
Sbjct: 134 LDNFVCSTLVDMYAKCGMIDNAKQLFDRMP 163


>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
 gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 200/610 (32%), Positives = 315/610 (51%), Gaps = 54/610 (8%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L RSY  LG+ D ++ +    +     P+VF+++ +I    Q+    +A   + +M   G
Sbjct: 85  LQRSYAALGRLDCSVFVFNTFDE----PNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCG 140

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           V PN  T +S + +C+    L  G  +H  A+K+G   D+ V   L+++Y++  ++  A 
Sbjct: 141 VEPNAFTFSSVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCAR 196

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
                                          +LF KM E     ++++   +++ Y + G
Sbjct: 197 -------------------------------QLFDKMPER----SLVSLTTMLTCYSKMG 221

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
             D+A  LF+ M + D V      WN +I GY Q G  N +L +FR+M  +   PN VT+
Sbjct: 222 ELDKARSLFEGMKERDVV-----CWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTV 276

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
           L+VL AC  L A    + IH  +  + ++ ++ V  +LID Y+K G++  +R +FD +  
Sbjct: 277 LAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRD 336

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           KD++ WNS+I GY +HGF   AL LF++M   G KP   TF+ I+ A    G+V+ G+  
Sbjct: 337 KDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSF 396

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           F  + + Y I P IEHY  M++L GR+G LEEA   +++M I  D  +W  LL  CR+H 
Sbjct: 397 FRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHV 456

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
           NI L     + L D +  +     L+  +YA  G  E   K+R L +E+      G   I
Sbjct: 457 NIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSI 516

Query: 744 EVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTAR--SSHSGLCIE---EEEKEEISGI 798
           EV N V+ FV G      S  +Y  L  +   + AR  +  + + +    EE+KE+   +
Sbjct: 517 EVDNKVHEFVAGERKHPKSKEIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEV 576

Query: 799 HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
           HSEKLA+AF LI S++   T++IVKN+R+C  CH   K +S +   +I + D    HHF+
Sbjct: 577 HSEKLAIAFGLI-STKPGTTVKIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFE 635

Query: 859 NGQCSCGDYW 868
           +G CSCGDYW
Sbjct: 636 DGLCSCGDYW 645



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 192/396 (48%), Gaps = 43/396 (10%)

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
           KL   YA  G LD +  VF    E N++++SA+I ++ + + +      +  M+  G+ P
Sbjct: 84  KLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEP 143

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           + F F  +L++C      E+GK++H   IKLG+     VR  ++ VY + G ++ AR+ F
Sbjct: 144 NAFTFSSVLKSC----SLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLF 199

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           + M E+                                    +V+   ++  Y+++G+ D
Sbjct: 200 DKMPERS-----------------------------------LVSLTTMLTCYSKMGELD 224

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            A  + + M+      DV  W  MI G+AQ+G  +++L LF+ M     +PN VT+ + +
Sbjct: 225 KARSLFEGMKE----RDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVL 280

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
           SAC  L AL  G  IHS     G   +V VG +LI+MYSKC  LE A  VFD I+DKDV 
Sbjct: 281 SACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVV 340

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           +WNSMI GY   G+   A +LF +M E+   P  IT+  ++S     G  +E    F+ M
Sbjct: 341 AWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLM 400

Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
                ++     +  ++    + G    A G+ + M
Sbjct: 401 RDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNM 436



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 149/306 (48%), Gaps = 15/306 (4%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T +L+ Y+K G LD AR +FE M+ER++  W+ MIG Y++     E ++LF  M+     
Sbjct: 211 TTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAI 270

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P++     +L ACG  G  E+G+ +HS +   G+     V  +++ +Y KCG L  AR  
Sbjct: 271 PNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLV 330

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F+ + +KD VAWNSMI GY   G +  A +LF++M     K   +TF  ++ +    G  
Sbjct: 331 FDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLV 390

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
           +      + M +  GI P +  + CM++   + G   +A  L K M+   +  + V   +
Sbjct: 391 EEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMT---IAADPVLWGT 447

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS-----LINMYSKCEELEAAERVFDM 388
            +  C     + +G EI    V      D  + NS     L NMY+     E   ++  +
Sbjct: 448 LLGCCRLHVNIKLGEEIAKFLV------DQKLANSGTYVLLSNMYAATGNWEGVAKMRTL 501

Query: 389 IKDKDV 394
           +K+  +
Sbjct: 502 MKEHGI 507



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 80/144 (55%), Gaps = 1/144 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           +G  NE++ +   +    A     T + +L AC    ++   R +H+++ N   +I+V V
Sbjct: 251 SGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHV 310

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +Y+KCG L+DAR VF+ +R++++  W++MI  Y+     +  ++LF  M + G 
Sbjct: 311 GTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGH 370

Query: 154 FPDDFLFPKILQACGNCGDFEAGK 177
            P D  F  IL ACG+ G  E G+
Sbjct: 371 KPTDITFIGILSACGHGGLVEEGR 394



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 103/207 (49%), Gaps = 13/207 (6%)

Query: 521 EIHGCVLRRSLESSLPVMN-SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
           +IH  +LRR L  + P++N  L  +YA  G +  S  +F+     ++ +++++I  +V  
Sbjct: 65  QIHASLLRRGLYHN-PILNFKLQRSYAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQS 123

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
             +  A   + QM S G++PN  TF S++ + SL    + GK + C   +   +   +  
Sbjct: 124 RLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCSL----ESGKVLHCQAIK-LGLGSDLYV 178

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD-L 698
            + ++D+Y R G +  A +  + MP     S+   +LT     G +D A      LF+ +
Sbjct: 179 RTGLVDVYARGGDVVCARQLFDKMPERSLVSL-TTMLTCYSKMGELDKA----RSLFEGM 233

Query: 699 EPGDVLIQRLILQIYAICGKPEDALKV 725
           +  DV+   +++  YA  G P ++LK+
Sbjct: 234 KERDVVCWNVMIGGYAQSGVPNESLKL 260


>gi|15241448|ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g44230
 gi|9759524|dbj|BAB10990.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|91806984|gb|ABE66219.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332007694|gb|AED95077.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 197/616 (31%), Positives = 323/616 (52%), Gaps = 56/616 (9%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITP----DVFTWTCMISGFAQNGRTSQALDLFKEM 319
           LIR+  +LG   V M+   R     I P    + F WT +I G+A  G+  +A+ ++  M
Sbjct: 87  LIRTLTKLG---VPMDPYARRV---IEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCM 140

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
               + P   T ++ + AC  +K L +G + H+   ++     V VGN++I+MY KCE +
Sbjct: 141 RKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESI 200

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
           + A +VFD + ++DV SW  +IA Y + G    A ELF    ES    +++ W  +++G+
Sbjct: 201 DCARKVFDEMPERDVISWTELIAAYARVGNMECAAELF----ESLPTKDMVAWTAMVTGF 256

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
            QN    EA++ F RM K+  ++ +  +    I+   QLG    A    +  Q S + P+
Sbjct: 257 AQNAKPQEALEYFDRMEKSG-IRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPS 315

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
              ++                                  ++LID Y+K GN+  +  +F 
Sbjct: 316 DHVVIG---------------------------------SALIDMYSKCGNVEEAVNVFM 342

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQM-KSFGLKPNRGTFLSIILAHSLAGMVD 618
            M++K++ T++S+I G   HG    AL LF  M     +KPN  TF+  ++A S +G+VD
Sbjct: 343 SMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVD 402

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            G++VF S+ + + + P  +HY+ M+DL GR+G+L+EA+E I+ M +EP   +W ALL A
Sbjct: 403 QGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGA 462

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
           CRIH N ++A +A E LF+LEP  +    L+  +YA  G     L+VRKL +E   + + 
Sbjct: 463 CRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTP 522

Query: 739 GQCWIEVKN-LVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEK 792
              W+  KN  ++ F  G  +   S+ +   L+ + E +T       L      + +  K
Sbjct: 523 AVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAK 582

Query: 793 EEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
             I   H+EKLALAF+L+ +++   TI I+KN+RMC+ CH+  +  S +    I + D+ 
Sbjct: 583 RLILIQHTEKLALAFSLLTTNR-DSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNM 641

Query: 853 CLHHFKNGQCSCGDYW 868
             HHF++G CSCGD+W
Sbjct: 642 RFHHFRSGDCSCGDFW 657



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 217/462 (46%), Gaps = 49/462 (10%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           GR +        I+ Q  ++  ++ I+ L  CI+ N I   +++H   L    +   ++ 
Sbjct: 29  GRTSNNSGTFSEISNQ-KELLVSSLISKLDDCINLNQI---KQIHGHVLRKGLDQSCYIL 84

Query: 95  TKLLSVYAKCGCLDD--AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           TKL+    K G   D  AR V E ++ RN + W+A+I  Y+ + ++ E + ++  M ++ 
Sbjct: 85  TKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEE 144

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P  F F  +L+ACG   D   G+  H+   +L   C   V N+++ +YVKC  +  AR
Sbjct: 145 ITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCAR 204

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + F+ M E+D ++W  +I+ Y ++G  + A  LF+ +  +++    V +  ++  + Q  
Sbjct: 205 KVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDM----VAWTAMVTGFAQNA 260

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
           +   A+E   RME  GI  D                                    VT+ 
Sbjct: 261 KPQEALEYFDRMEKSGIRAD-----------------------------------EVTVA 285

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGF--TDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
             ISAC  L A         +A K G+  +D V++G++LI+MYSKC  +E A  VF  + 
Sbjct: 286 GYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN 345

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKM-QESDVPPNVITWNVLISGYIQNGNEDEAV 449
           +K+V++++SMI G    G   +A  LF  M  ++++ PN +T+   +     +G  D+  
Sbjct: 346 NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGR 405

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            +F  M +   V+     +  ++    + G+   AL + + M
Sbjct: 406 QVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTM 447



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 167/342 (48%), Gaps = 20/342 (5%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           NT I++   C    SI  ARK+    + + E DV   T+L++ YA+ G ++ A E+FE +
Sbjct: 188 NTMIDMYVKC---ESIDCARKV---FDEMPERDVISWTELIAAYARVGNMECAAELFESL 241

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             +++  W+AM+  ++++ + +E +E F  M + G+  D+      + AC   G  +   
Sbjct: 242 PTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYAD 301

Query: 178 LMHSLVIKLGMSCVRRV--RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
               +  K G S    V   ++++ +Y KCG +  A   F SM+ K+   ++SMI G   
Sbjct: 302 RAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLAT 361

Query: 236 IGENDEAHRLFDKMCRE-EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDV 293
            G   EA  LF  M  + EIK   VTF   + + +  G  D   ++   M ++ G+ P  
Sbjct: 362 HGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTR 421

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
             +TCM+    + GR  +AL+L K MS   V P+G    + + AC     +    EI  +
Sbjct: 422 DHYTCMVDLLGRTGRLQEALELIKTMS---VEPHGGVWGALLGACR----IHNNPEIAEI 474

Query: 354 AVKMGFT-DDVLVGNSLI--NMYSKCEELEAAERVFDMIKDK 392
           A +  F  +  ++GN ++  N+Y+   +     RV  +IK+K
Sbjct: 475 AAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEK 516



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 119/236 (50%), Gaps = 11/236 (4%)

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV--YSRTIFD 559
           +++S L  C  L   N++K+IHG VLR+ L+ S  ++  LI T  K G  +  Y+R + +
Sbjct: 51  SLISKLDDCINL---NQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
            +  ++   W ++I GY + G +  A+ ++  M+   + P   TF +++ A      ++L
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167

Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
           G++ F + T   +    +   + MID+Y +   ++ A +  ++MP E D   W  L+ A 
Sbjct: 168 GRQ-FHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMP-ERDVISWTELIAAY 225

Query: 680 RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK-VRKLERENTR 734
              GN++ A    E    L   D++    ++  +A   KP++AL+   ++E+   R
Sbjct: 226 ARVGNMECAAELFE---SLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR 278



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 15/217 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACID-------SNSIHLARKLHAFLNLVT 87
           N +  EA+   D +   G +    T    + AC           ++ +A+K         
Sbjct: 259 NAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKS----GYSP 314

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
              V + + L+ +Y+KCG +++A  VF  M  +N++T+S+MI   +   R +E + LF  
Sbjct: 315 SDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHY 374

Query: 148 MV-QDGLFPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
           MV Q  + P+   F   L AC + G  + G+ +  S+    G+   R     ++ +  + 
Sbjct: 375 MVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRT 434

Query: 206 GKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDE 241
           G+L  A    ++M  E  G  W +++ G  +I  N E
Sbjct: 435 GRLQEALELIKTMSVEPHGGVWGALL-GACRIHNNPE 470


>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 201/588 (34%), Positives = 314/588 (53%), Gaps = 36/588 (6%)

Query: 291 PDVFTWTCMISGFAQNGR---TSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAM 346
           P+ F W  ++   A+       S+AL LF  M   G V PN  T  S + AC     L  
Sbjct: 81  PNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLRE 140

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G +IH L VK GF +D  V ++L+ MY  C  +E A  +F     K+V  ++    G CQ
Sbjct: 141 GKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFC----KNVVDFD----GSCQ 192

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                   EL  + Q+     NV+ WN++I G ++ G+   A +LF  M +     R+  
Sbjct: 193 -------MELDKRKQDG----NVVLWNIMIDGQVRLGDIKSAKNLFDEMPQ-----RSVV 236

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           SWN +I+GY Q G    A+ +F++MQSS   PN VT++SVLPA A + A    K IH   
Sbjct: 237 SWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYA 296

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
            +  +E    + ++L+D Y+K G+I  +  +F+ +  ++ ITW+++I  + +HG    A+
Sbjct: 297 GKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAI 356

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
             F  M   G+ PN   ++ I+ A S AG+V+ G+  F  + +   + P IEHY  M+DL
Sbjct: 357 IHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDL 416

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GR+G LEEA E I +MPIEPD  IW+ALL AC++H N+ +     E L +L P D    
Sbjct: 417 LGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSY 476

Query: 707 RLILQIYAICGKPEDALKVR-KLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
             +  +YA  G  E   +VR K++  + R++  G  WIE+  +++ F+    S S +  +
Sbjct: 477 VALSNLYASLGNWEAVARVRLKMKGMDIRKDP-GCSWIEIHGIIHEFLVEDDSHSKAKEI 535

Query: 766 YSWLQNVPENVTARSSHSG-----LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIR 820
            + L  +   + +           L  +E+E+      HSEK+A+AF LI S+   H ++
Sbjct: 536 QAMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLI-STAPQHPLK 594

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IVKN+R+C  CH + K +S+++  +I + D K  H F++G CSC DYW
Sbjct: 595 IVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 188/424 (44%), Gaps = 62/424 (14%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIG--AYSRDQRWR-EVVELFFLMVQDG-LFPDDFLFPK 162
           +D AR VF  M E N + W+ ++   A + D+  + E + LF  M+ DG + P+ F FP 
Sbjct: 68  IDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPS 127

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF------- 215
           +L+AC        GK +H L++K G      V ++++ +YV C  +  A   F       
Sbjct: 128 VLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDF 187

Query: 216 -----ESMDEK--DG--VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
                  +D++  DG  V WN MI G  ++G+   A  LFD+M +      VV++N++I 
Sbjct: 188 DGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQR----SVVSWNVMIS 243

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            Y Q G    A+ + + M+S  I P                                   
Sbjct: 244 GYAQNGHFIEAINLFQEMQSSNIDP----------------------------------- 268

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           N VT+ S + A   + AL +G  IH  A K     D ++G++L++MYSKC  ++ A +VF
Sbjct: 269 NYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVF 328

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
           + +  ++  +W+++I  +   G    A   F  M ++ V PN + +  ++S     G  +
Sbjct: 329 ETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVE 388

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           E    F  M K   ++     +  ++    + G    A  + R M      P+ V   ++
Sbjct: 389 EGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMP---IEPDDVIWKAL 445

Query: 507 LPAC 510
           L AC
Sbjct: 446 LGAC 449



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/408 (19%), Positives = 173/408 (42%), Gaps = 58/408 (14%)

Query: 39  NEAITVLDSIATQG-AKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTK 96
           +EA+ +  ++   G  K  R T+ ++L+AC  ++ +   +++H  +       D FV + 
Sbjct: 103 SEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISN 162

Query: 97  LLSVYAKCGCLDD----------------------------------------------- 109
           L+ +Y  C  ++D                                               
Sbjct: 163 LVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKS 222

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           A+ +F++M +R++ +W+ MI  Y+++  + E + LF  M    + P+      +L A   
Sbjct: 223 AKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIAR 282

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
            G  E GK +H    K  +     + ++++ +Y KCG +  A + FE++ +++ + W+++
Sbjct: 283 IGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAI 342

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLG 288
           I  +   G  ++A   F  M +  +    V +  ++ + +  G  +        M + +G
Sbjct: 343 IGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVG 402

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
           + P +  + CM+    + G   +A +L + M    + P+ V   + + AC   K L MG 
Sbjct: 403 LQPRIEHYGCMVDLLGRAGHLEEAEELIRNMP---IEPDDVIWKALLGACKMHKNLKMGE 459

Query: 349 EIHSLAVKMGFTDDVLVGN--SLINMYSKCEELEAAERVFDMIKDKDV 394
            +    +++   D    G+  +L N+Y+     EA  RV   +K  D+
Sbjct: 460 RVAETLMELAPHDS---GSYVALSNLYASLGNWEAVARVRLKMKGMDI 504



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 148/340 (43%), Gaps = 20/340 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL-VTEIDVFV 93
           NG   EAI +   + +        T +++L A     ++ L + +H +      EID  +
Sbjct: 248 NGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVL 307

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +Y+KCG +D+A +VFE + +RN  TWSA+IGA++   R  + +  F LM + G+
Sbjct: 308 GSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGV 367

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIK-LGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            P+D  +  IL AC + G  E G+   S ++K +G+         ++ +  + G L  A 
Sbjct: 368 TPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAE 427

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
               +M  E D V W +++ G  ++ +N +      +   E       ++  L   Y  L
Sbjct: 428 ELIRNMPIEPDDVIWKALL-GACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASL 486

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ--------NGRTSQALDLFKEMSFV- 322
           G  +    +  +M+ + I  D       I G           + +  +   +  EMS   
Sbjct: 487 GNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKL 546

Query: 323 ---GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
              G  PN    T  +   TD +  A  ++ HS  + + F
Sbjct: 547 RSNGYRPN----TLEVFLNTDEQERARALQYHSEKIAVAF 582


>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
          Length = 799

 Score =  323 bits (828), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 221/730 (30%), Positives = 360/730 (49%), Gaps = 103/730 (14%)

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI--KLGMSCVRR-------- 193
           LF  M + G+ PD F F   L  C       +    HSL++   L  +C+R         
Sbjct: 90  LFRRMRRAGVRPDGFTF-HFLFKC-----SSSSSRPHSLLLCTMLHAACLRTMLPSAAPF 143

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
           V NS++ +Y++ G    ARR F+ +  KD VAW  +ISG  ++G           +C  +
Sbjct: 144 VSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMG----------MLCDTQ 193

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
           + L                             S     DV +WT +I+ +++  R  +A+
Sbjct: 194 LLL-----------------------------SQAPVRDVISWTSLIAAYSRANRAREAV 224

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
             FK M   G+ P+ VT+ + +SAC  LK L +G  +H L  + G      +  +LI+MY
Sbjct: 225 GCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMY 284

Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
           +KC +   A++VFD +                     G+              P   +WN
Sbjct: 285 AKCGDFGHAQQVFDAL---------------------GRG-------------PRPQSWN 310

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
            +I GY ++G+ D A  LF  M   D +     ++NS++ GY   GQ   AL +F  M+ 
Sbjct: 311 AIIDGYCKHGHVDVARSLFDEMEVRDII-----TFNSMMTGYIHSGQLREALLLFMSMRR 365

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
                +  T++++L ACA L A  + + +H C+ +R +E+ + +  +L+D Y K G +  
Sbjct: 366 HDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDE 425

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           +  +F  M  +D+ TW ++I G   +G   AAL+ F QM+  G +PN  ++++++ A S 
Sbjct: 426 ATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSH 485

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           + +++ G+  F  +   Y I P IEHY  MIDL GRSG L+EAM+ ++ MPI+P++ IW 
Sbjct: 486 SCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPIQPNAVIWA 545

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
           ++L+ACR+H +IDLA  A E L  LEP +  +   +  IY    + E+A K+R L  E  
Sbjct: 546 SILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSRQWENASKIRMLMEERQ 605

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIE 788
            + + G   I V   V+ FV    S      + + L+ +   +     +  +S   + ++
Sbjct: 606 VKKTAGYSSITVAGQVHKFVVSDKSHPRILEIIAMLEEISHRLKSLGYSPLTSQITVDVD 665

Query: 789 EEEKEEISGIHSEKLALAFALIGSSQAPH-TIRIVKNIRMCVHCHETAKYVSMMHHCEIF 847
           EEEKE+    HSEKLA+AF LI  + AP+  + I KN+R+C  CH   K +S + + EI 
Sbjct: 666 EEEKEQALLAHSEKLAIAFGLI--NLAPNLPVHIRKNLRVCEDCHSAIKLISRLWNREII 723

Query: 848 LAD-SKCLHH 856
           + D S C+ H
Sbjct: 724 VRDRSSCVEH 733



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 191/422 (45%), Gaps = 43/422 (10%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D    T L+S  AK G L D + +      R++ +W+++I AYSR  R RE V  F  M+
Sbjct: 172 DAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTML 231

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             G+ PD+     +L AC    D E G+ +H LV + GM     +  +++ +Y KCG   
Sbjct: 232 SHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFG 291

Query: 210 WARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
            A++ F+++       +WN++I GY + G  D A  LFD+M   E++  ++TFN ++  Y
Sbjct: 292 HAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEM---EVR-DIITFNSMMTGY 347

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
                                                +G+  +AL LF  M    +  + 
Sbjct: 348 -----------------------------------IHSGQLREALLLFMSMRRHDLRVDN 372

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            T+ + ++AC  L AL  G  +H+   +     D+ +G +L++MY KC  ++ A  VF  
Sbjct: 373 FTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEATIVFQR 432

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           +  +DV++W +MIAG    G    A E F +M+     PN +++  +++    +   +E 
Sbjct: 433 MGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEG 492

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
              F  M     +      +  +I    + G  + A+ + + M      PN V   S+L 
Sbjct: 493 RLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMP---IQPNAVIWASILS 549

Query: 509 AC 510
           AC
Sbjct: 550 AC 551



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 97/416 (23%), Positives = 179/416 (43%), Gaps = 42/416 (10%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---------NLVT 87
           R  EA+    ++ + G      T I +L AC     + L R LH  +         NLV 
Sbjct: 219 RAREAVGCFKTMLSHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVV 278

Query: 88  E-IDVFVK-----------------------TKLLSVYAKCGCLDDAREVFEDMRERNLY 123
             ID++ K                         ++  Y K G +D AR +F++M  R++ 
Sbjct: 279 ALIDMYAKCGDFGHAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDII 338

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
           T+++M+  Y    + RE + LF  M +  L  D+F    +L AC + G  + G+ +H+ +
Sbjct: 339 TFNSMMTGYIHSGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACI 398

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
            +  +     +  ++L +Y+KCG++  A   F+ M ++D   W +MI+G    G    A 
Sbjct: 399 EQRLVEADIYLGTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAAL 458

Query: 244 RLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISG 302
             F +M  +  +   V++  ++ + +     +        M  L  I P +  + CMI  
Sbjct: 459 EHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDL 518

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
             ++G   +A+DL K M    + PN V   S +SAC   K + +        +K+   +D
Sbjct: 519 LGRSGLLDEAMDLVKTMP---IQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDED 575

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
             V   L N+Y    + E A ++  +++++ V       AGY      G+ ++  +
Sbjct: 576 G-VYVQLYNIYIDSRQWENASKIRMLMEERQVKK----TAGYSSITVAGQVHKFVV 626



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 80/145 (55%), Gaps = 1/145 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           +G+L EA+ +  S+     +V   T +NLL AC    ++   R LHA +   + E D+++
Sbjct: 350 SGQLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYL 409

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T LL +Y KCG +D+A  VF+ M +R+++TW+AMI   + +   +  +E F+ M  DG 
Sbjct: 410 GTALLDMYMKCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGF 469

Query: 154 FPDDFLFPKILQACGNCGDFEAGKL 178
            P+   +  +L AC +      G+L
Sbjct: 470 QPNSVSYIAVLTACSHSCLLNEGRL 494


>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/572 (33%), Positives = 311/572 (54%), Gaps = 63/572 (11%)

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           K G+++ ARR F+ M E D + W ++ISGY + G  +EA RLFD   R + K  VVT+  
Sbjct: 79  KDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFD---RVDAKKNVVTWTA 135

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           ++  Y +  +   A ++   M +     +V +W  MI G+AQNGR   A+ LF++M    
Sbjct: 136 MVGGYIRSNKISDAEKLFNEMPN----KNVVSWNTMIDGYAQNGRIDSAMYLFEKMP--- 188

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
                                                 +V+  N++++M ++C  +E A 
Sbjct: 189 ------------------------------------ERNVVSWNTVMSMLAQCGRIEEAR 212

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
           R+FD + ++DV SW +MIAG        +A +LF +M E D+P    +WN +I+G IQNG
Sbjct: 213 RLFDRMPERDVISWTAMIAGLLD-----EALDLFERMPERDLP----SWNTMITGLIQNG 263

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS-CFYPNCVT 502
           +   A  LF     N+  K+N  SW ++I G  Q G+   AL +F +M S+    PN  T
Sbjct: 264 DLRRARKLF-----NEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGT 318

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD-GM 561
            +SVL AC+ L    + +++H  + +   + S  V+++LI+ Y+K G +  +R +FD GM
Sbjct: 319 FVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGM 378

Query: 562 SS-KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           +S +D+++WN +I  Y  HG+   A++ F +M+  G KP+  T++ ++ A S AG+V+ G
Sbjct: 379 TSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEG 438

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
            K F  + +   I+   +HY+ ++DL GR+G+L+EA  FIE +  +P + +W ALL  C 
Sbjct: 439 LKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCN 498

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           +H N+ +   A ++L ++EP +     L+  IYA  GK  +A +VR   ++   +   G 
Sbjct: 499 VHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGC 558

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
            WIEV N V+ FV G  S S S L+YS L+++
Sbjct: 559 SWIEVGNRVHVFVVGDKSHSQSKLIYSLLRDL 590



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 220/440 (50%), Gaps = 33/440 (7%)

Query: 76  ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM-RERNLYTWSAMIGAYSR 134
           AR+L    + + E DV   T ++S Y KCG +++AR +F+ +  ++N+ TW+AM+G Y R
Sbjct: 86  ARRL---FDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIR 142

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
             +  +  +LF  M    +   + +           G  + G++  ++ +   M     V
Sbjct: 143 SNKISDAEKLFNEMPNKNVVSWNTMID---------GYAQNGRIDSAMYLFEKMPERNVV 193

Query: 195 R-NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
             N+V+++  +CG++  ARR F+ M E+D ++W +MI+G       DEA  LF++M   +
Sbjct: 194 SWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLL-----DEALDLFERMPERD 248

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
           +     ++N +I    Q G    A ++   M       +V +WT MI+G  Q G + +AL
Sbjct: 249 LP----SWNTMITGLIQNGDLRRARKLFNEMPK----KNVISWTTMITGCVQEGESEEAL 300

Query: 314 DLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
            +F  M S  G  PN  T  S + AC++L  L  G ++H +  K  + D   V ++LINM
Sbjct: 301 KIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINM 360

Query: 373 YSKCEELEAAERVFD--MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
           YSKC EL  A ++FD  M   +D+ SWN +IA Y   GY  +A   F +M++S   P+ +
Sbjct: 361 YSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDV 420

Query: 431 TWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
           T+  L+S     G  +E +  F  + K+  +      +  L+    + G+   A G   +
Sbjct: 421 TYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIER 480

Query: 491 MQSSCFYPNCVTILSVLPAC 510
           +++    P+     ++L  C
Sbjct: 481 LETK---PSARVWGALLAGC 497



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 116/516 (22%), Positives = 209/516 (40%), Gaps = 77/516 (14%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
           G + EA  + D +    AK    T+  ++   I SN I  A KL    N +   +V    
Sbjct: 112 GMIEEARRLFDRV---DAKKNVVTWTAMVGGYIRSNKISDAEKL---FNEMPNKNVVSWN 165

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            ++  YA+ G +D A  +FE M ERN+ +W+ ++   ++  R  E   LF  M +  +  
Sbjct: 166 TMIDGYAQNGRIDSAMYLFEKMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVIS 225

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
              +   +L         EA  L   +  +   S      N+++   ++ G L  AR+ F
Sbjct: 226 WTAMIAGLLD--------EALDLFERMPERDLPSW-----NTMITGLIQNGDLRRARKLF 272

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-------------------CREEIKL 256
             M +K+ ++W +MI+G  Q GE++EA ++F +M                   C     L
Sbjct: 273 NEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGL 332

Query: 257 G-----------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
           G                     + LI  Y++ G+   A +M    + +    D+ +W  +
Sbjct: 333 GEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFD--DGMTSQRDLVSWNGI 390

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I+ +A +G   +A++ FKEM   G  P+ VT    +SAC+    +  G++     VK   
Sbjct: 391 IAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVK--- 447

Query: 360 TDDVLVGNS----LINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIAGYCQAGYCGKAY 414
              +LV       L+++  +   L+ A    + ++ K     W +++AG           
Sbjct: 448 DRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHANVKIGK 507

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW------ 468
           +   K+ E + P N  T+ +L + Y   G   EA  +  +M      K+   SW      
Sbjct: 508 QAAKKLLEVE-PENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWIEVGNR 566

Query: 469 -NSLIAGYQQLGQKNNALGVFR----KMQSSCFYPN 499
            +  + G +   Q      + R    KM+ + + PN
Sbjct: 567 VHVFVVGDKSHSQSKLIYSLLRDLHSKMKKAGYEPN 602



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 121/270 (44%), Gaps = 36/270 (13%)

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
           N +I   +K G I+ +R +FD M   D+ITW ++I GY+  G    A  LFD++ +   K
Sbjct: 71  NWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDA---K 127

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
            N  T+ +++  +  +  +   +K+F  +         +  ++ MID Y ++G+++ AM 
Sbjct: 128 KNVVTWTAMVGGYIRSNKISDAEKLFNEMPN-----KNVVSWNTMIDGYAQNGRIDSAMY 182

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYA-ICG 717
             E MP E +   W  +++     G I+ A     RLFD  P     +R ++   A I G
Sbjct: 183 LFEKMP-ERNVVSWNTVMSMLAQCGRIEEA----RRLFDRMP-----ERDVISWTAMIAG 232

Query: 718 KPEDALKV--RKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP-E 774
             ++AL +  R  ER+    N              T +TG                +P +
Sbjct: 233 LLDEALDLFERMPERDLPSWN--------------TMITGLIQNGDLRRARKLFNEMPKK 278

Query: 775 NVTARSSHSGLCIEEEEKEEISGIHSEKLA 804
           NV + ++    C++E E EE   I S  L+
Sbjct: 279 NVISWTTMITGCVQEGESEEALKIFSRMLS 308


>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 640

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 190/584 (32%), Positives = 311/584 (53%), Gaps = 47/584 (8%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM-PNGVTITSAISACTDLKALAMGME 349
           PD+F    +I  +A +     A+  + EM+   V+ P+  T    + AC+++ +L +G  
Sbjct: 98  PDIFIANTLIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEA 157

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           IHS   K+G++ +V V N L+ MY+ C  +E+A  VFD   + D  SW            
Sbjct: 158 IHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASW------------ 205

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
                                  N++I GY++ G    A  +F+ M   D V     SW+
Sbjct: 206 -----------------------NIMIGGYLKCGVFKSARRMFEAMPDRDVV-----SWS 237

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
            +I GY Q  +    LG+F+ M      PN   +++ L ACA+L A  + + I   + R+
Sbjct: 238 VMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERK 297

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
           ++  ++ +  +LID Y+K G++  +  +F  M  K+++ W+++I G  ++G    AL+LF
Sbjct: 298 NVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLF 357

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            QM+  G+KPN  TF+ I+ A S + +VD G   F S+T  Y + P   H+  M+DLYGR
Sbjct: 358 SQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGR 417

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +G L++A   I+ MP +P+S+IW ALL ACRIHG+ +L     +RL +L+P       L+
Sbjct: 418 AGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHGGRYVLL 477

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             IYA CG+ +   ++R++ RE     + G  +I++ + ++ FV G  S    +++Y+ L
Sbjct: 478 SNIYAACGRWDRVAELRRMMRERQVSKTPGCSFIDLGDTIHEFVAGDSSHPQLEMIYAKL 537

Query: 770 QNVPENVTAR-----SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKN 824
             + + + A      +    L ++EEEKE     HSEKLA+AF LI +     TIRI KN
Sbjct: 538 GEMSQELKAAGYKPDTGQVLLDMDEEEKETALCHHSEKLAIAFGLIKTDPGT-TIRITKN 596

Query: 825 IRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +R+C  CH   K +S +++ EI + D    HHF++G CSC D+W
Sbjct: 597 LRVCADCHSATKLISKIYNREIIVRDRCRFHHFRDGSCSCMDFW 640



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 188/424 (44%), Gaps = 45/424 (10%)

Query: 90  DVFVKTKLLSVYA--KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           D FV +++LS  A    G +  AR +F  +R+ +++  + +I AY+      + V  +  
Sbjct: 66  DNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAFSPNPIDAVVFYSE 125

Query: 148 MVQDGL-FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M +  + FPD   FP +L+AC        G+ +HS V KLG S    V N ++ +Y  CG
Sbjct: 126 MTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCG 185

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            +  A   F+   E DG +WN MI GY + G                             
Sbjct: 186 LIESAGLVFDRTPECDGASWNIMIGGYLKCG----------------------------- 216

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
                       +  +RM       DV +W+ MI+G+ Q  R  + L LF++M    + P
Sbjct: 217 ----------VFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEP 266

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           N   + +A+SAC  L A+  G  I     +      V +G +LI+MYSKC  +E A  VF
Sbjct: 267 NESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVF 326

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
             +K+K+V +W++MI G    G    A  LF +M+   V PN +T+  +++    +   D
Sbjct: 327 HKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVD 386

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           E    F  M     +K N      ++  Y + G  + A  V + M    F PN     ++
Sbjct: 387 EGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMP---FKPNSAIWGAL 443

Query: 507 LPAC 510
           L AC
Sbjct: 444 LNAC 447



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 169/372 (45%), Gaps = 41/372 (11%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAF---LNLVTEID--------------------VFVK 94
           +T+  LL+AC +  S+ L   +H+    L   +E+                     VF +
Sbjct: 137 HTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDR 196

Query: 95  TK---------LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           T          ++  Y KCG    AR +FE M +R++ +WS MI  Y ++ R++E + LF
Sbjct: 197 TPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDVVSWSVMINGYVQESRFKEGLGLF 256

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M+ + + P++ +    L AC + G  E G+ +   + +  +    R+  +++ +Y KC
Sbjct: 257 QDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGTALIDMYSKC 316

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G +  A   F  M EK+ +AW++MI+G    G+  +A  LF +M  + +K   VTF  ++
Sbjct: 317 GSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKPNEVTFIGIL 376

Query: 266 RSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
            + +     D        M S+ G+ P+     CM+  + + G   QA  + K M F   
Sbjct: 377 NACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPF--- 433

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAA 382
            PN     + ++AC       +G ++    +++   D    G  ++  N+Y+ C   +  
Sbjct: 434 KPNSAIWGALLNACRIHGDTELGEQVGKRLLEL---DPNHGGRYVLLSNIYAACGRWDRV 490

Query: 383 ERVFDMIKDKDV 394
             +  M++++ V
Sbjct: 491 AELRRMMRERQV 502



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 116/257 (45%), Gaps = 4/257 (1%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKT 95
           R  E + +   +  +  +   +  +N L AC    ++   + +  ++      + V + T
Sbjct: 248 RFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERYMERKNVRLTVRLGT 307

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            L+ +Y+KCG ++ A EVF  M+E+N+  WSAMI   + + + ++ + LF  M   G+ P
Sbjct: 308 ALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLAINGQGKDALNLFSQMEMQGVKP 367

Query: 156 DDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           ++  F  IL AC +    + G    HS+    G+         ++ +Y + G L  A+  
Sbjct: 368 NEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTV 427

Query: 215 FESMDEKDGVA-WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            +SM  K   A W ++++     G+ +   ++  ++   +   G   + +L   Y   G+
Sbjct: 428 IKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHG-GRYVLLSNIYAACGR 486

Query: 274 CDVAMEMVKRMESLGIT 290
            D   E+ + M    ++
Sbjct: 487 WDRVAELRRMMRERQVS 503



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 53/289 (18%)

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM-QSSCFYPNCVTILSVLPA 509
           LF R+ K D    NT     LI  Y       +A+  + +M +SS  +P+  T   +L A
Sbjct: 91  LFYRIRKPDIFIANT-----LIRAYAFSPNPIDAVVFYSEMTESSVVFPDVHTFPLLLKA 145

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           C+ + +    + IH  V +    S + V N L+  YA  G I  +  +FD     D  +W
Sbjct: 146 CSEIPSLRLGEAIHSHVFKLGWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASW 205

Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
           N +I GY+  G + +A  +F+ M      P+R                            
Sbjct: 206 NIMIGGYLKCGVFKSARRMFEAM------PDRD--------------------------- 232

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLTACRIHGNID 686
                  +  +S MI+ Y +  + +E +   +DM    IEP+ S+    L+AC   G ++
Sbjct: 233 -------VVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAME 285

Query: 687 LAVLAIERLFDLEPGDVLIQ--RLILQIYAICGKPEDALKV-RKLEREN 732
                IER  + +   + ++    ++ +Y+ CG  E AL+V  K++ +N
Sbjct: 286 QGQW-IERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKN 333


>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
 gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
          Length = 588

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 181/555 (32%), Positives = 303/555 (54%), Gaps = 27/555 (4%)

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
           AI+ C + +AL  G ++H+  V  G+   + +   L+ MY++C  LE A  V D + +++
Sbjct: 41  AITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERN 100

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP---------------NVITWNVLISG 438
           V SW +MI+GY Q     +A+ELFI M  + +                 ++   + L+  
Sbjct: 101 VVSWTAMISGYSQNERPDQAWELFIMMLRAGIHQVKQVHAFAVKTNFELHMFVGSSLLDM 160

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
           Y ++ N  EA  +F  +   D V     S+ ++++GY QLG    AL +FR + +     
Sbjct: 161 YAKSENIQEARRVFDMLPARDVV-----SYTAILSGYTQLGLDEEALDLFRLLYNEGMQC 215

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           N VT  ++L A + L + +  K++HG +LRR L   + + NSLID Y+K G ++YSR +F
Sbjct: 216 NQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVF 275

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           D M  + +++WN+++ GY  HG  H  + LF  M    +KP+  T L+++  +S  G+VD
Sbjct: 276 DSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCD-EVKPDSVTLLAVLSGYSHGGLVD 334

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            G  +F  I +    +   EHY  +IDL GRSG+L++A+  IE MP +P  +IW +LL A
Sbjct: 335 EGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLIEKMPFQPTRAIWGSLLGA 394

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
           CR+H N+ +     ++L D+EP +     ++  IYA  G  +D  +VRKL  + T     
Sbjct: 395 CRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWKDVFRVRKLMLKKTVIKEP 454

Query: 739 GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKE 793
           G+ W+ +  +++TF +        + + + ++ +   + A      L      +++E+KE
Sbjct: 455 GRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIKAAGFVPDLSCVLHDVDDEQKE 514

Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
            +   HSEKLA+ F L+ S+ +  TI+++KN+R+CV CH  AK+VS ++  EI L D   
Sbjct: 515 RMLLGHSEKLAITFGLM-STPSDLTIQVMKNLRICVDCHNFAKFVSKVYGREISLRDKNR 573

Query: 854 LHHFKNGQCSCGDYW 868
            H    G C+CGDYW
Sbjct: 574 FHLITEGACTCGDYW 588



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 176/346 (50%), Gaps = 15/346 (4%)

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G+ +H+ ++  G      +   ++ +Y +CG L  AR   + M E++ V+W +MISGY Q
Sbjct: 54  GRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGMPERNVVSWTAMISGYSQ 113

Query: 236 IGENDEAHRLFDKMCR------EEIKLGVVTFNILIRSYNQLGQCDV-----AMEMVKRM 284
               D+A  LF  M R      +++    V  N  +  +      D+      ++  +R+
Sbjct: 114 NERPDQAWELFIMMLRAGIHQVKQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRV 173

Query: 285 ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
             +    DV ++T ++SG+ Q G   +ALDLF+ +   G+  N VT T+ ++A + L ++
Sbjct: 174 FDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSM 233

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
             G ++H L ++      + + NSLI+MYSKC +L  + RVFD + ++ V SWN+M+ GY
Sbjct: 234 DYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGY 293

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
            + G   +  +LF  M + +V P+ +T   ++SGY   G  DE +D+F  + K      N
Sbjct: 294 GRHGLAHEVVQLFRSMCD-EVKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLN 352

Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           T  +  +I    + GQ   AL +  KM    F P      S+L AC
Sbjct: 353 TEHYGCVIDLLGRSGQLQKALNLIEKMP---FQPTRAIWGSLLGAC 395



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 155/284 (54%), Gaps = 17/284 (5%)

Query: 60  YINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           +I +L+A      IH  +++HAF +    E+ +FV + LL +YAK   + +AR VF+ + 
Sbjct: 124 FIMMLRA-----GIHQVKQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLP 178

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
            R++ +++A++  Y++     E ++LF L+  +G+  +   F  +L A       + GK 
Sbjct: 179 ARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQ 238

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H L+++  +     ++NS++ +Y KCGKL+++RR F+SM E+  V+WN+M+ GY + G 
Sbjct: 239 VHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGL 298

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM----VKRMESLGITPDVF 294
             E  +LF  MC +E+K   VT   ++  Y+  G  D  ++M    VK   +L  T    
Sbjct: 299 AHEVVQLFRSMC-DEVKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEH-- 355

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
            + C+I    ++G+  +AL+L ++M F    P      S + AC
Sbjct: 356 -YGCVIDLLGRSGQLQKALNLIEKMPF---QPTRAIWGSLLGAC 395



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 103/451 (22%), Positives = 203/451 (45%), Gaps = 64/451 (14%)

Query: 56  RRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVF 114
           R + Y + +  C++  ++   R++HA +        +++ T+L+ +YA+CG L+DAR V 
Sbjct: 34  RFHDYDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVL 93

Query: 115 EDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE 174
           + M ERN+ +W+AMI  YS+++R  +  ELF +M++ G+                     
Sbjct: 94  DGMPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGI--------------------H 133

Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
             K +H+  +K        V +S+L +Y K   +  ARR F+ +  +D V++ +++SGY 
Sbjct: 134 QVKQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYT 193

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA----------------- 277
           Q+G ++EA  LF  +  E ++   VTF  L+ + + L   D                   
Sbjct: 194 QLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMA 253

Query: 278 -----MEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVG 323
                ++M  +   L  +  VF         +W  M+ G+ ++G   + + LF+ M    
Sbjct: 254 LQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSMC-DE 312

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS----LINMYSKCEEL 379
           V P+ VT+ + +S  +    +  G+++    VK       L+       +I++  +  +L
Sbjct: 313 VKPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVK---EQSTLLNTEHYGCVIDLLGRSGQL 369

Query: 380 EAAERVFDMIKDKDVYS-WNSMIAGYCQAGYCGKAYELFIKMQESDV-PPNVITWNVLIS 437
           + A  + + +  +   + W S++ G C+        E F+  +  D+ P N   + +L +
Sbjct: 370 QKALNLIEKMPFQPTRAIWGSLL-GACRVHTNVHVGE-FVAQKLLDIEPENAGNYVILSN 427

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
            Y   G   +   + + M K   +K    SW
Sbjct: 428 IYAAAGMWKDVFRVRKLMLKKTVIKEPGRSW 458


>gi|125524780|gb|EAY72894.1| hypothetical protein OsI_00769 [Oryza sativa Indica Group]
          Length = 569

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 188/534 (35%), Positives = 277/534 (51%), Gaps = 48/534 (8%)

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--NILIRSYNQLGQCDVAMEMVKRMES 286
           +++ Y ++G   +A R+FD M       G  TF  N LI +Y+     D A +   RM +
Sbjct: 49  ILAAYSRLGRAADARRVFDAM-----PPGRTTFHWNALISAYSSGCDPDAARDAFARMAA 103

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT---DLKA 343
            G  PD  TWT ++S  A++G+ +  L LF EM   G   N  ++  A+SAC    DL A
Sbjct: 104 AGTRPDAVTWTALLSAHARSGKHADVLQLFGEMQRSGCEGNAESMAVALSACPYAGDL-A 162

Query: 344 LAMGMEIHSLAVKMGFTDDVL-VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           LA G  IH   V  G     L V NSLI MY K  E++ A++ F     K          
Sbjct: 163 LAKGKAIHGCGVVKGLMHGYLFVTNSLICMYGKLGEMDDAKKAFRDATAK---------- 212

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGK-NDKV 461
                                    N +TWN LI+ Y   G  DEA+D+  +M +    V
Sbjct: 213 -------------------------NTVTWNTLITSYAAAGLCDEALDVLAQMEQIGGTV 247

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
             N  SW+++I G+   G  + AL +FR+MQ     PN VT+ +VL AC  L+A    +E
Sbjct: 248 APNVVSWSAVIGGFASSGDTDRALELFRRMQQQWLSPNVVTMATVLSACVDLLALRLGRE 307

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           +HG  ++  L+    V N LI+ YAK G +  +R +FDGM ++D+I+WNS++ GY +HG 
Sbjct: 308 LHGHAMKAELDRHSLVENGLINMYAKCGKVSGARKVFDGMKTRDLISWNSMLAGYGMHGL 367

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
              AL LF  M    ++P+  TF++++ A   AG V  G+++F  +   ++I P +EHY+
Sbjct: 368 CDEALALFTDMAGATVEPDGVTFVAVLSACGHAGRVTEGRRLFDRMVRAHKISPSMEHYT 427

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            M+ L GR+G L +A E +E MP+ PD  +W ALL +CRIHG+  +A   I  +   E  
Sbjct: 428 CMVYLLGRAGLLRDASELVETMPVRPDLCVWGALLNSCRIHGDAAMAEATIANVLQSEDQ 487

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
                 LI  +YA+CG  +++ KVR + +E   R + GQ WIEV N V  F  G
Sbjct: 488 STGNHMLITNLYAMCGMWDESKKVRVMTKEAGLRKNPGQSWIEVDNKVVAFAAG 541



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/433 (31%), Positives = 214/433 (49%), Gaps = 30/433 (6%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           N+Y  L  A   + S  +A  +HA  L+L       V  ++L+ Y++ G   DAR VF+ 
Sbjct: 10  NSY-TLPLALRAAASPRVASAVHAHALHLGLHAQHDVAGQILAAYSRLGRAADARRVFDA 68

Query: 117 MRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
           M   R  + W+A+I AYS         + F  M   G  PD   +  +L A    G    
Sbjct: 69  MPPGRTTFHWNALISAYSSGCDPDAARDAFARMAAAGTRPDAVTWTALLSAHARSGK--- 125

Query: 176 GKLMHSLVIKL-----GMSCVRRVRNSVLAV---------YVKCGKLIWARRFFESMDEK 221
               H+ V++L        C     +  +A+          +  GK I      + +   
Sbjct: 126 ----HADVLQLFGEMQRSGCEGNAESMAVALSACPYAGDLALAKGKAIHGCGVVKGLMHG 181

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMV 281
                NS+I  Y ++GE D+A + F    R+      VT+N LI SY   G CD A++++
Sbjct: 182 YLFVTNSLICMYGKLGEMDDAKKAF----RDATAKNTVTWNTLITSYAAAGLCDEALDVL 237

Query: 282 KRMESLG--ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
            +ME +G  + P+V +W+ +I GFA +G T +AL+LF+ M    + PN VT+ + +SAC 
Sbjct: 238 AQMEQIGGTVAPNVVSWSAVIGGFASSGDTDRALELFRRMQQQWLSPNVVTMATVLSACV 297

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           DL AL +G E+H  A+K       LV N LINMY+KC ++  A +VFD +K +D+ SWNS
Sbjct: 298 DLLALRLGRELHGHAMKAELDRHSLVENGLINMYAKCGKVSGARKVFDGMKTRDLISWNS 357

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           M+AGY   G C +A  LF  M  + V P+ +T+  ++S     G   E   LF RM +  
Sbjct: 358 MLAGYGMHGLCDEALALFTDMAGATVEPDGVTFVAVLSACGHAGRVTEGRRLFDRMVRAH 417

Query: 460 KVKRNTASWNSLI 472
           K+  +   +  ++
Sbjct: 418 KISPSMEHYTCMV 430



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 163/415 (39%), Gaps = 91/415 (21%)

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
            +PN  T+  A+ A    +   +   +H+ A+ +G      V   ++  YS+      A 
Sbjct: 7   ALPNSYTLPLALRAAASPR---VASAVHAHALHLGLHAQHDVAGQILAAYSRLGRAADAR 63

Query: 384 RVFD-MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQN 442
           RVFD M   +  + WN++I+ Y        A + F +M  +   P+ +TW  L+S + ++
Sbjct: 64  RVFDAMPPGRTTFHWNALISAYSSGCDPDAARDAFARMAAAGTRPDAVTWTALLSAHARS 123

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G   + + LF                                     +MQ S    N  +
Sbjct: 124 GKHADVLQLFG------------------------------------EMQRSGCEGNAES 147

Query: 503 ILSVLPACAYL--VASNKVKEIHGC-VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
           +   L AC Y   +A  K K IHGC V++  +   L V NSLI  Y K G +  ++  F 
Sbjct: 148 MAVALSACPYAGDLALAKGKAIHGCGVVKGLMHGYLFVTNSLICMYGKLGEMDDAKKAFR 207

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
             ++K+ +TWN+LI  Y   G    ALD+  QM+  G     GT                
Sbjct: 208 DATAKNTVTWNTLITSYAAAGLCDEALDVLAQMEQIG-----GT---------------- 246

Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP---IEPDSSIWEALL 676
                        + P +  +SA+I  +  SG  + A+E    M    + P+      +L
Sbjct: 247 -------------VAPNVVSWSAVIGGFASSGDTDRALELFRRMQQQWLSPNVVTMATVL 293

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDV------LIQRLILQIYAICGKPEDALKV 725
           +AC     +DL  L + R               L++  ++ +YA CGK   A KV
Sbjct: 294 SAC-----VDLLALRLGRELHGHAMKAELDRHSLVENGLINMYAKCGKVSGARKV 343



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 144/304 (47%), Gaps = 15/304 (4%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRE------RNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           L++ YA  G  D+A +V   M +       N+ +WSA+IG ++        +ELF  M Q
Sbjct: 220 LITSYAAAGLCDEALDVLAQMEQIGGTVAPNVVSWSAVIGGFASSGDTDRALELFRRMQQ 279

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
             L P+      +L AC +      G+ +H   +K  +     V N ++ +Y KCGK+  
Sbjct: 280 QWLSPNVVTMATVLSACVDLLALRLGRELHGHAMKAELDRHSLVENGLINMYAKCGKVSG 339

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           AR+ F+ M  +D ++WNSM++GY   G  DEA  LF  M    ++   VTF  ++ +   
Sbjct: 340 ARKVFDGMKTRDLISWNSMLAGYGMHGLCDEALALFTDMAGATVEPDGVTFVAVLSACGH 399

Query: 271 LGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G+      +  RM  +  I+P +  +TCM+    + G    A +L + M    V P+  
Sbjct: 400 AGRVTEGRRLFDRMVRAHKISPSMEHYTCMVYLLGRAGLLRDASELVETMP---VRPDLC 456

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFD 387
              + +++C      AM     +  ++   ++D   GN ++  N+Y+ C   + +++V  
Sbjct: 457 VWGALLNSCRIHGDAAMAEATIANVLQ---SEDQSTGNHMLITNLYAMCGMWDESKKVRV 513

Query: 388 MIKD 391
           M K+
Sbjct: 514 MTKE 517


>gi|147841850|emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
          Length = 761

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 199/632 (31%), Positives = 337/632 (53%), Gaps = 58/632 (9%)

Query: 79  LHAFLNLVTE------IDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY 132
           LH F++ + +      +D++   K +S   + G +++AR +F+ M +RN+ TW++MI  Y
Sbjct: 49  LHCFVSTLQQPKNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGY 108

Query: 133 SRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR 192
            R +   +  +LF  M    +   + +    +   G     E G+ +   + +    CV 
Sbjct: 109 VRRREMAKARKLFDEMPDRDVVSWNLMISGYVSCRGRW--VEEGRHLFDEMPE--RDCVS 164

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
              N++++ Y + G++  A + F+SM E++ V+WN+M++G+ Q G+ + A   F +M   
Sbjct: 165 W--NTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPER 222

Query: 253 EIKLGVVTFNILIRSYNQLGQCDVAME--MVKRMESLGITPDVFTWTCMISGFAQNGRTS 310
           +      + + L+    Q G+ D A    +  R +       V  +  +++G+ QNGR  
Sbjct: 223 D----SASLSALVAGLIQNGELDEAKRILLTTRRQDDDKGDLVHAYNILLAGYGQNGRVD 278

Query: 311 QALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL 369
           +A  LF ++ F  G   +G                              F  +V+  NS+
Sbjct: 279 KARQLFDQIPFYDGGQKDGGR----------------------------FERNVVSWNSM 310

Query: 370 INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           I  Y K  ++ +A  +FD +K++D  SWN+MI+GY +     +A+ LF +M      P+ 
Sbjct: 311 IMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPN----PDT 366

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
           +TWN +ISG+ Q GN + A  LF  +      ++N  SWNS+IAGY+  G    A  ++R
Sbjct: 367 LTWNSMISGFAQKGNLELARALFATI-----PQKNLVSWNSMIAGYENNGDYKGATELYR 421

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           +M      P+  T+ SVL  C+   A +   +IH  + + ++   +P+ NSLI  Y++ G
Sbjct: 422 QMLLQGEKPDRHTLSSVLSVCSGFAALHLGMQIHQQITK-TVIPDIPINNSLITMYSRCG 480

Query: 550 NIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
            IV +RTIFD +   K++I+WN++I GY  HGF   AL+LF+ MK   ++P   TF+S++
Sbjct: 481 AIVEARTIFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVRPTYITFISVL 540

Query: 609 LAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
            A + AG V  G+  F S+   + I P IEH+++++D+ GR G+LEEAM+ I  MP EPD
Sbjct: 541 NACAHAGXVKEGRMHFKSMACEFGIEPRIEHFASLVDIVGRHGQLEEAMDLINSMPFEPD 600

Query: 669 SSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
            ++W ALL ACR+H N++LA +A E L  LEP
Sbjct: 601 KAVWGALLGACRVHNNVELARVAAEALMKLEP 632



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 158/613 (25%), Positives = 263/613 (42%), Gaps = 110/613 (17%)

Query: 6   LTTFQQL-HSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRN--TYIN 62
           ++T QQ  +S+      P  R +HL     NGR+NEA  + D++       +RN  T+ +
Sbjct: 53  VSTLQQPKNSVSLDLYTPNKRISHL---IRNGRINEARALFDAMP------QRNIVTWNS 103

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGC--LDDAREVFEDMRER 120
           ++   +    +  ARKL    + + + DV     ++S Y  C    +++ R +F++M ER
Sbjct: 104 MITGYVRRREMAKARKL---FDEMPDRDVVSWNLMISGYVSCRGRWVEEGRHLFDEMPER 160

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG---- 176
           +  +W+ MI  Y+R  R  E ++LF  M +  +   + +    LQ     GD E      
Sbjct: 161 DCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQN----GDVERAIEFF 216

Query: 177 ------------KLMHSLVIKLGMSCVRRV-----------------RNSVLAVYVKCGK 207
                        L+  L+    +   +R+                  N +LA Y + G+
Sbjct: 217 MRMPERDSASLSALVAGLIQNGELDEAKRILLTTRRQDDDKGDLVHAYNILLAGYGQNGR 276

Query: 208 LIWARRFFESMD-----EKDG-------VAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           +  AR+ F+ +      +KDG       V+WNSMI  Y +  +   A  LFD+M   +  
Sbjct: 277 VDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKERD-- 334

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ---------- 305
              +++N +I  Y ++   + A  + + M +    PD  TW  MISGFAQ          
Sbjct: 335 --TISWNTMISGYVRMSDMEEAWMLFQEMPN----PDTLTWNSMISGFAQKGNLELARAL 388

Query: 306 ---------------------NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
                                NG    A +L+++M   G  P+  T++S +S C+   AL
Sbjct: 389 FATIPQKNLVSWNSMIAGYENNGDYKGATELYRQMLLQGEKPDRHTLSSVLSVCSGFAAL 448

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAG 403
            +GM+IH    K     D+ + NSLI MYS+C  +  A  +FD +K  K+V SWN+MI G
Sbjct: 449 HLGMQIHQQITKT-VIPDIPINNSLITMYSRCGAIVEARTIFDEVKLQKEVISWNAMIGG 507

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
           Y   G+   A ELF  M+   V P  IT+  +++     G   E    F+ M     ++ 
Sbjct: 508 YAFHGFAADALELFELMKRLKVRPTYITFISVLNACAHAGXVKEGRMHFKSMACEFGIEP 567

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
               + SL+    + GQ   A+ +   M    F P+     ++L AC         +   
Sbjct: 568 RIEHFASLVDIVGRHGQLEEAMDLINSMP---FEPDKAVWGALLGACRVHNNVELARVAA 624

Query: 524 GCVLRRSLESSLP 536
             +++   ESS P
Sbjct: 625 EALMKLEPESSAP 637


>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
 gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 620

 Score =  323 bits (827), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 199/587 (33%), Positives = 300/587 (51%), Gaps = 53/587 (9%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           PD F W  MI GF+ +    ++L L++ M       N  T  S + AC++L A     +I
Sbjct: 78  PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H+   K+G+ +DV   NSLIN Y+     + A  +FD I + D  SWNS+I GY +AG  
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
             A  LF KM E     N I+W  +ISGY+Q     EA+ LF  M               
Sbjct: 198 DIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEM--------------- 238

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
                                Q+S   P+ V++ + L ACA L A  + K IH  + +  
Sbjct: 239 ---------------------QNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTR 277

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           +     +   LID YAK G +  +  +F  +  K +  W +LI GY  HG    A+  F 
Sbjct: 278 IRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFM 337

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           +M+  G+KPN  TF +++ A S  G+V+ GK +F S+   Y + P IEHY  ++DL GR+
Sbjct: 338 EMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRA 397

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP--GDVLIQRL 708
           G L+EA  FI++MP++P++ IW ALL ACRIH NI+L     E L  ++P  G   + + 
Sbjct: 398 GLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHK- 456

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS- 767
              I+A+  K + A + R+L +E       G   I ++   + F+ G  S    + + S 
Sbjct: 457 -ANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSK 515

Query: 768 W---LQNVPENVTARSSHSGL--CIEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRI 821
           W    + + EN         L   ++++E+E I   HSEKLA+ + LI +   P T IRI
Sbjct: 516 WRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTK--PGTIIRI 573

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +KN+R+C  CH+  K +S ++  +I + D    HHF++G+CSCGDYW
Sbjct: 574 MKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 196/424 (46%), Gaps = 45/424 (10%)

Query: 90  DVFVKTKLLSV---YAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
           D +  TK LS          L  A+ VF+     + + W+ MI  +S        + L+ 
Sbjct: 45  DSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQ 104

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M+      + + FP +L+AC N   FE    +H+ + KLG                   
Sbjct: 105 RMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGY------------------ 146

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
                        E D  A NS+I+ Y   G    AH LFD++   +     V++N +I+
Sbjct: 147 -------------ENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPD----DVSWNSVIK 189

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            Y + G+ D+A+ + ++M       +  +WT MISG+ Q     +AL LF EM    V P
Sbjct: 190 GYVKAGKMDIALTLFRKMAE----KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           + V++ +A+SAC  L AL  G  IHS   K     D ++G  LI+MY+KC E+E A  VF
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
             IK K V +W ++I+GY   G+  +A   F++MQ+  + PNVIT+  +++     G  +
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           E   +F  M ++  +K     +  ++    + G  + A    R +Q     PN V   ++
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAK---RFIQEMPLKPNAVIWGAL 422

Query: 507 LPAC 510
           L AC
Sbjct: 423 LKAC 426



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 127/277 (45%), Gaps = 4/277 (1%)

Query: 80  HAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
           H   + + E D      ++  Y K G +D A  +F  M E+N  +W+ MI  Y +    +
Sbjct: 170 HLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNK 229

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E ++LF  M    + PD+      L AC   G  E GK +HS + K  +     +   ++
Sbjct: 230 EALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLI 289

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +Y KCG++  A   F+++ +K   AW ++ISGY   G   EA   F +M +  IK  V+
Sbjct: 290 DMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVI 349

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
           TF  ++ + +  G  +    +   ME    + P +  + C++    + G   +A    +E
Sbjct: 350 TFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQE 409

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           M    + PN V   + + AC   K + +G EI  + +
Sbjct: 410 MP---LKPNAVIWGALLKACRIHKNIELGEEIGEILI 443



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 97/197 (49%), Gaps = 3/197 (1%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTKL 97
            EA+ +   +     +    +  N L AC    ++   + +H++LN     +D  +   L
Sbjct: 229 KEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVL 288

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           + +YAKCG +++A EVF++++++++  W+A+I  Y+     RE +  F  M + G+ P+ 
Sbjct: 289 IDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNV 348

Query: 158 FLFPKILQACGNCGDFEAGKLM-HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
             F  +L AC   G  E GKL+ +S+     +         ++ +  + G L  A+RF +
Sbjct: 349 ITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQ 408

Query: 217 SMDEK-DGVAWNSMISG 232
            M  K + V W +++  
Sbjct: 409 EMPLKPNAVIWGALLKA 425



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 86/201 (42%), Gaps = 10/201 (4%)

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID---TYAKSGNIVYSR 555
           N    +S L  C+      ++K+IH  +L+  L      +   +    +   S  + Y++
Sbjct: 13  NLYETMSCLQRCS---KQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQ 69

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            +FDG    D   WN +I G+        +L L+ +M       N  TF S++ A S   
Sbjct: 70  IVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLS 129

Query: 616 MVDLGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
             +   ++   IT+  Y+    +   +++I+ Y  +G  + A    + +P EPD   W +
Sbjct: 130 AFEETTQIHAQITKLGYE--NDVYAVNSLINSYAVTGNFKLAHLLFDRIP-EPDDVSWNS 186

Query: 675 LLTACRIHGNIDLAVLAIERL 695
           ++      G +D+A+    ++
Sbjct: 187 VIKGYVKAGKMDIALTLFRKM 207


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  323 bits (827), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 202/658 (30%), Positives = 333/658 (50%), Gaps = 52/658 (7%)

Query: 253 EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
           E  L V     L+ +Y + G    A ++   M        V TW  MIS ++ + R+ +A
Sbjct: 40  EHSLDVFVNTALVNTYTKCGSLTDARKVFDGMP----CRSVGTWNSMISAYSISERSGEA 95

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
             +F+ M   G   + VT  S + AC + + L  G  +     +  F  D+ VG +LI M
Sbjct: 96  FFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFELDLFVGTALITM 155

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y++C   E A +VF  +K K++ +W+++I  +   G+CG+A   F  MQ+  + PN +T+
Sbjct: 156 YARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTF 215

Query: 433 NVLISGYI----------------QNGNEDEA------VDLFQR--MGKNDKVK------ 462
             L++G+                 ++G +D        V+++ R   G+ D  +      
Sbjct: 216 ISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEM 275

Query: 463 --RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
             +   +WN LI GY   G+   AL  ++++Q      + VT +SVL AC    +  + K
Sbjct: 276 DEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGK 335

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
            IH   +   L+S + V N+L + Y+K G++  +R IFD M  +  ++WN ++  Y  HG
Sbjct: 336 MIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHG 395

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
                L L  +M+  G+K N  TF+S++ + S AG++  G + F S+     I    EHY
Sbjct: 396 ESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHY 455

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
             ++DL GR+GKL+EA ++I  MP EP+   W +LL ACR+H ++D   LA  +L +L+P
Sbjct: 456 GCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDP 515

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
           G+     ++  IY+  G  ++A K+R+       +   G   I+VKN V+ F     S  
Sbjct: 516 GNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHP 575

Query: 761 YSDLLYSWLQN----------VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALI 810
            +  +Y  ++           VP+  T    H    ++EE+KE +   HSEKLA+AF LI
Sbjct: 576 RAAEIYDKVEELCFAMREAGYVPD--TKMVLHD---VDEEQKESLLAYHSEKLAIAFGLI 630

Query: 811 GSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            S+    ++ I KN+R+C  CH   K++S +   EI + D+   HHF++G CSC DYW
Sbjct: 631 -STPEKSSLHIFKNLRVCEDCHTATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 238/498 (47%), Gaps = 45/498 (9%)

Query: 51  QGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTE-IDVFVKTKLLSVYAKCGCLDD 109
           +G K    T++N+L + +D +++   + +H+ +      +DVFV T L++ Y KCG L D
Sbjct: 4   EGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTD 63

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
           AR+VF+ M  R++ TW++MI AYS  +R  E   +F  M  +G   D   F  IL AC N
Sbjct: 64  ARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVN 123

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
             + + GK +   + +        V  +++ +Y +C     A + F  M +K+ + W+++
Sbjct: 124 PENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAI 183

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------------------------- 261
           I+ +   G   EA R F  M +E I    VTF                            
Sbjct: 184 ITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGL 243

Query: 262 -------NILIRSYN--QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
                  N L+  Y   + G+ DVA  +++ M+   IT     W  +I+G+  +GR+ +A
Sbjct: 244 DDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQIT----AWNVLINGYTLHGRSREA 299

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
           L+ ++ +    +  + VT  S ++ACT   +LA G  IHS AV+ G   DV+V N+L NM
Sbjct: 300 LETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNM 359

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           YSKC  +E A R+FD +  +   SWN M+  Y Q G   +  +L  KM++  V  N IT+
Sbjct: 360 YSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITF 419

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
             ++S     G   E    F  +G +  ++  T  +  L+    + G+   A     KM 
Sbjct: 420 VSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMP 479

Query: 493 SSCFYPNCVTILSVLPAC 510
           S    P  VT  S+L AC
Sbjct: 480 SE---PEIVTWASLLGAC 494



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 126/507 (24%), Positives = 211/507 (41%), Gaps = 85/507 (16%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M+ +G+  +   F  +L +  +      GK +HS V +   S    V  +++  Y KCG 
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------ 261
           L  AR+ F+ M  +    WNSMIS Y     + EA  +F +M  E  +   VTF      
Sbjct: 61  LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120

Query: 262 -----------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
                                          LI  Y +    + A ++  RM+      +
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQ----KN 176

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           + TW+ +I+ FA +G   +AL  F+ M   G++PN VT  S ++  T    L     IH 
Sbjct: 177 LITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHL 236

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCE--ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           L  + G  D   + N+L+N+Y +CE  EL+ AE +   + ++ + +WN +I GY   G  
Sbjct: 237 LITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRS 296

Query: 411 GKAYELFIKMQESDVP-----------------------------------PNVITWNVL 435
            +A E + ++Q   +P                                    +VI  N L
Sbjct: 297 REALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNAL 356

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
            + Y + G+ + A  +F  M       R+  SWN ++  Y Q G+    L + RKM+   
Sbjct: 357 TNMYSKCGSMENARRIFDSMP-----IRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEG 411

Query: 496 FYPNCVTILSVLPACAY--LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
              N +T +SVL +C++  L+A    +  H     R +E        L+D   ++G +  
Sbjct: 412 VKLNGITFVSVLSSCSHAGLIAEG-CQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQE 470

Query: 554 SRTIFDGMSSK-DIITWNSLICGYVLH 579
           +      M S+ +I+TW SL+    +H
Sbjct: 471 AEKYISKMPSEPEIVTWASLLGACRVH 497



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 154/323 (47%), Gaps = 19/323 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTE--ID-- 90
           +G   EA+     +  +G    R T+I+LL      + +    ++H    L+TE  +D  
Sbjct: 190 HGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHL---LITEHGLDDT 246

Query: 91  VFVKTKLLSVYAKC--GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
             +   L++VY +C  G LD A  + ++M E+ +  W+ +I  Y+   R RE +E +  +
Sbjct: 247 TTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRL 306

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
             + +  D   F  +L AC +      GK++HS  ++ G+     V+N++  +Y KCG +
Sbjct: 307 QLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSM 366

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             ARR F+SM  +  V+WN M+  Y Q GE++E  +L  KM +E +KL  +TF  ++ S 
Sbjct: 367 ENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSC 426

Query: 269 NQLGQCDVAMEMVKRMESL----GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
           +  G   +  E  +   SL    GI      + C++    + G+  +A     +M     
Sbjct: 427 SHAG---LIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMP---S 480

Query: 325 MPNGVTITSAISACTDLKALAMG 347
            P  VT  S + AC   K L  G
Sbjct: 481 EPEIVTWASLLGACRVHKDLDRG 503



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/188 (33%), Positives = 96/188 (51%), Gaps = 6/188 (3%)

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM--NSLIDTYAKSGNIVYSRT 556
           N +T L+VL +     A  K K IH CV  R  E SL V    +L++TY K G++  +R 
Sbjct: 9   NVITFLNVLNSVVDPDALRKGKFIHSCV--RESEHSLDVFVNTALVNTYTKCGSLTDARK 66

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           +FDGM  + + TWNS+I  Y +      A  +F +M+  G + +R TFLSI+ A      
Sbjct: 67  VFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPEN 126

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           +  GK V  SI+E    + +    +A+I +Y R    E A +    M  + +   W A++
Sbjct: 127 LQHGKHVRESISETSFELDLFVG-TALITMYARCRSPENAAQVFGRMK-QKNLITWSAII 184

Query: 677 TACRIHGN 684
           TA   HG+
Sbjct: 185 TAFADHGH 192


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  323 bits (827), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 203/660 (30%), Positives = 335/660 (50%), Gaps = 85/660 (12%)

Query: 292  DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT-DLKALAMGMEI 350
            DVF+WT +ISGFA+ G ++  L LF +M   GV PN  T++  + +C+ ++    +G  I
Sbjct: 351  DVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGI 410

Query: 351  HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
            H   ++ G   D ++ NS+++ Y KC     AE++F ++ +KD  SWN M++ Y Q G  
Sbjct: 411  HGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDM 470

Query: 411  GK-------------------------------AYELFIKMQESDVPPNVITWN------ 433
             K                               A EL  KM  +    N +T++      
Sbjct: 471  QKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLA 530

Query: 434  --------------------VLISGYIQN---------GNEDEAVDLFQRMGKN------ 458
                                VL  G+++N         G  ++A  +F+ + +       
Sbjct: 531  SSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNS 590

Query: 459  ----DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV 514
                D     + SW+S+++GY Q G+  +AL  F  M  S    +  T+ SV+ ACA   
Sbjct: 591  EESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAG 650

Query: 515  ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
                 +++HG + +      + + +S+ID Y K G++  +  IF+    ++++ W S+I 
Sbjct: 651  VLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMIS 710

Query: 575  GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
            G  LHG    A+ LF+ M + G+ PN  +F+ ++ A S AG+++ G K F  + E Y I 
Sbjct: 711  GCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIR 770

Query: 635  PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER 694
            P  EH++ M+DLYGR+G+L E  EFI +  I   SS+W + L++CR+H NI++ +   ++
Sbjct: 771  PGAEHFTCMVDLYGRAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKK 830

Query: 695  LFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
            L +LEP D     L   I A   + E+A K+R L ++   + +  Q WI++KN V++FV 
Sbjct: 831  LLELEPFDAGPYILFSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVM 890

Query: 755  GGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFAL 809
            G  S      +YS+L  +   +      + +      +E+E+++ + G HSEKLA+A+ +
Sbjct: 891  GDRSHPQDTKIYSYLDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGI 950

Query: 810  IGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            I  S AP T IR++KN+R+C+ CH   KY S +   EI + D    HHFK+G CSC DYW
Sbjct: 951  I--STAPGTPIRVMKNLRVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 207/462 (44%), Gaps = 85/462 (18%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           LL++YAK   L+ A ++FE++ + ++++W+ +I  ++R     +V+ LF  M   G+ P+
Sbjct: 327 LLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGVCPN 386

Query: 157 DFLFPKILQACG-NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
            F    +L++C  N  D   GK +H  +++ G+     + NS+L  YVKC    +A + F
Sbjct: 387 QFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAEKLF 446

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
             M EKD V+WN                                   I++ SY Q+G   
Sbjct: 447 GLMAEKDTVSWN-----------------------------------IMMSSYLQIGDMQ 471

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            ++++ +++       D  +W  MI G  +NG    AL+L  +M   G   N +T + A+
Sbjct: 472 KSVDLFRQLPG----KDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIAL 527

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK--- 392
              + L  L +G +IH+  +K+G  DD  V NSLI+MY KC E+E A  +F  +  +   
Sbjct: 528 VLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSM 587

Query: 393 ------------DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS--- 437
                       +  SW+SM++GY Q G    A + F  M  S V  +  T   ++S   
Sbjct: 588 MNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACA 647

Query: 438 ------------GYIQNGNE-------DEAVDLFQRMGK--------NDKVKRNTASWNS 470
                       GYIQ              +D++ + G         N    RN   W S
Sbjct: 648 SAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTS 707

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
           +I+G    GQ   A+ +F  M +    PN V+ + VL AC++
Sbjct: 708 MISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSH 749



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 184/410 (44%), Gaps = 83/410 (20%)

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
           GN L+N+Y+K + LE A ++F+ I   DV+SW  +I+G+ + G       LF KMQ+  V
Sbjct: 324 GNHLLNLYAKSQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGV 383

Query: 426 PPNVITWNVL----------------ISGYI-QNGNEDEAV------------------- 449
            PN  T +++                I G+I +NG + +AV                   
Sbjct: 384 CPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCRCFGYAE 443

Query: 450 DLFQRMGKNDKVK--------------------------RNTASWNSLIAGYQQLGQKNN 483
            LF  M + D V                           ++ ASWN++I G  + G +  
Sbjct: 444 KLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERV 503

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID 543
           AL +  KM ++    N +T    L   + L      K+IH  VL+  +     V NSLID
Sbjct: 504 ALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLID 563

Query: 544 TYAKSGNIVYSRTIFDGMSSK---------------DIITWNSLICGYVLHGFWHAALDL 588
            Y K G +  +  IF  +  +               + ++W+S++ GYV +G +  AL  
Sbjct: 564 MYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKT 623

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F  M    ++ ++ T  S++ A + AG+++LG++V   I +    + +    S++ID+Y 
Sbjct: 624 FSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLG-SSIIDMYV 682

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
           + G L +A   I +   + +  +W ++++ C +HG    AV    RLF+L
Sbjct: 683 KCGSLNDAW-LIFNQAKDRNVVLWTSMISGCALHGQGREAV----RLFEL 727



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 160/345 (46%), Gaps = 30/345 (8%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLN 84
           +T +D L  NG    A+ +L  +   G    + T+   L      + + L +++H   L 
Sbjct: 489 NTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLK 548

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL---------------YTWSAMI 129
           +    D FV+  L+ +Y KCG ++ A  +F+ + + +                 +WS+M+
Sbjct: 549 VGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMV 608

Query: 130 GAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMS 189
             Y ++ R+ + ++ F  M+   +  D F    ++ AC + G  E G+ +H  + K+G  
Sbjct: 609 SGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHG 668

Query: 190 CVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
               + +S++ +YVKCG L  A   F    +++ V W SMISG    G+  EA RLF+ M
Sbjct: 669 LDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELM 728

Query: 250 CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGR 308
             E I    V+F  ++ + +  G  +   +  + M E  GI P    +TCM+  + + GR
Sbjct: 729 INEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYGRAGR 788

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAI-----SACTDLKALAMGM 348
               L+  KE     +  N ++  S++     S+C   K + MG+
Sbjct: 789 ----LNEIKEF----IHNNAISKLSSVWRSFLSSCRVHKNIEMGI 825



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/312 (23%), Positives = 136/312 (43%), Gaps = 46/312 (14%)

Query: 82  FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
              L+ E D      ++S Y + G +  + ++F  +  ++  +W+ MI    R+   R  
Sbjct: 445 LFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVA 504

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
           +EL + MV  G   +   F   L    +      GK +H+ V+K+G+     VRNS++ +
Sbjct: 505 LELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSLIDM 564

Query: 202 YVKCGKLIWARRFFESMDEK---------------DGVAWNSMISGYFQIGENDEAHRLF 246
           Y KCG++  A   F+ + ++               + V+W+SM+SGY Q G  ++A + F
Sbjct: 565 YCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQNGRFEDALKTF 624

Query: 247 DKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF------------ 294
             M   ++++   T   ++ +    G  ++  ++   ++ +G   DVF            
Sbjct: 625 SFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKC 684

Query: 295 -------------------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
                               WT MISG A +G+  +A+ LF+ M   G+ PN V+    +
Sbjct: 685 GSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVL 744

Query: 336 SACTDLKALAMG 347
           +AC+    L  G
Sbjct: 745 TACSHAGLLEEG 756



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 137/272 (50%), Gaps = 44/272 (16%)

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
           I  N L++ Y ++ N ++A  +F+ + + D       SW  LI+G+ ++G   + LG+F 
Sbjct: 322 IRGNHLLNLYAKSQNLEQAHKMFEEIPQTD-----VFSWTVLISGFARIGLSADVLGLFT 376

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKV-KEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
           KMQ     PN  T+  VL +C+  V  +++ K IHG +LR  L+    + NS++D Y K 
Sbjct: 377 KMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKC 436

Query: 549 GNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ----------------- 591
               Y+  +F  M+ KD ++WN ++  Y+  G    ++DLF Q                 
Sbjct: 437 RCFGYAEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLM 496

Query: 592 --------------MKSFGLKPNRGTF-LSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
                         M + G   N+ TF ++++LA SL+ ++ LGK++    T+  ++  +
Sbjct: 497 RNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLS-VLGLGKQIH---TQVLKVGVL 552

Query: 637 IEHY--SAMIDLYGRSGKLEEAMEFIEDMPIE 666
            + +  +++ID+Y + G++E+A    + +P E
Sbjct: 553 DDGFVRNSLIDMYCKCGEMEKASVIFKHLPQE 584


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  323 bits (827), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 193/592 (32%), Positives = 309/592 (52%), Gaps = 59/592 (9%)

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           ++ C + +A   G  +H+  +K  +   V +   LI +Y+KC+ L  A  VFD + +++V
Sbjct: 250 LNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERNV 309

Query: 395 YSWNSMIAGYCQAGYCGKAYELF----------------IKMQESDVP-----PNVITWN 433
            SW +MI+ Y Q GY  +A  LF                +K+   + P     PN  T+ 
Sbjct: 310 VSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFA 369

Query: 434 VLISG----------------YIQNGNEDEA------VDLFQRMGKNDKVK--------R 463
            +++                  I+   ED        +D++ + GK  + +        R
Sbjct: 370 TVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPER 429

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           +  S  ++I+GY QLG    AL +FR++Q      N VT   VL A + L A +  K++H
Sbjct: 430 DVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVH 489

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
             VLR  + S + + NSLID Y+K GN+ YSR IFD M  + +I+WN+++ GY  HG   
Sbjct: 490 NHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGR 549

Query: 584 AALDLFDQMKS-FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPMIEHYS 641
             L LF  M+    +KP+  T L+++   S  G+ D G  +F  ++    ++ P +EHY 
Sbjct: 550 EVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYG 609

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            ++DL GRSG++EEA EFI+ MP EP ++IW +LL ACR+H N+D+   A ++L ++EPG
Sbjct: 610 CVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPG 669

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
           +     ++  +YA  G+ ED   +R L  + T     G+  IE+  +++TF     S   
Sbjct: 670 NAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPR 729

Query: 762 SDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAP 816
            + +   ++ +  +         L      ++EE+KE+I   HSEKLAL+F LI +S A 
Sbjct: 730 REEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLI-ASPAS 788

Query: 817 HTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             IR++KN+R+CV CH  AKY+S ++  E+ L D    H    G+CSC DYW
Sbjct: 789 VPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFHRIVGGKCSCEDYW 840



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 219/472 (46%), Gaps = 67/472 (14%)

Query: 48  IATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGC 106
           +A  G  ++   Y  +L  C++  +    +++HA +     +  VF++T+L+ +Y KC  
Sbjct: 234 MALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS 293

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ---DGLFPDDFLF--- 160
           L DA  VF++M ERN+ +W+AMI AYS+     + + LFF  V+    G++  D L    
Sbjct: 294 LGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSN 353

Query: 161 PKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE 220
           P     C    +F    ++ S    LG    R++ + ++       KL +    F     
Sbjct: 354 PNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLII-------KLNYEDHVF----- 401

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM 280
                 +S++  Y + G+  EA  +F+  C  E                           
Sbjct: 402 ----VGSSLLDMYAKDGKIHEARTVFE--CLPE--------------------------- 428

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
                      DV + T +ISG+AQ G   +AL+LF+ +   G+  N VT T  ++A + 
Sbjct: 429 ----------RDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSG 478

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
           L AL +G ++H+  ++      V++ NSLI+MYSKC  L  + R+FD + ++ V SWN+M
Sbjct: 479 LAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAM 538

Query: 401 IAGYCQAGYCGKAYELFIKM-QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           + GY + G   +  +LF  M +E+ V P+ +T   ++SG    G ED+ +++F  M    
Sbjct: 539 LVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGK 598

Query: 460 -KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            +V+     +  ++    + G+   A    +KM    F P      S+L AC
Sbjct: 599 IEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMP---FEPTAAIWGSLLGAC 647



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 175/346 (50%), Gaps = 20/346 (5%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  +L +C  S    L R++H+ +  L  E  VFV + LL +YAK G + +AR VFE +
Sbjct: 367 TFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECL 426

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            ER++ + +A+I  Y++     E +ELF  +  +G+  +   +  +L A       + GK
Sbjct: 427 PERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGK 486

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H+ V++  +     ++NS++ +Y KCG L ++RR F++M E+  ++WN+M+ GY + G
Sbjct: 487 QVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHG 546

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNIL--IRSYNQLGQCDVAMEMVKRMES--LGITPDV 293
           E  E  +LF  M REE K+   +  IL  +   +  G  D  + +   M S  + + P +
Sbjct: 547 EGREVLKLFTLM-REETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKM 605

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC-----TDLKALAMGM 348
             + C++    ++GR  +A +  K+M F    P      S + AC      D+   A G 
Sbjct: 606 EHYGCVVDLLGRSGRVEEAFEFIKKMPF---EPTAAIWGSLLGACRVHSNVDIGEFA-GQ 661

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           ++  L ++ G   + ++   L N+Y+     E    + D++  K V
Sbjct: 662 QL--LEIEPGNAGNYVI---LSNLYASAGRWEDVSSLRDLMLKKTV 702



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 4/140 (2%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFV--KTKL 97
           EA+ +   +  +G K    TY  +L A     ++ L +++H  + L +EI  FV  +  L
Sbjct: 449 EALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHV-LRSEIPSFVVLQNSL 507

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD-GLFPD 156
           + +Y+KCG L  +R +F+ M ER + +W+AM+  YS+    REV++LF LM ++  + PD
Sbjct: 508 IDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPD 567

Query: 157 DFLFPKILQACGNCGDFEAG 176
                 +L  C + G  + G
Sbjct: 568 SVTILAVLSGCSHGGLEDKG 587



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/182 (21%), Positives = 84/182 (46%), Gaps = 24/182 (13%)

Query: 505 SVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           ++L  C    A  + + +H  +++     S+ +   LI  Y K  ++  +  +FD M  +
Sbjct: 248 AILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPER 307

Query: 565 DIITWNSLICGYVLHGFWHAALDLF--------------DQMKSFG-------LKPNRGT 603
           ++++W ++I  Y   G+   AL+LF              D++K           +PN  T
Sbjct: 308 NVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFT 367

Query: 604 FLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           F +++ + + +    LG+++   I +  Y+    +   S+++D+Y + GK+ EA    E 
Sbjct: 368 FATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVG--SSLLDMYAKDGKIHEARTVFEC 425

Query: 663 MP 664
           +P
Sbjct: 426 LP 427


>gi|356528072|ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 214/617 (34%), Positives = 324/617 (52%), Gaps = 80/617 (12%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N  ++  ++ G+L  AR  F+SM  +D V WNSMI+GY    E   A +LFD+M R +  
Sbjct: 43  NKKISNLIRSGRLSEARALFDSMKHRDTVTWNSMITGYVHRREIARARQLFDEMPRRD-- 100

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             VV++N+++  Y    +    +E  +R+  L    D  +W  +ISG+A+NGR  QAL L
Sbjct: 101 --VVSWNLIVSGYFSC-RGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKL 157

Query: 316 FKEMS----------FVGVMPNGVTITSAIS--------ACTDLKALAMGM----EIHSL 353
           F  M             G + NG  + SA+           T L AL  G+    E+   
Sbjct: 158 FNAMPERNAVSSNALITGFLLNG-DVDSAVDFFRTMPEHYSTSLSALISGLVRNGELDMA 216

Query: 354 A---VKMGFTDDVLVG--NSLINMYSKCEELEAAERVFDMIKD-------------KDVY 395
           A    + G  DD LV   N+LI  Y +   +E A R+FD I D             ++V 
Sbjct: 217 AGILCECGNGDDDLVHAYNTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVV 276

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESD--------------------------VP-PN 428
           SWNSM+  Y +AG    A ELF +M E D                          +P P+
Sbjct: 277 SWNSMMMCYVKAGDIVSARELFDRMVEQDTCSWNTMISGYVQISNMEEASKLFREMPIPD 336

Query: 429 VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
           V++WN+++SG+ Q G+ + A D F+RM       +N  SWNS+IAGY++      A+ +F
Sbjct: 337 VLSWNLIVSGFAQKGDLNLAKDFFERMPL-----KNLISWNSIIAGYEKNEDYKGAIQLF 391

Query: 489 RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
            +MQ     P+  T+ SV+  C  LV     K+IH  V +  +  S P+ NSLI  Y++ 
Sbjct: 392 SRMQFEGERPDRHTLSSVMSVCTGLVNLYLGKQIHQLVTKIVIPDS-PINNSLITMYSRC 450

Query: 549 GNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
           G IV + T+F+ +   KD+ITWN++I GY  HG    AL+LF  MK   + P   TF+S+
Sbjct: 451 GAIVDACTVFNEIKLYKDVITWNAMIGGYASHGLAAEALELFKLMKRLKIHPTYITFISV 510

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           + A + AG+V+ G++ F S+   Y I   +EH+++++D+ GR G+L+EAM+ I  MP +P
Sbjct: 511 MNACAHAGLVEEGRRQFKSMINDYGIERRVEHFASLVDILGRQGQLQEAMDLINTMPFKP 570

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           D ++W ALL+ACR+H N++LA++A + L  LEP       L+  IYA  G+ +DA  VR 
Sbjct: 571 DKAVWGALLSACRVHNNVELALVAADALIRLEPESSAPYVLLYNIYANLGQWDDAESVRV 630

Query: 728 LERENTRRNSFGQCWIE 744
           L  E   +   G  W++
Sbjct: 631 LMEEKNVKKQAGYSWVD 647



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 154/532 (28%), Positives = 246/532 (46%), Gaps = 72/532 (13%)

Query: 66  ACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTW 125
           +C  S  +   R+L     L+ + D      ++S YAK G +D A ++F  M ERN  + 
Sbjct: 113 SCRGSRFVEEGRRL---FELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPERNAVSS 169

Query: 126 SAMIGAYSRDQRWREVVELFFLMVQ----------DGLFPDDFL--FPKILQACGNCGDF 173
           +A+I  +  +      V+ F  M +           GL  +  L     IL  CGN GD 
Sbjct: 170 NALITGFLLNGDVDSAVDFFRTMPEHYSTSLSALISGLVRNGELDMAAGILCECGN-GDD 228

Query: 174 EAGKLMHSLVIKLGM----------------------SCVRRVR------NSVLAVYVKC 205
           +     ++L+   G                          RR R      NS++  YVK 
Sbjct: 229 DLVHAYNTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSMMMCYVKA 288

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G ++ AR  F+ M E+D  +WN+MISGY QI   +EA +LF +M   +    V+++N+++
Sbjct: 289 GDIVSARELFDRMVEQDTCSWNTMISGYVQISNMEEASKLFREMPIPD----VLSWNLIV 344

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             + Q G  ++A +  +RM       ++ +W  +I+G+ +N     A+ LF  M F G  
Sbjct: 345 SGFAQKGDLNLAKDFFERMP----LKNLISWNSIIAGYEKNEDYKGAIQLFSRMQFEGER 400

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P+  T++S +S CT L  L +G +IH L  K+   D   + NSLI MYS+C  +  A  V
Sbjct: 401 PDRHTLSSVMSVCTGLVNLYLGKQIHQLVTKIVIPDSP-INNSLITMYSRCGAIVDACTV 459

Query: 386 FDMIK-DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           F+ IK  KDV +WN+MI GY   G   +A ELF  M+   + P  IT+  +++     G 
Sbjct: 460 FNEIKLYKDVITWNAMIGGYASHGLAAEALELFKLMKRLKIHPTYITFISVMNACAHAGL 519

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTIL 504
            +E    F+ M  +  ++R    + SL+    + GQ   A+ +   M    F P+     
Sbjct: 520 VEEGRRQFKSMINDYGIERRVEHFASLVDILGRQGQLQEAMDLINTMP---FKPDKAVWG 576

Query: 505 SVLPACAY-------LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           ++L AC         LVA++        ++R   ESS P +  L + YA  G
Sbjct: 577 ALLSACRVHNNVELALVAAD-------ALIRLEPESSAPYV-LLYNIYANLG 620



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 82/164 (50%), Gaps = 21/164 (12%)

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
           S L   N  I    +SG +  +R +FD M  +D +TWNS+I GYV       A  LFD+M
Sbjct: 37  SPLNRSNKKISNLIRSGRLSEARALFDSMKHRDTVTWNSMITGYVHRREIARARQLFDEM 96

Query: 593 KSFGLKPNRGT-----FLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE--HYSAMID 645
                 P R        +S   +   +  V+ G+++F       +++P  +   ++ +I 
Sbjct: 97  ------PRRDVVSWNLIVSGYFSCRGSRFVEEGRRLF-------ELMPQRDCVSWNTVIS 143

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            Y ++G++++A++    MP E ++    AL+T   ++G++D AV
Sbjct: 144 GYAKNGRMDQALKLFNAMP-ERNAVSSNALITGFLLNGDVDSAV 186


>gi|125601229|gb|EAZ40805.1| hypothetical protein OsJ_25283 [Oryza sativa Japonica Group]
          Length = 492

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 185/502 (36%), Positives = 279/502 (55%), Gaps = 15/502 (2%)

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MY+K   ++ A   FD    +DV+  N M+A Y       +A ++F  M   D+    ++
Sbjct: 1   MYAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDL----VS 56

Query: 432 WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
           WN +I GY   G    A ++F   G  D   R+  SW+S+I+ Y +  +   AL ++R+M
Sbjct: 57  WNTMIHGYAMRGEVGLAREIFD--GTED---RDAFSWSSMISAYAKSRRSKEALELWREM 111

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
            ++   P+C+T++SV+ AC+ L A     E+H  V    +E  L +  +LID YAK G+I
Sbjct: 112 HAASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDI 171

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             ++ +FD M  KD+ TW+S+I G   HG  H +L LF +M S G+KPN  TF+ +++A 
Sbjct: 172 ESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIAC 231

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
           +  G+V  GKK F S+ E + I P +EHY  M+DL GRSG +EEA + I  M  EPD+ I
Sbjct: 232 THVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTII 291

Query: 672 WEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
           W ALL ACRIH N+++A  A+ +L  L+P       L+  IYA     E   ++RK  R 
Sbjct: 292 WRALLGACRIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRR 351

Query: 732 NTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--TARSSHSGLC--- 786
           +  +   G+  IE    ++ FV+G      S  +Y  L+ + + +        +GL    
Sbjct: 352 DNIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQAGYKPMTGLVLQD 411

Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
           I+E+ KE     HSEKLA+AFAL+ ++ A  TIRI KN+R C  CH   K +S+++  ++
Sbjct: 412 IDEQSKERSLAEHSEKLAIAFALL-TTPARSTIRITKNLRACEDCHSAMKLISLVYDRKL 470

Query: 847 FLADSKCLHHFKNGQCSCGDYW 868
            + D    HHF  GQCSC DYW
Sbjct: 471 IVRDRNRFHHFSEGQCSCKDYW 492



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 204/433 (47%), Gaps = 46/433 (10%)

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y K G++  AR  F+    +D    N M++ Y    E  EA ++FD M   ++    V+
Sbjct: 1   MYAKAGRVDLARDAFDEAPLRDVFLCNVMLAAYVSRSEVAEARKVFDGMPMRDL----VS 56

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
           +N +I  Y   G+  +A E+    E      D F+W+ MIS +A++ R+ +AL+L++EM 
Sbjct: 57  WNTMIHGYAMRGEVGLAREIFDGTED----RDAFSWSSMISAYAKSRRSKEALELWREMH 112

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
              ++P+ +T+ S +SAC+DL ALA+G E+H          D+ +G +LI+MY+KC ++E
Sbjct: 113 AASIIPDCITLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIE 172

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
           +A+RVFD + +KDV +W+SMI G    G   ++  LF KM    + PN +T+  ++    
Sbjct: 173 SAQRVFDRMPEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACT 232

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
             G   E    F+ M +   ++     +  ++    + G    A  + R M    F P+ 
Sbjct: 233 HVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSM---TFEPDT 289

Query: 501 VTILSVLPACAYLVASNKVKEIHGCV-LRRSLESSLPVMNSLIDT-YAKSGNIVYSRTIF 558
           +   ++L AC           IH  V +     + L V++ L D  Y    NI      +
Sbjct: 290 IIWRALLGAC----------RIHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSW 339

Query: 559 DGMSS---------------KDIITWNSLICGYV----LHG----FWHAALDLFDQMKSF 595
           +G++                +  I W+  I  +V    LH      +    ++ D++K  
Sbjct: 340 EGVAEMRKTIRRDNIQRIPGRSSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQA 399

Query: 596 GLKPNRGTFLSII 608
           G KP  G  L  I
Sbjct: 400 GYKPMTGLVLQDI 412



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 160/335 (47%), Gaps = 12/335 (3%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           +L A +  + +  ARK+   + +    D+     ++  YA  G +  ARE+F+   +R+ 
Sbjct: 29  MLAAYVSRSEVAEARKVFDGMPMR---DLVSWNTMIHGYAMRGEVGLAREIFDGTEDRDA 85

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
           ++WS+MI AY++ +R +E +EL+  M    + PD      ++ AC + G    G  +H  
Sbjct: 86  FSWSSMISAYAKSRRSKEALELWREMHAASIIPDCITLVSVVSACSDLGALAVGAEVHRF 145

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           V    +    ++  +++ +Y KCG +  A+R F+ M EKD   W+SMI G    G   E+
Sbjct: 146 VESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRMPEKDVQTWSSMIIGLANHGLGHES 205

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMIS 301
             LF KM  E +K   VTF  ++ +   +G      +  + M E  GI P V  + CM+ 
Sbjct: 206 LSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGKKYFRSMNEVHGIEPTVEHYGCMVD 265

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
              ++G   +A  L + M+F    P+ +   + + AC   K + +  E  +   K+   D
Sbjct: 266 LLGRSGHVEEARQLIRSMTF---EPDTIIWRALLGACRIHKNVEIAEEAMA---KLRVLD 319

Query: 362 DVLVGNSLI--NMYSKCEELEAAERVFDMIKDKDV 394
            +  G+ ++  N+Y++    E    +   I+  ++
Sbjct: 320 PLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNI 354



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 154/352 (43%), Gaps = 23/352 (6%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNL-VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T ++++ AC D  ++ +  ++H F+     E+D+ + T L+ +YAKCG ++ A+ VF+ M
Sbjct: 122 TLVSVVSACSDLGALAVGAEVHRFVESNRIELDLKLGTALIDMYAKCGDIESAQRVFDRM 181

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG- 176
            E+++ TWS+MI   +      E + LF  M+ +G+ P+   F  +L AC + G    G 
Sbjct: 182 PEKDVQTWSSMIIGLANHGLGHESLSLFSKMISEGMKPNGVTFVGVLIACTHVGLVSEGK 241

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQ 235
           K   S+    G+         ++ +  + G +  AR+   SM  E D + W +++ G  +
Sbjct: 242 KYFRSMNEVHGIEPTVEHYGCMVDLLGRSGHVEEARQLIRSMTFEPDTIIWRALL-GACR 300

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVK--RMESLGITP-- 291
           I +N E         R    LG   + +L   Y Q    +   EM K  R +++   P  
Sbjct: 301 IHKNVEIAEEAMAKLRVLDPLGDGHYVLLSNIYAQANSWEGVAEMRKTIRRDNIQRIPGR 360

Query: 292 DVFTWTCMI----SGFAQNGRTSQALDLFKEM----SFVGVMPNGVTITSAISACTDLKA 343
               W   I    SG   + R+ +   + +EM       G  P    +   I   +  ++
Sbjct: 361 SSIEWDEKIHEFVSGDRLHPRSKEIYRVLEEMMDRLKQAGYKPMTGLVLQDIDEQSKERS 420

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK---CEELEAAERVFDMIKDK 392
           LA     HS  + + F        S I +      CE+  +A ++  ++ D+
Sbjct: 421 LAE----HSEKLAIAFALLTTPARSTIRITKNLRACEDCHSAMKLISLVYDR 468


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 204/667 (30%), Positives = 332/667 (49%), Gaps = 77/667 (11%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
             L+  Y + G  + A ++   +       +V +WT +++G+  + +   A+ +F+EM  
Sbjct: 108 TFLVNVYAKCGTMETARKVFDELPR----RNVVSWTTLMTGYVHDSKPELAVQVFREMLE 163

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
            G  P   T+ +A+SA +DL +  +G +IH  ++K     D  +GNSL ++YSKC  LE 
Sbjct: 164 AGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLEC 223

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------- 432
           A + F  I+DK+V SW ++I+ +   G      + F++M    V PN  T          
Sbjct: 224 AVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCV 283

Query: 433 --------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                     N ++  Y++ G   EA  LF  M     V     
Sbjct: 284 MQSLDIGTQIHSLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLV----- 338

Query: 467 SWNSLIAGYQQLGQ-----------KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
           +WN++IAG+ ++                AL +F K+  S   P+  T  SVL  C+ LVA
Sbjct: 339 TWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVA 398

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
             + +++H   ++    S + V  +L++ Y K G+I  +   F  MS + +I+W S+I G
Sbjct: 399 LEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITG 458

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
           Y  +G    AL LF+ M+  G++PN+ TF+ ++ A S AGMVD     F  +   Y+I P
Sbjct: 459 YAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITP 518

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
           +++HY+ +ID++ R G+L+EA +FI++M +EP+  IW  L+  CR  G ++L   A E+L
Sbjct: 519 VMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQL 578

Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
            +L+P D     L+L +Y   GK ++  +VRK+ +E          WI +K+ +Y+F   
Sbjct: 579 LNLKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRN 638

Query: 756 GWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGI---------------HS 800
             S + S  +Y  L N+ E   +         E EE  E++                 HS
Sbjct: 639 ARSHAQSGEMYELLGNLHEKAKS------FGYEWEESLEVTDEEEDADEEKALTSIVYHS 692

Query: 801 EKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNG 860
           EKLA+AF L+ +S A   IR+ K+I MC  CH   + +S++   EI + DSK LH F NG
Sbjct: 693 EKLAIAFGLLNTSNAV-PIRVTKSISMCRDCHNFIRIISLLSAREIIIRDSKRLHKFING 751

Query: 861 QCSCGDY 867
            CSCGD+
Sbjct: 752 HCSCGDF 758



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 167/595 (28%), Positives = 275/595 (46%), Gaps = 88/595 (14%)

Query: 47  SIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCG 105
           S   +G KV    Y+ +LQ CID   +  A+K+HA  +      D F+ T L++VYAKCG
Sbjct: 59  SFIREGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCG 118

Query: 106 CLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQ 165
            ++ AR+VF+++  RN+ +W+ ++  Y  D +    V++F  M++ G +P ++     L 
Sbjct: 119 TMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALS 178

Query: 166 ACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA 225
           A  +    E GK +H   IK  +     + NS+ ++Y KCG L  A + F  + +K+ ++
Sbjct: 179 ASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVIS 238

Query: 226 WNSMISGYFQIGENDEAHRLFDKMCRE-------------------------------EI 254
           W ++IS +   GE     + F +M  E                                I
Sbjct: 239 WTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTI 298

Query: 255 KLGVVTFNILIRS-----YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG------F 303
           KLG  + N+ I++     Y + G    A ++   ME++ +     TW  MI+G      F
Sbjct: 299 KLGFES-NLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLV----TWNAMIAGHARMMDF 353

Query: 304 AQNGRT-----SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           A++        ++AL +F +++  G+ P+  T +S +S C+ L AL  G ++H+  +K G
Sbjct: 354 AKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTG 413

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
           F  DV+VG +L+NMY+KC  +E A + F  +  + + SW SMI GY Q G   +A  LF 
Sbjct: 414 FLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFE 473

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
            M+ + V PN IT+  ++S     G  DEA+D FQ M    K+      +  LI  + +L
Sbjct: 474 DMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRL 533

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           G+ + A    ++M      PN   I S+L              I GC  +  LE      
Sbjct: 534 GRLDEAFDFIKEMD---LEPNEF-IWSIL--------------IAGCRSQGKLELGFYAA 575

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
             L++                 +  KD  T+N L+  Y+  G W     +   MK
Sbjct: 576 EQLLN-----------------LKPKDTETYNLLLNMYLSAGKWKEVSRVRKMMK 613



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 75/302 (24%), Positives = 141/302 (46%), Gaps = 20/302 (6%)

Query: 21  NPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH 80
           + R  D   D L  +    EA+++   +   G K    T+ ++L  C    ++    ++H
Sbjct: 347 HARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVH 406

Query: 81  A------FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
           A      FL+     DV V T L+++Y KCG ++ A + F +M  R L +W++MI  Y++
Sbjct: 407 AQTIKTGFLS-----DVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQ 461

Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRR 193
           + + ++ + LF  M   G+ P+   F  +L AC + G   EA      +  +  ++ V  
Sbjct: 462 NGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMD 521

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
               ++ ++V+ G+L  A  F + MD E +   W+ +I+G    G+ +      +++   
Sbjct: 522 HYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNL 581

Query: 253 EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM--ESLGITPDVFTWTCM---ISGFAQNG 307
           + K    T+N+L+  Y   G+      + K M  E LG   D ++W  +   I  F +N 
Sbjct: 582 KPK-DTETYNLLLNMYLSAGKWKEVSRVRKMMKEEKLGRLKD-WSWISIKDKIYSFKRNA 639

Query: 308 RT 309
           R+
Sbjct: 640 RS 641



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/273 (20%), Positives = 120/273 (43%), Gaps = 47/273 (17%)

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           K++S+ + P       +L  C      +  ++IH  +++        +M  L++ YAK G
Sbjct: 66  KVESAFYVP-------ILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAKCG 118

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
            +  +R +FD +  +++++W +L+ GYV       A+ +F +M   G  P   T  + + 
Sbjct: 119 TMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALS 178

Query: 610 AHSLAGMVDLGKKV------------------FCSI-TECYQIIPMIEHY---------- 640
           A S     +LGK++                   CS+ ++C  +   ++ +          
Sbjct: 179 ASSDLHSKELGKQIHGYSIKYRIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDKNVIS 238

Query: 641 -SAMIDLYGRSGKLEEAMEFIEDMP---IEPDSSIWEALLTACRIHGNIDLAV----LAI 692
            + +I  +G +G+    ++F  +M    +EP+     + L+ C +  ++D+      L I
Sbjct: 239 WTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTI 298

Query: 693 ERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
           +  F+    ++ I+  I+ +Y  CG   +A K+
Sbjct: 299 KLGFE---SNLPIKNSIMYLYLKCGWIHEAKKL 328


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 184/576 (31%), Positives = 301/576 (52%), Gaps = 47/576 (8%)

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           +AI+AC + +AL  G ++H+  +   +   V +G  L+ MY +C  L+ A  V D + ++
Sbjct: 47  AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 106

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-------------- 438
            V SW +MI+GY Q     +A +LFIKM  +   PN  T   +++               
Sbjct: 107 SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 166

Query: 439 ---------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
                                Y ++ N  EA  +F  + + D V     S  ++I+GY Q
Sbjct: 167 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVV-----SCTAIISGYAQ 221

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
            G    AL +FR++ S     N VT  +++ A + L + +  K++H  +LR+ L   + +
Sbjct: 222 KGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVAL 281

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
            NSLID Y+K G ++YSR +FD M  + +++WN+++ GY  HG  H  + LF  +    +
Sbjct: 282 QNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EV 340

Query: 598 KPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
           KP+  T L+++   S  G+VD G  +F ++ +    +    HY  +IDL GRSG+LE+A+
Sbjct: 341 KPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKAL 400

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICG 717
             IE+MP E   SIW +LL ACR+H N+ +  L  ++L ++EP +     ++  IYA  G
Sbjct: 401 NLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAG 460

Query: 718 KPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT 777
             +D  KVRKL  E T     GQ WI +  +++TF +          + + ++ +  ++ 
Sbjct: 461 MWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIK 520

Query: 778 ARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCH 832
           A      L      +++E+KE +   HSEKLA+ F L+ +     TIR++KN+R+CV CH
Sbjct: 521 AAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGL-TIRVMKNLRICVDCH 579

Query: 833 ETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             AK+VS ++  EI L D    H   +G C+CGDYW
Sbjct: 580 NFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 213/458 (46%), Gaps = 42/458 (9%)

Query: 48  IATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGC 106
           +A  GA  R + Y   + ACI+  ++   R++HA  +       VF+ T+L+++Y +CG 
Sbjct: 33  MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 92

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           LDDAR V + M ER++ +W+ MI  YS+ +R  E ++LF  M++ G  P+++    +L +
Sbjct: 93  LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 152

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C        GK +HSL++K        V +S+L +Y K   +  ARR F+++ E+D V+ 
Sbjct: 153 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 212

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA--------- 277
            ++ISGY Q G ++EA  LF ++  E ++   VTF  L+ + + L   D           
Sbjct: 213 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 272

Query: 278 -------------MEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDL 315
                        ++M  +   L  +  VF         +W  M+ G+ ++G   + + L
Sbjct: 273 KELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISL 332

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS----LIN 371
           FK++    V P+ VT+ + +S C+    +  G++I    VK       L+       +I+
Sbjct: 333 FKDLH-KEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---EQSALLHTGHYGCIID 388

Query: 372 MYSKCEELEAAERVFDMIKDKDVYS-WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
           +  +   LE A  + + +  +   S W S++ G C+        EL  +      P N  
Sbjct: 389 LLGRSGRLEKALNLIENMPFESTPSIWGSLL-GACRVHANVHVGELVAQKLLEMEPENAG 447

Query: 431 TWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
            + +L + Y   G   +   + + M +    K    SW
Sbjct: 448 NYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSW 485



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 204/411 (49%), Gaps = 44/411 (10%)

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
           E  ++  +M     +  V     L+  Y + G  D A  ++ RM        V +WT MI
Sbjct: 60  EGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPE----RSVVSWTTMI 115

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           SG++Q  R  +ALDLF +M   G +PN  T+ + +++C+  +++  G ++HSL VK  F 
Sbjct: 116 SGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFE 175

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
             + VG+SL++MY+K E ++ A RVFD + ++DV S  ++I+GY Q G   +A +LF ++
Sbjct: 176 SHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQL 235

Query: 421 QESDVPPNVITWNVLISGY-----IQNGNEDEA-----------------VDLFQRMGK- 457
               +  N +T+  L++       +  G +  A                 +D++ + GK 
Sbjct: 236 YSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKL 295

Query: 458 -------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                  ++ ++R+  SWN+++ GY + G  +  + +F+ +      P+ VT+L+VL  C
Sbjct: 296 LYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEV-KPDSVTLLAVLSGC 354

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNS---LIDTYAKSGNIVYSRTIFDGMSSKDII 567
           ++    ++  +I   V++   +S+L        +ID   +SG +  +  + + M  +   
Sbjct: 355 SHGGLVDEGLDIFDTVVKE--QSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTP 412

Query: 568 T-WNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSLAGM 616
           + W SL+    +H   H   +L  Q K   ++P N G ++ +   ++ AGM
Sbjct: 413 SIWGSLLGACRVHANVHVG-ELVAQ-KLLEMEPENAGNYVILSNIYAAAGM 461



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 151/290 (52%), Gaps = 9/290 (3%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKT 95
           R  EA+ +   +   G      T   +L +C    SI+  +++H+ L     E  +FV +
Sbjct: 123 RHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGS 182

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            LL +YAK   + +AR VF+ + ER++ + +A+I  Y++     E ++LF  +  +G+  
Sbjct: 183 SLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQC 242

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           +   F  ++ A       + GK +H+L+++  +     ++NS++ +Y KCGKL+++RR F
Sbjct: 243 NHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVF 302

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           ++M E+  V+WN+M+ GY + G   E   LF  +  +E+K   VT   ++   +  G  D
Sbjct: 303 DNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPDSVTLLAVLSGCSHGGLVD 361

Query: 276 VAMEM----VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
             +++    VK   +L  T     + C+I    ++GR  +AL+L + M F
Sbjct: 362 EGLDIFDTVVKEQSALLHTGH---YGCIIDLLGRSGRLEKALNLIENMPF 408


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  322 bits (826), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 209/740 (28%), Positives = 351/740 (47%), Gaps = 81/740 (10%)

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           E D      +++ Y   G LD+A ++F  M  RN+  W+ MI  +++     E +E F  
Sbjct: 258 EPDQVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQN 317

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M + G+         +L A  +    + G L+H+  +K G+     V +S++++Y KCGK
Sbjct: 318 MRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGK 377

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------ 249
           +  A++ F++++E++ V WN+M+ GY Q G  +E   LF  M                  
Sbjct: 378 MEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSA 437

Query: 250 --CREEIKLG---------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
             C + + LG               +   N L+  Y + G    A+E  ++   L    D
Sbjct: 438 CACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSG----ALEDARQQFELIRNRD 493

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
             +W  +I G+ Q     +A  LF+ M+ +G++P+ V++ S +SAC  ++ L  G ++H 
Sbjct: 494 NVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHC 553

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
           L+VK G    +  G+SLI+MY+KC  +++A ++   + ++ V S N++IAGY Q     +
Sbjct: 554 LSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINL-EQ 612

Query: 413 AYELFIKMQESDVPPNVITWNVLISG---------------------------------- 438
           A  LF  M    +    IT+  L+                                    
Sbjct: 613 AVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLL 672

Query: 439 --YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
             Y+ +    +A  LF          ++   W ++I+G  Q      AL ++++M+S   
Sbjct: 673 GMYMNSLRTTDASVLFSEFSN----PKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNV 728

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            P+  T +S L ACA + +     E H  +     +S     ++L+D YAK G++  S  
Sbjct: 729 LPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQ 788

Query: 557 IFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
           +F  MS  KD+I+WNS+I G+  +G+   AL +FD+MK   + P+  TFL ++ A S +G
Sbjct: 789 VFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSG 848

Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
            V  G+ +F  +   Y + P  +H + M+DL GR G L+EA EFI  +  EPD+ +W  +
Sbjct: 849 RVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATM 908

Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
           L ACRIHG+      A E+L +LEP +     L+  IYA  G  ++   +R+  RE   +
Sbjct: 909 LGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGVK 968

Query: 736 NSFGQCWIEVKNLVYTFVTG 755
              G  WI V      FV G
Sbjct: 969 KLPGCSWIVVGQETNMFVAG 988



 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 204/768 (26%), Positives = 368/768 (47%), Gaps = 91/768 (11%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           ++ +YAKC  +D A   F+ + ++++  W++++  +S+      VV+ F L+   G++P+
Sbjct: 100 IVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPN 159

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           +F F  +L +C      + G+ +H  V+K+G   +     +++ +Y KC  L  AR  F+
Sbjct: 160 EFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFD 219

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
              E D V+W SMI GY ++G  +EA ++F +M +   +   V F  +I +Y  LG+ D 
Sbjct: 220 GAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDN 279

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
           A ++  RM +     +V  W  MISG A+ G   +A++ F+ M   G+     T+ S +S
Sbjct: 280 ASDLFSRMPN----RNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLS 335

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           A   L AL  G+ +H+ A+K G   +V VG+SL++MY+KC ++EAA++VFD + +++V  
Sbjct: 336 AIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVL 395

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-----YIQNGNE------ 445
           WN+M+ GY Q GY  +  ELF  M+     P+  T++ ++S      Y+  G++      
Sbjct: 396 WNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVII 455

Query: 446 -----------DEAVDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALG 486
                      +  VD++ + G  +  +        R+  SWN +I GY Q   +  A  
Sbjct: 456 KNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFH 515

Query: 487 VFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
           +FR+M      P+ V++ S+L ACA +    + K++H   ++   E+ L   +SLID YA
Sbjct: 516 LFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYA 575

Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
           K G I  +  I   M  + +++ N+LI GY        A++LF  M   G+     TF S
Sbjct: 576 KCGAIDSAHKILACMPERSVVSMNALIAGYAQINL-EQAVNLFRDMLVEGINSTEITFAS 634

Query: 607 IILAHSLAGMVDLGKKVFCSITEC-------YQIIPMIEHY------------------- 640
           ++ A      ++LG+++   I +        +  + ++  Y                   
Sbjct: 635 LLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNP 694

Query: 641 ------SAMIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLTACRIHGNI----DL 687
                 +AMI    ++     A++  ++M    + PD + + + L AC +  +I    + 
Sbjct: 695 KSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTET 754

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
             L     FD    D L    ++ +YA CG  + +++V K   E +R+       I   +
Sbjct: 755 HSLIFHTGFD---SDELTSSALVDMYAKCGDVKSSMQVFK---EMSRKKDV----ISWNS 804

Query: 748 LVYTFVTGGWSESYSDLLYSWLQN--VPENVT-----ARSSHSGLCIE 788
           ++  F   G++E    +     Q+   P++VT        SHSG   E
Sbjct: 805 MIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSE 852



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 159/555 (28%), Positives = 262/555 (47%), Gaps = 85/555 (15%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL 98
           EAI    ++   G K  R+T  ++L A     ++     +HA  L      +V+V + L+
Sbjct: 310 EAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLV 369

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
           S+YAKCG ++ A++VF+ + E+N+  W+AM+G Y ++    EV+ELFF M   G +PDDF
Sbjct: 370 SMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDF 429

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
            +  IL AC      + G  +HS++IK   +    V N+++ +Y K G L  AR+ FE +
Sbjct: 430 TYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELI 489

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKM-----CREEIKLGVV-------------- 259
             +D V+WN +I GY Q  +  EA  LF +M       +E+ L  +              
Sbjct: 490 RNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGK 549

Query: 260 ----------------TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
                           + + LI  Y + G  D A +++  M        V +   +I+G+
Sbjct: 550 QVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPE----RSVVSMNALIAGY 605

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT-DD 362
           AQ     QA++LF++M   G+    +T  S + AC + + L +G +IHSL +KMG   DD
Sbjct: 606 AQI-NLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDD 664

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKD-KDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
             +G SL+ MY        A  +F    + K    W +MI+G  Q      A +L+ +M+
Sbjct: 665 EFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMR 724

Query: 422 ESDVPPNVITW-----------------------------------NVLISGYIQNGNED 446
             +V P+  T+                                   + L+  Y + G+  
Sbjct: 725 SCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVK 784

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
            ++ +F+ M +    K++  SWNS+I G+ + G   +AL VF +M+ S   P+ VT L V
Sbjct: 785 SSMQVFKEMSR----KKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGV 840

Query: 507 LPACAYLVASNKVKE 521
           L AC++   S +V E
Sbjct: 841 LTACSH---SGRVSE 852



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/457 (29%), Positives = 229/457 (50%), Gaps = 38/457 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVF 92
           NG  NE + +  ++ + G      TY ++L AC     + L  +LH+ +  N     ++F
Sbjct: 406 NGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFAS-NLF 464

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V   L+ +YAK G L+DAR+ FE +R R+  +W+ +I  Y +++   E   LF  M   G
Sbjct: 465 VGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLG 524

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + PD+     IL AC +    E GK +H L +K G        +S++ +Y KCG +  A 
Sbjct: 525 ILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAH 584

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           +    M E+  V+ N++I+GY QI   ++A  LF  M  E I    +TF  L+ + ++  
Sbjct: 585 KILACMPERSVVSMNALIAGYAQINL-EQAVNLFRDMLVEGINSTEITFASLLDACHEQQ 643

Query: 273 QCDVAMEMVKRMESLGITPD---------------------------------VFTWTCM 299
           + ++  ++   +  +G+  D                                    WT M
Sbjct: 644 KLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAM 703

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           ISG +QN  +  AL L+KEM    V+P+  T  SA+ AC  + ++  G E HSL    GF
Sbjct: 704 ISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGF 763

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
             D L  ++L++MY+KC +++++ +VF +M + KDV SWNSMI G+ + GY   A  +F 
Sbjct: 764 DSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFD 823

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           +M++S V P+ +T+  +++    +G   E   +F  M
Sbjct: 824 EMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMM 860



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/554 (24%), Positives = 243/554 (43%), Gaps = 107/554 (19%)

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           K++H+  +KLG      + N ++ +Y KC  + +A R F+ +++KD +AWNS++S + + 
Sbjct: 79  KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRS---------------------YNQLGQCD 275
           G      + F  +    +     TF I++ S                     +  +  C+
Sbjct: 139 GFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCE 198

Query: 276 VAM-------EMVKRMESL---GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
            A+         +    S+    +  D  +WT MI G+ + G   +A+ +F+EM  VG  
Sbjct: 199 GALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQE 258

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P+ V   + I+A  DL                                     L+ A  +
Sbjct: 259 PDQVAFVTVINAYVDLG-----------------------------------RLDNASDL 283

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP------------------- 426
           F  + +++V +WN MI+G+ + GY  +A E F  M+++ +                    
Sbjct: 284 FSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAAL 343

Query: 427 ----------------PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
                            NV   + L+S Y + G  + A  +F  +      ++N   WN+
Sbjct: 344 DFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLN-----EQNVVLWNA 398

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           ++ GY Q G  N  + +F  M+S  FYP+  T  S+L ACA L   +   ++H  +++  
Sbjct: 399 MLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNK 458

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
             S+L V N+L+D YAKSG +  +R  F+ + ++D ++WN +I GYV       A  LF 
Sbjct: 459 FASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFR 518

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           +M   G+ P+  +  SI+ A +    ++ GK+V C   +  Q   +    S++ID+Y + 
Sbjct: 519 RMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSG-SSLIDMYAKC 577

Query: 651 GKLEEAMEFIEDMP 664
           G ++ A + +  MP
Sbjct: 578 GAIDSAHKILACMP 591



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 144/306 (47%), Gaps = 8/306 (2%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID-VFVKT 95
           L +A+ +   +  +G      T+ +LL AC +   ++L R++H+  L +  ++D  F+  
Sbjct: 610 LEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGV 669

Query: 96  KLLSVYAKCGCLDDAREVFEDM-RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
            LL +Y       DA  +F +    ++   W+AMI   S++      ++L+  M    + 
Sbjct: 670 SLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVL 729

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           PD   F   L+AC      + G   HSL+   G        ++++ +Y KCG +  + + 
Sbjct: 730 PDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQV 789

Query: 215 FESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
           F+ M  +KD ++WNSMI G+ + G  ++A R+FD+M +  +    VTF  ++ + +  G+
Sbjct: 790 FKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGR 849

Query: 274 CDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
                 +   M +L G+ P      CM+    + G   +A +   +++F    P+     
Sbjct: 850 VSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFINKLNF---EPDAKVWA 906

Query: 333 SAISAC 338
           + + AC
Sbjct: 907 TMLGAC 912



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 150/299 (50%), Gaps = 18/299 (6%)

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           NV++  Y +  + D A   F+++   D +     +WNS+++ + + G  +  +  F  + 
Sbjct: 98  NVIVDLYAKCADVDYAERAFKQLEDKDIL-----AWNSILSMHSKQGFPHLVVKYFGLLW 152

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
           +S  +PN  T   VL +CA L      +++H  V++   ES      +LI  YAK   + 
Sbjct: 153 NSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLT 212

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            +R+IFDG    D ++W S+I GY+  G    A+ +F +M+  G +P++  F+++I A+ 
Sbjct: 213 DARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAY- 271

Query: 613 LAGMVDLGKKVFCSITECYQIIPM--IEHYSAMIDLYGRSGKLEEAMEFIEDM---PIEP 667
               VDLG+    + ++ +  +P   +  ++ MI  + + G   EA+EF ++M    I+ 
Sbjct: 272 ----VDLGR--LDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKS 325

Query: 668 DSSIWEALLTACRIHGNIDLAVLA-IERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
             S   ++L+A      +D  +L   E L      +V +   ++ +YA CGK E A KV
Sbjct: 326 TRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKV 384



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 82/162 (50%), Gaps = 6/162 (3%)

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
           +NK+  IH   L+    S   + N ++D YAK  ++ Y+   F  +  KDI+ WNS++  
Sbjct: 77  TNKI--IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSM 134

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQII 634
           +   GF H  +  F  + + G+ PN  TF  ++ + +   MV  G++V C++ +  ++ I
Sbjct: 135 HSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESI 194

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
              E   A+I +Y +   L +A   I D  +E D   W +++
Sbjct: 195 SYCE--GALIGMYAKCNFLTDARS-IFDGAVELDKVSWTSMI 233


>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
          Length = 1167

 Score =  322 bits (826), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 226/751 (30%), Positives = 376/751 (50%), Gaps = 55/751 (7%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
            NG   E   VL  I   G K   +T+ +++  C     + + + +H F+       D F+
Sbjct: 424  NGFDKEVFEVLRQILEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFL 483

Query: 94   KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
               L+S+YA  G L  AR++F+   E+N+  W++MI AY+++Q+  E  ++F  M++  +
Sbjct: 484  TPALISMYAGGGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANM 543

Query: 154  FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             P+   F  I+  C N  +F  GK +H+ V+K  +     V  ++L++Y K G    A  
Sbjct: 544  QPNVVTFVSIIPCCENSANFWXGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDXNSAXF 603

Query: 214  FFESMDEKDGVAWNSMISGY--FQIGENDEAHRLFDKMC---REEIKLGVVTFNILIRSY 268
             F  M  K     +SMISGY    +G      RL   +     +E    +   N L+  Y
Sbjct: 604  IFYQMPRKTSYR-DSMISGYGIMSMGRPFFWVRLLMHLAIKTGKEFDSXLNISNALLAFY 662

Query: 269  NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
            +  G+   + ++ ++M       +  +W  +ISG   NG T +A+ L  +M    +  + 
Sbjct: 663  SDCGKLSSSFKLFQKMP----LRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDL 718

Query: 329  VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            VT+ S I  C   + L  GM +H  A+K GF  DV + N+LI+MY  C ++ A + +F++
Sbjct: 719  VTLISIIPICRVXENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEV 778

Query: 389  IKDKDVYSWNSMIAGY--------CQAGYC--------------------------GKAY 414
            +  + + SWN++I GY          A +C                          GK+ 
Sbjct: 779  MPWRSIVSWNALITGYRFHYLQNEVMASFCQMIXEGQKPNYVTLLNLLPSCXTLLQGKSI 838

Query: 415  ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
              F       V   +IT   LIS Y +  N +  + LF+  GK D      A WN++++ 
Sbjct: 839  HAFAVRTGVIVETPIIT--SLISMYARFENINSFIFLFEMGGKED-----IALWNAIMSV 891

Query: 475  YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS 534
            Y Q      ++  F ++  +   P+ +T LS++ AC  L + N    +   V+++  +  
Sbjct: 892  YVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKH 951

Query: 535  LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
            + + N+LID +A+ GNI  ++ IF+G+SSKD ++W+++I GY LHG   AAL L  QM+ 
Sbjct: 952  IVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRL 1011

Query: 595  FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP-MIEHYSAMIDLYGRSGKL 653
             G+KP+  T+ S++ A S  G +D G  +F S+ E  + +P  +EHY+ M+DL GR+G+L
Sbjct: 1012 SGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVE--EGVPRRMEHYACMVDLLGRTGQL 1069

Query: 654  EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIY 713
             EA +F+E +P +P  S+ E+LL AC IHGN+ L       LF+L+P +     ++  IY
Sbjct: 1070 NEAYDFVEKLPCKPSVSLLESLLXACIIHGNVKLGEKICSLLFELDPKNSGSYVMLYNIY 1129

Query: 714  AICGKPEDALKVRKLERENTRRNSFGQCWIE 744
            A  G+  DA +VR    E   R   G   +E
Sbjct: 1130 AAAGRWMDANRVRSDMEERQLRKIPGFSLVE 1160



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 194/721 (26%), Positives = 336/721 (46%), Gaps = 70/721 (9%)

Query: 32   LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
            LC +G   + + V       G      T+  +++AC    ++ +A  +H   L    E +
Sbjct: 320  LCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACSALGAVWIAEGVHCIVLRTAFEEN 379

Query: 91   VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            + ++T L+  YAK G +  AR V + + + +L TW+A+I  YS +   +EV E+   +++
Sbjct: 380  LVIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQILE 439

Query: 151  DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
             GL P+   F  I+  C      + GK +H  V+K G S    +  +++++Y   G L  
Sbjct: 440  MGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFI 499

Query: 211  ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI----R 266
            AR  F+S  EK+ V WNSMIS Y Q  ++ EA ++F +M +  ++  VVTF  +I     
Sbjct: 500  ARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCEN 559

Query: 267  SYN-QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM----SF 321
            S N   G+   A  M  R++S      +   T ++S +A+ G  + A  +F +M    S+
Sbjct: 560  SANFWXGKSLHAHVMKYRLDS-----QLSVATALLSMYAKLGDXNSAXFIFYQMPRKTSY 614

Query: 322  VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG--FTDDVLVGNSLINMYSKCEEL 379
               M +G  I S       ++ L     +H LA+K G  F   + + N+L+  YS C +L
Sbjct: 615  RDSMISGYGIMSMGRPFFWVRLL-----MH-LAIKTGKEFDSXLNISNALLAFYSDCGKL 668

Query: 380  EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------- 432
             ++ ++F  +  ++  SWN++I+G    G   KA  L  KMQ+  +  +++T        
Sbjct: 669  SSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPIC 728

Query: 433  ----------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
                                        N LIS Y   G+ +    LF+ M       R+
Sbjct: 729  RVXENLIQGMTLHGYAIKTGFACDVSLVNALISMYFNCGDINAGKFLFEVMP-----WRS 783

Query: 465  TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
              SWN+LI GY+    +N  +  F +M      PN VT+L++LP+C  L+     K IH 
Sbjct: 784  IVSWNALITGYRFHYLQNEVMASFCQMIXEGQKPNYVTLLNLLPSCXTLLQG---KSIHA 840

Query: 525  CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
              +R  +    P++ SLI  YA+  NI     +F+    +DI  WN+++  YV       
Sbjct: 841  FAVRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKE 900

Query: 585  ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMI 644
            ++  F ++    ++P+  TFLS+I A      ++L   V   + +       I   +A+I
Sbjct: 901  SVTFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQ-KGFDKHIVISNALI 959

Query: 645  DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID--LAVLAIERLFDLEPGD 702
            DL+ R G +  A +  E +    D+  W  ++    +HG+ +  LA+L+  RL  ++P  
Sbjct: 960  DLFARCGNISIAKKIFEGLS-SKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDG 1018

Query: 703  V 703
            +
Sbjct: 1019 I 1019


>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
 gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
 gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 721

 Score =  322 bits (826), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 231/747 (30%), Positives = 367/747 (49%), Gaps = 98/747 (13%)

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
           D   GK +H+L +K  ++    + N  + +Y KCG+L +AR  F S +E +         
Sbjct: 23  DLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN--------- 73

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
                                     V ++N+++++Y +  +  +A ++   +      P
Sbjct: 74  --------------------------VFSYNVIVKAYAKDSKIHIARQLFDEIPQ----P 103

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           D  ++  +ISG+A    T  A+ LFK M  +G   +G T++  I+AC D   L    ++H
Sbjct: 104 DTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIK--QLH 161

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWNSMIAGYCQAGYC 410
             +V  GF     V N+ +  YSK   L  A  VF  M + +D  SWNSMI  Y Q    
Sbjct: 162 CFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEG 221

Query: 411 GKAYELFIKMQESDVPPNVITW----NVLIS-----------------GYIQNGNEDEA- 448
            KA  L+ +M       ++ T     N L S                 G+ QN +     
Sbjct: 222 AKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGL 281

Query: 449 VDLFQRMG------KNDKVKRNTAS-----WNSLIAGY---QQLGQKNNALGVFRKMQSS 494
           +D + + G       ++KV +   S     WN++I+GY   ++L ++  A+  FR+MQ  
Sbjct: 282 IDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEE--AVKSFRQMQRI 339

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS-LPVMNSLIDTYAKSGNIVY 553
              P+  + + V  AC+ L + ++ K+IHG  ++  + S+ + V N+LI  Y KSGN+  
Sbjct: 340 GHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQD 399

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           +R +FD M   + +++N +I GY  HG    AL L+ +M   G+ PN+ TF++++ A + 
Sbjct: 400 ARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAH 459

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
            G VD G++ F ++ E ++I P  EHYS MIDL GR+GKLEEA  FI+ MP +P S  W 
Sbjct: 460 CGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWA 519

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
           ALL ACR H N+ LA  A   L  ++P       ++  +YA   K E+   VRK  R   
Sbjct: 520 ALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKR 579

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEE--- 790
            R   G  WIEVK   + FV   WS      +  +L    E +  +    G  ++++   
Sbjct: 580 IRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYL----EEMMKKMKKVGYVMDKKWAM 635

Query: 791 ---------EKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMM 841
                    ++E   G HSEKLA+AF L+ S++    + +VKN+R+C  CH   K++S +
Sbjct: 636 VKEDEAGEGDEEMRLGHHSEKLAVAFGLM-STRDGEELVVVKNLRICGDCHNAIKFMSAV 694

Query: 842 HHCEIFLADSKCLHHFKNGQCSCGDYW 868
              EI + D+   H FK+G+CSCGDYW
Sbjct: 695 AGREIIVRDNLRFHCFKDGKCSCGDYW 721



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 231/522 (44%), Gaps = 76/522 (14%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+ +LL   +    +   + LHA ++  +     ++    +++Y+KCG L  AR  F   
Sbjct: 10  TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69

Query: 118 RERNLYTWSAMIGAYSRD-------QRWREVVE------------------------LFF 146
            E N+++++ ++ AY++D       Q + E+ +                        LF 
Sbjct: 70  EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M + G   D F    ++ AC  C   +  K +H   +  G      V N+ +  Y K G
Sbjct: 130 RMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187

Query: 207 KLIWARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---- 261
            L  A   F  MDE +D V+WNSMI  Y Q  E  +A  L+ +M  +  K+ + T     
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247

Query: 262 -------------------------------NILIRSYNQLGQCDVAMEMVKRMESLGIT 290
                                          + LI  Y++ G CD   +  K  + + ++
Sbjct: 248 NALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEI-LS 306

Query: 291 PDVFTWTCMISGFAQNGRTS-QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
           PD+  W  MISG++ N   S +A+  F++M  +G  P+  +     SAC++L + +   +
Sbjct: 307 PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQ 366

Query: 350 IHSLAVKMGF-TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           IH LA+K    ++ + V N+LI++Y K   L+ A  VFD + + +  S+N MI GY Q G
Sbjct: 367 IHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHG 426

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           +  +A  L+ +M +S + PN IT+  ++S     G  DE  + F  M +  K++     +
Sbjct: 427 HGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY 486

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           + +I     LG+        R + +  + P  V   ++L AC
Sbjct: 487 SCMI---DLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGAC 525



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 161/363 (44%), Gaps = 13/363 (3%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLL 98
           +A+ +   +  +G K+   T  ++L A    + +   R+ H   +      +  V + L+
Sbjct: 223 KALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLI 282

Query: 99  SVYAKCGCLD---DAREVFEDMRERNLYTWSAMIGAYSRDQRW-REVVELFFLMVQDGLF 154
             Y+KCG  D   D+ +VF+++   +L  W+ MI  YS ++    E V+ F  M + G  
Sbjct: 283 DFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHR 342

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR-RVRNSVLAVYVKCGKLIWARR 213
           PDD  F  +  AC N       K +H L IK  +   R  V N+++++Y K G L  AR 
Sbjct: 343 PDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARW 402

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M E + V++N MI GY Q G   EA  L+ +M    I    +TF  ++ +    G+
Sbjct: 403 VFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGK 462

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            D   E    M E+  I P+   ++CMI    + G+  +A      M +    P  V   
Sbjct: 463 VDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPY---KPGSVAWA 519

Query: 333 SAISACTDLKALAMG-MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           + + AC   K +A+     + L V         V   L NMY+   + E    V   ++ 
Sbjct: 520 ALLGACRKHKNMALAERAANELMVMQPLAATPYV--MLANMYADARKWEEMASVRKSMRG 577

Query: 392 KDV 394
           K +
Sbjct: 578 KRI 580



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 191/443 (43%), Gaps = 57/443 (12%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF--VKTKLL 98
           A+ +   +   G +V   T   L+ AC D   + L ++LH F ++    D +  V    +
Sbjct: 124 AMVLFKRMRKLGFEVDGFTLSGLIAACCDR--VDLIKQLHCF-SVSGGFDSYSSVNNAFV 180

Query: 99  SVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           + Y+K G L +A  VF  M E R+  +W++MI AY + +   + + L+  M+  G   D 
Sbjct: 181 TYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDM 240

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG---KLIWARRF 214
           F    +L A  +      G+  H  +IK G      V + ++  Y KCG    +  + + 
Sbjct: 241 FTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKV 300

Query: 215 FESMDEKDGVAWNSMISGYFQIGE-NDEAHRLFDKM------------------------ 249
           F+ +   D V WN+MISGY    E ++EA + F +M                        
Sbjct: 301 FQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSS 360

Query: 250 ---CREEIKLGVVTF---------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
              C++   L + +          N LI  Y + G    A  +  RM  L    +  ++ 
Sbjct: 361 PSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPEL----NAVSFN 416

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVK 356
           CMI G+AQ+G  ++AL L++ M   G+ PN +T  + +SAC     +  G E  +++   
Sbjct: 417 CMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKET 476

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD-VYSWNSMIAGYCQA----GYCG 411
                +    + +I++  +  +LE AER  D +  K    +W +++ G C+         
Sbjct: 477 FKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALL-GACRKHKNMALAE 535

Query: 412 KAYELFIKMQESDVPPNVITWNV 434
           +A    + MQ     P V+  N+
Sbjct: 536 RAANELMVMQPLAATPYVMLANM 558


>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 222/778 (28%), Positives = 379/778 (48%), Gaps = 87/778 (11%)

Query: 57  RNTYI-NLLQACIDSNSIHLARKL-HA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREV 113
           + TY+ +LLQ CID  + HLA KL HA  L      D F+  +L+  YAKC  +D +R +
Sbjct: 4   KTTYLASLLQTCIDKKA-HLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRL 62

Query: 114 FEDMRERNLYTWSAMIGAY-------------------------------SRDQRWREVV 142
           F+ M +R++YTW+A++GAY                               +R+   ++ +
Sbjct: 63  FDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKAL 122

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
            +++ M ++G  P  F    +L ACG   D E G+  H + IK+G+     V N++L +Y
Sbjct: 123 GVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMY 182

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
            KC  +  A + F  + E + V++ +M+ G     + +EA RLF  M R  I +  V+ +
Sbjct: 183 AKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLS 242

Query: 263 ILI-------------RSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGR 308
            ++                N +   DV  + V  +    G   D+     ++  +A+NG 
Sbjct: 243 SVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGN 302

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA--MGMEIHSLAVKMGFTDDVLVG 366
              A  +F  M  V V+   V I          KA+     M+ H      GF  D +  
Sbjct: 303 MDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYH------GFEPDEITY 356

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
            +++    K  ++EA  ++FD +    + SWN++++GY Q     +A +LF +MQ   V 
Sbjct: 357 VNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVH 416

Query: 427 PNVITWNVLISGY-----IQNGNEDEAVD-----------------LFQRMGKNDKVKR- 463
           P+  T  +++S       ++ G +  AV                  ++ + GK +  KR 
Sbjct: 417 PDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRI 476

Query: 464 -------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
                  +   WNS++AG         A   F+KM+    +P+  +  +VL  CA L + 
Sbjct: 477 FDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSL 536

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
           ++ +++H  + R    +   V ++LID Y+K G++  +R +FD M  K+ +TWN +I GY
Sbjct: 537 SQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGY 596

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
             +G    A+ L++ M   G KP+  TF++++ A S +G+VD G K+F S+ + + + P+
Sbjct: 597 AQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPL 656

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF 696
           ++HY+ +ID  GR+G+L EA   I+ MP + D  IWE LL++CR++ ++ LA  A E LF
Sbjct: 657 VDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELF 716

Query: 697 DLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
            L+P +     L+  IY+  G+ +DA  VR+L   N      G  WIE KN +  F+ 
Sbjct: 717 HLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAFMV 774



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 166/735 (22%), Positives = 300/735 (40%), Gaps = 173/735 (23%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
              +LQ C +     AGKL+H+ +++  +S    + N ++  Y KC  +  +RR F+ M 
Sbjct: 8   LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
           ++D   WN+++  Y +  E ++AH LF                                E
Sbjct: 68  KRDIYTWNAILGAYCKASELEDAHVLF-------------------------------AE 96

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
           M +R        ++ +W  +IS   +NG   +AL ++  MS  G +P   T+ S +SAC 
Sbjct: 97  MPER--------NIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASVLSACG 148

Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
            L  +  G   H +++K+G  +++ VGN+L+ MY+KC  +  A + F  + + +  S+ +
Sbjct: 149 ALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTA 208

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------------------------- 432
           M+ G   +    +A+ LF  M  + +  + ++                            
Sbjct: 209 MMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSD 268

Query: 433 ----------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
                                 N L+  Y +NGN D A  +F  M +   V     SWN 
Sbjct: 269 VHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVV-----SWNV 323

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +IAGY Q  Q + A+   ++MQ   F P+ +T +++L AC                    
Sbjct: 324 MIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACI------------------- 364

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
                           KSG+I   R +FDGMSS  + +WN+++ GY  +     A+ LF 
Sbjct: 365 ----------------KSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFR 408

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDL-GKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
           +M+   + P+R T L+IIL+ SLAGM+ L G +   ++++       I   S +I +Y +
Sbjct: 409 EMQFRSVHPDRTT-LAIILS-SLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSK 466

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
            GK+E A   I D   E D   W +++    ++     A    +++   E G    Q   
Sbjct: 467 CGKVEMAKR-IFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKM--REKGMFPSQFSY 523

Query: 710 LQIYAICGKPEDALKVRKLERENTRR-------------NSFGQCW-IEVKNLVYTFVTG 755
             + + C K     + R++  +  R              + + +C  ++    V+  + G
Sbjct: 524 ATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLG 583

Query: 756 GWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQA 815
             + +++++++ + QN                         G   E + L   +IGS + 
Sbjct: 584 KNTVTWNEMIHGYAQN-------------------------GCGDEAVLLYEDMIGSGEK 618

Query: 816 PHTIRIVKNIRMCVH 830
           P  I  V  +  C H
Sbjct: 619 PDGITFVAVLTACSH 633



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 113/486 (23%), Positives = 193/486 (39%), Gaps = 82/486 (16%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLL 98
           ++AI  L  +   G +    TY+N+L ACI                              
Sbjct: 335 SKAIEYLQRMQYHGFEPDEITYVNMLVACI------------------------------ 364

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
               K G ++  R++F+ M   +L +W+ ++  YS+++  +E V+LF  M    + PD  
Sbjct: 365 ----KSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRT 420

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
               IL +       E G+ +H++  K        + + ++ +Y KCGK+  A+R F+ +
Sbjct: 421 TLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRI 480

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKM----------------------------- 249
            E D V WNSM++G      + EA   F KM                             
Sbjct: 481 AELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGR 540

Query: 250 ------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
                  RE         + LI  Y++ G  D A  +   M    +  +  TW  MI G+
Sbjct: 541 QVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMM----LGKNTVTWNEMIHGY 596

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDD 362
           AQNG   +A+ L+++M   G  P+G+T  + ++AC+    +  G++I +S+  + G    
Sbjct: 597 AQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPL 656

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIAG---YCQAGYCGKAYELFI 418
           V     +I+   +   L  AE + D +  K D   W  +++    Y       +A E   
Sbjct: 657 VDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELF 716

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
            +   +  P V+  N+    Y   G  D+A  + + M  N  VK    SW     G Q  
Sbjct: 717 HLDPQNSAPYVLLANI----YSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAF 772

Query: 479 GQKNNA 484
              +N 
Sbjct: 773 MVDDNG 778


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 208/632 (32%), Positives = 323/632 (51%), Gaps = 73/632 (11%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P+   W  M  G A +     AL L+  M  +G++PN  T    + +C   K    G +I
Sbjct: 38  PNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQI 97

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM---------------------- 388
           H   +K+GF  D+ V  SLI+MY++   LE A++VFD                       
Sbjct: 98  HGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYI 157

Query: 389 ---------IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
                    I  KDV SWN+MI+GY + G   KA ELF +M +++V P+  T   ++S  
Sbjct: 158 ESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSAC 217

Query: 440 IQNGN----------------------EDEAVDLFQRMGKNDKV--------KRNTASWN 469
            Q+G+                       +  +DL+ + G+ +           ++  SWN
Sbjct: 218 AQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWN 277

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           +LI GY  +     AL +F++M  S   PN VT+LS+LPACA+L A +  + IH  + ++
Sbjct: 278 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKK 337

Query: 530 ----SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHA 584
                + ++  +  SLID YAK G+I  +  + D  + ++ + TWN++I G+ +HG  +A
Sbjct: 338 LKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANA 397

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMI 644
           A D+F +M+  G++P+  TF+ ++ A S +GM+DLG+ +F S+ + Y I P +EHY  MI
Sbjct: 398 AFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMI 457

Query: 645 DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVL 704
           DL G SG  +EA E I  MP+EPD  IW +LL AC+IHGN++L     ++L  +EP +  
Sbjct: 458 DLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPG 517

Query: 705 IQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC-WIEVKNLVYTFVTGGW-----S 758
              L+  IYA  GK  +  K+R L  +   +     C  IE+ ++V+ F+ G        
Sbjct: 518 SYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFIIGDKLHPQNR 577

Query: 759 ESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
           E Y  L    +          +S     +EEE KE     HSEKLA+AF LI S++    
Sbjct: 578 EIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI-STKPGTK 636

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLAD 850
           + IVKN+R+C +CHE  K +S ++  EI   D
Sbjct: 637 LTIVKNLRVCRNCHEATKLISKIYKREIIARD 668



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 230/511 (45%), Gaps = 76/511 (14%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           L  A  VFE + E N   W+ M   ++        ++L+ +M+  GL P+ F FP +L++
Sbjct: 25  LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C     F+ G+ +H  V+KLG      V  S++++Y + G+L  A++ F+    +D V++
Sbjct: 85  CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
            ++I+GY   G  + A ++FD++  ++    VV++N +I  Y + G    A+E+ K M  
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKD----VVSWNAMISGYAETGNYKKALELFKEMMK 200

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
             + PD  T   ++S  AQ+G                                   ++ +
Sbjct: 201 TNVKPDESTMATVVSACAQSG-----------------------------------SIEL 225

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G ++HS     GF  ++ + N+LI++YSKC E+E A  + + + +KDV SWN++I GY  
Sbjct: 226 GRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTH 285

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED-------------------- 446
                +A  LF +M  S   PN +T   ++      G  D                    
Sbjct: 286 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTN 345

Query: 447 ------EAVDLFQRMGKNDKV---------KRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
                   +D++ + G  D            R+ ++WN++I G+   G+ N A  +F +M
Sbjct: 346 ASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRM 405

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGN 550
           + +   P+ +T + +L AC++    +  + I   + +  ++   L     +ID    SG 
Sbjct: 406 RKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGL 465

Query: 551 IVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
              +  + + M    D + W SL+    +HG
Sbjct: 466 FKEAEEMINTMPMEPDGVIWCSLLKACKIHG 496



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 202/472 (42%), Gaps = 73/472 (15%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+  LL++C  S +    +++H   L L  ++D++V T L+S+YA+ G L+DA++VF+  
Sbjct: 77  TFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRS 136

Query: 118 RERNL--YT-----------------------------WSAMIGAYSRDQRWREVVELFF 146
             R++  YT                             W+AMI  Y+    +++ +ELF 
Sbjct: 137 SHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFK 196

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M++  + PD+     ++ AC   G  E G+ +HS +   G     ++ N+++ +Y KCG
Sbjct: 197 EMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCG 256

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           ++  A    E +  KD ++WN++I GY  +    EA  LF +M R       VT   ++ 
Sbjct: 257 EVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 316

Query: 267 SYNQLGQCDVA--------------------------MEMVKRMESLGITPDV------- 293
           +   LG  D+                           ++M  +   +   P V       
Sbjct: 317 ACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFN 376

Query: 294 ---FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
               TW  MI GFA +GR + A D+F  M   G+ P+ +T    +SAC+    L +G  I
Sbjct: 377 RSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNI 436

Query: 351 -HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAGYCQAG 408
             S+      T  +     +I++       + AE + + M  + D   W S++   C+  
Sbjct: 437 FRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKA-CKIH 495

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDK 460
              +  E F K      P N  ++ +L + Y   G  +E   +  R   NDK
Sbjct: 496 GNLELGESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKI--RTLLNDK 545



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 174/397 (43%), Gaps = 66/397 (16%)

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------ 432
           L  A  VF+ I + +   WN M  G+  +     A +L++ M    + PN  T+      
Sbjct: 25  LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84

Query: 433 -----------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVK- 462
                                          LIS Y QNG  ++A  +F R    D V  
Sbjct: 85  CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144

Query: 463 -------------------------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
                                    ++  SWN++I+GY + G    AL +F++M  +   
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           P+  T+ +V+ ACA   +    +++H  +      S+L ++N+LID Y+K G +  +  +
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACEL 264

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
            +G+S+KD+I+WN+LI GY     +  AL LF +M   G  PN  T LSI+ A +  G +
Sbjct: 265 LEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 324

Query: 618 DLGKKVFCSITECYQIIPMIEHYS---AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           D+G+ +   I +  + + +    S   ++ID+Y + G ++ A +  +        S W A
Sbjct: 325 DIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNA 384

Query: 675 LLTACRIHGNIDLA--VLAIERLFDLEPGDVLIQRLI 709
           ++    +HG  + A  + +  R   +EP D+    L+
Sbjct: 385 MIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLL 421



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 13/213 (6%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-----LVTEIDVFVK 94
           EA+ +   +   G      T +++L AC    +I + R +H +++     +V      ++
Sbjct: 291 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLR 350

Query: 95  TKLLSVYAKCGCLDDAREVFEDMR-ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           T L+ +YAKCG +D A +V +     R+L TW+AMI  ++   R     ++F  M ++G+
Sbjct: 351 TSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGI 410

Query: 154 FPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PDD  F  +L AC + G  + G+ +  S+     ++        ++ +    G    A 
Sbjct: 411 EPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAE 470

Query: 213 RFFESMD-EKDGVAWNSM-----ISGYFQIGEN 239
               +M  E DGV W S+     I G  ++GE+
Sbjct: 471 EMINTMPMEPDGVIWCSLLKACKIHGNLELGES 503



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 90/178 (50%), Gaps = 7/178 (3%)

Query: 551 IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA 610
           + Y+ ++F+ +   + + WN +  G+ L     +AL L+  M S GL PN  TF  ++ +
Sbjct: 25  LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84

Query: 611 HSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSS 670
            + +     G+++   + +    + +  H +++I +Y ++G+LE+A + + D     D  
Sbjct: 85  CAKSKTFKEGQQIHGHVLKLGFDLDLYVH-TSLISMYAQNGRLEDAQK-VFDRSSHRDVV 142

Query: 671 IWEALLTACRIHGNIDLAVLAIERLFDLEP-GDVLIQRLILQIYAICGKPEDALKVRK 727
            + AL+T     G I+ A    +++FD  P  DV+    ++  YA  G  + AL++ K
Sbjct: 143 SYTALITGYASRGYIESA----QKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFK 196


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 208/708 (29%), Positives = 343/708 (48%), Gaps = 82/708 (11%)

Query: 134 RDQRWREVVELFFLMVQ--DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCV 191
            D+ + E   + F+ +Q   G  P++F+   +++AC   G  E G  +H  V++ G    
Sbjct: 12  EDEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQD 71

Query: 192 RRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-- 249
             V  S++  Y K G +  AR  F+ + EK  V W ++I+GY + G +  +  LF +M  
Sbjct: 72  VYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRE 131

Query: 250 ---------------------------------CREEIKLGVVTFNILIRSYNQLGQCDV 276
                                             R   ++ V   N+LI  Y +  +   
Sbjct: 132 TNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKA 191

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
             ++  +M    +  ++ +WT MISG+ QN    +A+ LF EM+ +G  P+G   TS ++
Sbjct: 192 GRKLFDQM----VVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLT 247

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           +C  L+AL  G ++H+  +K     +  V N LI+MY+K   L  A++VFD++ +++V S
Sbjct: 248 SCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVIS 307

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------------------ 432
           +N+MI GY       +A ELF +M+    PP+++T+                        
Sbjct: 308 YNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLII 367

Query: 433 -----------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK 481
                      + LI  Y +     +A  +F+ M + D V      WN++  GY Q  + 
Sbjct: 368 KXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIV-----VWNAMFFGYTQHLEN 422

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
             AL ++  +Q S   PN  T  +++ A + L +    ++ H  +++  L+    V N+L
Sbjct: 423 EEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNAL 482

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
           +D YAK G+I  +R +F+    +D++ WNS+I  +  HG    AL +F +M   G++PN 
Sbjct: 483 VDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNY 542

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
            TF++++ A S AG V+ G   F S+   + I P  EHY+ ++ L GRSGKL EA EFIE
Sbjct: 543 VTFVAVLSACSHAGXVEDGLNHFNSMP-GFGIKPGTEHYACVVSLLGRSGKLFEAKEFIE 601

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPED 721
            MPIEP + +W +LL+ACRI GN++L   A E     +P D     L+  I+A  G   D
Sbjct: 602 KMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWAD 661

Query: 722 ALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             KVR     +      G+ WIEV N V  F+    +   +D++ S L
Sbjct: 662 VKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVL 709



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 249/513 (48%), Gaps = 62/513 (12%)

Query: 62  NLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           ++++AC     +    +LH F+     + DV+V T L+  Y+K G ++ AR VF+ + E+
Sbjct: 42  SVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEK 101

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
              TW+ +I  Y++  R    +ELF  M +  + PD ++   +L AC      E GK +H
Sbjct: 102 TAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIH 161

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
           + V++ G      V N ++  Y KC ++   R+ F+ M  K+ ++W +MISGY Q   + 
Sbjct: 162 AYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDW 221

Query: 241 EAHRLFDKMCR--------------------EEIKLG------VVTFNILIRSYNQLGQC 274
           EA +LF +M R                    E ++ G       +  N+    + + G  
Sbjct: 222 EAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLI 281

Query: 275 DVAMEM-----VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           D+  +       K++  +    +V ++  MI G++   + S+AL+LF EM      P+ +
Sbjct: 282 DMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLL 341

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           T  S +     L AL +  +IH L +K G + D+  G++LI++YSKC  ++ A  VF+ +
Sbjct: 342 TFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEM 401

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY-----IQNGN 444
            +KD+  WN+M  GY Q     +A +L+  +Q S   PN  T+  LI+       +++G 
Sbjct: 402 NEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQ 461

Query: 445 E-----------------DEAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLG 479
           +                 +  VD++ + G         N  + R+   WNS+I+ + Q G
Sbjct: 462 QFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHG 521

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
           +   ALG+FR+M      PN VT ++VL AC++
Sbjct: 522 EAEEALGMFREMMKEGIQPNYVTFVAVLSACSH 554



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/490 (26%), Positives = 230/490 (46%), Gaps = 44/490 (8%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           R    ++L AC     +   +++HA+ L   TE+DV V   L+  Y KC  +   R++F+
Sbjct: 138 RYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFD 197

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            M  +N+ +W+ MI  Y ++    E ++LF  M + G  PD F    +L +CG+    E 
Sbjct: 198 QMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQ 257

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G+ +H+  IK  +     V+N ++ +Y K   L  A++ F+ M E++ +++N+MI GY  
Sbjct: 258 GRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSS 317

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL----GITP 291
             +  EA  LF +M        ++TF  L+     L     A+E+ K++  L    G++ 
Sbjct: 318 QEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASL----FALELSKQIHGLIIKXGVSL 373

Query: 292 DVFT-------------------------------WTCMISGFAQNGRTSQALDLFKEMS 320
           D+F                                W  M  G+ Q+    +AL L+  + 
Sbjct: 374 DLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQ 433

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
           F    PN  T  + I+A ++L +L  G + H+  VKMG      V N+L++MY+KC  +E
Sbjct: 434 FSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIE 493

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
            A ++F+    +DV  WNSMI+ + Q G   +A  +F +M +  + PN +T+  ++S   
Sbjct: 494 EARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACS 553

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
             G  ++ ++ F  M     +K  T  +  +++   + G+   A     KM      P  
Sbjct: 554 HAGXVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMP---IEPAA 609

Query: 501 VTILSVLPAC 510
           +   S+L AC
Sbjct: 610 IVWRSLLSAC 619



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 168/327 (51%), Gaps = 8/327 (2%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKT 95
           +L+EA+ +   +  +       T+++LL       ++ L++++H  +      +D+F  +
Sbjct: 320 KLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGS 379

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            L+ VY+KC  + DAR VFE+M E+++  W+AM   Y++     E ++L+  +      P
Sbjct: 380 ALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKP 439

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           ++F F  ++ A  N      G+  H+ ++K+G+     V N+++ +Y KCG +  AR+ F
Sbjct: 440 NEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMF 499

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
            S   +D V WNSMIS + Q GE +EA  +F +M +E I+   VTF  ++ + +  G  +
Sbjct: 500 NSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVE 559

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
             +     M   GI P    + C++S   ++G+  +A +  ++M    + P  +   S +
Sbjct: 560 DGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMP---IEPAAIVWRSLL 616

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDD 362
           SAC     +A  +E+   A +M  + D
Sbjct: 617 SACR----IAGNVELGKYAAEMAISTD 639


>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score =  322 bits (825), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 235/802 (29%), Positives = 380/802 (47%), Gaps = 123/802 (15%)

Query: 7   TTFQQLHSLLTKKSNPRFRDTHLDFL---CGNGRLNEAITVLDSIATQGAKVRRNTYINL 63
           TTF+ L ++  KKS   +  T +  L      G + +   +   +   G   +R   I L
Sbjct: 3   TTFRTLLAIDPKKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKL 62

Query: 64  LQACIDSNSIHLARKLHAFLNLVTEID---VFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           L   ++       RK      +V E D   + V   ++S Y + G L  AR +F++M ER
Sbjct: 63  LILYLN------CRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPER 116

Query: 121 NLYTWSAMIGA---YSR--DQRWR--------------------------EVVELFFLMV 149
           N  +WSA+I     Y R  +  W                           E ++LFF ++
Sbjct: 117 NEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLL 176

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           + G+ P+D  F  +++ACG  GDF  G  +  LV+K G      V NS++ + ++ G++ 
Sbjct: 177 ESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEID 236

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            ARR F+ M+++D V+W +++  Y + G+  EA R+FD                      
Sbjct: 237 LARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFD---------------------- 274

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
                    EM +R E         +W+ MI+ ++Q+G   +AL LF +M   G  PN  
Sbjct: 275 ---------EMPERNE--------ISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNIS 317

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
                +SA   L+AL+ G+ IH    K+G                               
Sbjct: 318 CFACTLSALASLRALSAGINIHGHVTKIGI------------------------------ 347

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
            DKDV+  +S+I  YC+ G       +F  + E     NV+ WN ++ GY  NG  +E  
Sbjct: 348 -DKDVFIGSSLIDLYCKCGKPDDGRLVFDLILEK----NVVCWNSMVGGYSINGRLEETE 402

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           +LF+ + +     +N  SW ++IAGY +  Q    L VF  +  S   PN  T  SVL A
Sbjct: 403 ELFELIPE-----KNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCA 457

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           CA + + +K   +HG +++  ++  + V  +L D YAK G+I  S+ +F+ M  K+ I+W
Sbjct: 458 CASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISW 517

Query: 570 NSLICGYVLHGFWHAALDLFDQM-KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT 628
             +I G    GF   +L LF++M ++  + PN    LS++ A S  G+VD G   F S+ 
Sbjct: 518 TVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSME 577

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
           + Y I P  +HY+ ++DL  RSG+L EA EFI  +P +P+++ W ALL+ C+ + +  +A
Sbjct: 578 KVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIA 637

Query: 689 VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL 748
               ++L+ L   +     L+  IYA  G+  D   +RKL RE   + S G  W+EV+N 
Sbjct: 638 ERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQ 697

Query: 749 VYTFVTGGWSESYSDLLYSWLQ 770
           V++F +   S S S+ +Y  LQ
Sbjct: 698 VHSFYSEDGSHSQSNEIYGTLQ 719


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 184/576 (31%), Positives = 301/576 (52%), Gaps = 47/576 (8%)

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           +AI+AC + +AL  G ++H+  +   +   V +G  L+ MY +C  L+ A  V D + ++
Sbjct: 15  AAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPER 74

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-------------- 438
            V SW +MI+GY Q     +A +LFIKM  +   PN  T   +++               
Sbjct: 75  SVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVH 134

Query: 439 ---------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
                                Y ++ N  EA  +F  + + D V     S  ++I+GY Q
Sbjct: 135 SLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVV-----SCTAIISGYAQ 189

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
            G    AL +FR++ S     N VT  +++ A + L + +  K++H  +LR+ L   + +
Sbjct: 190 KGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVAL 249

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
            NSLID Y+K G ++YSR +FD M  + +++WN+++ GY  HG  H  + LF  +    +
Sbjct: 250 QNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK-EV 308

Query: 598 KPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
           KP+  T L+++   S  G+VD G  +F ++ +    +    HY  +IDL GRSG+LE+A+
Sbjct: 309 KPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKAL 368

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICG 717
             IE+MP E   SIW +LL ACR+H N+ +  L  ++L ++EP +     ++  IYA  G
Sbjct: 369 NLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAG 428

Query: 718 KPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT 777
             +D  KVRKL  E T     GQ WI +  +++TF +          + + ++ +  ++ 
Sbjct: 429 MWKDVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIK 488

Query: 778 ARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCH 832
           A      L      +++E+KE +   HSEKLA+ F L+ +     TIR++KN+R+CV CH
Sbjct: 489 AAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGL-TIRVMKNLRICVDCH 547

Query: 833 ETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             AK+VS ++  EI L D    H   +G C+CGDYW
Sbjct: 548 NFAKFVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 213/458 (46%), Gaps = 42/458 (9%)

Query: 48  IATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGC 106
           +A  GA  R + Y   + ACI+  ++   R++HA  +       VF+ T+L+++Y +CG 
Sbjct: 1   MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
           LDDAR V + M ER++ +W+ MI  YS+ +R  E ++LF  M++ G  P+++    +L +
Sbjct: 61  LDDARNVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTS 120

Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
           C        GK +HSL++K        V +S+L +Y K   +  ARR F+++ E+D V+ 
Sbjct: 121 CSGPQSIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSC 180

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA--------- 277
            ++ISGY Q G ++EA  LF ++  E ++   VTF  L+ + + L   D           
Sbjct: 181 TAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILR 240

Query: 278 -------------MEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDL 315
                        ++M  +   L  +  VF         +W  M+ G+ ++G   + + L
Sbjct: 241 KELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISL 300

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS----LIN 371
           FK++    V P+ VT+ + +S C+    +  G++I    VK       L+       +I+
Sbjct: 301 FKDLH-KEVKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVK---EQSALLHTGHYGCIID 356

Query: 372 MYSKCEELEAAERVFDMIKDKDVYS-WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
           +  +   LE A  + + +  +   S W S++ G C+        EL  +      P N  
Sbjct: 357 LLGRSGRLEKALNLIENMPFESTPSIWGSLL-GACRVHANVHVGELVAQKLLEMEPENAG 415

Query: 431 TWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
            + +L + Y   G   +   + + M +    K    SW
Sbjct: 416 NYVILSNIYAAAGMWKDVFKVRKLMLEKTVTKEPGQSW 453



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 204/411 (49%), Gaps = 44/411 (10%)

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
           E  ++  +M     +  V     L+  Y + G  D A  ++ RM        V +WT MI
Sbjct: 28  EGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPE----RSVVSWTTMI 83

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           SG++Q  R  +ALDLF +M   G +PN  T+ + +++C+  +++  G ++HSL VK  F 
Sbjct: 84  SGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFE 143

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
             + VG+SL++MY+K E ++ A RVFD + ++DV S  ++I+GY Q G   +A +LF ++
Sbjct: 144 SHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQL 203

Query: 421 QESDVPPNVITWNVLISGY-----IQNGNEDEA-----------------VDLFQRMGK- 457
               +  N +T+  L++       +  G +  A                 +D++ + GK 
Sbjct: 204 YSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKL 263

Query: 458 -------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                  ++ ++R+  SWN+++ GY + G  +  + +F+ +      P+ VT+L+VL  C
Sbjct: 264 LYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKEV-KPDSVTLLAVLSGC 322

Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNS---LIDTYAKSGNIVYSRTIFDGMSSKDII 567
           ++    ++  +I   V++   +S+L        +ID   +SG +  +  + + M  +   
Sbjct: 323 SHGGLVDEGLDIFDTVVKE--QSALLHTGHYGCIIDLLGRSGRLEKALNLIENMPFESTP 380

Query: 568 T-WNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFLSIILAHSLAGM 616
           + W SL+    +H   H   +L  Q K   ++P N G ++ +   ++ AGM
Sbjct: 381 SIWGSLLGACRVHANVHVG-ELVAQ-KLLEMEPENAGNYVILSNIYAAAGM 429



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 151/290 (52%), Gaps = 9/290 (3%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKT 95
           R  EA+ +   +   G      T   +L +C    SI+  +++H+ L     E  +FV +
Sbjct: 91  RHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMFVGS 150

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            LL +YAK   + +AR VF+ + ER++ + +A+I  Y++     E ++LF  +  +G+  
Sbjct: 151 SLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQC 210

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           +   F  ++ A       + GK +H+L+++  +     ++NS++ +Y KCGKL+++RR F
Sbjct: 211 NHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVF 270

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
           ++M E+  V+WN+M+ GY + G   E   LF  +  +E+K   VT   ++   +  G  D
Sbjct: 271 DNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPDSVTLLAVLSGCSHGGLVD 329

Query: 276 VAMEM----VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
             +++    VK   +L  T     + C+I    ++GR  +AL+L + M F
Sbjct: 330 EGLDIFDTVVKEQSALLHTGH---YGCIIDLLGRSGRLEKALNLIENMPF 376


>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 583

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 194/578 (33%), Positives = 297/578 (51%), Gaps = 72/578 (12%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           +V  W   +  FA+    + A+ LF  +    + P+  T +  + AC+ L  +  G  +H
Sbjct: 77  EVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVH 136

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
               K+G   ++ + N ++++Y+ C E+  A +VFD                        
Sbjct: 137 GYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFD------------------------ 172

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                  KM + DV    ITWN++I+  ++ G+ + A  LF  M +     RN  SW S+
Sbjct: 173 -------KMPQRDV----ITWNIMIARLVKMGDAEGAYKLFAEMPE-----RNVRSWTSM 216

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           I GY Q G+   A+ +F +M+ +   PN VT+++VL ACA +      + IH    R   
Sbjct: 217 IGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGY 276

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQ 591
           E ++ V N+LID Y K G +  +  IFD M  + +++W+++I G   HG    AL LF++
Sbjct: 277 EKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNK 336

Query: 592 MKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSG 651
           M + G+KPN  TF+ I+ A S  GMV+ G+K F S+T  Y I+P IEHY  M+DL+ R+G
Sbjct: 337 MINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAG 396

Query: 652 KLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQ 711
            L+EA EFI +MPI P+  +W ALL  C++H N+ LA  A   L  L+P +     ++  
Sbjct: 397 LLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSN 456

Query: 712 IYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDL-LYSWLQ 770
           IYA  G+ ED  +VRKL R+                       G W +    + L  ++ 
Sbjct: 457 IYAEAGRWEDVARVRKLMRDR----------------------GTWEKLLQRMKLKGYVP 494

Query: 771 NVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
           N        +S   L +EE++KE+    HSEKLA+ F LI ++     IRI+KN+R+C  
Sbjct: 495 N--------TSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGT-VIRIMKNLRVCED 545

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   K +S++   EI + D    H FKNG CSCGDYW
Sbjct: 546 CHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 583



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 207/435 (47%), Gaps = 43/435 (9%)

Query: 77  RKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
           ++LHA  L   + +     +++ SV A       A+ +F+ +    +  W+  + +++  
Sbjct: 32  KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSFAEG 91

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
               + + LF+ + +  + PD +    +L+AC    D   GK++H  V KLG+     ++
Sbjct: 92  DSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQ 151

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N ++ +Y  CG++  AR+                               +FDKM + +  
Sbjct: 152 NMIVHLYALCGEIGVARK-------------------------------VFDKMPQRD-- 178

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             V+T+NI+I    ++G  + A ++   M       +V +WT MI G+AQ G++ +A+DL
Sbjct: 179 --VITWNIMIARLVKMGDAEGAYKLFAEMPE----RNVRSWTSMIGGYAQCGKSKEAIDL 232

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
           F EM   G++PN VT+ + + AC D+  L +G  IH  + + G+  ++ V N+LI+MY K
Sbjct: 233 FLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVK 292

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
           C  LE A R+FD ++++ V SW++MIAG    G    A  LF KM  + V PN +T+  +
Sbjct: 293 CGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGI 352

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           +      G  ++    F  M ++  +      +  ++  + + G    A      M  + 
Sbjct: 353 LHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIA- 411

Query: 496 FYPNCVTILSVLPAC 510
             PN V   ++L  C
Sbjct: 412 --PNGVVWGALLGGC 424



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 184/379 (48%), Gaps = 13/379 (3%)

Query: 45  LDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKC 104
           ++ +  Q     +N  ++L   C     I +ARK+    + + + DV     +++   K 
Sbjct: 139 VEKLGLQSNMFLQNMIVHLYALC---GEIGVARKV---FDKMPQRDVITWNIMIARLVKM 192

Query: 105 GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKIL 164
           G  + A ++F +M ERN+ +W++MIG Y++  + +E ++LF  M   GL P++     +L
Sbjct: 193 GDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVL 252

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
            AC + G+   G+ +H    + G     RV N+++ +YVKCG L  A R F++M+E+  V
Sbjct: 253 VACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVV 312

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           +W++MI+G    G  ++A  LF+KM    +K   VTF  ++ + + +G  +   +    M
Sbjct: 313 SWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASM 372

Query: 285 -ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
               GI P +  + CM+  F++ G   +A +    M    + PNGV   + +  C   K 
Sbjct: 373 TRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMP---IAPNGVVWGALLGGCKVHKN 429

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           + +  E      K+   +D      L N+Y++    E   RV  +++D+   +W  ++  
Sbjct: 430 VKLAEEATRHLSKLDPLNDGYY-VVLSNIYAEAGRWEDVARVRKLMRDRG--TWEKLLQR 486

Query: 404 YCQAGYCGKAYELFIKMQE 422
               GY      + + M+E
Sbjct: 487 MKLKGYVPNTSVVLLDMEE 505



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 159/369 (43%), Gaps = 41/369 (11%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVK 94
           G+  EAI +   +   G      T + +L AC D  ++ L R++H F N    E ++ V 
Sbjct: 224 GKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVC 283

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+ +Y KCGCL+DA  +F++M ER + +WSAMI   +   R  + + LF  M+  G+ 
Sbjct: 284 NTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVK 343

Query: 155 PDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRN--SVLAVYVKCGKLIWA 211
           P+   F  IL AC + G  E G K   S+    G+  V R+ +   ++ ++ + G L  A
Sbjct: 344 PNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGI--VPRIEHYGCMVDLFSRAGLLQEA 401

Query: 212 RRFFESMD-EKDGVAWNSMISG---YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
             F  +M    +GV W +++ G   +  +   +EA R   K+        VV  NI    
Sbjct: 402 HEFIMNMPIAPNGVVWGALLGGCKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNI---- 457

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           Y + G+ +    + K M   G      TW                  L + M   G +PN
Sbjct: 458 YAEAGRWEDVARVRKLMRDRG------TWE----------------KLLQRMKLKGYVPN 495

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGF--TDDVLVGNSLINMYSKCEELEAAERV 385
             T    +    D K   +      LAV  G   T    V   + N+   CE+  AA ++
Sbjct: 496 --TSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNL-RVCEDCHAALKI 552

Query: 386 FDMIKDKDV 394
             ++  +++
Sbjct: 553 ISVVSTREI 561


>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 649

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 198/586 (33%), Positives = 300/586 (51%), Gaps = 51/586 (8%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           PD F W  MI GF+ +    ++L L++ M       N  T  S + AC++L AL    +I
Sbjct: 107 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQI 166

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H+   K+G+ +DV   NSLIN Y+     + A  +FD I   D  SWNS+I GY +AG  
Sbjct: 167 HAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKM 226

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
             A  LF KM E     N I+W  +ISGY+Q G   EA+ LF  M               
Sbjct: 227 DIALTLFRKMVEK----NAISWTTMISGYVQAGMHKEALQLFHEM--------------- 267

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
                                Q+S   P+ V++ + L ACA L A  + K IH  + +  
Sbjct: 268 ---------------------QNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTR 306

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           +     +   LID YAK G++  +  +F  +  K +  W +LI GY  HG    A+  F 
Sbjct: 307 IRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFM 366

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           +M+  G+KPN  TF +++ A S  G+V+ GK +F ++   Y + P IEHY  ++DL  R+
Sbjct: 367 EMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRA 426

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP--GDVLIQRL 708
           G L+EA  FI++MP++P++ IW ALL ACRIH NI+L     E L  ++P  G   + + 
Sbjct: 427 GLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHK- 485

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS- 767
              I+A+  K + A + R+L +E       G   I ++   + F+ G  S    + + S 
Sbjct: 486 -ANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSK 544

Query: 768 W---LQNVPEN--VTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
           W    + + EN  V          ++++E+E I   HSEKLA+ + LI +     TIRI+
Sbjct: 545 WKIMRRKLEENGYVPELEDMLLDLVDDDERETIVHQHSEKLAITYGLIKTKPGT-TIRIM 603

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN+R+C  CH+  K +S ++  +I + D    HHF++G+CSCGDYW
Sbjct: 604 KNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 649



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 197/424 (46%), Gaps = 45/424 (10%)

Query: 90  DVFVKTKLLSV---YAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
           D +  TK LS          L  A+ VF+     + + W+ MI  +S        + L+ 
Sbjct: 74  DSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQ 133

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M+      + + FP +L+AC N    E    +H+ + KLG                   
Sbjct: 134 RMLCCSAPHNAYTFPSLLKACSNLSALEETTQIHAQITKLGY------------------ 175

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
                        E D  A NS+I+ Y   G    AH LFD++ + +     V++N +I+
Sbjct: 176 -------------ENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPD----AVSWNSVIK 218

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            Y + G+ D+A+ + ++M    +  +  +WT MISG+ Q G   +AL LF EM    V P
Sbjct: 219 GYAKAGKMDIALTLFRKM----VEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEP 274

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           + V++ +A+SAC  L AL  G  IHS   K     D ++G  LI+MY+KC ++  A  VF
Sbjct: 275 DNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVF 334

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
             I+ K V +W ++I+GY   G+  +A   F++MQ+  + PNVIT+  +++     G  +
Sbjct: 335 KNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVE 394

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           E   +F  M ++  +K     +  ++    + G  + A    R +Q     PN V   ++
Sbjct: 395 EGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAK---RFIQEMPLKPNAVIWGAL 451

Query: 507 LPAC 510
           L AC
Sbjct: 452 LKAC 455



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 127/277 (45%), Gaps = 4/277 (1%)

Query: 80  HAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
           H   + + + D      ++  YAK G +D A  +F  M E+N  +W+ MI  Y +    +
Sbjct: 199 HLLFDRIPKPDAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHK 258

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E ++LF  M    + PD+      L AC   G  E GK +HS + K  +     +   ++
Sbjct: 259 EALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLI 318

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +Y KCG +  A   F+++  K   AW ++ISGY   G   EA   F +M +  IK  V+
Sbjct: 319 DMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVI 378

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
           TF  ++ + +  G  +    +   ME    + P +  + C++   ++ G   +A    +E
Sbjct: 379 TFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQE 438

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           M    + PN V   + + AC   K + +G EI  + +
Sbjct: 439 MP---LKPNAVIWGALLKACRIHKNIELGEEIGEILI 472



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 95/200 (47%), Gaps = 3/200 (1%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVK 94
           G   EA+ +   +     +    +  N L AC    ++   + +H++L      +D  + 
Sbjct: 255 GMHKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLG 314

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             L+ +YAKCG + +A EVF++++ +++  W+A+I  Y+     RE +  F  M + G+ 
Sbjct: 315 CVLIDMYAKCGDMGEALEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIK 374

Query: 155 PDDFLFPKILQACGNCGDFEAGKLM-HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           P+   F  +L AC   G  E GKL+ +++     +         V+ +  + G L  A+R
Sbjct: 375 PNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIEHYGCVVDLLSRAGLLDEAKR 434

Query: 214 FFESMDEK-DGVAWNSMISG 232
           F + M  K + V W +++  
Sbjct: 435 FIQEMPLKPNAVIWGALLKA 454



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 43/207 (20%), Positives = 88/207 (42%), Gaps = 16/207 (7%)

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID---TYAKSGNI 551
           C  PN  T  S            ++K+IH  +L+  L      +   +    +   S  +
Sbjct: 44  CMMPNTETRCS---------KQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFL 94

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
            Y++ +FDG    D   WN +I G+        +L L+ +M       N  TF S++ A 
Sbjct: 95  PYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKAC 154

Query: 612 SLAGMVDLGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSS 670
           S    ++   ++   IT+  Y+    +   +++I+ Y  +G  + A    + +P +PD+ 
Sbjct: 155 SNLSALEETTQIHAQITKLGYE--NDVYAVNSLINSYAATGNFKLAHLLFDRIP-KPDAV 211

Query: 671 IWEALLTACRIHGNIDLAVLAIERLFD 697
            W +++      G +D+A+    ++ +
Sbjct: 212 SWNSVIKGYAKAGKMDIALTLFRKMVE 238


>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  322 bits (825), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 201/588 (34%), Positives = 313/588 (53%), Gaps = 36/588 (6%)

Query: 291 PDVFTWTCMISGFAQNGR---TSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAM 346
           P+ F W  ++   A+       S+AL LF  M   G V PN  T  S + AC     L  
Sbjct: 81  PNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLRE 140

Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           G +IH L VK GF +D  V ++L+ MY  C  +E A  +F     K+V  ++    G CQ
Sbjct: 141 GKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFC----KNVVDFD----GSCQ 192

Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                   EL  + Q+     NV+ WN++I G ++ G+   A +LF  M       R+  
Sbjct: 193 -------MELDKRKQDG----NVVLWNIMIDGQVRLGDIKSAKNLFDEMPP-----RSVV 236

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           SWN +I+GY Q G    A+ +F++MQSS   PN VT++SVLPA A + A    K IH   
Sbjct: 237 SWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYA 296

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
            +  +E    + ++L+D Y+K G+I  +  +F+ +  ++ ITW+++I  + +HG    A+
Sbjct: 297 GKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAI 356

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
             F  M   G+ PN   ++ I+ A S AG+V+ G+  F  + +   + P IEHY  M+DL
Sbjct: 357 IHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDL 416

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GR+G LEEA E I +MPIEPD  IW+ALL AC++H N+ +     E L +L P D    
Sbjct: 417 LGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSY 476

Query: 707 RLILQIYAICGKPEDALKVR-KLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
             +  +YA  G  E   +VR K++  + R++  G  WIE+  +++ F+    S S +  +
Sbjct: 477 VALSNLYASLGNWEAVARVRLKMKGMDIRKDP-GCSWIEIHGIIHEFLVEDDSHSKAKEI 535

Query: 766 YSWLQNVPENVTARSSHSG-----LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIR 820
            + L  +   + +           L  +E+E+      HSEK+A+AF LI S+   H ++
Sbjct: 536 QAMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQYHSEKIAVAFGLI-STAPQHPLK 594

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           IVKN+R+C  CH + K +S+++  +I + D K  H F++G CSC DYW
Sbjct: 595 IVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEHGSCSCMDYW 642



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 187/424 (44%), Gaps = 62/424 (14%)

Query: 107 LDDAREVFEDMRERNLYTWSAM--IGAYSRDQRWR-EVVELFFLMVQDG-LFPDDFLFPK 162
           +D AR VF  M E N + W+ +  I A + D+  + E + LF  M+ DG + P+ F FP 
Sbjct: 68  IDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPS 127

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF------- 215
           +L+AC        GK +H L++K G      V ++++ +YV C  +  A   F       
Sbjct: 128 VLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDF 187

Query: 216 -----ESMDEK--DG--VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
                  +D++  DG  V WN MI G  ++G+   A  LFD+M        VV++N++I 
Sbjct: 188 DGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPR----SVVSWNVMIS 243

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            Y Q G    A+ + + M+S  I P                                   
Sbjct: 244 GYAQNGHFIEAINLFQEMQSSNIDP----------------------------------- 268

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           N VT+ S + A   + AL +G  IH  A K     D ++G++L++MYSKC  ++ A +VF
Sbjct: 269 NYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVF 328

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
           + +  ++  +W+++I  +   G    A   F  M ++ V PN + +  ++S     G  +
Sbjct: 329 ETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVE 388

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           E    F  M K   ++     +  ++    + G    A  + R M      P+ V   ++
Sbjct: 389 EGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMP---IEPDDVIWKAL 445

Query: 507 LPAC 510
           L AC
Sbjct: 446 LGAC 449



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 147/340 (43%), Gaps = 20/340 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL-VTEIDVFV 93
           NG   EAI +   + +        T +++L A     ++ L + +H +      EID  +
Sbjct: 248 NGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVL 307

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +Y+KCG +D A +VFE + +RN  TWSA+IGA++   R  + +  F LM + G+
Sbjct: 308 GSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGV 367

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIK-LGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            P+D  +  IL AC + G  E G+   S ++K +G+         ++ +  + G L  A 
Sbjct: 368 TPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAE 427

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
               +M  E D V W +++ G  ++ +N +      +   E       ++  L   Y  L
Sbjct: 428 ELIRNMPIEPDDVIWKALL-GACKMHKNLKMGERVAETLMELAPHDSGSYVALSNLYASL 486

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ--------NGRTSQALDLFKEMSFV- 322
           G  +    +  +M+ + I  D       I G           + +  +   +  EMS   
Sbjct: 487 GNWEAVARVRLKMKGMDIRKDPGCSWIEIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKL 546

Query: 323 ---GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
              G  PN    T  +   TD +  A  ++ HS  + + F
Sbjct: 547 RSNGYRPN----TLEVFLNTDEQERARALQYHSEKIAVAF 582


>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
          Length = 728

 Score =  322 bits (824), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 235/802 (29%), Positives = 380/802 (47%), Gaps = 123/802 (15%)

Query: 7   TTFQQLHSLLTKKSNPRFRDTHLDFL---CGNGRLNEAITVLDSIATQGAKVRRNTYINL 63
           TTF+ L ++  KKS   +  T +  L      G + +   +   +   G   +R   I L
Sbjct: 3   TTFRTLLAIDPKKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKL 62

Query: 64  LQACIDSNSIHLARKLHAFLNLVTEID---VFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           L   ++       RK      +V E D   + V   ++S Y + G L  AR +F++M ER
Sbjct: 63  LILYLN------CRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPER 116

Query: 121 NLYTWSAMIGA---YSR--DQRWR--------------------------EVVELFFLMV 149
           N  +WSA+I     Y R  +  W                           E ++LFF ++
Sbjct: 117 NEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLL 176

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           + G+ P+D  F  +++ACG  GDF  G  +  LV+K G      V NS++ + ++ G++ 
Sbjct: 177 ESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEID 236

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            ARR F+ M+++D V+W +++  Y + G+  EA R+FD                      
Sbjct: 237 LARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFD---------------------- 274

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
                    EM +R E         +W+ MI+ ++Q+G   +AL LF +M   G  PN  
Sbjct: 275 ---------EMPERNE--------ISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNIS 317

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
                +SA   L+AL+ G+ IH    K+G                               
Sbjct: 318 CFACTLSALASLRALSAGINIHGHVTKIGI------------------------------ 347

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
            DKDV+  +S+I  YC+ G       +F  + E     NV+ WN ++ GY  NG  +E  
Sbjct: 348 -DKDVFIGSSLIDLYCKCGKPDDGRLVFDLILE----KNVVCWNSMVGGYSINGRLEEXE 402

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           +LF+ + +     +N  SW ++JAGY +  Q    L VF  +  S   PN  T  SVL A
Sbjct: 403 ELFELIPE-----KNDXSWGTIJAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCA 457

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           CA + + +K   +HG +++  ++  + V  +L D YAK G+I  S+ +F+ M  K+ I+W
Sbjct: 458 CASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISW 517

Query: 570 NSLICGYVLHGFWHAALDLFDQM-KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT 628
             +I G    GF   +L LF++M ++  + PN    LS++ A S  G+VD G   F S+ 
Sbjct: 518 TVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSME 577

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
           + Y I P  +HY+ ++DL  RSG+L EA EFI  +P +P+++ W ALL+ C+ + +  +A
Sbjct: 578 KVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIA 637

Query: 689 VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL 748
               ++L+ L   +     L+  IYA  G+  D   +RKL RE   + S G  W+EV+N 
Sbjct: 638 ERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQ 697

Query: 749 VYTFVTGGWSESYSDLLYSWLQ 770
           V++F +   S S SD +Y  LQ
Sbjct: 698 VHSFYSEDGSHSQSDEIYGTLQ 719


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  322 bits (824), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 223/771 (28%), Positives = 369/771 (47%), Gaps = 106/771 (13%)

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG 223
           ++ C   G     K++H  +I+        + N+++  Y      I+ARR F+ + + + 
Sbjct: 10  IKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQPNL 69

Query: 224 VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKR 283
            +WN+++  Y + G   E  R F+K+   +     VT+N+LI  Y+  G    A++    
Sbjct: 70  FSWNNLLLAYSKSGHLSEMERTFEKLPDRD----GVTWNVLIEGYSLSGLVGAAVK---- 121

Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
                       +  M+  F+ N                      VT+ + +   +    
Sbjct: 122 -----------AYNTMMKDFSSN-------------------LTRVTLMTMLKLSSSNGH 151

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF----------------- 386
           +++G +IH   +K+GF   +LVG+ L++MYSK   +  A++VF                 
Sbjct: 152 VSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGG 211

Query: 387 ----DMIKD---------KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
                MI+D         KD  SW++MI G  Q G   +A E F +M+   +  +   + 
Sbjct: 212 LLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFG 271

Query: 434 VLIS-----GYIQNGNEDEA-----------------VDLFQR-----MGKN--DKVK-R 463
            ++      G I +G +  A                 +D++ +       K   D++K +
Sbjct: 272 SVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 331

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           N  SW +++ GY Q G+   A+ +F  MQ S   P+  T+   + ACA + +  +  + H
Sbjct: 332 NVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFH 391

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
           G  +   L   + V NSL+  Y K G+I  S  +F+ M+ +D ++W +++  Y   G   
Sbjct: 392 GKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAV 451

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
            A+ LFD+M   GLKP+  T   +I A S AG+V+ G++ F  +   Y I+P   HYS M
Sbjct: 452 EAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCM 511

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           IDL+ RSG++EEAM FI  MP  PD+  W  LL+ACR  GN+++   A E L +L+P   
Sbjct: 512 IDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHP 571

Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
               L+  IYA  GK +   ++R+  +E   R   GQ WI+ K  +++F     S  YSD
Sbjct: 572 AGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHSFSADDESSPYSD 631

Query: 764 LLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALI-GSSQAPH 817
            +Y+ L+ + + +        +S     +EE  K ++   HSE+LA+AF LI   S  P 
Sbjct: 632 QIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNCHSERLAIAFGLIFVPSGLP- 690

Query: 818 TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            IR+ KN+R+CV CH   K++S +   EI + D+   H FK+G CSCGD+W
Sbjct: 691 -IRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 740



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 132/528 (25%), Positives = 237/528 (44%), Gaps = 87/528 (16%)

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           + + ++F    LL  Y+K G L +    FE + +R+  TW+ +I  YS        V+ +
Sbjct: 64  IPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY 123

Query: 146 FLMVQDGLFPDDF---LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
             M++D  F  +        +L+   + G    GK +H  VIKLG      V + +L +Y
Sbjct: 124 NTMMKD--FSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMY 181

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
            K G +  A++ F  +D+++ V +N+++ G    G  ++A +LF  M ++      V+++
Sbjct: 182 SKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDS-----VSWS 236

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            +I+   Q                                   NG   +A++ F+EM   
Sbjct: 237 AMIKGLAQ-----------------------------------NGMEKEAIECFREMKIE 261

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           G+  +     S + AC  L A+  G +IH+  ++    D + VG++LI+MY KC+ L  A
Sbjct: 262 GLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYA 321

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN-------------- 428
           + VFD +K K+V SW +M+ GY Q G  G+A ++F+ MQ S + P+              
Sbjct: 322 KTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANI 381

Query: 429 ---------------------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTAS 467
                                +   N L++ Y + G+ D++  LF  M   D+V     S
Sbjct: 382 SSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEV-----S 436

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           W ++++ Y Q G+   A+ +F KM      P+ VT+  V+ AC+      K +     ++
Sbjct: 437 WTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMI 496

Query: 528 RR-SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLI 573
               +  S    + +ID +++SG I  +    +GM  + D I W +L+
Sbjct: 497 NEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLL 544



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 165/318 (51%), Gaps = 5/318 (1%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
           L  NG   EAI     +  +G K+ +  + ++L AC    +I+  R++HA  +    +  
Sbjct: 242 LAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDH 301

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           ++V + L+ +Y KC CL  A+ VF+ M+++N+ +W+AM+  Y +  R  E V++F  M +
Sbjct: 302 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQR 361

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G+ PD +   + + AC N    E G   H   I  G+     V NS++ +Y KCG +  
Sbjct: 362 SGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDD 421

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           + R F  M+ +D V+W +M+S Y Q G   EA +LFDKM +  +K   VT   +I + ++
Sbjct: 422 STRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSR 481

Query: 271 LGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G  +      + M    GI P    ++CMI  F+++GR  +A+     M F    P+ +
Sbjct: 482 AGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPF---RPDAI 538

Query: 330 TITSAISACTDLKALAMG 347
             T+ +SAC +   L +G
Sbjct: 539 GWTTLLSACRNKGNLEIG 556



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 214/487 (43%), Gaps = 79/487 (16%)

Query: 53  AKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAR 111
           + + R T + +L+    +  + L +++H   + L  E  + V + LL +Y+K GC+ DA+
Sbjct: 132 SNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAK 191

Query: 112 EVFEDMRERN--LY----------------------------TWSAMIGAYSRDQRWREV 141
           +VF  + +RN  +Y                            +WSAMI   +++   +E 
Sbjct: 192 KVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEA 251

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
           +E F  M  +GL  D + F  +L ACG  G    G+ +H+ +I+  +     V ++++ +
Sbjct: 252 IECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDM 311

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR---------- 251
           Y KC  L +A+  F+ M +K+ V+W +M+ GY Q G   EA ++F  M R          
Sbjct: 312 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTL 371

Query: 252 ---------------------EEIKLGVVTF----NILIRSYNQLGQCDVAMEMVKRMES 286
                                + I  G++ +    N L+  Y + G  D +  +   M  
Sbjct: 372 GQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMN- 430

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
                D  +WT M+S +AQ GR  +A+ LF +M  +G+ P+GVT+T  ISAC+    +  
Sbjct: 431 ---VRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEK 487

Query: 347 GMEIHSLAV-KMGFTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAGY 404
           G     L + + G        + +I+++S+   +E A    + M    D   W ++++  
Sbjct: 488 GQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSAC 547

Query: 405 CQAG--YCGK-AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
              G    GK A E  I++     P +   + +L S Y   G  D    L + M + +  
Sbjct: 548 RNKGNLEIGKWAAESLIELD----PHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVR 603

Query: 462 KRNTASW 468
           K    SW
Sbjct: 604 KEPGQSW 610



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 166/413 (40%), Gaps = 106/413 (25%)

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           ++ I  C  L A      IH   ++     +  + N++++ Y+       A RVFD I  
Sbjct: 7   SAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQ 66

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
            +++SWN+++  Y ++G+  +    F K+ + D     +TWNVLI GY  +G    AV  
Sbjct: 67  PNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRD----GVTWNVLIEGYSLSGLVGAAVKA 122

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC--VTILSVLPA 509
           +  M K+                                     F  N   VT++++L  
Sbjct: 123 YNTMMKD-------------------------------------FSSNLTRVTLMTMLKL 145

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS------- 562
            +     +  K+IHG V++   ES L V + L+D Y+K G I  ++ +F G+        
Sbjct: 146 SSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMY 205

Query: 563 -----------------------SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
                                   KD ++W+++I G   +G    A++ F +MK  GLK 
Sbjct: 206 NTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKM 265

Query: 600 NRGTFLSIILAHSLAGMVDLGKKVFCSITEC------YQIIPMIEHY------------- 640
           ++  F S++ A    G ++ G+++   I         Y    +I+ Y             
Sbjct: 266 DQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVF 325

Query: 641 -----------SAMIDLYGRSGKLEEAMEFIEDMP---IEPDSSIWEALLTAC 679
                      +AM+  YG++G+  EA++   DM    I+PD       ++AC
Sbjct: 326 DRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISAC 378


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  322 bits (824), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 198/620 (31%), Positives = 325/620 (52%), Gaps = 39/620 (6%)

Query: 287 LGITPDVFT--WTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKA 343
           LG  P + T  +  ++      G    AL LF EM     V P+  T+  A+ +C+ +  
Sbjct: 75  LGPRPPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCT 134

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           L +G  I + AVK G   D  V +SLI+MY+ C ++ AA+ +FD +++  V  WN++I  
Sbjct: 135 LDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITA 194

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS---------------------GYIQN 442
           Y + G   +  E+F  M E  V  + IT   +++                     G ++N
Sbjct: 195 YMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRN 254

Query: 443 GNEDEA-VDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
            N   A +D++ + G+  K +R        +  +W+++I+GY Q  Q   AL +F +MQ 
Sbjct: 255 RNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQL 314

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
           +   PN VT++SVL ACA L A    K +H  + R+ L  ++ +  +L+D YAK G I  
Sbjct: 315 AEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDD 374

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           +   F+ M  K+  TW +LI G   +G    AL+LF  M+   ++P   TF+ +++A S 
Sbjct: 375 AVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSH 434

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           + +V+ G++ F S+T+ Y I P  EHY  ++DL GR+G ++EA +FI  MPIEP++ IW 
Sbjct: 435 SCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWR 494

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
           ALL++C +H N+++   A++++  L P       L+  IYA  G+ ++A  +RK  ++  
Sbjct: 495 ALLSSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRG 554

Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT-----ARSSHSGLCIE 788
              + G   IE+  +V  F            +Y  ++ + + +        ++   L ++
Sbjct: 555 IEKTPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVD 614

Query: 789 EEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFL 848
           E EKE     HSEKLA+AF L+       TIR+ KN+R+C  CH   K +S +++ EI +
Sbjct: 615 EHEKEVSVSHHSEKLAIAFGLMKLDPGA-TIRLSKNLRVCTDCHSATKLISKVYNREIVV 673

Query: 849 ADSKCLHHFKNGQCSCGDYW 868
            D    HHFK+G CSC DYW
Sbjct: 674 RDRNRFHHFKDGTCSCNDYW 693



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 123/485 (25%), Positives = 211/485 (43%), Gaps = 77/485 (15%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           ++T    L++C    ++ + R + A+ +      D FV + L+ +YA C  +  A+ +F+
Sbjct: 119 QHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFD 178

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            + E  +  W+A+I AY ++  W EVVE+F  M++ G+  D+     ++ ACG  GD + 
Sbjct: 179 AVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKL 238

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           GK +   V + G+   R +  +++ +Y KCG+L  ARR F+ M  +D VAW++MISGY Q
Sbjct: 239 GKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQ 298

Query: 236 IGENDEAHRLFDKM------------------C-----------------REEIKLGVVT 260
             +  EA  LF +M                  C                 R+ + L ++ 
Sbjct: 299 ADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIIL 358

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
              L+  Y + G  D A+E  + M       + +TWT +I G A NGR  +AL+LF  M 
Sbjct: 359 GTALVDFYAKCGCIDDAVEAFESMP----VKNSWTWTALIKGMATNGRGREALELFSSMR 414

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
              + P  VT    + AC+           HS  V+ G        +S+   Y      E
Sbjct: 415 KASIEPTDVTFIGVLMACS-----------HSCLVEEGRRH----FDSMTQDYGIKPRAE 459

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
               V D++                +AG   +AY+    M    + PN + W  L+S   
Sbjct: 460 HYGCVVDLLG---------------RAGLIDEAYQFIRTMP---IEPNAVIWRALLSSCA 501

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF--YP 498
            + N +   +  +++   +    ++  +  L   Y  +GQ  NA  + ++M+       P
Sbjct: 502 VHKNVEIGEEALKQIVSLN--PSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTP 559

Query: 499 NCVTI 503
            C  I
Sbjct: 560 GCSLI 564



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 181/408 (44%), Gaps = 43/408 (10%)

Query: 140 EVVELFFLMVQ-DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV 198
           + + LF  M+    + PD       L++C      + G+ + +  +K G+   R V +S+
Sbjct: 101 DALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSL 160

Query: 199 LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR-----EE 253
           + +Y  C  +  A+  F++++E   V WN++I+ Y + G   E   +F  M       +E
Sbjct: 161 IHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDE 220

Query: 254 IKL-GVVT-----------------------------FNILIRSYNQLGQCDVAMEMVKR 283
           I L  VVT                                LI  Y + G+   A  +   
Sbjct: 221 ITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDG 280

Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
           M+S     DV  W+ MISG+ Q  +  +AL LF EM    V PN VT+ S +SAC  L A
Sbjct: 281 MQSR----DVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGA 336

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           L  G  +HS   +   +  +++G +L++ Y+KC  ++ A   F+ +  K+ ++W ++I G
Sbjct: 337 LETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKG 396

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
               G   +A ELF  M+++ + P  +T+  ++     +   +E    F  M ++  +K 
Sbjct: 397 MATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKP 456

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
               +  ++    + G  + A    R M      PN V   ++L +CA
Sbjct: 457 RAEHYGCVVDLLGRAGLIDEAYQFIRTMP---IEPNAVIWRALLSSCA 501


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  322 bits (824), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 203/619 (32%), Positives = 314/619 (50%), Gaps = 48/619 (7%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           DV TW  M+  F  +    +AL  + EM      +P+  T  S +  C  L    +G  +
Sbjct: 42  DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H   VK     D+ +  +L+NMY+ C +L++A  +F+ +  ++   W SMI+GY +    
Sbjct: 102 HGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKNHCP 161

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISG-------------------------------- 438
            +A  L+ KM+E    P+ +T   L+S                                 
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221

Query: 439 ---YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS-S 494
              Y + G+   A  +F ++   D       +W++LI GY +  +   AL +FR++   S
Sbjct: 222 VNMYAKCGDLKTARQVFDQLSDKD-----VYAWSALIFGYVKNNRSTEALQLFREVAGGS 276

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
              PN VTIL+V+ ACA L      + +H  + R     S+ + NSLID ++K G+I  +
Sbjct: 277 NMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAA 336

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
           + IFD MS KD+I+WNS++ G  LHG    AL  F  M++  L+P+  TF+ ++ A S A
Sbjct: 337 KRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHA 396

Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
           G+V  GKK+F  I   Y +    EHY  M+DL  R+G L EA EFI  MP++PD +IW +
Sbjct: 397 GLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGS 456

Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
           +L ACR++ N++L   A   L +LEP +  +  L+  IYA      +  KVR+L  E   
Sbjct: 457 MLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGI 516

Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEE 789
           + + G   + + N+ ++F+ G  S      +   L+ V E +      A +S   L I++
Sbjct: 517 QKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLKLVGYVADTSEVLLNIDD 576

Query: 790 EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
            +KEE    HSEKLAL + L+  S+    I I+KN+R+C  CH   K VS ++  +I L 
Sbjct: 577 NKKEESVSQHSEKLALCYGLL-KSEIGGRIVILKNLRVCSDCHTLIKLVSKIYQRQITLR 635

Query: 850 DSKCLHHFKNGQCSCGDYW 868
           D    HHFK+G CSC DYW
Sbjct: 636 DRNRFHHFKDGSCSCRDYW 654



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 183/376 (48%), Gaps = 33/376 (8%)

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL-FPDDFLFPKILQACG 168
           A  VF   R  ++ TW++M+ A+      R  ++ +  M++     PD F FP +L+ C 
Sbjct: 31  AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
              +F+ GK++H  V+K  +     +  ++L +Y  CG L  AR  FE M  ++ V W S
Sbjct: 91  LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTS 150

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
           MISGY +    +EA  L+ KM  +      VT   L+ +  +L    V M++   +  + 
Sbjct: 151 MISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMD 210

Query: 289 IT-------------------------------PDVFTWTCMISGFAQNGRTSQALDLFK 317
           +                                 DV+ W+ +I G+ +N R+++AL LF+
Sbjct: 211 MKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFR 270

Query: 318 EMSFVGVM-PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
           E++    M PN VTI + ISAC  L  L  G  +H    +      V + NSLI+M+SKC
Sbjct: 271 EVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKC 330

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
            +++AA+R+FD +  KD+ SWNSM+ G    G   +A   F  MQ +D+ P+ IT+  ++
Sbjct: 331 GDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVL 390

Query: 437 SGYIQNGNEDEAVDLF 452
           +     G   E   LF
Sbjct: 391 TACSHAGLVQEGKKLF 406



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 179/359 (49%), Gaps = 7/359 (1%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN-LVTEIDVFVKTKL 97
           NEA+ +   +   G      T   L+ AC +   + +  KLH+ +  +  +I   + + L
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ-DGLFPD 156
           +++YAKCG L  AR+VF+ + ++++Y WSA+I  Y ++ R  E ++LF  +     + P+
Sbjct: 222 VNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPN 281

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           +     ++ AC   GD E G+ +H  + +        + NS++ ++ KCG +  A+R F+
Sbjct: 282 EVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKRIFD 341

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
           SM  KD ++WNSM++G    G   EA   F  M   +++   +TF  ++ + +  G    
Sbjct: 342 SMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQE 401

Query: 277 AMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
             ++   +E+L G+      + CM+    + G  ++A +  + M    + P+G    S +
Sbjct: 402 GKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMP---LQPDGAIWGSML 458

Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
            AC     L +G E     +++  T+D  V   L N+Y++ +     ++V +++ +K +
Sbjct: 459 GACRVYNNLELGEEAARCLLELEPTNDG-VYILLSNIYARRKMWNEVKKVRELMNEKGI 516



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 146/320 (45%), Gaps = 41/320 (12%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           R T+ +LL+ C       + + LH   +  +   D++++T LL++YA CG L  AR +FE
Sbjct: 79  RFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFE 138

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            M  RN   W++MI  Y ++    E + L+  M +DG  PD+     ++ AC    D   
Sbjct: 139 RMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGV 198

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +HS + ++ M     + ++++ +Y KCG L  AR+ F+ + +KD  AW+++I GY +
Sbjct: 199 GMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVK 258

Query: 236 IGENDEAHRLF------------------------------------DKMCREEIKLGVV 259
              + EA +LF                                    D + R +    V 
Sbjct: 259 NNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVS 318

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
             N LI  +++ G  D A  +   M       D+ +W  M++G A +G   +AL  F  M
Sbjct: 319 LNNSLIDMFSKCGDIDAAKRIFDSMS----YKDLISWNSMVNGLALHGLGREALAQFHLM 374

Query: 320 SFVGVMPNGVTITSAISACT 339
               + P+ +T    ++AC+
Sbjct: 375 QTTDLQPDEITFIGVLTACS 394



 Score = 40.0 bits (92), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 67/146 (45%), Gaps = 5/146 (3%)

Query: 536 PVMNSLIDTYAKSGN--IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
           P +N LI      G+  + Y+ ++F      D++TWNS++  +V       AL  + +M 
Sbjct: 11  PSLNKLIAHVLSMGSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEML 70

Query: 594 SFGLK-PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
                 P+R TF S++   +L     +GK +   + + Y +   +   + ++++Y   G 
Sbjct: 71  ERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVK-YMLHSDLYIETTLLNMYAACGD 129

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTA 678
           L+ A    E M    +  +W ++++ 
Sbjct: 130 LKSARFLFERMG-HRNKVVWTSMISG 154


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  322 bits (824), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 188/562 (33%), Positives = 297/562 (52%), Gaps = 48/562 (8%)

Query: 349 EIHSLAVKMG--FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
           +IH+ +++ G   T+  +    +  + S C  +  A ++F  I++ ++++WN+MI GY +
Sbjct: 58  QIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAE 117

Query: 407 AGYCGKAYELFIKMQESDVPPNVITW---------------------------------- 432
           +     A EL+ +M  S + P+  T+                                  
Sbjct: 118 SENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFV 177

Query: 433 -NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            N L+  Y   G+ + A  LF+ M +     RN  +WNS+I GY   G+ N AL +FR+M
Sbjct: 178 QNTLVHMYAACGHAESAHKLFELMAE-----RNLVTWNSVINGYALNGRPNEALTLFREM 232

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
                 P+  T++S+L ACA L A    +  H  +++  L+ +L   N+L+D YAK G+I
Sbjct: 233 GLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSI 292

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             +  +FD M  K +++W SLI G  ++GF   AL+LF +++  GL P+  TF+ ++ A 
Sbjct: 293 RQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYAC 352

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
           S  GMVD G   F  + E Y I+P IEHY  M+DL GR+G +++A EFI++MP++P++ +
Sbjct: 353 SHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVV 412

Query: 672 WEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
           W  LL AC IHG++ L  +A  +L  LEP       L+  +YA   +  D  KVR+    
Sbjct: 413 WRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLR 472

Query: 732 NTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP-----ENVTARSSHSGLC 786
              + + G   +E++N ++ FV G  S   ++ +Y  L  +      E      S+    
Sbjct: 473 EGVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLAD 532

Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
           IEEEEKE     HSEK+A+AF LI ++ A   IR+VKN+R+C  CH   K +S +   EI
Sbjct: 533 IEEEEKETALSYHSEKIAIAFMLINTA-AGIPIRVVKNLRVCADCHLAIKLISKVFDREI 591

Query: 847 FLADSKCLHHFKNGQCSCGDYW 868
            + D    HHFK+G CSC DYW
Sbjct: 592 VVRDRSRFHHFKDGHCSCKDYW 613



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 147/292 (50%), Gaps = 5/292 (1%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           +TY  LL+A      +    K+H+  +    E  VFV+  L+ +YA CG  + A ++FE 
Sbjct: 141 HTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFEL 200

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M ERNL TW+++I  Y+ + R  E + LF  M   G+ PD F    +L AC   G    G
Sbjct: 201 MAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALG 260

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           +  H  ++K+G+       N++L +Y KCG +  A + F+ M+EK  V+W S+I G    
Sbjct: 261 RRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVN 320

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFT 295
           G   EA  LF ++ R+ +    +TF  ++ + +  G  D   +  KRM E  GI P +  
Sbjct: 321 GFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEH 380

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
           + CM+    + G   QA +  + M    + PN V   + + ACT    LA+G
Sbjct: 381 YGCMVDLLGRAGLVKQAHEFIQNMP---MQPNAVVWRTLLGACTIHGHLALG 429



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 158/341 (46%), Gaps = 42/341 (12%)

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--------------- 249
           C  + +A + F  +   +   WN+MI GY +      A  L+ +M               
Sbjct: 87  CSPMSYAHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFL 146

Query: 250 ---------CREEIKLGVVTF-----------NILIRSYNQLGQCDVAMEMVKRMESLGI 289
                     RE  K+  +             N L+  Y   G  + A ++ + M     
Sbjct: 147 LKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAER-- 204

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
             ++ TW  +I+G+A NGR ++AL LF+EM   GV P+G T+ S +SAC +L ALA+G  
Sbjct: 205 --NLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRR 262

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
            H   VK+G   ++  GN+L+++Y+KC  +  A +VFD +++K V SW S+I G    G+
Sbjct: 263 AHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGF 322

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
             +A ELF +++   + P+ IT+  ++      G  DE  D F+RM +   +      + 
Sbjct: 323 GKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYG 382

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            ++     LG+          +Q+    PN V   ++L AC
Sbjct: 383 CMV---DLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGAC 420



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 150/318 (47%), Gaps = 46/318 (14%)

Query: 61  INLLQACIDSNSIHLARKLHAFL----NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           I LL +C  ++S    R++HAF       +T  D+  K  + ++ + C  +  A ++F  
Sbjct: 43  IALLLSC--ASSKFKFRQIHAFSIRHGVPLTNPDMG-KYLIFTLLSFCSPMSYAHQIFSQ 99

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           ++  N++TW+ MI  Y+  +     +EL+  M    + PD   +P +L+A     D   G
Sbjct: 100 IQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREG 159

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           + +HS+ I+ G   +  V+N+++ +Y  CG    A + FE M E++ V WNS+I+GY   
Sbjct: 160 EKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALN 219

Query: 237 GENDEAHRLFDKM------------------CRE-------------EIKLG----VVTF 261
           G  +EA  LF +M                  C E              +K+G    +   
Sbjct: 220 GRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAG 279

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N L+  Y + G    A ++   ME       V +WT +I G A NG   +AL+LFKE+  
Sbjct: 280 NALLDLYAKCGSIRQAHKVFDEMEE----KSVVSWTSLIVGLAVNGFGKEALELFKELER 335

Query: 322 VGVMPNGVTITSAISACT 339
            G+MP+ +T    + AC+
Sbjct: 336 KGLMPSEITFVGVLYACS 353



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 112/219 (51%), Gaps = 8/219 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFV 93
           NGR NEA+T+   +  +G +    T ++LL AC +  ++ L R+ H ++  V  + ++  
Sbjct: 219 NGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHA 278

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              LL +YAKCG +  A +VF++M E+++ +W+++I   + +   +E +ELF  + + GL
Sbjct: 279 GNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGL 338

Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            P +  F  +L AC +CG  + G      +  + G+         ++ +  + G +  A 
Sbjct: 339 MPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAH 398

Query: 213 RFFESMD-EKDGVAWNSM-----ISGYFQIGENDEAHRL 245
            F ++M  + + V W ++     I G+  +GE   A  L
Sbjct: 399 EFIQNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLL 437



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/260 (22%), Positives = 116/260 (44%), Gaps = 42/260 (16%)

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS--LIDTYAKSGNIVYSRTIFDGM 561
           +++L +CA   +  K ++IH   +R  +  + P M    +    +    + Y+  IF  +
Sbjct: 43  IALLLSCA--SSKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQI 100

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL-- 619
            + +I TWN++I GY        AL+L+ QM    ++P+  T+  ++ A  +A ++D+  
Sbjct: 101 QNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKA--IAKLMDVRE 158

Query: 620 GKKVFC-SITECYQIIPMIEH-----------------------------YSAMIDLYGR 649
           G+KV   +I   ++ +  +++                             ++++I+ Y  
Sbjct: 159 GEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYAL 218

Query: 650 SGKLEEAMEFIEDM---PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE-PGDVLI 705
           +G+  EA+    +M    +EPD     +LL+AC   G + L   A   +  +   G++  
Sbjct: 219 NGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHA 278

Query: 706 QRLILQIYAICGKPEDALKV 725
              +L +YA CG    A KV
Sbjct: 279 GNALLDLYAKCGSIRQAHKV 298


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 215/808 (26%), Positives = 379/808 (46%), Gaps = 96/808 (11%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           R T+ ++ Q C +  ++   ++ HA + L      VFV   L+ +Y KC  L+ A +VFE
Sbjct: 24  RKTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFE 83

Query: 116 DMRERNLYTWSAM--------------------------------IGAYSRDQRWREVVE 143
           +M +R++ +W+ M                                I  Y ++   ++ + 
Sbjct: 84  EMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIA 143

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           +F  M   G+  D       L+ C    D   G  +H + +++G        ++++ +Y 
Sbjct: 144 VFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYA 203

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           KC  L  +   F  + +K+ ++W++ I+G  Q  +     +LF +M R+ I +   T+  
Sbjct: 204 KCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYAS 263

Query: 264 LIRS-----YNQLG---------------------------QCDVAMEMVKRMESLGITP 291
           + RS      ++LG                           +CD  M    ++ SL    
Sbjct: 264 VFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCD-NMSDAYKLFSLLPDH 322

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           ++ ++  MI G+A+N +  QA  LF ++       + V+++ A+SA   +K  + G+++H
Sbjct: 323 NLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLH 382

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
            LA+K   + ++ V N++++MY KC  L  A  +FD ++ +D  SWN++I    Q    G
Sbjct: 383 GLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEG 442

Query: 412 KAYELFIKMQESDVPPNVITWNVLISG-----YIQNGNE-----------------DEAV 449
           K    F  M  S + P+  T+  ++          NG E                    V
Sbjct: 443 KTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALV 502

Query: 450 DLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
           D++ + G  ++ ++           SWN++I+G+    +  ++   F  M      P+  
Sbjct: 503 DMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNF 562

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
           T  +VL  CA L      K+IH  +++  L S + + ++L+D Y+K GN+  S  +F   
Sbjct: 563 TYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKA 622

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
             +D +TWN++ICG+  HG    AL+LF+ M    +KPN  TF+S++ A S  G    G 
Sbjct: 623 PKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGL 682

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
             F  +   Y + P +EHYS M+D+ GRSG++EEA+  I+DMP E D+ IW  LL+ C+I
Sbjct: 683 FYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKI 742

Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
            GN+++A  A   L  L+P D     L+  IYA  G  +   K+R+  R +  +   G  
Sbjct: 743 QGNVEVAEKAASSLLKLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCS 802

Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWL 769
           WIEVK+ V+TF+    +    +++YS L
Sbjct: 803 WIEVKDEVHTFLVCDKAHPKCEMIYSLL 830



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/513 (23%), Positives = 236/513 (46%), Gaps = 45/513 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVF 92
           N +L   + +   +  +G  V ++TY ++ ++C   ++  L  +LH    L T+   DV 
Sbjct: 236 NDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHA-LKTDFGSDVI 294

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V T  L +YAKC  + DA ++F  + + NL +++AMI  Y+R+++  +  +LF  + ++ 
Sbjct: 295 VGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNS 354

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
              D+      L A         G  +H L IK  +S    V N++L +Y KCG L+ A 
Sbjct: 355 FSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEAS 414

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS----- 267
             F+ M+ +D V+WN++I+   Q     +    F  M R +++    T+  ++++     
Sbjct: 415 GLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQR 474

Query: 268 ------------------------------YNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                         Y++ G  + A ++  R+E       + +W 
Sbjct: 475 AFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEE----QTMVSWN 530

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            +ISGF+   ++  +   F  M  +GV P+  T  + +  C +L  + +G +IH+  +K+
Sbjct: 531 AIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKL 590

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
               DV + ++L++MYSKC  +  +  +F     +D  +WN+MI G+   G   +A ELF
Sbjct: 591 ELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEEALELF 650

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
             M   ++ PN  T+  ++      GN  + +  FQ+M     ++     ++ ++    +
Sbjct: 651 EHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGR 710

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            GQ   AL   R +Q   F  + +   ++L  C
Sbjct: 711 SGQVEEAL---RLIQDMPFEADAIIWRTLLSIC 740



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 138/609 (22%), Positives = 262/609 (43%), Gaps = 76/609 (12%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG + ++I V   +   G      T    L+ C       L  ++H   + +  + DV  
Sbjct: 135 NGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVT 194

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + L+ +YAKC  L+D+ +VF ++ ++N  +WSA I    ++ +    ++LF  M + G+
Sbjct: 195 GSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGI 254

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
                 +  + ++C        G  +H   +K        V  + L +Y KC  +  A +
Sbjct: 255 GVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYK 314

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR-----EEIKL-GVVTFNILIRS 267
            F  + + +  ++N+MI GY +  +  +A +LF ++ +     +E+ L G ++   +I+ 
Sbjct: 315 LFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKG 374

Query: 268 YNQ--------------------------LGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
           +++                           G+C   +E     + + I  D  +W  +I+
Sbjct: 375 HSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIR-DPVSWNAIIT 433

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
              QN    + L  F  M    + P+  T  S + AC   +A + GME+H   +K G   
Sbjct: 434 ACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGL 493

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
            + VG++L++MYSKC  +E AE++   ++++ + SWN++I+G+        +   F  M 
Sbjct: 494 KMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHML 553

Query: 422 ESDVPPNVITW-----------------------------------NVLISGYIQNGNED 446
           E  V P+  T+                                   + L+  Y + GN  
Sbjct: 554 EMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMH 613

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           +++ +F++  K D V     +WN++I G+   G    AL +F  M      PN  T +SV
Sbjct: 614 DSLLMFRKAPKRDSV-----TWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSV 668

Query: 507 LPACAYLVASNK-VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS-RTIFDGMSSK 564
           L AC+++  + K +          +LE  L   + ++D   +SG +  + R I D     
Sbjct: 669 LRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEA 728

Query: 565 DIITWNSLI 573
           D I W +L+
Sbjct: 729 DAIIWRTLL 737


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 191/570 (33%), Positives = 300/570 (52%), Gaps = 37/570 (6%)

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           S I+AC   ++L     IH+      F   V + NSLI++Y KC  +  A RVFD +  +
Sbjct: 69  SLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGMPAR 128

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI--SGYIQNGNEDEAV- 449
           D+ SW S+IAGY Q     +A  L   M      PN  T+  L+  +G   +    E + 
Sbjct: 129 DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIH 188

Query: 450 -------------------DLFQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKN 482
                              D++ R G+ D           +N  SWN+LIAG+ + G   
Sbjct: 189 ALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGE 248

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
             L +F +MQ + F     T  SV  A A + A  + K +H  +++     S  V N+++
Sbjct: 249 TTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTIL 308

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
           D YAKSG+++ +R +FD +  KD++TWNS++  +  +G    A+  F++M+  G+  N+ 
Sbjct: 309 DMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQI 368

Query: 603 TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           TFLSI+ A S  G+V  GK+ F  + E Y + P I+HY  ++DL GR+G L +A+ FI  
Sbjct: 369 TFLSILTACSHGGLVKEGKQYFDMMKE-YNLEPEIDHYVTVVDLLGRAGLLNDALVFIFK 427

Query: 663 MPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDA 722
           MP++P +++W ALL +CR+H N  +   A + +F+L+P D     L+  IYA  G+ + A
Sbjct: 428 MPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQWDAA 487

Query: 723 LKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY-SW----LQNVPENVT 777
            +VRK+ +    +      W+E++N V+ FV    +   S+ +Y  W    +Q       
Sbjct: 488 ARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKAGYV 547

Query: 778 ARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKY 837
             + +  L ++E+E++     HSEK+ALAFALI       TIRI+KNIR+C  CH   +Y
Sbjct: 548 PNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGA-TIRIMKNIRICGDCHSAFRY 606

Query: 838 VSMMHHCEIFLADSKCLHHFKNGQCSCGDY 867
           +S +   EI + D+   HHF +G CSCGDY
Sbjct: 607 ISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 209/463 (45%), Gaps = 44/463 (9%)

Query: 44  VLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYA 102
            LDS+  +        Y +L+ AC    S+  AR +HA L        VF+   L+ +Y 
Sbjct: 51  TLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYC 110

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
           KCG + DAR VF+ M  R++ +W+++I  Y+++    E + L   M++    P+ F F  
Sbjct: 111 KCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFAS 170

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           +L+A G       G+ +H+L +K        V +++L +Y +CG++  A   F+ ++ K+
Sbjct: 171 LLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKN 230

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD----VAM 278
           GV+WN++I+G+ + G+ +    +F +M R   +    T++ +  +   +G  +    V  
Sbjct: 231 GVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHA 290

Query: 279 EMVKRMESLGI---------------------------TPDVFTWTCMISGFAQNGRTSQ 311
            M+K  E L                               DV TW  M++ FAQ G   +
Sbjct: 291 HMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGRE 350

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           A+  F+EM   GV  N +T  S ++AC+    +  G +   +  +     ++    ++++
Sbjct: 351 AVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVD 410

Query: 372 MYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK----AYELFIKMQESDVP 426
           +  +   L +A   +F M        W +++ G C+     K    A +   ++   D  
Sbjct: 411 LLGRAGLLNDALVFIFKMPMKPTAAVWGALL-GSCRMHKNAKIGQFAADHVFELDPDDTG 469

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
           P V+ +N+    Y   G  D A  + ++M K   VK+  A SW
Sbjct: 470 PPVLLYNI----YASTGQWDAAARV-RKMMKATGVKKEPACSW 507



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 170/361 (47%), Gaps = 5/361 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N   +EA+ +L  +     K    T+ +LL+A   S S  +  ++HA  +      DV+V
Sbjct: 143 NDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYV 202

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + LL +YA+CG +D A  VF+ +  +N  +W+A+I  ++R       + +F  M ++G 
Sbjct: 203 GSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGF 262

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
               F +  +  A    G  E GK +H+ +IK G      V N++L +Y K G +I AR+
Sbjct: 263 EATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARK 322

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ +D+KD V WNSM++ + Q G   EA   F++M +  + L  +TF  ++ + +  G 
Sbjct: 323 VFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGL 382

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
                +    M+   + P++  +  ++    + G  + AL    +M    + P      +
Sbjct: 383 VKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVFIFKMP---MKPTAAVWGA 439

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            + +C   K   +G        ++   DD      L N+Y+   + +AA RV  M+K   
Sbjct: 440 LLGSCRMHKNAKIGQFAADHVFELD-PDDTGPPVLLYNIYASTGQWDAAARVRKMMKATG 498

Query: 394 V 394
           V
Sbjct: 499 V 499



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 189/429 (44%), Gaps = 51/429 (11%)

Query: 212 RRFFESMDEKDGVA----WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           R   +S+D ++  A    ++S+I+   +    D+A  +   +   +    V   N LI  
Sbjct: 49  RDTLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHL 108

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           Y + G    A  +   M +     D+ +WT +I+G+AQN    +AL L   M      PN
Sbjct: 109 YCKCGAVADARRVFDGMPAR----DMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPN 164

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
           G T  S + A     +  +G +IH+L VK  + DDV VG++L++MY++C  ++ A  VFD
Sbjct: 165 GFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFD 224

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------------- 432
            ++ K+  SWN++IAG+ + G       +F +MQ +       T+               
Sbjct: 225 QLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQ 284

Query: 433 --------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                               N ++  Y ++G+  +A  +F R+ K D V     +WNS++
Sbjct: 285 GKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVV-----TWNSML 339

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
             + Q G    A+  F +M+    + N +T LS+L AC++     + K+    +   +LE
Sbjct: 340 TAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLE 399

Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT-WNSLICGYVLHGFWHAALDLFDQ 591
             +    +++D   ++G +  +      M  K     W +L+    +H   +A +  F  
Sbjct: 400 PEIDHYVTVVDLLGRAGLLNDALVFIFKMPMKPTAAVWGALLGSCRMHK--NAKIGQFAA 457

Query: 592 MKSFGLKPN 600
              F L P+
Sbjct: 458 DHVFELDPD 466



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 139/299 (46%), Gaps = 7/299 (2%)

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMG 456
           ++S+I    +      A  +   +  S    +V   N LI  Y + G   +A  +F  M 
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGM- 125

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
                 R+  SW SLIAGY Q    + ALG+   M    F PN  T  S+L A     +S
Sbjct: 126 ----PARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASS 181

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
              ++IH   ++      + V ++L+D YA+ G +  +  +FD + SK+ ++WN+LI G+
Sbjct: 182 GIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGF 241

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
              G     L +F +M+  G +    T+ S+  A +  G ++ GK V   + +  + +  
Sbjct: 242 ARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSA 301

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
               + ++D+Y +SG + +A + + D   + D   W ++LTA   +G    AV   E +
Sbjct: 302 FVG-NTILDMYAKSGSMIDARK-VFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEM 358


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 248/911 (27%), Positives = 406/911 (44%), Gaps = 115/911 (12%)

Query: 58  NTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
            T   LL+ CI    +   R+LH   +      +  +   L+ +Y+KC  LDDA   F  
Sbjct: 25  ETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSA 84

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD---- 172
           +R R + TW+ +I A S      ++     L  +    P+      +L A  + GD    
Sbjct: 85  LRSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNKLTIIAVLGAIAS-GDPSSS 143

Query: 173 -------FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA 225
                      +++H  +    +     V  ++L  Y KCG +  A   F  +   D + 
Sbjct: 144 SSSRAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLIC 203

Query: 226 WNSMISGYFQIGEN-DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           WN+ I       E  D A  L  +M  E +     +F  ++ S        +A  +  R+
Sbjct: 204 WNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARV 263

Query: 285 ESLGITPDVF-------------------------------TWTCMISGFAQNGRTSQAL 313
           E LG   DV                                +W  MI+ FAQ G  S A 
Sbjct: 264 EELGFLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAF 323

Query: 314 DLFKEMSFVGVMPNGVTITSAISACTDLKALAMG--MEIHSLAVKMGFTDDVLVGNSLIN 371
            ++  M   G  PN +T  +A+ A     +  +G    +H      G   DV+VG +L+ 
Sbjct: 324 AIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVT 383

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
           MY     ++ A   FD I  K++ SWN+M+  Y   G   +A ELF  M+   + PN ++
Sbjct: 384 MYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVS 443

Query: 432 W---------------------------------NVLISGYIQNGNEDEAVDLFQRMGKN 458
           +                                 N ++  + ++G+ +EAV  F     +
Sbjct: 444 YLAVLGCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVAAF-----D 498

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL----V 514
             V +++ SWN+ +A        + A+  F  MQ   F P+  T++SV+  CA L    +
Sbjct: 499 ATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLEL 558

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS-RTIFDGMSS--KDIITWNS 571
             +  +++   +    +E  + V +++++  AK G+ V     +F  M    KD++ WN+
Sbjct: 559 GRSIQQQLSAAI---EVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNT 615

Query: 572 LICGYVLHGFWHAALDLFDQMKS-FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC 630
           +I  Y  HG    AL LF  M+    ++P+  TF+S++   S AG+V+ G   F    E 
Sbjct: 616 MIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREV 675

Query: 631 YQIIPM-IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
             I    +EHY+ ++D+ GR G L EA +FI  MP+  DS +W +LL AC  +G+++   
Sbjct: 676 LGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGE 735

Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK-LERENTRRNSFGQCWIEVKNL 748
            A     +L   D +   ++  IYA  G+ ED+++VR+ +     ++   G+  I VKN 
Sbjct: 736 RAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNR 795

Query: 749 VYTFVTGGWSESYSDLLYSWLQN----------VPENVTARSSHSGLCIEEEEKEEISGI 798
           V+ F     S   SD +Y+ L+           VP+  T    H    +EEE+KE++   
Sbjct: 796 VHEFFARDRSHPQSDAIYAELERLKGLIREAGYVPD--TRLVLHD---VEEEQKEQLLWY 850

Query: 799 HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF- 857
           HSEKLA+AF LI S    H+IR++KN+R+C  CH   K+++ +   EI + D    HHF 
Sbjct: 851 HSEKLAIAFGLI-SVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFG 909

Query: 858 KNGQCSCGDYW 868
           K+G+CSCGDYW
Sbjct: 910 KDGECSCGDYW 920



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 216/457 (47%), Gaps = 45/457 (9%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKT 95
           R + A+ ++  +  +G    R +++ +L +C D +S+ LAR +HA +  +  + DV V T
Sbjct: 217 RPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVAT 276

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            L+++Y +CG +D++  VFE M  RN  +W+AMI A+++         +++ M Q+G  P
Sbjct: 277 ALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRP 336

Query: 156 DDFLFPKILQAC--GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           +   F   L+A    +  D      +H  +   G+     V  +++ +Y   G +  AR 
Sbjct: 337 NKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARA 396

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------ 261
            F+++  K+ V+WN+M++ Y   G   EA  LF  M R+ +    V++            
Sbjct: 397 AFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE 456

Query: 262 ---------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
                                N ++R + + G  +   E V   ++  +  D  +W   +
Sbjct: 457 ARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLE---EAVAAFDAT-VVKDSVSWNTKV 512

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGF 359
           +  +       A+  F  M   G  P+  T+ S +  C DL  L +G  I   L+  +  
Sbjct: 513 AALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEV 572

Query: 360 TDDVLVGNSLINMYSKC-EELEAAERVFDMIKD--KDVYSWNSMIAGYCQAGYCGKAYEL 416
             DV+V ++++NM +KC   ++  ER+F  + D  KD+ +WN+MIA Y Q G+  KA +L
Sbjct: 573 ERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKL 632

Query: 417 F-IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLF 452
           F I  Q S V P+  T+  ++SG    G  ++ +  F
Sbjct: 633 FRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCF 669



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 165/371 (44%), Gaps = 20/371 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVF 92
           NGR  EA+ +  ++  Q     + +Y+ +L  C D   +  AR +HA +  N +   +  
Sbjct: 419 NGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESS 475

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           +   ++ ++A+ G L++A   F+    ++  +W+  + A S  +     +  F+ M  +G
Sbjct: 476 IANGVVRMFARSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEG 535

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMH---SLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             PD F    ++  C + G  E G+ +    S  I++    V  V ++V+ +  KCG  +
Sbjct: 536 FRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVV--VASAVMNMVAKCGSSV 593

Query: 210 -WARRFFESM--DEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CREEIKLGVVTFNILI 265
               R F  M  D KD VAWN+MI+ Y Q G   +A +LF  M  R  ++    TF  ++
Sbjct: 594 DECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVL 653

Query: 266 RSYNQLGQCDVAME-MVKRMESLGITPD-VFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
              +  G  +  +       E LGI    V  + C++    + G   +A D  ++M    
Sbjct: 654 SGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPA 713

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
              + V  TS + AC+    L  G       +++ +  D +    L N+Y+     E + 
Sbjct: 714 ---DSVVWTSLLGACSSYGDLEGGERAARAFIEL-YRSDSVGYVVLSNIYAAAGRWEDSI 769

Query: 384 RVFDMIKDKDV 394
           RV + + ++ V
Sbjct: 770 RVREDMAERRV 780



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 16/252 (6%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +  L     L+ AIT   ++  +G +  + T ++++  C D  ++ L R +   L+ 
Sbjct: 509 NTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSA 568

Query: 86  VTEI--DVFVKTKLLSVYAKCG-CLDDAREVFEDMRE--RNLYTWSAMIGAYSRDQRWRE 140
             E+  DV V + ++++ AKCG  +D+   +F  M +  ++L  W+ MI AY++    R+
Sbjct: 569 AIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRK 628

Query: 141 VVELFFLMVQ-DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
            ++LF +M Q   + PD   F  +L  C + G  E G  +H   +   +  + +      
Sbjct: 629 ALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDG--IHCFFLAREVLGIEQQPVEHY 686

Query: 200 AVYV----KCGKLIWARRFFESMD-EKDGVAWNSMI---SGYFQIGENDEAHRLFDKMCR 251
           A  V    + G L  A  F   M    D V W S++   S Y  +   + A R F ++ R
Sbjct: 687 ACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYR 746

Query: 252 EEIKLGVVTFNI 263
            +    VV  NI
Sbjct: 747 SDSVGYVVLSNI 758


>gi|255560453|ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539509|gb|EEF41097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 662

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 198/662 (29%), Positives = 354/662 (53%), Gaps = 48/662 (7%)

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
           V + +++   K +S + + G +++AR +F+ +  RN  TW++MI  Y +     +  +LF
Sbjct: 42  VEDSNLYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMISGYVKRGEMTKARKLF 101

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M +  +   + +    + +C      E G+   +L  K+   C     N++++ Y K 
Sbjct: 102 DEMPERDVVSWNLIISGYV-SCRGKRFIEEGR---NLFDKMPERCCVSW-NTMISGYAKN 156

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G++  A   F +M EK+ V+WN+M+SG+ Q G+   A   F +M   +    V + + L+
Sbjct: 157 GRMDEALGLFNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERD----VTSLSALV 212

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPD--VFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
               Q  + D A  ++    + G + +  V  +  +I+G+ Q GR  +A +LF ++ F  
Sbjct: 213 SGLIQNSELDQAERILLDYGNNGGSKEYLVHAYNTLIAGYGQRGRVDEAQNLFDKIPFYN 272

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
               G T                            F  +V+  N++I  Y K  ++ +A 
Sbjct: 273 DQGKGRTGR--------------------------FERNVVSWNTMIMCYVKAGDVISAR 306

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
           ++FD + D+D +SWN+MI+GY       +A  LF KM      P+ ++WN++ISGY Q+G
Sbjct: 307 KLFDQMPDRDSFSWNTMISGYVHVLDMEEASNLFHKMPS----PDTLSWNLMISGYAQSG 362

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
           + + A D F+RM +     +N  SWNS+IAGY++ G    A+ +F +MQ      +  T+
Sbjct: 363 SLELAHDFFERMPQ-----KNLVSWNSVIAGYEKNGDYIGAINLFIQMQVEGEKSDRHTL 417

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS- 562
            S+L   + +V      +IH  V  +++   +P+ N+LI  Y++ G I  +RTIF  M  
Sbjct: 418 SSLLSVSSGIVDLQLGMQIHQLV-SKTVIPDVPLNNALITMYSRCGAIFEARTIFYEMKL 476

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            K++I+WN++I GY  HG+   AL+LF  M+SF ++P   TF+S++ A + AG+V+ G++
Sbjct: 477 QKEVISWNAMIGGYASHGYATEALELFKLMRSFKVQPTYITFISVLNACAHAGLVEEGRR 536

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
           +F S+   Y + P +EH+++++D+ GR G+LEEA++ I  M IEPD ++W ALL A R+H
Sbjct: 537 IFESMVSDYGVEPRVEHFASLVDIVGRQGQLEEALDLINSMTIEPDKAVWGALLGASRVH 596

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
            N+++A +A E L  LEP   +   L+  +Y   G+ ++A ++R +   N  +      W
Sbjct: 597 NNVEMARVAAEALMKLEPDSSVPYILLYNMYVDVGQWDNAAEIRSMMERNNIKKEAAISW 656

Query: 743 IE 744
           ++
Sbjct: 657 VD 658


>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  321 bits (823), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 187/509 (36%), Positives = 288/509 (56%), Gaps = 24/509 (4%)

Query: 372 MYSKCE---ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK-AYELFIKMQESDVPP 427
           MY+KC     ++ + +VF+ + + +V SW ++I  Y Q+G C K A ELF KM  + V  
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASV-- 58

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           N +  N LIS Y ++G  ++A   F  +      ++N  S+N+++ GY +  +   A  +
Sbjct: 59  NCVG-NSLISMYARSGRMEDARKAFDIL-----FEKNLVSYNAIVDGYAKNLKSEEAFLL 112

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           F ++  +    +  T  S+L   A + A  K ++IHG +L+   +S+  + N+LI  Y++
Sbjct: 113 FNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSR 172

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            GNI  +  +F+ M  +++I+W S+I G+  HGF   AL++F +M   G KPN  T++++
Sbjct: 173 CGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAV 232

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           + A S  GM+  G+K F S+ + + I+P +EHY+ M+DL GRSG L EAMEFI  MP+  
Sbjct: 233 LSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMA 292

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           D+ +W  LL ACR+HGN +L   A E + + EP D     L+  ++A  G+ +D +K+RK
Sbjct: 293 DALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRK 352

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--------TAR 779
             +E       G  WIEV+N V+ F  G  S   +  +Y  L  +   +        T  
Sbjct: 353 SMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTDF 412

Query: 780 SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVS 839
             H    IEEE+KE+    HSEK+A+AF LI +SQ+   IRI KN+R+C  CH   KY+S
Sbjct: 413 VLHD---IEEEQKEQFLFQHSEKIAVAFGLISTSQSK-PIRIFKNLRVCGDCHTAIKYIS 468

Query: 840 MMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           M    EI + DS   HH KNG CSC DYW
Sbjct: 469 MATGREIVVRDSNRFHHIKNGVCSCNDYW 497



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 142/265 (53%), Gaps = 11/265 (4%)

Query: 201 VYVKC---GKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND-EAHRLFDKMCREEIKL 256
           +Y KC   G +  +R+ FE M E + ++W ++I+ Y Q GE D EA  LF KM    +  
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASVN- 59

Query: 257 GVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 316
                N LI  Y + G+    ME  ++   +    ++ ++  ++ G+A+N ++ +A  LF
Sbjct: 60  --CVGNSLISMYARSGR----MEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLF 113

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
            E++  G+  +  T  S +S    + A+  G +IH   +K G+  +  + N+LI+MYS+C
Sbjct: 114 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 173

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
             +EAA +VF+ ++D++V SW SMI G+ + G+  +A E+F KM E+   PN IT+  ++
Sbjct: 174 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVL 233

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKV 461
           S     G   E    F  M K   +
Sbjct: 234 SACSHVGMISEGQKHFNSMYKEHGI 258



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 186/413 (45%), Gaps = 90/413 (21%)

Query: 100 VYAKC---GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRW-REVVELFFLMVQDGLFP 155
           +YAKC   G +DD+R+VFE M E N+ +W+A+I AY +     +E +E            
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIE------------ 48

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
              LF K++ A  NC                       V NS++++Y + G++  AR+ F
Sbjct: 49  ---LFCKMISASVNC-----------------------VGNSLISMYARSGRMEDARKAF 82

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------------- 261
           + + EK+ V++N+++ GY +  +++EA  LF+++    I +   TF              
Sbjct: 83  DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142

Query: 262 ---------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
                                N LI  Y++ G  + A ++   ME      +V +WT MI
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMED----RNVISWTSMI 198

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGF 359
           +GFA++G  ++AL++F +M   G  PN +T  + +SAC+ +  ++ G +  +S+  + G 
Sbjct: 199 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 258

Query: 360 TDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQA---GYCGKAYE 415
              +     ++++  +   L EA E +  M    D   W +++ G C+       G+   
Sbjct: 259 VPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL-GACRVHGNTELGRHAA 317

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
             I  QE D P   I   +L + +   G   + V + + M + + +K    SW
Sbjct: 318 EMILEQEPDDPAAYI---LLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSW 367



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 127/247 (51%), Gaps = 4/247 (1%)

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V   L+S+YA+ G ++DAR+ F+ + E+NL +++A++  Y+++ +  E   LF  +   G
Sbjct: 61  VGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTG 120

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           +    F F  +L    + G    G+ +H  ++K G    + + N+++++Y +CG +  A 
Sbjct: 121 IGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAF 180

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + F  M++++ ++W SMI+G+ + G    A  +F KM     K   +T+  ++ + + +G
Sbjct: 181 QVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVG 240

Query: 273 QCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
                 +    M +  GI P +  + CM+    ++G   +A++    M    +M + +  
Sbjct: 241 MISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP---LMADALVW 297

Query: 332 TSAISAC 338
            + + AC
Sbjct: 298 RTLLGAC 304


>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 235/802 (29%), Positives = 380/802 (47%), Gaps = 123/802 (15%)

Query: 7   TTFQQLHSLLTKKSNPRFRDTHLDFL---CGNGRLNEAITVLDSIATQGAKVRRNTYINL 63
           TTF+ L ++  KKS   +  T +  L      G + +   +   +   G   +R   I L
Sbjct: 3   TTFRTLLAIDPKKSFRAYAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKL 62

Query: 64  LQACIDSNSIHLARKLHAFLNLVTEID---VFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           L   ++       RK      +V E D   + V   ++S Y + G L  AR +F++M ER
Sbjct: 63  LILYLN------CRKFAEIDQIVKEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPER 116

Query: 121 NLYTWSAMIGA---YSR--DQRWR--------------------------EVVELFFLMV 149
           N  +WSA+I     Y R  +  W                           E ++LFF ++
Sbjct: 117 NEVSWSALISGLMKYGRVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLL 176

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           + G+ P+D  F  +++ACG  GDF  G  +  LV+K G      V NS++ + ++ G++ 
Sbjct: 177 ESGVRPNDVTFTSVVRACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEID 236

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            ARR F+ M+++D V+W +++  Y + G+  EA R+FD                      
Sbjct: 237 LARRVFDRMEKRDVVSWTAILDAYVETGDLREARRIFD---------------------- 274

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
                    EM +R E         +W+ MI+ ++Q+G   +AL LF +M   G  PN  
Sbjct: 275 ---------EMPERNE--------ISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNIS 317

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
                +SA   L+AL+ G+ IH    K+G                               
Sbjct: 318 CFACTLSALASLRALSAGINIHGHVTKIGI------------------------------ 347

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
            DKDV+  +S+I  YC+ G       +F  + E     NV+ WN ++ GY  NG  +E  
Sbjct: 348 -DKDVFIGSSLIDLYCKCGKPDDGRLVFDLILE----KNVVCWNSMVGGYSINGRLEETE 402

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           +LF+ + +     +N  SW ++IAGY +  Q    L VF  +  S   PN  T  SVL A
Sbjct: 403 ELFELIPE-----KNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLCA 457

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
           CA + + +K   +HG +++  ++  + V  +L D YAK G+I  S+ +F+ M  K+ I+W
Sbjct: 458 CASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDIGSSKQVFERMPEKNEISW 517

Query: 570 NSLICGYVLHGFWHAALDLFDQM-KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT 628
             +I G    GF   +L LF++M ++  + PN    LS++ A S  G+VD G   F S+ 
Sbjct: 518 TVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVLFACSHCGLVDKGLWYFNSME 577

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
           + Y I P  +HY+ ++DL  RSG+L EA EFI  +P +P+++ W ALL+ C+ + +  +A
Sbjct: 578 KVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPEANAWAALLSGCKKYKDEKIA 637

Query: 689 VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL 748
               ++L+ L   +     L+  IYA  G+  D   +RKL RE   + S G  W+EV+N 
Sbjct: 638 ERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKLMREKGLKKSGGCSWVEVRNQ 697

Query: 749 VYTFVTGGWSESYSDLLYSWLQ 770
           V++F +   S S S+ +Y  LQ
Sbjct: 698 VHSFYSEDGSHSQSNEIYGTLQ 719


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 220/810 (27%), Positives = 375/810 (46%), Gaps = 107/810 (13%)

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV-RNSVLAVYVKCGKL 208
           +  +  ++  + ++LQ C        G+ +HSL +K  +     +  N ++++Y  C   
Sbjct: 36  KQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSP 95

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------- 261
             A+  F+++++++  +W  +++ +   G++ E  R  ++M ++ ++   VTF       
Sbjct: 96  GDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSC 155

Query: 262 ----------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
                                       N L+  Y + G    A  +  +ME    T +V
Sbjct: 156 GDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMER---TRNV 212

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            +W+ M    A +G   +AL  F+ M  +G+      + + +SAC+    +  G  IHS 
Sbjct: 213 ISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSC 272

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD--KDVYSWNSMIAGYCQAGYCG 411
               GF  ++LV N+++ MY +C  +E A +VFD + +  +DV SWN M++ Y       
Sbjct: 273 IALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGK 332

Query: 412 KAYELFIKMQ--------------------------------ESDVPPNVITWNVLISGY 439
            A +L+ +MQ                                  ++  NVI  N L+S Y
Sbjct: 333 DAIQLYQRMQLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMY 392

Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM-------Q 492
            + G+  EA  +F +M +     R+  SW ++I+ Y +      A  +F++M        
Sbjct: 393 AKCGSHTEARAVFDKMEQ-----RSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGS 447

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
           S    P+ +  +++L ACA + A  + K +        L S   V  ++++ Y K G I 
Sbjct: 448 SQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIE 507

Query: 553 YSRTIFDGMSSK-DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             R IFDG+ S+ D+  WN++I  Y   G  H AL LF +M+  G++P+  +F+SI+LA 
Sbjct: 508 EGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLAC 567

Query: 612 SLAGMVDLGKKVFCSITECYQ-IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSS 670
           S  G+ D GK  F S+T  Y+ +   I+H+  + DL GR G+L+EA EF+E +P++PD+ 
Sbjct: 568 SHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAV 627

Query: 671 IWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLER 730
            W +LL ACR H ++  A     +L  LEP        +  IYA   K     KVRK   
Sbjct: 628 AWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMA 687

Query: 731 ENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---- 786
           E   +   G   IE+   ++ F TG       D  +   + + E +    S    C    
Sbjct: 688 EQGVKKERGVSTIEIGKYMHDFATG-------DDAHPRNREIREELAKLHSQMKECGYVP 740

Query: 787 --------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
                   ++E+EKE +   HSE+LA+A  LI S+     +R+ KN+R+C  CH   K +
Sbjct: 741 DTKMVLHFVDEQEKERLLFSHSERLAIALGLI-STPLGTPLRVTKNLRVCSDCHTATKLI 799

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S +   +I + D    H FK+G+CSC DYW
Sbjct: 800 SKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 829



 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 247/545 (45%), Gaps = 64/545 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           +G+  E +  L+ +   G +    T+I  L +C D  S+    ++H   ++   EID  V
Sbjct: 123 SGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKV 182

Query: 94  KTKLLSVYAKCGCLDDAREVFEDM-RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
              LL++Y KCG L  A+ VF  M R RN+ +WS M GA++      E +  F  M+  G
Sbjct: 183 SNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLG 242

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           +         IL AC +    + G+L+HS +   G      V N+V+ +Y +CG +  AR
Sbjct: 243 IKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEAR 302

Query: 213 RFFESMDE--KDGVAWNSMISGYFQIGENDEAHRLFDKM-----------------CREE 253
           + F++MDE  +D V+WN M+S Y       +A +L+ +M                   E+
Sbjct: 303 KVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLRADKVTYVSLLSACSSAED 362

Query: 254 IKLG---------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
           + LG               V+  N L+  Y + G    A  +  +ME   I     +WT 
Sbjct: 363 VGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSI----ISWTT 418

Query: 299 MISGFAQNGRTSQALDLFKEM-------SFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           +IS + +    ++A  LF++M       S   V P+ +   + ++AC D+ AL  G  + 
Sbjct: 419 IISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVS 478

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIAGYCQAGYC 410
             A   G + D  VG +++N+Y KC E+E   R+FD +  + DV  WN+MIA Y Q G  
Sbjct: 479 EQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQS 538

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
            +A +LF +M+   V P+  ++  ++      G ED+    F  M         T  + +
Sbjct: 539 HEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSM---------TTEYRN 589

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFY-------PNCVTILSVLPACAYLVASNKVKEIH 523
           +    Q  G   + LG   +++ +  +       P+ V   S+L AC       + KE+ 
Sbjct: 590 VTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVA 649

Query: 524 GCVLR 528
             +LR
Sbjct: 650 NKLLR 654



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 149/619 (24%), Positives = 279/619 (45%), Gaps = 87/619 (14%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDVFV 93
           R + A  VLD +  Q  +    TY  LLQ C  + ++   RK+H+     NL+   ++ +
Sbjct: 24  RSDIASAVLD-LEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPG-NLIL 81

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              ++S+YA C    DA+  F+ + +RNLY+W+ ++ A++   + +E +     M QDG+
Sbjct: 82  GNHIVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGV 141

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD   F   L +CG+      G  +H +V+   +    +V N++L +Y KCG L  A+R
Sbjct: 142 RPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKR 201

Query: 214 FFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL---GVVTF-------- 261
            F  M+  ++ ++W+ M   +   G   EA R F  M    IK     +VT         
Sbjct: 202 VFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPA 261

Query: 262 ------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                                   N ++  Y + G  + A ++   M+      DV +W 
Sbjct: 262 LVQDGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDE--ALRDVVSWN 319

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            M+S +  N R   A+ L++ M       + VT  S +SAC+  + + +G  +H   V  
Sbjct: 320 IMLSAYVHNDRGKDAIQLYQRMQL---RADKVTYVSLLSACSSAEDVGLGRVLHKQIVND 376

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
               +V+VGN+L++MY+KC     A  VFD ++ + + SW ++I+ Y +     +A  LF
Sbjct: 377 ELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLF 436

Query: 418 IKMQESD-------VPPNVITWNVLISG-----YIQNG------------NEDEA----- 448
            +M E +       V P+ + +  +++       ++ G            + D+A     
Sbjct: 437 QQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAV 496

Query: 449 VDLFQRMGKNDKVKR---------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
           V+L+ + G+ ++ +R         +   WN++IA Y Q GQ + AL +F +M+     P+
Sbjct: 497 VNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPD 556

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLR--RSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
             + +S+L AC++    ++ K     +    R++  ++     + D   + G +  +   
Sbjct: 557 SFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEF 616

Query: 558 FDGMSSK-DIITWNSLICG 575
            + +  K D + W SL+  
Sbjct: 617 LEKLPVKPDAVAWTSLLAA 635



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 125/265 (47%), Gaps = 10/265 (3%)

Query: 49  ATQGAKVRRNTYINLLQACIDSNSIHLARKLH---AFLNLVTEIDVFVKTKLLSVYAKCG 105
           ++Q  K     ++ +L AC D +++   + +    A   L +  D  V T ++++Y KCG
Sbjct: 447 SSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSS--DKAVGTAVVNLYGKCG 504

Query: 106 CLDDAREVFEDMRER-NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKIL 164
            +++ R +F+ +  R ++  W+AMI  Y++  +  E ++LF+ M  +G+ PD F F  IL
Sbjct: 505 EIEEGRRIFDGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSIL 564

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRN--SVLAVYVKCGKLIWARRFFESMDEK- 221
            AC + G  + GK   + +     +  R +++   V  +  + G+L  A  F E +  K 
Sbjct: 565 LACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKP 624

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMV 281
           D VAW S+++      +   A  + +K+ R E +     +  L   Y +L +     ++ 
Sbjct: 625 DAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCA-TGYVALSNIYAELQKWHAVAKVR 683

Query: 282 KRMESLGITPDVFTWTCMISGFAQN 306
           K M   G+  +    T  I  +  +
Sbjct: 684 KFMAEQGVKKERGVSTIEIGKYMHD 708


>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 624

 Score =  321 bits (822), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 201/593 (33%), Positives = 312/593 (52%), Gaps = 61/593 (10%)

Query: 291 PDVFTWTCMISGFAQNGRTSQ-ALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGM 348
           PDVF +  MI   A    +S  ++ +F  M  V G +PN  T      AC +   +  G 
Sbjct: 78  PDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGE 137

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           +I   A+K+G   ++ V N++I MY+    ++ A RVFD   D+D+YSW           
Sbjct: 138 QIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSW----------- 186

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                                   N++I GY+ +G    A ++F  M + D V     SW
Sbjct: 187 ------------------------NIMIGGYVGSGEIGRAKEMFDEMSERDVV-----SW 217

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
            ++IAGY Q+G    AL +F +M  +   PN  T+ S L ACA LVA ++ + IH  + +
Sbjct: 218 TTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDK 277

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFD---GMSSKDIITWNSLICGYVLHGFWHAA 585
             ++ +  ++ SL+D YAK G I ++  +F    G+  K +  WN++I GY +HG    A
Sbjct: 278 SEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLK-VWPWNAMIGGYAMHGKSKEA 336

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           +DLF+QMK   + PN+ TF++++ A S   +V+ G+  F S+   Y I P IEHY  M+D
Sbjct: 337 IDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVD 396

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           L GRSG L+EA E + +MP+ PD++IW ALL ACRIH +I+      + + +L+   +  
Sbjct: 397 LLGRSGLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGC 456

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
             L+  +Y+  G+ ++A  VR+    + R+ + G   IE+  + + F+ G  S   +  L
Sbjct: 457 HVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSIELNGVFHQFLVGDRSHPQTKQL 516

Query: 766 YSWLQNVPENVTARSSHSGLCIE----------EEEKEEISGIHSEKLALAFALIGSSQA 815
           Y +L    + +T +  ++G   E          EE+KE     HSEKLA+AF LI +   
Sbjct: 517 YLFL----DEMTTKLKNAGYVPEFGEVLLDIDDEEDKETALSKHSEKLAIAFGLINTPPG 572

Query: 816 PHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              IRIVKN+R+C  CHE  K++S ++  EI + D    HHFK+G CSC DYW
Sbjct: 573 T-AIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGFCSCKDYW 624



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 205/459 (44%), Gaps = 62/459 (13%)

Query: 64  LQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVY--AKCGCLDDAREVFEDMRER 120
           L++C   N I   ++ HA L     I       KLL V   +  G L  A ++F+ + + 
Sbjct: 22  LESCKSMNQI---KQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQLFDQIPKP 78

Query: 121 NLYTWSAMIGAYSR-DQRWREVVELFFLMVQ-DGLFPDDFLFPKILQACGNCGDFEAGKL 178
           +++ ++ MI A++         + +F  MV+  G  P+ + F  + +ACGN      G+ 
Sbjct: 79  DVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQ 138

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +    IK+G+     V N+++ +Y   G +  ARR F+   ++D  +WN MI GY   GE
Sbjct: 139 IRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGE 198

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
              A  +FD+M   +    VV++  +I  Y Q+G    A+++   M   G  P+ F    
Sbjct: 199 IGRAKEMFDEMSERD----VVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEF---- 250

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
                                          T+ SA++AC +L AL  G  IH    K  
Sbjct: 251 -------------------------------TLASALAACANLVALDQGRWIHVYIDKSE 279

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFD---MIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
              +  +  SL++MY+KC E++ A +VF     +K K V+ WN+MI GY   G   +A +
Sbjct: 280 IKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLK-VWPWNAMIGGYAMHGKSKEAID 338

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           LF +M+   V PN +T+  L++        +E    F+ M  +  ++     +  ++   
Sbjct: 339 LFEQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMV--- 395

Query: 476 QQLGQKNNALGVFRKMQSSCF----YPNCVTILSVLPAC 510
             LG+     G+ ++ + + F     P+     ++L AC
Sbjct: 396 DLLGRS----GLLKEAEETVFNMPMAPDATIWGALLGAC 430



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 174/385 (45%), Gaps = 47/385 (12%)

Query: 45  LDSIATQGAKVRRNTYINLLQACIDSNSIHLAR--KLHAFLNLVTEIDVFVKTKLLSVYA 102
           L  +   G    R T++ + +AC +   +      ++HA + +  E ++FV   ++ +YA
Sbjct: 105 LSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHA-IKIGLESNLFVTNAMIRMYA 163

Query: 103 KCGCLDDAR-------------------------------EVFEDMRERNLYTWSAMIGA 131
             G +D+AR                               E+F++M ER++ +W+ +I  
Sbjct: 164 NWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAG 223

Query: 132 YSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCV 191
           Y +   ++E ++LF  M+Q G  P++F     L AC N    + G+ +H  + K  +   
Sbjct: 224 YVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMN 283

Query: 192 RRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV-----AWNSMISGYFQIGENDEAHRLF 246
            R+  S+L +Y KCG++ +A + F    ++ G+      WN+MI GY   G++ EA  LF
Sbjct: 284 ERLLASLLDMYAKCGEIDFAAKVFH---DEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLF 340

Query: 247 DKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQ 305
           ++M  E++    VTF  L+ + +     +      K M  S GI P++  + CM+    +
Sbjct: 341 EQMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGR 400

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
           +G   +A +    M      P+     + + AC   K +  G  I  + +K   +D +  
Sbjct: 401 SGLLKEAEETVFNMPMA---PDATIWGALLGACRIHKDIERGQRIGKI-IKELDSDHIGC 456

Query: 366 GNSLINMYSKCEELEAAERVFDMIK 390
              L N+YS   + + A+ V   I+
Sbjct: 457 HVLLANLYSASGQWDEAKAVRQKIE 481



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 133/329 (40%), Gaps = 82/329 (24%)

Query: 430 ITWNVLISGYIQN--GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG-QKNNALG 486
           IT N L+   I +  G+   A  LF ++ K D        +N++I  +  +    +N++ 
Sbjct: 48  ITANKLLKVLIASSFGSLSYAHQLFDQIPKPD-----VFIYNTMIKAHAVIPTSSHNSMR 102

Query: 487 VFRKM-QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
           +F  M + S F PN  T + V  AC   +   + ++I    ++  LES+L V N++I  Y
Sbjct: 103 IFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMY 162

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSL-------------------------------IC 574
           A  G +  +R +FD    +D+ +WN +                               I 
Sbjct: 163 ANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIA 222

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA------------------------ 610
           GYV  G +  ALDLF +M   G  PN  T  S + A                        
Sbjct: 223 GYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKM 282

Query: 611 -----------HSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEF 659
                      ++  G +D   KVF    + Y +   +  ++AMI  Y   GK +EA++ 
Sbjct: 283 NERLLASLLDMYAKCGEIDFAAKVF---HDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDL 339

Query: 660 IEDMPIE---PDSSIWEALLTACRIHGNI 685
            E M +E   P+   + ALL AC  HG +
Sbjct: 340 FEQMKVEKVSPNKVTFVALLNACS-HGKL 367



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 8/259 (3%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK- 94
           G   EA+ +   +   G      T  + L AC +  ++   R +H +++  +EI +  + 
Sbjct: 228 GCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYID-KSEIKMNERL 286

Query: 95  -TKLLSVYAKCGCLDDAREVFEDMRERNL--YTWSAMIGAYSRDQRWREVVELFFLMVQD 151
              LL +YAKCG +D A +VF D     L  + W+AMIG Y+   + +E ++LF  M  +
Sbjct: 287 LASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVE 346

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            + P+   F  +L AC +    E G+    S+    G+         ++ +  + G L  
Sbjct: 347 KVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKE 406

Query: 211 ARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
           A     +M    D   W +++ G  +I ++ E  +   K+ +E     +    +L   Y+
Sbjct: 407 AEETVFNMPMAPDATIWGALL-GACRIHKDIERGQRIGKIIKELDSDHIGCHVLLANLYS 465

Query: 270 QLGQCDVAMEMVKRMESLG 288
             GQ D A  + +++E  G
Sbjct: 466 ASGQWDEAKAVRQKIEVSG 484


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 225/754 (29%), Positives = 366/754 (48%), Gaps = 87/754 (11%)

Query: 161 PKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK---LIWARRFFES 217
           P  L    +C  F+ G  +H+  I  G+       + +++ +   G    L  +R  F  
Sbjct: 10  PSSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQ 69

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI-KLGVVTFNILIRSYNQLGQCDV 276
           +D  +   WN+MI GY +     EA  L+  M  + I      TF  L+ S  +L   + 
Sbjct: 70  IDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEP 129

Query: 277 AMEMVKRMESLGITPDVF-------------------------------TWTCMISGFAQ 305
             E+   +   G   D+F                               ++  MI G+A+
Sbjct: 130 GHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAE 189

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK--MGFTDDV 363
             +   AL LF EM   G++P+  T  +  S C+ L    +G +IH+   K       ++
Sbjct: 190 VNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNI 249

Query: 364 LVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           L+ +++++MY+KC  +  AERVF  M   K   +W+SM                      
Sbjct: 250 LLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSM---------------------- 287

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
                        + GY + G  + A  LF  M + D +     SW ++I+GY Q GQ +
Sbjct: 288 -------------VCGYARCGEINVARKLFNHMHERDVI-----SWTAMISGYSQAGQCS 329

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS-L 541
            AL +F++M++    P+ VT+++VL ACA L A +  K ++   +   + +   ++ + +
Sbjct: 330 EALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAV 389

Query: 542 IDTYAKSGNIVYSRTIFD--GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
           +D YAK G+I  +  IF   G + K    +NS+I G   HG    A+ +F ++ S GLKP
Sbjct: 390 MDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKP 449

Query: 600 NRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEF 659
           +  TF+ ++ A   +G+++ GKK+F S+   Y I P +EHY  M+DL GR G LEEA + 
Sbjct: 450 DEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDL 509

Query: 660 IEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKP 719
           ++ MP E +S IW ALL+ACR HGN+ +  +A ++L ++E        L+  I A   + 
Sbjct: 510 VQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQW 569

Query: 720 EDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA- 778
           E+A +VRK+  ++  R   G  +IE+   ++ FV    S      +   L+++   + + 
Sbjct: 570 EEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSA 629

Query: 779 ----RSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHET 834
                ++     I+EEEKE +   HSEKLALAF L+  S    TIRIVKN+R+C  CH+ 
Sbjct: 630 GYVPNTAQVMFDIDEEEKESVVSYHSEKLALAFGLMYCSPTD-TIRIVKNLRICADCHKA 688

Query: 835 AKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            K VS ++  EI + D+   HHF+NG CSC D+W
Sbjct: 689 FKLVSEIYGREITVRDTMRFHHFRNGSCSCMDFW 722



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 161/674 (23%), Positives = 292/674 (43%), Gaps = 111/674 (16%)

Query: 91  VFVKTKLLSVYAKCGC---LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           +F  ++L+S ++  G    LD +R +F  +   NL+ W+ MI  YSR    RE + L+  
Sbjct: 41  IFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMS 100

Query: 148 MVQDGLFP-DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M+  G+ P ++F FP +L +C      E G  +HS +IK G      VRN+++ +Y   G
Sbjct: 101 MIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFG 160

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----- 261
            L  AR  F+    +D V++N+MI GY ++ + + A  LF +M    I     TF     
Sbjct: 161 NLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFS 220

Query: 262 ---------------------------NILIRS-----YNQLGQCDVAMEMVKRMES--- 286
                                      NIL++S     Y + G  ++A  +   M +   
Sbjct: 221 VCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKS 280

Query: 287 ----------------LGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSF 321
                           + +   +F         +WT MISG++Q G+ S+AL+LFKEM  
Sbjct: 281 AAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEA 340

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG-FTDDVLVGNSLINMYSKCEELE 380
           +G+ P+ VT+ + +SAC  L A  +G  ++   ++ G F  + ++  ++++MY+KC  ++
Sbjct: 341 LGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSID 400

Query: 381 AAERVFDMIKD--KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           +A  +F  +    K  + +NSMIAG  Q G    A  +F ++  + + P+ +T+  ++  
Sbjct: 401 SALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCA 460

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
              +G  +E   LF+ M     +K     +  ++    + G    A  + +KM    F  
Sbjct: 461 CGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMP---FEA 517

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGN----IVYS 554
           N V   ++L AC     + K+ EI G  L   +E+       L+       N        
Sbjct: 518 NSVIWRALLSACR-THGNVKIGEIAGQKLLE-MEAQHGARYVLLSNILADANQWEEARQV 575

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHA-------------ALDLFDQMKSFGLKPNR 601
           R + +    +    W+ +  G  +H F  +               D+  ++KS G  PN 
Sbjct: 576 RKVMEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNT 635

Query: 602 GTFL---------SIILAHSLAGMVDLGKKVFCSITECYQIIPMI-------EHYSAMID 645
              +         S++  HS    +  G  ++CS T+  +I+  +       + +  + +
Sbjct: 636 AQVMFDIDEEEKESVVSYHSEKLALAFG-LMYCSPTDTIRIVKNLRICADCHKAFKLVSE 694

Query: 646 LYGRSGKLEEAMEF 659
           +YGR   + + M F
Sbjct: 695 IYGREITVRDTMRF 708



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 11/214 (5%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKL-HAFL-NLVTEIDVFV 93
           G+ +EA+ +   +   G K    T + +L AC    +  L ++L H ++ N V   +  +
Sbjct: 326 GQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTIL 385

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRE--RNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
              ++ +YAKCG +D A E+F  + +  +  + +++MI   ++       + +F  ++  
Sbjct: 386 TAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELIST 445

Query: 152 GLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           GL PD+  F  +L ACG+ G  E G KL  S+    G+         ++ +  + G L  
Sbjct: 446 GLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEE 505

Query: 211 ARRFFESMD-EKDGVAWNSMIS-----GYFQIGE 238
           A    + M  E + V W +++S     G  +IGE
Sbjct: 506 AYDLVQKMPFEANSVIWRALLSACRTHGNVKIGE 539


>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 662

 Score =  320 bits (821), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 203/635 (31%), Positives = 325/635 (51%), Gaps = 58/635 (9%)

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
           +C V  E  K  + +     + TW  MIS     G+T +A++L+  M F GV+P+  T +
Sbjct: 47  KCSVITEARKLFDEMP-NRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFS 105

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGF-TDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           +   A +++     G + H LAV +GF   D  V   +++MY+K  +++ A  VFD + D
Sbjct: 106 AIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLD 165

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD- 450
           KDV  + ++I GY Q G  G+A E+F  M  S + PN  T   L S  +  GN  + V+ 
Sbjct: 166 KDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYT---LASVLVSCGNLGDLVNG 222

Query: 451 -----LFQRMGKNDKVKRNTA---------------------------SWNSLIAGYQQL 478
                L  + G    V   T+                           +W S I G  Q 
Sbjct: 223 KLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQN 282

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           G++  AL +FR+M      PN  T+ S+L AC+ L      ++IH   ++  ++ +  V 
Sbjct: 283 GREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVD 342

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
            +LI  Y K GN+  +R++FD ++  DI++ N++I  Y  +GF H AL+LF+++K  GL+
Sbjct: 343 AALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLE 402

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           PN  TF+SI+LA + AG+V+ G ++F  I   + I    +HY+ MIDL GR+ + EEA  
Sbjct: 403 PNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATM 462

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
            IE+    PD   W  LL AC+IHG +++A   ++++ D  P D     L+  IYA  GK
Sbjct: 463 LIEEGK-NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGK 521

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT- 777
            ++ ++++   R+   + +    W+++   V+TF+ G  S   +  +   L  + E V  
Sbjct: 522 WDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVIT 581

Query: 778 -ARSSHSGLCIEE-EEKEEISGI--HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHE 833
              +  +   +++ EE+++IS +  HSEKLA+AFAL  +      IRI KN+R+C     
Sbjct: 582 LGYNPDTKFVLQDLEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVC----- 636

Query: 834 TAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              Y        I   D+K  HHFK G CSC DYW
Sbjct: 637 -GDY--------IIARDAKRFHHFKGGICSCKDYW 662



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 218/448 (48%), Gaps = 34/448 (7%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           N Y +L+  C +  S+   + LH  +     +  F   KL+  Y KC  + +AR++F++M
Sbjct: 2   NCYTSLIAQCTNKKSLTTLKSLHTHILKSGSLFSFFGHKLIDGYIKCSVITEARKLFDEM 61

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             R++ TW++MI ++    + +E +EL+  M+ +G+ PD + F  I +A    G    G+
Sbjct: 62  PNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQ 121

Query: 178 LMHSLVIKLGMSCVRR-VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
             H L + LG       V   ++ +Y K GK+  AR  F+ + +KD V + ++I GY Q 
Sbjct: 122 KAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQH 181

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG------------------------ 272
           G + EA  +F+ M    IK    T   ++ S   LG                        
Sbjct: 182 GLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQ 241

Query: 273 --------QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
                   +C++  + +K   SL     V TWT  I G  QNGR   AL +F+EM    +
Sbjct: 242 TSLLTMYSKCNMVEDSIKVFNSLAYASHV-TWTSFIVGLVQNGREEVALSMFREMMRCSI 300

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            PN  T++S + AC+ L  L  G +IH++ VK+G   +  V  +LI++Y KC  +E A  
Sbjct: 301 SPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARS 360

Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN 444
           VFD + + D+ S N+MI  Y Q G+  +A ELF ++++  + PNV+T+  ++      G 
Sbjct: 361 VFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGL 420

Query: 445 EDEAVDLFQRMGKNDKVKRNTASWNSLI 472
            +E   +F  +  N  ++     +  +I
Sbjct: 421 VEEGCQIFSLIRNNHSIELTRDHYTCMI 448



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 216/474 (45%), Gaps = 49/474 (10%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEI-DVFV 93
           G+  EAI +  ++  +G      T+  + +A  +       +K H   + L  E+ D FV
Sbjct: 80  GKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV 139

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T ++ +YAK G + DAR VF+ + ++++  ++A+I  Y++     E +E+F  MV   +
Sbjct: 140 ATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRI 199

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+++    +L +CGN GD   GKL+H LV+K G+  V   + S+L +Y KC  +  + +
Sbjct: 200 KPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIK 259

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR---------------------- 251
            F S+     V W S I G  Q G  + A  +F +M R                      
Sbjct: 260 VFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAM 319

Query: 252 ----EEIKLGVVTFNI---------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
               E+I    V   +         LI  Y + G  + A  +   +  L    D+ +   
Sbjct: 320 LEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTEL----DIVSINT 375

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK-- 356
           MI  +AQNG   +AL+LF+ +  +G+ PN VT  S + AC +   +  G +I SL     
Sbjct: 376 MIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNH 435

Query: 357 -MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
            +  T D      +I++  + +  E A  + +  K+ DV  W +++   C+     +  E
Sbjct: 436 SIELTRDHY--TCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNA-CKIHGEVEMAE 492

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
            F+K      P +  T  +L + Y   G  D  +++ +  G++ ++K+  A SW
Sbjct: 493 KFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEM-KSAGRDLRLKKTPAMSW 545



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 3/251 (1%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  NGR   A+++   +          T  ++L AC     +    ++HA  + L  + +
Sbjct: 279 LVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGN 338

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
            FV   L+ +Y KCG ++ AR VF+ + E ++ + + MI AY+++    E +ELF  + +
Sbjct: 339 KFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKK 398

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI-KLGMSCVRRVRNSVLAVYVKCGKLI 209
            GL P+   F  IL AC N G  E G  + SL+     +   R     ++ +  +  +  
Sbjct: 399 LGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFE 458

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A    E     D + W ++++     GE + A +   KM  +  + G  T  +L   Y 
Sbjct: 459 EATMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDG-GTHILLTNIYA 517

Query: 270 QLGQCDVAMEM 280
             G+ D  +EM
Sbjct: 518 SAGKWDNVIEM 528



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 8/187 (4%)

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           NC T  S++  C    +   +K +H  +L+  SL S     + LID Y K   I  +R +
Sbjct: 2   NCYT--SLIAQCTNKKSLTTLKSLHTHILKSGSLFSFFG--HKLIDGYIKCSVITEARKL 57

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           FD M ++ I+TWNS+I  +V  G    A++L+  M   G+ P+  TF +I  A S  G+ 
Sbjct: 58  FDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVS 117

Query: 618 DLGKKVF-CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
             G+K    ++   +++       + ++D+Y + GK+++A  F+ D  ++ D  ++ AL+
Sbjct: 118 REGQKAHGLAVVLGFEVSDGFV-ATGIVDMYAKFGKMKDA-RFVFDRVLDKDVVLFTALI 175

Query: 677 TACRIHG 683
                HG
Sbjct: 176 VGYNQHG 182


>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 2000

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 210/709 (29%), Positives = 351/709 (49%), Gaps = 83/709 (11%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           ++ A +   ++  ARKL   +    EI     T L+S + K G + ++   FE    +N+
Sbjct: 93  MISANVQRGNLDEARKLFDEMPQTNEISW---TALISGFMKYGRVRESMWYFERNPFQNV 149

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            +W+A I  Y ++    E ++LF  +++  + P+   F  +++AC N GDF  G  +  L
Sbjct: 150 VSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGDFGLGMSVLGL 209

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           ++K G      V NS++ + ++ G++  AR  F+ M+EKD V+W +++  Y ++ E  EA
Sbjct: 210 IVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDLYVEMDELGEA 269

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
            R+FD                               EM +R E         +W+ MI+ 
Sbjct: 270 RRIFD-------------------------------EMPQRNE--------VSWSAMIAR 290

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           + Q+G   ++L LF  M   G  PN    +S +SA   ++AL  GM IH    K+GF  D
Sbjct: 291 YCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKD 350

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V V +SLI+M                               YC+ G       LF  + E
Sbjct: 351 VFVSSSLIDM-------------------------------YCKCGETKDGRFLFDTILE 379

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
                N+++WN ++ GY  NG+ +EA  LF  M       RN  SW+++IAG+    Q +
Sbjct: 380 K----NMVSWNAMVGGYSLNGHMEEAKYLFNIMPV-----RNNVSWSAIIAGHLDCEQFD 430

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
               VF +M      PN  T  S+L ACA   + +K K +HG +++  ++    V  +L 
Sbjct: 431 EMFEVFNEMILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALT 490

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM-KSFGLKPNR 601
           D YAKSG+I  S+ +F+ M  K+ ++W ++I G    G    +L LF++M K+  + PN 
Sbjct: 491 DMYAKSGDIESSKKVFNRMPKKNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNE 550

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
             FL+++ A S +G+VD G   F S+   Y + P   H++ ++D+  R+G+L EA EFI 
Sbjct: 551 VMFLAVLFACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIY 610

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPED 721
            MP +P+++ W ALL+ C+ + N +LA     +L+++   +     L+  IYA  G+  D
Sbjct: 611 SMPFQPETNAWAALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRD 670

Query: 722 ALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ 770
            LKVRKL +    + S G  W+E+++ V++F +   + S S  +Y  L+
Sbjct: 671 VLKVRKLMKAKGLKKSGGCSWVEIRDRVHSFYSEDGAHSQSAEIYEILE 719



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 155/580 (26%), Positives = 264/580 (45%), Gaps = 92/580 (15%)

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           +L+   N G    G  +H+ + K G+S  + +   +L +Y+   K   A +  +  D  D
Sbjct: 27  LLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQISKDFDGFD 86

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVK 282
            V  N MIS   Q G  DEA +LFD+M     +   +++  LI  + + G+   +M   +
Sbjct: 87  LVVHNCMISANVQRGNLDEARKLFDEMP----QTNEISWTALISGFMKYGRVRESMWYFE 142

Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
           R        +V +WT  ISG+ QNG + +A+ LF ++    V PN VT TS + AC +L 
Sbjct: 143 R----NPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLG 198

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
              +GM +  L VK G+  D+ V NSLI +  +  E+  A  VFD +++KDV SW +++ 
Sbjct: 199 DFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILD 258

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
            Y +    G+A  +F +M +     N ++W+ +I+ Y Q+G  +E++ LF RM +     
Sbjct: 259 LYVEMDELGEARRIFDEMPQR----NEVSWSAMIARYCQSGYPEESLRLFCRMIQEG--- 311

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
                                            F PN     S+L A A + A      I
Sbjct: 312 ---------------------------------FKPNISCFSSILSALASVEALQAGMNI 338

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF- 581
           HG V +   E  + V +SLID Y K G     R +FD +  K++++WN+++ GY L+G  
Sbjct: 339 HGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILEKNMVSWNAMVGGYSLNGHM 398

Query: 582 -----------------WHAAL-------------DLFDQMKSFGLKPNRGTFLSIILAH 611
                            W A +             ++F++M   G  PN+ TF S++ A 
Sbjct: 399 EEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTFSSLLCAC 458

Query: 612 SLAGMVDLGKKVFCSIT----ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           +    +D GK +   I     +C   +      +A+ D+Y +SG +E + +    MP + 
Sbjct: 459 ASTASLDKGKNLHGKIVKLGIQCDTYVG-----TALTDMYAKSGDIESSKKVFNRMPKKN 513

Query: 668 DSSIWEALLTACRIHGNIDLAVL---AIERLFDLEPGDVL 704
           + S W A++      G  + ++     +E+   + P +V+
Sbjct: 514 EVS-WTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVM 552



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 206/425 (48%), Gaps = 44/425 (10%)

Query: 33  CGN-GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV 91
           C N G     ++VL  I   G +       +L+  C+    IHLAR++    + + E DV
Sbjct: 194 CANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREV---FDRMEEKDV 250

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
              T +L +Y +   L +AR +F++M +RN  +WSAMI  Y +     E + LF  M+Q+
Sbjct: 251 VSWTAILDLYVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQE 310

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G  P+   F  IL A  +    +AG  +H  V K+G      V +S++ +Y KCG+    
Sbjct: 311 GFKPNISCFSSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDG 370

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R  F+++ EK+ V+WN+M+ GY   G  +EA  LF+ M         V  N+        
Sbjct: 371 RFLFDTILEKNMVSWNAMVGGYSLNGHMEEAKYLFNIM--------PVRNNV-------- 414

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
                                  +W+ +I+G     +  +  ++F EM  +G +PN  T 
Sbjct: 415 -----------------------SWSAIIAGHLDCEQFDEMFEVFNEMILLGEIPNKSTF 451

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           +S + AC    +L  G  +H   VK+G   D  VG +L +MY+K  ++E++++VF+ +  
Sbjct: 452 SSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDIESSKKVFNRMPK 511

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQE-SDVPPNVITWNVLISGYIQNGNEDEAVD 450
           K+  SW +MI G  ++G   ++  LF +M++ S + PN + +  ++     +G  D+ + 
Sbjct: 512 KNEVSWTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVLFACSHSGLVDKGLW 571

Query: 451 LFQRM 455
            F  M
Sbjct: 572 YFNSM 576


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 196/587 (33%), Positives = 306/587 (52%), Gaps = 47/587 (8%)

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           G  PN  T +S +SA      +  G ++HSL  K GF  ++ VG +L++MY+KC ++ +A
Sbjct: 5   GPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSA 64

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK-MQESDVPPNVITWNVLIS---- 437
            RVFD + ++++ SWNSMI G+       +A  +F   ++E  V PN ++ + ++S    
Sbjct: 65  VRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACAN 124

Query: 438 -GYIQNGNE------------------------------DEAVDLFQRMGKNDKVKRNTA 466
            G +  G +                              DE V LFQ +G  D V     
Sbjct: 125 MGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVV----- 179

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           +WN L+ G+ Q  +   A   F  M+     P+  +  +VL + A L A ++   IH  +
Sbjct: 180 TWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQI 239

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           ++     ++ ++ SLI  YAK G++V +  +F+G+   ++I+W ++I  Y LHG  +  +
Sbjct: 240 IKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVI 299

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
           +LF+ M S G++P+  TF+ ++ A S  G V+ G   F S+ + + + P  EHY+ M+DL
Sbjct: 300 ELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDL 359

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GR+G L+EA  FIE MP++P  S+W ALL ACR +GN+ +   A ERLF++EP +    
Sbjct: 360 LGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNY 419

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY 766
            L+  +    G+ E+A +VR+L   N  R   G  WI+VKN+ + F     S S SD +Y
Sbjct: 420 VLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIY 479

Query: 767 SW-----LQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRI 821
                       +   A +      +EE E+E+    HSEKLALAF L+ +      IRI
Sbjct: 480 KMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLL-TLPIDSPIRI 538

Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            KN+R C HCH   K  S +   EI + D    H F +G CSCGDYW
Sbjct: 539 KKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 210/455 (46%), Gaps = 42/455 (9%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDA 110
           G    + T+ ++L A   +  +   ++LH+ ++    + ++FV T L+ +YAKC  +  A
Sbjct: 5   GPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSA 64

Query: 111 REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF-LMVQDGLFPDDFLFPKILQACGN 169
             VF+ M ERNL +W++MI  +  +  +   V +F  ++ +  + P++     +L AC N
Sbjct: 65  VRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACAN 124

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
            G    G+ +H +V+K G+  +  V NS++ +Y KC       + F+ + ++D V WN +
Sbjct: 125 MGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVL 184

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD---------VAMEM 280
           + G+ Q  + +EA   F  M RE I     +F+ ++ S   L             + +  
Sbjct: 185 VMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGY 244

Query: 281 VKRMESLG--IT--------------------PDVFTWTCMISGFAQNGRTSQALDLFKE 318
           VK M  LG  IT                     +V +WT MIS +  +G  +Q ++LF+ 
Sbjct: 245 VKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEH 304

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS----LINMYS 374
           M   G+ P+ VT    +SAC+    +  G+   +   K+    D+  G      ++++  
Sbjct: 305 MLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKI---HDMNPGPEHYACMVDLLG 361

Query: 375 KCEELEAAERVFDMIKDKDVYS-WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
           +   L+ A+R  + +  K   S W +++    + G      E   ++ E + P N   + 
Sbjct: 362 RAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEME-PYNPGNYV 420

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           +L +   ++G  +EA ++ + MG N   K    SW
Sbjct: 421 LLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSW 455



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/356 (22%), Positives = 165/356 (46%), Gaps = 11/356 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYIN-LLQACIDSNSIHLARKLHAFLNLVTEIDV-F 92
           N   + A+ V   +  +   +     ++ +L AC +   ++  R++H  +     + + +
Sbjct: 89  NNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTY 148

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V   L+ +Y KC   D+  ++F+ + +R++ TW+ ++  + ++ ++ E    F++M ++G
Sbjct: 149 VMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREG 208

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + PD+  F  +L +  +      G  +H  +IKLG      +  S++ +Y KCG L+ A 
Sbjct: 209 ILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAY 268

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + FE +++ + ++W +MIS Y   G  ++   LF+ M  E I+   VTF  ++ + +  G
Sbjct: 269 QVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTG 328

Query: 273 QCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           + +  +     M+ +  + P    + CM+    + G   +A    + M    + P     
Sbjct: 329 RVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMP---MKPTPSVW 385

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS--LINMYSKCEELEAAERV 385
            + + AC     L MG E      +M   +    GN   L NM ++   LE A  V
Sbjct: 386 GALLGACRKYGNLKMGREAAERLFEM---EPYNPGNYVLLANMCTRSGRLEEANEV 438


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 247/907 (27%), Positives = 408/907 (44%), Gaps = 111/907 (12%)

Query: 58  NTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
            T   LL+ CI    +   R+LH   +      +  +   L+ +Y+KC  LDDA   F  
Sbjct: 25  ETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLDDANAAFSA 84

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA- 175
           +R R + TW+ +I A S      ++     L  +    P+      +L A  + GD  + 
Sbjct: 85  LRSRGIATWNTLIAAQSSPAAVFDLYTRMKLEERAENRPNRLTIIAVLGAIAS-GDPSSS 143

Query: 176 ------GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
                  +++H  +    +     V  ++L  Y KCG +  A   F  +   D + WN+ 
Sbjct: 144 SSSRAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRIQVPDLICWNAA 203

Query: 230 ISGYFQIGEN-DEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
           I       E  D A  L  +M  E +     +F  ++ S        +A  +  R+E LG
Sbjct: 204 IMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELG 263

Query: 289 ITPDVF-------------------------------TWTCMISGFAQNGRTSQALDLFK 317
              DV                                +W  MI+ FAQ G  S A  ++ 
Sbjct: 264 FLGDVVVATALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYW 323

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMG--MEIHSLAVKMGFTDDVLVGNSLINMYSK 375
            M   G  PN +T  +A+ A     +  +G    +H      G   DV+VG +L+ MY  
Sbjct: 324 RMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGS 383

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--- 432
              ++ A   FD I  K++ SWN+M+  Y   G   +A ELF  M+   + PN +++   
Sbjct: 384 TGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAV 443

Query: 433 ------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                         N ++  + ++G+ +EA+  F     +  V 
Sbjct: 444 LGCCEDVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAF-----DATVV 498

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL----VASNK 518
           +++ SWN+ +A        + A+  F  MQ   F P+  T++SV+  CA L    +  + 
Sbjct: 499 KDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSI 558

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS-RTIFDGMSS--KDIITWNSLICG 575
            +++   +    +E  + V +++++  AK G+ V     +F  M    KD++ WN++I  
Sbjct: 559 QQQLSAAI---EVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAA 615

Query: 576 YVLHGFWHAALDLFDQMKS-FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
           Y  HG    AL LF  M+    ++P+  TF+S++   S AG+V+ G   F    E   I 
Sbjct: 616 YAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIE 675

Query: 635 PM-IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
              +EHY+ ++D+ GR G L EA +FI  MP+  DS +W +LL AC  +G+++    A  
Sbjct: 676 QQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAAR 735

Query: 694 RLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK-LERENTRRNSFGQCWIEVKNLVYTF 752
              +L   D +   ++  IYA  G+ ED+++VR+ +     ++ + G+  I VKN V+ F
Sbjct: 736 AFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEF 795

Query: 753 VTGGWSESYSDLLYSWLQN----------VPENVTARSSHSGLCIEEEEKEEISGIHSEK 802
                S   SD +Y+ L+           VP+  T    H    +EEE+KE++   HSEK
Sbjct: 796 FARDRSHPQSDEIYAELERLKGLIREAGYVPD--TRLVLHD---VEEEQKEQLLWYHSEK 850

Query: 803 LALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF-KNGQ 861
           LA+AF LI S    H+IR++KN+R+C  CH   K+++ +   EI + D    HHF K+G+
Sbjct: 851 LAIAFGLI-SVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGE 909

Query: 862 CSCGDYW 868
           CSCGDYW
Sbjct: 910 CSCGDYW 916



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 214/457 (46%), Gaps = 45/457 (9%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKT 95
           R + A+ ++  +  +G    R +++ +L +C D +S+ LAR +HA +  +  + DV V T
Sbjct: 213 RPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVVVAT 272

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            L+++Y +CG +D++  VFE M  RN  +W+AMI A+++         +++ M Q+G  P
Sbjct: 273 ALVTMYGRCGSVDESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQEGFRP 332

Query: 156 DDFLFPKILQAC--GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           +   F   L+A    +  D      +H  +   G+     V  +++ +Y   G +  AR 
Sbjct: 333 NKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGSTGAIDRARA 392

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------ 261
            F+++  K+ V+WN+M++ Y   G   EA  LF  M R+ +    V++            
Sbjct: 393 AFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCEDVSE 452

Query: 262 ---------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
                                N ++R + + G  + AM          +  D  +W   +
Sbjct: 453 ARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDAT----VVKDSVSWNTKV 508

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGF 359
           +  +       A+  F  M   G  P+  T+ S +  C DL  L +G  I   L+  +  
Sbjct: 509 AALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEV 568

Query: 360 TDDVLVGNSLINMYSKC-EELEAAERVFDMIKD--KDVYSWNSMIAGYCQAGYCGKAYEL 416
             DV+V ++++NM +KC   ++  ER+F  + D  KD+ +WN+MIA Y Q G+  KA +L
Sbjct: 569 ERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKL 628

Query: 417 F-IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLF 452
           F I  Q S V P+  T+  ++SG    G  ++ +  F
Sbjct: 629 FRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCF 665



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 165/371 (44%), Gaps = 20/371 (5%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVF 92
           NGR  EA+ +  ++  Q     + +Y+ +L  C D   +  AR +HA +  N +   +  
Sbjct: 415 NGRAREAMELFAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESS 471

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           +   ++ ++A+ G L++A   F+    ++  +W+  + A S  +     +  F+ M  +G
Sbjct: 472 IANGVVRMFARSGSLEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEG 531

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMH---SLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
             PD F    ++  C + G  E G+ +    S  I++    V  V ++V+ +  KCG  +
Sbjct: 532 FRPDKFTLVSVVDVCADLGTLELGRSIQQQLSAAIEVERDVV--VESAVMNMVAKCGSSV 589

Query: 210 -WARRFFESM--DEKDGVAWNSMISGYFQIGENDEAHRLFDKM-CREEIKLGVVTFNILI 265
               R F  M  D KD VAWN+MI+ Y Q G   +A +LF  M  R  ++    TF  ++
Sbjct: 590 DECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVL 649

Query: 266 RSYNQLGQCDVAME-MVKRMESLGITPD-VFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
              +  G  +  +       E LGI    V  + C++    + G   +A D  ++M    
Sbjct: 650 SGCSHAGLVEDGIHCFFLAREVLGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPA 709

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
              + V  TS + AC+    L  G       +++ +  D +    L N+Y+     E + 
Sbjct: 710 ---DSVVWTSLLGACSSYGDLEGGERAARAFIEL-YRSDSVGYVVLSNIYAAAGRWEDSI 765

Query: 384 RVFDMIKDKDV 394
           RV + + ++ V
Sbjct: 766 RVREDMAERRV 776



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 117/252 (46%), Gaps = 16/252 (6%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +  L     L+ AIT   ++  +G +  + T ++++  C D  ++ L R +   L+ 
Sbjct: 505 NTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSIQQQLSA 564

Query: 86  VTEI--DVFVKTKLLSVYAKCG-CLDDAREVFEDMRE--RNLYTWSAMIGAYSRDQRWRE 140
             E+  DV V++ ++++ AKCG  +D+   +F  M +  ++L  W+ MI AY++    R+
Sbjct: 565 AIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQHGHGRK 624

Query: 141 VVELFFLMVQ-DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
            ++LF +M Q   + PD   F  +L  C + G  E G  +H   +   +  + +      
Sbjct: 625 ALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDG--IHCFFLAREVLGIEQQPVEHY 682

Query: 200 AVYV----KCGKLIWARRFFESMD-EKDGVAWNSMI---SGYFQIGENDEAHRLFDKMCR 251
           A  V    + G L  A  F   M    D V W S++   S Y  +   + A R F ++ R
Sbjct: 683 ACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFIELYR 742

Query: 252 EEIKLGVVTFNI 263
            +    VV  NI
Sbjct: 743 SDSVGYVVLSNI 754


>gi|297739440|emb|CBI29622.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 205/617 (33%), Positives = 335/617 (54%), Gaps = 26/617 (4%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           ++R Y+ L      + M ++M+  G+ PD F +  +I      G    A  L        
Sbjct: 1   MLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTGGIGFHAHVLKLGHGSDA 60

Query: 324 VMPNGVTITSAISACTDLKALAMGM-EIHSLAVKMGFTD-----DVLVGNSLINMYSKCE 377
            + N V I        D  A+  G  +  S        D     +V+   +++  Y+K +
Sbjct: 61  FVRNAV-IDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVK 119

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           +LEAA R FD + ++ V SWN+M++GY Q G   +A  LF +M  +    N +TWN +IS
Sbjct: 120 DLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMLGA--YRNSVTWNAMIS 177

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM-QSSCF 496
            Y++ G+ D A  LF  M       RN  +WNS+IAGY Q GQ   A+ +F++M  +   
Sbjct: 178 AYMRVGDLDSARKLFNTM-----PGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKL 232

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            P+ VT++SV+ AC +L A      +   +    ++ S+   N++I  Y++ G++  ++ 
Sbjct: 233 TPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKR 292

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           +F  M+++D++++N+LI G+  HG    A++L   MK  G++P+R TF+ ++ A S AG+
Sbjct: 293 VFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGL 352

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           ++ G+KVF SI +     P I+HY+ M+DL GR G+LE+A   +E MP+EP + ++ +LL
Sbjct: 353 LEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLL 407

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
            A RIH  ++L  LA  +LF+LEP +     L+  IYA  G+ +D  ++R+  ++   + 
Sbjct: 408 NASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKK 467

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEE 791
           + G  W+E    ++ F+    S   SD +Y  L  + + +      A  S     +EEEE
Sbjct: 468 TTGWSWVEYGGKLHKFIVADRSHERSDDIYQLLIELRKKMREAGYIADKSCVLRDVEEEE 527

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           KEEI G HSEKLA+ +AL+  S+A   IR+VKN+R+C  CH   K +S +    I + D+
Sbjct: 528 KEEIVGTHSEKLAICYALL-VSEAGAVIRVVKNLRVCWDCHTAIKMISKLEGRVIIVRDN 586

Query: 852 KCLHHFKNGQCSCGDYW 868
              H F +G CSC DYW
Sbjct: 587 NRFHCFNDGLCSCKDYW 603



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 199/405 (49%), Gaps = 83/405 (20%)

Query: 128 MIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
           M+  YS  Q   +VV ++  M   G+ PD F++P ++++ G       G   H+ V+KLG
Sbjct: 1   MLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGT-----GGIGFHAHVLKLG 55

Query: 188 MSCVRRVRNSVLAVYVKC-----------------GKLIW-------------------- 210
                 VRN+V+ +Y +                  G+  W                    
Sbjct: 56  HGSDAFVRNAVIDMYARKVADWNAMVSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGY 115

Query: 211 --------ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGV---- 258
                   ARR+F+ M E+  V+WN+M+SGY Q G  +EA RLFD+M      LG     
Sbjct: 116 AKVKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEM------LGAYRNS 169

Query: 259 VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
           VT+N +I +Y ++G  D A ++   M       +V TW  MI+G+AQNG+++ A++LFKE
Sbjct: 170 VTWNAMISAYMRVGDLDSARKLFNTMPG----RNVVTWNSMIAGYAQNGQSAMAIELFKE 225

Query: 319 M-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
           M +   + P+ VT+ S ISAC  L AL +G  +     +      +   N++I MYS+C 
Sbjct: 226 MITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCG 285

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-NVLI 436
            +E A+RVF  +  +DV S+N++I+G+   G+  +A  L   M+E  + P+ +T+  VL 
Sbjct: 286 SMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLT 345

Query: 437 ----SGYIQNGN------EDEA-------VDLFQRMGKNDKVKRN 464
               +G ++ G       +D A       VDL  R+G+ +  KR 
Sbjct: 346 ACSHAGLLEEGRKVFESIKDPAIDHYACMVDLLGRVGELEDAKRT 390



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 149/343 (43%), Gaps = 83/343 (24%)

Query: 82  FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
             +++ E +V   T +++ YAK   L+ AR  F+ M ER++ +W+AM+  Y+        
Sbjct: 96  LFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLSGYA-------- 147

Query: 142 VELFFLMVQDGLFPDDF-LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
                   Q+GL  +   LF ++L A  N   +                      N++++
Sbjct: 148 --------QNGLAEEALRLFDEMLGAYRNSVTW----------------------NAMIS 177

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM----------- 249
            Y++ G L  AR+ F +M  ++ V WNSMI+GY Q G++  A  LF +M           
Sbjct: 178 AYMRVGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEV 237

Query: 250 -------------------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
                                       +IKL +   N +I  Y++ G    +ME  KR+
Sbjct: 238 TMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCG----SMEDAKRV 293

Query: 285 ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
                T DV ++  +ISGFA +G   +A++L   M   G+ P+ VT    ++AC+    L
Sbjct: 294 FQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLL 353

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
             G ++   ++K    D       ++++  +  ELE A+R  +
Sbjct: 354 EEGRKVFE-SIKDPAIDHYAC---MVDLLGRVGELEDAKRTME 392



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 63/120 (52%), Gaps = 1/120 (0%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFLNL-VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T ++++ AC    ++ L   +  FL     ++ +     ++ +Y++CG ++DA+ VF++M
Sbjct: 238 TMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEM 297

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
             R++ +++ +I  ++      E + L   M + G+ PD   F  +L AC + G  E G+
Sbjct: 298 ATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGR 357


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 685

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 189/613 (30%), Positives = 311/613 (50%), Gaps = 36/613 (5%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P++F +  +I+GF  N    + LDLF  +   G+  +G T    + ACT      +G+++
Sbjct: 74  PNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDL 133

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           HSL VK GF  DV    SL+++YS    L  A +VF+ I ++ V +W ++ +GY  AG  
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKH 193

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA---------------------- 448
            +A +LF KM E  V P+      ++S  +  G+ D                        
Sbjct: 194 REAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTL 253

Query: 449 VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           V+L+ + GK +K +        ++  +W+++I GY         +  F +M      P+ 
Sbjct: 254 VNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQ 313

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
            +I+  L +CA L A +  +     + R    ++L + N+LID YAK G +     +F  
Sbjct: 314 FSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKE 373

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           M  KDI+  N+ I G   +G    +  +F Q +  G+ P+  TFL ++     AG++  G
Sbjct: 374 MKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG 433

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
            + F +I+  Y +   +EHY  M+DL+GR+G L++A   I DMP+ P++ +W ALL+ CR
Sbjct: 434 LRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCR 493

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           +  +  LA   ++ L  LEP +      +  IY++ G+ ++A +VR +      +   G 
Sbjct: 494 LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGY 553

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEI 795
            WIE++  V+ F+    S   SD +Y+ L+++   +        +      +E+EEKE +
Sbjct: 554 SWIELEGTVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERV 613

Query: 796 SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
            G HSEKLA+AF LI S+     IR+VKN+R+C  CHE  K +S +   EI + D+   H
Sbjct: 614 LGHHSEKLAVAFGLI-STDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFH 672

Query: 856 HFKNGQCSCGDYW 868
            F NG CSC DYW
Sbjct: 673 CFTNGSCSCNDYW 685



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 215/447 (48%), Gaps = 30/447 (6%)

Query: 9   FQQLHSLLTKKSNPRFRDTHLDFLCGNGRLN-----EAITVLDSIATQGAKVRRNTYINL 63
           F+Q H      S+ +F +  L     NG +N     E + +  SI   G  +   T+  +
Sbjct: 58  FRQTHYSFLLFSHTQFPNIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLV 117

Query: 64  LQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
           L+AC  +++  L   LH+ +       DV   T LLS+Y+  G L+DA +VFE++ ER++
Sbjct: 118 LKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSV 177

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            TW+A+   Y+   + RE ++LF  MV+ G+ PD +   ++L AC + GD ++G+ +   
Sbjct: 178 VTWTALFSGYTTAGKHREAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKH 237

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           + ++ M     VR +++ +Y KCGK+  AR  F+SM EKD V W++MI GY       E 
Sbjct: 238 MEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEG 297

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV---AMEMVKRMESLGITPDVFTWTCM 299
              F +M +E +K    +    + S   LG  D+    + ++ R E L    ++F    +
Sbjct: 298 IEFFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL---TNLFMANAL 354

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           I  +A+ G  ++  ++FKEM    +    V + +AIS       + +   +     K+G 
Sbjct: 355 IDMYAKCGAMARGFEVFKEMKEKDI----VIMNAAISGLAKNGHVKLSFAVFGQTEKLGI 410

Query: 360 TDDVLVGNSLINMYSKCEE---LEAAERVFDMIK-----DKDVYSWNSMIAGYCQAGYCG 411
           + D   G++ + +   C     ++   R F+ I       + V  +  M+  + +AG   
Sbjct: 411 SPD---GSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLD 467

Query: 412 KAYELFIKMQESDVPPNVITWNVLISG 438
            AY L   M    + PN I W  L+SG
Sbjct: 468 DAYRLICDMP---MRPNAIVWGALLSG 491



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 106/247 (42%), Gaps = 42/247 (17%)

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
           N +K++H  ++   L     ++N L+          YS  +F      +I  +N+LI G+
Sbjct: 27  NHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLINGF 86

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC---YQI 633
           V +  +H  LDLF  ++  GL  +  TF  ++ A + A    LG  +   + +C   + +
Sbjct: 87  VNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDV 146

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP----------------------------- 664
             M    ++++ +Y  SG+L +A +  E++P                             
Sbjct: 147 AAM----TSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKK 202

Query: 665 -----IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE-PGDVLIQRLILQIYAICGK 718
                + PDS     +L+AC   G++D     ++ + ++E   +  ++  ++ +YA CGK
Sbjct: 203 MVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGK 262

Query: 719 PEDALKV 725
            E A  V
Sbjct: 263 MEKARSV 269


>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
 gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
          Length = 582

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 198/590 (33%), Positives = 305/590 (51%), Gaps = 56/590 (9%)

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           G  PN  T   AI +C  L     G ++H    K G   +  V  SLI+MY KC  ++ A
Sbjct: 5   GASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSLIDNA 64

Query: 383 ERVFDMIKD--KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-------- 432
            ++FD      K    +NS+++GY           LF +M+E  V  N +T         
Sbjct: 65  RKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCG 124

Query: 433 ---------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
                                      N L++ Y+++G  D    LF  M      ++  
Sbjct: 125 IPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEM-----PRKGL 179

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
            +WN++I GY Q G  NN L ++++M+S  F P+ +T++ VL +CA+L A +  KE+   
Sbjct: 180 ITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEVE-- 237

Query: 526 VLRRSLE----SSLPVMN-SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
              R +E    SS P +N +L++ YA+ GN+  +R IFDGM  K +++W ++I GY +HG
Sbjct: 238 ---RKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHG 294

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
               A+ LFD+M   G+KP+   F+S++ A S AG+ + G   F  +   Y + P  EHY
Sbjct: 295 QGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHY 354

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
           S M+DL GR+G+L EA E IE M +  D ++W ALL AC+IH N++LA LA E++ +LEP
Sbjct: 355 SCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEP 414

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
            +     L+  +Y   G  E  L+VR L R+   +   G  ++E K  V+ F  G  +  
Sbjct: 415 TNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHP 474

Query: 761 YSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEIS--GIHSEKLALAFALIGSSQAPHT 818
            ++ +Y  L  + EN+            E  +E ++  G+HSEKLA+AFAL+ + +    
Sbjct: 475 QTNEIYKKLNEL-ENLVKDLDGCKKNDHERREEYLNSMGVHSEKLAVAFALLNTRKETEI 533

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           I I+KN+R+C  CH   K VS +   +  + D+   HHFKNG CSC +YW
Sbjct: 534 I-IIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 173/367 (47%), Gaps = 16/367 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N R+ + + +   +   G ++   T + L+Q C    ++ L   +H F +    ++D  V
Sbjct: 91  NSRVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSV 150

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              LL++Y K G +D  R++F++M  + L TW+AMI  Y+++     V+EL+  M   G 
Sbjct: 151 GNCLLTMYVKSGEIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGF 210

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD      +L +C + G    GK +   +   G S    + N+++ +Y +CG L  AR 
Sbjct: 211 CPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARD 270

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ M  K  V+W ++I GY   G+ + A  LFD+M R  IK     F  ++ + +  G 
Sbjct: 271 IFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGL 330

Query: 274 CDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            +  ++    ME   G+ P    ++CM+    + GR ++A +L + M    V  +G    
Sbjct: 331 TNKGLDYFGVMERKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQ---VRADGALWG 387

Query: 333 SAISAC-----TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
           + + AC      +L  LA    I       G+   VL    L N+Y++   LE   RV  
Sbjct: 388 ALLGACKIHRNVELAELAFEQVIELEPTNTGYY--VL----LSNVYTEAGNLEGILRVRM 441

Query: 388 MIKDKDV 394
           +++ + +
Sbjct: 442 LMRKRKL 448



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 188/413 (45%), Gaps = 37/413 (8%)

Query: 89  IDVFVKTKLLSVYAKCGCLDDAREVF-EDMRERNLYT-WSAMIGAYSRDQRWREVVELFF 146
           ++ FV+T L+S+Y KC  +D+AR++F E+ + R L   +++++  Y+ + R ++VV LF 
Sbjct: 43  LEPFVQTSLISMYGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFC 102

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            M + G+  +      ++Q CG  G+   G  +H   +K G+     V N +L +YVK G
Sbjct: 103 EMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSG 162

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           ++   R+ F+ M  K  + WN+MI+GY Q G  +    L+ +M  +      +T   ++ 
Sbjct: 163 EIDCGRKLFDEMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLS 222

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVF-------------------------------T 295
           S   LG   V  E+ ++ME  G + + F                               +
Sbjct: 223 SCAHLGALSVGKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVS 282

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS-LA 354
           WT +I G+  +G+   A+ LF EM   G+ P+G    S +SAC+       G++    + 
Sbjct: 283 WTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVME 342

Query: 355 VKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
            K G        + ++++  +   L EA E +  M    D   W +++ G C+     + 
Sbjct: 343 RKYGLRPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALL-GACKIHRNVEL 401

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
            EL  + Q  ++ P    + VL+S         E +   + + +  K+K++  
Sbjct: 402 AELAFE-QVIELEPTNTGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPG 453



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 126/509 (24%), Positives = 206/509 (40%), Gaps = 113/509 (22%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M++ G  P+ F FP  +++C        GK +H  V K G          +L  +V+   
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTG---------CLLEPFVQ--- 48

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
                               S+IS Y +    D A +LFD+  +   KL V         
Sbjct: 49  -------------------TSLISMYGKCSLIDNARKLFDENPQSR-KLTVC-------- 80

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           YN L                            +SG+A N R    + LF EM  +GV  N
Sbjct: 81  YNSL----------------------------LSGYALNSRVKDVVVLFCEMRELGVEIN 112

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
           GVT+   +  C     L +GM +H   VK G   D  VGN L+ MY K  E++   ++FD
Sbjct: 113 GVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFD 172

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------------- 432
            +  K + +WN+MI GY Q G      EL+ +M+     P+ +T                
Sbjct: 173 EMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSV 232

Query: 433 --------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLI 472
                               N L++ Y + GN  +A D+F  M       ++  SW ++I
Sbjct: 233 GKEVERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGM-----PVKSVVSWTAII 287

Query: 473 AGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SL 531
            GY   GQ   A+G+F +M      P+    +SVL AC++   +NK  +  G + R+  L
Sbjct: 288 GGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGL 347

Query: 532 ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLHGFWHAALDLFD 590
                  + ++D   ++G +  +R + + M  + D   W +L+    +H     A   F+
Sbjct: 348 RPGAEHYSCMVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFE 407

Query: 591 QMKSFGLKP-NRGTFLSIILAHSLAGMVD 618
           Q+    L+P N G ++ +   ++ AG ++
Sbjct: 408 QV--IELEPTNTGYYVLLSNVYTEAGNLE 434


>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
           [Vitis vinifera]
          Length = 836

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 228/845 (26%), Positives = 403/845 (47%), Gaps = 89/845 (10%)

Query: 10  QQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACID 69
           ++ +SL   + +P   ++ +  L   G+ ++A+ +            + T+ +LL+ C  
Sbjct: 9   RKFYSLRQTEVSPSI-NSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCAS 67

Query: 70  SNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER-----NLY 123
            ++++  R +HA  + +  + D ++ T L+++Y KCG L  A +VF+ M E      ++ 
Sbjct: 68  LSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDIT 127

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
            W+ +I  Y +   + E +  F  M +   +                    AG+ +H  +
Sbjct: 128 VWNPVIDGYFKYGHFEEGLAQFCRMQELSWY-------------------MAGRQIHGYI 168

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG-VAWNSMISGYFQIGENDEA 242
           I+        +  +++ +Y  C + + A   F  ++ +   VAWN MI G+ + G  +++
Sbjct: 169 IRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKS 228

Query: 243 HRLFDKMCREEIKLGVVTFNIL--------IRSYNQLGQCDV------------------ 276
             L+     E  KL   +F           +  + +   CDV                  
Sbjct: 229 LELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTM 288

Query: 277 -----AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
                ++E  K++    +  +V     MIS F  NGR   AL L+ +M       +  TI
Sbjct: 289 YAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTI 348

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           +S +S C+ + +   G  +H+  +K     +V + ++L+ MY KC   E A+ VF  +K+
Sbjct: 349 SSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADSVFYTMKE 408

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQ------ESDVPPNVITWNV---------LI 436
           +DV +W SMIAG+CQ      A +LF  M+      +SDV  +VI+  +         LI
Sbjct: 409 RDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLI 468

Query: 437 SGY-IQNGNEDEA------VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQK 481
            G+ I+ G E +       VD++ + G  +  +        +N  +WNS+I+ Y   G  
Sbjct: 469 HGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLP 528

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
             ++ +  ++    FY + V+I +VL A + + A  K K +H   +R  + S L V N+L
Sbjct: 529 EMSINLLPQILQHGFYLDSVSITTVLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENAL 588

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
           ID Y K G + Y++ IF+ M  ++++TWNS+I GY  HG    A+ LF +MK     P+ 
Sbjct: 589 IDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDE 648

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
            TFL++I + S +GMV+ G  +F  +   Y + P +EHY++++DL GR+G+L++A  FI 
Sbjct: 649 VTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPRMEHYASVVDLLGRAGRLDDAYSFIR 708

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPED 721
            MPI+ D S+W  LL ACR H N++L  L  + L  +EP        +L +Y      + 
Sbjct: 709 GMPIDADRSVWLCLLFACRAHRNMELGELVADNLLKMEPARGSNYVPLLNLYGEVEMWDR 768

Query: 722 ALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS- 780
           A  +R   +    + S G  WIEVKN V  F +G  S +    +Y  L ++  N+  +  
Sbjct: 769 AANLRASMKGRGLKKSPGCSWIEVKNRVDVFFSGDSSSTRRIEIYKTLSSLKSNMEGKGC 828

Query: 781 SHSGL 785
           S+ G+
Sbjct: 829 SYEGI 833


>gi|413938666|gb|AFW73217.1| hypothetical protein ZEAMMB73_724608 [Zea mays]
          Length = 610

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 194/586 (33%), Positives = 311/586 (53%), Gaps = 32/586 (5%)

Query: 295 TWTCMISGFAQNG---RTSQALDLFKEMSFVGVMPNGVTITSAIS---ACTDLKALAMGM 348
           T+ C+++G+A+     R + A  LF  +      P+ V+  + +S   AC D+       
Sbjct: 45  TYNCLLAGYAKASGLIRLADARRLFDSIPH----PDTVSYNTLLSCHFACGDIDGARR-- 98

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
              ++ VK     DV   N++++  SK    E A  +F ++  ++  SWN+M+A    +G
Sbjct: 99  VFSTMPVK-----DVTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWNAMVAALACSG 153

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
             G A +LF    E     + I W  ++SGY+  GN  +A++ F  M       RN  SW
Sbjct: 154 DMGAAEDLFRNAPEKT---DAILWTAMVSGYMDTGNVQKAMEFFGAMPV-----RNLVSW 205

Query: 469 NSLIAGYQQLGQKNNALGVFRKM-QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           N+++AGY +  + ++AL VF+ M + S   PN  T+ SVL  C+ L A    +++H   +
Sbjct: 206 NAVVAGYVKNSRADDALRVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCM 265

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           +  L  ++ V  SL+  Y K G++  +  +FD MS+KDI+ WN++I GY  HG    A+ 
Sbjct: 266 KLPLSRNVTVGTSLLSMYCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIK 325

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           LF++MK  G+ P+  T L+++ A    G+ D G + F ++ E Y+I P I+HYS M+DL 
Sbjct: 326 LFEKMKDEGVVPDWITLLAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLL 385

Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
            R+G LE A+  I  MP EP  S +  LLTACR++ N++ A  A  +L + +P +     
Sbjct: 386 CRAGLLERAVNMIHSMPFEPHPSAYGTLLTACRVYKNLEFAEFAARKLIEQDPQNAGAYV 445

Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
            +  IYA+  K  D  +VR+  ++N    + G  W+E+K + + F +         L++ 
Sbjct: 446 QLANIYAVANKWADVSRVRRWMKDNAVVKTPGYSWMEIKGVRHEFRSNDRLHPQLGLIHD 505

Query: 768 WLQNVPENVTARSSHSGL-----CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
            L  +   + A      L      +E+  K ++   HSEKLA+AF LI +S    T+RI 
Sbjct: 506 KLDRLQMLMKAMGYVPDLDFALHDVEDSLKSQMLMRHSEKLAIAFGLISTSPG-MTLRIF 564

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN+R+C  CH  AK +S +   EI L D+   HHF+ G CSCGDYW
Sbjct: 565 KNLRICGDCHNAAKLISKIEDREIILRDTTRFHHFRGGHCSCGDYW 610



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 171/378 (45%), Gaps = 70/378 (18%)

Query: 196 NSVLAVYVKCGKLIW---ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
           N +LA Y K   LI    ARR F+S+   D V++N+++S +F  G+ D A R+F  M  +
Sbjct: 47  NCLLAGYAKASGLIRLADARRLFDSIPHPDTVSYNTLLSCHFACGDIDGARRVFSTMPVK 106

Query: 253 EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME------------------SLGITPDVF 294
           +    V ++N ++   ++ G  + A  M + M                    +G   D+F
Sbjct: 107 D----VTSWNTMVSGLSKNGASEEAAAMFRIMPVRNAVSWNAMVAALACSGDMGAAEDLF 162

Query: 295 T----------WTCMISGFAQNGRTSQALDLFKEMSFVG--------------------- 323
                      WT M+SG+   G   +A++ F  M                         
Sbjct: 163 RNAPEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDAL 222

Query: 324 -----------VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
                      V PN  T++S +  C++L AL  G ++H   +K+  + +V VG SL++M
Sbjct: 223 RVFKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSM 282

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y KC +L  A +VFD +  KD+ +WN+MI+GY Q G   +A +LF KM++  V P+ IT 
Sbjct: 283 YCKCGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITL 342

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
             +++  I  G  D  +  F+ M +  K++     ++ ++    + G    A+ +   M 
Sbjct: 343 LAVLTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMP 402

Query: 493 SSCFYPNCVTILSVLPAC 510
              F P+     ++L AC
Sbjct: 403 ---FEPHPSAYGTLLTAC 417



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 175/382 (45%), Gaps = 23/382 (6%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +  L  NG   EA  +   +  + A V  N  +  L AC  S  +  A  L  F N 
Sbjct: 112 NTMVSGLSKNGASEEAAAMFRIMPVRNA-VSWNAMVAAL-AC--SGDMGAAEDL--FRNA 165

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
             + D  + T ++S Y   G +  A E F  M  RNL +W+A++  Y ++ R  + + +F
Sbjct: 166 PEKTDAILWTAMVSGYMDTGNVQKAMEFFGAMPVRNLVSWNAVVAGYVKNSRADDALRVF 225

Query: 146 FLMVQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
             MV+D +  P+      +L  C N      G+ +H   +KL +S    V  S+L++Y K
Sbjct: 226 KTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYCK 285

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL 264
           CG L  A + F+ M  KD VAWN+MISGY Q G   +A +LF+KM  E +    +T   +
Sbjct: 286 CGDLNDACKVFDEMSTKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWITLLAV 345

Query: 265 IRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           + +    G CD  ++  + M E+  I P +  ++CM+    + G   +A+++   M F  
Sbjct: 346 LTACIHTGLCDFGIQCFETMQEAYKIEPQIDHYSCMVDLLCRAGLLERAVNMIHSMPF-- 403

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS---LINMYSKCEELE 380
             P+     + ++AC   K L    E    A +     D     +   L N+Y+   +  
Sbjct: 404 -EPHPSAYGTLLTACRVYKNL----EFAEFAARKLIEQDPQNAGAYVQLANIYAVANKWA 458

Query: 381 AAERVFDMIKDKDV-----YSW 397
              RV   +KD  V     YSW
Sbjct: 459 DVSRVRRWMKDNAVVKTPGYSW 480



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 140/309 (45%), Gaps = 27/309 (8%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTK 96
           RL +A  + DSI      V  NT ++   AC D   I  AR++ + + +    DV     
Sbjct: 61  RLADARRLFDSI-PHPDTVSYNTLLSCHFACGD---IDGARRVFSTMPVK---DVTSWNT 113

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           ++S  +K G  ++A  +F  M  RN  +W+AM+ A +         +LF    +     D
Sbjct: 114 MVSGLSKNGASEEAAAMFRIMPVRNAVSWNAMVAALACSGDMGAAEDLFRNAPEK---TD 170

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR--NSVLAVYVKCGKLIWARRF 214
             L+  ++      G  + G +  ++    G   VR +   N+V+A YVK  +   A R 
Sbjct: 171 AILWTAMVS-----GYMDTGNVQKAMEF-FGAMPVRNLVSWNAVVAGYVKNSRADDALRV 224

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE-----EIKLGVVTFNILIRSYN 269
           F++M E   V  N+       +G ++ +   F +   +      +   V     L+  Y 
Sbjct: 225 FKTMVEDSIVQPNASTLSSVLLGCSNLSALGFGRQVHQWCMKLPLSRNVTVGTSLLSMYC 284

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           + G  + A ++   M     T D+  W  MISG+AQ+G   QA+ LF++M   GV+P+ +
Sbjct: 285 KCGDLNDACKVFDEMS----TKDIVAWNAMISGYAQHGGGMQAIKLFEKMKDEGVVPDWI 340

Query: 330 TITSAISAC 338
           T+ + ++AC
Sbjct: 341 TLLAVLTAC 349



 Score = 43.1 bits (100), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 18/204 (8%)

Query: 526 VLRRSLES-SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
           +LR SL + + P+    +    + G++  +   F     K   T+N L+ GY        
Sbjct: 2   ILRPSLLAVARPLSTVAVAAAVRRGDLAGAEEAFASTQLKTTTTYNCLLAGYAKAS---G 58

Query: 585 ALDLFDQMKSFGLKPNRGT--FLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
            + L D  + F   P+  T  + +++  H   G +D  ++VF ++      +  +  ++ 
Sbjct: 59  LIRLADARRLFDSIPHPDTVSYNTLLSCHFACGDIDGARRVFSTMP-----VKDVTSWNT 113

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP-- 700
           M+    ++G  EEA      MP+  ++  W A++ A    G++     A E LF   P  
Sbjct: 114 MVSGLSKNGASEEAAAMFRIMPVR-NAVSWNAMVAALACSGDMG----AAEDLFRNAPEK 168

Query: 701 GDVLIQRLILQIYAICGKPEDALK 724
            D ++   ++  Y   G  + A++
Sbjct: 169 TDAILWTAMVSGYMDTGNVQKAME 192


>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g16835, mitochondrial; AltName: Full=Protein DYW10;
           Flags: Precursor
 gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 656

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 198/608 (32%), Positives = 315/608 (51%), Gaps = 44/608 (7%)

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           +F    +I+   ++G    AL +F  M       N +T  S +   +  K  +  ME H 
Sbjct: 61  IFPLNKIIARCVRSGDIDGALRVFHGMR----AKNTITWNSLLIGIS--KDPSRMMEAHQ 114

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGK 412
           L  ++    D    N +++ Y +    E A+  FD +  KD  SWN+MI GY + G   K
Sbjct: 115 LFDEIP-EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEK 173

Query: 413 AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA------------------------ 448
           A ELF  M E     N ++WN +ISGYI+ G+ ++A                        
Sbjct: 174 ARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMK 229

Query: 449 ---VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
              V+L + M K+  V +N  +WN++I+GY +  +  + L +FR M      PN   + S
Sbjct: 230 AKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSS 289

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
            L  C+ L A    ++IH  V + +L + +  + SLI  Y K G +  +  +F+ M  KD
Sbjct: 290 ALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKD 349

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
           ++ WN++I GY  HG    AL LF +M    ++P+  TF++++LA + AG+V++G   F 
Sbjct: 350 VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFE 409

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
           S+   Y++ P  +HY+ M+DL GR+GKLEEA++ I  MP  P ++++  LL ACR+H N+
Sbjct: 410 SMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNV 469

Query: 686 DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV 745
           +LA  A E+L  L   +      +  IYA   + ED  +VRK  +E+      G  WIE+
Sbjct: 470 ELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEI 529

Query: 746 KNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGL-----CIEEEEKEEISGIHS 800
           +N V+ F +        D ++  L+ + + +        L      +EEE+KE++   HS
Sbjct: 530 RNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHS 589

Query: 801 EKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNG 860
           EKLA+AF  I   Q    I++ KN+R+C  CH+  K++S +   EI + D+   HHFK+G
Sbjct: 590 EKLAVAFGCIKLPQGSQ-IQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDG 648

Query: 861 QCSCGDYW 868
            CSCGDYW
Sbjct: 649 SCSCGDYW 656



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 217/422 (51%), Gaps = 21/422 (4%)

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD-QRWREVVELFFLMV 149
           +F   K+++   + G +D A  VF  MR +N  TW++++   S+D  R  E  +LF  + 
Sbjct: 61  IFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIP 120

Query: 150 QDGLFPDDFLFPKILQACGNCGDFE-AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           +    PD F +  +L       +FE A      +  K   S      N+++  Y + G++
Sbjct: 121 E----PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASW-----NTMITGYARRGEM 171

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             AR  F SM EK+ V+WN+MISGY + G+ ++A   F    +     GVV +  +I  Y
Sbjct: 172 EKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFF----KVAPVRGVVAWTAMITGY 227

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
            +  + ++A  M K M    +  ++ TW  MISG+ +N R    L LF+ M   G+ PN 
Sbjct: 228 MKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNS 284

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
             ++SA+  C++L AL +G +IH +  K    +DV    SLI+MY KC EL  A ++F++
Sbjct: 285 SGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEV 344

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           +K KDV +WN+MI+GY Q G   KA  LF +M ++ + P+ IT+  ++      G  +  
Sbjct: 345 MKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG 404

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
           +  F+ M ++ KV+     +  ++    + G+   AL + R M    F P+     ++L 
Sbjct: 405 MAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMP---FRPHAAVFGTLLG 461

Query: 509 AC 510
           AC
Sbjct: 462 AC 463



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 168/348 (48%), Gaps = 39/348 (11%)

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ-AGYCGKAYELFIK 419
           D +   N +I    +  +++ A RVF  ++ K+  +WNS++ G  +      +A++LF +
Sbjct: 59  DQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDE 118

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           + E    P+  ++N+++S Y++N N ++A   F RM   D      ASWN++I GY + G
Sbjct: 119 IPE----PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKD-----AASWNTMITGYARRG 169

Query: 480 QKNNALGVFRKMQSSCFYPNCVT---ILSVLPACAYLVASN---KVKEIHGCVLRRSLES 533
           +   A  +F  M       N V+   ++S    C  L  ++   KV  + G V       
Sbjct: 170 EMEKARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVV------- 218

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQM 592
                 ++I  Y K+  +  +  +F  M+ +K+++TWN++I GYV +      L LF  M
Sbjct: 219 ---AWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM 275

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE---CYQIIPMIEHYSAMIDLYGR 649
              G++PN     S +L  S    + LG+++   +++   C  +  +    +++I +Y +
Sbjct: 276 LEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTAL----TSLISMYCK 331

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
            G+L +A +  E M  + D   W A+++    HGN D A+     + D
Sbjct: 332 CGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNADKALCLFREMID 378



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 128/305 (41%), Gaps = 48/305 (15%)

Query: 80  HAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
           H   + + E D F    +LS Y +    + A+  F+ M  ++  +W+ MI  Y+R     
Sbjct: 113 HQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEME 172

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           +  ELF+ M++     ++  +  ++     CGD E       +    G+        +++
Sbjct: 173 KARELFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAW----TAMI 224

Query: 200 AVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK--- 255
             Y+K  K+  A   F+ M   K+ V WN+MISGY +    ++  +LF  M  E I+   
Sbjct: 225 TGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNS 284

Query: 256 -------LG-------------------------VVTFNILIRSYNQLGQCDVAMEMVKR 283
                  LG                         V     LI  Y + G+   A ++ + 
Sbjct: 285 SGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEV 344

Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
           M+      DV  W  MISG+AQ+G   +AL LF+EM    + P+ +T  + + AC     
Sbjct: 345 MKK----KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGL 400

Query: 344 LAMGM 348
           + +GM
Sbjct: 401 VNIGM 405



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 75/138 (54%), Gaps = 1/138 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-DVFV 93
           N R  + + +  ++  +G +   +   + L  C + +++ L R++H  ++  T   DV  
Sbjct: 262 NSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTA 321

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+S+Y KCG L DA ++FE M+++++  W+AMI  Y++     + + LF  M+ + +
Sbjct: 322 LTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKI 381

Query: 154 FPDDFLFPKILQACGNCG 171
            PD   F  +L AC + G
Sbjct: 382 RPDWITFVAVLLACNHAG 399


>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
 gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
          Length = 794

 Score =  320 bits (820), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 215/707 (30%), Positives = 343/707 (48%), Gaps = 95/707 (13%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM--SCVRRVRNSVLAVYVKCGKLIWARR 213
           D F  P   ++        A + +H   ++  +       V N++L  Y +CG L  A  
Sbjct: 56  DRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALA 115

Query: 214 FFESMDEKDGVAWNSMISGY--FQ--IGEND-------EAHRLFD----------KMCRE 252
            F++M  +D V +NS+I+    F+  +   D       E H L                E
Sbjct: 116 LFDAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLAE 175

Query: 253 EIKLGV-----------------VTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD-VF 294
           +++LG                    FN L+  Y +LG  D A  +   + +  +    V 
Sbjct: 176 DLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVV 235

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           TW  M+S   Q+GR  +A+++  +M   GV P+GVT  SA+ AC+ L+ L++G E+H+  
Sbjct: 236 TWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYV 295

Query: 355 VK-MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK--DKDVYSWNSMIAGYCQAGYCG 411
           +K      +  V ++L++MY+  E + AA  VFDM+   ++ +  WN+MI GY QAG   
Sbjct: 296 LKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDE 355

Query: 412 KAYELFIKMQESD--VPPNVITWNVLIS--------------GYI-QNGNEDEA------ 448
            A ELF +M+     VP       VL S              GY+ + G  D        
Sbjct: 356 DALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNAL 415

Query: 449 VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY--- 497
           +DL+ R+G  D  +        R+  SWN+LI G    G   +A  + R+MQ    +   
Sbjct: 416 MDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDA 475

Query: 498 ---------------PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
                          PN +T++++LP CA L A  + KEIHG  +R +L+S + V ++L+
Sbjct: 476 ATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALV 535

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM-KSFGLKPNR 601
           D YAK G +  SR +FD +  +++ITWN LI  Y +HG    A+ LFD+M  S   KPN 
Sbjct: 536 DMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNE 595

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
            TF++ + A S +GMVD G ++F S+   + + P  + ++  +D+ GR+G+L+EA   I 
Sbjct: 596 VTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEAYRIIS 655

Query: 662 DM-PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
            M P E   S W + L ACR+H N+ L  +A ERLF+LEP +     L+  IY+  G  E
Sbjct: 656 SMEPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEASHYVLLCNIYSAAGLWE 715

Query: 721 DALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
            + +VR   R+       G  WIE+  +++ F+ G  +   S L+++
Sbjct: 716 KSSEVRSRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHA 762



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 204/443 (46%), Gaps = 58/443 (13%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +  L  +GR  EAI VL  +  +G +    T+ + L AC     + L R++HA++  
Sbjct: 238 NTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYVLK 297

Query: 86  VTEI--DVFVKTKLLSVYAKCGCLDDAREVFE--DMRERNLYTWSAMIGAYSRDQRWREV 141
             ++  + FV + L+ +YA    +  AR VF+     ER L  W+AMI  Y++     + 
Sbjct: 298 DADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDEDA 357

Query: 142 VELFFLM-VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
           +ELF  M  + G+ P +     +L +C     F   + +H  V+K GM+    V+N+++ 
Sbjct: 358 LELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNALMD 417

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y + G +  AR  F +++ +D V+WN++I+G    G   +A +                
Sbjct: 418 LYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQ---------------- 461

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
              L+R   Q G+                    FT      G A                
Sbjct: 462 ---LVREMQQQGR--------------------FTDAATEDGIAGADEEP---------- 488

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
              V+PN +T+ + +  C  L A A G EIH  AV+     DV VG++L++MY+KC  L 
Sbjct: 489 ---VVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLA 545

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD-VPPNVITWNVLISGY 439
            +  VFD +  ++V +WN +I  Y   G   +A  LF +M  SD   PN +T+   ++  
Sbjct: 546 LSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALAAC 605

Query: 440 IQNGNEDEAVDLFQRMGKNDKVK 462
             +G  D  +++F+ M +N  V+
Sbjct: 606 SHSGMVDRGLEMFRSMKRNHGVE 628



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 134/314 (42%), Gaps = 25/314 (7%)

Query: 31  FLCG---NGRLNEAITVLDSIATQGAKVRRNTYI-NLLQACIDSNSIHLARKLHAFLNLV 86
            +CG    G   +A+ +   + T+   V   T I  +L +C  S +      +H ++   
Sbjct: 344 MICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKR 403

Query: 87  TEID-VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
              D  FV+  L+ +YA+ G +D AR +F  +  R++ +W+ +I         R+  +L 
Sbjct: 404 GMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLV 463

Query: 146 FLMVQDGLF------------------PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
             M Q G F                  P++     +L  C        GK +H   ++  
Sbjct: 464 REMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHA 523

Query: 188 MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
           +     V ++++ +Y KCG L  +R  F+ +  ++ + WN +I  Y   G  DEA  LFD
Sbjct: 524 LDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFD 583

Query: 248 KM-CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQ 305
           +M   +E K   VTF   + + +  G  D  +EM + M+ + G+ P      C +    +
Sbjct: 584 RMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGR 643

Query: 306 NGRTSQALDLFKEM 319
            GR  +A  +   M
Sbjct: 644 AGRLDEAYRIISSM 657


>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 191/617 (30%), Positives = 323/617 (52%), Gaps = 41/617 (6%)

Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
           +  D+ +W+ +IS + + GR  +A+ LF  M  +G+ PN    ++ I + TD   L +G 
Sbjct: 153 VDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGK 212

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           +IHS  +++GF  ++ +   + NMY KC  L+ AE   + +  K+  +   ++ GY +A 
Sbjct: 213 QIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAA 272

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLI----------------SGYIQNGNEDEA---- 448
               A  LF KM    V  +   +++++                S  I+ G E E     
Sbjct: 273 RNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGT 332

Query: 449 --VDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
             VD + +  + +  ++        N  SW++LIAGY Q GQ + AL VF+ ++S     
Sbjct: 333 PLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLL 392

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           N     ++  AC+ +       +IH   +++ L + L   +++I  Y+K G + Y+   F
Sbjct: 393 NSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAF 452

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
             +   D + W ++IC +  HG    AL LF +M+  G++PN  TF+ ++ A S +G+V 
Sbjct: 453 LTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVK 512

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            GKK+  S+++ Y + P I+HY+ MID+Y R+G L+EA+E I  +P EPD   W++LL  
Sbjct: 513 EGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGG 572

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
           C  H N+++ ++A + +F L+P D     ++  +YA+ GK ++A + RK+  E   R   
Sbjct: 573 CWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEV 632

Query: 739 GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEE-------EE 791
              WI VK  V+ FV G      ++ +YS L+ +  N + + S   L  EE       E 
Sbjct: 633 SCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKEL--NFSFKKSKERLLNEENALCDFTER 690

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           KE++   HSE+LA+A+ LI ++ A   I + KN R C  CH+ AK VS++   E+ + D 
Sbjct: 691 KEQLLD-HSERLAIAYGLICTA-ADTPIMVFKNTRSCKDCHDFAKRVSIVTGRELVVRDG 748

Query: 852 KCLHHFKNGQCSCGDYW 868
              HH  +G+CSC DYW
Sbjct: 749 NRFHHINSGECSCRDYW 765



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/543 (25%), Positives = 247/543 (45%), Gaps = 44/543 (8%)

Query: 4   WILTTFQQLHSLLTKKSNPR--FRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYI 61
           W+  + +  HS L    N +    + HL  L   G L E    + ++   G  +   +Y 
Sbjct: 39  WV--SLKSSHSSLRTHQNQQGQVENLHLISLAKQGNLREVHEFIRNMDKVGISINPRSYE 96

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
            L + C    ++   +  H  L  +   + F+   +L +Y  C     A   F+ + +++
Sbjct: 97  YLFKMCGTLGALSDGKLFHNRLQRMANSNKFIDNCILKMYCDCKSFTSAERFFDKIVDQD 156

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
           L +WS +I AY+ + R  E V LF  M+  G+ P+  +F  ++ +  +    + GK +HS
Sbjct: 157 LSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHS 216

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
            +I++G +    +   +  +YVKCG L  A      M  K+ VA   ++ GY +   N +
Sbjct: 217 QLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRD 276

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI------------ 289
           A  LF KM  E ++L    F+I++++   LG      ++      LG+            
Sbjct: 277 ALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPLVD 336

Query: 290 -------------------TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
                               P+ F+W+ +I+G+ Q+G+  +AL++FK +   GV+ N   
Sbjct: 337 FYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFI 396

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
            T+   AC+ +  L  G +IH+ A+K G    +   +++I+MYSKC +++ A + F  I 
Sbjct: 397 YTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFLTID 456

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYE---LFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
             D  +W ++I   C   Y GKA+E   LF +MQ S V PN +T+  L++    +G   E
Sbjct: 457 KPDTVAWTAII---CAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKE 513

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
              +   M     V      +N +I  Y + G    AL V R +    F P+ ++  S+L
Sbjct: 514 GKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLP---FEPDVMSWKSLL 570

Query: 508 PAC 510
             C
Sbjct: 571 GGC 573


>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  320 bits (819), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 217/768 (28%), Positives = 358/768 (46%), Gaps = 124/768 (16%)

Query: 64  LQACIDSNSIHLARKLHA---FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           ++ C    SI +ARKLHA   F+ L + I  F++  LL++Y+ CG + DA  VF  +   
Sbjct: 11  MKECASLRSIPIARKLHAQLIFMGLKSSI--FLQNHLLNMYSNCGLISDAYRVFGGIMFP 68

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQ----------DGLFPDDFLFPKILQACGNC 170
           N+Y+W+ MI  ++   + RE  +LF  M +           G F +  L   I +A G+ 
Sbjct: 69  NVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEATI-KASGSL 127

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
           G  +    +H    K        V  SVL +Y+KCG + +A++ F          WNSMI
Sbjct: 128 GYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMI 187

Query: 231 SGYFQIGENDEAHRLFDKMCREEI-------------KLGVVTFNILIRSYNQ------- 270
            GY + G   +A  LF KM   +                G  T N  +  +NQ       
Sbjct: 188 YGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSM 247

Query: 271 -----LGQCDVAMEM---------VKRMESL---------------------------GI 289
                L  C    ++         + RME                             G+
Sbjct: 248 TYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESARQVFDGL 307

Query: 290 TP-DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
           T  +  +WT +I G AQ G   +AL LF +M  V V  +  T+ + +  C   K +++G 
Sbjct: 308 TEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGE 367

Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
           ++H+  +  G    V V N+L+ MY+KC ++  A   F+++  +D+              
Sbjct: 368 QLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDI-------------- 413

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                                I+W  +I+ + Q G+ ++A + F +M +     RN  SW
Sbjct: 414 ---------------------ISWTAMITAFSQAGDVEKAREYFDKMPE-----RNVISW 447

Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
           NS++A Y Q G     L V+ +M       + +T  + + ACA L       +I     +
Sbjct: 448 NSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEK 507

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
               S++ V NS++  Y++ G I  ++ +F  +  K++++WN+++ GY  +G     +++
Sbjct: 508 LGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEI 567

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F++M + G  P++ +++S++   S +G V  G+  F S+T+ + I PM EH+  M+DL G
Sbjct: 568 FEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLG 627

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE---PGDVLI 705
           R+G+LE+A   I  MP +P+++IW ALL ACRIHGN  LA LA++ L +L+   PG    
Sbjct: 628 RAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYC- 686

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFV 753
             L+  IY+  GK +    VRKL R+   R + G  WIEV N V+ F 
Sbjct: 687 --LLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIEVDNRVHVFT 732



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 210/481 (43%), Gaps = 90/481 (18%)

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
           ++  C  L+++ +  ++H+  + MG    + + N L+NMYS C  +  A RVF  I   +
Sbjct: 10  SMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPN 69

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN--------- 444
           VYSWN+MI+G+  +G   +A +LF KM E D     ++WN ++SGY  NG          
Sbjct: 70  VYSWNTMISGFADSGQMREAEKLFEKMPERD----SVSWNSMMSGYFHNGELEATIKASG 125

Query: 445 --------------------------EDEAVDLFQRMGKNDKVKR--------NTASWNS 470
                                     E   +D++ + G  D  ++        +   WNS
Sbjct: 126 SLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNS 185

Query: 471 LIAGYQQLGQKNNALGVFRKMQ-------------------------------SSCFYPN 499
           +I GY + G    AL +F KM                                +  F PN
Sbjct: 186 MIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPN 245

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN--SLIDTYAKSGNIVYSRTI 557
            +T  SVL AC  +        +H  ++R  +E  L V     LID YAK G +  +R +
Sbjct: 246 SMTYASVLSACTSIYDLEWGAHLHARIVR--MEPCLDVYAGCGLIDMYAKCGRLESARQV 303

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
           FDG++  + ++W SLI G    GF   AL LF+QM+   +  ++ T  +++        +
Sbjct: 304 FDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDI 363

Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
            +G+++    T    +   +   +A++ +Y + G + +A    E MPI  D   W A++T
Sbjct: 364 SIGEQLHAH-TITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIR-DIISWTAMIT 421

Query: 678 ACRIHGNIDLAVLAIERLFDLEPG-DVLIQRLILQIYAICGKPEDALKVR-KLERENTRR 735
           A    G+++ A       FD  P  +V+    +L  Y   G  E+ LKV  ++ RE  + 
Sbjct: 422 AFSQAGDVEKA----REYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKT 477

Query: 736 N 736
           +
Sbjct: 478 D 478



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/460 (22%), Positives = 206/460 (44%), Gaps = 68/460 (14%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLN 84
           +T +  L  +G   E +     +  QG +    TY ++L AC     +     LHA  + 
Sbjct: 215 NTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVR 274

Query: 85  LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
           +   +DV+    L+ +YAKCG L+ AR+VF+ + E N  +W+++IG  ++     E + L
Sbjct: 275 MEPCLDVYAGCGLIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVL 334

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           F  M +  +  D F    +L  C +  D   G+ +H+  I  G+     V N+++ +Y K
Sbjct: 335 FNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAK 394

Query: 205 CGKLIW--------------------------------ARRFFESMDEKDGVAWNSMISG 232
           CG  +W                                AR +F+ M E++ ++WNSM++ 
Sbjct: 395 CGD-VWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLAT 453

Query: 233 YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
           Y Q G  +E  +++ +M RE +K   +TF+  I +   L    +  +++ + E LG + +
Sbjct: 454 YMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSN 513

Query: 293 V-------------------------------FTWTCMISGFAQNGRTSQALDLFKEMSF 321
           V                                +W  M++G+AQNG+  + +++F++M  
Sbjct: 514 VSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKMLN 573

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIH-SLAVKMGFTDDVLVGNSLINMYSKCEELE 380
           +G +P+ ++  S +S C+    ++ G     S+    G +        ++++  +  +LE
Sbjct: 574 IGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLE 633

Query: 381 AAERVFDMIKDK-DVYSWNSMIAGYCQAGYCGKAYELFIK 419
            A+ + + +  K +   W +++A  C+     K  EL +K
Sbjct: 634 QAKNLINQMPFKPNAAIWGALLAA-CRIHGNTKLAELAVK 672


>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 191/597 (31%), Positives = 309/597 (51%), Gaps = 47/597 (7%)

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
           A++   R+      P+V+ +T +I GF  +G   +A+ L+  M    ++P+   + S + 
Sbjct: 96  AIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILK 155

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           AC    AL  G E+HS A+K+GF+ + LV   ++ +Y KC EL  A RVF+         
Sbjct: 156 ACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFE--------- 206

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMG 456
                                      ++P +V+   V+IS Y   G  +EA  +F R+ 
Sbjct: 207 ---------------------------EMPEDVVASTVMISSYSDQGLVEEAGAVFSRVR 239

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
           + D     T  W ++I G+ +  + N AL  FR MQ     PN  TI+ VL AC+ L A 
Sbjct: 240 RKD-----TVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGAL 294

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
              + +H  + +  +E +L V N+LI+ Y++ G+I  ++T+FD M  +D+IT+N++I G 
Sbjct: 295 EIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGL 354

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
            ++G    A++LF  M    L+P   TF+ ++ A S  G+VD G ++F S+   Y++ P 
Sbjct: 355 SMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQ 414

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF 696
           IEHY  M+DL GR G+LEEA + I  M + PD  +   LL+AC++H N++L     + L 
Sbjct: 415 IEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELE 474

Query: 697 DLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG 756
           D    D     L+  +YA  GK ++A +VR   +E   +   G   IEV N ++ F+ G 
Sbjct: 475 DRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGD 534

Query: 757 WSESYSDLLYSWLQNVPENVTARSSHSG-----LCIEEEEKEEISGIHSEKLALAFALIG 811
                 + +Y  L+ +   +     H         IE+ EKE    +HSE+LA+ + LI 
Sbjct: 535 LRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAMHSERLAICYGLI- 593

Query: 812 SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S++    IR++KN+R+C  CH   K ++ +   +I + D    H+F+NG CSCGDYW
Sbjct: 594 STEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIVVRDRNRFHYFENGACSCGDYW 650



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/421 (30%), Positives = 212/421 (50%), Gaps = 43/421 (10%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D F+  +LL   +KC  +D A  +F+     N+Y ++A+I  +     + E ++L+  M+
Sbjct: 80  DPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRML 139

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            + + PD++L   IL+ACG+      G+ +HS  +KLG S  R VR  ++ +Y KCG+L 
Sbjct: 140 HESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELG 199

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            ARR FE M E D VA   MIS Y   G  +EA  +F ++ R+                 
Sbjct: 200 DARRVFEEMPE-DVVASTVMISSYSDQGLVEEAGAVFSRVRRK----------------- 241

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
                                 D   WT MI GF +N  T++AL+ F+ M    V PN  
Sbjct: 242 ----------------------DTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEF 279

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           TI   +SAC+ L AL +G  +HS   K     ++ VGN+LINMYS+C  ++ A+ VFD +
Sbjct: 280 TIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 339

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
           KD+DV ++N+MI+G    G   +A ELF  M    + P  +T+  +++     G  D   
Sbjct: 340 KDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGF 399

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
           ++F  M ++ +V+     +  ++    ++G+   A  + R M+ +   P+ + + ++L A
Sbjct: 400 EIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMT---PDHIMLGTLLSA 456

Query: 510 C 510
           C
Sbjct: 457 C 457



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 161/354 (45%), Gaps = 35/354 (9%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVT 87
           +D    +G   EAI +   +  +          ++L+AC    ++   R++H+  L L  
Sbjct: 119 IDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGF 178

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDM------------------------------ 117
             +  V+ +++ +Y KCG L DAR VFE+M                              
Sbjct: 179 SSNRLVRLRIMELYGKCGELGDARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRV 238

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
           R ++   W+AMI  + R++     +E F  M  + + P++F    +L AC   G  E G+
Sbjct: 239 RRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGR 298

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +HS + K  +     V N+++ +Y +CG +  A+  F+ M ++D + +N+MISG    G
Sbjct: 299 WVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNG 358

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTW 296
           ++ +A  LF  M    ++   VTF  ++ + +  G  D   E+   M     + P +  +
Sbjct: 359 KSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHY 418

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
            CM+    + GR  +A DL + M      P+ + + + +SAC   K L +G ++
Sbjct: 419 GCMVDLLGRVGRLEEAYDLIRTMKMT---PDHIMLGTLLSACKMHKNLELGEQV 469



 Score = 43.1 bits (100), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 52/251 (20%), Positives = 107/251 (42%), Gaps = 16/251 (6%)

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
           N+V  IH  ++R        ++  L+ + +K   I Y+  IF    + ++  + +LI G+
Sbjct: 63  NQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGF 122

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE----CYQ 632
           V  G +  A+ L+ +M    + P+     SI+ A      +  G++V     +      +
Sbjct: 123 VSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNR 182

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAI 692
           ++ +      +++LYG+ G+L +A    E+MP   D      ++++    G ++ A    
Sbjct: 183 LVRL-----RIMELYGKCGELGDARRVFEEMP--EDVVASTVMISSYSDQGLVEEAGAVF 235

Query: 693 ERLFDLEPGDVLIQRLILQIYAICGKPEDALKV-RKLERENTRRNSFG-QCWIEVKNLVY 750
            R   +   D +    ++  +    +   AL+  R ++ EN R N F   C +   + + 
Sbjct: 236 SR---VRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLG 292

Query: 751 TFVTGGWSESY 761
               G W  SY
Sbjct: 293 ALEIGRWVHSY 303


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 187/572 (32%), Positives = 312/572 (54%), Gaps = 37/572 (6%)

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
            S + +C   KA+  G ++H+   ++G + + L+   L+N+Y  C  L  A  +FD I  
Sbjct: 5   ASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISK 64

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG------------- 438
           ++++ WN MI GY   G    A  L+ +M++  + P+  T+  ++               
Sbjct: 65  RNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKI 124

Query: 439 ---YIQNGNEDEA------VDLFQRMG-------KNDKV-KRNTASWNSLIAGYQQLGQK 481
               I++G E +       +D++ + G         DK+ +R+   WNS++A Y Q GQ 
Sbjct: 125 HKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQP 184

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
           + +L + R M  +   P   T +  + A A      + KE+HG   R   ES+  V  +L
Sbjct: 185 DESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTAL 244

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
           +D YAKSG++  +R++F+ +  K +++WN++I GY +HG  + ALDLF +MK   L P+ 
Sbjct: 245 MDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVL-PDH 303

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
            TF+ ++ A S  G+++ GK  F S+   + I P ++HY+ MIDL G  G+LEEA + I 
Sbjct: 304 ITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIM 363

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPED 721
           +M +EPD+ +W ALL +C+IHGN+++  LA+E+L +LEP D     ++  +YA  GK + 
Sbjct: 364 EMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWDG 423

Query: 722 ALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPE--NVTAR 779
             ++R L      + S    WIEV N V+ F++   S   S+ +Y+ L+   +       
Sbjct: 424 VARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMKEAGY 483

Query: 780 SSHSGLC---IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAK 836
           +   G     +E++EK ++   HSE+LA+AF LI S+ A   + I+KN+R+C  CH   K
Sbjct: 484 APQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLI-STSAGTKLLIIKNLRICEDCHVAIK 542

Query: 837 YVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           ++S +   EI + D    HHFK+G CSCGD+W
Sbjct: 543 FISKITEREITIRDVNRYHHFKDGVCSCGDFW 574



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 206/452 (45%), Gaps = 54/452 (11%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           Y +LLQ+C+   +I   ++LHA +  V    +  + TKL+++Y  C  L +A  +F+ + 
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           +RNL+ W+ MI  Y+ +  +   + L++ M   GL PD F FP +L+AC      E GK 
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H  VI+ G+     V  +++ +Y KCG +  AR+ F+ +DE+D V WNSM++ Y Q G+
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNI----------------------------------- 263
            DE+  L   M    +K    TF I                                   
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTA 243

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L+  Y + G  +VA  + + +E       V +W  MI+G+A +G  ++ALDLFKEM    
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEE----KRVVSWNAMITGYAMHGHANEALDLFKEMKG-K 298

Query: 324 VMPNGVTITSAISACTDLKALAMG-MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           V+P+ +T    ++AC+    L  G M   S+         V     +I++   C  LE A
Sbjct: 299 VLPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEA 358

Query: 383 ER-VFDMIKDKDVYSWNSM-----IAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
            + + +M  + D   W ++     I G  + G    A E  ++++  D    VI  N+  
Sbjct: 359 YKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGEL--ALEKLVELEPDDGGNYVILSNM-- 414

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
             Y Q G  D    L   M      K    SW
Sbjct: 415 --YAQAGKWDGVARLRDLMMNKGLKKSIACSW 444



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 180/362 (49%), Gaps = 11/362 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG    AI++   +   G    + T+  +L+AC   +++   +K+H   +    E DVFV
Sbjct: 80  NGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFV 139

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +YAKCGC++ AR+VF+ + ER++  W++M+  YS++ +  E + L  +M  +GL
Sbjct: 140 GAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGL 199

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P +  F   + A  + G    GK +H    + G     +V+ +++ +Y K G +  AR 
Sbjct: 200 KPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARS 259

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            FE ++EK  V+WN+MI+GY   G  +EA  LF +M + ++    +TF  ++ + +  G 
Sbjct: 260 LFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHITFVGVLAACSHGGL 318

Query: 274 CDVA-MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            +   M     +    I P V  +TCMI      GR  +A  L  EM    V P+     
Sbjct: 319 LNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMR---VEPDAGVWG 375

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDMIK 390
           + + +C     + MG       V++   D    GN +I  NMY++  + +   R+ D++ 
Sbjct: 376 ALLHSCKIHGNVEMGELALEKLVELEPDDG---GNYVILSNMYAQAGKWDGVARLRDLMM 432

Query: 391 DK 392
           +K
Sbjct: 433 NK 434



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 5/262 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG+ +E++ +   +A  G K    T++  + A  D+  +   ++LH +      E +  V
Sbjct: 181 NGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKV 240

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           KT L+ +YAK G ++ AR +FE + E+ + +W+AMI  Y+      E ++LF  M +  +
Sbjct: 241 KTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKV 299

Query: 154 FPDDFLFPKILQACGNCGDFEAGKL-MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  +L AC + G    GK+   S++    +    +    ++ +   CG+L  A 
Sbjct: 300 LPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAY 359

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           +    M  E D   W +++      G  +      +K+   E   G   + IL   Y Q 
Sbjct: 360 KLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDG-GNYVILSNMYAQA 418

Query: 272 GQCDVAMEMVKRMESLGITPDV 293
           G+ D    +   M + G+   +
Sbjct: 419 GKWDGVARLRDLMMNKGLKKSI 440


>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
 gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
          Length = 710

 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 209/686 (30%), Positives = 327/686 (47%), Gaps = 107/686 (15%)

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            F D   F K+L  C         + +H  +I+        ++N ++ VY KCG L +AR
Sbjct: 20  FFTDSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYAR 79

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + F+ M E++  ++NS+IS   + G  DE+  LF  M  ++                   
Sbjct: 80  KVFDRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKD------------------- 120

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
           QC                    +W  MI+GFAQ+ R  +ALD F  M     + N  +  
Sbjct: 121 QC--------------------SWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFG 160

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           S +SAC+ LK L +G +IH L  K  ++ DV +G+ LI+ YSKC  +  A RVFD +++K
Sbjct: 161 SGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEK 220

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-------------------- 432
           +V SWN +I  Y Q G   +A E F +M E    P+ +T                     
Sbjct: 221 NVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIH 280

Query: 433 ----------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT----------- 465
                           N L+  Y + G  +EA  +F RM   + V   T           
Sbjct: 281 ARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASV 340

Query: 466 ---------------ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                           SWN+LIAGY Q G+   ALG+FR ++     P   T  ++L A 
Sbjct: 341 KAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNAS 400

Query: 511 AYLVASNKVKEIHGCVLRRSL------ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
           A L      ++ H  V++         E  + V NSLID Y K G++     +F+ M  K
Sbjct: 401 ANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEK 460

Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
           D ++WN++I GY  +G+   AL+LF +M   G KP+  T +  + A S AG+V+ G++ F
Sbjct: 461 DHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRYF 520

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
            S+T+ + ++P+ +HY+ M+DL GR+G LEEA + IE MP +PD+ +W +LL+AC++H N
Sbjct: 521 FSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHRN 580

Query: 685 IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIE 744
           I L     E++F+++P       L+  +Y+  G+  DA+ VRKL R        G  WI+
Sbjct: 581 ITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRGVVKQPGCSWID 640

Query: 745 VKNLVYTFVTGGWSESYSDLLYSWLQ 770
           +++ V+ F+           +YS L+
Sbjct: 641 IQSNVHVFMVKDKRHPQKKEIYSILK 666



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 237/555 (42%), Gaps = 106/555 (19%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFE 115
           + +  LL  C+   S   AR +H  L + T    +VF++ +L+ VY KCG LD AR+VF+
Sbjct: 25  SPFAKLLDLCVKLRSSRDARSVHGRL-IQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFD 83

Query: 116 DMRERNLYT-------------------------------WSAMIGAYSRDQRWREVVEL 144
            M ERN+++                               W++MI  +++  R+ E ++ 
Sbjct: 84  RMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDW 143

Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
           F  M +D    +D+ F   L AC    D + G  +H L+ K   S    + + ++  Y K
Sbjct: 144 FVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSK 203

Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--- 261
           CG +  ARR F+ M+EK+ V+WN +I+ Y Q G   EA   F +M     K   VT    
Sbjct: 204 CGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASV 263

Query: 262 ---------------------------------NILIRSYNQLGQCDVAMEMVKRM---- 284
                                            N L+  Y + G+ + A  +  RM    
Sbjct: 264 VSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRN 323

Query: 285 ---ESLGIT--------------------PDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
              E+  ++                     D+ +W  +I+G+ QNG   +AL LF+ +  
Sbjct: 324 AVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKR 383

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF------TDDVLVGNSLINMYSK 375
             V P   T  + ++A  +L  L +G + HS  VK GF        D+ VGNSLI+MY K
Sbjct: 384 ESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMK 443

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
           C  +E   RVF+ + +KD  SWN+MI GY Q GY  +A ELF KM ES   P+ +T    
Sbjct: 444 CGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGT 503

Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
           +      G  +E    F  M K   +      +  ++    + G    A  +   M    
Sbjct: 504 LCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQ- 562

Query: 496 FYPNCVTILSVLPAC 510
             P+ V   S+L AC
Sbjct: 563 --PDAVVWSSLLSAC 575



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 123/265 (46%), Gaps = 10/265 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-------NLVT 87
           NG   EA+ +   +  +       T+ NLL A  +   + L R+ H+ +           
Sbjct: 368 NGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGE 427

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           E D+FV   L+ +Y KCG +++   VFE+M E++  +W+ MI  Y+++    E +ELF  
Sbjct: 428 EPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQK 487

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M++ G  PD       L AC + G  E G +   S+  + G+  V+     ++ +  + G
Sbjct: 488 MLESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAG 547

Query: 207 KLIWARRFFESMDEK-DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            L  A+   ESM ++ D V W+S++S   ++  N    +   +   E        + +L 
Sbjct: 548 CLEEAKDLIESMPKQPDAVVWSSLLSA-CKVHRNITLGKYVAEKIFEIDPTSSGPYVLLA 606

Query: 266 RSYNQLGQCDVAMEMVKRMESLGIT 290
             Y++LG+   A+ + K M   G+ 
Sbjct: 607 NMYSELGRWGDAVSVRKLMRRRGVV 631


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 184/573 (32%), Positives = 311/573 (54%), Gaps = 39/573 (6%)

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           TS + +C D KAL  G ++H+    +G   +  +   L+++Y+    L  A  +FD I  
Sbjct: 51  TSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPK 110

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG------------- 438
           ++++ WN +I GY   G    A  L+ KM +  + P+  T   ++               
Sbjct: 111 QNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSI 170

Query: 439 ---YIQNGNEDEA------VDLFQRMG--------KNDKVKRNTASWNSLIAGYQQLGQK 481
               I++G E +       +D++ + G         +  V R+   WNS++A Y Q G  
Sbjct: 171 HEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHP 230

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
           + ++ + R+M ++   P   T+++V+ + A +      +EIHG   R   +S+  V  +L
Sbjct: 231 DESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTAL 290

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
           ID YAK G++  +  +F+ +  K +++WN++I GY +HG    ALDLFD+M+    +P+ 
Sbjct: 291 IDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDH 349

Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
            TF+ ++ A S   ++D G+ ++  +   Y I P ++HY+ MIDL G  G+L+EA + I 
Sbjct: 350 ITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIR 409

Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPED 721
           +M ++PDS +W ALL +C+IHGN++LA LA+E+L +LEP D     ++  +YA  GK E 
Sbjct: 410 NMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEG 469

Query: 722 ALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSS 781
             K+R++  +   + +    WIEVKN VY F+ G  S S SD +Y+ L+ + E +   + 
Sbjct: 470 VEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRL-EGLMHEAG 528

Query: 782 HSGLC------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETA 835
           ++         +EE+EK  +   HSE+LA+AF LI +S     + I KN+R+C  CH   
Sbjct: 529 YAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLL-ITKNLRICEDCHVAI 587

Query: 836 KYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           K++S +   EI + D    H FK+G CSCGD+W
Sbjct: 588 KFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 213/451 (47%), Gaps = 52/451 (11%)

Query: 60  YINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           Y +LLQ+CIDS +++  ++LHA F +L    +  + TKL+ +YA    L +AR +F+ + 
Sbjct: 50  YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIP 109

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           ++NL+ W+ +I  Y+ +      + L+  M+  GL PD+F  P +L+AC        G+ 
Sbjct: 110 KQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRS 169

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H  VIK G      V  +++ +Y KCG ++ A R F+ +  +D V WNSM++ Y Q G 
Sbjct: 170 IHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGH 229

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRS------------------------------- 267
            DE+  L  +M    ++    T   +I S                               
Sbjct: 230 PDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTA 289

Query: 268 ----YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
               Y + G   VA+ + +R+        V +W  +I+G+A +G    ALDLF +M    
Sbjct: 290 LIDMYAKCGSVKVALALFERLRE----KRVVSWNAIITGYAMHGLAVGALDLFDKMRKED 345

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVK-MGFTDDVLVGNSLINMYSKCEEL-EA 381
             P+ +T    ++AC+  + L  G  +++L V+  G T  V     +I++   C +L EA
Sbjct: 346 -RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEA 404

Query: 382 AERVFDMIKDKDVYSWNSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
            + + +M    D   W +++     +        A E  I+++  D    VI  N+    
Sbjct: 405 YDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANM---- 460

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
           Y Q+G   E V+  +++  + ++K+N A SW
Sbjct: 461 YAQSGKW-EGVEKLRQVMIDKRIKKNIACSW 490



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 167/364 (45%), Gaps = 34/364 (9%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           +  +LQ+C +      GK +H+    LG++  + +   ++ +Y     L+ AR  F+ + 
Sbjct: 50  YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIP 109

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL-------- 271
           +++   WN +I GY   G +D A  L+ KM    ++    T   ++++ + L        
Sbjct: 110 KQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRS 169

Query: 272 ------------------------GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
                                    +C   M+  +  + + +  D   W  M++ +AQNG
Sbjct: 170 IHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKI-VVRDAVLWNSMLAAYAQNG 228

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
              +++ L +EM+  GV P   T+ + IS+  D+  L  G EIH    + GF  +  V  
Sbjct: 229 HPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKT 288

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           +LI+MY+KC  ++ A  +F+ +++K V SWN++I GY   G    A +LF KM++ D P 
Sbjct: 289 ALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKEDRPD 348

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           + IT+  +++   +    DE   L+  M ++  +      +  +I      GQ + A  +
Sbjct: 349 H-ITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDL 407

Query: 488 FRKM 491
            R M
Sbjct: 408 IRNM 411



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 145/321 (45%), Gaps = 33/321 (10%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           ++F W  +I G+A NG    A+ L+ +M   G+ P+  T+   + AC+ L A+  G  IH
Sbjct: 112 NLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIH 171

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
              +K G+  D+ VG +LI+MY+KC  +  A RVFD I  +D   WNSM+A Y Q G+  
Sbjct: 172 EYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPD 231

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGY-----IQNGNEDEAVDLFQRMGKNDKVK---- 462
           ++  L  +M  + V P   T   +IS       +  G E            NDKVK    
Sbjct: 232 ESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALI 291

Query: 463 ---------------------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
                                +   SWN++I GY   G    AL +F KM+     P+ +
Sbjct: 292 DMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED-RPDHI 350

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           T + VL AC+     ++ + ++  ++R   +  ++     +ID     G +  +  +   
Sbjct: 351 TFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRN 410

Query: 561 MSSK-DIITWNSLICGYVLHG 580
           MS K D   W +L+    +HG
Sbjct: 411 MSVKPDSGVWGALLNSCKIHG 431


>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
          Length = 613

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 193/583 (33%), Positives = 314/583 (53%), Gaps = 28/583 (4%)

Query: 295 TWTCMISGFAQ-NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME--IH 351
           T+ C+++G+A+  GR + A  LF  +      P+ V+  + +  C      A G      
Sbjct: 50  TYNCLLAGYARAPGRLADARHLFDRIP----TPDVVSYNTLL-LCHFASGDADGARRLFA 104

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           S+ V+     DV   N++++  SK   +E A+ VF  +  ++  SWN+M++G+  +G   
Sbjct: 105 SMPVR-----DVASWNTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGFACSGDMS 159

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
            A E F    E +   + + W  ++SGY+  GN  +A+  F+ M       RN  SWN++
Sbjct: 160 TAEEWFRNAPEKE---DAVLWTAMVSGYMDIGNVVKAIKYFEAMPV-----RNLVSWNAV 211

Query: 472 IAGYQQLGQKNNALGVFRKM-QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +AGY +    ++AL +FR M + +   PN  T+ SVL  C+ L A    K+IH   ++  
Sbjct: 212 VAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLL 271

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
           L  +L V  SL+  Y K G++  +  +F  M ++D++ WN++I GY  HG    A++LF+
Sbjct: 272 LSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFE 331

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           +MK  G++PN  TF+ ++ A    G+ D G + F  + E Y I P ++HYS M+DL  R+
Sbjct: 332 RMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRA 391

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           GKLE A++FI  MP EP  S +  LL ACR++ N++ A LA  +L + +P        + 
Sbjct: 392 GKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAGAYVQLA 451

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ 770
            IYA+  + +D  +VR+  ++NT   + G  WIE+K +++ F +         L++  L 
Sbjct: 452 NIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYLIHEKLG 511

Query: 771 NVPENVTARSSHSGL-----CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNI 825
            + E +        L      ++E  K ++   HSEKLA+AF LI ++    T+RI KN+
Sbjct: 512 QLAERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHG-MTLRIFKNL 570

Query: 826 RMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           R+C  CH  AK +SM+   EI L D+   HHF+ G CSC DYW
Sbjct: 571 RVCGDCHNAAKVISMIEDREIILRDTTRFHHFRGGHCSCDDYW 613



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 208/432 (48%), Gaps = 22/432 (5%)

Query: 82  FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQ-RWRE 140
           FL +       + T  ++   + G L  A E F     +   T++ ++  Y+R   R  +
Sbjct: 8   FLAIARSRARSLSTAAVAAAVRHGDLAGAEEAFVSTPRKTTATYNCLLAGYARAPGRLAD 67

Query: 141 VVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE-AGKLMHSLVIKLGMSCVRRVRNSVL 199
              LF  +      PD   +  +L      GD + A +L  S+ ++   S      N+++
Sbjct: 68  ARHLFDRIPT----PDVVSYNTLLLCHFASGDADGARRLFASMPVRDVASW-----NTMV 118

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
           +   K G +  A+  F +M  ++ V+WN+M+SG+   G+   A   F     +E     V
Sbjct: 119 SGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGFACSGDMSTAEEWFRNAPEKE---DAV 175

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
            +  ++  Y  +G     ++ +K  E++ +  ++ +W  +++G+ +N     AL LF+ M
Sbjct: 176 LWTAMVSGYMDIGN---VVKAIKYFEAMPVR-NLVSWNAVVAGYVKNSHADDALRLFRTM 231

Query: 320 -SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
                V PN  T++S +  C++L AL  G +IH   +K+  + ++ VG SL++MY KC +
Sbjct: 232 VREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGD 291

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           L +A  +F  +  +DV +WN+MI+GY Q G   +A  LF +M++  V PN IT+ V+++ 
Sbjct: 292 LSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTA 351

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
            I  G  D  +  F+ M +   ++     ++ ++    + G+   A+   R M    F P
Sbjct: 352 CIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSMP---FEP 408

Query: 499 NCVTILSVLPAC 510
           +     ++L AC
Sbjct: 409 HPSAYGTLLAAC 420



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 157/326 (48%), Gaps = 17/326 (5%)

Query: 82  FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           F N   + D  + T ++S Y   G +  A + FE M  RNL +W+A++  Y ++    + 
Sbjct: 165 FRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDA 224

Query: 142 VELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
           + LF  MV++  + P+      +L  C N      GK +H   +KL +S    V  S+++
Sbjct: 225 LRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVS 284

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y KCG L  A   F  M  +D VAWN+MISGY Q G+  EA  LF++M  E ++   +T
Sbjct: 285 MYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWIT 344

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           F +++ +    G CD  ++  + M+ L GI P V  ++CM+    + G+  +A+D  + M
Sbjct: 345 FVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSM 404

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS---LINMYSKC 376
            F    P+     + ++AC   K L    E   LA       D     +   L N+Y+  
Sbjct: 405 PF---EPHPSAYGTLLAACRVYKNL----EFAELAAGKLIEKDPQSAGAYVQLANIYAVA 457

Query: 377 EELEAAERVFDMIKDKDV-----YSW 397
            + +   RV   +KD  V     YSW
Sbjct: 458 NQWDDVSRVRRWMKDNTVVKTPGYSW 483



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 134/339 (39%), Gaps = 85/339 (25%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
           GRL +A  + D I T        +Y  LL     S     AR+L A + +    DV    
Sbjct: 63  GRLADARHLFDRIPTPDVV----SYNTLLLCHFASGDADGARRLFASMPVR---DVASWN 115

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            ++S  +K G +++A+ VF  M  RN  +W+AM+  ++         E F          
Sbjct: 116 TMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGFACSGDMSTAEEWF---------- 165

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
                        N  + E   L  ++V                + Y+  G ++ A ++F
Sbjct: 166 ------------RNAPEKEDAVLWTAMV----------------SGYMDIGNVVKAIKYF 197

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE-----------EIKLGVVTFNI- 263
           E+M  ++ V+WN++++GY +    D+A RLF  M RE            + LG    +  
Sbjct: 198 EAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSAL 257

Query: 264 ------------------------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                                   L+  Y + G    A  +   M     T DV  W  M
Sbjct: 258 GFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMH----TRDVVAWNAM 313

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
           ISG+AQ+G   +A++LF+ M   GV PN +T    ++AC
Sbjct: 314 ISGYAQHGDGKEAINLFERMKDEGVEPNWITFVVVLTAC 352


>gi|326519957|dbj|BAK03903.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 598

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 189/581 (32%), Positives = 297/581 (51%), Gaps = 50/581 (8%)

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA----MGMEIHSL 353
            +I   A +GR   AL L+  +   G+ P   T+ S + +     A+     + + +H+ 
Sbjct: 58  ALIRAHASSGRPQAALPLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHAH 117

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
           AV++G    +LV N+LI ++                                 AG  G+ 
Sbjct: 118 AVRLGLAGFLLVNNALIRVH---------------------------------AGLLGRL 144

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            +  + ++ S    +  T+N LI+ + + G   +A  LF  M      +RN  SW++++ 
Sbjct: 145 ADAHLLLRTS-AAVDASTFNTLITAHARAGRVADARSLFDEM-----PERNAVSWSAMVN 198

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
           GY Q G    ALGVF +MQ+    P+   ++ VL ACA L A  + K +HG +   ++  
Sbjct: 199 GYVQAGDGREALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRM 258

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
           ++ +  +L+D YAK G +     +F+GM  K+++ W ++I G  +HG    +L LF QM+
Sbjct: 259 TVFLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQME 318

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
           S G+KP+   F+  + A +  G+VD G+++F S+   Y I P IEHY  M+DL  R+G L
Sbjct: 319 SSGVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLL 378

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIY 713
            EA + +E MP++PD+ IW AL+  CR H N++LA   I+   +LEP       L+  IY
Sbjct: 379 SEARDMVEKMPMKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLGNIY 438

Query: 714 AICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES-YSDLLYSWLQ-- 770
           +  G+   A ++R L RE     + G   +E+K +++ F+ G  S     D+L  W +  
Sbjct: 439 SASGRHASAREIRNLMREKGVEKTPGCSNVEIKGVIHQFIVGDLSHPRIKDILTKWYEID 498

Query: 771 ---NVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRM 827
               + E          L IEEEE E     HSEKLA+AFALI S++    IRIVKN+R+
Sbjct: 499 SRIRLEEGYVPDKKEVLLDIEEEEMESALSRHSEKLAIAFALI-STEDYMPIRIVKNLRV 557

Query: 828 CVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           C  CH   K +S ++  EI + D    H FK+G CSC DYW
Sbjct: 558 CQDCHHVTKLISKVYGREIIVRDRTRFHLFKDGTCSCKDYW 598



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/492 (21%), Positives = 207/492 (42%), Gaps = 62/492 (12%)

Query: 91  VFVKTKLLSVYAKCGCLDDARE--------VFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
           + V  + + + ++C    DAR         V   +  R+     A+I A++   R +  +
Sbjct: 14  MVVVRRYVELLSRCSGGADARPIARIQAALVTSGLLRRSAELHDALIRAHASSGRPQAAL 73

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM----HSLVIKLGMSCVRRVRNSV 198
            L+  +++ GLFP     P +L++          + +    H+  ++LG++    V N++
Sbjct: 74  PLYAHLIRAGLFPTPHTLPSLLKSLALSPAVPGARRLALAVHAHAVRLGLAGFLLVNNAL 133

Query: 199 LAVYVKC-GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           + V+    G+L  A     +    D   +N++I+ + + G   +A  LFD          
Sbjct: 134 IRVHAGLLGRLADAHLLLRTSAAVDASTFNTLITAHARAGRVADARSLFD---------- 183

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
                                EM +R        +  +W+ M++G+ Q G   +AL +F 
Sbjct: 184 ---------------------EMPER--------NAVSWSAMVNGYVQAGDGREALGVFS 214

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
           +M   GV P+   +   ++AC  L AL  G  +H           V +G +L++MY+KC 
Sbjct: 215 QMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALVDMYAKCG 274

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
           E++    VF+ +KDK+V +W +MI G    G    +  LF +M+ S V P+ I +   + 
Sbjct: 275 EVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDIAFIGALC 334

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
                G  D+  +LF  M  N  +K     +  ++    + G  + A  +  KM      
Sbjct: 335 ACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEKMP---MK 391

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI---DTYAKSGNIVYS 554
           P+ +   +++  C +    +K  E+   V++  +E       + +   + Y+ SG    +
Sbjct: 392 PDALIWGALMAGCRF----HKNVELAEYVIKHWIELEPDKSGAYVLLGNIYSASGRHASA 447

Query: 555 RTIFDGMSSKDI 566
           R I + M  K +
Sbjct: 448 REIRNLMREKGV 459



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 151/319 (47%), Gaps = 11/319 (3%)

Query: 80  HAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
           H  L     +D      L++ +A+ G + DAR +F++M ERN  +WSAM+  Y +    R
Sbjct: 148 HLLLRTSAAVDASTFNTLITAHARAGRVADARSLFDEMPERNAVSWSAMVNGYVQAGDGR 207

Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
           E + +F  M   G+ PDD +   +L AC   G  E GK +H  +    +     +  +++
Sbjct: 208 EALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTVFLGTALV 267

Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +Y KCG++      FE M +K+ +AW +MI G    G   ++  LF +M    +K   +
Sbjct: 268 DMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESSGVKPDDI 327

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
            F   + +    G  D   E+   M  + GI P +  + CM+   A+NG  S+A D+ ++
Sbjct: 328 AFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSEARDMVEK 387

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD---VLVGNSLINMYSK 375
           M    + P+ +   + ++ C   K + +   +    +++        VL+G    N+YS 
Sbjct: 388 MP---MKPDALIWGALMAGCRFHKNVELAEYVIKHWIELEPDKSGAYVLLG----NIYSA 440

Query: 376 CEELEAAERVFDMIKDKDV 394
                +A  + +++++K V
Sbjct: 441 SGRHASAREIRNLMREKGV 459



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 5/203 (2%)

Query: 33  CGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDV 91
            G+GR  EA+ V   +  QG +      + +L AC    ++   + +H +L      + V
Sbjct: 203 AGDGR--EALGVFSQMQAQGVRPDDTVLVGVLAACAQLGALEQGKWVHGYLKANNIRMTV 260

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           F+ T L+ +YAKCG +    EVFE M+++N+  W+ MI   +   R  + + LF  M   
Sbjct: 261 FLGTALVDMYAKCGEVQLGMEVFEGMKDKNVLAWTTMIKGLAMHGRGSDSLTLFSQMESS 320

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           G+ PDD  F   L AC + G  + G+ L +S+V   G+         ++ +  + G L  
Sbjct: 321 GVKPDDIAFIGALCACTHTGLVDKGRELFNSMVNNYGIKPKIEHYGCMVDLLARNGLLSE 380

Query: 211 ARRFFESMDEK-DGVAWNSMISG 232
           AR   E M  K D + W ++++G
Sbjct: 381 ARDMVEKMPMKPDALIWGALMAG 403


>gi|356541211|ref|XP_003539074.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g59600-like [Glycine max]
          Length = 548

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 195/540 (36%), Positives = 290/540 (53%), Gaps = 24/540 (4%)

Query: 224 VAWNSMISGYFQIGENDEAHRLFDKMCREE------------IKLGVVTFNI----LIRS 267
           +A N +IS +F   E +    L D   R+             +  G   FN+    L+  
Sbjct: 12  LATNGIISRHFFRSEPESYAELIDMYARDRALHAGKKLHAHLVTNGFARFNVVASNLVSF 71

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV-GVMP 326
           Y   GQ   A ++  ++     T +V  W  +I   A+ G    AL +F EM  V G+ P
Sbjct: 72  YTCCGQLSHARKLFDKIP----TTNVRRWIALIGSCARCGFYDHALAVFSEMQAVQGLTP 127

Query: 327 NGV-TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           N V  I S + AC  +     G +IH   +K  F  D  V +SLI MYSKC ++E A +V
Sbjct: 128 NYVFVIPSVLKACGHVGDRITGEKIHGFILKCSFELDSFVSSSLIVMYSKCAKVEDARKV 187

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
           FD +  KD  + N+++AGY Q G   +A  L   M+   + PNV+TWN LISG+ Q G++
Sbjct: 188 FDGMTVKDTVALNAVVAGYVQQGAANEALGLVESMKLMGLKPNVVTWNSLISGFSQKGDQ 247

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
               ++F R+   D V+ +  SW S+I+G+ Q  +   A   F++M S  F+P   TI +
Sbjct: 248 GRVSEIF-RLMIADGVEPDVVSWTSVISGFVQNFRNKEAFDTFKQMLSHGFHPTSATISA 306

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           +LPACA     +  +EIHG  L   +E  + V ++L+D YAK G I  +R +F  M  K+
Sbjct: 307 LLPACATAARVSVGREIHGYALVTGVEGDIYVRSALVDMYAKCGFISEARNLFSRMPEKN 366

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGL-KPNRGTFLSIILAHSLAGMVDLGKKVF 624
            +TWNS+I G+  HG+   A++LF+QM+  G+ K +  TF + + A S  G  +LG+++F
Sbjct: 367 TVTWNSIIFGFANHGYCEEAIELFNQMEKEGVAKLDHLTFTAALTACSHVGDFELGQRLF 426

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
             + E Y I P +EHY+ M+DL GR+GKL EA   I+ MPIEPD  +W ALL ACR H +
Sbjct: 427 KIMQEKYSIEPRLEHYACMVDLLGRAGKLHEAYCMIKTMPIEPDLFVWGALLAACRNHRH 486

Query: 685 IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIE 744
           ++LA +A   L +LEP       L+  +YA  GK     +V+K  ++   R   G  WIE
Sbjct: 487 VELAEVAAMHLMELEPESAANPLLLSSVYADAGKWGKFERVKKRIKKGKLRKLQGLSWIE 546



 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 242/457 (52%), Gaps = 9/457 (1%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           +Y  L+       ++H  +KLHA L  N     +V V + L+S Y  CG L  AR++F+ 
Sbjct: 29  SYAELIDMYARDRALHAGKKLHAHLVTNGFARFNV-VASNLVSFYTCCGQLSHARKLFDK 87

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLM-VQDGLFPDD-FLFPKILQACGNCGDFE 174
           +   N+  W A+IG+ +R   +   + +F  M    GL P+  F+ P +L+ACG+ GD  
Sbjct: 88  IPTTNVRRWIALIGSCARCGFYDHALAVFSEMQAVQGLTPNYVFVIPSVLKACGHVGDRI 147

Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
            G+ +H  ++K        V +S++ +Y KC K+  AR+ F+ M  KD VA N++++GY 
Sbjct: 148 TGEKIHGFILKCSFELDSFVSSSLIVMYSKCAKVEDARKVFDGMTVKDTVALNAVVAGYV 207

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
           Q G  +EA  L + M    +K  VVT+N LI  ++Q G      E+ + M + G+ PDV 
Sbjct: 208 QQGAANEALGLVESMKLMGLKPNVVTWNSLISGFSQKGDQGRVSEIFRLMIADGVEPDVV 267

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +WT +ISGF QN R  +A D FK+M   G  P   TI++ + AC     +++G EIH  A
Sbjct: 268 SWTSVISGFVQNFRNKEAFDTFKQMLSHGFHPTSATISALLPACATAARVSVGREIHGYA 327

Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           +  G   D+ V ++L++MY+KC  +  A  +F  + +K+  +WNS+I G+   GYC +A 
Sbjct: 328 LVTGVEGDIYVRSALVDMYAKCGFISEARNLFSRMPEKNTVTWNSIIFGFANHGYCEEAI 387

Query: 415 ELFIKMQESDVPP-NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
           ELF +M++  V   + +T+   ++     G+ +    LF+ M +   ++     +  ++ 
Sbjct: 388 ELFNQMEKEGVAKLDHLTFTAALTACSHVGDFELGQRLFKIMQEKYSIEPRLEHYACMVD 447

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
              + G+ + A  + + M      P+     ++L AC
Sbjct: 448 LLGRAGKLHEAYCMIKTMP---IEPDLFVWGALLAAC 481



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 8/204 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT--EIDVF 92
           N R  EA      + + G      T   LL AC  +  + + R++H +  LVT  E D++
Sbjct: 279 NFRNKEAFDTFKQMLSHGFHPTSATISALLPACATAARVSVGREIHGY-ALVTGVEGDIY 337

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V++ L+ +YAKCG + +AR +F  M E+N  TW+++I  ++      E +ELF  M ++G
Sbjct: 338 VRSALVDMYAKCGFISEARNLFSRMPEKNTVTWNSIIFGFANHGYCEEAIELFNQMEKEG 397

Query: 153 LFPDDFL-FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV--KCGKLI 209
           +   D L F   L AC + GDFE G+ +   +++   S   R+ +    V +  + GKL 
Sbjct: 398 VAKLDHLTFTAALTACSHVGDFELGQRLFK-IMQEKYSIEPRLEHYACMVDLLGRAGKLH 456

Query: 210 WARRFFESMD-EKDGVAWNSMISG 232
            A    ++M  E D   W ++++ 
Sbjct: 457 EAYCMIKTMPIEPDLFVWGALLAA 480


>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
          Length = 803

 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 212/746 (28%), Positives = 343/746 (45%), Gaps = 108/746 (14%)

Query: 79  LHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQ-R 137
           L AF  L +  D +     LS   + G LD AR++   M  RN  +W+ +I A +R    
Sbjct: 63  LLAFRALPSPND-YSYNAALSAACRAGDLDAARDLLGGMPRRNAVSWNTVISALARSPGD 121

Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
             E VE++  M  +GL P  F    +L ACG       G+  H + +K+G+   + V N+
Sbjct: 122 GGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENA 181

Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
           +L +Y KCG +  A R F  M   + V++ +M+ G  Q G  D+A RLF +MCR  + + 
Sbjct: 182 LLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVPVD 241

Query: 258 VVTFNILIRSYNQ-------------LGQCDVAM-------------------------- 278
            V+ + ++ +  Q             LGQ   A+                          
Sbjct: 242 PVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVEM 301

Query: 279 -EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
            E VK  ESL  +  + +W  +I+GF Q G  ++A+++   M   G  PN VT ++ +++
Sbjct: 302 DEAVKVFESL-PSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLAS 360

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C                                    K  ++ +A  +FD I    V +W
Sbjct: 361 CI-----------------------------------KARDVHSARAMFDKISRPSVTTW 385

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-----GYIQNGNEDEA---- 448
           N++++GYCQ        ELF +MQ  +V P+  T  V++S     G +  G +  +    
Sbjct: 386 NTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVR 445

Query: 449 -------------VDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
                        VD++ + G+        N   +R+   WNS+I+G         A   
Sbjct: 446 FLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIISGLTIHSLNKEAFDF 505

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           F++M+ +   P   +  S++ +C+ L +    ++IH  V++   + ++ V ++LID YAK
Sbjct: 506 FKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQNVYVGSALIDMYAK 565

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            GN+  +R  FD M  K+I+ WN +I GY  +G    A++LF+ M +   KP+  TF+++
Sbjct: 566 CGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYMLTTEQKPDAVTFIAV 625

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           +   S +G+VD     F S+   Y IIP+ EHY+ +ID  GR+G+  E    I  MP + 
Sbjct: 626 LTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKD 685

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           D  IWE LL AC +H N +L   A E LF ++P +     L+  IYA  G+  DA  VR 
Sbjct: 686 DPIIWEVLLAACVVHHNAELGKCAAEHLFRIDPKNPSPYVLLSNIYASLGRHGDASAVRA 745

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFV 753
           L          G  WI+ K+ V  F+
Sbjct: 746 LMSNRGVVKGRGYSWIDQKDGVRAFM 771



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 152/590 (25%), Positives = 275/590 (46%), Gaps = 55/590 (9%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVK 94
           G   EA+ +   +  +G      T  ++L AC    ++   R+ H   + +  + + FV+
Sbjct: 120 GDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVE 179

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
             LL +Y KCG + DA  +F  M   N  +++AM+G  ++     + + LF  M + G+ 
Sbjct: 180 NALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGVP 239

Query: 155 PDDFLFPKILQACGN-CGD-------FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
            D      +L AC   C         F  G+ +H+LV++ G    + V NS++ +Y KC 
Sbjct: 240 VDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCV 299

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           ++  A + FES+     V+WN +I+G+ Q G   +A  +   M     +   VT++ L+ 
Sbjct: 300 EMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFEPNEVTYSNLLA 359

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
           S  +      A  M  ++      P V TW  ++SG+ Q  +    ++LF+ M    V P
Sbjct: 360 SCIKARDVHSARAMFDKIS----RPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQP 415

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           +  T+   +S+C+ L  L  G ++HS +V+    +D+ V + L++MYSKC ++  A  +F
Sbjct: 416 DRTTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIF 475

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS--------- 437
           + + ++DV  WNS+I+G        +A++ F +M+E+ + P   ++  +I+         
Sbjct: 476 NKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIP 535

Query: 438 ------------GYIQNGNEDEA-VDLFQRMGKNDKVK--------RNTASWNSLIAGYQ 476
                       GY QN     A +D++ + G  D  +        +N  +WN +I GY 
Sbjct: 536 HGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYA 595

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           Q G  + A+ +F  M ++   P+ VT ++VL  C++    +K           S+E+S  
Sbjct: 596 QNGLGDKAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFF-----NSMENSYG 650

Query: 537 VM------NSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLH 579
           ++        LID   ++G  V    +   M  K D I W  L+   V+H
Sbjct: 651 IIPLAEHYTCLIDALGRAGRFVEVEALIHKMPCKDDPIIWEVLLAACVVH 700



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 206/464 (44%), Gaps = 75/464 (16%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDS--------NSIHLARKLHAFL 83
           L   G +++A+ +   +   G  V   +  ++L AC  +         +  L + +HA +
Sbjct: 217 LAQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALV 276

Query: 84  -NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
                  D  V   L+ +Y KC  +D+A +VFE +    + +W+ +I  + ++    + V
Sbjct: 277 VRKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAV 336

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
           E+  LM + G  P++  +  +L +C                                   
Sbjct: 337 EVLSLMQEAGFEPNEVTYSNLLASC----------------------------------- 361

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
           +K   +  AR  F+ +       WN+++SGY Q  ++ +   LF +M  + ++    T  
Sbjct: 362 IKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLA 421

Query: 263 ILIRSYNQLGQCDVA----------------------MEMVKRMESLGITPDVFT----- 295
           +++ S ++LG  D                        ++M  +   +GI   +F      
Sbjct: 422 VILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTER 481

Query: 296 ----WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
               W  +ISG   +    +A D FK+M   G+MP   +  S I++C+ L ++  G +IH
Sbjct: 482 DVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIH 541

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           +  +K G+  +V VG++LI+MY+KC  ++ A   FD +  K++ +WN MI GY Q G   
Sbjct: 542 AQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGD 601

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           KA ELF  M  ++  P+ +T+  +++G   +G  D+A+  F  M
Sbjct: 602 KAVELFEYMLTTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSM 645



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 151/310 (48%), Gaps = 4/310 (1%)

Query: 14  SLLTKKSNPRFR--DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSN 71
           ++  K S P     +T L   C   +  + I +   +  Q  +  R T   +L +C    
Sbjct: 372 AMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLG 431

Query: 72  SIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIG 130
            +   R++H A +  +   D+FV + L+ +Y+KCG +  AR +F  M ER++  W+++I 
Sbjct: 432 ILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNKMTERDVVCWNSIIS 491

Query: 131 AYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSC 190
             +     +E  + F  M ++G+ P +  +  ++ +C        G+ +H+ V+K G   
Sbjct: 492 GLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSSIPHGRQIHAQVMKDGYDQ 551

Query: 191 VRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC 250
              V ++++ +Y KCG +  AR FF++M  K+ VAWN MI GY Q G  D+A  LF+ M 
Sbjct: 552 NVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHGYAQNGLGDKAVELFEYML 611

Query: 251 REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRT 309
             E K   VTF  ++   +  G  D AM     ME S GI P    +TC+I    + GR 
Sbjct: 612 TTEQKPDAVTFIAVLTGCSHSGLVDKAMAFFNSMENSYGIIPLAEHYTCLIDALGRAGRF 671

Query: 310 SQALDLFKEM 319
            +   L  +M
Sbjct: 672 VEVEALIHKM 681



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 99/436 (22%), Positives = 178/436 (40%), Gaps = 89/436 (20%)

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           D  + N L+ +YS+      A   F  +   + YS+N+ ++  C+AG    A +L   M 
Sbjct: 42  DTFLANRLVELYSRAGLPRHALLAFRALPSPNDYSYNAALSAACRAGDLDAARDLLGGMP 101

Query: 422 ESDVPPNVITWNVLISGYIQN-GNEDEAVDLFQRMGKNDKVKRN--TASWNSLIAGYQQL 478
                 N ++WN +IS   ++ G+  EAV+++ RM     +  +   AS  S   G   L
Sbjct: 102 RR----NAVSWNTVISALARSPGDGGEAVEMYGRMRAEGLLPTHFTLASVLSACGGLAAL 157

Query: 479 GQ-------------------KNNALGVFRKMQS-----SCFY----PNCV--------- 501
           G                    +N  LG++ K  S       FY    PN V         
Sbjct: 158 GDGRRCHGVAVKVGLDANQFVENALLGMYTKCGSVGDAVRLFYGMARPNEVSFTAMMGGL 217

Query: 502 --------------------------TILSVLPACAYLVASNKV--------KEIHGCVL 527
                                     ++ SVL ACA   A++          + IH  V+
Sbjct: 218 AQTGSIDDALRLFARMCRSGVPVDPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVV 277

Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
           R+   S   V NSLID Y K   +  +  +F+ + S  I++WN LI G+   G    A++
Sbjct: 278 RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVE 337

Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
           +   M+  G +PN  T+ +++ +   A  V   + +F  I+      P +  ++ ++  Y
Sbjct: 338 VLSLMQEAGFEPNEVTYSNLLASCIKARDVHSARAMFDKISR-----PSVTTWNTLLSGY 392

Query: 648 GRSGKLEEAMEFIEDMP---IEPDSSIWEALLTACRIHGNIDLA--VLAIERLFDLEPGD 702
            +  + ++ +E    M    ++PD +    +L++C   G +D    V +    F L   D
Sbjct: 393 CQEEQHQDTIELFRRMQHQNVQPDRTTLAVILSSCSKLGILDFGRQVHSASVRFLLH-ND 451

Query: 703 VLIQRLILQIYAICGK 718
           + +   ++ +Y+ CG+
Sbjct: 452 MFVASGLVDMYSKCGQ 467


>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 220/749 (29%), Positives = 373/749 (49%), Gaps = 58/749 (7%)

Query: 57  RNTYI-NLLQACIDSNSIHLARKL-HA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREV 113
           + TY+ +LLQ CID  + HLA KL HA  L      D F+  +L+  YAKC  +D +R +
Sbjct: 4   KTTYLASLLQTCIDKKA-HLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRL 62

Query: 114 FEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQ--ACGNCG 171
           F+ M +R++YTW+A++GAY +     +   LF  M +  +   + L   + +  ACG   
Sbjct: 63  FDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALV 122

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
           D E G+  H + IK+G+     V N++L +Y KC  +  A + F  + E + V++ +M+ 
Sbjct: 123 DVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMG 182

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI-------------RSYNQLGQCDVAM 278
           G     + +EA RLF  M R  I +  V+ + ++                N +   DV  
Sbjct: 183 GLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHG 242

Query: 279 EMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
           + V  +    G   D+     ++  +A+NG    A  +F  M  V V+   V I      
Sbjct: 243 QQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQK 302

Query: 338 CTDLKALA--MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
               KA+     M+ H      GF  D +   +++    K  ++EA  ++FD +    + 
Sbjct: 303 SQSSKAIEYLQRMQYH------GFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSLS 356

Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY-----IQNGNEDEAVD 450
           SWN++++GY Q     +A +LF +MQ   V P+  T  +++S       ++ G +  AV 
Sbjct: 357 SWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVS 416

Query: 451 -----------------LFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNAL 485
                            ++ + GK +  KR        +   WNS++AG         A 
Sbjct: 417 QKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAF 476

Query: 486 GVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
             F+KM+    +P+  +  +VL  CA L + ++ +++H  + R    +   V ++LID Y
Sbjct: 477 TFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMY 536

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL 605
           +K G++  +R +FD M  K+ +TWN +I GY  +G    A+ L++ M   G KP+  TF+
Sbjct: 537 SKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFV 596

Query: 606 SIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
           +++ A S +G+VD G K+F S+ + + + P+++HY+ +ID  GR+G+L EA   I+ MP 
Sbjct: 597 AVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPC 656

Query: 666 EPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
           + D  IWE LL++CR++ ++ LA  A E LF L+P +     L+  IY+  G+ +DA  V
Sbjct: 657 KYDPIIWEVLLSSCRVYADVSLARRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAV 716

Query: 726 RKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           R+L   N      G  WIE KN +  F+ 
Sbjct: 717 RELMSYNQVVKDPGYSWIEHKNGMQAFMV 745



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 149/689 (21%), Positives = 271/689 (39%), Gaps = 172/689 (24%)

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           GKLI A      + + D    N +I  Y +    D + RLFD+M + +I     T+N ++
Sbjct: 24  GKLIHAHMLRSRLSD-DTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDI----YTWNAIL 78

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
            +Y +  + + A  +   M       ++ +W  +IS   +NG                  
Sbjct: 79  GAYCKASELEDAHVLFAEMPE----RNIVSWNTLISALTRNG------------------ 116

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
                      AC  L  +  G   H +++K+G  +++ VGN+L+ MY+KC  +  A + 
Sbjct: 117 -----------ACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQA 165

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------- 432
           F  + + +  S+ +M+ G   +    +A+ LF  M  + +  + ++              
Sbjct: 166 FGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCG 225

Query: 433 ------------------------------------NVLISGYIQNGNEDEAVDLFQRMG 456
                                               N L+  Y +NGN D A  +F  M 
Sbjct: 226 EFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMP 285

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
           +   V     SWN +IAGY Q  Q + A+   ++MQ   F P+ +T +++L AC      
Sbjct: 286 EVSVV-----SWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACI----- 335

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
                                         KSG+I   R +FDGMSS  + +WN+++ GY
Sbjct: 336 ------------------------------KSGDIEAGRQMFDGMSSPSLSSWNTILSGY 365

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL-GKKVFCSITECYQIIP 635
             +     A+ LF +M+   + P+R T L+IIL+ SLAGM+ L G +   ++++      
Sbjct: 366 SQNENHKEAVKLFREMQFRSVHPDR-TTLAIILS-SLAGMMLLEGGRQVHAVSQKAVFRT 423

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
            I   S +I +Y + GK+E A + I D   E D   W +++    ++     A    +++
Sbjct: 424 DIYLASGLIGMYSKCGKVEMA-KRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKM 482

Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR-------------NSFGQCW 742
              E G    Q     + + C K     + R++  +  R              + + +C 
Sbjct: 483 --REKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCG 540

Query: 743 -IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSE 801
            ++    V+  + G  + +++++++ + QN                         G   E
Sbjct: 541 DVDAARWVFDMMLGKNTVTWNEMIHGYAQN-------------------------GCGDE 575

Query: 802 KLALAFALIGSSQAPHTIRIVKNIRMCVH 830
            + L   +IGS + P  I  V  +  C H
Sbjct: 576 AVLLYEDMIGSGEKPDGITFVAVLTACSH 604



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 113/486 (23%), Positives = 193/486 (39%), Gaps = 82/486 (16%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLL 98
           ++AI  L  +   G +    TY+N+L ACI                              
Sbjct: 306 SKAIEYLQRMQYHGFEPDEITYVNMLVACI------------------------------ 335

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
               K G ++  R++F+ M   +L +W+ ++  YS+++  +E V+LF  M    + PD  
Sbjct: 336 ----KSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRT 391

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
               IL +       E G+ +H++  K        + + ++ +Y KCGK+  A+R F+ +
Sbjct: 392 TLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRI 451

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKM----------------------------- 249
            E D V WNSM++G      + EA   F KM                             
Sbjct: 452 AELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGR 511

Query: 250 ------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
                  RE         + LI  Y++ G  D A  +   M    +  +  TW  MI G+
Sbjct: 512 QVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMM----LGKNTVTWNEMIHGY 567

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDD 362
           AQNG   +A+ L+++M   G  P+G+T  + ++AC+    +  G++I +S+  + G    
Sbjct: 568 AQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPL 627

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIAG---YCQAGYCGKAYELFI 418
           V     +I+   +   L  AE + D +  K D   W  +++    Y       +A E   
Sbjct: 628 VDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELF 687

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
            +   +  P V+  N+    Y   G  D+A  + + M  N  VK    SW     G Q  
Sbjct: 688 HLDPQNSAPYVLLANI----YSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNGMQAF 743

Query: 479 GQKNNA 484
              +N 
Sbjct: 744 MVDDNG 749


>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
          Length = 616

 Score =  319 bits (817), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 195/586 (33%), Positives = 301/586 (51%), Gaps = 50/586 (8%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           PD F W  MI G + + +  ++L L+  M       N  T    + AC++L A     +I
Sbjct: 73  PDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSAFQETTQI 132

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H+   K G+                                 D+Y+ NS+I  Y   G  
Sbjct: 133 HAHITKFGY-------------------------------GHDIYAVNSLINSYAVTGNF 161

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
             A+ LF ++QE    P+ ++WN +I GY++ G  D A+ LF++M +    K N  SW +
Sbjct: 162 KHAHLLFDRIQE----PDAVSWNSVIKGYVKAGEMDMALTLFRKMPE----KNNAISWTT 213

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV--LR 528
           +I+GY Q G    AL +F +MQ+S   P+ V++ S L AC+ L A  + K IH      R
Sbjct: 214 MISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTR 273

Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
             ++S L  +  LID YAK G +  +  +F  M +K +  W +LI GY  HG    A+  
Sbjct: 274 TRIDSVLCCV--LIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGREAISK 331

Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
           F +M++ G+KPN  TF +++ A S  G+V+ GK VF +I   Y + P IEHY  M+DL G
Sbjct: 332 FLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLG 391

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           R+G L EA  FI+ MP++P++ IW +LL AC+IH NI+L     E L +++         
Sbjct: 392 RAGLLNEANRFIQKMPLKPNAVIWGSLLKACQIHKNIELGEKIGEILIEMDSNHGGRYVH 451

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES-YSDLLYS 767
           +  I+A+  K + A + R+L RE       G   I ++   + F+ G  S +   ++   
Sbjct: 452 MANIHAMGKKWDKAAETRRLMREQGVVKVPGCSAISLEGTTHEFLAGDRSHAEIQEIRTK 511

Query: 768 W---LQNVPENVTARSSHSGL--CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
           W    + + EN         L   +++EEKE I   HSEKLA+ + L+ +     TIRI+
Sbjct: 512 WRFVRRKLEENGYVPELEDMLLDLVDDEEKEAIVHQHSEKLAITYGLMKTKPGT-TIRIM 570

Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           KN+R+C  CH+    +S ++  +I + D    HHFK+G+CSCGDYW
Sbjct: 571 KNLRVCKDCHKVMNLISKIYKRDIVMRDRTRFHHFKDGKCSCGDYW 616



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 190/403 (47%), Gaps = 44/403 (10%)

Query: 110 AREVFEDMRER-NLYTWSAMI-GAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC 167
           A +VF +  +R + + W+ MI G    DQ  R ++ L+  M+      + + FP +L+AC
Sbjct: 62  AHDVFFNGFDRPDTFLWNLMIRGLSCSDQPDRSLL-LYHRMLCCSAPHNAYTFPFLLKAC 120

Query: 168 GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
            N   F+    +H+ + K G                                  D  A N
Sbjct: 121 SNLSAFQETTQIHAHITKFGYG-------------------------------HDIYAVN 149

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
           S+I+ Y   G    AH LFD++   +     V++N +I+ Y + G+ D+A+ + ++M   
Sbjct: 150 SLINSYAVTGNFKHAHLLFDRIQEPD----AVSWNSVIKGYVKAGEMDMALTLFRKMPE- 204

Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
               +  +WT MISG+ Q G   +AL LF EM    V P+ V++ SA+SAC+ L AL  G
Sbjct: 205 --KNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQG 262

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
             IHS A K     D ++   LI+MY+KC E+E A  VF  +K K V  W ++I+GY   
Sbjct: 263 KWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYH 322

Query: 408 GYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTAS 467
           G   +A   F++MQ   V PN IT+  +++     G  +E   +F  + ++  +K     
Sbjct: 323 GLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEH 382

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +  ++    + G  N A    +KM      PN V   S+L AC
Sbjct: 383 YGCMVDLLGRAGLLNEANRFIQKMP---LKPNAVIWGSLLKAC 422



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 127/288 (44%), Gaps = 15/288 (5%)

Query: 77  RKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN-LYTWSAMIGAYSRD 135
           +  H   + + E D      ++  Y K G +D A  +F  M E+N   +W+ MI  Y + 
Sbjct: 162 KHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQA 221

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
              +E ++LF  M    + PD+      L AC   G  E GK +HS   K      R   
Sbjct: 222 GMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANK-----TRTRI 276

Query: 196 NSVLA-----VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC 250
           +SVL      +Y KCG++  A   F++M  K    W ++ISGY   G   EA   F +M 
Sbjct: 277 DSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGREAISKFLEMQ 336

Query: 251 REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRT 309
              +K   +TF  ++ + +  G  +    +   +E    + P +  + CM+    + G  
Sbjct: 337 NMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLL 396

Query: 310 SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           ++A    ++M    + PN V   S + AC   K + +G +I  + ++M
Sbjct: 397 NEANRFIQKMP---LKPNAVIWGSLLKACQIHKNIELGEKIGEILIEM 441



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 8/239 (3%)

Query: 6   LTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQ 65
           LT F+++     +K+N     T +      G   EA+ +   +          +  + L 
Sbjct: 196 LTLFRKM----PEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVSLASALS 251

Query: 66  ACIDSNSIHLARKLHAFLNLV-TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYT 124
           AC    ++   + +H++ N   T ID  +   L+ +YAKCG +++A  VF++M+ +++  
Sbjct: 252 ACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMKTKSVQV 311

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK-LMHSLV 183
           W+A+I  Y+     RE +  F  M   G+ P+   F  +L AC   G  E GK + +++ 
Sbjct: 312 WTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEGKSVFNTIE 371

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK-DGVAWNSMISGYFQIGENDE 241
               +         ++ +  + G L  A RF + M  K + V W S++    QI +N E
Sbjct: 372 RDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKA-CQIHKNIE 429


>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 214/734 (29%), Positives = 364/734 (49%), Gaps = 72/734 (9%)

Query: 179  MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
            +H+ +   G+         ++  Y + G    ++R F++  + D   W  +I  Y   G 
Sbjct: 367  LHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGF 426

Query: 239  NDEAHRLFDKMC-REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
             +EA  L+ +M  +++ ++    F  ++++ +  G   V                     
Sbjct: 427  FEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVG-------------------- 466

Query: 298  CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM--------E 349
                   +NG+ S+ LD+F +M    V P+ VT+ S   AC++L +L +G          
Sbjct: 467  ------GKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRS 520

Query: 350  IHSLAVKMGFTDDV-LVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
            +H   ++     ++  +G +L+ +Y+    L    +VF+ IK+K + SWN++I+ + + G
Sbjct: 521  VHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNG 580

Query: 409  YCGKAYELFIKMQESDVPPN------------VITWNVL---ISGYI-QNGN-----EDE 447
               +A  LF++MQ   + P+             I+++ L   I GYI + GN     ++ 
Sbjct: 581  QPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGNFNDFVQNA 640

Query: 448  AVDLFQRMG-------KNDKVK-RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
             +D++ + G         +K+K ++  +WNS+I G+ Q G    A+ +F +M  +C   +
Sbjct: 641  LIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMD 700

Query: 500  CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
             +T LSV+ AC++L    K K +H  ++   L     +  +L D Y+K G +  +  +FD
Sbjct: 701  KLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFD 760

Query: 560  GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
             MS + I++W+ +I GY +HG  +A + LF+QM   G+KPN  TF+ I+ A S AG V+ 
Sbjct: 761  RMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEE 820

Query: 620  GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
            GK  F S++E + + P  +H++ M+DL  R+G L  A + I  +P   +SSIW ALL  C
Sbjct: 821  GKLYFNSMSE-FGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGC 879

Query: 680  RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFG 739
            RIH  ID+     + L D++  D     L+  IYA  G  +   KVR + +    R   G
Sbjct: 880  RIHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPG 939

Query: 740  QCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTAR-----SSHSGLCIEEEEKEE 794
               IE+   +Y F  G  S S +  +Y +L+N    V A+       +S +   +  KE 
Sbjct: 940  YSTIEIDKKIYRFGPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKEN 999

Query: 795  ISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCL 854
                HSEKLA+AF +I +++   T+RI KN+R+C  CH  AK  S +   EI + D    
Sbjct: 1000 NVVSHSEKLAIAFGII-NTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRF 1058

Query: 855  HHFKNGQCSCGDYW 868
            H F+NG CSC DYW
Sbjct: 1059 HCFRNGSCSCNDYW 1072



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 190/451 (42%), Gaps = 92/451 (20%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV-QDGL 153
           TKL+  YA+ G  + ++ VF+   + + + W  +I  Y     + E V L+  MV QD  
Sbjct: 384 TKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQT 443

Query: 154 FPDDFLFPKILQACGNCGDF---------------------------------------- 173
              +F+FP +L+AC   GD                                         
Sbjct: 444 QISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSE 503

Query: 174 ------------EAGKLMHSLVIKLGMSC-VRRVRNSVLAVYVKCGKLIWARRFFESMDE 220
                       + G+ +H  VI+  M   +  +  +++ +Y   G L    + FE++ E
Sbjct: 504 LGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKE 563

Query: 221 KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI------------KLGVVTF------- 261
           K  ++WN++IS + + G+ +EA  LF +M  + +              G ++F       
Sbjct: 564 KTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQI 623

Query: 262 ---------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN 306
                          N LI  Y + G    A +M ++++   +     TW  MI GF+QN
Sbjct: 624 HGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLV----TWNSMICGFSQN 679

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           G + +A+ LF +M    V  + +T  S I AC+ L  L  G  +H   +  G   D  + 
Sbjct: 680 GYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLD 739

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
            +L +MYSKC EL+ A  VFD + ++ + SW+ MIAGY   G       LF +M  S + 
Sbjct: 740 TALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIK 799

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMGK 457
           PN IT+  ++S     G  +E    F  M +
Sbjct: 800 PNDITFMHILSACSHAGAVEEGKLYFNSMSE 830



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 174/355 (49%), Gaps = 44/355 (12%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLAR--------KLHAFL--- 83
           NG+ +E + +   + ++  +    T +++ +AC +  S+ L R         +H F+   
Sbjct: 469 NGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRR 528

Query: 84  NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
            +  E+D F+   L+ +YA  G L D  +VFE ++E+ + +W+ +I  ++R+ +  E + 
Sbjct: 529 AMDPELD-FLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALL 587

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
           LF  M   GL PD +     L ACG     + G  +H  +IK G +    V+N+++ +Y 
Sbjct: 588 LFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYA 646

Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           KCG +  A + FE + EK  V WNSMI G+ Q G + EA  LFD+M    +K+  +TF  
Sbjct: 647 KCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLS 706

Query: 264 LIRSYNQLG---------------------QCDVAM-EMVKRMESLGITPDVF------- 294
           +I++ + LG                       D A+ +M  +   L +   VF       
Sbjct: 707 VIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERS 766

Query: 295 --TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
             +W+ MI+G+  +G+ +  + LF +M   G+ PN +T    +SAC+   A+  G
Sbjct: 767 IVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEG 821



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 151/316 (47%), Gaps = 6/316 (1%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +     NG+  EA+ +   + TQG      +  + L AC   +   L  ++H ++  
Sbjct: 570 NTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIK 629

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
               + FV+  L+ +YAKCG +  A ++FE ++E++L TW++MI  +S++    E + LF
Sbjct: 630 TGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLF 689

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M  + +  D   F  ++QAC + G  E GK +H  +I  G+     +  ++  +Y KC
Sbjct: 690 DQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKC 749

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G+L  A   F+ M E+  V+W+ MI+GY   G+ +    LF++M    IK   +TF  ++
Sbjct: 750 GELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHIL 809

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV--- 322
            + +  G  +        M   G+ P    + CM+   ++ G  + A  +   + F    
Sbjct: 810 SACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANS 869

Query: 323 ---GVMPNGVTITSAI 335
              G + NG  I   I
Sbjct: 870 SIWGALLNGCRIHKRI 885



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 99/257 (38%), Gaps = 49/257 (19%)

Query: 494 SCFYP-NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
           +CF+  N    L+    CA    S  + ++H  +    L    P    LI++YA+ G   
Sbjct: 341 ACFFTLNSSRSLTSHKRCA---TSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFE 397

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM-KSFGLKPNRGTFLSIILAH 611
            S+ +FD     D   W  LI  YV  GF+  A+ L+ +M      + +   F S++ A 
Sbjct: 398 SSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKAC 457

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM---PIEPD 668
           S  G + +G                           G++G+  E ++    M    +EPD
Sbjct: 458 SGFGDLSVG---------------------------GKNGQASEGLDMFSQMISEAVEPD 490

Query: 669 SSIWEALLTACRIHGNIDLAVLA------------IERLFDLEPGDVLIQRLILQIYAIC 716
           S    ++  AC   G++ L  L             I R  D  P    +   ++++YA  
Sbjct: 491 SVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMD--PELDFLGPALMELYADT 548

Query: 717 GKPEDALKVRKLERENT 733
           G   D  KV +  +E T
Sbjct: 549 GNLRDCHKVFETIKEKT 565


>gi|222641236|gb|EEE69368.1| hypothetical protein OsJ_28705 [Oryza sativa Japonica Group]
          Length = 662

 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 197/596 (33%), Positives = 319/596 (53%), Gaps = 32/596 (5%)

Query: 285 ESLGITP--DVFTWTCMISGFAQN-GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
           E+   TP     T+ C+++G+A+  GR + A  LF  +      P+ V+  + +S C   
Sbjct: 87  EAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIP----TPDAVSYNTLLS-CHFA 141

Query: 342 KALAMGME--IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
              A G      S+ V+     DV+  N++++  SK   +E A+ VF  +  ++  SWN+
Sbjct: 142 SGDADGARRLFASMPVR-----DVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNA 196

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           M++G+  +     A E F    E     + + W  ++SGY+  GN  +A++ F+ M    
Sbjct: 197 MVSGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEYFEAMPV-- 251

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKM-QSSCFYPNCVTILSVLPACAYLVASNK 518
              RN  SWN+++AGY +    ++AL +FR M + +   PN  T+ SVL  C+ L A   
Sbjct: 252 ---RNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGF 308

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
            K+IH   ++  L  +L V  SL+  Y K G++  +  +F  M ++D++ WN++I GY  
Sbjct: 309 GKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQ 368

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           HG    A++LF++MK  G++PN  TF++++ A    G+ D G + F  + E Y I P ++
Sbjct: 369 HGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVD 428

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
           HYS M+DL  R+GKLE A++ I  MP EP  S +  LL ACR++ N++ A LA  +L + 
Sbjct: 429 HYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEK 488

Query: 699 EPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS 758
           +P        +  IYA   + +D  +VR+  ++N    + G  WIE+K +++ F +    
Sbjct: 489 DPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRL 548

Query: 759 ESYSDLLYSWLQNVPENVTARSSHSGL-----CIEEEEKEEISGIHSEKLALAFALIGSS 813
                L++  L  + E + A      L      ++E  K ++   HSEKLA++F LI  S
Sbjct: 549 HPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLI--S 606

Query: 814 QAPH-TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            AP  T+RI KN+R+C  CH  AK +S +   EI L D+   HHF+ G CSCGDYW
Sbjct: 607 TAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 662



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 202/421 (47%), Gaps = 22/421 (5%)

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD-QRWREVVELFFLMVQD 151
           + T  ++   + G L  A E F     +   T++ ++  Y+R   R  +   LF  +   
Sbjct: 68  LSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPT- 126

Query: 152 GLFPDDFLFPKILQACGNCGDFE-AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
              PD   +  +L      GD + A +L  S+ ++  +S      N++++   K G +  
Sbjct: 127 ---PDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSW-----NTMVSGLSKSGAVEE 178

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A+  F +M  ++ V+WN+M+SG+    +   A   F        K   V +  ++  Y  
Sbjct: 179 AKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPE---KGDAVLWTAMVSGYMD 235

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGV 329
           +G    A+E  + M       ++ +W  +++G+ +N     AL LF+ M     V PN  
Sbjct: 236 IGNVVKAIEYFEAMP----VRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNAS 291

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           T++S +  C++L AL  G +IH   +K+  + ++ VG SL++MY KC +L +A ++F  +
Sbjct: 292 TLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEM 351

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
             +DV +WN+MI+GY Q G   +A  LF +M++  V PN IT+  +++  I  G  D  +
Sbjct: 352 HTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGI 411

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
             F+ M +   ++     ++ ++    + G+   A+ + R M    F P+     ++L A
Sbjct: 412 RCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMP---FEPHPSAYGTLLAA 468

Query: 510 C 510
           C
Sbjct: 469 C 469



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 157/326 (48%), Gaps = 17/326 (5%)

Query: 82  FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           F N   + D  + T ++S Y   G +  A E FE M  RNL +W+A++  Y ++    + 
Sbjct: 214 FRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDA 273

Query: 142 VELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
           + LF  MV++  + P+      +L  C N      GK +H   +KL +S    V  S+++
Sbjct: 274 LRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVS 333

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y KCG L  A + F  M  +D VAWN+MISGY Q G+  EA  LF++M  E ++   +T
Sbjct: 334 MYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWIT 393

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           F  ++ +    G CD  +   + M+ L GI P V  ++CM+    + G+  +A+DL + M
Sbjct: 394 FVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSM 453

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS---LINMYSKC 376
            F    P+     + ++AC   K L    E   LA       D     +   L N+Y+  
Sbjct: 454 PF---EPHPSAYGTLLAACRVYKNL----EFAELAAGKLIEKDPQSAGAYVQLANIYAGA 506

Query: 377 EELEAAERVFDMIKDKDV-----YSW 397
            + +   RV   +KD  V     YSW
Sbjct: 507 NQWDDVSRVRRWMKDNAVVKTPGYSW 532



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 138/339 (40%), Gaps = 85/339 (25%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
           GRL +A  + D I T  A     +Y  LL     S     AR+L A + +    DV    
Sbjct: 112 GRLADARHLFDRIPTPDAV----SYNTLLSCHFASGDADGARRLFASMPVR---DVVSWN 164

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            ++S  +K G +++A+ VF  M  RN  +W+AM+  ++  +      E F    + G   
Sbjct: 165 TMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKG--- 221

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D  L+                                    ++++ Y+  G ++ A  +F
Sbjct: 222 DAVLW-----------------------------------TAMVSGYMDIGNVVKAIEYF 246

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE-----------EIKLGVVTFNI- 263
           E+M  ++ V+WN++++GY +    D+A RLF  M RE            + LG    +  
Sbjct: 247 EAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSAL 306

Query: 264 ------------------------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                                   L+  Y + G    A ++   M     T DV  W  M
Sbjct: 307 GFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMH----TRDVVAWNAM 362

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
           ISG+AQ+G   +A++LF+ M   GV PN +T  + ++AC
Sbjct: 363 ISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTAC 401


>gi|27817913|dbj|BAC55678.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|37806252|dbj|BAC99769.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 613

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 197/596 (33%), Positives = 319/596 (53%), Gaps = 32/596 (5%)

Query: 285 ESLGITP--DVFTWTCMISGFAQN-GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
           E+   TP     T+ C+++G+A+  GR + A  LF  +      P+ V+  + +S C   
Sbjct: 38  EAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIP----TPDAVSYNTLLS-CHFA 92

Query: 342 KALAMGME--IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
              A G      S+ V+     DV+  N++++  SK   +E A+ VF  +  ++  SWN+
Sbjct: 93  SGDADGARRLFASMPVR-----DVVSWNTMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNA 147

Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
           M++G+  +     A E F    E     + + W  ++SGY+  GN  +A++ F+ M    
Sbjct: 148 MVSGFACSRDMSAAEEWFRNAPEKG---DAVLWTAMVSGYMDIGNVVKAIEYFEAMPV-- 202

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKM-QSSCFYPNCVTILSVLPACAYLVASNK 518
              RN  SWN+++AGY +    ++AL +FR M + +   PN  T+ SVL  C+ L A   
Sbjct: 203 ---RNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGF 259

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
            K+IH   ++  L  +L V  SL+  Y K G++  +  +F  M ++D++ WN++I GY  
Sbjct: 260 GKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQ 319

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
           HG    A++LF++MK  G++PN  TF++++ A    G+ D G + F  + E Y I P ++
Sbjct: 320 HGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVD 379

Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
           HYS M+DL  R+GKLE A++ I  MP EP  S +  LL ACR++ N++ A LA  +L + 
Sbjct: 380 HYSCMVDLLCRAGKLERAVDLIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEK 439

Query: 699 EPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS 758
           +P        +  IYA   + +D  +VR+  ++N    + G  WIE+K +++ F +    
Sbjct: 440 DPQSAGAYVQLANIYAGANQWDDVSRVRRWMKDNAVVKTPGYSWIEIKGVMHEFRSNDRL 499

Query: 759 ESYSDLLYSWLQNVPENVTARSSHSGL-----CIEEEEKEEISGIHSEKLALAFALIGSS 813
                L++  L  + E + A      L      ++E  K ++   HSEKLA++F LI  S
Sbjct: 500 HPQLYLIHEKLGQLAERMKAMGYVPDLDFVLHDVDETLKVQMLMRHSEKLAISFGLI--S 557

Query: 814 QAPH-TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            AP  T+RI KN+R+C  CH  AK +S +   EI L D+   HHF+ G CSCGDYW
Sbjct: 558 TAPGMTLRIFKNLRVCGDCHNAAKVISKIEDREIILRDTTRFHHFRGGHCSCGDYW 613



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 202/421 (47%), Gaps = 22/421 (5%)

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD-QRWREVVELFFLMVQD 151
           + T  ++   + G L  A E F     +   T++ ++  Y+R   R  +   LF  +   
Sbjct: 19  LSTVAVAAAVRRGDLTGAEEAFASTPRKTTATYNCLLAGYARALGRLADARHLFDRIPT- 77

Query: 152 GLFPDDFLFPKILQACGNCGDFE-AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
              PD   +  +L      GD + A +L  S+ ++  +S      N++++   K G +  
Sbjct: 78  ---PDAVSYNTLLSCHFASGDADGARRLFASMPVRDVVSW-----NTMVSGLSKSGAVEE 129

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A+  F +M  ++ V+WN+M+SG+    +   A   F        K   V +  ++  Y  
Sbjct: 130 AKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPE---KGDAVLWTAMVSGYMD 186

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGV 329
           +G    A+E  + M       ++ +W  +++G+ +N     AL LF+ M     V PN  
Sbjct: 187 IGNVVKAIEYFEAMP----VRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNAS 242

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           T++S +  C++L AL  G +IH   +K+  + ++ VG SL++MY KC +L +A ++F  +
Sbjct: 243 TLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEM 302

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
             +DV +WN+MI+GY Q G   +A  LF +M++  V PN IT+  +++  I  G  D  +
Sbjct: 303 HTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTACIHTGLCDFGI 362

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
             F+ M +   ++     ++ ++    + G+   A+ + R M    F P+     ++L A
Sbjct: 363 RCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSMP---FEPHPSAYGTLLAA 419

Query: 510 C 510
           C
Sbjct: 420 C 420



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 157/326 (48%), Gaps = 17/326 (5%)

Query: 82  FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           F N   + D  + T ++S Y   G +  A E FE M  RNL +W+A++  Y ++    + 
Sbjct: 165 FRNAPEKGDAVLWTAMVSGYMDIGNVVKAIEYFEAMPVRNLVSWNAVVAGYVKNSHADDA 224

Query: 142 VELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
           + LF  MV++  + P+      +L  C N      GK +H   +KL +S    V  S+++
Sbjct: 225 LRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLPLSRNLTVGTSLVS 284

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y KCG L  A + F  M  +D VAWN+MISGY Q G+  EA  LF++M  E ++   +T
Sbjct: 285 MYCKCGDLSSACKLFGEMHTRDVVAWNAMISGYAQHGDGKEAINLFERMKDEGVEPNWIT 344

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           F  ++ +    G CD  +   + M+ L GI P V  ++CM+    + G+  +A+DL + M
Sbjct: 345 FVAVLTACIHTGLCDFGIRCFEGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDLIRSM 404

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS---LINMYSKC 376
            F    P+     + ++AC   K L    E   LA       D     +   L N+Y+  
Sbjct: 405 PF---EPHPSAYGTLLAACRVYKNL----EFAELAAGKLIEKDPQSAGAYVQLANIYAGA 457

Query: 377 EELEAAERVFDMIKDKDV-----YSW 397
            + +   RV   +KD  V     YSW
Sbjct: 458 NQWDDVSRVRRWMKDNAVVKTPGYSW 483



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 136/339 (40%), Gaps = 85/339 (25%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
           GRL +A  + D I T  A     +Y  LL     S     AR+L A + +    DV    
Sbjct: 63  GRLADARHLFDRIPTPDAV----SYNTLLSCHFASGDADGARRLFASMPVR---DVVSWN 115

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            ++S  +K G +++A+ VF  M  RN  +W+AM+  ++  +      E F    + G   
Sbjct: 116 TMVSGLSKSGAVEEAKAVFLAMPVRNSVSWNAMVSGFACSRDMSAAEEWFRNAPEKG--- 172

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D  L+  ++                                     Y+  G ++ A  +F
Sbjct: 173 DAVLWTAMVSG-----------------------------------YMDIGNVVKAIEYF 197

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE-----------EIKLGVVTFNI- 263
           E+M  ++ V+WN++++GY +    D+A RLF  M RE            + LG    +  
Sbjct: 198 EAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSAL 257

Query: 264 ------------------------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCM 299
                                   L+  Y + G    A ++   M     T DV  W  M
Sbjct: 258 GFGKQIHQWCMKLPLSRNLTVGTSLVSMYCKCGDLSSACKLFGEMH----TRDVVAWNAM 313

Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
           ISG+AQ+G   +A++LF+ M   GV PN +T  + ++AC
Sbjct: 314 ISGYAQHGDGKEAINLFERMKDEGVEPNWITFVAVLTAC 352


>gi|330689867|gb|AEC33263.1| putative pentatricopeptide protein [Triticum aestivum]
          Length = 644

 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 191/540 (35%), Positives = 283/540 (52%), Gaps = 49/540 (9%)

Query: 229 MISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG 288
           +++ Y + G  DEAH +FD M     K   +++N LI +Y+     + AM    RM + G
Sbjct: 113 LLAAYARHGRADEAHHVFDAM---PSKRATMSWNTLISAYSVCCDPNNAMATFARMAAAG 169

Query: 289 -ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT---DLKAL 344
              PD  TWT ++S  A+ G+    L+LF +M   G   N  ++  A+SAC    DL AL
Sbjct: 170 EALPDAVTWTTLLSAHARCGKHPVVLELFGDMHRSGCEGNAESVAVALSACPYAGDL-AL 228

Query: 345 AMGMEIHSLAVKMGFTDDVL-VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           A G  IH   V  G     L V NSL+ MY K  +++ A  VF    ++           
Sbjct: 229 AKGRAIHGYGVAKGVVRGYLFVTNSLVCMYGKLGKMDDAREVFREAGER----------- 277

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM-GKNDKVK 462
                                   N +TWN LI+ Y   G  DEA+++  RM  +   V 
Sbjct: 278 ------------------------NTVTWNALITSYAAAGMCDEALNVLVRMEQRGGMVA 313

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
            N  SW+++I G+   G    AL +FR+MQ     PN VT+ +VL AC   +A    +E+
Sbjct: 314 PNVMSWSAVIGGFASSGDNERALELFRRMQQQWLSPNVVTLATVLSACTEQLAVRLGREV 373

Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
           H   +R  ++    V N LI+ YAK G +  +RT+FDGM S+D+++WNS++ GY +HG  
Sbjct: 374 HADAIRSMVDRHSLVANGLINMYAKCGRVADARTVFDGMKSRDLVSWNSMLAGYGMHGLC 433

Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
             AL +F  M    + P+  TF++++ A S AG V  G+++F  +   ++I P +EHY+ 
Sbjct: 434 DDALAVFTDMAEAKVDPDGVTFVAVLSACSHAGRVSEGRRLFDQMILEHKISPSMEHYTC 493

Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
           M+DL GR+G L+EA EFIE MP+  D  +W ALL +CRIHG+  +A   I +   L+ G 
Sbjct: 494 MVDLLGRAGLLKEASEFIETMPMGADLCVWGALLNSCRIHGDAAMAEATIAKA--LQAGV 551

Query: 703 VLI--QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSES 760
           V      LI  +YA CG  +D+ +VR + RE   R + GQ W+EVKN V+ F+ G    S
Sbjct: 552 VTTGNHTLITNLYAACGMWDDSKRVRVMTREAGLRKNPGQSWVEVKNKVFAFMAGSVPPS 611



 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 135/427 (31%), Positives = 209/427 (48%), Gaps = 39/427 (9%)

Query: 64  LQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM-RERNL 122
           + + I ++++HL   LHA  +        V  +LL+ YA+ G  D+A  VF+ M  +R  
Sbjct: 90  IASAIHAHALHLG--LHAHPD--------VAGQLLAAYARHGRADEAHHVFDAMPSKRAT 139

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMHS 181
            +W+ +I AYS        +  F  M   G   PD   +  +L A   CG        H 
Sbjct: 140 MSWNTLISAYSVCCDPNNAMATFARMAAAGEALPDAVTWTTLLSAHARCGK-------HP 192

Query: 182 LVIKL----GMSCVRRVRNSVLAVYVKC---GKLIWAR-RFFESMDEKDGVA------WN 227
           +V++L      S       SV      C   G L  A+ R         GV        N
Sbjct: 193 VVLELFGDMHRSGCEGNAESVAVALSACPYAGDLALAKGRAIHGYGVAKGVVRGYLFVTN 252

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
           S++  Y ++G+ D+A  +F    RE  +   VT+N LI SY   G CD A+ ++ RME  
Sbjct: 253 SLVCMYGKLGKMDDAREVF----REAGERNTVTWNALITSYAAAGMCDEALNVLVRMEQR 308

Query: 288 G--ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
           G  + P+V +W+ +I GFA +G   +AL+LF+ M    + PN VT+ + +SACT+  A+ 
Sbjct: 309 GGMVAPNVMSWSAVIGGFASSGDNERALELFRRMQQQWLSPNVVTLATVLSACTEQLAVR 368

Query: 346 MGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC 405
           +G E+H+ A++       LV N LINMY+KC  +  A  VFD +K +D+ SWNSM+AGY 
Sbjct: 369 LGREVHADAIRSMVDRHSLVANGLINMYAKCGRVADARTVFDGMKSRDLVSWNSMLAGYG 428

Query: 406 QAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
             G C  A  +F  M E+ V P+ +T+  ++S     G   E   LF +M    K+  + 
Sbjct: 429 MHGLCDDALAVFTDMAEAKVDPDGVTFVAVLSACSHAGRVSEGRRLFDQMILEHKISPSM 488

Query: 466 ASWNSLI 472
             +  ++
Sbjct: 489 EHYTCMV 495



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 167/376 (44%), Gaps = 58/376 (15%)

Query: 64  LQACIDSNSIHLA--RKLHAF--LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
           L AC  +  + LA  R +H +     V    +FV   L+ +Y K G +DDAREVF +  E
Sbjct: 217 LSACPYAGDLALAKGRAIHGYGVAKGVVRGYLFVTNSLVCMYGKLGKMDDAREVFREAGE 276

Query: 120 RNLYTWSAMIGAYSR--------------DQR----------WREVV------------- 142
           RN  TW+A+I +Y+               +QR          W  V+             
Sbjct: 277 RNTVTWNALITSYAAAGMCDEALNVLVRMEQRGGMVAPNVMSWSAVIGGFASSGDNERAL 336

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
           ELF  M Q  L P+      +L AC        G+ +H+  I+  +     V N ++ +Y
Sbjct: 337 ELFRRMQQQWLSPNVVTLATVLSACTEQLAVRLGREVHADAIRSMVDRHSLVANGLINMY 396

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
            KCG++  AR  F+ M  +D V+WNSM++GY   G  D+A  +F  M   ++    VTF 
Sbjct: 397 AKCGRVADARTVFDGMKSRDLVSWNSMLAGYGMHGLCDDALAVFTDMAEAKVDPDGVTFV 456

Query: 263 ILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS- 320
            ++ + +  G+      +  +M     I+P +  +TCM+    + G       L KE S 
Sbjct: 457 AVLSACSHAGRVSEGRRLFDQMILEHKISPSMEHYTCMVDLLGRAG-------LLKEASE 509

Query: 321 FVGVMPNGVTI---TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS--LINMYSK 375
           F+  MP G  +    + +++C      AM     + A++ G    V  GN   + N+Y+ 
Sbjct: 510 FIETMPMGADLCVWGALLNSCRIHGDAAMAEATIAKALQAGV---VTTGNHTLITNLYAA 566

Query: 376 CEELEAAERVFDMIKD 391
           C   + ++RV  M ++
Sbjct: 567 CGMWDDSKRVRVMTRE 582



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 7/205 (3%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T   +L AC +  ++ L R++HA  +  + +    V   L+++YAKCG + DAR VF+ M
Sbjct: 353 TLATVLSACTEQLAVRLGREVHADAIRSMVDRHSLVANGLINMYAKCGRVADARTVFDGM 412

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG- 176
           + R+L +W++M+  Y       + + +F  M +  + PD   F  +L AC + G    G 
Sbjct: 413 KSRDLVSWNSMLAGYGMHGLCDDALAVFTDMAEAKVDPDGVTFVAVLSACSHAGRVSEGR 472

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD-EKDGVAWNSMISGYFQ 235
           +L   ++++  +S        ++ +  + G L  A  F E+M    D   W ++++    
Sbjct: 473 RLFDQMILEHKISPSMEHYTCMVDLLGRAGLLKEASEFIETMPMGADLCVWGALLNSCRI 532

Query: 236 IGENDEAHRLFDKMCREEIKLGVVT 260
            G+   A     K     ++ GVVT
Sbjct: 533 HGDAAMAEATIAK----ALQAGVVT 553



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 141/308 (45%), Gaps = 49/308 (15%)

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQS-SCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           WN L+  +    + + AL ++R+M++ S   PN  T+   L A    +AS     IH   
Sbjct: 43  WNRLLRAHICRSRPDLALALYRRMRALSPTLPNSYTLPLALRAATSPIAS----AIHAHA 98

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD-IITWNSLICGYVLHGFWHAA 585
           L   L +   V   L+  YA+ G    +  +FD M SK   ++WN+LI  Y +    + A
Sbjct: 99  LHLGLHAHPDVAGQLLAAYARHGRADEAHHVFDAMPSKRATMSWNTLISAYSVCCDPNNA 158

Query: 586 LDLFDQMKSFGLK-PNRGTFLSIILAHSLAG----MVDL------------GKKVFCSIT 628
           +  F +M + G   P+  T+ +++ AH+  G    +++L             + V  +++
Sbjct: 159 MATFARMAAAGEALPDAVTWTTLLSAHARCGKHPVVLELFGDMHRSGCEGNAESVAVALS 218

Query: 629 EC----------------YQIIP-MIEHY----SAMIDLYGRSGKLEEAMEFIEDMPIEP 667
            C                Y +   ++  Y    ++++ +YG+ GK+++A E   +   E 
Sbjct: 219 ACPYAGDLALAKGRAIHGYGVAKGVVRGYLFVTNSLVCMYGKLGKMDDAREVFREAG-ER 277

Query: 668 DSSIWEALLTACRIHGNIDLA---VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
           ++  W AL+T+    G  D A   ++ +E+   +   +V+    ++  +A  G  E AL+
Sbjct: 278 NTVTWNALITSYAAAGMCDEALNVLVRMEQRGGMVAPNVMSWSAVIGGFASSGDNERALE 337

Query: 725 V-RKLERE 731
           + R+++++
Sbjct: 338 LFRRMQQQ 345


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 196/619 (31%), Positives = 311/619 (50%), Gaps = 59/619 (9%)

Query: 292 DVFTWTCMISGFAQNGRTSQALD--LFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
           D+  W  M++G+A +G    A+   L  +M    + PN  T+ + +       ALA G  
Sbjct: 75  DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 134

Query: 350 IHSLAV----------KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
           +H+  +          K   TD VL+G +L++MY+KC  L  A RVFD +  ++  +W++
Sbjct: 135 VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSA 194

Query: 400 MIAGYCQAGYCGKAYELFIKM------------------------------------QES 423
           +I G+       +A+ LF  M                                     +S
Sbjct: 195 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS 254

Query: 424 DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
            V  ++   N L+S Y + G  D+A+ LF  M   D     T S+++L++GY Q G+   
Sbjct: 255 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKD-----TVSYSALVSGYVQNGRAEE 309

Query: 484 ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID 543
           A  VF+KMQ+    P+  T++S++PAC++L A    +  HG V+ R L S   + N+LID
Sbjct: 310 AFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALID 369

Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGT 603
            YAK G I  SR +F+ M S+DI++WN++I GY +HG    A  LF +M + G  P+  T
Sbjct: 370 MYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVT 429

Query: 604 FLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
           F+ ++ A S +G+V  GK  F  +   Y + P +EHY  M+DL  R G L+EA EFI+ M
Sbjct: 430 FICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSM 489

Query: 664 PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDAL 723
           P+  D  +W ALL ACR++ NIDL       + +L P       L+  IY+  G+ ++A 
Sbjct: 490 PLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAA 549

Query: 724 KVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHS 783
           +VR +++    + S G  WIE+   ++ FV G  S   S  +Y  L N+   +       
Sbjct: 550 EVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQP 609

Query: 784 GLCIEEEEKEEISGI-----HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYV 838
                 ++ EE         HSEKLA+A+ ++  S+   TI + KN+R+C  CH   K++
Sbjct: 610 DTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSE-DKTIFVTKNLRVCGDCHTVIKHI 668

Query: 839 SMMHHCEIFLADSKCLHHF 857
           S++    I + D+   HHF
Sbjct: 669 SLVKRRAIIVRDANRFHHF 687



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 205/450 (45%), Gaps = 59/450 (13%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T+   L+AC      H  R +H   ++   + D+FV T LL +Y KC CL DA  +F  M
Sbjct: 12  TFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATM 71

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVE--LFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
             R+L  W+AM+  Y+    +   V   L   M    L P+      +L      G    
Sbjct: 72  PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQ 131

Query: 176 GKLMHSLVIKLGMSCVRRVRNS-------------VLAVYVKCGKLIWARRFFESMDEKD 222
           G  +H+  I+   +C+   RNS             +L +Y KCG L++ARR F++M  ++
Sbjct: 132 GTSVHAYCIR---ACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 188

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCRE---------------------EIKLG---- 257
            V W+++I G+       +A  LF  M  +                      +++G    
Sbjct: 189 EVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLH 248

Query: 258 -----------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN 306
                      +   N L+  Y + G  D A+ +   M       D  +++ ++SG+ QN
Sbjct: 249 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMA----VKDTVSYSALVSGYVQN 304

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           GR  +A  +FK+M    V P+  T+ S I AC+ L AL  G   H   +  G   +  + 
Sbjct: 305 GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSIC 364

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           N+LI+MY+KC  ++ + +VF+M+  +D+ SWN+MIAGY   G   +A  LF++M     P
Sbjct: 365 NALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFP 424

Query: 427 PNVITWNVLISGYIQNGNEDEAVDLFQRMG 456
           P+ +T+  L+S    +G   E    F  MG
Sbjct: 425 PDGVTFICLLSACSHSGLVIEGKHWFHVMG 454



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 198/439 (45%), Gaps = 74/439 (16%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M++  + P+++ FP  L+AC    D   G+ +H   I  G+     V  ++L +YVKC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIG--ENDEAHRLFDKMCREEIKLGVVTFNILI 265
           L  A   F +M  +D VAWN+M++GY   G   +  AH L  +M    ++    T   L+
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 266 RSYNQLGQ----------CDVA----------------------MEMVKRMESLGITPDV 293
               Q G           C  A                      ++M  +  SL     V
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 294 F---------TWTCMISGFAQNGRTSQALDLFKEMSFVGV-MPNGVTITSAISACTDLKA 343
           F         TW+ +I GF    R +QA  LFK M   G+   +  +I SA+ AC  L  
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDH 240

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
           L MG ++H+L  K G   D+  GNSL++MY+K   ++ A  +FD +  KD  S++++++G
Sbjct: 241 LRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSG 300

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-----GYIQNGNEDEA---------- 448
           Y Q G   +A+ +F KMQ  +V P+  T   LI        +Q+G               
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360

Query: 449 -------VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
                  +D++ + G+ D  +        R+  SWN++IAGY   G    A  +F +M +
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNN 420

Query: 494 SCFYPNCVTILSVLPACAY 512
             F P+ VT + +L AC++
Sbjct: 421 LGFPPDGVTFICLLSACSH 439



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 124/468 (26%), Positives = 205/468 (43%), Gaps = 56/468 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFL--------- 83
           +G  + A+  L S+  Q  ++R N  T + LL       ++     +HA+          
Sbjct: 89  HGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTSVHAYCIRACLHPNR 148

Query: 84  NLVTEID--VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
           N  +++   V + T LL +YAKCG L  AR VF+ M  RN  TWSA+IG +    R  + 
Sbjct: 149 NSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSALIGGFVLCSRMTQA 208

Query: 142 VELFFLMVQDGL-FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
             LF  M+  GL F         L+AC +      G+ +H+L+ K G+       NS+L+
Sbjct: 209 FLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKSGVHADLTAGNSLLS 268

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y K G +  A   F+ M  KD V++++++SGY Q G  +EA  +F KM    ++    T
Sbjct: 269 MYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAAT 328

Query: 261 F-----------------------------------NILIRSYNQLGQCDVAMEMVKRME 285
                                               N LI  Y + G+ D++ ++   M 
Sbjct: 329 MVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKCGRIDLSRQVFNMMP 388

Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
           S     D+ +W  MI+G+  +G   +A  LF EM+ +G  P+GVT    +SAC+    + 
Sbjct: 389 S----RDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLLSACSHSGLVI 444

Query: 346 MGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAG 403
            G    H +    G T  +     ++++ S+   L EA E +  M    DV  W +++ G
Sbjct: 445 EGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRADVRVWVALL-G 503

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
            C+        +   +M +   P     + +L + Y   G  DEA ++
Sbjct: 504 ACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEV 551



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 14/191 (7%)

Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
           PN  T    L AC+ L   +  + IH   +   L++ L V  +L+D Y K   +  +  I
Sbjct: 8   PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67

Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALD--LFDQMKSFGLKPNRGTFLSIILAHSLAG 615
           F  M ++D++ WN+++ GY  HG +H A+   L  QM+   L+PN  T ++++   +  G
Sbjct: 68  FATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQG 127

Query: 616 MVDLGKKV--FCSITECY--------QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPI 665
            +  G  V  +C I  C         ++   +   +A++D+Y + G L  A    + MP 
Sbjct: 128 ALAQGTSVHAYC-IRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPA 186

Query: 666 EPDSSIWEALL 676
             + + W AL+
Sbjct: 187 RNEVT-WSALI 196


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 215/686 (31%), Positives = 335/686 (48%), Gaps = 90/686 (13%)

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           + QAC N         +HS V K G+         + ++Y KC  L  AR+ F+     +
Sbjct: 10  LFQACNNGRSVSQ---LHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPN 66

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMC-------------------------------- 250
              WNS +  Y +  + +E  RLF  M                                 
Sbjct: 67  VHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIH 126

Query: 251 -----REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ 305
                 +EI   +   + L+  Y++ GQ   A+++ +  +     PD   WT M++G+ Q
Sbjct: 127 GFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQR----PDTVLWTSMVTGYQQ 182

Query: 306 NGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           N    +AL LF +M  +  V+ + VT+ S +SAC  L  +  G  +H L ++  F  D+ 
Sbjct: 183 NNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLP 242

Query: 365 VGNSLINMYSK--CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           + NSL+N+Y+K  CE++ A   +F  + +KDV SW++MIA Y       +A  LF +M E
Sbjct: 243 LVNSLLNLYAKTGCEKIAA--NLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIE 300

Query: 423 SDVPPNVIT-------------------------W----------NVLISGYIQNGNEDE 447
               PN +T                         W            LI  Y++    DE
Sbjct: 301 KRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDE 360

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           AVDLFQR+ K D V     SW +L++GY Q G    ++GVFR M S    P+ V ++ +L
Sbjct: 361 AVDLFQRLPKKDVV-----SWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKIL 415

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
            A + L    +   +HG V+R    S++ V  SLI+ Y+K G++  +  +F GM  +D++
Sbjct: 416 AASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVV 475

Query: 568 TWNSLICGYVLHGFWHAALDLFDQM-KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCS 626
            W+S+I  Y +HG    AL++FDQM K+  ++PN  TFLSI+ A S AG+V+ G K+F  
Sbjct: 476 IWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDR 535

Query: 627 ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNID 686
           +   YQ+ P  EH+  M+DL GR G+L +AM+ I  MPI     +W ALL ACRIH NI+
Sbjct: 536 MVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIE 595

Query: 687 LAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVK 746
           +   A + LF L+P       L+  IYA+ GK ++  ++R   +E   +  FGQ  +EV+
Sbjct: 596 MGEAAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVR 655

Query: 747 NLVYTFVTGGWSESYSDLLYSWLQNV 772
             V++F+        S  +Y  L+ +
Sbjct: 656 GGVHSFLASDRFHPDSQKIYELLRKL 681



 Score =  304 bits (778), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 191/559 (34%), Positives = 286/559 (51%), Gaps = 44/559 (7%)

Query: 349  EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
            + H+     G   D  +      MY     ++AA  VF+ I +   + WN MI G+   G
Sbjct: 738  KTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDG 797

Query: 409  YCGKAYELFIKMQESDVPPN---------------------VITWNVLISGYIQNGNEDE 447
                + EL+ KM E  + P+                     VI  +++  G   +   D 
Sbjct: 798  RFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDA 857

Query: 448  A-VDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
            A VD++ + G  +  +        R+  SW S+I+GY   G  +  LG F  M+SS   P
Sbjct: 858  ALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIP 917

Query: 499  NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
            N V+ILSVL AC  L A  K +  H  V++   E  + V  +++D Y+K G++  +R +F
Sbjct: 918  NRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLF 977

Query: 559  DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
            D  + KD++ W+++I  Y +HG    A+DLFDQM   G++P+  TF  ++ A S +G+++
Sbjct: 978  DETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLE 1037

Query: 619  LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
             GK  F  +TE + I   + +Y+ M+DL GR+G+L EA++ IE+MP+EPD+SIW +LL A
Sbjct: 1038 EGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGA 1097

Query: 679  CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
            CRIH N+DLA    + LF L+P       L+  IYA   +  +  KVRK+          
Sbjct: 1098 CRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQ 1157

Query: 739  GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEE 789
            G   +E  N V+ F  G  S    + LY+ L    E + A   H G           IEE
Sbjct: 1158 GFSLVEYDNQVHKFGVGDRSHPQWEKLYAKL----EELAAPMKHLGYVPLTDFVLHDIEE 1213

Query: 790  EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
            E KE     HSE+LA+AF LI +S    T+RI KN+R+C  CH   K +S + +  I + 
Sbjct: 1214 EAKEAALSYHSERLAIAFGLINTSPGT-TLRITKNLRICGDCHNAIKLISKIVNRVILVR 1272

Query: 850  DSKCLHHFKNGQCSCGDYW 868
            D    H F++G CSCGDYW
Sbjct: 1273 DMHRFHRFEDGVCSCGDYW 1291



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 165/373 (44%), Gaps = 42/373 (11%)

Query: 173  FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISG 232
            F   K  H+ +   G+    R+      +YV   ++  A   FE +       WN MI G
Sbjct: 733  FSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRG 792

Query: 233  YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS------------------------- 267
            +   G    +  L+ KM  + +K     F   ++S                         
Sbjct: 793  FATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSND 852

Query: 268  ----------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
                      Y + G  + A  +  +M       D+ +WT MISG+A NG  S+ L  F 
Sbjct: 853  LFVDAALVDMYAKCGDIEAARLVFDKMA----VRDLVSWTSMISGYAHNGYNSETLGFFD 908

Query: 318  EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
             M   GV+PN V+I S + AC +L AL  G   HS  ++ GF  D+LV  ++++MYSKC 
Sbjct: 909  LMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCG 968

Query: 378  ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
             L+ A  +FD    KD+  W++MIA Y   G+  KA +LF +M ++ V P+ +T+  ++S
Sbjct: 969  SLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLS 1028

Query: 438  GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
                +G  +E    FQ M +   + R  +++  ++    + GQ + A+ +   M      
Sbjct: 1029 ACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVE--- 1085

Query: 498  PNCVTILSVLPAC 510
            P+     S+L AC
Sbjct: 1086 PDASIWGSLLGAC 1098



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 197/431 (45%), Gaps = 28/431 (6%)

Query: 35   NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
            +GR   ++ +   +  +G K  +  +   L++C   + +   + +H  L       D+FV
Sbjct: 796  DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV 855

Query: 94   KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
               L+ +YAKCG ++ AR VF+ M  R+L +W++MI  Y+ +    E +  F LM   G+
Sbjct: 856  DAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGV 915

Query: 154  FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             P+      +L ACGN G    G+  HS VI+ G      V  +++ +Y KCG L  AR 
Sbjct: 916  IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975

Query: 214  FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
             F+    KD V W++MI+ Y   G   +A  LFD+M +  ++   VTF  ++ + +  G 
Sbjct: 976  LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035

Query: 274  CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
             +      + M E   I   +  + CM+    + G+ S+A+DL + M    V P+     
Sbjct: 1036 LEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMP---VEPDASIWG 1092

Query: 333  SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDMIK 390
            S + AC     L +  +I   A  +   D V  G  ++  N+Y+        E+V  M+ 
Sbjct: 1093 SLLGACRIHNNLDLAEKI---ADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMA 1149

Query: 391  DKDVYSWNSMIAGYCQAGYCGKAY-------------ELFIKMQESDVPPNVITWNVLIS 437
             +      + I G+    Y  + +             +L+ K++E   P   + + V ++
Sbjct: 1150 RRGA----NKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGY-VPLT 1204

Query: 438  GYIQNGNEDEA 448
             ++ +  E+EA
Sbjct: 1205 DFVLHDIEEEA 1215



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 167/361 (46%), Gaps = 52/361 (14%)

Query: 88   EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
            + D  + TK   +Y     +D A  VFED+     + W+ MI  ++ D R+   +EL+  
Sbjct: 749  QYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSK 808

Query: 148  MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
            M++ GL PD F FP  L++C    D + GK++H  ++  G S    V  +++ +Y KCG 
Sbjct: 809  MMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGD 868

Query: 208  LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI------------- 254
            +  AR  F+ M  +D V+W SMISGY   G N E    FD M    +             
Sbjct: 869  IEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLA 928

Query: 255  --KLGVV---------------TFNILIRS-----YNQLGQCDVAMEMVKRMESLGITPD 292
               LG +                F+IL+ +     Y++ G  D+A  +    E+ G   D
Sbjct: 929  CGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFD--ETAG--KD 984

Query: 293  VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
            +  W+ MI+ +  +G   +A+DLF +M   GV P+ VT T  +SAC+    L  G     
Sbjct: 985  LVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQ 1044

Query: 353  LAVKMGFTDDVLVGNSL------INMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYC 405
            L      T++ ++   L      +++  +  +L EA + + +M  + D   W S++ G C
Sbjct: 1045 L-----MTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL-GAC 1098

Query: 406  Q 406
            +
Sbjct: 1099 R 1099



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 157/317 (49%), Gaps = 8/317 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           N   NEA+ +   +  +  +    T ++ LQAC  S ++   +K+H        E+D  V
Sbjct: 285 NEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSV 344

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +Y KC C D+A ++F+ + ++++ +W A++  Y+++    + + +F  M+ DG+
Sbjct: 345 STALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGI 404

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD     KIL A    G F+    +H  V++ G +    V  S++ +Y KCG L  A +
Sbjct: 405 QPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVK 464

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-IKLGVVTFNILIRSYNQLG 272
            F+ M  +D V W+SMI+ Y   G   EA  +FD+M +   ++   VTF  ++ + +  G
Sbjct: 465 LFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAG 524

Query: 273 QCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
             +  +++  RM     + PD   +  M+    + G+  +A+D+   M     +P G  +
Sbjct: 525 LVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMP----IPAGPHV 580

Query: 332 TSA-ISACTDLKALAMG 347
             A + AC     + MG
Sbjct: 581 WGALLGACRIHHNIEMG 597



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 169/378 (44%), Gaps = 49/378 (12%)

Query: 258  VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
            +  F I+  S+N++    +  E +         P  F W  MI GFA +GR   +L+L+ 
Sbjct: 755  LTKFAIMYVSFNRIDAASIVFEDIP-------NPCSFLWNVMIRGFATDGRFLSSLELYS 807

Query: 318  EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
            +M   G+ P+      A+ +C  L  L  G  IH   V  G ++D+ V  +L++MY+KC 
Sbjct: 808  KMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCG 867

Query: 378  ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT-WNVLI 436
            ++EAA  VFD +  +D+ SW SMI+GY   GY  +    F  M+ S V PN ++  +VL+
Sbjct: 868  DIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLL 927

Query: 437  ---------------SGYIQNGNE------DEAVDLFQRMGKNDKVK--------RNTAS 467
                           S  IQ G E         +D++ + G  D  +        ++   
Sbjct: 928  ACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVC 987

Query: 468  WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY--LVASNKVK---EI 522
            W+++IA Y   G    A+ +F +M  +   P+ VT   VL AC++  L+   K+      
Sbjct: 988  WSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMT 1047

Query: 523  HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGF 581
               V+ R L +       ++D   ++G +  +  + + M    D   W SL+    +H  
Sbjct: 1048 EEFVIARKLSN----YACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNN 1103

Query: 582  WHAALDLFDQMKSFGLKP 599
               A  + D +  F L P
Sbjct: 1104 LDLAEKIADHL--FHLDP 1119



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 10/202 (4%)

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
           +K+ H  +    L+    ++      Y     I  +  +F+ + +     WN +I G+  
Sbjct: 736 LKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFAT 795

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK-KVFCSITECYQIIPMI 637
            G + ++L+L+ +M   GLKP++  F   +   S AG+ DL + KV      C      +
Sbjct: 796 DGRFLSSLELYSKMMEKGLKPDKFAFPFAL--KSCAGLSDLQRGKVIHQHLVCCGCSNDL 853

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
              +A++D+Y + G +E A    + M +  D   W ++++    H   +   L     FD
Sbjct: 854 FVDAALVDMYAKCGDIEAARLVFDKMAVR-DLVSWTSMISG-YAHNGYNSETLG---FFD 908

Query: 698 L-EPGDVLIQRL-ILQIYAICG 717
           L     V+  R+ IL +   CG
Sbjct: 909 LMRSSGVIPNRVSILSVLLACG 930


>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
 gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
          Length = 679

 Score =  318 bits (815), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 206/687 (29%), Positives = 349/687 (50%), Gaps = 22/687 (3%)

Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
           R  +++L+   + G++  A    +   + D      +I    ++G   E  R+   M R 
Sbjct: 4   RRLSTLLSKRQQLGQIAAAIDALQKRKDADLKECVRVIQSCARLGALAEGRRIHQLMRRV 63

Query: 253 EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
            +   V   N L+  Y + G    ++E  + +       +VF+WT +I+  AQ+GR+ +A
Sbjct: 64  GLGSDVYVSNHLVMMYGKCG----SLEEARLVFEATPAKNVFSWTILITVCAQHGRSQEA 119

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACT-DLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
           L LF EM   G+ P+ V+ T+AI+AC+   + L  G  +H+L  + GF D V+   SL++
Sbjct: 120 LALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDAVVATTSLVS 179

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP--NV 429
           MYSKC  LE + R F+ + + +  SWN+MIA + +     +A     KM    +    +V
Sbjct: 180 MYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACSDV 239

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
           +    L++ Y +     +A   F ++ +      N  +WN LI+ Y Q      A+ +FR
Sbjct: 240 VVGTTLVNMYAKCSGLHDANAAFVKLQEP-----NIITWNVLISAYVQHCCFKEAMELFR 294

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS-LPVMNSLIDTYAKS 548
           +M       + VT +++L AC   VA    + IH CV    L S+  P+ N +++ Y K 
Sbjct: 295 RMLLLGLEMDEVTFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKC 354

Query: 549 GNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
           G++  +  +F  MS  D+I WN++I  Y  HG    AL  ++ M+  G+ P+  T++S+I
Sbjct: 355 GSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVI 414

Query: 609 LAH-SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
            A  + AG+ +     F S+ + + + P   HY  M++  G++G+L +A   I+ MP EP
Sbjct: 415 DASCANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEP 474

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           D   W + L  CR HG++    LA +    ++P        + +I+A  G  ++A ++RK
Sbjct: 475 DVLTWTSFLANCRSHGDMKRGKLAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRK 534

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS-----SH 782
           L  +   R + G+  I++   VY F  G  S   S  ++  L+ + + + +       +H
Sbjct: 535 LMLDRGIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKSAGYDPDMAH 594

Query: 783 SGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMM 841
               +E  +KE +   HSE+LA+AF +I +S  P T +RI+KN+R+C  CH   K  S +
Sbjct: 595 VAHDVEAGQKEPLLFAHSERLAIAFGIISTS--PGTPLRIMKNLRVCGDCHTMTKLTSKI 652

Query: 842 HHCEIFLADSKCLHHFKNGQCSCGDYW 868
              EI + DS   HHFKNG CSC D+W
Sbjct: 653 TRREIIVRDSNRFHHFKNGSCSCKDFW 679



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 247/507 (48%), Gaps = 28/507 (5%)

Query: 61  INLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
           + ++Q+C    ++   R++H  +  V    DV+V   L+ +Y KCG L++AR VFE    
Sbjct: 38  VRVIQSCARLGALAEGRRIHQLMRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPA 97

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKL 178
           +N+++W+ +I   ++  R +E + LF+ M++ G+ P    F   + AC    +F  AG+ 
Sbjct: 98  KNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRA 157

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H+L+ + G         S++++Y KCG L  + R FESM E + V+WN+MI+ + +   
Sbjct: 158 LHALLRRYGFQDAVVATTSLVSMYSKCGSLEESMRTFESMTEPNAVSWNAMIAAFAEHRR 217

Query: 239 NDEAHRLFDKMCREEIKL--GVVTFNILIRSYNQL-GQCDVAMEMVKRMESLGITPDVFT 295
             EA R   KM  E I+    VV    L+  Y +  G  D     VK  E     P++ T
Sbjct: 218 GLEALRTLQKMFLEGIRACSDVVVGTTLVNMYAKCSGLHDANAAFVKLQE-----PNIIT 272

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  +IS + Q+    +A++LF+ M  +G+  + VT  + + AC    AL  G  IH+   
Sbjct: 273 WNVLISAYVQHCCFKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDGRAIHACVR 332

Query: 356 KMGF-TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           +    ++   + N ++NMY KC  L+ AE +F  +   DV +WN+MIA Y Q G+  +A 
Sbjct: 333 EHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEAL 392

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQN-GNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
             +  MQE  V P+  T+  +I     N G  +EA   F  M ++  V+     +  ++ 
Sbjct: 393 RFYELMQEEGVVPDDYTYVSVIDASCANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVE 452

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
              + G+ ++A  + + M    F P+ +T  S L  C            HG + R  L +
Sbjct: 453 SLGKAGRLSDAETLIQCMP---FEPDVLTWTSFLANC----------RSHGDMKRGKLAA 499

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDG 560
              +    ID  A +G +  +R   D 
Sbjct: 500 KGAIR---IDPEASTGYVALARIHADA 523



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 150/311 (48%), Gaps = 13/311 (4%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DV V T L+++YAKC  L DA   F  ++E N+ TW+ +I AY +   ++E +ELF  M+
Sbjct: 238 DVVVGTTLVNMYAKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRML 297

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR-VRNSVLAVYVKCGKL 208
             GL  D+  F  IL AC      E G+ +H+ V +  ++     + N +L +Y KCG L
Sbjct: 298 LLGLEMDEVTFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSL 357

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-NILIRS 267
             A   F+SM + D +AWN+MI+ Y Q G   EA R ++ M  E +     T+ +++  S
Sbjct: 358 QDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDAS 417

Query: 268 YNQLGQCDVAME-MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
               G  + A    V   +  G+ P    + CM+    + GR S A  L + M F    P
Sbjct: 418 CANAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPF---EP 474

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN---SLINMYSKCEELEAAE 383
           + +T TS ++ C     +  G     LA K     D        +L  +++   + + A 
Sbjct: 475 DVLTWTSFLANCRSHGDMKRG----KLAAKGAIRIDPEASTGYVALARIHADAGDFQEAS 530

Query: 384 RVFDMIKDKDV 394
           R+  ++ D+ +
Sbjct: 531 RIRKLMLDRGI 541



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 131/325 (40%), Gaps = 34/325 (10%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVFVKT 95
             EA+ +   +   G ++   T+IN+L AC    ++   R +HA +  + +      ++ 
Sbjct: 286 FKEAMELFRRMLLLGLEMDEVTFINILGACCVPVALEDGRAIHACVREHPLASNHAPLEN 345

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            +L++Y KCG L DA  +F+ M + ++  W+ MI AY +     E +  + LM ++G+ P
Sbjct: 346 VILNMYGKCGSLQDAEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVP 405

Query: 156 DDFLFPKILQA-CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV----KCGKLIW 210
           DD+ +  ++ A C N G  E     H+  + +      R         V    K G+L  
Sbjct: 406 DDYTYVSVIDASCANAGLPEEA---HAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSD 462

Query: 211 ARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCR--EEIKLGVVTFNILIRS 267
           A    + M  E D + W S ++     G+            R   E   G V    L R 
Sbjct: 463 AETLIQCMPFEPDVLTWTSFLANCRSHGDMKRGKLAAKGAIRIDPEASTGYVA---LARI 519

Query: 268 YNQLGQCDVAMEMVKRMESLGITPD-----------VFTWTCMISGFAQNGRTSQALD-- 314
           +   G    A  + K M   GI  +           V+ +T   +G   N R+ +  D  
Sbjct: 520 HADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFT---AGDQSNPRSKEIFDEL 576

Query: 315 --LFKEMSFVGVMPNGVTITSAISA 337
             L KEM   G  P+   +   + A
Sbjct: 577 KRLDKEMKSAGYDPDMAHVAHDVEA 601


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 190/613 (30%), Positives = 314/613 (51%), Gaps = 37/613 (6%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           PD+  W  +I G+ Q       + ++ +M    V PN  T    + AC       +G +I
Sbjct: 63  PDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQI 122

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H    K GF  +V V NSL++MY+K  ++  A  VFD + D+ V SW S+I+GY Q G  
Sbjct: 123 HGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDP 182

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGY--IQNGNEDEAVD-LFQRMGK---------- 457
            +A  +F +M++ +V P+ I    +++ Y  +++  + +++  L  ++G           
Sbjct: 183 MEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISL 242

Query: 458 -----------------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
                            N   K N   WN++I+GY   G    A+ +FR+M +     + 
Sbjct: 243 TTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDS 302

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           +T+ S + A A + +    + + G + +        V   LID YAK G+I  +R +FD 
Sbjct: 303 ITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDR 362

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           ++ KD++ W+ +I GY LHG    A+ L+++MK  G+ PN GTF+ ++ A   +G+V  G
Sbjct: 363 VADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEG 422

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
            ++F  + + + I P  +HYS ++DL GR+G L +A +FI  MPI+P  S+W ALL+AC+
Sbjct: 423 WELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACK 481

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           IH  + L  +A E+LF L+P +      +  +YA          VR +  +       G 
Sbjct: 482 IHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGH 541

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS--SHSGLCIEE---EEKEEI 795
             IE+   + TF  G  S   S  ++  L  + + + A     H    + +   EE EE 
Sbjct: 542 SSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEET 601

Query: 796 SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
              HSE+LA+A+ +I ++    T+RI KN+R C++CH   K +S +   EI + D+K  H
Sbjct: 602 LCHHSERLAVAYGIISTAPGT-TLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFH 660

Query: 856 HFKNGQCSCGDYW 868
           HFK+G CSCGD+W
Sbjct: 661 HFKDGVCSCGDFW 673



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 193/399 (48%), Gaps = 39/399 (9%)

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           F+  K ++     G ++ A + F ++ E ++  W+A+I  Y++       + ++  M   
Sbjct: 35  FLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS 94

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            + P+ F F  +L+ACG       GK +H    K G      V+NS++++Y K G++ +A
Sbjct: 95  QVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYA 154

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL--------------- 256
           R  F+ + ++  V+W S+ISGY Q G+  EA  +F +M +  +K                
Sbjct: 155 RIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNV 214

Query: 257 ----------GVVT-------FNILIR---SYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                     G+VT        +I+I     Y + G  +VA     RME     P++  W
Sbjct: 215 EDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEK----PNLILW 270

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             MISG+A NG   +A+ LF+EM    +  + +T+ SA+ A   + +L +   +     K
Sbjct: 271 NAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISK 330

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
             + DD  V   LI+MY+KC  +  A  VFD + DKDV  W+ MI GY   G+  +A  L
Sbjct: 331 SEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICL 390

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           + +M+++ V PN  T+  L++    +G   E  +LF  M
Sbjct: 391 YNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM 429



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 183/412 (44%), Gaps = 66/412 (16%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T++ +L+AC  ++   + +++H          +VFV+  L+S+YAK G +  AR VF+ +
Sbjct: 102 TFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKL 161

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            +R + +W+++I  Y ++    E + +F  M Q  + PD      ++ A  N  D   GK
Sbjct: 162 HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGK 221

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H LV KLG+     +  S+  +Y K G +  AR FF  M++ + + WN+MISGY   G
Sbjct: 222 SIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNG 281

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA-------------------- 277
             +EA +LF +M  + I++  +T    + +  Q+G  ++A                    
Sbjct: 282 YGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNT 341

Query: 278 --MEMVKRMESLGIT---------PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
             ++M  +  S+ +           DV  W+ MI G+  +G   +A+ L+ EM   GV P
Sbjct: 342 GLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCP 401

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           N  T    ++AC +   +  G E+  L    G            + +  C        V 
Sbjct: 402 NDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPH--------HQHYSC--------VV 445

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           D++                +AGY  +AY+  + M    + P V  W  L+S 
Sbjct: 446 DLLG---------------RAGYLNQAYDFIMSMP---IKPGVSVWGALLSA 479



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 2/200 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           NG   EAI +   + T+  +V   T  + + A     S+ LAR L  +++      D FV
Sbjct: 280 NGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFV 339

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +YAKCG +  AR VF+ + ++++  WS MI  Y      +E + L+  M Q G+
Sbjct: 340 NTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGV 399

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+D  F  +L AC N G  + G  +  L+   G+    +  + V+ +  + G L  A  
Sbjct: 400 CPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYD 459

Query: 214 FFESMDEKDGVA-WNSMISG 232
           F  SM  K GV+ W +++S 
Sbjct: 460 FIMSMPIKPGVSVWGALLSA 479



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 57/120 (47%), Gaps = 1/120 (0%)

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           +M   I+     G++ Y+   F  +S  DI+ WN++I GY       A + ++  M+   
Sbjct: 36  LMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQ 95

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           + PN  TFL ++ A     +  +GK++    T  Y     +   ++++ +Y + G++  A
Sbjct: 96  VHPNCFTFLYVLKACGGTSVEGIGKQIHGQ-TFKYGFGSNVFVQNSLVSMYAKFGQISYA 154


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 196/611 (32%), Positives = 322/611 (52%), Gaps = 55/611 (9%)

Query: 303 FAQNGRTSQALDLFKEMSFVG-VMP---NGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           F++ G + Q+  L +E  FVG V P   N     +A+  C      + G  +H   +K G
Sbjct: 11  FSRRGFSVQSAKLTQE--FVGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRG 68

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              D+   N L+NMY K + L  A ++FD + +++  S+ ++I GY ++    +A ELF+
Sbjct: 69  GCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFV 128

Query: 419 KMQESDVPPNVITW-----------------------------------NVLISGYIQNG 443
           ++   +V PN  T+                                   N L+  Y + G
Sbjct: 129 RLHR-EVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCG 187

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
             + +++LF      +   RN  +WN++I G+ QLG    AL +F  M         VT 
Sbjct: 188 RMENSMELFA-----ESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTY 242

Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
            S L ACA L A     +IH   ++ + +  + V N+LID YAK G+I  +R +FD M+ 
Sbjct: 243 SSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNK 302

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
           +D ++WN++I GY +HG    AL +FD+M+   +KP++ TF+ ++ A + AG++D G+  
Sbjct: 303 QDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAY 362

Query: 624 FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           F S+ + + I P IEHY+ M+ L GR G L++A++ I+++P +P   +W ALL AC IH 
Sbjct: 363 FTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHN 422

Query: 684 NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWI 743
           +I+L  ++ +R+ ++EP D     L+  +YA   + ++   VRK  +    +   G  WI
Sbjct: 423 DIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWI 482

Query: 744 EVKNLVYTFVTGGWSESYSDL---LYSWLQNVPENVTARSSHSG--LCIEEEEKEEISGI 798
           E +  V++F  G  S     +   +  WL    +      +++   L +E+EEKE +  +
Sbjct: 483 ESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWV 542

Query: 799 HSEKLALAFALIGS-SQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF 857
           HSE+LAL+F +I + S +P  IRI+KN+R+CV CH   K +S +   EI + D    HHF
Sbjct: 543 HSERLALSFGIIRTPSGSP--IRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHF 600

Query: 858 KNGQCSCGDYW 868
           + G CSCGDYW
Sbjct: 601 QEGLCSCGDYW 611



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 185/393 (47%), Gaps = 44/393 (11%)

Query: 155 PDDF---LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           P +F    +   LQ C    +   GK +H  ++K G        N +L +YVK   L  A
Sbjct: 33  PSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDA 92

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE------------------ 253
            + F+ M E++ +++ ++I GY +     EA  LF ++ RE                   
Sbjct: 93  SKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVLPNQFTFASVLQACATME 152

Query: 254 ------------IKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
                       IK+G    V   N L+  Y + G+ + +ME+           DV TW 
Sbjct: 153 GLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRN---DV-TWN 208

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            +I G  Q G   +AL LF  M    V    VT +SA+ AC  L AL  G++IHSL VK 
Sbjct: 209 TVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKT 268

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            F  D++V N+LI+MY+KC  ++ A  VFD++  +D  SWN+MI+GY   G   +A  +F
Sbjct: 269 TFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIF 328

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
            KMQE++V P+ +T+  ++S     G  D+    F  M ++  ++     +  ++    +
Sbjct: 329 DKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGR 388

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            G  + A+ +  ++    F P+ +   ++L AC
Sbjct: 389 GGHLDKAVKLIDEIP---FQPSVMVWRALLGAC 418



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 151/322 (46%), Gaps = 33/322 (10%)

Query: 58  NTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           + Y N LQ CI  +     + LH   L     +D+F    LL++Y K   L DA ++F++
Sbjct: 39  HAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDE 98

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
           M ERN  ++  +I  Y+   R+ E +ELF  + ++ + P+ F F  +LQAC        G
Sbjct: 99  MPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE-VLPNQFTFASVLQACATMEGLNLG 157

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
             +H  VIK+G+     V N+++ VY KCG++  +   F     ++ V WN++I G+ Q+
Sbjct: 158 NQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQL 217

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM---------------- 280
           G+ ++A RLF  M    ++   VT++  +R+   L   +  +++                
Sbjct: 218 GDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVT 277

Query: 281 ---------------VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
                           + +  L    D  +W  MISG++ +G   +AL +F +M    V 
Sbjct: 278 NALIDMYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVK 337

Query: 326 PNGVTITSAISACTDLKALAMG 347
           P+ +T    +SAC +   L  G
Sbjct: 338 PDKLTFVGVLSACANAGLLDQG 359


>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 694

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 214/661 (32%), Positives = 338/661 (51%), Gaps = 53/661 (8%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM-VQDGL-- 153
           +LS  A+ G + DAR +F+++  RN  +W+AMI A S   R  +  +LF  M  +DG   
Sbjct: 48  MLSALARHGRIADARRLFDEIPRRNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFSW 107

Query: 154 --------------FPDDFLFPKILQACGNC------GDFEAGKLMHSLVIKLGMSCVRR 193
                            D L       C  C      G  + G+   ++ +   M     
Sbjct: 108 TLMVSCYARAGELGLARDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREMPAPDI 167

Query: 194 VR-NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE 252
           +  NSVL    + G+++ A +FF+ M  +D V+WN M+ GY + G+ D A  LF  +   
Sbjct: 168 ISWNSVLVGLTRNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPSP 227

Query: 253 EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD--VFTWTCMISGFAQNGRTS 310
                VV++  L+  Y + G+   A E+  R+      PD  V  W  M+SG+ +     
Sbjct: 228 N----VVSWVTLLNGYCRAGRIGEARELFDRI------PDRNVAAWNVMLSGYLRLSHME 277

Query: 311 QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI 370
           +A  LF EM       N ++ T+ ISA      L    E   L  KM F D      +L+
Sbjct: 278 EAYKLFTEMPD----KNSISWTTMISALVRGGKL---QEAKDLLDKMPF-DSFAAKTALM 329

Query: 371 NMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
           + Y + + ++ A  +FD ++ +D   WN+MI+GY   G   +A  LF +M   D+    +
Sbjct: 330 HGYLQSKMIDDARLIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQMPNKDM----V 385

Query: 431 TWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
           +WN +I+GY  +G   +AV +F++M +     RNT SWNS+I+G+ Q G    AL  F  
Sbjct: 386 SWNTMIAGYAHDGQMRKAVGIFRKMNQ-----RNTVSWNSVISGFVQNGLCVEALQHFVL 440

Query: 491 MQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGN 550
           M+      +  T    L ACA L A +  ++ H  + R          N+LI  YAK G 
Sbjct: 441 MRRDAKRADWSTYACCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGR 500

Query: 551 IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA 610
           I+ +R +FD M + DI++WN+LI GY  +G    A+ +F +M+   ++P+  TF+ ++ A
Sbjct: 501 ILEARQVFDEMPAPDIVSWNALIDGYASNGHGTEAISVFREMEDNDVRPDEVTFVGVLSA 560

Query: 611 HSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSS 670
            S AG++D G   F S+T+ Y + P+ EHY+ M+DL GRSG+L EA E I+ M ++P++ 
Sbjct: 561 CSHAGLIDEGFDFFNSMTKDYALRPVAEHYACMVDLLGRSGRLSEAFEIIQGMQVQPNAG 620

Query: 671 IWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLER 730
           +W A+L ACR+H N +LA LA E+L++LEP       L+  I A  GK ++A  +R   +
Sbjct: 621 VWGAMLGACRVHKNHELAQLAAEKLYELEPHKTSNYVLLSNITAEAGKWDEAQNMRVFIK 680

Query: 731 E 731
           E
Sbjct: 681 E 681



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 252/539 (46%), Gaps = 55/539 (10%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N  L    + G+L  ARR F+SM  ++ V++N+M+S   + G   +A RLFD++ R    
Sbjct: 15  NQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPRRN-- 72

Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
              V++N +I + +  G+   A ++   M +     D F+WT M+S +A+ G    A D 
Sbjct: 73  --TVSWNAMIAACSDHGRVADARDLFDAMPAR----DGFSWTLMVSCYARAGELGLARDA 126

Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
              M        G   T+  +A     A     +     ++     D++  NS++   ++
Sbjct: 127 LDRMP-------GDKCTACYNAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTR 179

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP-PNVITWNV 434
             E+  A + FD +  +D+ SWN M+ GY +AG    A  LF     + VP PNV++W  
Sbjct: 180 NGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLF-----AGVPSPNVVSWVT 234

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           L++GY + G   EA +LF R+       RN A+WN +++GY +L     A  +F +M   
Sbjct: 235 LLNGYCRAGRIGEARELFDRI-----PDRNVAAWNVMLSGYLRLSHMEEAYKLFTEMPDK 289

Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
               N ++  +++ A   LV   K++E    + +   + S     +L+  Y +S  I  +
Sbjct: 290 ----NSISWTTMISA---LVRGGKLQEAKDLLDKMPFD-SFAAKTALMHGYLQSKMIDDA 341

Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG--TFLSIILAHS 612
           R IFDG+  +D + WN++I GYV  G    A+ LF QM      PN+   ++ ++I  ++
Sbjct: 342 RLIFDGLEVRDAVCWNTMISGYVHCGMLDEAMVLFQQM------PNKDMVSWNTMIAGYA 395

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
             G +     +F  + +   +      ++++I  + ++G   EA++    M  +   + W
Sbjct: 396 HDGQMRKAVGIFRKMNQRNTV-----SWNSVISGFVQNGLCVEALQHFVLMRRDAKRADW 450

Query: 673 EALLTACRIHGNIDLAVLAIERLF------DLEPGDVLIQRLILQIYAICGKPEDALKV 725
                AC +    DLA L + R F          GD      ++  YA CG+  +A +V
Sbjct: 451 STY--ACCLSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQV 507



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 170/395 (43%), Gaps = 66/395 (16%)

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V   N  +   ++  +L AA R+FD +  ++  S+N+M++   + G    A  LF ++  
Sbjct: 11  VYRSNQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPR 70

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
                N ++WN +I+    +G   +A DLF  M   D       SW  +++ Y + G+  
Sbjct: 71  R----NTVSWNAMIAACSDHGRVADARDLFDAMPARDGF-----SWTLMVSCYARAGE-- 119

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG------CVLRRSLESSLP 536
             LG+ R          C        AC   + S   K  HG       +LR      + 
Sbjct: 120 --LGLARDALDRMPGDKCT-------ACYNAMISGYAK--HGRFDDAVALLREMPAPDII 168

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
             NS++    ++G +V +   FD M ++D+++WN ++ GYV  G   +A  LF  + S  
Sbjct: 169 SWNSVLVGLTRNGEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPS-- 226

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT---------------------ECYQIIP 635
             PN  ++++++  +  AG +   +++F  I                      E Y++  
Sbjct: 227 --PNVVSWVTLLNGYCRAGRIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFT 284

Query: 636 MIE-----HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
            +       ++ MI    R GKL+EA + ++ MP   DS   +  L    +HG +   ++
Sbjct: 285 EMPDKNSISWTTMISALVRGGKLQEAKDLLDKMPF--DSFAAKTAL----MHGYLQSKMI 338

Query: 691 AIERL-FD-LEPGDVLIQRLILQIYAICGKPEDAL 723
              RL FD LE  D +    ++  Y  CG  ++A+
Sbjct: 339 DDARLIFDGLEVRDAVCWNTMISGYVHCGMLDEAM 373


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  318 bits (815), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 190/613 (30%), Positives = 314/613 (51%), Gaps = 37/613 (6%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           PD+  W  +I G+ Q       + ++ +M    V PN  T    + AC       +G +I
Sbjct: 48  PDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQI 107

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H    K GF  +V V NSL++MY+K  ++  A  VFD + D+ V SW S+I+GY Q G  
Sbjct: 108 HGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDP 167

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGY--IQNGNEDEAVD-LFQRMGK---------- 457
            +A  +F +M++ +V P+ I    +++ Y  +++  + +++  L  ++G           
Sbjct: 168 MEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISL 227

Query: 458 -----------------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
                            N   K N   WN++I+GY   G    A+ +FR+M +     + 
Sbjct: 228 TTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDS 287

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           +T+ S + A A + +    + + G + +        V   LID YAK G+I  +R +FD 
Sbjct: 288 ITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDR 347

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           ++ KD++ W+ +I GY LHG    A+ L+++MK  G+ PN GTF+ ++ A   +G+V  G
Sbjct: 348 VADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEG 407

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
            ++F  + + + I P  +HYS ++DL GR+G L +A +FI  MPI+P  S+W ALL+AC+
Sbjct: 408 WELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACK 466

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           IH  + L  +A E+LF L+P +      +  +YA          VR +  +       G 
Sbjct: 467 IHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGH 526

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS--SHSGLCIEE---EEKEEI 795
             IE+   + TF  G  S   S  ++  L  + + + A     H    + +   EE EE 
Sbjct: 527 SSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYVPHMESVLHDLNHEEIEET 586

Query: 796 SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
              HSE+LA+A+ +I ++    T+RI KN+R C++CH   K +S +   EI + D+K  H
Sbjct: 587 LCHHSERLAVAYGIISTAPGT-TLRITKNLRACINCHSAIKLISKLVDREIIIRDAKRFH 645

Query: 856 HFKNGQCSCGDYW 868
           HFK+G CSCGD+W
Sbjct: 646 HFKDGVCSCGDFW 658



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 193/399 (48%), Gaps = 39/399 (9%)

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           F+  K ++     G ++ A + F ++ E ++  W+A+I  Y++       + ++  M   
Sbjct: 20  FLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQIS 79

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
            + P+ F F  +L+ACG       GK +H    K G      V+NS++++Y K G++ +A
Sbjct: 80  QVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYA 139

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL--------------- 256
           R  F+ + ++  V+W S+ISGY Q G+  EA  +F +M +  +K                
Sbjct: 140 RIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNV 199

Query: 257 ----------GVVT-------FNILIR---SYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                     G+VT        +I+I     Y + G  +VA     RME     P++  W
Sbjct: 200 EDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEK----PNLILW 255

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             MISG+A NG   +A+ LF+EM    +  + +T+ SA+ A   + +L +   +     K
Sbjct: 256 NAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISK 315

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
             + DD  V   LI+MY+KC  +  A  VFD + DKDV  W+ MI GY   G+  +A  L
Sbjct: 316 SEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICL 375

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           + +M+++ V PN  T+  L++    +G   E  +LF  M
Sbjct: 376 YNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM 414



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 183/412 (44%), Gaps = 66/412 (16%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           T++ +L+AC  ++   + +++H          +VFV+  L+S+YAK G +  AR VF+ +
Sbjct: 87  TFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKL 146

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            +R + +W+++I  Y ++    E + +F  M Q  + PD      ++ A  N  D   GK
Sbjct: 147 HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGK 206

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H LV KLG+     +  S+  +Y K G +  AR FF  M++ + + WN+MISGY   G
Sbjct: 207 SIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNG 266

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA-------------------- 277
             +EA +LF +M  + I++  +T    + +  Q+G  ++A                    
Sbjct: 267 YGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNT 326

Query: 278 --MEMVKRMESLGIT---------PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
             ++M  +  S+ +           DV  W+ MI G+  +G   +A+ L+ EM   GV P
Sbjct: 327 GLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCP 386

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           N  T    ++AC +   +  G E+  L    G            + +  C        V 
Sbjct: 387 NDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPH--------HQHYSC--------VV 430

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           D++                +AGY  +AY+  + M    + P V  W  L+S 
Sbjct: 431 DLLG---------------RAGYLNQAYDFIMSMP---IKPGVSVWGALLSA 464



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 2/200 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
           NG   EAI +   + T+  +V   T  + + A     S+ LAR L  +++      D FV
Sbjct: 265 NGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFV 324

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +YAKCG +  AR VF+ + ++++  WS MI  Y      +E + L+  M Q G+
Sbjct: 325 NTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGV 384

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            P+D  F  +L AC N G  + G  +  L+   G+    +  + V+ +  + G L  A  
Sbjct: 385 CPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYD 444

Query: 214 FFESMDEKDGVA-WNSMISG 232
           F  SM  K GV+ W +++S 
Sbjct: 445 FIMSMPIKPGVSVWGALLSA 464



 Score = 42.0 bits (97), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 57/120 (47%), Gaps = 1/120 (0%)

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           +M   I+     G++ Y+   F  +S  DI+ WN++I GY       A + ++  M+   
Sbjct: 21  LMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQ 80

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           + PN  TFL ++ A     +  +GK++    T  Y     +   ++++ +Y + G++  A
Sbjct: 81  VHPNCFTFLYVLKACGGTSVEGIGKQIHGQ-TFKYGFGSNVFVQNSLVSMYAKFGQISYA 139


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  318 bits (815), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 205/696 (29%), Positives = 330/696 (47%), Gaps = 80/696 (11%)

Query: 129 IGAYSRDQRWREVVELF-FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
           I +  + + + E ++ F FL  + G       +  ++ AC      E GK +H  ++K  
Sbjct: 34  ITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSK 93

Query: 188 MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
                 ++N +L +Y KC  L  A++ F++M E++ V+W S+I+GY Q G+   A   + 
Sbjct: 94  SHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYF 153

Query: 248 KMCREEIKLGVVTFNILIRSYNQLGQCDV------------------------------- 276
           +M +  +     TF  +I++ + LG   +                               
Sbjct: 154 QMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSN 213

Query: 277 ----AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV-MPNGVTI 331
               A+++  RM     T D+ +W  MI+GF+Q G   +AL  FKEM   GV +PN    
Sbjct: 214 LIIDALDVFSRMA----TRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIF 269

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
            S  SAC+ L     G ++H +++K G   DV  G SL +MY+KC  L  A  VF  I  
Sbjct: 270 GSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGR 329

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL---------------I 436
            D+ +WN++IAG+   G   +A   F +M+   + P+ IT   L               +
Sbjct: 330 PDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQV 389

Query: 437 SGYIQNGNED--------------------EAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
            GYI     D                    +A+  F+ M    +   +  SWN+++    
Sbjct: 390 HGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEM----RCNADLVSWNAILTACM 445

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           +  Q      + + M  S   P+ +T+ +VL A A  V+     ++H   L+  L     
Sbjct: 446 RHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCDTS 505

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
           V N LID YAK G++  +  IFD M + D+++W+SLI GY   G+   AL LF  M+   
Sbjct: 506 VTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLD 565

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           +KPN  TF+ ++ A S  G+V+ G K++ ++ + + I P  EH S M+DL  R+G L EA
Sbjct: 566 VKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAGCLNEA 625

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
             FI  M  +PD  +W+ LL AC+ HGN+D+   A E +  ++P +     L+  IYA  
Sbjct: 626 EGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLLCNIYASK 685

Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTF 752
           G  ED  ++R L ++   R   GQ WIEVK+ ++ F
Sbjct: 686 GNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVF 721


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 207/745 (27%), Positives = 361/745 (48%), Gaps = 78/745 (10%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
           N+++  Y+K G L  AR  F+SM ++  V W  +I GY Q  +  EA  LF +M R  I 
Sbjct: 136 NTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGID 195

Query: 256 LGVVTFNILIRSYNQLGQCD----VAMEMVK------------------RMESLGITPDV 293
              V+   L+  + +    +    V   ++K                  +  SLG+   +
Sbjct: 196 PDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQL 255

Query: 294 F---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
           F         T+  +++G+++ G   +A++LF +M  VG  P   T  + ++A   L  +
Sbjct: 256 FNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDI 315

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
             G ++H   VK  F  +V V N+L++ YSK + +  A ++F  + + D  S+N ++  Y
Sbjct: 316 EFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCY 375

Query: 405 CQAGYCGKAYELFIKMQ-----------------------------------ESDVPPNV 429
              G   ++ ELF ++Q                                    +D    +
Sbjct: 376 AWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEI 435

Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
           +  N L+  Y + G   EA  +F     +D   +++  W ++I+ Y Q G   + L +F 
Sbjct: 436 LVGNSLVDMYAKCGEFGEANRIF-----SDLAIQSSVPWTAMISSYVQKGLHEDGLKLFV 490

Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSG 549
           +MQ +    +  T  S++ ACA L +    K++H  ++     S++   ++L+D YAK G
Sbjct: 491 EMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCG 550

Query: 550 NIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIIL 609
           +I  +  +F  M  ++ ++WN+LI  Y  +G     L LF++M   GL+P+  + LSI+ 
Sbjct: 551 SIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILC 610

Query: 610 AHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDS 669
           A S  G+V+ G + F S+T  Y+++P  EHY++ ID+  R G+ +EA + +  MP EPD 
Sbjct: 611 ACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDE 670

Query: 670 SIWEALLTACRIHGNIDLAVLAIERLFDLEP-GDVLIQRLILQIYAICGKPEDALKVRKL 728
            +W ++L +C IH N +LA  A  +LF+++   D      +  IYA  G+ ++  KV+K 
Sbjct: 671 IMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKA 730

Query: 729 ERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTAR-----SSHS 783
            RE   +      W+E+K+  + F     +      +   L  + E +  +     SS +
Sbjct: 731 MRERGVKKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCA 790

Query: 784 GLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHH 843
              ++EE K E    HSE++A+AFALI + +    I ++KN+R C  CH   K +S +  
Sbjct: 791 LHNVDEEVKVESLKYHSERIAIAFALISTPEGS-PILVMKNLRACTDCHAAIKVISKIVR 849

Query: 844 CEIFLADSKCLHHFKNGQCSCGDYW 868
            EI + DS   HHF++G C+C DYW
Sbjct: 850 REITVRDSSRFHHFRDGFCTCRDYW 874



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 244/527 (46%), Gaps = 84/527 (15%)

Query: 58  NTYIN--LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           NTY +  L+++ +    ++ ARKL    + +   ++F    ++  Y K G L +AR +F+
Sbjct: 100 NTYRSNFLVKSFLQRGDLNGARKL---FDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFD 156

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            M +R   TW+ +IG Y+++ ++RE   LF  M + G+ PD      +L           
Sbjct: 157 SMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNE 216

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
            + +HS VIKLG      V NS+L  Y K   L  A + F  + E+D V +N++++GY +
Sbjct: 217 VRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSK 276

Query: 236 IGENDEAHRLFDKMCR--------------------EEIKLG---------------VVT 260
            G N EA  LF KM                      ++I+ G               V  
Sbjct: 277 EGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFV 336

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
            N L+  Y++  +   A ++   M  +    D  ++  +++ +A NGR  ++L+LFKE+ 
Sbjct: 337 ANALLDFYSKHDRVVEASKLFYEMPEV----DGISYNVLVTCYAWNGRVKESLELFKELQ 392

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
           F G         + +S       L +G +IHS  +      ++LVGNSL++MY+KC E  
Sbjct: 393 FTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFG 452

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-------- 432
            A R+F  +  +    W +MI+ Y Q G      +LF++MQ + +  +  T+        
Sbjct: 453 EANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACA 512

Query: 433 -------------NVLISGYIQN--------------GNEDEAVDLFQRMGKNDKVKRNT 465
                        +++ SGYI N              G+  +A+ +FQ M       RN+
Sbjct: 513 SLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMP-----VRNS 567

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
            SWN+LI+ Y Q G  +  L +F +M  S   P+ V++LS+L AC++
Sbjct: 568 VSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSH 614



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 146/579 (25%), Positives = 257/579 (44%), Gaps = 84/579 (14%)

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           +IK G +      N ++  +++ G L  AR+ F+ M  K+  + N+MI GY + G   EA
Sbjct: 92  IIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEA 151

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
             LFD M     +   VT+ +LI  Y Q  Q   A  +   M   GI PD  +   ++SG
Sbjct: 152 RTLFDSM----FQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSG 207

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           F                                   T+  ++    ++HS  +K+G+   
Sbjct: 208 F-----------------------------------TEFDSVNEVRQVHSHVIKLGYDST 232

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           ++V NSL++ Y K   L  A ++F+ I ++D  ++N+++ GY + G+  +A  LF KMQE
Sbjct: 233 LVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQE 292

Query: 423 SDVPPNVIT------------------------------WNVLISG-----YIQNGNEDE 447
               P   T                              WNV ++      Y ++    E
Sbjct: 293 VGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVE 352

Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVL 507
           A  LF  M + D +     S+N L+  Y   G+   +L +F+++Q + F        ++L
Sbjct: 353 ASKLFYEMPEVDGI-----SYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLL 407

Query: 508 PACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDII 567
              A  +  +  ++IH   +     S + V NSL+D YAK G    +  IF  ++ +  +
Sbjct: 408 SIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSV 467

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
            W ++I  YV  G     L LF +M+   +  +  T+ SI+ A +    + LGK++   I
Sbjct: 468 PWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHI 527

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
                I  +    SA++D+Y + G +++A++  ++MP+  +S  W AL++A   +G+ D 
Sbjct: 528 IGSGYISNVFSG-SALVDMYAKCGSIKDALQMFQEMPVR-NSVSWNALISAYAQNGDGDC 585

Query: 688 AVLAIERLF--DLEPGDVLIQRLILQIYAICGKPEDALK 724
            +   E +    L+P  V +   IL   + CG  E+ L+
Sbjct: 586 TLRLFEEMVRSGLQPDSVSLLS-ILCACSHCGLVEEGLQ 623



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 180/390 (46%), Gaps = 46/390 (11%)

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           WTC+I     N     +    K+      + N +      +  T L A    + + +  +
Sbjct: 38  WTCVICLIFTNAGHFGS----KQYELTLSLMNNIIKPCTRNLVTTLTAPKPHLHVDASII 93

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K GF  +    N L+  + +  +L  A ++FD +  K+++S N+MI GY ++G   +A  
Sbjct: 94  KTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNLSEART 153

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           LF  M +       +TW +LI GY QN    EA  LF  MG++                 
Sbjct: 154 LFDSMFQR----TAVTWTMLIGGYAQNNQFREAFGLFIEMGRHG---------------- 193

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
                                 P+ V++ ++L       + N+V+++H  V++   +S+L
Sbjct: 194 --------------------IDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTL 233

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            V NSL+D+Y K+ ++  +  +F+ +  +D +T+N+L+ GY   GF   A++LF +M+  
Sbjct: 234 VVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEV 293

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           G +P   TF +I+ A      ++ G++V   + +C   +  +   +A++D Y +  ++ E
Sbjct: 294 GYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKC-NFVWNVFVANALLDFYSKHDRVVE 352

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
           A +   +MP E D   +  L+T    +G +
Sbjct: 353 ASKLFYEMP-EVDGISYNVLVTCYAWNGRV 381


>gi|357481223|ref|XP_003610897.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512232|gb|AES93855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 774

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 218/690 (31%), Positives = 334/690 (48%), Gaps = 81/690 (11%)

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
           H + +K    +I+  +   N L+  Y + G  D A  +  +M       +  +WT ++SG
Sbjct: 102 HYILNK--HPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPR----RNFVSWTVLVSG 155

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           +AQ G   +   LF  M      PN     S + AC + + +  G+++H+ A+KM     
Sbjct: 156 YAQFGLIRECFALFSGM-LACFRPNEFAFASVLCACEE-QDVKYGLQVHAAALKMSLDFS 213

Query: 363 VLVGNSLINMYSKC---------EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
           V V N+LI MYSKC         +  + A  VF  ++ +++ SWNSMI+G+   G   KA
Sbjct: 214 VYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKA 273

Query: 414 YELFIKMQESDVPPNVITW-------NVLISGYIQNGNEDEAVDLFQ------RMGKNDK 460
             LF  M  + +  N  T        N  +S      N     + FQ      + G   +
Sbjct: 274 IGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISE 333

Query: 461 VKRNTA-----------------------------SWNSLIAGYQQLGQKNNALGVFRKM 491
           V+  TA                             SW ++I+ + +   +  A  +F ++
Sbjct: 334 VEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAERDPEQ-AFLLFCQL 392

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
               F  +  T    L ACAY V      E+H  V+++   +   V N+LI  Y +SG++
Sbjct: 393 HRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSL 452

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             S  +F  M   D+++WNS++  Y +HG    ALDLF QM    + P+  TF++++ A 
Sbjct: 453 ALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQMD---VHPDSATFVALLAAC 509

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
           S AG+V+ G ++F S+TE + I P ++HYS M+DLYGR+GK+ EA E I  MP++PDS I
Sbjct: 510 SHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVI 569

Query: 672 WEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
           W +LL +CR HG  DLA LA ++   L+P + L    +  IY+  G   +A  +RK  R+
Sbjct: 570 WSSLLGSCRKHGEADLAKLAADKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIRKEMRD 629

Query: 732 NTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV----------PENVTARSS 781
           +  R   G  W+EV   V+ F +GG        + S L+ +          PE  +A   
Sbjct: 630 SKVRKRPGLSWVEVGKQVHEFTSGGQHHPKRQAILSRLETLIGQLKEMGYAPEIGSALHD 689

Query: 782 HSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAP---HTIRIVKNIRMCVHCHETAKYV 838
                IE E  E+    HSEK+AL FA++    +P   + I+I+KNIR+CV CH   K  
Sbjct: 690 -----IEVEHIEDQLFHHSEKMALVFAIMNEGISPCAGNVIKIMKNIRICVDCHNFMKLA 744

Query: 839 SMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S +   EI + DS   HHFK   CSC DYW
Sbjct: 745 SKLFQKEIVVRDSNRFHHFKYATCSCNDYW 774



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 145/552 (26%), Positives = 241/552 (43%), Gaps = 68/552 (12%)

Query: 14  SLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSI 73
           S+   ++  R  +T +  L   G L +A+    S+      +    Y  L  AC     I
Sbjct: 39  SIAQPETIARNVNTQIHTLSLQGNLEKAL----SLVYTNPSLTLQDYAFLFHACAQKKYI 94

Query: 74  HLARKLHAF-LNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIG 130
                LH + LN   +I  D+F+   LL++Y KCG LD AR +F+ M  RN  +W+ ++ 
Sbjct: 95  KQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVS 154

Query: 131 AYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSC 190
            Y++    RE   LF  M+     P++F F  +L AC    D + G  +H+  +K+ +  
Sbjct: 155 GYAQFGLIRECFALFSGMLA-CFRPNEFAFASVLCACEE-QDVKYGLQVHAAALKMSLDF 212

Query: 191 VRRVRNSVLAVYVKCGKLIW---------ARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
              V N+++ +Y KC              A   F+SM+ ++ ++WNSMISG+   G  D+
Sbjct: 213 SVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDK 272

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQ-----------------------------LG 272
           A  LF  M    I+    T   ++ S N                              + 
Sbjct: 273 AIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLIS 332

Query: 273 QCDVAMEMVKRMESLG--------------ITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
           + +V   +VK    LG                 D+ +WT +IS FA+     QA  LF +
Sbjct: 333 EVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAERD-PEQAFLLFCQ 391

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           +     + +  T + A+ AC          E+HS  +K GF +D +V N+LI+ Y +   
Sbjct: 392 LHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGS 451

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           L  +E+VF  +   D+ SWNSM+  Y   G    A +LF +M   DV P+  T+  L++ 
Sbjct: 452 LALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAA 508

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
               G  +E   +F  M ++  +  +   ++ ++  Y + G+   A  + RKM      P
Sbjct: 509 CSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMK---P 565

Query: 499 NCVTILSVLPAC 510
           + V   S+L +C
Sbjct: 566 DSVIWSSLLGSC 577



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 130/291 (44%), Gaps = 36/291 (12%)

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
           G A   +I  +   +  ++   N L++ Y + G+ D A  LF +M +     RN  SW  
Sbjct: 97  GMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPR-----RNFVSWTV 151

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK---EIHGCVL 527
           L++GY Q G       +F  M + CF PN     SVL AC        VK   ++H   L
Sbjct: 152 LVSGYAQFGLIRECFALFSGMLA-CFRPNEFAFASVLCACE----EQDVKYGLQVHAAAL 206

Query: 528 RRSLESSLPVMNSLIDTYAK-SGNIVYS--------RTIFDGMSSKDIITWNSLICGYVL 578
           + SL+ S+ V N+LI  Y+K SG    S          +F  M  +++I+WNS+I G+  
Sbjct: 207 KMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQF 266

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSII--LAHSLAGMVDLGKKVFCSITECYQ---- 632
            G    A+ LF  M   G++ N  T L ++  L H ++   D+       +  C+Q    
Sbjct: 267 RGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTH--HLKNCFQLHCL 324

Query: 633 -----IIPMIEHYSAMIDLYGR-SGKLEEAMEFIEDMPIEPDSSIWEALLT 677
                +I  +E  +A++  Y    G + +  +   D   E D   W A+++
Sbjct: 325 TVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIIS 375



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 16/200 (8%)

Query: 57  RNTYINLLQACI------DSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDA 110
           R+T+   L+AC       ++  +H       F N     D  V   L+  Y + G L  +
Sbjct: 401 RHTFSIALKACAYFVTEKNATEVHSQVMKQGFHN-----DTVVSNALIHAYGRSGSLALS 455

Query: 111 REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
            +VF +M   +L +W++M+ +Y+   R ++ ++LF    Q  + PD   F  +L AC + 
Sbjct: 456 EQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLF---KQMDVHPDSATFVALLAACSHA 512

Query: 171 GDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK-DGVAWNS 228
           G  E G ++ +S+    G++      + ++ +Y + GK+  A      M  K D V W+S
Sbjct: 513 GLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKPDSVIWSS 572

Query: 229 MISGYFQIGENDEAHRLFDK 248
           ++    + GE D A    DK
Sbjct: 573 LLGSCRKHGEADLAKLAADK 592



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 506 VLPACAYLVASNKVKEIHGCVLRR--SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
           +  ACA      +   +H  +L +   +++ + + N+L++ Y K G++ Y+R +FD M  
Sbjct: 84  LFHACAQKKYIKQGMALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPR 143

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA 610
           ++ ++W  L+ GY   G       LF  M +   +PN   F S++ A
Sbjct: 144 RNFVSWTVLVSGYAQFGLIRECFALFSGMLA-CFRPNEFAFASVLCA 189


>gi|147780302|emb|CAN70248.1| hypothetical protein VITISV_032008 [Vitis vinifera]
          Length = 679

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 189/518 (36%), Positives = 295/518 (56%), Gaps = 46/518 (8%)

Query: 371 NMYSKCEE----LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           ++YSK E+    L +  +VF+M+  +D+ SWN++I+G  Q G    A  +  +M  +D+ 
Sbjct: 134 DVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLR 193

Query: 427 PNVITW-----------NVL----ISGY-IQNGNEDEA------VDLFQRMGKNDKVKR- 463
           P+  T            N+L    I GY I+NG + +       +D++ +  + D   R 
Sbjct: 194 PDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRV 253

Query: 464 -------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
                  +  SWNS+IAG  Q G  +  L  F++M  +   PN V+  S++PACA+L   
Sbjct: 254 FYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTL 313

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
           +  K++HG ++R   + ++ + ++L+D YAK GNI  +R IFD M   D+++W ++I GY
Sbjct: 314 HLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGY 373

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
            LHG  + A+ LF +M+  G+KPN   F++++ A S AG+VD   K F S+T+ Y+IIP 
Sbjct: 374 ALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPG 433

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF 696
           +EHY+A+ DL GR G+LEEA EFI DM IEP  S+W  LL ACR+H NI+LA    ++LF
Sbjct: 434 LEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLF 493

Query: 697 DLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG 756
            ++P ++    L+  IY+  G+ +DA K+R   R+   +      WIE+KN V+ FV G 
Sbjct: 494 TVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGD 553

Query: 757 WSESYSDLLYSWLQNVPENV--------TARSSHSGLCIEEEEKEEISGIHSEKLALAFA 808
            S  Y D +   L+ + E +        T    H    +EEE+K  +   HSE+LA+ F 
Sbjct: 554 KSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHD---VEEEQKRYLLCSHSERLAITFG 610

Query: 809 LIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
           +I S+ A  TIR+ KN+R+CV CH   K++S +   EI
Sbjct: 611 II-STPAGTTIRVTKNLRVCVDCHTATKFISKIVGREI 647



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 190/421 (45%), Gaps = 67/421 (15%)

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           M+  G +PD  +FP +L++C    D   G+ +H  +I+LGM       N+++ +Y K   
Sbjct: 1   MLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWS 60

Query: 208 LI--WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV------ 259
           L     +RF +S           M+ G  +  E  +     D  C  + ++  +      
Sbjct: 61  LEEGGVQRFCDS----------KMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDL 110

Query: 260 --------TFNILIRSYNQLGQCDVAMEMVKRMESLG-------ITP--DVFTWTCMISG 302
                     N   + +++    DV  +  K    LG       + P  D+ +W  +ISG
Sbjct: 111 NQMSNILYQVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISG 170

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
            AQNG    AL + +EM    + P+  T++S +    +   L  G EIH  A++ G+  D
Sbjct: 171 NAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDAD 230

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           V +G+SLI+MY+KC  ++ + RVF M+   D  SWNS+IAG  Q G   +  + F +M  
Sbjct: 231 VFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLI 290

Query: 423 SDVPPNVITWNVLIS---------------GYIQNGNED-------EAVDLFQRMGKNDK 460
           + + PN ++++ ++                GYI     D         VD++ + G N +
Sbjct: 291 AKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCG-NIR 349

Query: 461 VKR---------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
             R         +  SW ++I GY   G   +A+ +F++M+     PN V  ++VL AC+
Sbjct: 350 TARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACS 409

Query: 512 Y 512
           +
Sbjct: 410 H 410



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 192/398 (48%), Gaps = 38/398 (9%)

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE-- 380
           G  P+     S + +CT +K L  G  +H   +++G   D+   N+L+NMYSK   LE  
Sbjct: 5   GKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEG 64

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQA---GYCGKAYELFIKMQE------SDVPPNVIT 431
             +R  D          + M+ G  +    G C  +++L  ++ E       +   N ++
Sbjct: 65  GVQRFCD----------SKMLGGIPEPREIGKCSNSHDLPCELDERVAGIDQNGDLNQMS 114

Query: 432 WNVL--ISGYIQNGNEDEAVDLFQR-------MGKNDKV-----KRNTASWNSLIAGYQQ 477
            N+L  ++ Y +  +E +  D++ +       +G   KV     KR+  SWN++I+G  Q
Sbjct: 115 -NILYQVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQ 173

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
            G   +AL + R+M ++   P+  T+ SVLP  A  V   K KEIHG  +R   ++ + +
Sbjct: 174 NGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFI 233

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
            +SLID YAK   +  S  +F  +   D I+WNS+I G V +G +   L  F QM    +
Sbjct: 234 GSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKI 293

Query: 598 KPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
           KPN  +F SI+ A +    + LGK++   I    +    +   SA++D+Y + G +  A 
Sbjct: 294 KPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRS-RFDGNVFIASALVDMYAKCGNIRTAR 352

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
              + M +  D   W A++    +HG+   A+   +R+
Sbjct: 353 WIFDKMELY-DMVSWTAMIMGYALHGHAYDAISLFKRM 389



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 131/281 (46%), Gaps = 31/281 (11%)

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           R+ FE M ++D V+WN++ISG  Q G +++A  +  +M   +++    T + ++  + + 
Sbjct: 150 RKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEY 209

Query: 272 GQCDVAMEMVKRMESLGITPDVF-------------------------------TWTCMI 300
                  E+       G   DVF                               +W  +I
Sbjct: 210 VNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSII 269

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +G  QNG   + L  F++M    + PN V+ +S + AC  L  L +G ++H   ++  F 
Sbjct: 270 AGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFD 329

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            +V + ++L++MY+KC  +  A  +FD ++  D+ SW +MI GY   G+   A  LF +M
Sbjct: 330 GNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRM 389

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
           +   V PN + +  +++     G  DEA   F  M ++ ++
Sbjct: 390 EVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRI 430



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 160/337 (47%), Gaps = 20/337 (5%)

Query: 60  YINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           Y+NLL+           +++H + +    + DVF+ + L+ +YAKC  +DD+  VF  + 
Sbjct: 209 YVNLLKG----------KEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLP 258

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
           + +  +W+++I    ++  + E ++ F  M+   + P+   F  I+ AC +      GK 
Sbjct: 259 QHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQ 318

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H  +I+        + ++++ +Y KCG +  AR  F+ M+  D V+W +MI GY   G 
Sbjct: 319 LHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGH 378

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWT 297
             +A  LF +M  E +K   V F  ++ + +  G  D A +    M +   I P +  + 
Sbjct: 379 AYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYA 438

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            +     + GR  +A +   +M    + P G   ++ ++AC   K + +  ++   + K+
Sbjct: 439 AVADLLGRVGRLEEAYEFISDMH---IEPTGSVWSTLLAACRVHKNIELAEKV---SKKL 492

Query: 358 GFTDDVLVGNSLI--NMYSKCEELEAAERVFDMIKDK 392
              D   +G  ++  N+YS     + A ++   ++DK
Sbjct: 493 FTVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDK 529



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 108/466 (23%), Positives = 185/466 (39%), Gaps = 89/466 (19%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DV+ K +  S Y     L   R+VFE M +R++ +W+ +I   +++    + + +   M 
Sbjct: 134 DVYSKKEKESYY-----LGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMG 188

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
              L PD F    +L       +   GK +H   I+ G      + +S++ +Y KC ++ 
Sbjct: 189 NADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVD 248

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------- 261
            + R F  + + DG++WNS+I+G  Q G  DE  + F +M   +IK   V+F        
Sbjct: 249 DSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACA 308

Query: 262 ----------------------NILIRS-----YNQLGQCDVAMEMVKRMESLGITPDVF 294
                                 N+ I S     Y + G    A  +  +ME      D+ 
Sbjct: 309 HLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELY----DMV 364

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +WT MI G+A +G    A+ LFK M   GV PN V   + ++AC+               
Sbjct: 365 SWTAMIMGYALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACS--------------- 409

Query: 355 VKMGFTDDVL-VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
              G  D+     NS+   Y     LE    V D++                + G   +A
Sbjct: 410 -HAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLG---------------RVGRLEEA 453

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
           YE    M    + P    W+ L++    + N + A  + +++   D   +N  ++  L  
Sbjct: 454 YEFISDMH---IEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVD--PQNIGAYVLLSN 508

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
            Y   G+  +A  +   M+           +   PAC+++   NKV
Sbjct: 509 IYSAAGRWKDARKLRIAMRDKG--------MKKKPACSWIEIKNKV 546


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 219/742 (29%), Positives = 359/742 (48%), Gaps = 83/742 (11%)

Query: 194 VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE 253
            RN    V +  G +I A  + E+        +N+++  Y  +  +  A R+FD++ +  
Sbjct: 18  ARNQSRYVKMIHGNIIRALPYPETF------LYNNIVHAYALMKSSTYARRVFDRIPQPN 71

Query: 254 IKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQAL 313
           +     ++N L+ +Y++ G   +  EM    E L    D  TW  +I G++ +G    A+
Sbjct: 72  L----FSWNNLLLAYSKAG---LISEMESTFEKLP-DRDGVTWNVLIEGYSLSGLVGAAV 123

Query: 314 DLFKEM--SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
             +  M   F   +   VT+ + +   +    +++G +IH   +K+GF   +LVG+ L+ 
Sbjct: 124 KAYNTMMRDFSANLTR-VTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLY 182

Query: 372 MYSKCEELEAAERVF---------------------DMIKD---------KDVYSWNSMI 401
           MY+    +  A++VF                      MI+D         KD  SW +MI
Sbjct: 183 MYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMI 242

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-----GYIQNGNEDEA-------- 448
            G  Q G   +A E F +M+   +  +   +  ++      G I  G +  A        
Sbjct: 243 KGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQ 302

Query: 449 ---------VDLFQR-----MGKN--DKVK-RNTASWNSLIAGYQQLGQKNNALGVFRKM 491
                    +D++ +       K   D++K +N  SW +++ GY Q G+   A+ +F  M
Sbjct: 303 DHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM 362

Query: 492 QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
           Q S   P+  T+   + ACA + +  +  + HG  +   L   + V NSL+  Y K G+I
Sbjct: 363 QRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDI 422

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             S  +F+ M+ +D ++W +++  Y   G     + LFD+M   GLKP+  T   +I A 
Sbjct: 423 DDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISAC 482

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
           S AG+V+ G++ F  +T  Y I+P I HYS MIDL+ RSG+LEEAM FI  MP  PD+  
Sbjct: 483 SRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIG 542

Query: 672 WEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
           W  LL+ACR  GN+++   A E L +L+P       L+  IYA  GK +   ++R+  RE
Sbjct: 543 WTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMRE 602

Query: 732 NTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLC 786
              +   GQ WI+ K  +++F     S  Y D +Y+ L+ +   +        +S     
Sbjct: 603 KNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHD 662

Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
           +EE  K ++   HSE+LA+AF LI        IR+ KN+R+CV CH   K++S +   EI
Sbjct: 663 VEEAVKVKMLNYHSERLAIAFGLIFVPSG-QPIRVGKNLRVCVDCHNATKHISSVTGREI 721

Query: 847 FLADSKCLHHFKNGQCSCGDYW 868
            + D+   H FK+G CSCGD+W
Sbjct: 722 LVRDAVRFHRFKDGTCSCGDFW 743



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 166/318 (52%), Gaps = 5/318 (1%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID- 90
           L  NG   EAI     +  QG K+ +  + ++L AC    +I+  +++HA +      D 
Sbjct: 245 LAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           ++V + L+ +Y KC CL  A+ VF+ M+++N+ +W+AM+  Y +  R  E V++F  M +
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQR 364

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G+ PD +   + + AC N    E G   H   I  G+     V NS++ +Y KCG +  
Sbjct: 365 SGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDD 424

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           + R F  M+ +D V+W +M+S Y Q G   E  +LFDKM +  +K   VT   +I + ++
Sbjct: 425 STRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSR 484

Query: 271 LGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G  +      K M S  GI P +  ++CMI  F+++GR  +A+     M F    P+ +
Sbjct: 485 AGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFP---PDAI 541

Query: 330 TITSAISACTDLKALAMG 347
             T+ +SAC +   L +G
Sbjct: 542 GWTTLLSACRNKGNLEIG 559



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 137/554 (24%), Positives = 243/554 (43%), Gaps = 90/554 (16%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
           Y N++ A     S   AR++    + + + ++F    LL  Y+K G + +    FE + +
Sbjct: 44  YNNIVHAYALMKSSTYARRV---FDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPD 100

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL---FPKILQACGNCGDFEAG 176
           R+  TW+ +I  YS        V+ +  M++D  F  +        +L+   + G    G
Sbjct: 101 RDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD--FSANLTRVTLMTMLKLSSSNGHVSLG 158

Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
           K +H  VIKLG      V + +L +Y   G +  A++ F  +D+++ V +NS++ G    
Sbjct: 159 KQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLAC 218

Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
           G  ++A +LF  M ++      V++  +I+   Q G    A+E  + M+  G+  D +  
Sbjct: 219 GMIEDALQLFRGMEKDS-----VSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQY-- 271

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
                                   F  V+P          AC  L A+  G +IH+  ++
Sbjct: 272 -----------------------PFGSVLP----------ACGGLGAINEGKQIHACIIR 298

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
             F D + VG++LI+MY KC+ L  A+ VFD +K K+V SW +M+ GY Q G   +A ++
Sbjct: 299 TNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKI 358

Query: 417 FIKMQESDVPPN-----------------------------------VITWNVLISGYIQ 441
           F+ MQ S + P+                                   V   N L++ Y +
Sbjct: 359 FLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGK 418

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
            G+ D++  LF  M   D V     SW ++++ Y Q G+    + +F KM      P+ V
Sbjct: 419 CGDIDDSTRLFNEMNVRDAV-----SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGV 473

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
           T+  V+ AC+      K +     +     +  S+   + +ID +++SG +  +    +G
Sbjct: 474 TLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFING 533

Query: 561 MS-SKDIITWNSLI 573
           M    D I W +L+
Sbjct: 534 MPFPPDAIGWTTLL 547



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 209/487 (42%), Gaps = 79/487 (16%)

Query: 53  AKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAR 111
           A + R T + +L+    +  + L +++H   + L  E  + V + LL +YA  GC+ DA+
Sbjct: 135 ANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAK 194

Query: 112 EVFEDMRERN--LY----------------------------TWSAMIGAYSRDQRWREV 141
           +VF  + +RN  +Y                            +W+AMI   +++   +E 
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEA 254

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
           +E F  M   GL  D + F  +L ACG  G    GK +H+ +I+        V ++++ +
Sbjct: 255 IECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDM 314

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI-----KL 256
           Y KC  L +A+  F+ M +K+ V+W +M+ GY Q G  +EA ++F  M R  I      L
Sbjct: 315 YCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374

Query: 257 G------------------------------VVTFNILIRSYNQLGQCDVAMEMVKRMES 286
           G                              V   N L+  Y + G  D +  +   M  
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMN- 433

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
                D  +WT M+S +AQ GR  + + LF +M   G+ P+GVT+T  ISAC+    +  
Sbjct: 434 ---VRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEK 490

Query: 347 GMEIHSLAV-KMGFTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAGY 404
           G     L   + G    +   + +I+++S+   LE A R  + M    D   W ++++  
Sbjct: 491 GQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC 550

Query: 405 CQAG--YCGK-AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
              G    GK A E  I++     P +   + +L S Y   G  D    L + M + +  
Sbjct: 551 RNKGNLEIGKWAAESLIELD----PHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVK 606

Query: 462 KRNTASW 468
           K    SW
Sbjct: 607 KEPGQSW 613


>gi|356518834|ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Glycine max]
          Length = 875

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 228/861 (26%), Positives = 388/861 (45%), Gaps = 125/861 (14%)

Query: 32  LCGNGRLNEAITVLDSI--ATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI 89
           LC   + +EA+++        +  K        +L++C    + +L R LH ++      
Sbjct: 16  LCLEAKHSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPNLGRTLHGYVVKQGHG 75

Query: 90  DVFVKTK-LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
              V  K LL++YAKCG L +  ++F+ +   +   W+ ++  +S   +    V   F M
Sbjct: 76  SCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFSGSNKCDADVMRVFRM 135

Query: 149 VQDG--LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           +       P+      +L  C   GD +AGK +H  VIK G        N+++++Y KCG
Sbjct: 136 MHSSREALPNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQDTLGGNALVSMYAKCG 195

Query: 207 KLIW-ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR-------------- 251
            +   A   F+++  KD V+WN+MI+G  +    ++A  LF  M +              
Sbjct: 196 LVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSMVKGPTRPNYATVANIL 255

Query: 252 -------------------------EEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
                                     E+   V   N LI  Y ++GQ   A  +   M++
Sbjct: 256 PVCASFDKSVAYYCGRQIHSYVLQWPELSADVSVCNALISLYLKVGQMREAEALFWTMDA 315

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALA 345
                D+ TW   I+G+  NG   +AL LF  + S   ++P+ VT+ S + AC  LK L 
Sbjct: 316 ----RDLVTWNAFIAGYTSNGEWLKALHLFGNLASLETLLPDSVTMVSILPACAQLKNLK 371

Query: 346 MGMEIHSLAVKMGFT-DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
           +G +IH+   +  F   D  VGN+L++ Y+KC   E A   F MI  KD+ SWNS+   +
Sbjct: 372 VGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYTEEAYHTFSMISMKDLISWNSIFDAF 431

Query: 405 CQAGYCGKAYELFIKMQESDVPPNVIT--------------------------------- 431
            +  +  +   L   M +  + P+ +T                                 
Sbjct: 432 GEKRHHSRFLSLLHCMLKLRIRPDSVTILAIIRLCASLLRVEKVKEIHSYSIRTGSLLSN 491

Query: 432 -----WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN--- 483
                 N ++  Y + GN + A  +FQ + +    KRN  + NSLI+GY  LG  ++   
Sbjct: 492 TAPTVGNAILDAYSKCGNMEYANKMFQNLSE----KRNLVTCNSLISGYVGLGSHHDANM 547

Query: 484 ----------------------------ALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
                                       ALG+  ++Q+    P+ VTI+S+LP C  + +
Sbjct: 548 IFSGMSETDLTTWNLMVRVYAENDCPEQALGLCHELQARGMKPDTVTIMSLLPVCTQMAS 607

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
            + + +  G ++R   +  L +  +L+D YAK G I  +  IF   + KD++ + ++I G
Sbjct: 608 VHLLSQCQGYIIRSCFK-DLHLEAALLDAYAKCGIIGRAYKIFQLSAEKDLVMFTAMIGG 666

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
           Y +HG    AL +F  M   G++P+   F SI+ A S AG VD G K+F SI + + + P
Sbjct: 667 YAMHGMSEEALWIFSHMLKLGIQPDHIIFTSILSACSHAGRVDEGLKIFYSIEKLHGMKP 726

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
            +E Y+ ++DL  R G++ EA   +  +PIE ++++W  LL AC+ H  ++L  +   +L
Sbjct: 727 TVEQYACVVDLLARGGRISEAYSLVTSLPIEANANLWGTLLGACKTHHEVELGRIVANQL 786

Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
           F +E  D+    ++  +YA   + +  ++VR++ R    +   G  WIEV+     FV G
Sbjct: 787 FKIEANDIGNYIVLSNLYAADARWDGVMEVRRMMRNKDLKKPAGCSWIEVERTNNIFVAG 846

Query: 756 GWSESYSDLLYSWLQNVPENV 776
             S     ++YS LQ +   V
Sbjct: 847 DCSHPQRSIIYSTLQTLDRQV 867



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 184/734 (25%), Positives = 300/734 (40%), Gaps = 158/734 (21%)

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFF--LMVQDGLFPDDFLFPKILQACGNCGDFE 174
           M  R+  TW ++I +   + +  E + LF   L   +   PD  +   IL++C       
Sbjct: 1   MLGRDFKTWGSVIWSLCLEAKHSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPN 60

Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
            G+ +H  V+K G          +L +Y KCG L+   + F+ +   D V WN ++SG+ 
Sbjct: 61  LGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFS 120

Query: 235 QIGEND-EAHRLFDKM--CREEIKLGVVTFNILIRSYNQLGQCDVAM------------- 278
              + D +  R+F  M   RE +    VT   ++    +LG  D                
Sbjct: 121 GSNKCDADVMRVFRMMHSSREALP-NSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQ 179

Query: 279 ------EMVKRMESLGITP-------------DVFTWTCMISGFAQNGRTSQALDLFKEM 319
                  +V      G+               DV +W  MI+G A+N     A  LF  M
Sbjct: 180 DTLGGNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSM 239

Query: 320 SFVGVMPNGVTITSAISACTDL-KALAM--GMEIHSLAVKMG-FTDDVLVGNSLINMYSK 375
                 PN  T+ + +  C    K++A   G +IHS  ++    + DV V N+LI++Y K
Sbjct: 240 VKGPTRPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADVSVCNALISLYLK 299

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ--ESDVPPNVI--- 430
             ++  AE +F  +  +D+ +WN+ IAGY   G   KA  LF  +   E+ +P +V    
Sbjct: 300 VGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLASLETLLPDSVTMVS 359

Query: 431 --------------------------------TWNVLISGYIQNGNEDEAVDLFQRMGKN 458
                                             N L+S Y + G  +EA   F  +   
Sbjct: 360 ILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYTEEAYHTFSMISMK 419

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
           D +     SWNS+   + +    +  L +   M      P+ VTIL+++  CA L+   K
Sbjct: 420 DLI-----SWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSVTILAIIRLCASLLRVEK 474

Query: 519 VKEIHGCVLRRS--LESSLP-VMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLIC 574
           VKEIH   +R    L ++ P V N+++D Y+K GN+ Y+  +F  +S K +++T NSLI 
Sbjct: 475 VKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQNLSEKRNLVTCNSLIS 534

Query: 575 GYVLHGFWH-------------------------------AALDLFDQMKSFGLKPNRGT 603
           GYV  G  H                                AL L  ++++ G+KP+  T
Sbjct: 535 GYVGLGSHHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALGLCHELQARGMKPDTVT 594

Query: 604 FLSIILA-------------------------HSLAGMVDLGKKVFCSIT-ECYQIIPM- 636
            +S++                           H  A ++D   K  C I    Y+I  + 
Sbjct: 595 IMSLLPVCTQMASVHLLSQCQGYIIRSCFKDLHLEAALLDAYAK--CGIIGRAYKIFQLS 652

Query: 637 ----IEHYSAMIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLTACRIHGNIDLAV 689
               +  ++AMI  Y   G  EEA+     M    I+PD  I+ ++L+AC   G +D  +
Sbjct: 653 AEKDLVMFTAMIGGYAMHGMSEEALWIFSHMLKLGIQPDHIIFTSILSACSHAGRVDEGL 712

Query: 690 ---LAIERLFDLEP 700
               +IE+L  ++P
Sbjct: 713 KIFYSIEKLHGMKP 726



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 207/489 (42%), Gaps = 47/489 (9%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKE--MSFVGVMPNGVTITSAISACTDLKALAMGME 349
           D  TW  +I       + S+AL LF           P+   + + + +C+ L A  +G  
Sbjct: 5   DFKTWGSVIWSLCLEAKHSEALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPNLGRT 64

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H   VK G     +    L+NMY+KC  L    ++FD +   D   WN +++G+  +  
Sbjct: 65  LHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQLSHCDPVVWNIVLSGFSGSNK 124

Query: 410 CGKAYELFIKMQESD---VPPNVITWNVL--------------ISGYIQNGNEDE----- 447
           C        +M  S    +P +V    VL              + GY+     D+     
Sbjct: 125 CDADVMRVFRMMHSSREALPNSVTVATVLPVCARLGDLDAGKCVHGYVIKSGFDQDTLGG 184

Query: 448 --AVDLFQRMGK---------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
              V ++ + G          ++   ++  SWN++IAG  +     +A  +F  M     
Sbjct: 185 NALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSMVKGPT 244

Query: 497 YPNCVTILSVLPACAYL---VASNKVKEIHGCVLR-RSLESSLPVMNSLIDTYAKSGNIV 552
            PN  T+ ++LP CA     VA    ++IH  VL+   L + + V N+LI  Y K G + 
Sbjct: 245 RPNYATVANILPVCASFDKSVAYYCGRQIHSYVLQWPELSADVSVCNALISLYLKVGQMR 304

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF-GLKPNRGTFLSIILAH 611
            +  +F  M ++D++TWN+ I GY  +G W  AL LF  + S   L P+  T +SI+ A 
Sbjct: 305 EAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLASLETLLPDSVTMVSILPAC 364

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
           +    + +GK++   I     +       +A++  Y + G  EEA      + ++ D   
Sbjct: 365 AQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYTEEAYHTFSMISMK-DLIS 423

Query: 672 WEALLTAC--RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLE 729
           W ++  A   + H +  L++L       + P  V     IL I  +C       KV+++ 
Sbjct: 424 WNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSV----TILAIIRLCASLLRVEKVKEIH 479

Query: 730 RENTRRNSF 738
             + R  S 
Sbjct: 480 SYSIRTGSL 488


>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 833

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 217/801 (27%), Positives = 399/801 (49%), Gaps = 96/801 (11%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           R TY +LL+AC   +++   + +H+  +      D ++ + L+++Y KCG   DA +VF+
Sbjct: 53  RFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFD 112

Query: 116 DMRER-----NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
            + +      ++  W+++I  Y R  +  E       MVQ G           +Q+ G  
Sbjct: 113 QLPKSGVSVDDVTIWNSIIDGYFRFGQLEEG------MVQFGR----------MQSSG-- 154

Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM-DEKDGVAWNSM 229
             ++ GK +HS +++  ++    +  +++  Y KCG+   AR  F+ + D  + VAWN M
Sbjct: 155 --YKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVM 212

Query: 230 ISGYFQIG--ENDEAHRLFDKMCREEIKLGVVTFNILIR--------SYNQLGQCDVAM- 278
           I G+ + G  EN   + L  K   E +K+   +F   +         S+ +   CD    
Sbjct: 213 IGGFGENGLWENSLEYYLLAKT--ENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKV 270

Query: 279 -------------------EMVKRMESL-GITPD--VFTWTCMISGFAQNGRTSQALDLF 316
                              +M++  E +    PD  +  W  +IS +  NG    AL ++
Sbjct: 271 GFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIY 330

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
           K+M    V+ +  TI + +++ +      +G  IH+  VK      + + ++L+ MYSK 
Sbjct: 331 KQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKF 390

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
            +   A  +F  +K++DV +W S+I+G+CQ     +A + F  M+   V P+      +I
Sbjct: 391 GDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASII 450

Query: 437 SG----------------YIQNGNE------DEAVDLFQRMGKNDKVK--------RNTA 466
           S                  I++G +         +D++ + G  ++          +N  
Sbjct: 451 SACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLV 510

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           +WNS+I+ Y +    + ++ +F ++  +  YP+ V+  SVL A + + A  K K +HG +
Sbjct: 511 AWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYL 570

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           +R  +   L V N+LID Y K G + Y++ IF+ +S K+++ WNS+I GY  HG    A+
Sbjct: 571 VRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAI 630

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
           +LFD+M+S G+KP+  TFLS++ + + +G+++ G  +F  +   + I P +EHY  ++DL
Sbjct: 631 ELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDL 690

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP--GDVL 704
           YGR+G L +A  F+++MP+EPD SIW +LL +C+IH N++L  +   +L ++EP  G   
Sbjct: 691 YGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSKGSNY 750

Query: 705 IQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDL 764
           +Q  +L +Y      +    +R   +E   + + G  WIEV+N V  F +G  S   +  
Sbjct: 751 VQ--LLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSGDCSSPITTE 808

Query: 765 LYSWLQNVPENVTARSSHSGL 785
           +Y  L ++  N+  + +  G+
Sbjct: 809 IYDTLSSLKRNMIKKGAKHGI 829



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 169/634 (26%), Positives = 301/634 (47%), Gaps = 79/634 (12%)

Query: 139 REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV 198
           R+ +E   L  +  ++   F +P +L+AC +  + + GK +HS +I  G+   + + +S+
Sbjct: 35  RQYIEALKLYTKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSL 94

Query: 199 LAVYVKCGKLIWARRFFESMDEKDGVA------WNSMISGYFQIGENDEAHRLFDKMCRE 252
           + +YVKCG    A + F+ +  K GV+      WNS+I GYF+ G+ +E    F +M   
Sbjct: 95  INIYVKCGTFTDAVKVFDQL-PKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSS 153

Query: 253 EIKLG----------VVTFN-----ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
             K G          ++ F+      LI +Y + G+   A  + K+++      ++  W 
Sbjct: 154 GYKEGKQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKD---RSNIVAWN 210

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
            MI GF +NG    +L+ +       V     + T  +SAC   + ++ G ++H  A+K+
Sbjct: 211 VMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKV 270

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
           GF DD  V  SL+ MY KC+ +E+AE+VF+ + DK++  WN++I+ Y   GY   A  ++
Sbjct: 271 GFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIY 330

Query: 418 IKMQ------ESDVPPNVIT-----------------------------WNVLISGYIQN 442
            +M+      +S    NV+T                              + L++ Y + 
Sbjct: 331 KQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKF 390

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
           G+ + A  +F  M + D V     +W S+I+G+ Q  +   AL  FR M++    P+   
Sbjct: 391 GDSNYANSIFSTMKERDVV-----AWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDI 445

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
           + S++ AC  L   +    IHG V++  L+  + V +SL+D Y+K G    +  IF  M 
Sbjct: 446 MASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMP 505

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            K+++ WNS+I  Y  +     +++LF Q+    L P+  +F S++ A S    +  GK 
Sbjct: 506 LKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKS 565

Query: 623 VFCSITECYQIIPM-IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
           V   +   +  IP  ++  + +ID+Y + G L+ A    E +  E +   W +++     
Sbjct: 566 VHGYLVRLW--IPFDLQVENTLIDMYIKCGLLKYAQHIFERIS-EKNLVAWNSMIGGYGS 622

Query: 682 HGNIDLAVLAIERLFD------LEPGDVLIQRLI 709
           HG    A+     LFD      ++P DV    L+
Sbjct: 623 HGECSKAI----ELFDEMRSSGIKPDDVTFLSLL 652



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 168/343 (48%), Gaps = 20/343 (5%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
            C N +  EA+    ++     K   +   +++ AC     + L   +H F +    ++D
Sbjct: 418 FCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLD 477

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           VFV + LL +Y+K G  + A  +F DM  +NL  W+++I  Y R+      + LF  +++
Sbjct: 478 VFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLR 537

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + L+PD   F  +L A  +      GK +H  +++L +    +V N+++ +Y+KCG L +
Sbjct: 538 NDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKY 597

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A+  FE + EK+ VAWNSMI GY   GE  +A  LFD+M    IK   VTF  L+ S N 
Sbjct: 598 AQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNH 657

Query: 271 LGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G  +  + + + M+   GI P +  +  ++  + + G    A    K M    V P+  
Sbjct: 658 SGLIEEGLHLFEMMKMKFGIEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMP---VEPDRS 714

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
              S + +C          +IH L +++G     +V N L+NM
Sbjct: 715 IWLSLLCSC----------KIH-LNLELG----EMVANKLLNM 742



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 26/206 (12%)

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
           + L Q+   +   +    S  Y    T  S+L ACA L      K IH  ++   L S  
Sbjct: 29  KSLVQQRQYIEALKLYTKSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGLHSDQ 88

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFD-----GMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
            + +SLI+ Y K G    +  +FD     G+S  D+  WNS+I GY   G     +  F 
Sbjct: 89  YITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGMVQFG 148

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
           +M+S G K  +      I ++ +  M++                P +E  +A+ID Y + 
Sbjct: 149 RMQSSGYKEGKQ-----IHSYIVRNMLNFD--------------PFLE--TALIDTYFKC 187

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALL 676
           G+  EA    + +    +   W  ++
Sbjct: 188 GRPTEARYLFKKLKDRSNIVAWNVMI 213


>gi|297794983|ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311211|gb|EFH41635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 658

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 192/614 (31%), Positives = 318/614 (51%), Gaps = 52/614 (8%)

Query: 264 LIRSYNQLGQCDVAMEMVKR--MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           LIR+  +LG   V M+   R  +E +    + F WT +I G+   G+  +A+ ++  M  
Sbjct: 88  LIRTLTKLG---VPMDPYPRRVIEPVQFR-NPFLWTAVIRGYTIEGKFDEAIAMYGCMRK 143

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
             + P   T ++ + AC  +  L +G + H+   ++     V VGN++I+MY KC  +  
Sbjct: 144 EEITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVC 203

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
           A +VFD + ++DV SW  +IA Y + G    A +LF  +   D    ++ W  +++G+ Q
Sbjct: 204 ARKVFDEMPERDVISWTELIAAYARVGNMESAADLFESLPTKD----MVAWTAMVTGFAQ 259

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
           N    EA++ F RM K+  ++ +  +    I+   QLG    A    +  Q S + P+  
Sbjct: 260 NAKPQEALEYFDRMEKSG-IRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDH 318

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
            ++                                  ++LID Y+K GN+  +  +F  M
Sbjct: 319 VVIG---------------------------------SALIDMYSKCGNVEEAVNVFVSM 345

Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQM-KSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           ++K++ +++S+I G   HG    ALDLF  M     +KPN  TF+  + A S +G+VD G
Sbjct: 346 NNKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQG 405

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
           ++VF S+ + + + P  +HY+ M+DL GR+G+L+EA+E I+ M +EP   +W ALL ACR
Sbjct: 406 RQVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTMSVEPHGGVWGALLGACR 465

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           IH N D+A +A E LF+LEP  +    L+  +Y+  G     L VRKL +E   + +   
Sbjct: 466 IHNNPDIAEIAAEHLFELEPDIIGNYILLSNVYSSAGDWGGVLSVRKLIKEKGLKKTPAV 525

Query: 741 CWIEVKN-LVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEKEE 794
            W+  KN  ++ F  G  +   S  +   L+ + E +TA      L      + +  K  
Sbjct: 526 SWVVDKNGQMHKFFPGNLNHPMSKKIQDKLEELVERLTALGYQPDLSSVPYDVSDNAKRL 585

Query: 795 ISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCL 854
           I   H+EKLALAF+L+ +++  +TI+I+KN+RMC  CH   +  S +    I + D+   
Sbjct: 586 ILIQHTEKLALAFSLLTTNR-DYTIKIMKNLRMCQDCHMFMRLASEVTGRVIIMRDNMRF 644

Query: 855 HHFKNGQCSCGDYW 868
           HHF++G CSCGD+W
Sbjct: 645 HHFRSGACSCGDFW 658



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 121/462 (26%), Positives = 221/462 (47%), Gaps = 48/462 (10%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           GR N   +   S  +   ++  ++ I+ L  CI+ N I   +++H   L    +   ++ 
Sbjct: 29  GRTNNNNSSTFSEISHQRELLVSSLISKLDDCINLNQI---KQIHGHVLRKGLDQSCYIL 85

Query: 95  TKLLSVYAKCGCLDDA--REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           TKL+    K G   D   R V E ++ RN + W+A+I  Y+ + ++ E + ++  M ++ 
Sbjct: 86  TKLIRTLTKLGVPMDPYPRRVIEPVQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEE 145

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + P  F F  +L+ACG+ GD   G+  H+   +L   C   V N+++ +YVKCG ++ AR
Sbjct: 146 ITPVSFTFSALLKACGSMGDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCAR 205

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           + F+ M E+D ++W  +I+ Y ++G  + A  LF+ +  +++    V +  ++  + Q  
Sbjct: 206 KVFDEMPERDVISWTELIAAYARVGNMESAADLFESLPTKDM----VAWTAMVTGFAQNA 261

Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
           +   A+E   RME  GI  D                                    VT+ 
Sbjct: 262 KPQEALEYFDRMEKSGIRAD-----------------------------------EVTVA 286

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGF--TDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
             ISAC  L A         +A K G+  +D V++G++LI+MYSKC  +E A  VF  + 
Sbjct: 287 GYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFVSMN 346

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKM-QESDVPPNVITWNVLISGYIQNGNEDEAV 449
           +K+V+S++SMI G    G   +A +LF  M  ++ + PN +T+   ++    +G  D+  
Sbjct: 347 NKNVFSYSSMILGLATHGRAQEALDLFHYMVTQTAIKPNTVTFVGALTACSHSGLVDQGR 406

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
            +F  M +   V+     +  ++    + G+   AL + + M
Sbjct: 407 QVFASMYQTFGVEPTRDHYTCMVDLLGRAGRLQEALELIKTM 448



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 119/236 (50%), Gaps = 11/236 (4%)

Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV--YSRTIFD 559
           +++S L  C  L   N++K+IHG VLR+ L+ S  ++  LI T  K G  +  Y R + +
Sbjct: 52  SLISKLDDCINL---NQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYPRRVIE 108

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
            +  ++   W ++I GY + G +  A+ ++  M+   + P   TF +++ A    G ++L
Sbjct: 109 PVQFRNPFLWTAVIRGYTIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGSMGDLNL 168

Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
           G++ F + T   +    +   + MID+Y + G +  A +  ++MP E D   W  L+ A 
Sbjct: 169 GRQ-FHAQTFRLRGFCFVYVGNTMIDMYVKCGSIVCARKVFDEMP-ERDVISWTELIAAY 226

Query: 680 RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK-VRKLERENTR 734
              GN++ A    E    L   D++    ++  +A   KP++AL+   ++E+   R
Sbjct: 227 ARVGNMESAADLFE---SLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR 279



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 14/208 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACID-------SNSIHLARKLHAFLNLVT 87
           N +  EA+   D +   G +    T    + AC           ++ +A+K         
Sbjct: 260 NAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKS----GYSP 315

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
              V + + L+ +Y+KCG +++A  VF  M  +N++++S+MI   +   R +E ++LF  
Sbjct: 316 SDHVVIGSALIDMYSKCGNVEEAVNVFVSMNNKNVFSYSSMILGLATHGRAQEALDLFHY 375

Query: 148 MV-QDGLFPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
           MV Q  + P+   F   L AC + G  + G+ +  S+    G+   R     ++ +  + 
Sbjct: 376 MVTQTAIKPNTVTFVGALTACSHSGLVDQGRQVFASMYQTFGVEPTRDHYTCMVDLLGRA 435

Query: 206 GKLIWARRFFESMD-EKDGVAWNSMISG 232
           G+L  A    ++M  E  G  W +++  
Sbjct: 436 GRLQEALELIKTMSVEPHGGVWGALLGA 463


>gi|334187347|ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g39952, mitochondrial; Flags: Precursor
 gi|332661744|gb|AEE87144.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 775

 Score =  318 bits (814), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 224/767 (29%), Positives = 374/767 (48%), Gaps = 80/767 (10%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVFVK 94
           + N  +T+    ++  + V R+  + L   C  S S+   RK +A +    ++E ++FV 
Sbjct: 7   KPNLVVTLRKLSSSSASYVDRHISVIL---CDQSLSLESLRKHNALIITGGLSE-NIFVA 62

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           +KL+S YA  G  + +  VF  +  R+++ W+++I A+  +  +   +  FF M+  G  
Sbjct: 63  SKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQS 122

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKLIWARR 213
           PD F  P ++ AC     F  G  +H LV+K G       V  S +  Y KCG L  A  
Sbjct: 123 PDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACL 182

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---------------------CRE 252
            F+ M ++D VAW ++ISG+ Q GE++       KM                     C  
Sbjct: 183 VFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSN 242

Query: 253 -------------EIKLGVVTFNILIRS----YNQLGQCDVAMEMVKRMESLGITPDVFT 295
                         +K G+ +   +  S    Y++ G      E       LG   D+F+
Sbjct: 243 LGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGN---PSEAYLSFRELG-DEDMFS 298

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           WT +I+  A++G   ++ D+F EM   G+ P+GV I+  I+    +  +  G   H   +
Sbjct: 299 WTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVI 358

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIAGYCQAGYCGKAY 414
           +  F+ D  V NSL++MY K E L  AE++F  I ++ +  +WN+M+ GY +     K  
Sbjct: 359 RHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCI 418

Query: 415 ELFIKMQESDVPPNVITWNVLISG---------------YIQNGNED-------EAVDLF 452
           ELF K+Q   +  +  +   +IS                Y+   + D         +DL+
Sbjct: 419 ELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLY 478

Query: 453 QRMGKNDKVKR-------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
            +MG      R       N  +WN++IA Y    Q   A+ +F +M S  F P+ +T+++
Sbjct: 479 GKMGDLTVAWRMFCEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVT 538

Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
           +L AC    +  + + IH  +     E +L +  +LID YAK G++  SR +FD  + KD
Sbjct: 539 LLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKD 598

Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
            + WN +I GY +HG   +A+ LFDQM+   +KP   TFL+++ A + AG+V+ GKK+F 
Sbjct: 599 AVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFL 658

Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
            + + Y + P ++HYS ++DL  RSG LEEA   +  MP  PD  IW  LL++C  HG  
Sbjct: 659 KMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEF 717

Query: 686 DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
           ++ +   ER    +P +     ++  +Y+  GK E+A + R++ RE+
Sbjct: 718 EMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRES 764



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 190/394 (48%), Gaps = 12/394 (3%)

Query: 5   ILTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLN---EAITVLDSIATQGAKVRRNTYI 61
           +L+  ++L   ++++ N    +T L    G G++    + I +   I   G ++   +  
Sbjct: 381 LLSVAEKLFCRISEEGNKEAWNTMLK---GYGKMKCHVKCIELFRKIQNLGIEIDSASAT 437

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           +++ +C    ++ L + LH ++   + ++ + V   L+ +Y K G L  A  +F +  + 
Sbjct: 438 SVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA-DT 496

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           N+ TW+AMI +Y   ++  + + LF  MV +   P       +L AC N G  E G+++H
Sbjct: 497 NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIH 556

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
             + +        +  +++ +Y KCG L  +R  F++ ++KD V WN MISGY   G+ +
Sbjct: 557 RYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVE 616

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
            A  LFD+M   ++K    TF  L+ +    G  +   ++  +M    + P++  ++C++
Sbjct: 617 SAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLV 676

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
              +++G   +A      M F    P+GV   + +S+C       MG+ +   AV     
Sbjct: 677 DLLSRSGNLEEAESTVMSMPFS---PDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQ 733

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           +D      L NMYS   + E AER  +M+++  V
Sbjct: 734 NDGYY-IMLANMYSAAGKWEEAERAREMMRESGV 766


>gi|356519676|ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 728

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 210/710 (29%), Positives = 343/710 (48%), Gaps = 81/710 (11%)

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
           K G L++AR +F+ M  R + +W+ MI  YS   R+ E + L   M +  +  ++  F  
Sbjct: 53  KMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYPEALTLVSFMHRSCVALNEVSFSA 112

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           +L AC   G F  GK +HSL++K G      V +++L   V C  +  A   FE + + +
Sbjct: 113 VLSACARSGSFLLGKQVHSLLLKSGYERFGLVGSALLYFCVHCCGIREAEVVFEELRDGN 172

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVK 282
            V W+ M++GY +    D+A  +F+KM                                 
Sbjct: 173 QVLWSLMLAGYVKQDMMDDAMDMFEKM--------------------------------- 199

Query: 283 RMESLGITPDVFTWTCMISGFAQN-GRTSQALDLFKEMSFVG-VMPNGVTITSAISACTD 340
                    DV  WT +ISG+A+      +ALDLF  M     V+PN  T+   +  C  
Sbjct: 200 ------PVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVVRVCAR 253

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM------------ 388
           L  L  G  +H L +K G   D  +G ++   Y  CE ++ A+RV++             
Sbjct: 254 LGVLRAGKVVHGLCIKGGLDFDNSIGGAVTEFYCGCEAIDDAKRVYESMGGQASLNVANS 313

Query: 389 --------------------IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
                               +++ +  S+N MI GY  +G   K+  LF KM     P N
Sbjct: 314 LIGGLVSKGRIEEAELVFYELRETNPVSYNLMIKGYAMSGQFEKSKRLFEKMS----PEN 369

Query: 429 VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
           + + N +IS Y +NG  DEAV LF +     K +RN  SWNS+++GY   G+   AL ++
Sbjct: 370 LTSLNTMISVYSKNGELDEAVKLFDK----TKGERNYVSWNSMMSGYIINGKYKEALNLY 425

Query: 489 RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKS 548
             M+      +  T   +  AC+ L +  + + +H  +++   + ++ V  +L+D Y+K 
Sbjct: 426 VAMRRLSVDYSRSTFSVLFRACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKC 485

Query: 549 GNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
           G++  ++  F  + S ++  W +LI GY  HG    A+ LF  M   G+ PN  TF+ ++
Sbjct: 486 GHLAEAQRSFISIFSPNVAAWTALINGYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVL 545

Query: 609 LAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
            A + AG+V  G ++F S+  CY + P IEHY+ ++DL GRSG L+EA EFI  MPIE D
Sbjct: 546 SACNHAGLVCEGLRIFHSMQRCYGVTPTIEHYTCVVDLLGRSGHLKEAEEFIIKMPIEAD 605

Query: 669 SSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKL 728
             IW ALL A     ++++   A E+LF L+P  +    ++  +YAI G+     K+RK 
Sbjct: 606 GIIWGALLNASWFWKDMEVGERAAEKLFSLDPNPIFAFVVLSNMYAILGRWGQKTKLRKR 665

Query: 729 ERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTA 778
            +    R   G  WIE+ N ++ F     +  YSD++Y+ ++++   + +
Sbjct: 666 LQSLELRKDPGCSWIELNNKIHLFSVEDKTHLYSDVIYATVEHITATINS 715



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 219/488 (44%), Gaps = 73/488 (14%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--------NLV- 86
           GR  EA+T++  +      +   ++  +L AC  S S  L +++H+ L         LV 
Sbjct: 86  GRYPEALTLVSFMHRSCVALNEVSFSAVLSACARSGSFLLGKQVHSLLLKSGYERFGLVG 145

Query: 87  -------------TEIDVFVK----------TKLLSVYAKCGCLDDAREVFEDMRERNLY 123
                         E +V  +          + +L+ Y K   +DDA ++FE M  R++ 
Sbjct: 146 SALLYFCVHCCGIREAEVVFEELRDGNQVLWSLMLAGYVKQDMMDDAMDMFEKMPVRDVV 205

Query: 124 TWSAMIGAYS-RDQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMHS 181
            W+ +I  Y+ R+      ++LF  M +   + P++F    +++ C   G   AGK++H 
Sbjct: 206 AWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVVRVCARLGVLRAGKVVHG 265

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD---------------------- 219
           L IK G+     +  +V   Y  C  +  A+R +ESM                       
Sbjct: 266 LCIKGGLDFDNSIGGAVTEFYCGCEAIDDAKRVYESMGGQASLNVANSLIGGLVSKGRIE 325

Query: 220 ----------EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
                     E + V++N MI GY   G+ +++ RLF+KM  E +     + N +I  Y+
Sbjct: 326 EAELVFYELRETNPVSYNLMIKGYAMSGQFEKSKRLFEKMSPENL----TSLNTMISVYS 381

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           + G+ D A+++  + +      +  +W  M+SG+  NG+  +AL+L+  M  + V  +  
Sbjct: 382 KNGELDEAVKLFDKTKG---ERNYVSWNSMMSGYIINGKYKEALNLYVAMRRLSVDYSRS 438

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           T +    AC+ L +   G  +H+  +K  F  +V VG +L++ YSKC  L  A+R F  I
Sbjct: 439 TFSVLFRACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKCGHLAEAQRSFISI 498

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
              +V +W ++I GY   G   +A  LF  M    + PN  T+  ++S     G   E +
Sbjct: 499 FSPNVAAWTALINGYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVLSACNHAGLVCEGL 558

Query: 450 DLFQRMGK 457
            +F  M +
Sbjct: 559 RIFHSMQR 566



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 124/535 (23%), Positives = 225/535 (42%), Gaps = 120/535 (22%)

Query: 224 VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKR 283
           ++ N  I+  F++G+ +EA  LFD+M    +     ++N +I  Y+ LG+   A+ +V  
Sbjct: 42  ISTNISIAQRFKMGKLEEARHLFDQMPNRTVS----SWNTMISGYSLLGRYPEALTLVSF 97

Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
           M                       R+  AL             N V+ ++ +SAC    +
Sbjct: 98  MH----------------------RSCVAL-------------NEVSFSAVLSACARSGS 122

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
             +G ++HSL +K G+    LVG++L+     C  +  AE VF+ ++D +   W+ M+AG
Sbjct: 123 FLLGKQVHSLLLKSGYERFGLVGSALLYFCVHCCGIREAEVVFEELRDGNQVLWSLMLAG 182

Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE-DEAVDLFQRMGKNDKVK 462
           Y +      A ++F KM   D    V+ W  LISGY +  +  + A+DLF  M ++ +V 
Sbjct: 183 YVKQDMMDDAMDMFEKMPVRD----VVAWTTLISGYAKREDGCERALDLFGCMRRSSEVL 238

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC-----------------FYPNCVTI-- 503
            N  + + ++    +LG     L   + +   C                 FY  C  I  
Sbjct: 239 PNEFTLDCVVRVCARLG----VLRAGKVVHGLCIKGGLDFDNSIGGAVTEFYCGCEAIDD 294

Query: 504 -------------LSVLPA-CAYLVASNKVKEIHGCVLRRSLESSLPV-MNSLIDTYAKS 548
                        L+V  +    LV+  +++E    ++   L  + PV  N +I  YA S
Sbjct: 295 AKRVYESMGGQASLNVANSLIGGLVSKGRIEEAE--LVFYELRETNPVSYNLMIKGYAMS 352

Query: 549 GNIVYSRTIFDGMSSKDI--------------------------------ITWNSLICGY 576
           G    S+ +F+ MS +++                                ++WNS++ GY
Sbjct: 353 GQFEKSKRLFEKMSPENLTSLNTMISVYSKNGELDEAVKLFDKTKGERNYVSWNSMMSGY 412

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIP 635
           +++G +  AL+L+  M+   +  +R TF  +  A S       G+ +   + +  +Q+  
Sbjct: 413 IINGKYKEALNLYVAMRRLSVDYSRSTFSVLFRACSCLCSFRQGQLLHAHLIKTPFQVNV 472

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVL 690
            +   +A++D Y + G L EA      +   P+ + W AL+     HG    A+L
Sbjct: 473 YVG--TALVDFYSKCGHLAEAQRSFISI-FSPNVAAWTALINGYAYHGLGSEAIL 524



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/225 (27%), Positives = 114/225 (50%), Gaps = 2/225 (0%)

Query: 97  LLSVYAKCGCLDDAREVFEDMR-ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
           ++SVY+K G LD+A ++F+  + ERN  +W++M+  Y  + +++E + L+  M +  +  
Sbjct: 376 MISVYSKNGELDEAVKLFDKTKGERNYVSWNSMMSGYIINGKYKEALNLYVAMRRLSVDY 435

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
               F  + +AC     F  G+L+H+ +IK        V  +++  Y KCG L  A+R F
Sbjct: 436 SRSTFSVLFRACSCLCSFRQGQLLHAHLIKTPFQVNVYVGTALVDFYSKCGHLAEAQRSF 495

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
            S+   +  AW ++I+GY   G   EA  LF  M  + I     TF  ++ + N  G   
Sbjct: 496 ISIFSPNVAAWTALINGYAYHGLGSEAILLFRSMLHQGIVPNAATFVGVLSACNHAGLVC 555

Query: 276 VAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
             + +   M+   G+TP +  +TC++    ++G   +A +   +M
Sbjct: 556 EGLRIFHSMQRCYGVTPTIEHYTCVVDLLGRSGHLKEAEEFIIKM 600



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 122/261 (46%), Gaps = 4/261 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NG+  EA+ +  ++        R+T+  L +AC    S    + LHA L     +++V+V
Sbjct: 415 NGKYKEALNLYVAMRRLSVDYSRSTFSVLFRACSCLCSFRQGQLLHAHLIKTPFQVNVYV 474

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+  Y+KCG L +A+  F  +   N+  W+A+I  Y+      E + LF  M+  G+
Sbjct: 475 GTALVDFYSKCGHLAEAQRSFISIFSPNVAAWTALINGYAYHGLGSEAILLFRSMLHQGI 534

Query: 154 FPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            P+   F  +L AC + G   E  ++ HS+    G++        V+ +  + G L  A 
Sbjct: 535 VPNAATFVGVLSACNHAGLVCEGLRIFHSMQRCYGVTPTIEHYTCVVDLLGRSGHLKEAE 594

Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
            F   M  E DG+ W ++++  +   + +   R  +K+   +    +  F +L   Y  L
Sbjct: 595 EFIIKMPIEADGIIWGALLNASWFWKDMEVGERAAEKLFSLDPN-PIFAFVVLSNMYAIL 653

Query: 272 GQCDVAMEMVKRMESLGITPD 292
           G+     ++ KR++SL +  D
Sbjct: 654 GRWGQKTKLRKRLQSLELRKD 674



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 150/357 (42%), Gaps = 49/357 (13%)

Query: 414 YELFIKMQESDVP--PNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
           + LF    ++  P   NVI+ N+ I+   + G  +EA  LF +M       R  +SWN++
Sbjct: 24  FRLFTTHLQTTEPHVGNVISTNISIAQRFKMGKLEEARHLFDQMP-----NRTVSSWNTM 78

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL 531
           I+GY  LG+   AL +   M  SC   N V+  +VL ACA   +    K++H  +L+   
Sbjct: 79  ISGYSLLGRYPEALTLVSFMHRSCVALNEVSFSAVLSACARSGSFLLGKQVHSLLLKSGY 138

Query: 532 ESSLPVMNSL-------------------------------IDTYAKSGNIVYSRTIFDG 560
           E    V ++L                               +  Y K   +  +  +F+ 
Sbjct: 139 ERFGLVGSALLYFCVHCCGIREAEVVFEELRDGNQVLWSLMLAGYVKQDMMDDAMDMFEK 198

Query: 561 MSSKDIITWNSLICGYV-LHGFWHAALDLFDQM-KSFGLKPNRGTFLSIILAHSLAGMVD 618
           M  +D++ W +LI GY         ALDLF  M +S  + PN  T   ++   +  G++ 
Sbjct: 199 MPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVVRVCARLGVLR 258

Query: 619 LGKKV--FCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
            GK V   C I         I    A+ + Y     +++A    E M  +   ++  +L+
Sbjct: 259 AGKVVHGLC-IKGGLDFDNSIG--GAVTEFYCGCEAIDDAKRVYESMGGQASLNVANSLI 315

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV-RKLEREN 732
                 G I+ A L    L +  P   +   L+++ YA+ G+ E + ++  K+  EN
Sbjct: 316 GGLVSKGRIEEAELVFYELRETNP---VSYNLMIKGYAMSGQFEKSKRLFEKMSPEN 369



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/406 (20%), Positives = 169/406 (41%), Gaps = 86/406 (21%)

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           +V+  N  I    K  +LE A  +FD + ++ V SWN+MI+GY   G   +A  L   M 
Sbjct: 40  NVISTNISIAQRFKMGKLEEARHLFDQMPNRTVSSWNTMISGYSLLGRYPEALTLVSFMH 99

Query: 422 ESDVPPNVITWNVLISGYIQNGNE-----------------------------------D 446
            S V  N ++++ ++S   ++G+                                     
Sbjct: 100 RSCVALNEVSFSAVLSACARSGSFLLGKQVHSLLLKSGYERFGLVGSALLYFCVHCCGIR 159

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM--------------- 491
           EA  +F+ +   ++V      W+ ++AGY +    ++A+ +F KM               
Sbjct: 160 EAEVVFEELRDGNQVL-----WSLMLAGYVKQDMMDDAMDMFEKMPVRDVVAWTTLISGY 214

Query: 492 ------------------QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
                             +SS   PN  T+  V+  CA L      K +HG  ++  L+ 
Sbjct: 215 AKREDGCERALDLFGCMRRSSEVLPNEFTLDCVVRVCARLGVLRAGKVVHGLCIKGGLDF 274

Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLHGFWHAALDLFDQM 592
              +  ++ + Y     I  ++ +++ M  +  +   NSLI G V  G    A  +F ++
Sbjct: 275 DNSIGGAVTEFYCGCEAIDDAKRVYESMGGQASLNVANSLIGGLVSKGRIEEAELVFYEL 334

Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
           +    + N  ++  +I  ++++G  +  K++F  ++        +   + MI +Y ++G+
Sbjct: 335 R----ETNPVSYNLMIKGYAMSGQFEKSKRLFEKMSP-----ENLTSLNTMISVYSKNGE 385

Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV---LAIERL 695
           L+EA++  +    E +   W ++++   I+G    A+   +A+ RL
Sbjct: 386 LDEAVKLFDKTKGERNYVSWNSMMSGYIINGKYKEALNLYVAMRRL 431


>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 192/597 (32%), Positives = 307/597 (51%), Gaps = 47/597 (7%)

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
           A++   R+      P+V+ +T +I GF  +G    A+ L+  M    ++P+   + S + 
Sbjct: 96  AIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILK 155

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
           AC    AL  G E+HS A+K+G + + LV   ++ +Y KC EL  A RVF+         
Sbjct: 156 ACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFE--------- 206

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMG 456
                                      ++P +V+   V+IS Y   G  +EA  +F R+ 
Sbjct: 207 ---------------------------EMPEDVVASTVMISSYSDQGLVEEAGAVFSRVR 239

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
           + D     T  W ++I G+ +  + N AL  FR MQ     PN  TI+ VL AC+ L A 
Sbjct: 240 RKD-----TVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGAL 294

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
              + +H  + +  +E +L V N+LI+ Y++ G+I  ++T+FD M  +D+IT+N++I G 
Sbjct: 295 EIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGL 354

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
            ++G    A++LF  M    L+P   TF+ ++ A S  G+VD G K+F S+T  Y + P 
Sbjct: 355 SMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQ 414

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF 696
           IEHY  M+DL GR G+LEEA + I  M + PD  +   LL+AC++H N++L     + L 
Sbjct: 415 IEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLE 474

Query: 697 DLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG 756
           D    D     L+  +YA  GK ++A +VR   +E   +   G   IEV N ++ F+ G 
Sbjct: 475 DRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGMQKEPGCSSIEVNNEIHEFLLGD 534

Query: 757 WSESYSDLLYSWLQNVPENVTARSSHSG-----LCIEEEEKEEISGIHSEKLALAFALIG 811
                 + +Y  L+ +   +     H         IE+ EKE    IHSE+LA+ + LI 
Sbjct: 535 LRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQDIEDGEKEWALAIHSERLAICYGLI- 593

Query: 812 SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           S++    IR++KN+R+C  CH   K ++ +   ++ + D    H+F+NG CSCGDYW
Sbjct: 594 STEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVVVRDRNRFHYFENGACSCGDYW 650



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 210/421 (49%), Gaps = 43/421 (10%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D F+  +LL   +KC  +D A  +F+     N+Y ++A+I  +     + + ++L+  M+
Sbjct: 80  DPFMVFELLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRML 139

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            D + PD++L   IL+ACG+      G+ +HS  +KLG+S  R VR  ++ +Y KCG+L 
Sbjct: 140 HDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELG 199

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            ARR FE M E D VA   MIS Y   G  +EA  +F ++ R+                 
Sbjct: 200 DARRVFEEMPE-DVVASTVMISSYSDQGLVEEAGAVFSRVRRK----------------- 241

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
                                 D   WT MI GF +N   ++AL+ F+ M    V PN  
Sbjct: 242 ----------------------DTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEF 279

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           TI   +SAC+ L AL +G  +HS   K     ++ VGN+LINMYS+C  ++ A+ VFD +
Sbjct: 280 TIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEM 339

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
           KD+DV ++N+MI+G    G   +A ELF  M    + P  +T+  +++     G  D   
Sbjct: 340 KDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGF 399

Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
            +F  M ++  V+     +  ++    ++G+   A  + R M+ +   P+ + + ++L A
Sbjct: 400 KIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMT---PDHIMLGTLLSA 456

Query: 510 C 510
           C
Sbjct: 457 C 457



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 155/332 (46%), Gaps = 35/332 (10%)

Query: 62  NLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM--- 117
           ++L+AC    ++   R++H+  L L    +  V+ +++ +Y KCG L DAR VFE+M   
Sbjct: 152 SILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPED 211

Query: 118 ---------------------------RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
                                      R ++   W+AMI  + R++     +E F  M  
Sbjct: 212 VVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQG 271

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           + + P++F    +L AC   G  E G+ +HS + K  +     V N+++ +Y +CG +  
Sbjct: 272 ENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDE 331

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A+  F+ M ++D + +N+MISG    G++ +A  LF  M    ++   VTF  ++ + + 
Sbjct: 332 AQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSH 391

Query: 271 LGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
            G  D   ++   M    G+ P +  + CM+    + GR  +A DL + M      P+ +
Sbjct: 392 GGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMT---PDHI 448

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
            + + +SAC   K L +G ++  +    G  D
Sbjct: 449 MLGTLLSACKMHKNLELGEQVAKVLEDRGQAD 480



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 135/269 (50%), Gaps = 8/269 (2%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFL-NL 85
           +D    N  +N A+     +  QG  VR N  T + +L AC    ++ + R +H+++   
Sbjct: 250 IDGFVRNEEMNRALEAFRGM--QGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKF 307

Query: 86  VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
             E+++FV   L+++Y++CG +D+A+ VF++M++R++ T++ MI   S + + R+ +ELF
Sbjct: 308 EIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELF 367

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
            +M+   L P +  F  +L AC + G  + G K+ HS+    G+         ++ +  +
Sbjct: 368 RVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGR 427

Query: 205 CGKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
            G+L  A     +M    D +   +++S   ++ +N E      K+  +  +    T+ +
Sbjct: 428 VGRLEEAYDLIRTMKMTPDHIMLGTLLSA-CKMHKNLELGEQVAKVLEDRGQADSGTYVL 486

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPD 292
           L   Y   G+   A ++  +M+  G+  +
Sbjct: 487 LSHVYASSGKWKEAAQVRAKMKEAGMQKE 515


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  317 bits (813), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 190/578 (32%), Positives = 300/578 (51%), Gaps = 37/578 (6%)

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P      + I+AC   K L    ++H+      F  D  + NSLI++Y KC  +  A +V
Sbjct: 49  PTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKV 108

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI---SGYIQN 442
           FD ++ KD+ SW S+IAGY Q     +A  L   M +    PN  T+  L+     +  +
Sbjct: 109 FDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADS 168

Query: 443 G--------------NEDEAV-----DLFQRMGKNDKV--------KRNTASWNSLIAGY 475
           G              +ED  V     D++ R G  D           +N  SWN+LI+G+
Sbjct: 169 GIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGF 228

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
            + G    AL  F +M  + F     T  SV  + A L A  + K +H  +++   + + 
Sbjct: 229 ARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTA 288

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
              N+L+D YAKSG+++ +R +FD +  KD++TWN+++  +  +G    A+  F++M+  
Sbjct: 289 FAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKS 348

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
           G+  N+ TFL I+ A S  G+V  GK+ F  + E Y + P I+H+  ++ L GR+G L  
Sbjct: 349 GIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKE-YDLEPEIDHFVTVVALLGRAGLLNF 407

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A+ FI  MPIEP +++W ALL ACR+H N  +   A + +F+L+P D     L+  IYA 
Sbjct: 408 ALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNIYAS 467

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN 775
            G+ + A +VR++ +    +      W+E++N V+ FV    +   ++ +Y     + + 
Sbjct: 468 TGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPRAEEIYKMWGQISKK 527

Query: 776 VTARS-----SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
           +          +  L ++++E+E     HSEKLALAFALI    A  TIRI+KNIR+C  
Sbjct: 528 IRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALI-EMPAGATIRIMKNIRICGD 586

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH   KY+S +   EI + D+   HHF NG CSC DYW
Sbjct: 587 CHSAFKYISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 208/447 (46%), Gaps = 44/447 (9%)

Query: 60  YINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
           Y   + AC  S ++  ARK+HA L +     D F+   L+ +Y KCG + +AR+VF++MR
Sbjct: 54  YHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVFDEMR 113

Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
            +++ +W+++I  Y+++    E + L   M++    P+ F F  +L+A G   D   G+ 
Sbjct: 114 RKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQ 173

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H+L +K        V +++L +Y +CG +  A   F+ +D K+GV+WN++ISG+ + G+
Sbjct: 174 IHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGD 233

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD----VAMEMVKRMESL----GIT 290
            + A   F +M R   +    T++ +  S  +LG  +    V   M+K  + +    G T
Sbjct: 234 GETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNT 293

Query: 291 -----------------------PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
                                   D+ TW  M++ FAQ G   +A+  F+EM   G+  N
Sbjct: 294 LLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLN 353

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE-AAERVF 386
            VT    ++AC+    +  G     +  +     ++    +++ +  +   L  A   +F
Sbjct: 354 QVTFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIF 413

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGK----AYELFIKMQESDVPPNVITWNVLISGYIQN 442
            M  +     W +++A  C+     K    A +   ++   D  P V+ +N+    Y   
Sbjct: 414 KMPIEPTAAVWGALLAA-CRMHKNAKVGQFAADHVFELDPDDSGPPVLLYNI----YAST 468

Query: 443 GNEDEAVDLFQRMGKNDKVKRNTA-SW 468
           G  D A  + +R+ K   VK+  A SW
Sbjct: 469 GQWDAAARV-RRIMKTTGVKKEPACSW 494



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 168/361 (46%), Gaps = 5/361 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N    EAI +L  +     K    T+ +LL+A        + R++HA  +      DV+V
Sbjct: 130 NDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYV 189

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            + LL +YA+CG +D A  VF+ +  +N  +W+A+I  ++R       +  F  M+++G 
Sbjct: 190 GSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGF 249

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
               F +  +  +    G  E GK +H+ +IK          N++L +Y K G +I AR+
Sbjct: 250 EATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARK 309

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+ +D+KD V WN+M++ + Q G   EA   F++M +  I L  VTF  ++ + +  G 
Sbjct: 310 VFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGL 369

Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
                   + M+   + P++  +  +++   + G  + AL    +M    + P      +
Sbjct: 370 VKEGKRYFEMMKEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMP---IEPTAAVWGA 426

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
            ++AC   K   +G        ++   DD      L N+Y+   + +AA RV  ++K   
Sbjct: 427 LLAACRMHKNAKVGQFAADHVFELD-PDDSGPPVLLYNIYASTGQWDAAARVRRIMKTTG 485

Query: 394 V 394
           V
Sbjct: 486 V 486



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 162/375 (43%), Gaps = 47/375 (12%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N LI  Y + G    A ++   M       D+ +WT +I+G+AQN    +A+ L   M  
Sbjct: 90  NSLIHLYCKCGSVLEARKVFDEMRR----KDMVSWTSLIAGYAQNDMPEEAIGLLPGMLK 145

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
               PNG T  S + A        +G +IH+LAVK  + +DV VG++L++MY++C  ++ 
Sbjct: 146 GRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDM 205

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------- 432
           A  VFD +  K+  SWN++I+G+ + G    A   F +M  +       T+         
Sbjct: 206 ATAVFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIAR 265

Query: 433 --------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                     N L+  Y ++G+  +A  +F R+   D V     
Sbjct: 266 LGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLV----- 320

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           +WN+++  + Q G    A+  F +M+ S  Y N VT L +L AC++     + K     +
Sbjct: 321 TWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMM 380

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRT-IFDGMSSKDIITWNSLICGYVLHGFWHAA 585
               LE  +    +++    ++G + ++   IF          W +L+    +H   +A 
Sbjct: 381 KEYDLEPEIDHFVTVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHK--NAK 438

Query: 586 LDLFDQMKSFGLKPN 600
           +  F     F L P+
Sbjct: 439 VGQFAADHVFELDPD 453


>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
          Length = 778

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 203/706 (28%), Positives = 349/706 (49%), Gaps = 73/706 (10%)

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE--- 174
           R R+ + W+++  A +      E + ++  MV+ G+ PDD  FP  L A       E   
Sbjct: 76  RLRSAFLWNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPA 135

Query: 175 AGKLMHSLVIKLGMSCVRR-VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
            G  +H+  ++ G+        N+++  Y  CG+   ARR F+ M  +D V+WNS++S  
Sbjct: 136 KGAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVSAL 195

Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTF-------------------------------- 261
              G  ++A R    M R  + + V +                                 
Sbjct: 196 LTNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSVV 255

Query: 262 ---NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
              N L+  Y + G  + +M +   M+      +  +W   I  FA  G     L++F+ 
Sbjct: 256 NLGNALVDMYGKFGDLESSMHVFNGMQE----KNEVSWNSAIGCFAHAGFHEDVLEMFRL 311

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
           MS   V P  VT++S + A  DL    +G E+H  +++     D+ + N+L++MY+K   
Sbjct: 312 MSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGC 371

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
            E A  +F+ I+ ++V SWN+MIA   Q G   +A+ L I+MQ++   PN  T   L+  
Sbjct: 372 SEKASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPA 431

Query: 439 -----YIQNGNEDEA-----------------VDLFQRMGK-------NDKVKRNTASWN 469
                 ++ G +  A                 +D++ + G+        D+ +++  S+N
Sbjct: 432 CSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEKDGVSYN 491

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           +LI GY Q      +L +F++M+ +    + V+ +  L AC+ L A  + KEIHG +++R
Sbjct: 492 TLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKR 551

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            L+S   + NSL+D Y K G +  +  IF+ ++ KD+ +WN++I GY +HG    A +LF
Sbjct: 552 LLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELF 611

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
           D MK  G++ +  ++++++   S  G+VD GKK F  +     I P   HY+ M+DL GR
Sbjct: 612 DLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMI-AQNIKPQQMHYACMVDLLGR 670

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +G+L E+ E I +MP   +S +W ALL +CRIHG+I+LA LA E LF+L+P +     L+
Sbjct: 671 AGQLSESAEIIRNMPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPENSGYYTLL 730

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
             +Y+  G   +A  V+KL +    + +    W++  N +  F+ G
Sbjct: 731 RNMYSESGMWNEANGVKKLMKSRKVQKNPAYSWVQSGNKLQAFLVG 776



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 126/496 (25%), Positives = 226/496 (45%), Gaps = 42/496 (8%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  NG L +A   +  +   G  V   + +++L AC           +H   L       
Sbjct: 195 LLTNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGLNSV 254

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           V +   L+ +Y K G L+ +  VF  M+E+N  +W++ IG ++      +V+E+F LM +
Sbjct: 255 VNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRLMSE 314

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
             + P       +L A  + G F  GK +H   I+  +     + N+++ +Y K G    
Sbjct: 315 HDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGCSEK 374

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE------------------ 252
           A   FE+++ ++ V+WN+MI+   Q G   EA RL  +M +                   
Sbjct: 375 ASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSR 434

Query: 253 --EIKLG---------------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
              +K+G               +   N LI  Y + GQ ++A  +  R E  G+     +
Sbjct: 435 VASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSEKDGV-----S 489

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           +  +I G++Q+    ++L LF++M   G+  + V+    +SAC++L A   G EIH + V
Sbjct: 490 YNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLV 549

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
           K        + NSL+++Y+K   L+ A ++F+ I  KDV SWN+MI GY   G    A+E
Sbjct: 550 KRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQIDVAFE 609

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           LF  M++  +  + +++  ++S     G  D     F +M   + +K     +  ++   
Sbjct: 610 LFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMIAQN-IKPQQMHYACMVDLL 668

Query: 476 QQLGQKNNALGVFRKM 491
            + GQ + +  + R M
Sbjct: 669 GRAGQLSESAEIIRNM 684



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 179/377 (47%), Gaps = 21/377 (5%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEID 90
           L  NG   EA  ++  +   G      T +NLL AC    S+ + +++HA+ +      D
Sbjct: 397 LTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSD 456

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
           +FV   L+ VYAKCG L+ AR +F D  E++  +++ +I  YS+ Q   E + LF  M  
Sbjct: 457 LFVSNALIDVYAKCGQLNLARYIF-DRSEKDGVSYNTLIVGYSQSQCCFESLHLFQQMRL 515

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G+  D   F   L AC N   F+ GK +H +++K  +     + NS+L VY K G L  
Sbjct: 516 AGIEHDAVSFMGCLSACSNLSAFKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDT 575

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A + F  + +KD  +WN+MI GY   G+ D A  LFD M  + I+   V++  ++   + 
Sbjct: 576 ASKIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSH 635

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
            G  D   +   +M +  I P    + CM+    + G+ S++ ++ + M F     N   
Sbjct: 636 GGLVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPF---RANSDV 692

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS-----LINMYSKCEELEAAERV 385
             + + +C     +   +E+  LA +  F  ++   NS     L NMYS+      A  V
Sbjct: 693 WGALLGSCR----IHGDIELARLAAEHLF--ELKPENSGYYTLLRNMYSESGMWNEANGV 746

Query: 386 FDMIKDKDV-----YSW 397
             ++K + V     YSW
Sbjct: 747 KKLMKSRKVQKNPAYSW 763


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  317 bits (813), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 186/517 (35%), Positives = 273/517 (52%), Gaps = 48/517 (9%)

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP------PNVITW-------------- 432
           D  SWNS+I G  + G+   A   F KM+  D+       P+V+                
Sbjct: 5   DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64

Query: 433 ---------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
                          N LI  Y + G  D A+ +F +M     V ++  SW SL+ GY  
Sbjct: 65  CLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKM-----VDKDVVSWTSLVTGYSH 119

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
            G    A+ +F KM+ S  YP+ + + SVL ACA L   +  ++IH  +++  LESSL V
Sbjct: 120 NGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSV 179

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
            NSL+  YAK G+IV +   FD M ++D+I+W +LI GY  +G    +L  +DQM + G 
Sbjct: 180 DNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGT 239

Query: 598 KPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
           KP+  TF+ ++ A S  G++  G+  F ++ + Y I P  EHY+ MIDL GRSGKL EA 
Sbjct: 240 KPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAK 299

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICG 717
             +  M + PD+ +W+ALL ACR+H  ++L  +A + LF+LEP + +   ++  +Y+  G
Sbjct: 300 GLLNQMVVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAG 359

Query: 718 KPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV----- 772
           K EDA ++R+L R        G  WIE  + V TF++   +    + +YS +  +     
Sbjct: 360 KWEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIK 419

Query: 773 PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQ-APHTIRIVKNIRMCVHC 831
                   S +    ++E KE     HSEKLA+AF L+   Q AP  IRI KN+R+C  C
Sbjct: 420 EAGYVPDMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAP--IRIFKNLRVCGDC 477

Query: 832 HETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           H   KY S ++   I L DS C HHF  G+CSCGDYW
Sbjct: 478 HTAMKYTSKVYARHIILRDSNCFHHFTEGRCSCGDYW 514



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 183/375 (48%), Gaps = 23/375 (6%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVF--V 93
           G   +A++    + ++  K+   T  ++L +      +  A  +H  + + T  + +  V
Sbjct: 20  GFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLI-IKTGFEAYKLV 78

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +YAK G LD A  VF  M ++++ +W++++  YS +  + E ++LF  M   G+
Sbjct: 79  NNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISGV 138

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           +PD      +L AC      + G+ +H+ ++K G+     V NS++ +Y KCG ++ A R
Sbjct: 139 YPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVTMYAKCGSIVDANR 198

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F++M  +D ++W ++I GY Q G    + + +D+M     K   +TF  L+ + +  G 
Sbjct: 199 AFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYITFIGLLFACSHNGL 258

Query: 274 CDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
                   + M+ + GI P    + CMI    ++G+ ++A  L  +M    V P+ V   
Sbjct: 259 LGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQMV---VAPDAVVWK 315

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS-----LINMYSKCEELEAAERVFD 387
           + ++AC   K L +G     +A K  F  + +  NS     L NMYS   + E A R+  
Sbjct: 316 ALLAACRVHKELELG----EMAAKNLFELEPM--NSMPYVMLSNMYSAAGKWEDAARIRR 369

Query: 388 MIKDKDV-----YSW 397
           +++ + +     YSW
Sbjct: 370 LMRSRGICKEPGYSW 384



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 150/328 (45%), Gaps = 42/328 (12%)

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------------- 261
           M+  D V+WNS+I G  + G  ++A   F KM   ++K+   T                 
Sbjct: 1   MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60

Query: 262 -------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
                              N LI  Y + G+ D A+ +  +M    +  DV +WT +++G
Sbjct: 61  ISVHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKM----VDKDVVSWTSLVTG 116

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
           ++ NG   +A+ LF +M   GV P+ + + S +SAC +L  +  G +IH+  VK G    
Sbjct: 117 YSHNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESS 176

Query: 363 VLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE 422
           + V NSL+ MY+KC  +  A R FD +  +DV SW ++I GY Q G    + + + +M  
Sbjct: 177 LSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIA 236

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
           +   P+ IT+  L+     NG        F+ M K   +K     +  +I    + G+  
Sbjct: 237 TGTKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLA 296

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPAC 510
            A G+  +M  +   P+ V   ++L AC
Sbjct: 297 EAKGLLNQMVVA---PDAVVWKALLAAC 321



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 156/385 (40%), Gaps = 48/385 (12%)

Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLV 183
           +W+++I    R+    + +  F  M    +  D++  P +L +  +    +    +H L+
Sbjct: 8   SWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHCLI 67

Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
           IK G    + V N+++ +Y K GKL  A   F  M +KD V+W S+++GY   G  +EA 
Sbjct: 68  IKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAI 127

Query: 244 RLFDKM------------------CREEIKLGVVTF--------------------NILI 265
           +LF KM                  C E   L V+ F                    N L+
Sbjct: 128 KLFCKMRISGVYPDQIAVASVLSACAE---LTVMDFGQQIHATLVKSGLESSLSVDNSLV 184

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             Y + G    A      M     T DV +WT +I G+AQNGR   +L  + +M   G  
Sbjct: 185 TMYAKCGSIVDANRAFDNMP----TRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTK 240

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKM-GFTDDVLVGNSLINMYSKCEELEAAER 384
           P+ +T    + AC+    L  G        K+ G          +I++  +  +L  A+ 
Sbjct: 241 PDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKG 300

Query: 385 VFD-MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
           + + M+   D   W +++A  C+     +  E+  K      P N + + +L + Y   G
Sbjct: 301 LLNQMVVAPDAVVWKALLAA-CRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAG 359

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASW 468
             ++A  + + M      K    SW
Sbjct: 360 KWEDAARIRRLMRSRGICKEPGYSW 384



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 147/343 (42%), Gaps = 24/343 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           NG   EAI +   +   G    +    ++L AC +   +   +++HA L     E  + V
Sbjct: 120 NGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSV 179

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+++YAKCG + DA   F++M  R++ +W+A+I  Y+++ R +  ++ +  M+  G 
Sbjct: 180 DNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGT 239

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL-GMSCVRRVRNSVLAVYVKCGKLIWAR 212
            PD   F  +L AC + G   +G+     + K+ G+         ++ +  + GKL  A+
Sbjct: 240 KPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAK 299

Query: 213 RFFESM-DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
                M    D V W ++++   ++ +  E   +  K   E   +  + + +L   Y+  
Sbjct: 300 GLLNQMVVAPDAVVWKALLAA-CRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAA 358

Query: 272 GQCDVAMEMVKRMESLGITPDV-FTW---TCMISGFAQNGRT-----------SQALDLF 316
           G+ + A  + + M S GI  +  ++W      +S F    R             + + L 
Sbjct: 359 GKWEDAARIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLI 418

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
           KE  +V  M   +  T       ++K L +      LAV  G 
Sbjct: 419 KEAGYVPDMSFALHDTD-----DEVKELGLAYHSEKLAVAFGL 456



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 10/133 (7%)

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           M   D ++WNSLI G V  GF   AL  F +M+S  +K +  T  S++ + +   ++   
Sbjct: 1   MEFDDEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNA 60

Query: 621 KKVFCSIT----ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
             V C I     E Y+++      +A+ID+Y + GKL+ A+     M ++ D   W +L+
Sbjct: 61  ISVHCLIIKTGFEAYKLVN-----NALIDMYAKQGKLDCAIMVFSKM-VDKDVVSWTSLV 114

Query: 677 TACRIHGNIDLAV 689
           T    +G+ + A+
Sbjct: 115 TGYSHNGSYEEAI 127


>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 632

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 211/690 (30%), Positives = 355/690 (51%), Gaps = 68/690 (9%)

Query: 61  INLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           ++LLQ CI      L  + H  + L+T+   F+     + +           +F      
Sbjct: 2   LSLLQLCIVLVHHSLHHQNHWVVLLLTQCTRFLAPSSYTCH-----------IFHAATHP 50

Query: 121 NLYTWSAMIGAYSRDQRWREV-VELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKL 178
           ++  ++ M+  YS+     +V V LF  M+Q   + P+   +  ++++ G+        L
Sbjct: 51  DVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKSAGS-----ESML 105

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
             + V+K G      VRN +L +Y K G + +AR+ F+ M ++    WN MISGY++ G 
Sbjct: 106 FLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGN 165

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
            +EA  LF  M  +EI   V+T+  +I  + + G    A     +M        V +W  
Sbjct: 166 EEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPER----SVVSWNA 221

Query: 299 MISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEI-HSLAVK 356
           M+SG+AQ G   + + LF +M   G V P+  T  + IS+C+ L    +   I   L  K
Sbjct: 222 MLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDK 281

Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
           +GF  +  V  +L++M++KC  LEAA ++F+ +    VY +                   
Sbjct: 282 VGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQL---GVYKY------------------- 319

Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
                 S VP     WN +IS Y + G+   A  LF +M +     R+T SWNS+IAGY 
Sbjct: 320 -----RSSVP-----WNAMISAYARVGDLPSAKHLFDKMPQ-----RDTVSWNSMIAGYT 364

Query: 477 QLGQKNNALGVFRKMQSS--CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS 534
           Q G+   A+ +F +M SS     P+ VT++SV  AC +L            +    ++ S
Sbjct: 365 QNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQIS 424

Query: 535 LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
           + V NSLI+ Y++ G++  +  IF  M+++D++++N+LI G+  HG    +++L  +MK 
Sbjct: 425 ISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKE 484

Query: 595 FGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLE 654
            G++P+R T+++I+ A S AG++D G+++F SI       P ++HY+ MID+ GR+G+LE
Sbjct: 485 DGIEPDRITYIAILTACSHAGLLDEGQRLFESIK-----FPDVDHYACMIDMLGRAGRLE 539

Query: 655 EAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYA 714
           EAM+ I+ MP+EP + I+ +LL A  IH  ++L  LA  +LF +EP +     L+  IYA
Sbjct: 540 EAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYA 599

Query: 715 ICGKPEDALKVRKLERENTRRNSFGQCWIE 744
             G+ ++  KVR   R+   + + G  W+E
Sbjct: 600 SAGRWKEGDKVRDTMRKQGVKKTTGLSWLE 629


>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  317 bits (812), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 221/828 (26%), Positives = 396/828 (47%), Gaps = 127/828 (15%)

Query: 63  LLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
           + + C    +  L ++ HA + +      VFV   LL +Y  CG L  A ++F+ M  R+
Sbjct: 55  VFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRD 114

Query: 122 LYTWSAMIGAY-----------------SRDQ-RWR-------------EVVELFFLMVQ 150
           + +W+AMI  Y                 +RD   W              E V++F  M +
Sbjct: 115 VVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGR 174

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
            G+  D+  F  IL+ C    +++ G  +H + +++G        +++L +Y KC +L  
Sbjct: 175 SGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDE 234

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR------------------- 251
           +   F +M +K+ ++W+++I+G  Q    D   ++F +M +                   
Sbjct: 235 SFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCAT 294

Query: 252 -EEIKLGVVTFNILIRS------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
             +++LG       ++S             +   +C+  M+  +R+  +    ++ ++  
Sbjct: 295 LPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCN-NMQDAQRLFDMSENLNLQSYNA 353

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           MI+G++Q     +AL LF+++S   +  + ++++ A+ AC  +K L+ G+++H LA K  
Sbjct: 354 MITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSN 413

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
           F+ ++ V N+ I+MY KCE L+ A RVFD +  KD  SWN++IA + Q     K   + +
Sbjct: 414 FSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILV 473

Query: 419 KMQESDVPPNVITW----------------------------------NVLISGYIQNGN 444
            M  S + P+  T+                                  + L+  Y + G 
Sbjct: 474 SMLRSGMEPDEYTFGSVLKACAGDSLNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGM 533

Query: 445 EDEAVDLFQRM---------------------GKNDK-VKRNTASWNSLIAGYQQLGQKN 482
            DEA  +  ++                     G  D+ V+    SWN++I+GY    Q  
Sbjct: 534 IDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSE 593

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
           +A   F +M      P+  T  +VL  CA L +    K+IH  V+++ L+  + + ++L+
Sbjct: 594 DAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLV 653

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
           D Y+K GN+  SR +F+    +D +TWN++ICGY  HG    A+ LF+ M    + PN  
Sbjct: 654 DMYSKCGNLHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHA 713

Query: 603 TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           TF+S++ A +  G+V+ G   F  + + Y + P +EHYS M+D+ G+SG++E+A+E I++
Sbjct: 714 TFVSLLRACAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQE 773

Query: 663 MPIEPDSSIWEALLTACRIH-GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPED 721
           MP E D  IW  LL+AC+I+  N++ A +A   L  L+P D     L+  IYA  G  + 
Sbjct: 774 MPFEADDVIWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYILLSNIYADAGMWDK 833

Query: 722 ALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG-----WSESYSDL 764
           A ++R   R +  +   G  W+E+++  +TF+ G      W E Y+ L
Sbjct: 834 ASELRTAMRSDKLKKEPGCSWVEIRDEFHTFLVGDKAHPRWKEIYNGL 881



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 160/660 (24%), Positives = 282/660 (42%), Gaps = 132/660 (20%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           F  + + C      E GK  H+ +I  G      V N +L +Y+ CG L +A + F+ M 
Sbjct: 52  FSFVFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMP 111

Query: 220 EKDGVAWNSMI-------------------------------SGYFQIGENDEAHRLFDK 248
            +D V+WN+MI                               SG+ Q GEN E+ ++F +
Sbjct: 112 LRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIE 171

Query: 249 MCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV--------------- 293
           M R  ++    +F+++++  + L    +  ++      +G   DV               
Sbjct: 172 MGRSGVEFDNKSFSVILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKR 231

Query: 294 ----------------FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
                            +W+ +I+G  QN      L +FKEM  VGV  +     S + +
Sbjct: 232 LDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKS 291

Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
           C  L  L +G ++H+ A+K  F  D +V  + ++MY+KC  ++ A+R+FDM ++ ++ S+
Sbjct: 292 CATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSY 351

Query: 398 NSMIAGYCQAGYCGKAYELFIKMQ-----------------------------------E 422
           N+MI GY Q     +A  LF K+                                    +
Sbjct: 352 NAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATK 411

Query: 423 SDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
           S+   N+   N  I  Y +    DEA  +F  MG+ D V     SWN++IA ++Q  +++
Sbjct: 412 SNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAV-----SWNAIIAAHEQNEERS 466

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
             L +   M  S   P+  T  SVL ACA   + N   EIH  +++  + S+  + +SL+
Sbjct: 467 KTLNILVSMLRSGMEPDEYTFGSVLKACAG-DSLNHGMEIHTTIVKLGMASNPYIGSSLV 525

Query: 543 DTYAKSGNI------------------VYS---------RTIFDGMSSKDIITWNSLICG 575
           D Y+K G I                   YS         + I D    + I++WN++I G
Sbjct: 526 DMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISG 585

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
           YV+      A   F++M   G+ P++ T+ +++   +    + LGK++   + +  ++  
Sbjct: 586 YVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIK-KELQY 644

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
            +   S ++D+Y + G L ++    E  PI  D   W A++     HG  + A+   E +
Sbjct: 645 DVYICSTLVDMYSKCGNLHDSRLMFEKAPIR-DFVTWNAMICGYAHHGMGEEAIKLFESM 703



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 126/534 (23%), Positives = 229/534 (42%), Gaps = 61/534 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           N  L+  + +   +   G  V ++ Y ++L++C     + L  +LHA  L      D  V
Sbjct: 260 NNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSCATLPDLRLGTQLHAHALKSDFVKDGIV 319

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
           +T  L +YAKC  + DA+ +F+     NL +++AMI  YS+       + LF  + +  L
Sbjct: 320 RTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSSL 379

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
             D+      L+AC        G  +H L  K   S    V N+ + +Y KC  L  A R
Sbjct: 380 GFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEACR 439

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS------ 267
            F+ M  KD V+WN++I+ + Q  E  +   +   M R  ++    TF  ++++      
Sbjct: 440 VFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGDSL 499

Query: 268 ----------------------------YNQLGQCDVA---------------------- 277
                                       Y++ G  D A                      
Sbjct: 500 NHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEHPE 559

Query: 278 -MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
            +E  K ++   +   + +W  +ISG+    ++  A   F  M  +G+ P+  T ++ + 
Sbjct: 560 TIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTVLD 619

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
            C +L ++ +G +IH+  +K     DV + ++L++MYSKC  L  +  +F+    +D  +
Sbjct: 620 TCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKAPIRDFVT 679

Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMG 456
           WN+MI GY   G   +A +LF  M   ++ PN  T+  L+      G  +  +D F  M 
Sbjct: 680 WNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRACAHMGLVERGLDYFHMMK 739

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           K   +      +++++    + G+   AL + ++M    F  + V   ++L AC
Sbjct: 740 KEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMP---FEADDVIWRTLLSAC 790


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 196/652 (30%), Positives = 321/652 (49%), Gaps = 76/652 (11%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEM--SFVGVMPNGVTITSAISACTDLKALAMG 347
           T  +  WT +ISG A+ GR +  +  F EM        PN   +   +  C  L  +  G
Sbjct: 86  TRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESG 145

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD-------------- 393
             IH   ++ G   DV++ N++++MY+KC +   A R F  +  KD              
Sbjct: 146 RRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQD 205

Query: 394 -----------------VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV-- 434
                            V SWN++++G  + G+  +A     +M  + V  +  T+++  
Sbjct: 206 GDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVF 265

Query: 435 ---------------------------------LISGYIQNGNEDEAVDLFQRMGKNDKV 461
                                            L+  Y + G  + A+ +F R   +D  
Sbjct: 266 ALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRW--SDFT 323

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
           +    +W++++AGY Q G++  AL  FR+M           + SV  ACA      + ++
Sbjct: 324 EDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQ 383

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           +HG V +       P+ ++++D Y+KSG++  +  IF    +K++  W +++C Y  HG 
Sbjct: 384 VHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQ 443

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
              AL++F +MK+  + PN  T ++++ A S +G+V  G   F  + E Y I+P  EHY+
Sbjct: 444 GRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYN 503

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            M+DLYGR+G L++A  FIE+  I  ++ +W+ LL+ACR+H +I+ A LA E+L  LE  
Sbjct: 504 CMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQY 563

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
           D     L+  +YA   K  D  K+R   +E   R   GQ WI +KN+V+ FV    S   
Sbjct: 564 DAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVHRFVALDTSHPR 623

Query: 762 SDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAP 816
           S  +Y++L+ + E +     T+R+      IEEE++E     HSEKLA+AF +I S+   
Sbjct: 624 SAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAIAFGII-STPVG 682

Query: 817 HTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             +RI KN+R+C  CHE  K+++     EI + D    HHFK+GQCSC D+W
Sbjct: 683 TALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCEDFW 734



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/516 (24%), Positives = 230/516 (44%), Gaps = 88/516 (17%)

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD--GLFPDDFLFPKIL 164
           L +A  VF+    R+L  W+++I   +R+ R  + +  F  M+ +     P+ F+   +L
Sbjct: 74  LHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVL 133

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
           + C   GD E+G+ +H  +++ G+     + N+VL +Y KCG    ARR F +M +KD  
Sbjct: 134 RCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDAT 193

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           +WN +I    Q G+   A +LFD+    ++                              
Sbjct: 194 SWNIVIRACLQDGDLVGATQLFDESSLRDVS----------------------------- 224

Query: 285 ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
                     +W  ++SG  ++G T++AL   ++M   GV  +  T +   +    L + 
Sbjct: 225 ----------SWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSR 274

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD---KDVYSWNSMI 401
            +G ++H   V     +D  VG SL++MY KC E+E+A  +FD   D      ++W++M+
Sbjct: 275 DLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMV 334

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-----GYIQNGNE----------- 445
           AGY Q G   +A E F +M    VP        + S     G ++ G +           
Sbjct: 335 AGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHR 394

Query: 446 ------DEAVDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKM 491
                    VD++ + G  +   R        N A W +++  Y   GQ   AL +F +M
Sbjct: 395 FDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRM 454

Query: 492 QSSCFYPNCVTILSVLPACAY--LVAS-----NKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           ++    PN +T+++VL AC++  LV+      N ++E +G V       +    N ++D 
Sbjct: 455 KAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIV------PNTEHYNCMVDL 508

Query: 545 YAKSGNIVYSRT-IFDGMSSKDIITWNSLICGYVLH 579
           Y ++G +  ++  I +   S + + W +L+    LH
Sbjct: 509 YGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLH 544



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 142/318 (44%), Gaps = 8/318 (2%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +  L  +G   EA+  L  +   G      TY  +       +S  L R+LH  + +
Sbjct: 227 NTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVV 286

Query: 86  -VTEIDVFVKTKLLSVYAKCGCLDDAREVFE---DMRERNLYTWSAMIGAYSRDQRWREV 141
            V E D FV   L+ +Y KCG ++ A  +F+   D  E   + WS M+  Y ++ R  E 
Sbjct: 287 AVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEA 346

Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
           +E F  M+++G+    F+   +  AC N G  E G+ +H  V KLG      + ++++ +
Sbjct: 347 LEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDM 406

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
           Y K G L  A R F S   K+   W +M+  Y   G+   A  +F +M  E+I    +T 
Sbjct: 407 YSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITL 466

Query: 262 NILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
             ++ + +  G           M E  GI P+   + CM+  + + G   +A +  +E  
Sbjct: 467 VAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENK 526

Query: 321 FVGVMPNGVTITSAISAC 338
              +    V   + +SAC
Sbjct: 527 ---ISHEAVVWKTLLSAC 541



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 99/507 (19%), Positives = 200/507 (39%), Gaps = 79/507 (15%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYI--NLLQACIDSNSIHLARKLHAFLNLVTEI--DV 91
           GR  + +     +  +      N ++   +L+ C     +   R++H ++ L + +  DV
Sbjct: 103 GRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHGWI-LRSGVCPDV 161

Query: 92  FVKTKLLSVYAKCG--------------------------CLDD-----AREVFEDMRER 120
            +   +L +YAKCG                          CL D     A ++F++   R
Sbjct: 162 VLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGATQLFDESSLR 221

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           ++ +W+ ++    R     E +     MV+ G+   ++ +  +    G     + G+ +H
Sbjct: 222 DVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQLH 281

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE---SMDEKDGVAWNSMISGYFQIG 237
             V+   +     V  S++ +Y KCG++  A   F+      E    AW++M++GY Q G
Sbjct: 282 GRVVVAVLEEDAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNG 341

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG--------- 288
             +EA   F +M RE +  G      +  +    G  +   ++   +E LG         
Sbjct: 342 REEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAPLAS 401

Query: 289 ----------------------ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
                                  T +V  WT M+  +A +G+   AL++F  M    +MP
Sbjct: 402 AIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMP 461

Query: 327 NGVTITSAISACTDLKALAMGMEIHSL-AVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           N +T+ + +SAC+    ++ G    +L   + G   +    N ++++Y +   L+ A+  
Sbjct: 462 NEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLLDKAKNF 521

Query: 386 FDMIK-DKDVYSWNSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
            +  K   +   W ++++    +    Y   A E  +++++ D    V+  N+    Y  
Sbjct: 522 IEENKISHEAVVWKTLLSACRLHKHIEYAQLASEKLVQLEQYDAGSYVLMSNM----YAT 577

Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASW 468
           N    +   L   M +    K+   SW
Sbjct: 578 NNKWLDTFKLRSSMKERRVRKQPGQSW 604


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 196/613 (31%), Positives = 316/613 (51%), Gaps = 41/613 (6%)

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMS-FVGVMPNGVTITSAISACTDLKALAMGMEIH 351
            F  T +I    +   T++   +F+E S F+ V     ++  AIS+CT +   +    IH
Sbjct: 86  AFRHTDLIPKQFKRFNTNKGCCIFREASQFIVVYSIVQSLVFAISSCTSVSYCS---AIH 142

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           +  +K     D  +G+ L++MY K    E A+R+FD + +KD+ SWNS+++G    GY G
Sbjct: 143 ARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLG 202

Query: 412 KAYELFIKMQ-ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ---RMGKNDKVK----- 462
                F +M+ ES   PN +T   ++S     G  DE   L     ++G + K K     
Sbjct: 203 ACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSL 262

Query: 463 ----------------------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
                                 R+  SWNS++  +   G     + +F  M+ +   P+ 
Sbjct: 263 INMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQ 322

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
            T++++L AC       + + IH  + R    + + +  +L++ YAK G +  S  IF+ 
Sbjct: 323 ATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEE 382

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           +  +D I W +++ GY +H     A+ LFD M   G++ +  TF  ++ A S +G+V+ G
Sbjct: 383 IKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEG 442

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
           KK F  ++E Y++ P ++HYS M+DL GRSG+LE+A E I+ MP+EP S +W ALL ACR
Sbjct: 443 KKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACR 502

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
           ++GN++L     E+L  L+P D     ++  IY+  G   DA KVR L +E     + G 
Sbjct: 503 VYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGC 562

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEI 795
            +IE  N ++ FV G      SD +++ L+ +   +       ++      I+EE K ++
Sbjct: 563 SFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDM 622

Query: 796 SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
              HSEKLA+AF L+ +      I I KN+R+C  CH TAK+ S++    I + DSK  H
Sbjct: 623 INKHSEKLAIAFGLLVTGSGVPLI-ITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFH 681

Query: 856 HFKNGQCSCGDYW 868
           HF +G CSC DYW
Sbjct: 682 HFADGLCSCRDYW 694



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 181/366 (49%), Gaps = 11/366 (3%)

Query: 32  LCGNGRLNEAITVLDSIATQ-GAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEI 89
           L G G L   +     + T+ G +    T ++++ AC D  ++   + LH  +  L    
Sbjct: 195 LSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSG 254

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
              V   L+++Y K G LD A ++FE+M  R+L +W++M+  ++ +    + ++LF LM 
Sbjct: 255 KAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMK 314

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           + G+ PD      +L+AC + G     + +H+ + + G +    +  ++L +Y K G+L 
Sbjct: 315 RAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLN 374

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            +   FE + ++D +AW +M++GY       EA +LFD M +E +++  VTF  L+ + +
Sbjct: 375 ASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACS 434

Query: 270 QLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
             G  +   +  + M E   + P +  ++CM+    ++GR   A +L K M    + P+ 
Sbjct: 435 HSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMP---MEPSS 491

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTD--DVLVGNSLINMYSKCEELEAAERVF 386
               + + AC     + +G E+    + +  +D  + ++   L N+YS       A +V 
Sbjct: 492 GVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIM---LSNIYSAAGLWRDASKVR 548

Query: 387 DMIKDK 392
            ++K++
Sbjct: 549 ALMKER 554



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 200/442 (45%), Gaps = 35/442 (7%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM- 148
           D F+  +L+S+Y K G  +DA+ +F++M  ++L +W++++   S        +  F  M 
Sbjct: 153 DGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMR 212

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
            + G  P++     ++ AC + G  + GK +H +V+KLGMS   +V NS++ +Y K G L
Sbjct: 213 TESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFL 272

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             A + FE M  +  V+WNSM+  +   G  ++   LF+ M R  I     T   L+R+ 
Sbjct: 273 DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRAC 332

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP-N 327
              G    A  +   +   G   D+   T +++ +A+ GR + + D+F+E+     +   
Sbjct: 333 TDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWT 392

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            +    A+ AC         +++  L VK G   D +    L++  S    +E  ++ F+
Sbjct: 393 AMLAGYAVHACG-----REAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFE 447

Query: 388 MIKDKDVYS-------WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
           ++   +VY        ++ M+    ++G    AYEL   M    + P+   W  L+    
Sbjct: 448 IM--SEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMP---MEPSSGVWGALLGACR 502

Query: 441 QNGNEDEAVDLFQRMGKNDKV-KRNTASWNSL--IAGYQQLGQKNNALGVFRKMQSSCFY 497
             GN +   ++ +++   D    RN    +++   AG  +   K  AL   R++  +   
Sbjct: 503 VYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRN--- 559

Query: 498 PNCVTILSVLPACAYLVASNKV 519
                     P C+++   NK+
Sbjct: 560 ----------PGCSFIEHGNKI 571


>gi|302788580|ref|XP_002976059.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
 gi|300156335|gb|EFJ22964.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
          Length = 699

 Score =  317 bits (811), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 210/701 (29%), Positives = 347/701 (49%), Gaps = 64/701 (9%)

Query: 59  TYINLLQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           ++I  L++C+   S+   + +H  +    L+T+I V     L+++Y KCG L  AREVF+
Sbjct: 12  SFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISV--GNALVNMYGKCGSLALAREVFD 69

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCGDFE 174
            M  R++ +W+A+I AY++    +E +ELF  M +DG + PD   F  ++ AC +    E
Sbjct: 70  GMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSALE 129

Query: 175 AGKLMHSLVIKLGMSCVRRV-RNSVLAVYVKCGKLIWARRFFESMDEKDGVA-WNSMISG 232
           A   + +LV + G+     V  N+++ +Y KCG L  A   FE M  +D V  W +MIS 
Sbjct: 130 AANRIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERMKIRDDVVLWTTMISV 189

Query: 233 YFQIGENDEAHRLFDKMCREEIKLG----------------------------------- 257
           Y Q G ++ A  LF +M +EE  L                                    
Sbjct: 190 YAQDGYSEAALELFQQMEKEEALLPDGFTLASALAACTGPEMLEEGREIHALVIERGCES 249

Query: 258 -VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLF 316
            +V  N L+  Y   G    A+E  ++M       +V +W  MI+ +  +    +A  +F
Sbjct: 250 ELVVGNALVSMYANCGTLQDALECFQKMAQ----RNVVSWNAMIAAYVHHNCDKEAFRIF 305

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD-DVLVGNSLINMYSK 375
            +M   GV PN VT  + +S C+   A   G+ I +L V+      D LVGN+L++ Y+K
Sbjct: 306 YQMQLEGVQPNSVTFVTFLSTCSTPAAFEDGL-IRALEVEKRVESLDALVGNALLHTYAK 364

Query: 376 CEELEAAERVFDMIKDK--DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
             +L+  +RVF  ++ +  DV +WN++I G  + G    A EL  +        N+ +WN
Sbjct: 365 LGKLDEVQRVFQRMEKQRDDVVTWNAVIEGSVRNGEFRNALELMPQ-------KNLGSWN 417

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
            L+  YI  G   +   LF+ M + D +     +WN ++  Y +      A+ +FR+M +
Sbjct: 418 GLLGAYIHVGRLADTRKLFEEMEERDVI-----TWNMILGAYVERDMAKEAVRLFRRMIA 472

Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
               PN +T  ++L ACA   +  + + +H  +  R  +S L V N+L+D + K  ++  
Sbjct: 473 EGTEPNSITWTTMLGACAGEASLAEGRRVHELIAERGADSELFVGNALVDMFGKCASLGG 532

Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
           +R  F+ + +KD  +WN L+     +G    AL  F +M+  G+KP   TF+ +  A S 
Sbjct: 533 ARQAFERIRAKDASSWNVLVAALAQNGDAEEALKQFLRMQREGIKPTDVTFIVVFWACSH 592

Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
           AG ++  K +F S+   Y I P+  HYS M DL GR+G L+EA E I+ +P   D   W 
Sbjct: 593 AGRLEQAKTIFASLRHDYGIAPLPSHYSGMTDLLGRAGFLDEAEEVIKRIPFSRDELPWM 652

Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYA 714
            LL+AC++HG+++       ++    PGD      +  I+A
Sbjct: 653 TLLSACKVHGDVERGRKVAGQVLRWNPGDSAAGVALSNIFA 693



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 224/486 (46%), Gaps = 80/486 (16%)

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
           G++P+ V+  +A+ +C  +++LA G  IH L ++ G    + VGN+L+NMY KC  L  A
Sbjct: 5   GLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALA 64

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD-VPPNVITW--------- 432
             VFD +  +DV SWN++I  Y QAG+C +A ELF  MQE   + P+ +T+         
Sbjct: 65  REVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIEPDSVTFVAVVSACCD 124

Query: 433 ---------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNT 465
                                      N L++ Y + G+   A  +F+RM    K++ + 
Sbjct: 125 PSALEAANRIFALVEERGLLDSDVVLGNALVNMYSKCGSLKSATMVFERM----KIRDDV 180

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQ-SSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
             W ++I+ Y Q G    AL +F++M+      P+  T+ S L AC       + +EIH 
Sbjct: 181 VLWTTMISVYAQDGYSEAALELFQQMEKEEALLPDGFTLASALAACTGPEMLEEGREIHA 240

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHA 584
            V+ R  ES L V N+L+  YA  G +  +   F  M+ +++++WN++I  YV H     
Sbjct: 241 LVIERGCESELVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKE 300

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMI 644
           A  +F QM+  G++PN  TF++ +   S     + G      +    ++   +E   A++
Sbjct: 301 AFRIFYQMQLEGVQPNSVTFVTFLSTCSTPAAFEDG------LIRALEVEKRVESLDALV 354

Query: 645 D-----LYGRSGKLEEAMEFIEDMPIEPDSSI-WEALLTACRIHGNIDLAV--------- 689
                  Y + GKL+E     + M  + D  + W A++     +G    A+         
Sbjct: 355 GNALLHTYAKLGKLDEVQRVFQRMEKQRDDVVTWNAVIEGSVRNGEFRNALELMPQKNLG 414

Query: 690 ---------LAIERLFD-------LEPGDVLIQRLILQIYAICGKPEDALKV-RKLEREN 732
                    + + RL D       +E  DV+   +IL  Y      ++A+++ R++  E 
Sbjct: 415 SWNGLLGAYIHVGRLADTRKLFEEMEERDVITWNMILGAYVERDMAKEAVRLFRRMIAEG 474

Query: 733 TRRNSF 738
           T  NS 
Sbjct: 475 TEPNSI 480



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/216 (21%), Positives = 102/216 (47%), Gaps = 3/216 (1%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKL 97
            EA+ +   +  +G +    T+  +L AC    S+   R++H  +     + ++FV   L
Sbjct: 461 KEAVRLFRRMIAEGTEPNSITWTTMLGACAGEASLAEGRRVHELIAERGADSELFVGNAL 520

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           + ++ KC  L  AR+ FE +R ++  +W+ ++ A +++    E ++ F  M ++G+ P D
Sbjct: 521 VDMFGKCASLGGARQAFERIRAKDASSWNVLVAALAQNGDAEEALKQFLRMQREGIKPTD 580

Query: 158 FLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
             F  +  AC + G  E  K +  SL    G++ +    + +  +  + G L  A    +
Sbjct: 581 VTFIVVFWACSHAGRLEQAKTIFASLRHDYGIAPLPSHYSGMTDLLGRAGFLDEAEEVIK 640

Query: 217 SMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCR 251
            +   +D + W +++S     G+ +   ++  ++ R
Sbjct: 641 RIPFSRDELPWMTLLSACKVHGDVERGRKVAGQVLR 676


>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 204/606 (33%), Positives = 311/606 (51%), Gaps = 57/606 (9%)

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
           D ++++  R+E+     + F W  M+  + Q+    +AL L+K M    V P+  T    
Sbjct: 80  DYSLQIFDRIEN----SNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLV 135

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           + AC        G EIH   +K+GF                               D DV
Sbjct: 136 VQACAVRLLEFGGKEIHDHVLKVGF-------------------------------DSDV 164

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED---EAVDL 451
           Y  N++I  Y   G    A +LF    ES V  +V +WN +++GY++ G+     EA  L
Sbjct: 165 YVQNTLINMYAVCGNMRDARKLF---DESPVLDSV-SWNSILAGYVKKGDMGQVMEAWKL 220

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           F  M + D V     SW++LI+GY+Q G    AL +F +M ++    + V ++SVL ACA
Sbjct: 221 FNEMDEKDMV-----SWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACA 275

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLI----DTYAKSGNIVYSRTIFDGMSSKDII 567
           +L      K IHG V+R  +ES + + N+LI    D Y K G +  +  +F+GM  K + 
Sbjct: 276 HLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVS 335

Query: 568 TWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI 627
           +WN+LI G  ++G    +LD+F +MK+ G+ PN  TF+ ++ A    G+VD G+  F S+
Sbjct: 336 SWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASM 395

Query: 628 TECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDL 687
            E + I P ++HY  M+DL GR+G L EA + IE MP+ PD + W ALL AC+ HG+ ++
Sbjct: 396 IEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEM 455

Query: 688 AVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN 747
                 +L +L+P       L+  I+A  G  ED L+VR + ++     + G   IE   
Sbjct: 456 GERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANG 515

Query: 748 LVYTFVTGGWSESYSDLLYSWLQNVP-----ENVTARSSHSGLCIEEEEKEEISGIHSEK 802
           +V+ F+ G  +  + + +   L  +      E     ++   L I+EEEKE     HSEK
Sbjct: 516 VVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEK 575

Query: 803 LALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQC 862
           LA+AF L+  S  P  IRI+KN+R+C  CH  AK +S  +  EI + D    H+FK G C
Sbjct: 576 LAIAFGLLTIS-PPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGAC 634

Query: 863 SCGDYW 868
           SC DYW
Sbjct: 635 SCMDYW 640



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 232/490 (47%), Gaps = 63/490 (12%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI------- 89
           +LN+  + L S        +    +++L+       +H    L  F  +++++       
Sbjct: 5   KLNQLSSALKSTFNHKPTFKPTITLSILET-----HLHNCHNLKQFNRILSQMILTGFIS 59

Query: 90  DVFVKTKLL--SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           D F  ++LL  S  +    LD + ++F+ +   N + W+ M+ AY +     + + L+ L
Sbjct: 60  DTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKL 119

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
           MV++ + PD++ +P ++QAC        GK +H  V+K+G      V+N+++ +Y  CG 
Sbjct: 120 MVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGN 179

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQ---IGENDEAHRLFDKMCREEIKLGVVTFNIL 264
           +  AR+ F+     D V+WNS+++GY +   +G+  EA +LF++M  +++    V+++ L
Sbjct: 180 MRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDM----VSWSAL 235

Query: 265 IRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
           I  Y Q                                   NG   +AL +F EM+  G+
Sbjct: 236 ISGYEQ-----------------------------------NGMYEEALVMFIEMNANGM 260

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS----KCEELE 380
             + V + S +SAC  L  +  G  IH L ++MG    V + N+LI+MYS    KC  +E
Sbjct: 261 RLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVE 320

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
            A  VF+ +++K V SWN++I G    G   ++ ++F +M+ + V PN IT+  ++    
Sbjct: 321 NALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACR 380

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
             G  DE    F  M +   ++ N   +  ++    + G  N A  +   M  +   P+ 
Sbjct: 381 HMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMA---PDV 437

Query: 501 VTILSVLPAC 510
            T  ++L AC
Sbjct: 438 ATWGALLGAC 447



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 152/332 (45%), Gaps = 43/332 (12%)

Query: 59  TYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED- 116
           TY  ++QAC         +++H   L +  + DV+V+  L+++YA CG + DAR++F++ 
Sbjct: 131 TYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDES 190

Query: 117 ---------------------------------MRERNLYTWSAMIGAYSRDQRWREVVE 143
                                            M E+++ +WSA+I  Y ++  + E + 
Sbjct: 191 PVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALV 250

Query: 144 LFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA--- 200
           +F  M  +G+  D+ +   +L AC +    + GK++H LVI++G+     ++N+++    
Sbjct: 251 MFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYS 310

Query: 201 -VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
            +Y+KCG +  A   F  M+EK   +WN++I G    G  + +  +F +M    +    +
Sbjct: 311 DMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEI 370

Query: 260 TFNILIRSYNQLGQCDVAM-EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
           TF  ++ +   +G  D         +E  GI P+V  + CM+    + G  ++A  L + 
Sbjct: 371 TFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIES 430

Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           M      P+  T  + + AC       MG  +
Sbjct: 431 MPMA---PDVATWGALLGACKKHGDTEMGERV 459



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 129/267 (48%), Gaps = 12/267 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG   EA+ +   +   G ++     +++L AC   + +   + +H   + +  E  V +
Sbjct: 242 NGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNL 301

Query: 94  KTKLLSVYA----KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           +  L+ +Y+    KCGC+++A EVF  M E+ + +W+A+I   + +      +++F  M 
Sbjct: 302 QNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMK 361

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKL-MHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
            +G+ P++  F  +L AC + G  + G+    S++ K G+    +    ++ +  + G L
Sbjct: 362 NNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLL 421

Query: 209 IWARRFFESMDEKDGVA-WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
             A +  ESM     VA W +++    + G+ +   R+  K+   E++     F++L+ +
Sbjct: 422 NEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLI--ELQPDHDGFHVLLSN 479

Query: 268 -YNQLGQCDVAMEMVKRMESLGI--TP 291
            +   G  +  +E+   M+  G+  TP
Sbjct: 480 IFASKGDWEDVLEVRGMMKQQGVVKTP 506


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 192/602 (31%), Positives = 311/602 (51%), Gaps = 50/602 (8%)

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           G  + A+E+  ++      PD + +  +  G+ +       + ++  M    V PN  T 
Sbjct: 68  GDLNYALEVFDKIPH----PDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTY 123

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
              I AC    A+  G +IH+  +K GF  D    N+LI+MY   + LE A RVFD +  
Sbjct: 124 PPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQ 183

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDL 451
           +DV                                   ++W  LI+GY Q G  D+A ++
Sbjct: 184 RDV-----------------------------------VSWTSLITGYSQWGFVDKAREV 208

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           F+ M      +RN+ SWN++IA Y Q  + + A  +F +M+      +     S+L AC 
Sbjct: 209 FELM-----PERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACT 263

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
            L A  + K IHG + +  +E    +  ++ID Y K G +  +  +F+ +  K I +WN 
Sbjct: 264 GLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNC 323

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
           +I G  +HG   AA++LF +M+   + P+  TF++++ A + +G+V+ GK  F  +TE  
Sbjct: 324 MIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVL 383

Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
            + P +EH+  M+DL GR+G LEEA + I +MP+ PD+ +  AL+ ACRIHGN +L    
Sbjct: 384 GLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQI 443

Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
            +++ +LEP +     L+  +YA  G+ ED  KVRKL  +   + + G   IE ++ V  
Sbjct: 444 GKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDE 503

Query: 752 FVTGGWSESYSDLLYSWLQNVPENVTA---RSSHSGLC--IEEEEKEEISGIHSEKLALA 806
           F+ GG +   +  +Y+ L  + E + +        G+   I+EEEKE     HSEKLA+A
Sbjct: 504 FIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDIDEEEKENPLYYHSEKLAIA 563

Query: 807 FALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGD 866
           F L+  ++   T+RI KN+R+C  CH+ +K +S ++  EI + D    HHF+ G CSC D
Sbjct: 564 FGLL-KTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIRDRNRFHHFRMGGCSCKD 622

Query: 867 YW 868
           YW
Sbjct: 623 YW 624



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 169/375 (45%), Gaps = 43/375 (11%)

Query: 83  LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
           L L  + D   +       +K G L+ A EVF+ +   + Y ++ +   Y R Q  R  +
Sbjct: 46  LGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCI 105

Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGDF--EAGKLMHSLVIKLGMSCVRRVRNSVLA 200
            ++  M+   + P+ F +P +++AC  C D+  E GK +H+ V+K G             
Sbjct: 106 FMYSRMLHKSVSPNKFTYPPLIRAC--CIDYAIEEGKQIHAHVLKFGFGA---------- 153

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
                                DG + N++I  Y      ++A R+FD M + +    VV+
Sbjct: 154 ---------------------DGFSLNNLIHMYVNFQSLEQARRVFDNMPQRD----VVS 188

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
           +  LI  Y+Q G  D A E+ + M       +  +W  MI+ + Q+ R  +A  LF  M 
Sbjct: 189 WTSLITGYSQWGFVDKAREVFELMPER----NSVSWNAMIAAYVQSNRLHEAFALFDRMR 244

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
              V+ +     S +SACT L AL  G  IH    K G   D  +  ++I+MY KC  LE
Sbjct: 245 LENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLE 304

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
            A  VF+ +  K + SWN MI G    G    A ELF +M+   V P+ IT+  ++S   
Sbjct: 305 KASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACA 364

Query: 441 QNGNEDEAVDLFQRM 455
            +G  +E    FQ M
Sbjct: 365 HSGLVEEGKHYFQYM 379



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 161/337 (47%), Gaps = 14/337 (4%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
           NL+   ++  S+  AR++  F N+  + DV   T L++ Y++ G +D AREVFE M ERN
Sbjct: 160 NLIHMYVNFQSLEQARRV--FDNM-PQRDVVSWTSLITGYSQWGFVDKAREVFELMPERN 216

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
             +W+AMI AY +  R  E   LF  M  + +  D F+   +L AC   G  E GK +H 
Sbjct: 217 SVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHG 276

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
            + K G+    ++  +V+ +Y KCG L  A   F  + +K   +WN MI G    G+ + 
Sbjct: 277 YIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEA 336

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMI 300
           A  LF +M RE +    +TF  ++ +    G  +      + M E LG+ P +  + CM+
Sbjct: 337 AIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMV 396

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
               + G   +A  L  EM    V P+   + + + AC       +G +I    +++   
Sbjct: 397 DLLGRAGLLEEARKLINEMP---VNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPH 453

Query: 361 DD---VLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           +    VL    L N+Y+     E   +V  ++ D+ V
Sbjct: 454 NSGRYVL----LANLYASAGRWEDVAKVRKLMNDRGV 486



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 6/158 (3%)

Query: 37  RLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKT 95
           RL+EA  + D +  +   + +    ++L AC    ++   + +H ++     E+D  + T
Sbjct: 232 RLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLAT 291

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            ++ +Y KCGCL+ A EVF ++ ++ + +W+ MIG  +   +    +ELF  M ++ + P
Sbjct: 292 TVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAP 351

Query: 156 DDFLFPKILQACGNCGDFEAGK-----LMHSLVIKLGM 188
           D   F  +L AC + G  E GK     +   L +K GM
Sbjct: 352 DGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGM 389



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 38/280 (13%)

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           ++G+ + A+++F ++   D        +N++  GY +     N + ++ +M      PN 
Sbjct: 66  KSGDLNYALEVFDKIPHPD-----AYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNK 120

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
            T   ++ AC    A  + K+IH  VL+    +    +N+LI  Y    ++  +R +FD 
Sbjct: 121 FTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDN 180

Query: 561 MSSKDIITWNSLICGYVLHGF------------------W-------------HAALDLF 589
           M  +D+++W SLI GY   GF                  W             H A  LF
Sbjct: 181 MPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALF 240

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
           D+M+   +  ++    S++ A +  G ++ GK +   I E   I    +  + +ID+Y +
Sbjct: 241 DRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYI-EKSGIELDSKLATTVIDMYCK 299

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
            G LE+A E   ++P +  SS W  ++    +HG  + A+
Sbjct: 300 CGCLEKASEVFNELPQKGISS-WNCMIGGLAMHGKGEAAI 338



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 86/185 (46%), Gaps = 8/185 (4%)

Query: 518 KVKEIHGCVLRRSLESSLPVMNSLID--TYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
           ++K+ H  ++R  L +    M  +I     +KSG++ Y+  +FD +   D   +N++  G
Sbjct: 35  ELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRG 94

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
           Y+        + ++ +M    + PN+ T+  +I A  +   ++ GK++   + + +    
Sbjct: 95  YLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLK-FGFGA 153

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
                + +I +Y     LE+A    ++MP + D   W +L+T     G +D A      +
Sbjct: 154 DGFSLNNLIHMYVNFQSLEQARRVFDNMP-QRDVVSWTSLITGYSQWGFVDKA----REV 208

Query: 696 FDLEP 700
           F+L P
Sbjct: 209 FELMP 213


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 214/686 (31%), Positives = 343/686 (50%), Gaps = 65/686 (9%)

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
           L P +L+AC N    + GKL+H  V+ LG+     +  +++ +Y+ C     A+  F++M
Sbjct: 6   LLP-LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNM 64

Query: 219 DEKDGVA-WNSMISGYFQIGENDEAHRLFDKMCREE-IKLGVVTFNILIRS--------- 267
           +    ++ WN +++GY +     EA  LF+K+     +K    T+  ++++         
Sbjct: 65  ENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVL 124

Query: 268 ----YNQLGQCDVAMEMVKRMESLGI------------------TPDVFTWTCMISGFAQ 305
               +  L +  + M++V     +G+                    DV  W  +IS + Q
Sbjct: 125 GKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQ 184

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
           +G   +AL+ F  M   G  PN VTIT+AIS+C  L  L  GMEIH   +  GF  D  +
Sbjct: 185 SGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFI 244

Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
            ++L++MY KC  LE A  VF+ +  K V +WNSMI+GY   G      +LF +M    V
Sbjct: 245 SSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGV 304

Query: 426 PPNVITWNVLI---------------SGY-IQNGNEDEA------VDLFQRMGKNDKV-- 461
            P + T + LI                GY I+N  + +       +DL+ + GK +    
Sbjct: 305 KPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAEN 364

Query: 462 ------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
                 K    SWN +I+GY   G+   ALG+F +M+ S   P+ +T  SVL AC+ L A
Sbjct: 365 IFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAA 424

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
             K +EIH  ++ + L+++  VM +L+D YAK G +  + ++F  +  +D+++W S+I  
Sbjct: 425 LEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITA 484

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
           Y  HG  + AL+LF +M    +KP+R TFL+I+ A   AG+VD G   F  +   Y IIP
Sbjct: 485 YGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIP 544

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMP-IEPDSSIWEALLTACRIHGNIDLAVLAIER 694
            +EHYS +IDL GR+G+L EA E ++  P I  D  +   L +ACR+H NIDL       
Sbjct: 545 RVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIART 604

Query: 695 LFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           L D +P D     L+  +YA   K ++   VR   +E   + + G  WIE+   +  F  
Sbjct: 605 LIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFV 664

Query: 755 GGWSESYSDLLYSWLQNVPENVTARS 780
              S  + +L++  L  + +++   S
Sbjct: 665 EDNSHLHLELVFKCLSYLSDHMEDES 690



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 157/576 (27%), Positives = 255/576 (44%), Gaps = 66/576 (11%)

Query: 59  TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           TY ++L+AC       L + +H   +     +D+ V + L+ +YAKC   + A  +F +M
Sbjct: 108 TYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEM 167

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            E+++  W+ +I  Y +   ++E +E F LM + G  P+       + +C    D   G 
Sbjct: 168 PEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGM 227

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H  +I  G      + ++++ +Y KCG L  A   FE M +K  VAWNSMISGY   G
Sbjct: 228 EIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKG 287

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILI----RSYNQLG-------------QCDV---- 276
           ++    +LF +M  E +K  + T + LI    RS   L              Q DV    
Sbjct: 288 DSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINS 347

Query: 277 ----------AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
                      +E+ + +  L     V +W  MISG+   G+  +AL LF EM    V P
Sbjct: 348 SLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEP 407

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           + +T TS ++AC+ L AL  G EIH+L ++    ++ +V  +L++MY+KC  ++ A  VF
Sbjct: 408 DAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVF 467

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
             +  +D+ SW SMI  Y   G    A ELF +M +S++ P+ +T+  ++S     G  D
Sbjct: 468 KCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVD 527

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           E    F +M     +      ++ LI     LG+       +  +Q +    + V +LS 
Sbjct: 528 EGCYYFNQMVNVYGIIPRVEHYSCLI---DLLGRAGRLHEAYEILQQNPEIRDDVELLST 584

Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI 566
           L                 C L R+++    +  +LID                     D 
Sbjct: 585 L--------------FSACRLHRNIDLGAEIARTLIDK-----------------DPDDS 613

Query: 567 ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
            T+  L   Y     W     +  +MK  GLK N G
Sbjct: 614 STYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPG 649


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 184/545 (33%), Positives = 291/545 (53%), Gaps = 50/545 (9%)

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           D+   N ++  Y    ++E+A   FD +  KD  SWN+MI+G+ Q G   +A ELF+ M 
Sbjct: 67  DIFSYNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMP 126

Query: 422 ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ------------------RMGK------ 457
                 N ++WN +ISGY+++G+ D A  LF+                  + GK      
Sbjct: 127 VR----NSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVAWTAMITGFMKFGKIELAEK 182

Query: 458 --NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
              +   +N  +WN++IAGY +  Q  N L +F++M  S F PN  ++ SVL  C+ L A
Sbjct: 183 YFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSA 242

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
               K++H  + +  +  ++    SL+  Y K G++  +  +F  M  KD++TWN++I G
Sbjct: 243 LKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISG 302

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
           Y  HG    AL LFD+M+  G+KP+  TF++++ A + AG VDLG + F S+   Y +  
Sbjct: 303 YAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEA 362

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
             +HY+ ++DL GR GKL EA++ I+ MP +P S+I+  LL ACRIH N++LA  A + L
Sbjct: 363 KPDHYTCVVDLLGRGGKLVEAVDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNL 422

Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
            +L+P        +  +YA   + +    VR+  ++N    + G  WIEVK++V+ F +G
Sbjct: 423 LNLDPESAAGYVQLANVYAAMNRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSG 482

Query: 756 GWSESYSDLLYSWLQNVPENVTARSSHSGLC------------IEEEEKEEISGIHSEKL 803
                  D ++  L  + E +        L             + EE+K++I   HSEKL
Sbjct: 483 -------DRIHPELAFIHEKLNELERKMRLAGYVPDLEYALHDVGEEQKKQILLRHSEKL 535

Query: 804 ALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCS 863
           A+A+ LI        IR+ KN+R+C  CH   KY+S +    I + D+   HHF+ G+CS
Sbjct: 536 AIAYGLIRMPLGT-PIRVFKNLRVCGDCHSATKYISAIEGRVIIVRDTTRFHHFRQGECS 594

Query: 864 CGDYW 868
           CGDYW
Sbjct: 595 CGDYW 599



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 216/422 (51%), Gaps = 20/422 (4%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           +V    ++++ + + G L+ A  VFE M  +   TW++M+  YS  +   +V    F  +
Sbjct: 4   NVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRI 63

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLM-HSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
            +   PD F +  +L    +  D E+ +L    + +K   S      N++++ + + G +
Sbjct: 64  PE---PDIFSYNIMLACYLHNADVESARLFFDQMPVKDTASW-----NTMISGFSQNGMM 115

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             AR  F  M  ++ V+WN+MISGY + G+ D A +LF+          VV +  +I  +
Sbjct: 116 DQARELFLVMPVRNSVSWNAMISGYVESGDLDLAKQLFEVAPVRS----VVAWTAMITGF 171

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
            + G+ ++A +  + M       ++ TW  MI+G+ +N +    L LFK M   G  PN 
Sbjct: 172 MKFGKIELAEKYFEEMP----MKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNP 227

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            +++S +  C++L AL +G ++H L  K   + ++  G SL++MY KC +LE A ++F +
Sbjct: 228 SSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLV 287

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           +  KDV +WN+MI+GY Q G   KA  LF KM++  + P+ IT+  ++S     G  D  
Sbjct: 288 MPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLG 347

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
           ++ F  M ++  V+     +  ++    + G+   A+ + +KM    F P+     ++L 
Sbjct: 348 IEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEAVDLIKKMP---FKPHSAIFGTLLG 404

Query: 509 AC 510
           AC
Sbjct: 405 AC 406



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 170/339 (50%), Gaps = 20/339 (5%)

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC-QAGYCGKAYELFI 418
           + +V+  N +I  + +  +L +A RVF+ +  K   +WNSM+AGY  + G    A +LF 
Sbjct: 2   SSNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFD 61

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
           ++ E    P++ ++N++++ Y+ N + + A   F +M   D     TASWN++I+G+ Q 
Sbjct: 62  RIPE----PDIFSYNIMLACYLHNADVESARLFFDQMPVKD-----TASWNTMISGFSQN 112

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           G  + A  +F  M       N V+  +++         +  K++      RS+ +     
Sbjct: 113 GMMDQARELFLVMPVR----NSVSWNAMISGYVESGDLDLAKQLFEVAPVRSVVA----W 164

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
            ++I  + K G I  +   F+ M  K+++TWN++I GY+ +      L LF +M   G +
Sbjct: 165 TAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFR 224

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
           PN  +  S++L  S    + LGK+V   I +   +   I   ++++ +Y + G LE+A +
Sbjct: 225 PNPSSLSSVLLGCSNLSALKLGKQVHQLICKS-PVSWNITAGTSLLSMYCKCGDLEDAWK 283

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
               MP + D   W A+++    HG  + A+   +++ D
Sbjct: 284 LFLVMP-QKDVVTWNAMISGYAQHGAGEKALYLFDKMRD 321



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 158/360 (43%), Gaps = 59/360 (16%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDS-NSIHLARKLHAFLNLVTEIDVFV 93
           +G LN A+ V +S+  +       T+ ++L    +    I +AR+L    + + E D+F 
Sbjct: 18  SGDLNSALRVFESMTVKTTV----TWNSMLAGYSNRRGKIKVARQL---FDRIPEPDIFS 70

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              +L+ Y     ++ AR  F+ M  ++  +W+ MI  +S++    +  ELF +M     
Sbjct: 71  YNIMLACYLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMP---- 126

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR--NSVLAVYVKCGKLIWA 211
             +   +  ++      GD +  K +  +      + VR V    +++  ++K GK+  A
Sbjct: 127 VRNSVSWNAMISGYVESGDLDLAKQLFEV------APVRSVVAWTAMITGFMKFGKIELA 180

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM---------------------- 249
            ++FE M  K+ V WN+MI+GY +  + +   +LF +M                      
Sbjct: 181 EKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNL 240

Query: 250 -------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                        C+  +   +     L+  Y + G  + A ++   M       DV TW
Sbjct: 241 SALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKCGDLEDAWKLFLVMPQ----KDVVTW 296

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
             MISG+AQ+G   +AL LF +M   G+ P+ +T  + +SAC     + +G+E  +  V+
Sbjct: 297 NAMISGYAQHGAGEKALYLFDKMRDEGMKPDWITFVAVLSACNHAGFVDLGIEYFNSMVR 356


>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  317 bits (811), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 207/664 (31%), Positives = 333/664 (50%), Gaps = 74/664 (11%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           + L+  Y + G  + A  + + M       +V  WT ++ GF QN +   A+ +F+EM +
Sbjct: 103 SFLVNVYAKCGNMEDARRVFENMPRR----NVVAWTTLMVGFVQNSQPKHAIHVFQEMLY 158

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
            G  P+  T+++ + AC+ L++L +G + H+  +K     D  VG++L ++YSKC  LE 
Sbjct: 159 AGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLED 218

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW--------- 432
           A + F  I++K+V SW S ++     G   K   LF++M   D+ PN  T          
Sbjct: 219 ALKAFSRIREKNVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCE 278

Query: 433 --------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                     N L+  Y+++G   EA   F RM   D V  +  
Sbjct: 279 IPSLELGTQVCSLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRM---DDV--SMV 333

Query: 467 SWNSLIAGYQQLGQ--KNN---------ALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
           +WN++IAG+ Q+ +  K+N         AL +F K+  S   P+  T+ SVL  C+ ++A
Sbjct: 334 TWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLA 393

Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
             + ++IH   ++    S + V  SLI  Y K G+I  +   F  MS++ +I W S+I G
Sbjct: 394 IEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITG 453

Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
           +  HG    AL +F+ M   G++PN  TF+ ++ A S AGMV      F  + + Y+I P
Sbjct: 454 FSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKP 513

Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
           +++HY  M+D++ R G+LE+A+ FI+ M  EP   IW   +  CR HGN++L   A E+L
Sbjct: 514 VMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQL 573

Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
             L+P D     L+L +Y    + +D  +VRK+             WI +K+ VY+F T 
Sbjct: 574 LSLKPKDPETYVLLLNMYLSADRFDDVSRVRKMMEVEKVGKLKDWSWISIKDKVYSFKTN 633

Query: 756 GWSESYSDLLYSWLQNVPENVTARSSHSGLCI----------EEEEKEEISGIHSEKLAL 805
             +   S L+   L    E++ A++ + G  +          EEE+    +  HSEKLA+
Sbjct: 634 DKTHPPSSLICKSL----EDLLAKAKNLGYEMLESVEISDEEEEEKTSSPTIYHSEKLAI 689

Query: 806 AFALIGSSQAPHT--IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCS 863
            F L      P++  IR+VK+  +C   H   K VS +   EI + DSK LH F NG+CS
Sbjct: 690 TFGL---ENLPNSSPIRVVKSTLICRDSHNFIKCVSTLTGREIIVKDSKRLHKFVNGECS 746

Query: 864 CGDY 867
           CG++
Sbjct: 747 CGNF 750



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/552 (27%), Positives = 257/552 (46%), Gaps = 75/552 (13%)

Query: 1   FFIWILTTFQQLHSLLTKKSNPRF--------------RDTHLDFLCGNGRLNEAITVLD 46
           FF   +T   +LH    K S   +              R THLDF        EA+ +L+
Sbjct: 4   FFSSAVTATLKLHPQFPKYSPSSYPPEKGQSISFQKSHRFTHLDF-------GEAL-LLN 55

Query: 47  SIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCG 105
              T+  +  +  Y+ LLQ C+D  S    + +H   +      + FV + L++VYAKCG
Sbjct: 56  KEGTE--EEEKLFYVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCG 113

Query: 106 CLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQ 165
            ++DAR VFE+M  RN+  W+ ++  + ++ + +  + +F  M+  G +P  +    +L 
Sbjct: 114 NMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLH 173

Query: 166 ACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA 225
           AC +    + G   H+ +IK  +     V +++ ++Y KCG+L  A + F  + EK+ ++
Sbjct: 174 ACSSLQSLKLGDQFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVIS 233

Query: 226 WNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------------ 261
           W S +S     G   +  RLF +M  E+IK    T                         
Sbjct: 234 WTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCI 293

Query: 262 -----------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN---- 306
                      N L+  Y + G    A     RM+ + +     TW  MI+G AQ     
Sbjct: 294 KFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMV----TWNAMIAGHAQMMELT 349

Query: 307 -------GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
                   R S+AL +F +++  G+ P+  T++S +S C+ + A+  G +IH+  +K GF
Sbjct: 350 KDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGF 409

Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
             DV+V  SLI+MY+KC  +E A + F  +  + + +W SMI G+ Q G   +A  +F  
Sbjct: 410 LSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFED 469

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M  + V PN +T+  ++S     G   +A++ F+ M K  K+K     +  ++  + +LG
Sbjct: 470 MSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLG 529

Query: 480 QKNNALGVFRKM 491
           +   AL   +KM
Sbjct: 530 RLEQALNFIKKM 541



 Score = 69.3 bits (168), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 98/196 (50%), Gaps = 12/196 (6%)

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           +HG V++     +  VM+ L++ YAK GN+  +R +F+ M  ++++ W +L+ G+V +  
Sbjct: 86  VHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQ 145

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
              A+ +F +M   G  P+  T  +++ A S    + LG +    I + Y +       S
Sbjct: 146 PKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYIIK-YHLDFDTSVGS 204

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF----- 696
           A+  LY + G+LE+A++    +  E +   W + ++AC  +G    A +   RLF     
Sbjct: 205 ALCSLYSKCGRLEDALKAFSRIR-EKNVISWTSAVSACGDNG----APVKGLRLFVEMIS 259

Query: 697 -DLEPGDVLIQRLILQ 711
            D++P +  +   + Q
Sbjct: 260 EDIKPNEFTLTSALSQ 275


>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 183/532 (34%), Positives = 283/532 (53%), Gaps = 15/532 (2%)

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
           K ++  ++IH++  + G     ++   L   Y+    L+ +  +F   ++  V+ W ++I
Sbjct: 41  KTISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAII 100

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
            G+   G    A +LF  M E     ++++   +++ Y ++G  D A  LF  M + D V
Sbjct: 101 HGHALRGDVVSAQQLFDTMPEK----SLVSLTAMLTCYAKHGELDAARVLFDGMEERDGV 156

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
                 WN +I GY Q G  N AL +FR+M  +   PN VT+LSVL AC  L A    + 
Sbjct: 157 -----CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRW 211

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           +H  +    ++ ++ V  +L+D Y+K G++  +R +FD +  KD++ WNS+I GY +HGF
Sbjct: 212 VHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGF 271

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
              AL LF  M   GL P   TF+ I+ A   +G V  G  +F  + + Y I P IEHY 
Sbjct: 272 SQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYG 331

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            M++L GR+G +E+A E +++M IEPD  +W  LL ACR+HG I L    +E L D    
Sbjct: 332 CMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLA 391

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
           +     L+  IYA  G  +   ++R + +++  +   G   IEV N V+ F+ GG +   
Sbjct: 392 NSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPK 451

Query: 762 SDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAP 816
              +Y  L+ +         T ++      I E EKE    +HSEKLA+AF LI ++Q  
Sbjct: 452 RKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLI-NTQPG 510

Query: 817 HTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            TI+IVKN+R+C  CHE  K +S +   +I + D    HHF NG CSCGDYW
Sbjct: 511 TTIKIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 562



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 156/332 (46%), Gaps = 11/332 (3%)

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H+++ + G+     +   +   Y   G+L ++   F          W ++I G+   G+
Sbjct: 49  IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGD 108

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
              A +LFD M  + +    V+   ++  Y + G+ D A  +   ME      D   W  
Sbjct: 109 VVSAQQLFDTMPEKSL----VSLTAMLTCYAKHGELDAARVLFDGMEE----RDGVCWNV 160

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           MI G+ QNG  ++AL LF+ M      PN VT+ S +SAC  L AL  G  +HS     G
Sbjct: 161 MIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNG 220

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              +V VG +L++MYSKC  LE A  VFD I DKDV +WNSMI GY   G+  +A +LF 
Sbjct: 221 IQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFK 280

Query: 419 KMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
            M    + P  IT+  ++S    +G   E  D+F +M     ++     +  ++    + 
Sbjct: 281 SMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRA 340

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           G    A  + + M      P+ V   ++L AC
Sbjct: 341 GHVEQAYELVKNMN---IEPDPVLWGTLLGAC 369



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 154/303 (50%), Gaps = 9/303 (2%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T +L+ YAK G LD AR +F+ M ER+   W+ MI  Y+++    E + LF  M++    
Sbjct: 128 TAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAK 187

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P++     +L ACG  G  E+G+ +HS +   G+     V  +++ +Y KCG L  AR  
Sbjct: 188 PNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLV 247

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
           F+ +D+KD VAWNSMI GY   G + EA +LF  MCR  +    +TF  ++ +    G  
Sbjct: 248 FDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHSGWV 307

Query: 275 DVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
               ++  +M +  GI P +  + CM++   + G   QA +L K M+   + P+ V   +
Sbjct: 308 TEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMN---IEPDPVLWGT 364

Query: 334 AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDMIKD 391
            + AC     +A+G +I  L V     +    G  ++  N+Y+     +   R+  M+KD
Sbjct: 365 LLGACRLHGKIALGEKIVELLVDQNLANS---GTYILLSNIYAAVGNWDGVARLRTMMKD 421

Query: 392 KDV 394
             V
Sbjct: 422 SGV 424



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 128/267 (47%), Gaps = 4/267 (1%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVT 87
           +D    NG  NEA+ +   +    AK    T +++L AC    ++   R +H+++ N   
Sbjct: 162 IDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGI 221

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + +V V T L+ +Y+KCG L+DAR VF+ + ++++  W++MI  Y+     +E ++LF  
Sbjct: 222 QFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKS 281

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M + GL P +  F  IL ACG+ G    G  + + +  + G+         ++ +  + G
Sbjct: 282 MCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAG 341

Query: 207 KLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            +  A    ++M+ E D V W +++      G+     ++ + +  + +     T+ +L 
Sbjct: 342 HVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLA-NSGTYILLS 400

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPD 292
             Y  +G  D    +   M+  G+  +
Sbjct: 401 NIYAAVGNWDGVARLRTMMKDSGVKKE 427


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 223/746 (29%), Positives = 342/746 (45%), Gaps = 115/746 (15%)

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDG 223
           LQ+CG  GD   G+ +H+ ++  G +      ++ LA                       
Sbjct: 24  LQSCGRAGDLRLGRCLHARLVLSGAAAA----STFLA----------------------- 56

Query: 224 VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKR 283
              N +I+ Y    +   A RLFD M R                                
Sbjct: 57  ---NHLITMYSHCADVPSAVRLFDAMPR-------------------------------- 81

Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
                  P++ +WT ++SG  QN     AL  F  M   G++P    ++SA  A   L A
Sbjct: 82  -------PNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAA 134

Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
              G ++H + V++GF  ++ V ++L +MYSK   L  A RVFD +  KD  +W +MI G
Sbjct: 135 RHAGAQLHCVGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDG 194

Query: 404 YCQAGYCGKAYELFIKMQ------------------------------------ESDVPP 427
           Y + G    A   F  M+                                    +S    
Sbjct: 195 YAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQ 254

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
            V   N L   Y +  + D A     R+ K D+   N  S  SLI GY +      AL +
Sbjct: 255 EVAVRNALTDMYAKAADMDNAA----RVVKIDQGSLNVVSATSLIDGYIETDCIEKALLM 310

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           F +++     PN  T  S++  CA      +  ++H  V++ SL S   V ++L+D Y K
Sbjct: 311 FIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGK 370

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
            G I  S  +F  +     I WN+ I     HG    A+  FD+M S G++PN  TF+S+
Sbjct: 371 CGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSL 430

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           + A S AG+VD G K F S+ + + I P  EHYS +ID+YGR+G+L+EA +FI +MP++P
Sbjct: 431 LTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKP 490

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
           ++  W +LL ACR+ GN +L  +A + +  LEP +  +   +  IYA  G+ ED   VRK
Sbjct: 491 NAYGWCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRK 550

Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTAR-----SSH 782
           L R+N  +   G  W++     + F +  WS    + +Y  L+ + E +        +  
Sbjct: 551 LMRDNRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRF 610

Query: 783 SGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMH 842
               +E+  K+ I   HSE++A+AFALI S  A   I + KN+R+C  CH   K++S + 
Sbjct: 611 LPCNLEDTAKQRILRYHSERIAVAFALI-SMPATKPIIVKKNLRICADCHSALKFISKVE 669

Query: 843 HCEIFLADSKCLHHFKNGQCSCGDYW 868
           + +I + D+   HHF  G CSCGDYW
Sbjct: 670 NRDIIVRDNSRFHHFVKGGCSCGDYW 695



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 126/485 (25%), Positives = 210/485 (43%), Gaps = 44/485 (9%)

Query: 64  LQACIDSNSIHLARKLHAFLNL--VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
           LQ+C  +  + L R LHA L L        F+   L+++Y+ C  +  A  +F+ M   N
Sbjct: 24  LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPN 83

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
           L +W+ ++   +++   R+ +  F  M + GL P  F      +A        AG  +H 
Sbjct: 84  LVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHC 143

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
           + ++LG      V +++  +Y K G L+ A R F+ M +KD VAW +MI GY + G  + 
Sbjct: 144 VGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEA 203

Query: 242 AHRLFDKMCREEI--------------------------------KLG----VVTFNILI 265
           A   F  M RE +                                K G    V   N L 
Sbjct: 204 AVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALT 263

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
             Y +    D A  +VK  +    + +V + T +I G+ +     +AL +F E+   GV 
Sbjct: 264 DMYAKAADMDNAARVVKIDQG---SLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVE 320

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           PN  T +S I  C     L  G ++H+  +K     D  V ++L++MY KC  +  + ++
Sbjct: 321 PNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQL 380

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
           F  I+     +WN+ I    Q G+  +A   F +M  S + PN IT+  L++     G  
Sbjct: 381 FKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLV 440

Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
           DE +  F  M  +  ++     ++ +I  Y + G+ + A     +M      PN     S
Sbjct: 441 DEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMP---VKPNAYGWCS 497

Query: 506 VLPAC 510
           +L AC
Sbjct: 498 LLGAC 502



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 171/378 (45%), Gaps = 13/378 (3%)

Query: 29  LDFLCGNGRLNEAITVLDSIATQG-AKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLV 86
           +D    NG L  A+     +  +G     ++   ++L A        LAR +H+  +   
Sbjct: 192 IDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSG 251

Query: 87  TEIDVFVKTKLLSVYAKCGCLDDAREVFE-DMRERNLYTWSAMIGAYSRDQRWREVVELF 145
            E +V V+  L  +YAK   +D+A  V + D    N+ + +++I  Y       + + +F
Sbjct: 252 FEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMF 311

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             + + G+ P++F F  +++ C      E G  +H+ VIK  +     V +++L +Y KC
Sbjct: 312 IELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKC 371

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G +  + + F+ ++    +AWN+ I+   Q G   EA R FD+M    I+   +TF  L+
Sbjct: 372 GLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLL 431

Query: 266 RSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
            + +  G  D  ++    M +  GI P    ++C+I  + + GR  +A     EM    V
Sbjct: 432 TACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMP---V 488

Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
            PN     S + AC       +G EI +  +     D+  V  SL  +Y+   + E  + 
Sbjct: 489 KPNAYGWCSLLGACRMRGNKELG-EIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKA 547

Query: 385 VFDMIKDKDV-----YSW 397
           V  +++D  +     +SW
Sbjct: 548 VRKLMRDNRIKKLPGFSW 565



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 93/415 (22%), Positives = 185/415 (44%), Gaps = 45/415 (10%)

Query: 88  EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
           + ++FV + L  +Y+K G L +A  VF+ M +++   W+AMI  Y+++      V  F  
Sbjct: 151 DAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEAAVIAFRD 210

Query: 148 MVQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           M ++GL   D  +   +L A G   D    + +HS V+K G      VRN++  +Y K  
Sbjct: 211 MRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQEVAVRNALTDMYAKAA 270

Query: 207 KLIWARRFFE-SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
            +  A R  +      + V+  S+I GY +    ++A  +F ++ R+ ++    TF+ +I
Sbjct: 271 DMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVEPNEFTFSSMI 330

Query: 266 RS-----------------------------------YNQLGQCDVAMEMVKRMESLGIT 290
           +                                    Y + G   +++++ K +E     
Sbjct: 331 KGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQLFKEIE---YH 387

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME- 349
            D+  W   I+  AQ+G   +A+  F  M+  G+ PN +T  S ++AC+    +  G++ 
Sbjct: 388 TDI-AWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLVDEGLKY 446

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER-VFDMIKDKDVYSWNSMIAGYCQAG 408
            +S+    G        + +I+MY +   L+ AE+ + +M    + Y W S++ G C+  
Sbjct: 447 FYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLL-GACRMR 505

Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
              +  E+         P N    +V +SG   +  + E V   +++ +++++K+
Sbjct: 506 GNKELGEIAADNMMKLEPDNTGV-HVSLSGIYASLGQWEDVKAVRKLMRDNRIKK 559


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 203/725 (28%), Positives = 354/725 (48%), Gaps = 72/725 (9%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           ++S  A  G L DAR + + +R  +   W+A+I +YS+     EV  L+  M + GL P 
Sbjct: 264 IISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPT 323

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
              F  IL A  N   F+ G+ +H+  +K G+     V +S++ +YVK G +  A++ F+
Sbjct: 324 RSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFD 383

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------------- 261
              EK+ V WN+++ G+ Q    +E  ++F  M R +++    TF               
Sbjct: 384 FSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDL 443

Query: 262 --------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
                               N ++  Y++LG  DVA    K + SL    D  +W  +I 
Sbjct: 444 GRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVA----KALFSLIPVKDSVSWNALIV 499

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
           G A N    +A+++ K M F G+  + V+  +AI+AC+++ A+  G +IHS ++K     
Sbjct: 500 GLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCS 559

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           +  VG+SLI++YSK  ++E++ +V   +    +   N++I G  Q     +A ELF ++ 
Sbjct: 560 NHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVL 619

Query: 422 ESDVPPNVITWNVLISG--------------------YIQNGNEDEAVDLF--------- 452
           +    P+  T+  ++SG                     I N +    + L          
Sbjct: 620 KDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLL 679

Query: 453 ---QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
               ++ +     +N   W + I+GY Q G    +L +F +M+S     +  T  SVL A
Sbjct: 680 EDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKA 739

Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIIT 568
           C+ + A    KEIHG +++    S     ++L+D Y+K G+++ S  IF  + ++ +I+ 
Sbjct: 740 CSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMP 799

Query: 569 WNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSIT 628
           WNS+I G+  +G+ + AL LF +M+   +KP+  T L +++A S AG++  G   F S++
Sbjct: 800 WNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMS 859

Query: 629 ECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLA 688
           + Y I+P ++HY+ +IDL GR G L++A E I+ +P   D  IW   L AC++H + +  
Sbjct: 860 QVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEERG 919

Query: 689 VLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNL 748
            +A ++L ++EP        +  ++A  G   +A   R+  RE       G  WI V N 
Sbjct: 920 KVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNK 979

Query: 749 VYTFV 753
              FV
Sbjct: 980 QSVFV 984



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 154/582 (26%), Positives = 290/582 (49%), Gaps = 35/582 (6%)

Query: 128 MIGAYSRDQRWREVVELF-FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL 186
           ++  ++R    R+V++ F  +    G  PD F    +L AC   G  E G+ +H  V+K 
Sbjct: 127 VLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKS 186

Query: 187 GMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF 246
           G       +  ++ +Y KCG++  ARR F+ +   D + W SMI+GY ++G   +A  LF
Sbjct: 187 GFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALF 246

Query: 247 DKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQN 306
            +M +       VT   +I +   +G+   A  ++KR+    +T  V  W  +I+ ++Q+
Sbjct: 247 SRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIR---MTSTV-AWNAVIASYSQS 302

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           G  S+   L+K+M   G+MP   T  S +SA  ++ A   G +IH+ AVK G   +V VG
Sbjct: 303 GLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVG 362

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           +SLIN+Y K   +  A++VFD   +K++  WN+++ G+ Q     +  ++F  M+ +D+ 
Sbjct: 363 SSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLE 422

Query: 427 PNVITWNVLISG----------------YIQNGNE------DEAVDLFQRMGKNDKVK-- 462
            +  T+  ++                   I+NG +      +  +D++ ++G  D  K  
Sbjct: 423 ADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKAL 482

Query: 463 ------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
                 +++ SWN+LI G     ++  A+ + ++M+      + V+  + + AC+ + A 
Sbjct: 483 FSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAI 542

Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
              K+IH   ++ ++ S+  V +SLID Y+K G++  SR +   + +  I+  N+LI G 
Sbjct: 543 ETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGL 602

Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
           V +     A++LF Q+   G KP+  TF SI+   +      +GK+V C   +   +   
Sbjct: 603 VQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQD 662

Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
                +++ +Y +   LE+A + +E++P   +   W A ++ 
Sbjct: 663 TSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISG 704



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 153/711 (21%), Positives = 314/711 (44%), Gaps = 106/711 (14%)

Query: 63  LLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN 121
           +L AC    ++   R++H   L       VF +  L+ +YAKCG +DDAR +F+ +   +
Sbjct: 163 VLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPD 222

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
              W++MI  Y R  R+++ + LF  M + G  PD                         
Sbjct: 223 TICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQ------------------------ 258

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
                 ++CV     ++++     G+L  AR   + +     VAWN++I+ Y Q G + E
Sbjct: 259 ------VTCV-----TIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSE 307

Query: 242 AHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT------ 295
              L+  M ++ +     TF  ++ +   +   D   ++       G+  +VF       
Sbjct: 308 VFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLIN 367

Query: 296 -------------------------WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
                                    W  ++ GF QN    + + +F+ M    +  +  T
Sbjct: 368 LYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFT 427

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
             S + AC +L +L +G ++H + +K G   D+ V N++++MYSK   ++ A+ +F +I 
Sbjct: 428 FVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIP 487

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-----YIQNGNE 445
            KD  SWN++I G       G+A  +  +M+   +  + +++   I+       I+ G +
Sbjct: 488 VKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQ 547

Query: 446 -----------------DEAVDLFQRMGKNDKVKRNTA--------SWNSLIAGYQQLGQ 480
                               +DL+ + G  +  ++  A          N+LI G  Q  +
Sbjct: 548 IHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNR 607

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSL---ESSLPV 537
           ++ A+ +F+++    F P+  T  S+L  C   V+S   K++H   L+ ++   ++SL +
Sbjct: 608 EDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGI 667

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSS-KDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
             SL+  Y K   +  +  + + +   K+++ W + I GY  +G+   +L +F +M+S+ 
Sbjct: 668 --SLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYD 725

Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
           ++ +  TF S++ A S    +  GK++   I +    +      SA++D+Y + G +  +
Sbjct: 726 VRSDEATFTSVLKACSEMAALTDGKEIHGLIVKS-GFVSYETATSALMDMYSKCGDVISS 784

Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD--LEPGDVLI 705
            E  +++    +   W +++     +G  + A+L  +++ +  ++P DV +
Sbjct: 785 FEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTL 835



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 150/312 (48%), Gaps = 8/312 (2%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEI 89
           L  N R +EAI +   +   G K    T+ ++L  C    S  + +++H +   + +   
Sbjct: 602 LVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQ 661

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLM 148
           D  +   L+ +Y KC  L+DA ++ E++ + +NL  W+A I  Y+++    + + +F+ M
Sbjct: 662 DTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRM 721

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
               +  D+  F  +L+AC        GK +H L++K G        ++++ +Y KCG +
Sbjct: 722 RSYDVRSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDV 781

Query: 209 IWARRFFESMDEKDGV-AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           I +   F+ +  +  +  WNSMI G+ + G  +EA  LF KM   +IK   VT   ++ +
Sbjct: 782 ISSFEIFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIA 841

Query: 268 YNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            +  G     +     M  + GI P V  + C+I    + G   +A ++  ++ F     
Sbjct: 842 CSHAGLISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPF---RA 898

Query: 327 NGVTITSAISAC 338
           +GV   + ++AC
Sbjct: 899 DGVIWATYLAAC 910



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 120/558 (21%), Positives = 250/558 (44%), Gaps = 65/558 (11%)

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE--------------------- 216
           ++H+ +++LG+    R+ ++++ +Y + G++ +A R                        
Sbjct: 74  VLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHAR 133

Query: 217 -------------------SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLG 257
                              S  ++ G+A   ++S   ++G  +   ++   + +      
Sbjct: 134 SGSPRDVLDAFQRIRCSIGSTPDQFGIA--VVLSACSRLGALEHGRQVHCDVLKSGFCSS 191

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGIT-PDVFTWTCMISGFAQNGRTSQALDLF 316
           V     L+  Y + G+ D A  M       GI  PD   WT MI+G+ + GR  QAL LF
Sbjct: 192 VFCQAGLVDMYAKCGEVDDARRMFD-----GIACPDTICWTSMIAGYHRVGRYQQALALF 246

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
             M  +G +P+ VT  + IS    +  L    +  +L  ++  T  V   N++I  YS+ 
Sbjct: 247 SRMEKMGSVPDQVTCVTIISTLASMGRLG---DARTLLKRIRMTSTV-AWNAVIASYSQS 302

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP----PNVITW 432
                   ++  +K + +    S  A    A     A++   ++  + V      NV   
Sbjct: 303 GLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVG 362

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           + LI+ Y+++G   +A  +F     +   ++N   WN+++ G+ Q   +   + +F+ M+
Sbjct: 363 SSLINLYVKHGCISDAKKVF-----DFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMR 417

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
            +    +  T +SVL AC  L + +  +++H   ++  +++ L V N+++D Y+K G I 
Sbjct: 418 RADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAID 477

Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHS 612
            ++ +F  +  KD ++WN+LI G   +     A+++  +MK +G+  +  +F + I A S
Sbjct: 478 VAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACS 537

Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA---MEFIEDMPIEPDS 669
               ++ GK++  +  + Y +       S++IDLY + G +E +   +  ++   I P +
Sbjct: 538 NIWAIETGKQIHSASIK-YNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPIN 596

Query: 670 SIWEALLTACRIHGNIDL 687
           ++   L+   R    I+L
Sbjct: 597 ALITGLVQNNREDEAIEL 614



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/477 (22%), Positives = 209/477 (43%), Gaps = 44/477 (9%)

Query: 32  LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEID 90
           L  N    EAI +L  +   G  +   ++   + AC +  +I   +++H A +      +
Sbjct: 501 LAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSN 560

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
             V + L+ +Y+K G ++ +R+V   +   ++   +A+I    ++ R  E +ELF  +++
Sbjct: 561 HAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLK 620

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKLI 209
           DG  P +F F  IL  C        GK +H   +K   ++    +  S++ +Y+KC  L 
Sbjct: 621 DGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLE 680

Query: 210 WARRFFESM-DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS- 267
            A +  E + D K+ V W + ISGY Q G + ++  +F +M   +++    TF  ++++ 
Sbjct: 681 DANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKAC 740

Query: 268 ----------------------------------YNQLGQCDVAMEMVKRMESLGITPDV 293
                                             Y++ G    + E+ K +++     ++
Sbjct: 741 SEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKN---RQNI 797

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHS 352
             W  MI GFA+NG  ++AL LF++M    + P+ VT+   + AC+    ++ G+    S
Sbjct: 798 MPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFFDS 857

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIAGYCQAGYCG 411
           ++   G    V     LI++  +   L+ A+ V D +  + D   W + +A  CQ     
Sbjct: 858 MSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAA-CQMHKDE 916

Query: 412 KAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           +  ++  K      P +  T+  L S +   GN  EA    + M +   +K    SW
Sbjct: 917 ERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSW 973



 Score = 42.4 bits (98), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/181 (20%), Positives = 80/181 (44%), Gaps = 13/181 (7%)

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF---DGMSSKDIITWNSLICGYVL 578
           +H  +LR  L     + ++L+D Y +SG + Y+        G  +      + L C +  
Sbjct: 75  LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSC-HAR 133

Query: 579 HGFWHAALDLFDQMK-SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE---CYQII 634
            G     LD F +++ S G  P++     ++ A S  G ++ G++V C + +   C  + 
Sbjct: 134 SGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVF 193

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER 694
                 + ++D+Y + G++++A    + +   PD+  W +++      G    A+    R
Sbjct: 194 CQ----AGLVDMYAKCGEVDDARRMFDGIAC-PDTICWTSMIAGYHRVGRYQQALALFSR 248

Query: 695 L 695
           +
Sbjct: 249 M 249


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 196/652 (30%), Positives = 329/652 (50%), Gaps = 58/652 (8%)

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPD----VFTWTCMISGFAQNGRTSQALDLF 316
           F  L  +Y ++G  D A        +L  +P     +  W  +++  ++ G    AL +F
Sbjct: 47  FPSLAAAYARVGALDAAES------TLAASPSSRSCIPAWNALLAARSRAGSPGAALRVF 100

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
           + +      P+  T T A++AC  L  L     +   A   G+  DV V ++L+++YS+C
Sbjct: 101 RALP-SSARPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRC 159

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN-------- 428
             +  A RVFD +  KD  +W++M+AG+  AG   +A  ++ +M+E  V  +        
Sbjct: 160 GAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVI 219

Query: 429 ---------------------------VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
                                      V+    L+  Y +NG+ D A  +F+ M      
Sbjct: 220 QACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPY---- 275

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
            RN  SWN+LI+G+ Q G  + AL +FR+M +S   P+   ++S L ACA +      K 
Sbjct: 276 -RNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKS 334

Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
           IHG +LRR LE    +  +++D Y+K G++  +R +F+ +SS+D++ WN++I     HG 
Sbjct: 335 IHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGC 393

Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
            H AL LF ++   G+KP+  TF S++ A S +G+V+ GK  F  +   + I P  +H  
Sbjct: 394 GHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCV 453

Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
            ++DL  RSG +EEA E +  M  EP   IW ALL+ C  +  ++L     +++ + +P 
Sbjct: 454 CVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPE 513

Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
           D+ +  L+  +YA   K +   ++RKL +++  +   G   IEV    + FV    S   
Sbjct: 514 DIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFVMEDQSHPQ 573

Query: 762 SDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAP 816
              +   +  +   +       R+      ++E+ KE++   HSE+LA+AF L+ +S   
Sbjct: 574 HQEILKMISKLSFEMRKMGYVPRTEFVYHDLDEDVKEQLLSYHSERLAIAFGLLNTSPGT 633

Query: 817 HTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             + I+KN+R+C  CH+  KY+S +   EI + D+K  HHFK+G CSCGDYW
Sbjct: 634 RLV-IIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFKDGACSCGDYW 684



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 194/416 (46%), Gaps = 47/416 (11%)

Query: 78  KLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERN--LYTWSAMIGAYSRD 135
           +LHA L + +  ++F    L + YA+ G LD A             +  W+A++ A SR 
Sbjct: 33  RLHALLVVSSSQNLF--PSLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRA 90

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
                 + +F  +      PD   F   L AC   GD +A + +       G      V 
Sbjct: 91  GSPGAALRVFRALPSSAR-PDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVC 149

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------ 249
           +++L VY +CG +  A R F+ M  KD VAW++M++G+   G   EA  ++ +M      
Sbjct: 150 SALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVA 209

Query: 250 -----------------------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEM 280
                                         R  +++ VV    L+  Y + G  DVA ++
Sbjct: 210 EDEVVMVGVIQACTLTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQV 269

Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
            + M       +  +W  +ISGFAQNG   +ALDLF+EMS  G+ P+   + SA+ AC D
Sbjct: 270 FRMMP----YRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACAD 325

Query: 341 LKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSM 400
           +  L +G  IH   ++       ++G ++++MYSKC  LE+A ++F+ +  +D+  WN+M
Sbjct: 326 VGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAM 384

Query: 401 IAGYCQAGYCGK-AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
           IA  C    CG  A  LF ++ E+ + P+  T+  L+S    +G  +E    F RM
Sbjct: 385 IA-CCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRM 439



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 2/200 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           NG  +EA+ +   ++T G +      ++ L AC D   + L + +H F+    E    + 
Sbjct: 291 NGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRRLEFQCILG 350

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T +L +Y+KCG L+ AR++F  +  R+L  W+AMI          + + LF  + + G+ 
Sbjct: 351 TAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNETGIK 410

Query: 155 PDDFLFPKILQACGNCGDFEAGKL-MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           PD   F  +L A  + G  E GK     ++ + G+    +    V+ +  + G +  A  
Sbjct: 411 PDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANE 470

Query: 214 FFESMDEKDGVA-WNSMISG 232
              SM  +  +  W +++SG
Sbjct: 471 MLASMHTEPTIPIWVALLSG 490


>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
 gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
          Length = 771

 Score =  316 bits (810), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 218/737 (29%), Positives = 355/737 (48%), Gaps = 89/737 (12%)

Query: 97  LLSVYAKCGCLDDAREVF--EDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           LL  YA    +  AR +     +R R+ + W+++  A +      E + ++  MV+ G+ 
Sbjct: 44  LLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRALASAGLPSEALRVYNCMVRSGVR 103

Query: 155 PDDFLFPKILQACGNCGDFEA-----GKLMHSLVIKLGMSCVRR-VRNSVLAVYVKCGKL 208
           PDD  FP  L A       EA     G  +H+  ++ G+        N+++  Y   G+ 
Sbjct: 104 PDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRRGLLLADVFAGNTLVTFYAARGRA 163

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------- 261
             ARR F+ M  +D V+WNS++S     G  ++A R    M R  I + V +        
Sbjct: 164 ADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPAC 223

Query: 262 ----------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
                                       N L+  Y + G  + +M +   M+      + 
Sbjct: 224 GTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQE----KNE 279

Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            +W   +  FA  G     L++F+ MS   V P  VT++S + A  DL    +G E+H  
Sbjct: 280 VSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGY 339

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
           +++     D+ + NSL++MY+K   LE A  +F+ I+ ++V SWN+MIA   Q G   +A
Sbjct: 340 SIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEA 399

Query: 414 YELFIKMQESDVPPNVIT----------------------W-------------NVLISG 438
           + L I+MQ++   PN  T                      W             N LI  
Sbjct: 400 FSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDV 459

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
           Y + G    A D+F R  K+D       S+N+LI GY Q      +L +F++M+S+    
Sbjct: 460 YAKCGQLSVAQDIFDRSEKDD------VSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEY 513

Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
           + V+ +  L ACA L A  + KEIHG ++RR L +   + NSL+D Y K G +  +  IF
Sbjct: 514 DAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIF 573

Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
           + ++ KD+ +WN++I GY +HG    A +LFD MK  G+  +  ++++++ A S  G+VD
Sbjct: 574 NRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVD 633

Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
            GKK F  +     I P   HY+ M+DL GR+G+L E++E I +MP   +S +W ALL +
Sbjct: 634 RGKKYFSQMI-AQNIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPANSDVWGALLGS 692

Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
           CRIHG+I+LA LA E LF+L+P       L+  +Y+  G   +A +++ L +    + + 
Sbjct: 693 CRIHGDIELARLAAEHLFELKPEHSGYYTLLRNMYSESGMWNEANEIKTLMKSRKVQKNP 752

Query: 739 GQCWIEVKNLVYTFVTG 755
              W++  N +  F+ G
Sbjct: 753 AYSWVQSGNKLQAFLVG 769


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 186/627 (29%), Positives = 322/627 (51%), Gaps = 59/627 (9%)

Query: 290 TP--DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
           TP  +V +WT +ISG A+N    +A+D+F+EM      PN VTI+S + A  +L  + + 
Sbjct: 82  TPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIA 141

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
             +H   V+ GF  +V V  +L++MYSK   +  A ++F+ + +++V +WN++++GY   
Sbjct: 142 KSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDH 201

Query: 408 GYCGKAYELFIKMQESDVPPNVITWNVLISG----------------------------- 438
           G+  +A +LF  M+   +  +  T   LI                               
Sbjct: 202 GFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIK 261

Query: 439 ------YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
                 Y+ +   D+A  +F  M   D      A+W  ++ G+      + A+  F KM 
Sbjct: 262 TALMDIYVSHNCVDDAHRVFSEMSVKD-----VAAWTLMLTGFSSGRHWDRAIKHFNKML 316

Query: 493 S-SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
                  + + ++ +L +C++  A  + + +H   ++    +++ V +++ID YA  GN+
Sbjct: 317 GIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNL 376

Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             ++  F GM  KD++ WN++I G  ++G+   A+DLF QMK  GL P+  TF+S++ A 
Sbjct: 377 EDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYAC 436

Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
           S AGMV  G ++F  + +   +IP ++HY+ +ID+ GR+G+L+ A  FI +MP +PD  +
Sbjct: 437 SHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDV 496

Query: 672 WEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
           +  LL ACRIHGNI L     +++F++EP D     L+  +YA+ G  E     R   R 
Sbjct: 497 YSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRS 556

Query: 732 NTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC----- 786
              +   G   IE+   +YTF+ G          Y  ++ + + +  +   +G       
Sbjct: 557 KRMKKDPGFSSIEINQEIYTFMAGEKDHPQ----YFKIEGILKGLILKIKKAGYVPNTNV 612

Query: 787 ----IEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMM 841
               + ++ K++I   HSEK+A+AF L+ +   P T IRI KN+R C  CH  +K+VS +
Sbjct: 613 LLQDVSDDMKKDILYHHSEKMAIAFGLMRTK--PETIIRITKNLRTCDDCHTASKFVSKV 670

Query: 842 HHCEIFLADSKCLHHFKNGQCSCGDYW 868
               + + D+   H F++G CSC DYW
Sbjct: 671 FGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 213/453 (47%), Gaps = 35/453 (7%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           + F+   L++ Y  CG L DA+++F     +N+ +W+ +I   +++  + E +++F  M+
Sbjct: 55  NTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMI 114

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
                P+      +L A  N G     K +H   ++ G      V  +++ +Y K G + 
Sbjct: 115 MGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMG 174

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            AR+ FESM E++ V WN+++SGY   G ++EA  LF+ M R+ + +   T   LI +  
Sbjct: 175 VARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASL 234

Query: 270 QLGQCDVA-------------------------------MEMVKRMESLGITPDVFTWTC 298
            +G   V                                ++   R+ S     DV  WT 
Sbjct: 235 SVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTL 294

Query: 299 MISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           M++GF+      +A+  F +M     +  + + +   +S+C+   AL  G  +H+LA+K 
Sbjct: 295 MLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKT 354

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            F +++ VG+++I+MY+ C  LE A+R F  + +KDV  WN+MIAG    GY   A +LF
Sbjct: 355 CFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLF 414

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
           ++M+ S + P+  T+  ++      G   E + +F  M K   V  N   +  +I    +
Sbjct: 415 LQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGR 474

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            GQ + A      M    F P+     ++L AC
Sbjct: 475 AGQLDAAYSFINNMP---FQPDFDVYSTLLGAC 504



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 129/519 (24%), Positives = 231/519 (44%), Gaps = 63/519 (12%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLL 98
           EAI V   +     K    T  ++L A  +   I +A+ +H F +    E +VFV+T L+
Sbjct: 105 EAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALV 164

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +Y+K GC+  AR++FE M ERN+ TW+A++  YS      E ++LF LM + GL  D +
Sbjct: 165 DMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFY 224

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
               ++ A  + G  + G  +H  +I+ G    + ++ +++ +YV    +  A R F  M
Sbjct: 225 TIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEM 284

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR-EEIKLGVVTFNILIRSYNQLGQCDVA 277
             KD  AW  M++G+      D A + F+KM   + +KL  +    ++ S +  G    A
Sbjct: 285 SVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSG----A 340

Query: 278 MEMVKRMESLGIT-----------------------------------PDVFTWTCMISG 302
           ++  +R+ +L I                                     DV  W  MI+G
Sbjct: 341 LQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAG 400

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
              NG  + A+DLF +M   G+ P+  T  S + AC+    +  G++I    VK      
Sbjct: 401 NGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIP 460

Query: 363 VLVGNS-LINMYSKCEELEAAERVFDMI---KDKDVYSWNSMIAGYCQA-GYCGKAYELF 417
            L   + +I++  +  +L+AA    + +    D DVY   S + G C+  G     +E+ 
Sbjct: 461 NLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVY---STLLGACRIHGNIKLGHEIS 517

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN-------- 469
            K+ E +  PN   + VL+S         E V + +   ++ ++K++    +        
Sbjct: 518 QKIFEME--PNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIY 575

Query: 470 SLIAGYQQLGQKNNALGVFR----KMQSSCFYPNCVTIL 504
           + +AG +   Q     G+ +    K++ + + PN   +L
Sbjct: 576 TFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLL 614



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 118/517 (22%), Positives = 226/517 (43%), Gaps = 83/517 (16%)

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
           D +  + +H+ +I  G++    + NS++  YV CG L  A++ F     K+ V+W  +IS
Sbjct: 36  DLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILIS 95

Query: 232 GYFQIGEND---EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA----------- 277
           G   + +ND   EA  +F +M     K   VT + ++ ++  LG   +A           
Sbjct: 96  G---LAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152

Query: 278 -----------MEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFK 317
                      ++M  +   +G+   +F         TW  ++SG++ +G + +A+DLF 
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFN 212

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
            M   G++ +  TI S I A   +  L +G  IH   ++ G+ +D  +  +L+++Y    
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ---------------- 421
            ++ A RVF  +  KDV +W  M+ G+    +  +A + F KM                 
Sbjct: 273 CVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGIL 332

Query: 422 --------------------ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
                               ++    N+   + +I  Y   GN ++A   F  MG+ D V
Sbjct: 333 SSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVV 392

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL-VASNKVK 520
                 WN++IAG    G   +A+ +F +M+ S   P+  T +SVL AC++  +    ++
Sbjct: 393 -----CWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQ 447

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
             +  V    +  +L     +ID   ++G +  + +  + M    D   +++L+    +H
Sbjct: 448 IFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIH 507

Query: 580 GFWHAALDLFDQMKSFGLKPN-RGTFLSIILAHSLAG 615
           G      ++    K F ++PN  G ++ +   ++LAG
Sbjct: 508 GNIKLGHEI--SQKIFEMEPNDAGYYVLLSNMYALAG 542



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 170/384 (44%), Gaps = 38/384 (9%)

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
            S +    DLK L    +IH+  +  G T +  + NSL+N Y  C  L  A+++F     
Sbjct: 28  ASILRKLKDLKPL---QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPY 84

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ---------- 441
           K+V SW  +I+G  +     +A ++F +M   +  PN +T + ++  +            
Sbjct: 85  KNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSV 144

Query: 442 ---------NGN---EDEAVDLFQRMG--------KNDKVKRNTASWNSLIAGYQQLGQK 481
                     GN   E   VD++ + G             +RN  +WN++++GY   G  
Sbjct: 145 HCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFS 204

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
             A+ +F  M+      +  TI+S++PA   +        IHG ++R   E+   +  +L
Sbjct: 205 EEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTAL 264

Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF-GLKPN 600
           +D Y     +  +  +F  MS KD+  W  ++ G+     W  A+  F++M     LK +
Sbjct: 265 MDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLD 324

Query: 601 RGTFLSIILAHSLAGMVDLGKKVFC-SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEF 659
               + I+ + S +G +  G++V   +I  C+     +   SA+ID+Y   G LE+A  F
Sbjct: 325 SIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVG--SAVIDMYANCGNLEDAKRF 382

Query: 660 IEDMPIEPDSSIWEALLTACRIHG 683
              M  E D   W A++    ++G
Sbjct: 383 FYGMG-EKDVVCWNAMIAGNGMNG 405


>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1359

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 231/799 (28%), Positives = 381/799 (47%), Gaps = 86/799 (10%)

Query: 59   TYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE-- 115
            T+ +LL+AC    ++   + +H + + L    D F+ T L+++Y KCG LD A +VF+  
Sbjct: 563  TFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 622

Query: 116  ---DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD 172
                +  R++   ++MI  Y + +R++E V  F  M+  G+ PD F    ++      G+
Sbjct: 623  SQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGN 682

Query: 173  F--EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA-WNSM 229
            F  E GK +H  +++  +     ++ +++ +Y K G    A R F  +++K  V  WN M
Sbjct: 683  FRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVM 742

Query: 230  ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ-----LGQ---CDVA---- 277
            I G+      + +  L+       +KL   +F   + + +Q      G+   CDV     
Sbjct: 743  IVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGL 802

Query: 278  ----------MEMVKRMESLGITPDVFT---------WTCMISGFAQNGRTSQALDLFKE 318
                      + M  +   +G    VF+         W  M++ + +N     AL+LF  
Sbjct: 803  DNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGF 862

Query: 319  MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
            M    V+P+  T+++ IS C+       G  +H+   K        + ++L+ +YSKC  
Sbjct: 863  MRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGC 922

Query: 379  LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD--VPP--------- 427
               A  VF  +++KD+ +W S+I+G C+ G   +A ++F  M++ D  + P         
Sbjct: 923  DTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVI 982

Query: 428  --------------------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
                                      NV   + LI  Y + G  + A+ +F  M      
Sbjct: 983  NACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMR----- 1037

Query: 462  KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
              N  +WNS+I+ Y +      ++ +F  M S   +P+ V+I SVL A +   +  K K 
Sbjct: 1038 PENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKS 1097

Query: 522  IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
            +HG  LR  + S   + N+LID Y K G   Y+  IF  M  K +ITWN +I GY  HG 
Sbjct: 1098 LHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGD 1157

Query: 582  WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
               AL LFD++K  G  P+  TFLS+I A + +G V+ GK  F  + + Y I P +EHY+
Sbjct: 1158 CRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYA 1217

Query: 642  AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP- 700
             M+DL GR+G+LEEA  FI+ MP E DSSIW  LL+A R H N++L +L+ E+L  +EP 
Sbjct: 1218 NMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPE 1277

Query: 701  -GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSE 759
             G   +Q  ++ +Y   G   +A K+    +E   +   G  WIEV ++   F +GG S 
Sbjct: 1278 RGSTYVQ--LINLYMEAGLKNEAAKLLGEMKERGLQKQPGCSWIEVSDISNVFFSGGSSS 1335

Query: 760  SYSDLLYSWLQNVPENVTA 778
                 ++  L  +  N+  
Sbjct: 1336 PIKAEIFKVLNRLKSNMVT 1354



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/483 (26%), Positives = 233/483 (48%), Gaps = 44/483 (9%)

Query: 50   TQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLD 108
            +   K+   ++   L AC  S +    R++H   + +  + D +V T LLS+Y+KCG + 
Sbjct: 764  SNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVG 823

Query: 109  DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACG 168
            +A  VF  + ++ L  W+AM+ AY  +      +ELF  M Q  + PD F    ++  C 
Sbjct: 824  EAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCS 883

Query: 169  NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
              G ++ GK +H+ + K  +     + +++L +Y KCG    A   F+SM+EKD VAW S
Sbjct: 884  MFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGS 943

Query: 229  MISGYFQIGENDEAHRLFDKMCREE---------------------------------IK 255
            +ISG  + G+  EA ++F  M  ++                                 IK
Sbjct: 944  LISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIK 1003

Query: 256  LGVVTFNILIRS-----YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTS 310
             G V  N+ + S     Y++ G  ++A+++   M       ++  W  MIS +++N    
Sbjct: 1004 TGQV-LNVFVGSSLIDLYSKCGLPEMALKVFTSMR----PENIVAWNSMISCYSRNNLPE 1058

Query: 311  QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI 370
             +++LF  M   G+ P+ V+ITS + A +   +L  G  +H   +++G   D  + N+LI
Sbjct: 1059 LSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALI 1118

Query: 371  NMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
            +MY KC   + AE +F  ++ K + +WN MI GY   G C  A  LF +++++   P+ +
Sbjct: 1119 DMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDV 1178

Query: 431  TWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRK 490
            T+  LIS    +G  +E  + F+ M ++  ++     + +++    + G+   A    + 
Sbjct: 1179 TFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKA 1238

Query: 491  MQS 493
            M +
Sbjct: 1239 MPT 1241



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 168/635 (26%), Positives = 276/635 (43%), Gaps = 95/635 (14%)

Query: 158  FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE- 216
            F FP +L+AC +  +  +GK +H  +I LG      +  S++ +YVKCG L +A + F+ 
Sbjct: 562  FTFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 621

Query: 217  ----SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNIL-------- 264
                 +  +D    NSMI GYF+     E    F +M    ++    + +I+        
Sbjct: 622  WSQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEG 681

Query: 265  ---------IRSY---NQL-GQCDVAMEMVKRMESLGITPD-------------VFTWTC 298
                     I  Y   N L G   +   ++      G++ D             V  W  
Sbjct: 682  NFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNV 741

Query: 299  MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
            MI GF  +     +L+L+       V     + T A+ AC+  +  A G +IH   VKMG
Sbjct: 742  MIVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMG 801

Query: 359  FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              +D  V  SL++MYSKC  +  AE VF  + DK +  WN+M+A Y +      A ELF 
Sbjct: 802  LDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFG 861

Query: 419  KMQESDVPPNVITW-----------------------------------NVLISGYIQNG 443
             M++  V P+  T                                    + L++ Y + G
Sbjct: 862  FMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCG 921

Query: 444  NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ--SSCFYPNCV 501
             + +A  +F+ M + D V     +W SLI+G  + G+   AL VF  M+       P+  
Sbjct: 922  CDTDAYLVFKSMEEKDMV-----AWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 976

Query: 502  TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
             + SV+ ACA L A +   ++HG +++     ++ V +SLID Y+K G    +  +F  M
Sbjct: 977  IMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSM 1036

Query: 562  SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
              ++I+ WNS+I  Y  +     +++LF+ M S G+ P+  +  S+++A S    +  GK
Sbjct: 1037 RPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGK 1096

Query: 622  KVFCSITECYQI---IPMIEHY-SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI-WEALL 676
             +       Y +   IP   H  +A+ID+Y + G  + A    + M  +  S I W  ++
Sbjct: 1097 SL-----HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKM--QHKSLITWNLMI 1149

Query: 677  TACRIHGNIDLAVLAIERLFDL--EPGDVLIQRLI 709
                 HG+   A+   + L      P DV    LI
Sbjct: 1150 YGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLI 1184



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 4/292 (1%)

Query: 32   LCGNGRLNEAITVLDSIATQGAKVRRNTYI--NLLQACIDSNSIHLARKLHAFLNLVTEI 89
            LC NG+  EA+ V   +      ++ ++ I  +++ AC    ++    ++H  +    ++
Sbjct: 948  LCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQV 1007

Query: 90   -DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
             +VFV + L+ +Y+KCG  + A +VF  MR  N+  W++MI  YSR+      +ELF LM
Sbjct: 1008 LNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLM 1067

Query: 149  VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
            +  G+FPD      +L A  +      GK +H   ++LG+     ++N+++ +YVKCG  
Sbjct: 1068 LSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFS 1127

Query: 209  IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             +A   F+ M  K  + WN MI GY   G+   A  LFD++ +       VTF  LI + 
Sbjct: 1128 KYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISAC 1187

Query: 269  NQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
            N  G  +      + M +  GI P +  +  M+    + GR  +A    K M
Sbjct: 1188 NHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAM 1239



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 135/552 (24%), Positives = 232/552 (42%), Gaps = 114/552 (20%)

Query: 300  ISGFAQNGRTSQALDLFKEMSFVGVMPNGV-TITSAISACTDLKALAMGMEIHSLAVKMG 358
            I    Q G   QAL L+ +      +   V T  S + AC+ L  L+ G  IH   + +G
Sbjct: 532  IRALIQKGEYLQALHLYTKHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGSIIVLG 591

Query: 359  FTDDVLVGNSLINMYSKCEELEAAERVFDM-----IKDKDVYSWNSMIAGYCQAGYCGKA 413
            +  D  +  SL+NMY KC  L+ A +VFD      +  +DV   NSMI GY +     + 
Sbjct: 592  WRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFRRFKEG 651

Query: 414  YELFIKMQESDVPPNVITWNVLISGYIQNGN---ED---------------------EAV 449
               F +M    V P+  + ++++S   + GN   ED                       +
Sbjct: 652  VGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGDSFLKTALI 711

Query: 450  DLFQRMGKNDKV---------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
            D++ + G +            K N   WN +I G+       ++L ++   +S+      
Sbjct: 712  DMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKSNSVKLVS 771

Query: 501  VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
             +    L AC+    S   ++IH  V++  L++   V  SL+  Y+K G +  + T+F  
Sbjct: 772  TSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSC 831

Query: 561  MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
            +  K +  WN+++  YV +   ++AL+LF  M+   + P+  T  ++I   S+ G+ D G
Sbjct: 832  VVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYG 891

Query: 621  KKVFCSI-TECYQIIPMIEHYSAMIDLYG------------------------------- 648
            K V   +     Q  P IE  SA++ LY                                
Sbjct: 892  KSVHAELFKRPIQSTPAIE--SALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLC 949

Query: 649  RSGKLEEAMEFIEDM-----PIEPDSSIWEALLTAC----------RIHGNIDLAVLAIE 693
            ++GK +EA++   DM      ++PDS I  +++ AC          ++HG++        
Sbjct: 950  KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSM-------- 1001

Query: 694  RLFDLEPGDVL---IQRLILQIYAICGKPEDALKV-RKLERENT----------RRNSFG 739
                ++ G VL   +   ++ +Y+ CG PE ALKV   +  EN            RN+  
Sbjct: 1002 ----IKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLP 1057

Query: 740  QCWIEVKNLVYT 751
            +  IE+ NL+ +
Sbjct: 1058 ELSIELFNLMLS 1069


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 198/579 (34%), Positives = 295/579 (50%), Gaps = 54/579 (9%)

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK-- 392
           +  C D KAL  G  +HS  VK G+  D L+ N LI MY KC  +  A  VFD I++K  
Sbjct: 31  LKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQIQEKNA 90

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE----- 447
           DV SWN +I  Y Q G   +A  LF  M    V  N +T    I       +E+E     
Sbjct: 91  DVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVH 150

Query: 448 --AVD------------LFQRMGKNDKV-----------KRNTASWNSLIAGYQQLGQKN 482
             AVD            L    GK   V           ++N  +WN+++A Y Q  Q  
Sbjct: 151 AIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCK 210

Query: 483 NALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLI 542
            A+ VFR M      P+ VT L+++ ACA L A  + + +H  +    +   + +  +++
Sbjct: 211 KAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVM 270

Query: 543 DTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
             Y K G +  +R IFD +  K+ +TW++++  Y  +G+   A++L+ +M   GL+ N  
Sbjct: 271 HFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGI 330

Query: 603 TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIED 662
           TFL ++ A S AG    G   F S+   + ++P+ EHY  +IDL GRSG+L+ + + I  
Sbjct: 331 TFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINS 390

Query: 663 MPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDA 722
           MP EPDSS W ALL ACR+HG++D      E +++L+P D     L+  +Y+  G+ ++A
Sbjct: 391 MPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTGRMDEA 450

Query: 723 LKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP---ENVTAR 779
            + RK  R        G   IEVK+ V+ F+        +  L+  L  +    E + AR
Sbjct: 451 RRTRKAMRLRGITKQPGLSSIEVKDRVHEFMA-------AQKLHPQLGRIHAEIERLKAR 503

Query: 780 SSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCV 829
              +G           +EEEEKE++   HSE+LA+AF LI  S  P T + IVKN+R+C 
Sbjct: 504 VKEAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLI--STPPGTALHIVKNLRVCF 561

Query: 830 HCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            CH   K +S +   +I + D+   HHF+NG CSCGDYW
Sbjct: 562 DCHAAVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 166/358 (46%), Gaps = 48/358 (13%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N+LI  Y + G    A  +  +++      DV +W  +I  + QNG   +AL LFK M  
Sbjct: 63  NLLIEMYGKCGGIAEARSVFDQIQEK--NADVISWNGIIGAYTQNGLGKEALHLFKTMDL 120

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
            GV+ N VT+ +AI AC  L +   G  +H++AV      D +VG SL+NM+ KC+ ++A
Sbjct: 121 EGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDA 180

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG--- 438
           A  VFD +  K++ +WN+M+A Y Q   C KA ++F  M    V P+ +T+  +I     
Sbjct: 181 ARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAA 240

Query: 439 --------------------------------YIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                           Y + G  D A  +F  +G     K+NT 
Sbjct: 241 LAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLG-----KKNTV 295

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           +W++++A Y Q G +  A+ ++ +M       N +T L +L AC++   S    +    +
Sbjct: 296 TWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSM 355

Query: 527 LRRSLESSLPVMN---SLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
           +R      +PV     +LID   +SG +  S  + + M    D   W +L+    +HG
Sbjct: 356 IRDF--GVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPYEPDSSAWLALLGACRMHG 411



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 171/356 (48%), Gaps = 12/356 (3%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NG   EA+ +  ++  +G    + T IN + AC    S    R +HA  ++   E D  V
Sbjct: 105 NGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAIAVDKRLESDTMV 164

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L++++ KC  +D AR VF+ +  +NL TW+ M+  YS++ + ++ +++F  M  +G+
Sbjct: 165 GTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKAIQVFRFMDLEGV 224

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD   F  I+ AC        G+++H  +   G+     +  +V+  Y KCG+L  AR 
Sbjct: 225 QPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHFYGKCGRLDNARA 284

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F+S+ +K+ V W+++++ Y Q G   EA  L+ +M +  +++  +TF  L+ + +  G+
Sbjct: 285 IFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITFLGLLFACSHAGR 344

Query: 274 C-DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
             D     V  +   G+ P    +  +I    ++G+   + DL   M +    P+     
Sbjct: 345 SMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMPY---EPDSSAWL 401

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDD---VLVGNSLINMYSKCEELEAAERV 385
           + + AC     +  G  I  L  ++   D    +L    L N+YS    ++ A R 
Sbjct: 402 ALLGACRMHGDVDRGARIAELIYELDPEDSGPYIL----LSNLYSSTGRMDEARRT 453



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 205/435 (47%), Gaps = 53/435 (12%)

Query: 58  NTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           +TY+ LL+ C DS ++   +++H+  +      D  +   L+ +Y KCG + +AR VF+ 
Sbjct: 25  STYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQ 84

Query: 117 MRERN--LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE 174
           ++E+N  + +W+ +IGAY+++   +E + LF  M  +G+  +       + AC +    E
Sbjct: 85  IQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEE 144

Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
            G+++H++ +   +     V  S++ ++ KC  +  AR  F+S+  K+ V WN+M++ Y 
Sbjct: 145 EGRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYS 204

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRS--------------------------- 267
           Q  +  +A ++F  M  E ++   VTF  +I +                           
Sbjct: 205 QNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVA 264

Query: 268 --------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
                   Y + G+ D A  +    +SLG   +  TW+ +++ +AQNG  ++A++L+ EM
Sbjct: 265 LGTAVMHFYGKCGRLDNARAI---FDSLG-KKNTVTWSAILAAYAQNGYETEAIELYHEM 320

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIH-SLAVKMGFTDDVLVGNSLINMYSKCEE 378
              G+  NG+T    + AC+       G++   S+    G         +LI++  +  +
Sbjct: 321 VQGGLEVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQ 380

Query: 379 LEAAERVFD-MIKDKDVYSWNSMIAGYCQ----AGYCGKAYELFIKMQESDVPPNVITWN 433
           L+ +E + + M  + D  +W +++ G C+         +  EL  ++   D  P ++  N
Sbjct: 381 LQLSEDLINSMPYEPDSSAWLALL-GACRMHGDVDRGARIAELIYELDPEDSGPYILLSN 439

Query: 434 VLISGYIQNGNEDEA 448
           +    Y   G  DEA
Sbjct: 440 L----YSSTGRMDEA 450



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 118/500 (23%), Positives = 198/500 (39%), Gaps = 91/500 (18%)

Query: 125 WSAMIGAYSRDQRWREVVELFFLM-------------------VQDGLFPDDFLFPKILQ 165
           WSA  G  + D+R  E+     L+                   V+DG   D  +   +++
Sbjct: 8   WSAANGNRTVDERREEISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIE 67

Query: 166 ACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK--DG 223
                                               Y KCG +  AR  F+ + EK  D 
Sbjct: 68  M-----------------------------------YGKCGGIAEARSVFDQIQEKNADV 92

Query: 224 VAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL-----GQCDVAM 278
           ++WN +I  Y Q G   EA  LF  M  E +    VT    I +   L     G+   A+
Sbjct: 93  ISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEEGRIVHAI 152

Query: 279 EMVKRMES---LGIT-----------------------PDVFTWTCMISGFAQNGRTSQA 312
            + KR+ES   +G +                        ++ TW  M++ ++QN +  +A
Sbjct: 153 AVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQNWQCKKA 212

Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
           + +F+ M   GV P+ VT  + I AC  L A   G  +H      G   DV +G ++++ 
Sbjct: 213 IQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVALGTAVMHF 272

Query: 373 YSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW 432
           Y KC  L+ A  +FD +  K+  +W++++A Y Q GY  +A EL+ +M +  +  N IT+
Sbjct: 273 YGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGLEVNGITF 332

Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
             L+      G   + VD F  M ++  V      + +LI    + GQ   +  +   M 
Sbjct: 333 LGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSEDLINSMP 392

Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
              + P+    L++L AC      ++   I   +     E S P +  L + Y+ +G + 
Sbjct: 393 ---YEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYI-LLSNLYSSTGRMD 448

Query: 553 YSRTIFDGMSSKDIITWNSL 572
            +R     M  + I     L
Sbjct: 449 EARRTRKAMRLRGITKQPGL 468


>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 184/582 (31%), Positives = 301/582 (51%), Gaps = 55/582 (9%)

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           TS + +C   ++L  G ++H   +  G   D ++   L+++Y+ C  +  A R+FD +  
Sbjct: 66  TSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPK 125

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV----------------- 434
           ++V+ WN +I  Y + G    A +L+  M +  V P+  T+ +                 
Sbjct: 126 RNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREV 185

Query: 435 ------------------LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
                             L+  Y + G  D+A  +F R+   D V      WNS+IA Y 
Sbjct: 186 HERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSV-----VWNSMIAAYG 240

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
           Q G+   AL + R M ++   P   T++S + A A   A  + +E+HG   RR  +    
Sbjct: 241 QNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDK 300

Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK-SF 595
           +  SL+D YAKSG +  +R +F+ +  +++++WN++ICGY +HG +  AL LF++M+   
Sbjct: 301 LKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEA 360

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
            + P+  TF+ ++ A +  GMV   K+ F  + + Y I P ++H++ ++D+ G +G+ EE
Sbjct: 361 QVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEE 420

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A + I+ MP++PDS IW ALL  C+IH N++L  LA+++L +LEP D     L+  IYA 
Sbjct: 421 AYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQ 480

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN 775
            GK E A +VRKL      +   G  WIE+K   + F+ G  S   S  +Y  L    E 
Sbjct: 481 SGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEEL----ER 536

Query: 776 VTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIR 826
           +    S +G           + ++EK  +   HSE+LA+AF LI S+ +   + + KN+R
Sbjct: 537 LEGLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLI-STPSGTKLLVTKNLR 595

Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +C  CH   K +S +   EI + D    HHF NG+CSC DYW
Sbjct: 596 VCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 199/455 (43%), Gaps = 52/455 (11%)

Query: 60  YINLLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           Y ++LQ+C+ S S+   R+LH  L LV+ +  D  + TKL+ +YA CG +  AR +F+ M
Sbjct: 65  YTSVLQSCVASRSLGTGRQLHGRL-LVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGM 123

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
            +RN++ W+ +I AY+RD      ++L+  MV  G+ PD+F +P  L+AC    D E G+
Sbjct: 124 PKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGR 183

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
            +H  V+         V   ++ +Y KCG +  AR  F+ +  +D V WNSMI+ Y Q G
Sbjct: 184 EVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNG 243

Query: 238 ENDEAHRLFDKMCREEIKLGVVTF-----------------------------------N 262
              EA  L   M    +   + T                                     
Sbjct: 244 RPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKT 303

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF- 321
            L+  Y + G   VA  + +++    +  ++ +W  MI G+  +G   +AL LF +M   
Sbjct: 304 SLVDMYAKSGWVQVARVLFEQL----MKRELVSWNAMICGYGMHGHFDEALKLFNKMRVE 359

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM-GFTDDVLVGNSLINMYSKCEELE 380
             V P+ +T    +SAC     +    E   L V +      V     L+++       E
Sbjct: 360 AQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFE 419

Query: 381 AAERVFDMIK----DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
            A   +D+IK      D   W +++ G C+     +  EL ++      P +   + +L 
Sbjct: 420 EA---YDLIKGMPMQPDSGIWGALLNG-CKIHKNVELGELALQKLIELEPEDAGNYVLLS 475

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
           + Y Q+G  ++A  + + M      K    SW  L
Sbjct: 476 NIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIEL 510



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 162/368 (44%), Gaps = 40/368 (10%)

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           +  +LQ+C        G+ +H  ++  G+     +   ++ +Y  CG +  ARR F+ M 
Sbjct: 65  YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMP 124

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI---------------- 263
           +++   WN +I  Y + G ++ A +L+  M    ++    T+ +                
Sbjct: 125 KRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGRE 184

Query: 264 -------------------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFA 304
                              L+  Y + G  D A  +  R+       D   W  MI+ + 
Sbjct: 185 VHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIR----VRDSVVWNSMIAAYG 240

Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
           QNGR  +AL L ++M+  GV P   T+ S ISA  D  AL  G E+H    + GF     
Sbjct: 241 QNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDK 300

Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ-ES 423
           +  SL++MY+K   ++ A  +F+ +  +++ SWN+MI GY   G+  +A +LF KM+ E+
Sbjct: 301 LKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEA 360

Query: 424 DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN 483
            V P+ IT+  ++S     G   EA + F  M     +K     +  L+      G+   
Sbjct: 361 QVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEE 420

Query: 484 ALGVFRKM 491
           A  + + M
Sbjct: 421 AYDLIKGM 428



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 142/321 (44%), Gaps = 33/321 (10%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           +VF W  +I  +A++G    A+ L++ M   GV P+  T   A+ AC  L  L  G E+H
Sbjct: 127 NVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVH 186

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
              +   + +D+ V   L++MY+KC  ++ A  VFD I+ +D   WNSMIA Y Q G   
Sbjct: 187 ERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPM 246

Query: 412 KAYELFIKMQESDVPPNVITWNVLIS-----GYIQNGNEDEAVDLFQRMGKNDKV----- 461
           +A  L   M  + V P + T    IS       +  G E       +   + DK+     
Sbjct: 247 EALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLV 306

Query: 462 --------------------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQ-SSCFYPNC 500
                               KR   SWN++I GY   G  + AL +F KM+  +   P+ 
Sbjct: 307 DMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDN 366

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLR-RSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
           +T + VL AC +     + KE  G ++   S++ ++     L+D    +G    +  +  
Sbjct: 367 ITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDLIK 426

Query: 560 GMS-SKDIITWNSLICGYVLH 579
           GM    D   W +L+ G  +H
Sbjct: 427 GMPMQPDSGIWGALLNGCKIH 447



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 93/398 (23%), Positives = 168/398 (42%), Gaps = 35/398 (8%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
           NGR  EA+++   +A  G      T ++ + A  D+ ++   R+LH F      +    +
Sbjct: 242 NGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKL 301

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM-VQDG 152
           KT L+ +YAK G +  AR +FE + +R L +W+AMI  Y     + E ++LF  M V+  
Sbjct: 302 KTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQ 361

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + PD+  F  +L AC + G  +  K    L++      V  ++ +V         L  A 
Sbjct: 362 VTPDNITFVGVLSACNHGGMVKEAKEFFGLMVD-----VYSIKPTVQHFTCLVDVLGHAG 416

Query: 213 RFFESMD-------EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           RF E+ D       + D   W ++++G  +I +N E   L  +   E        + +L 
Sbjct: 417 RFEEAYDLIKGMPMQPDSGIWGALLNG-CKIHKNVELGELALQKLIELEPEDAGNYVLLS 475

Query: 266 RSYNQLGQCDVAMEMVKRMESLGITPDVF-TWTCM-------ISGFAQNGRTSQALDLFK 317
             Y Q G+ + A  + K M + G+   +  +W  +       + G A + R+++  +  +
Sbjct: 476 NIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELE 535

Query: 318 E----MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
                MS  G MP+ + +   +    D K   M      LA+  G          L+   
Sbjct: 536 RLEGLMSDAGYMPDTMPVFHDVG--DDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKN 593

Query: 374 SK-CEELEAAERVFDMIKD-----KDVYSWNSMIAGYC 405
            + CE+     ++   I       +DV  ++  + G C
Sbjct: 594 LRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGEC 631


>gi|357121594|ref|XP_003562503.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Brachypodium distachyon]
          Length = 544

 Score =  315 bits (808), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 185/525 (35%), Positives = 282/525 (53%), Gaps = 19/525 (3%)

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H++  K+GF       N+ I  Y     +  A RVFD +  +D  S+NSMI GY  +G 
Sbjct: 33  LHAVCTKLGFLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGD 92

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
            G A  LF    E  + P  +TW  +++G+ + G+ + A  +F+ M + D V     SWN
Sbjct: 93  VGSAQRLF----ERVLAPTPVTWTSMVAGFCRAGDVESARRVFEEMPERDLV-----SWN 143

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           ++I+G         AL +FR M    F PN  T++SVL AC    A    K +H  V ++
Sbjct: 144 AMISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEKK 203

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            L     +  +L+D YAK G +  +  +F G+ +++  TWN++I G  ++G+   ALD+F
Sbjct: 204 RLRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMF 263

Query: 590 DQMKSFG-LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
            QM+  G + P+  TF+ ++LA S AG VD GK+ F +I + Y +  ++EHY+ M+DL  
Sbjct: 264 RQMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVELILEHYACMVDLLA 323

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
           RSG L+EA + I +MP++PD  +W ALL  CR+H N+ +A   I  +     GD +   L
Sbjct: 324 RSGHLQEAHKLITEMPMKPDVVVWRALLGGCRLHKNVKMAENVISEMEATCSGDHV---L 380

Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
           +  +YA  G+      VR+  R        G   +E+   ++ F++G  S    D +++ 
Sbjct: 381 LSNLYAAVGRWNGVEDVRRTMRSKGIEKIPGCSSVEMDGSIHEFISGDKSHPSYDDIHAK 440

Query: 769 LQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
           L  +            ++     IE+EEKE+  G HSEKLA+AF LIG      TIRIVK
Sbjct: 441 LIEIGGRMQQHGYVTETAEVFYDIEDEEKEQALGYHSEKLAIAFGLIGGPPEA-TIRIVK 499

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+R C  CH  AK VS ++H EI + D    HHF+ G CSC D+W
Sbjct: 500 NLRFCTDCHSFAKLVSKIYHREIVVRDRARFHHFRGGACSCNDFW 544



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 165/350 (47%), Gaps = 41/350 (11%)

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H++  KLG     R  N+ +  Y   G++  ARR F+ M  +D V++NSMI GY   G+
Sbjct: 33  LHAVCTKLGFLLCTRTNNAFIQGYCSAGRVTDARRVFDGMPRRDTVSFNSMIHGYAVSGD 92

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
              A RLF+++    +    VT+  ++  + + G  + A  + + M       D+ +W  
Sbjct: 93  VGSAQRLFERV----LAPTPVTWTSMVAGFCRAGDVESARRVFEEMPER----DLVSWNA 144

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           MISG   N    +AL LF+ M   G +PN  T+ S +SACT   AL  G  +H    K  
Sbjct: 145 MISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKR 204

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              D  +G +L++MY+KC  +E A  VF  ++ ++  +WN+MI G    GY  KA ++F 
Sbjct: 205 LRWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFR 264

Query: 419 KMQ-ESDVPPNVITW-NVLI----SGYIQNGNEDE------------------AVDLFQR 454
           +M+    V P+ +T+  VL+    +G++  G E                     VDL  R
Sbjct: 265 QMELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVELILEHYACMVDLLAR 324

Query: 455 MGKNDK---------VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
            G   +         +K +   W +L+ G +       A  V  +M+++C
Sbjct: 325 SGHLQEAHKLITEMPMKPDVVVWRALLGGCRLHKNVKMAENVISEMEATC 374



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 173/388 (44%), Gaps = 24/388 (6%)

Query: 11  QLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNT--YINLLQACI 68
           +L  LL  ++N  F    +   C  GR+ +A  V D +       RR+T  + +++    
Sbjct: 39  KLGFLLCTRTNNAF----IQGYCSAGRVTDARRVFDGMP------RRDTVSFNSMIHGYA 88

Query: 69  DSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAM 128
            S  +  A++L  F  ++    V   T +++ + + G ++ AR VFE+M ER+L +W+AM
Sbjct: 89  VSGDVGSAQRL--FERVLAPTPV-TWTSMVAGFCRAGDVESARRVFEEMPERDLVSWNAM 145

Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM 188
           I     ++   E + LF  M+++G  P+      +L AC   G  E GK +H  V K  +
Sbjct: 146 ISGCVGNRLPVEALCLFRWMMEEGFVPNRGTVVSVLSACTGAGALETGKWVHVFVEKKRL 205

Query: 189 SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
                +  +++ +Y KCG +  A   F  +  ++   WN+MI+G    G + +A  +F +
Sbjct: 206 RWDEFLGTALVDMYAKCGAVELALEVFTGLRARNTCTWNAMINGLAMNGYSAKALDMFRQ 265

Query: 249 M-CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQN 306
           M     +    VTF  ++ + +  G  D   E    + +  G+   +  + CM+   A++
Sbjct: 266 MELNGTVAPDEVTFVGVLLACSHAGFVDAGKEHFYTIPQKYGVELILEHYACMVDLLARS 325

Query: 307 GRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVG 366
           G   +A  L  EM    + P+ V   + +  C   K + M   + S        D VL  
Sbjct: 326 GHLQEAHKLITEMP---MKPDVVVWRALLGGCRLHKNVKMAENVISEMEATCSGDHVL-- 380

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDV 394
             L N+Y+        E V   ++ K +
Sbjct: 381 --LSNLYAAVGRWNGVEDVRRTMRSKGI 406


>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
          Length = 677

 Score =  315 bits (808), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 186/610 (30%), Positives = 316/610 (51%), Gaps = 45/610 (7%)

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  ++S  ++ G    AL +F+ +      PN  T T  ++AC  L  L     +   A 
Sbjct: 76  WNGLLSAHSRAGAPGAALRVFRALP-SSARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
             G+  DV V ++L+++YS+C  +E A RVFD +  KD  +W++M+AG+  AG   +A  
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194

Query: 416 LFIKMQESDVPPN-----------------------------------VITWNVLISGYI 440
           ++ +M+E  V  +                                   V+T   L+S Y 
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
           +NG+ D A  +F+ M       RN  +W++LI+G+ Q G+   AL +FR++Q+    P  
Sbjct: 255 KNGHLDVACQVFRMMPY-----RNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCS 309

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
             ++S L ACA +      K IHG +LRR LE    +  +++D Y+K G++  +R +F+ 
Sbjct: 310 WALVSALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNK 368

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
           +SS+D++ WN++I     HG  H AL LF ++   G+KP+  TF S++ A S +G+V+ G
Sbjct: 369 LSSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEG 428

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
           K  F  + + + I P  +HY  ++DL  RSG +EEA + +  M  EP  +IW  LL+ C 
Sbjct: 429 KFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCL 488

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
            +  ++L     +++ +L P D+ +  L+  +YA   K +   ++RKL +++  +   G 
Sbjct: 489 NNKKLELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGY 548

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS--SHSGLCIEEEEKEEISGI 798
             IEVK   + FV    S      +   +  +   +        +     + +++++   
Sbjct: 549 SLIEVKGTRHAFVMEDQSHPQHREILKMVAKLNSEMRKLGYVPRTEFVYHDLDEDQLLSY 608

Query: 799 HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFK 858
           HSE+LA+AF L+ +S     + I+KN+R+C  CH+  KY+S +   EI + D+K  HHFK
Sbjct: 609 HSERLAIAFGLLNTSPGTRLV-IIKNLRVCGDCHDAIKYISKIVDREIVVRDAKRFHHFK 667

Query: 859 NGQCSCGDYW 868
           +G CSCGDYW
Sbjct: 668 DGACSCGDYW 677



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 203/444 (45%), Gaps = 50/444 (11%)

Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
           W+ ++ A+SR       + +F  +      P+   F   L AC   GD +A + +     
Sbjct: 76  WNGLLSAHSRAGAPGAALRVFRALPSSAR-PNSTTFTLTLTACARLGDLDAAESVRVRAF 134

Query: 185 KLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHR 244
             G      V +++L +Y +CG +  A R F+ M  KD VAW++M++G+   G   EA  
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194

Query: 245 LFDKM-----------------------------------CREEIKLGVVTFNILIRSYN 269
           ++ +M                                    R  +++ VVT   L+  Y 
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254

Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
           + G  DVA ++ + M       DV TW+ +ISGFAQNGR  +ALDLF+E+   G+ P   
Sbjct: 255 KNGHLDVACQVFRMMP---YRNDV-TWSALISGFAQNGRAVEALDLFRELQADGLQPCSW 310

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
            + SA+ AC  +  L +G  IH   ++       ++G ++++MYSKC  LE+A ++F+ +
Sbjct: 311 ALVSALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKL 369

Query: 390 KDKDVYSWNSMIAGYCQAGYCGK-AYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
             +D+  WN++IA  C    CG  A  LF ++ E+ + P+  T+  L+S    +G  +E 
Sbjct: 370 SSRDLVLWNAIIA-CCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEG 428

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
              F RM K   ++     +  ++    + G    A  +   MQ+    P     + +L 
Sbjct: 429 KFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTE---PTIAIWVILLS 485

Query: 509 ACAYLVASNKVKEIHGCVLRRSLE 532
            C     +NK  E+   + ++ LE
Sbjct: 486 GC----LNNKKLELGETIAKKILE 505



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 175/372 (47%), Gaps = 13/372 (3%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
           GR  EA+ +   +   G        + ++QAC+ + +  +   +H   L     +DV   
Sbjct: 187 GRPVEALAMYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTT 246

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T L+S+YAK G LD A +VF  M  RN  TWSA+I  ++++ R  E ++LF  +  DGL 
Sbjct: 247 TSLVSMYAKNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQ 306

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVI-KLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           P  +     L AC + G  + GK +H  ++ +L   C+  +  +VL +Y KCG L  AR+
Sbjct: 307 PCSWALVSALLACASVGFLKLGKSIHGFILRRLEWQCI--LGTAVLDMYSKCGSLESARK 364

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            F  +  +D V WN++I+     G   +A  LF ++    IK    TF  L+ + +  G 
Sbjct: 365 LFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGL 424

Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
            +       RM +  GI P    + C++   A++G   +A D+   M      P      
Sbjct: 425 VEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQ---TEPTIAIWV 481

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
             +S C + K L +G  I    +++   +D+ V   + N+Y+  ++ +    +  ++KD 
Sbjct: 482 ILLSGCLNNKKLELGETIAKKILELR-PEDIGVLALVSNLYAAAKKWDKVREIRKLMKD- 539

Query: 393 DVYSWNSMIAGY 404
              S +  + GY
Sbjct: 540 ---SGSKKVPGY 548



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 172/388 (44%), Gaps = 73/388 (18%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           DVFV + LL +Y++CG +++A  VF+ M  ++   WS M+  +    R  E + ++  M 
Sbjct: 141 DVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALAMYSRMR 200

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           + G+  D+ +   ++QAC + G+   G  +H  +++  M        S++++Y K G L 
Sbjct: 201 EHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYAKNGHLD 260

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE---------------- 253
            A + F  M  ++ V W+++ISG+ Q G   EA  LF ++  +                 
Sbjct: 261 VACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVSALLACA 320

Query: 254 ----IKLGVVTFNILIRS--------------YNQLGQCDVAMEMVKRMESLGITPDVFT 295
               +KLG      ++R               Y++ G  + A ++  ++ S     D+  
Sbjct: 321 SVGFLKLGKSIHGFILRRLEWQCILGTAVLDMYSKCGSLESARKLFNKLSS----RDLVL 376

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
           W  +I+    +G    AL LF+E++  G+ P+  T  S +SA +           HS  V
Sbjct: 377 WNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALS-----------HSGLV 425

Query: 356 KMG-FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           + G F  D ++         K   +E AE+ +  I D        ++A   ++G   +A 
Sbjct: 426 EEGKFWFDRMI---------KEFGIEPAEKHYVCIVD--------LLA---RSGLVEEAN 465

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQN 442
           ++   MQ     P +  W +L+SG + N
Sbjct: 466 DMLASMQ---TEPTIAIWVILLSGCLNN 490



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 2/200 (1%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
           NGR  EA+ +   +   G +      ++ L AC     + L + +H F+    E    + 
Sbjct: 287 NGRAVEALDLFRELQADGLQPCSWALVSALLACASVGFLKLGKSIHGFILRRLEWQCILG 346

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           T +L +Y+KCG L+ AR++F  +  R+L  W+A+I          + + LF  + + G+ 
Sbjct: 347 TAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAIIACCGTHGCGHDALALFQELNETGIK 406

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIK-LGMSCVRRVRNSVLAVYVKCGKLIWARR 213
           PD   F  +L A  + G  E GK     +IK  G+    +    ++ +  + G +  A  
Sbjct: 407 PDHATFASLLSALSHSGLVEEGKFWFDRMIKEFGIEPAEKHYVCIVDLLARSGLVEEAND 466

Query: 214 FFESMDEKDGVA-WNSMISG 232
              SM  +  +A W  ++SG
Sbjct: 467 MLASMQTEPTIAIWVILLSG 486


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 206/712 (28%), Positives = 347/712 (48%), Gaps = 81/712 (11%)

Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
           N +++ Y + G +  A R+FD      +     T+N L+ +   L    +  +M     S
Sbjct: 45  NHLLTAYGKAGRHARARRVFDATPHPNL----FTYNALLST---LAHARLLDDMDSLFAS 97

Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG--VMPNGVTITSAISACTDLKAL 344
           +    D  ++  +I+GF+  G  ++A+ L+  +   G  V P+ +T+++ + A + L   
Sbjct: 98  MA-QRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDR 156

Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSK----------------------------- 375
           A+G + H   +++GF  +  VG+ L+ MY+K                             
Sbjct: 157 ALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGL 216

Query: 376 --CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
             C+ +E A R+F+++ D+D  +W +M+ G+ Q G   +A   F +M+   +  +  T+ 
Sbjct: 217 LRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFG 276

Query: 434 VL---------------ISGYIQNGNEDEAV----DLFQRMGKNDKVK-----------R 463
            +               I  YI   + D+ V     L     K   +K           +
Sbjct: 277 SILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCK 336

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           N  SW +LI GY Q G    A+ VF +MQ     P+  T+ SV+ +CA L +  +  + H
Sbjct: 337 NIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFH 396

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
              L   L   + V N+L+  Y K G+I  +  +FD M   D ++W +L+ GY   G   
Sbjct: 397 CLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAK 456

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
             +DLF++M +  +KP+  TF+ ++ A S AG V+ G   F S+ + + I+P+ +HY+ M
Sbjct: 457 ETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCM 516

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           IDLY RSG+L+EA EFI+ MP+ PD+  W  LL+ACR+ G++++   A E L +++P + 
Sbjct: 517 IDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEIDPQNP 576

Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
               L+  ++A  G      ++R+  R+   +   G  WI+ KN V+ F     S  +S 
Sbjct: 577 ASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSK 636

Query: 764 LLY---SWLQN--VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH- 817
            +Y    WL +  + E      S     + + +K  +   HSEKLA+AF L+     PH 
Sbjct: 637 GIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFGLM---FVPHE 693

Query: 818 -TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
             IRIVKN+R+CV CH   K +S +   +I + D+   H F NG CSCGD+W
Sbjct: 694 MPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 145/600 (24%), Positives = 244/600 (40%), Gaps = 127/600 (21%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           + Y  LL A   +   H A  LH  +   L       +   LL+ Y K G    AR VF+
Sbjct: 7   SQYAALLSAAARTEP-HAAGALHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVFD 65

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ------------------------- 150
                NL+T++A++   +  +   ++  LF  M Q                         
Sbjct: 66  ATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRL 125

Query: 151 --------DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
                     + P       ++ A    GD   G+  H  +++LG      V + ++ +Y
Sbjct: 126 YHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMY 185

Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFN 262
            K G +  A+R F+ MD K+ V +N+MI+G  +    +EA RLF+ M   +     +T+ 
Sbjct: 186 AKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRD----CITWT 241

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            ++  + Q G    A+   +RM   GI  D +T+                          
Sbjct: 242 TMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTF-------------------------- 275

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
                     S ++AC  L AL  G +IH+  ++  + D+V VG++L++MYSKC  ++ A
Sbjct: 276 ---------GSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPA 326

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---------- 432
           E  F  +  K++ SW ++I GY Q G   +A  +F +MQ   + P+  T           
Sbjct: 327 ETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANL 386

Query: 433 -------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTAS 467
                                    N L++ Y + G+ ++A  LF  M  +D+V     S
Sbjct: 387 ASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQV-----S 441

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
           W +L+ GY Q G+    + +F KM +    P+ VT + VL AC+      K     GC  
Sbjct: 442 WTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEK-----GCSY 496

Query: 528 RRSLESS---LPVMNS---LIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
             S++     +P+ +    +ID Y++SG +  +      M    D I W +L+    L G
Sbjct: 497 FHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 162/307 (52%), Gaps = 7/307 (2%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VF 92
           NG  ++A+     +  QG  + + T+ ++L AC   +++   +++HA++ + T  D  VF
Sbjct: 250 NGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYI-IRTHYDDNVF 308

Query: 93  VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
           V + L+ +Y+KC  +  A   F  M  +N+ +W+A+I  Y ++    E V +F  M +DG
Sbjct: 309 VGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDG 368

Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
           + PDDF    ++ +C N    E G   H L +  G+     V N+++ +Y KCG +  A 
Sbjct: 369 IDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAH 428

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
           R F+ M   D V+W ++++GY Q G   E   LF+KM  +++K   VTF  ++ + ++ G
Sbjct: 429 RLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAG 488

Query: 273 QCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
             +        M+   GI P    +TCMI  ++++GR  +A +  K+M    + P+ +  
Sbjct: 489 FVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMP---MHPDAIGW 545

Query: 332 TSAISAC 338
            + +SAC
Sbjct: 546 GTLLSAC 552



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 122/503 (24%), Positives = 208/503 (41%), Gaps = 70/503 (13%)

Query: 34  GNGRLNEAITVLDSIATQGAKVR--RNTYINLLQACIDSNSIHLARKLH-AFLNLVTEID 90
           G G    A+ +  ++   G+ VR  R T   ++ A        L R+ H   L L   ++
Sbjct: 115 GGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVN 174

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDM-------------------------------RE 119
            FV + L+ +YAK G + DA+ VF++M                                +
Sbjct: 175 AFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTD 234

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           R+  TW+ M+  ++++    + +  F  M   G+  D + F  IL ACG     E GK +
Sbjct: 235 RDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQI 294

Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
           H+ +I+        V ++++ +Y KC  +  A   F  M  K+ ++W ++I GY Q G +
Sbjct: 295 HAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCS 354

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRSYNQL---------------------------- 271
           +EA R+F +M R+ I     T   +I S   L                            
Sbjct: 355 EEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNAL 414

Query: 272 ----GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
               G+C  ++E   R+    +  D  +WT +++G+AQ GR  + +DLF++M    V P+
Sbjct: 415 VTLYGKCG-SIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPD 473

Query: 328 GVTITSAISACTDLKALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERV 385
           GVT    +SAC+    +  G    HS+    G          +I++YS+   L EA E +
Sbjct: 474 GVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFI 533

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
             M    D   W ++++     G           + E D P N  ++ +L S +   GN 
Sbjct: 534 KQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEID-PQNPASYVLLCSMHATKGNW 592

Query: 446 DEAVDLFQRMGKNDKVKRNTASW 468
           ++   L + M      K    SW
Sbjct: 593 NQVAQLRRGMRDRQVKKEPGCSW 615


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  315 bits (807), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 200/660 (30%), Positives = 320/660 (48%), Gaps = 91/660 (13%)

Query: 295  TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
            TWT +ISGFA+ G +    +LF+EM   G  PN  T++S +  C+    L +G  +H+  
Sbjct: 357  TWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWM 416

Query: 355  VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYC--------- 405
            ++ G   DV++GNS++++Y KC+  E AER+F+++ + DV SWN MI  Y          
Sbjct: 417  LRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSL 476

Query: 406  ----------------------QAGYCGKAYELFIKMQESDVPPNVITWN---------- 433
                                  Q GY   A E    M E     + +T++          
Sbjct: 477  DMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLS 536

Query: 434  -----------VLISGYIQNGN-EDEAVDLFQRMGKNDKV-------------------- 461
                       VL  G+  +G      V+++ + G+ DK                     
Sbjct: 537  HVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVS 596

Query: 462  ----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASN 517
                K    SW S+++GY   G+  + L  FR M       +  T+ +++ ACA      
Sbjct: 597  YKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILE 656

Query: 518  KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
              + +H  V +        V +SLID Y+KSG++  +  +F   +  +I+ W S+I GY 
Sbjct: 657  FGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYA 716

Query: 578  LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
            LHG    A+ LF++M + G+ PN  TFL ++ A S AG+++ G + F  + + Y I P +
Sbjct: 717  LHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGV 776

Query: 638  EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
            EH ++M+DLYGR+G L +   FI    I   +S+W++ L++CR+H N+++     E L  
Sbjct: 777  EHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQ 836

Query: 698  LEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGW 757
            + P D     L+  + A   + ++A +VR L  +   +   GQ WI++K+ ++TFV G  
Sbjct: 837  VAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQRGVKKQPGQSWIQLKDQIHTFVMGDR 896

Query: 758  SESYSDLLYSWLQNVPENVTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFA 808
            S    D +YS+L    + +  R    G           +EEE+ E +   HSEKLA+ F 
Sbjct: 897  SHPQDDEIYSYL----DILIGRLKEIGYSFDVKLVMQDVEEEQGEVLISHHSEKLAVVFG 952

Query: 809  LIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            +I ++     IRI+KN+R+C  CH   KY S +   EI + D    HHFK+G CSCGDYW
Sbjct: 953  IINTANRT-PIRIIKNLRICTDCHNFIKYASQLLDREIIVRDIHRFHHFKHGSCSCGDYW 1011



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 131/536 (24%), Positives = 237/536 (44%), Gaps = 97/536 (18%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
           LL++YAK   +  A+++F+++ +RN  TW+ +I  ++R      V  LF  M   G  P+
Sbjct: 330 LLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPN 389

Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
            +    +L+ C    + + GK +H+ +++ G+     + NS+L +Y+KC    +A R FE
Sbjct: 390 QYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFE 449

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            M+E D V+WN MI  Y + G+ ++                                   
Sbjct: 450 LMNEGDVVSWNIMIGAYLRAGDVEK----------------------------------- 474

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
           +++M +R+       DV +W  ++ G  Q G    AL+    M   G   + VT + A+ 
Sbjct: 475 SLDMFRRLP----YKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALI 530

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV-----FDMIKD 391
             + L  + +G ++H + +K GF  D  + +SL+ MY KC  ++ A  +      D+++ 
Sbjct: 531 LASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRK 590

Query: 392 KD-----------VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS--- 437
            +           + SW SM++GY   G      + F  M    V  ++ T   +IS   
Sbjct: 591 GNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACA 650

Query: 438 ------------GYIQN-GNEDEA------VDLFQRMGKNDKV--------KRNTASWNS 470
                        Y+Q  G+  +A      +D++ + G  D          + N   W S
Sbjct: 651 NAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTS 710

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +I+GY   GQ  +A+G+F +M +    PN VT L VL AC++   +  ++E  GC   R 
Sbjct: 711 MISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSH---AGLIEE--GCRYFRM 765

Query: 531 LESSLPV------MNSLIDTYAKSGNIVYSRT-IFDGMSSKDIITWNSLICGYVLH 579
           ++ +  +        S++D Y ++G++  ++  IF    S     W S +    LH
Sbjct: 766 MKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVWKSFLSSCRLH 821



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 158/375 (42%), Gaps = 87/375 (23%)

Query: 48  IATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGC 106
           +  +GA   + T  ++L+ C   N++ L + +HA+ L    ++DV +   +L +Y KC  
Sbjct: 381 MQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKV 440

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQ------------------RW---------- 138
            + A  +FE M E ++ +W+ MIGAY R                     W          
Sbjct: 441 FEYAERLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQC 500

Query: 139 ---REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
              R  +E  + MV+ G       F   L    +    E G+ +H +V+K G      +R
Sbjct: 501 GYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIR 560

Query: 196 NSVLAVYVKCGKLIWARRFFESM---------------DEKDG-VAWNSMISGYFQIGEN 239
           +S++ +Y KCG++  A      +               + K G V+W SM+SGY   G+ 
Sbjct: 561 SSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKY 620

Query: 240 DEAHRLFDKMCREEIKLGVVTFNILIRS-------------------------------- 267
           ++  + F  M RE + + + T   +I +                                
Sbjct: 621 EDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSL 680

Query: 268 ---YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
              Y++ G  D A  MV R  +    P++  WT MISG+A +G+   A+ LF+EM   G+
Sbjct: 681 IDMYSKSGSLDDAW-MVFRQSN---EPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGI 736

Query: 325 MPNGVTITSAISACT 339
           +PN VT    ++AC+
Sbjct: 737 IPNEVTFLGVLNACS 751



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/437 (22%), Positives = 184/437 (42%), Gaps = 103/437 (23%)

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H+L VK G    +   N L+ +Y+K   +  A+++FD I  ++  +W  +I+G+ +AG 
Sbjct: 311 LHALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFDEIPQRNTQTWTILISGFARAGS 370

Query: 410 CGKAYELFIKMQESDVPPN-----------------------------------VITWNV 434
               + LF +MQ     PN                                   V+  N 
Sbjct: 371 SEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS 430

Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
           ++  Y++    + A  LF+ M + D V     SWN +I  Y + G    +L +FR++   
Sbjct: 431 ILDLYLKCKVFEYAERLFELMNEGDVV-----SWNIMIGAYLRAGDVEKSLDMFRRLP-- 483

Query: 495 CFYPNCV---TILSVLPACAY--------------------------LVASNKV------ 519
             Y + V   TI+  L  C Y                          L+ ++ +      
Sbjct: 484 --YKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELG 541

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM----------------SS 563
           +++HG VL+   +S   + +SL++ Y K G +  +  I   +                  
Sbjct: 542 RQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPK 601

Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
             I++W S++ GYV +G +   L  F  M    +  +  T  +II A + AG+++ G+ V
Sbjct: 602 AGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHV 661

Query: 624 FCSITECYQIIPMIEHY--SAMIDLYGRSGKLEEA-MEFIEDMPIEPDSSIWEALLTACR 680
              +    +I   I+ Y  S++ID+Y +SG L++A M F +    EP+  +W ++++   
Sbjct: 662 HAYVQ---KIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSN--EPNIVMWTSMISGYA 716

Query: 681 IHGNIDLAVLAIERLFD 697
           +HG    A+   E + +
Sbjct: 717 LHGQGMHAIGLFEEMLN 733



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 161/348 (46%), Gaps = 38/348 (10%)

Query: 73  IHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED-----MRERN----- 121
           + L R+LH   L    + D F+++ L+ +Y KCG +D A  +  D     +R+ N     
Sbjct: 538 VELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSY 597

Query: 122 ------LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
                 + +W +M+  Y  + ++ + ++ F LMV++ +  D      I+ AC N G  E 
Sbjct: 598 KEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEF 657

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G+ +H+ V K+G      V +S++ +Y K G L  A   F   +E + V W SMISGY  
Sbjct: 658 GRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYAL 717

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVF 294
            G+   A  LF++M  + I    VTF  ++ + +  G  +      + M ++  I P V 
Sbjct: 718 HGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPGVE 777

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT-ITSA----ISACTDLKALAMGME 349
             T M+  + + G  ++  +         +  NG++ +TS     +S+C   K + MG  
Sbjct: 778 HCTSMVDLYGRAGHLTKTKNF--------IFKNGISHLTSVWKSFLSSCRLHKNVEMGKW 829

Query: 350 IHSLAVKMGFTDD---VLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           +  + +++  +D    VL    L NM +     + A RV  ++  + V
Sbjct: 830 VSEMLLQVAPSDPGAYVL----LSNMCASNHRWDEAARVRSLMHQRGV 873



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 15/237 (6%)

Query: 493 SSCFYPNCVTILSVLPACA--YLVASNK---VKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
           SS FYP        L +C+  +   SN    +  +H   ++     +L   N L+  YAK
Sbjct: 282 SSYFYPPLW-----LQSCSLYHFTLSNSPPPLGTLHALYVKNGSLQTLNPANHLLTLYAK 336

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
           S N+ +++ +FD +  ++  TW  LI G+   G      +LF +M++ G  PN+ T  S+
Sbjct: 337 SNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSV 396

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           +   SL   + LGK V   +      + ++   S ++DLY +    E A    E M  E 
Sbjct: 397 LKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNS-ILDLYLKCKVFEYAERLFELMN-EG 454

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
           D   W  ++ A    G+++ ++    R   L   DV+    I+     CG    AL+
Sbjct: 455 DVVSWNIMIGAYLRAGDVEKSLDMFRR---LPYKDVVSWNTIVDGLLQCGYERHALE 508


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 185/621 (29%), Positives = 324/621 (52%), Gaps = 47/621 (7%)

Query: 290 TP--DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
           TP  +V +WT +ISG A+N    +A+D+F+EM+     PN VTI+S + A  +L  + + 
Sbjct: 82  TPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIA 141

Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
             +H   V+ GF  +V V  +L++MYSK   +  A ++F+ + +++V SWN++++GY   
Sbjct: 142 KSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDH 201

Query: 408 GYCGKAYELFIKMQESDVPPNVITWNVLISG----------------YIQNGNEDEA--- 448
           G+  +A +LF  M+   +  +  T   LI                   I+ G E++    
Sbjct: 202 GFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIK 261

Query: 449 ---VDLFQRMGKNDKVKR--------NTASWNSLIAGYQQLGQKNNALGVFRKMQS-SCF 496
              +D++      D   R        + A+W  ++ G+      + A+  F KM      
Sbjct: 262 TALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNL 321

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
             + + ++ +L +C++  A  + + +H   ++    +++ V +++ID YA  GN+  ++ 
Sbjct: 322 KLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKR 381

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
            F GM  KD++ WN++I G  ++G+   A+DLF QMK  GL P+  TF+S++ A S AGM
Sbjct: 382 FFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGM 441

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           V  G ++F  + +    IP ++HY+ +ID+ GR+G+L+ A  FI +MP +PD  ++  LL
Sbjct: 442 VYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLL 501

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
            ACRIHGNI L     +++F++EP D     L+  +YA+ G  E     R   R    + 
Sbjct: 502 GACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKK 561

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------I 787
             G   IE+   +YTF+ G          Y  ++ + + +  +   +G           +
Sbjct: 562 DPGFSSIEINQEIYTFMAGEKDHPQ----YFKIEGILKGLILKIKKAGYVPNTNVLLQDV 617

Query: 788 EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIF 847
            ++ K++I   HSEK+A+AF L+  ++    IRI KN+R C  CH  +K+VS +    + 
Sbjct: 618 SDDMKKDILYHHSEKMAIAFGLM-RTKPGTIIRITKNLRTCNDCHSASKFVSKVFGRVLV 676

Query: 848 LADSKCLHHFKNGQCSCGDYW 868
           + D+   H F++G CSC DYW
Sbjct: 677 IKDANRFHVFQDGVCSCRDYW 697



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 212/453 (46%), Gaps = 35/453 (7%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           + F+   L++ Y  CG L DA+++F     +N+ +W+ +I   +++  + E +++F  M 
Sbjct: 55  NTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMT 114

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
                P+      +L A  N G     K +H   ++ G      V  +++ +Y K G + 
Sbjct: 115 MGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMG 174

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            AR+ FESM E++ V+WN+++SGY   G ++EA  LF+ M R+ + +   T   LI +  
Sbjct: 175 VARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASL 234

Query: 270 QLGQCDVA-------------------------------MEMVKRMESLGITPDVFTWTC 298
            +G   V                                ++   R+ S     DV  WT 
Sbjct: 235 SVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTL 294

Query: 299 MISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           M++GF+      +A+  F +M     +  + + +   +S+C+   AL  G  +H+LA+K 
Sbjct: 295 MLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKT 354

Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
            F +++ VG+++I+MY+ C  LE A+R F  + +KDV  WN+MIAG    GY   A +LF
Sbjct: 355 CFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLF 414

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
           ++M+ S + P+  T+  ++      G   E + +F  M K      N   +  +I    +
Sbjct: 415 LQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGR 474

Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            GQ + A      M    F P+     ++L AC
Sbjct: 475 AGQLDAAYSFINNMP---FQPDFDVYSTLLGAC 504



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 231/519 (44%), Gaps = 63/519 (12%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLL 98
           EAI V   +     K    T  ++L A  +   I +A+ +H F +    E +VFV+T L+
Sbjct: 105 EAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALV 164

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +Y+K GC+  AR++FE M ERN+ +W+A++  YS      E ++LF LM + GL  D +
Sbjct: 165 DMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFY 224

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
               ++ A  + G  + G  +H  +I+ G    + ++ +++ +YV    +  A R F  M
Sbjct: 225 TIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEM 284

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR-EEIKLGVVTFNILIRSYNQLGQCDVA 277
             KD  AW  M++G+      D A + F+KM   + +KL  +    ++ S +  G    A
Sbjct: 285 FVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSG----A 340

Query: 278 MEMVKRMESLGIT-----------------------------------PDVFTWTCMISG 302
           ++  +R+ +L I                                     DV  W  MI+G
Sbjct: 341 LQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAG 400

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
              NG  + A+DLF +M   G+ P+  T  S + AC+    +  G++I    VK      
Sbjct: 401 NGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIP 460

Query: 363 VLVGNS-LINMYSKCEELEAAERVFDMI---KDKDVYSWNSMIAGYCQA-GYCGKAYELF 417
            L   + +I++  +  +L+AA    + +    D DVY   S + G C+  G     +E+ 
Sbjct: 461 NLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVY---STLLGACRIHGNIKLGHEIS 517

Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN-------- 469
            K+ E +  PN   + VL+S         E V + +   ++ ++K++    +        
Sbjct: 518 QKIFEME--PNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIY 575

Query: 470 SLIAGYQQLGQKNNALGVFR----KMQSSCFYPNCVTIL 504
           + +AG +   Q     G+ +    K++ + + PN   +L
Sbjct: 576 TFMAGEKDHPQYFKIEGILKGLILKIKKAGYVPNTNVLL 614



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 118/517 (22%), Positives = 228/517 (44%), Gaps = 83/517 (16%)

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
           D +  + +H+ +I  G++    + NS++  YV CG L  A++ F     K+ V+W  +IS
Sbjct: 36  DLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILIS 95

Query: 232 GYFQIGEND---EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA----------- 277
           G   + +ND   EA  +F +M     K   VT + ++ ++  LG   +A           
Sbjct: 96  G---LAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG 152

Query: 278 -----------MEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFK 317
                      ++M  +   +G+   +F         +W  ++SG++ +G + +A+DLF 
Sbjct: 153 FEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFN 212

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
            M   G++ +  TI S I A   +  L +G  IH   ++ G+ +D  +  +L+++Y    
Sbjct: 213 LMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHN 272

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ---------------- 421
            ++ A RVF  +  KDV +W  M+ G+    +  +A + F KM                 
Sbjct: 273 CVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGIL 332

Query: 422 --------------------ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
                               ++    N+   + +I  Y   GN ++A   F  MG+ D V
Sbjct: 333 SSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVV 392

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
                 WN++IAG    G   +A+ +F +M+ S   P+  T +SVL AC++     +  +
Sbjct: 393 -----CWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQ 447

Query: 522 IHGCVLRRSLE-SSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
           I   +++ S +  +L     +ID   ++G +  + +  + M    D   +++L+    +H
Sbjct: 448 IFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIH 507

Query: 580 GFWHAALDLFDQMKSFGLKPN-RGTFLSIILAHSLAG 615
           G      ++    K F ++PN  G ++ +   ++LAG
Sbjct: 508 GNIKLGHEI--SQKIFEMEPNDAGYYVLLSNMYALAG 542



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 171/390 (43%), Gaps = 38/390 (9%)

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV 385
           P   +  S +    DLK L    +IH+  +  G T +  + NSL+N Y  C  L  A+++
Sbjct: 22  PLAQSHASILRKLKDLKPL---QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQI 78

Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ---- 441
           F     K+V SW  +I+G  +     +A ++F +M   +  PN +T + ++  +      
Sbjct: 79  FHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLI 138

Query: 442 ---------------NGN---EDEAVDLFQRMG--------KNDKVKRNTASWNSLIAGY 475
                           GN   E   VD++ + G             +RN  SWN++++GY
Sbjct: 139 RIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGY 198

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
              G    A+ +F  M+      +  TI+S++PA   +        IHG ++R   E+  
Sbjct: 199 SDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDK 258

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            +  +L+D Y     +  +  +F  M  KD+  W  ++ G+     W  A+  F++M   
Sbjct: 259 HIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGI 318

Query: 596 -GLKPNRGTFLSIILAHSLAGMVDLGKKVFC-SITECYQIIPMIEHYSAMIDLYGRSGKL 653
             LK +    + I+ + S +G +  G++V   +I  C+     +   SA+ID+Y   G L
Sbjct: 319 QNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVG--SAVIDMYANCGNL 376

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHG 683
           E+A  F   M  E D   W A++    ++G
Sbjct: 377 EDAKRFFYGMG-EKDVVCWNAMIAGNGMNG 405


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 197/649 (30%), Positives = 326/649 (50%), Gaps = 44/649 (6%)

Query: 258 VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFK 317
           V   N LI  Y+++G   +A  +  ++E+     DV +W+ MI  + ++G   +ALDL +
Sbjct: 159 VFVCNALIMMYSEVGSLALARLLFDKIEN----KDVVSWSTMIRSYDRSGLLDEALDLLR 214

Query: 318 EMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG--FTDDVLVGNSLINMYSK 375
           +M  + V P+ + + S      +L  L +G  +H+  ++ G      V +  +LI+MY K
Sbjct: 215 DMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVK 274

Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
           CE L  A RVFD +    + SW +MIA Y       +   LF+KM    + PN IT   L
Sbjct: 275 CENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSL 334

Query: 436 I-----SGYIQNGNEDEA-----------------VDLFQRMGKNDKVK--------RNT 465
           +     +G ++ G    A                 +D++ + G     +        ++ 
Sbjct: 335 VKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDL 394

Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGC 525
             W+++I+ Y Q    + A  +F  M      PN  T++S+L  CA   +    K IH  
Sbjct: 395 MMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSY 454

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAA 585
           + ++ ++  + +  S +D YA  G+I  +  +F   + +DI  WN++I G+ +HG   AA
Sbjct: 455 IDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAA 514

Query: 586 LDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMID 645
           L+LF++M++ G+ PN  TF+  + A S +G++  GK++F  +   +   P +EHY  M+D
Sbjct: 515 LELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVD 574

Query: 646 LYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLI 705
           L GR+G L+EA E I+ MP+ P+ +++ + L AC++H NI L   A ++   LEP     
Sbjct: 575 LLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGY 634

Query: 706 QRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLL 765
             L+  IYA   +  D   +R+  ++       G   IEV  L++ F+ G      +  +
Sbjct: 635 NVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIMGDREHPDAKKV 694

Query: 766 YSWLQNVPENVT-ARSSHSGLC----IEEEEKEEISGIHSEKLALAFALIGSSQAPHT-I 819
           Y  +  + E +  A  +    C    I++E+K      HSEKLA+A+ LI  S AP   I
Sbjct: 695 YEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGLI--STAPGVPI 752

Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           RIVKN+R+C  CH   K +S ++  EI + D    HHFK G CSC DYW
Sbjct: 753 RIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 137/596 (22%), Positives = 256/596 (42%), Gaps = 75/596 (12%)

Query: 51  QGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV-FVKTKLLSVYAKCGCLDD 109
           Q      +  +   Q+    N  H+ ++LH  LN   ++   F+KT          C   
Sbjct: 24  QNTNQYHSPTLKFTQSQPKPNVPHIQQELHINLNETQQLHGHFIKTS-------SNCSYR 76

Query: 110 AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGN 169
                 +    N    S +I +Y ++    +  +++  M       D+F+ P +L+AC  
Sbjct: 77  VPLAALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCL 136

Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
              F  G+ +H  V+K G      V N+++ +Y + G L  AR  F+ ++ KD V+W++M
Sbjct: 137 IPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTM 196

Query: 230 ISGYFQIGENDEAHRLFDKMCREEIK---LGVVTFNILIRSYN--QLGQ----------- 273
           I  Y + G  DEA  L   M    +K   +G+++   ++      +LG+           
Sbjct: 197 IRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGK 256

Query: 274 --------CDVAMEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDLF 316
                   C   ++M  + E+L     VF         +WT MI+ +      ++ + LF
Sbjct: 257 CGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLF 316

Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
            +M   G+ PN +T+ S +  C    AL +G  +H+  ++ GFT  +++  + I+MY KC
Sbjct: 317 VKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKC 376

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
            ++ +A  VFD  K KD+  W++MI+ Y Q     +A+++F+ M    + PN  T   L+
Sbjct: 377 GDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLL 436

Query: 437 -----SGYIQNGN-----------------EDEAVDLFQRMGKNDKVK--------RNTA 466
                +G ++ G                  +   VD++   G  D           R+ +
Sbjct: 437 MICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDIS 496

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY--LVASNKVKEIHG 524
            WN++I+G+   G    AL +F +M++    PN +T +  L AC++  L+   K +  H 
Sbjct: 497 MWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGK-RLFHK 555

Query: 525 CVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLH 579
            V        +     ++D   ++G +  +  +   M  + +I  + S +    LH
Sbjct: 556 MVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLH 611



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 209/469 (44%), Gaps = 46/469 (9%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDV 91
           +G L+EA+ +L  +     K      I++     +   + L + +HA++       +  V
Sbjct: 203 SGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGV 262

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            + T L+ +Y KC  L  AR VF+ + + ++ +W+AMI AY       E V LF  M+ +
Sbjct: 263 PLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGE 322

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+FP++     +++ CG  G  E GKL+H+  ++ G +    +  + + +Y KCG +  A
Sbjct: 323 GMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSA 382

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC--------------------- 250
           R  F+S   KD + W++MIS Y Q    DEA  +F  M                      
Sbjct: 383 RSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKA 442

Query: 251 --------------REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
                         ++ IK  ++     +  Y   G  D A     R+ +     D+  W
Sbjct: 443 GSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTA----HRLFAEATDRDISMW 498

Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI-HSLAV 355
             MISGFA +G    AL+LF+EM  +GV PN +T   A+ AC+    L  G  + H +  
Sbjct: 499 NAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVH 558

Query: 356 KMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
           + GFT  V     ++++  +   L EA E +  M    ++  + S +A  C+     K  
Sbjct: 559 EFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAA-CKLHKNIKLG 617

Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
           E   K Q   + P+   +NVL+S    + N    V   +R  K++ + +
Sbjct: 618 EWAAK-QFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVK 665



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 135/285 (47%), Gaps = 23/285 (8%)

Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
           N A  + LI  Y +     +A  ++  M+ +    +   I SVL AC  + +    +E+H
Sbjct: 88  NAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVH 147

Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
           G V++      + V N+LI  Y++ G++  +R +FD + +KD+++W+++I  Y   G   
Sbjct: 148 GFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLD 207

Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD--LGKKVFCSIT---ECYQI-IPMI 637
            ALDL   M    +KP+    +SI   H LA + D  LGK +   +    +C +  +P+ 
Sbjct: 208 EALDLLRDMHVMRVKPSEIGMISI--THVLAELADLKLGKAMHAYVMRNGKCGKSGVPLC 265

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI--WEALLTACRIHGNIDLAVLAIERL 695
              +A+ID+Y +   L  A    + +     +SI  W A++ A     N++  V    RL
Sbjct: 266 ---TALIDMYVKCENLAYARRVFDGL---SKASIISWTAMIAAYIHCNNLNEGV----RL 315

Query: 696 FDLEPGDVLIQRLI--LQIYAICGKPEDALKVRKLERENTRRNSF 738
           F    G+ +    I  L +   CG    AL++ KL    T RN F
Sbjct: 316 FVKMLGEGMFPNEITMLSLVKECGT-AGALELGKLLHAFTLRNGF 359


>gi|79527297|ref|NP_198857.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171829|sp|Q9FND6.1|PP411_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g40410, mitochondrial; Flags: Precursor
 gi|10178153|dbj|BAB11598.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|17065126|gb|AAL32717.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|30725418|gb|AAP37731.1| At5g40410 [Arabidopsis thaliana]
 gi|332007162|gb|AED94545.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 608

 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 191/596 (32%), Positives = 313/596 (52%), Gaps = 49/596 (8%)

Query: 315 LFKEMSFVGVMPNGVT-ITSAISACTDLK--ALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
              + SFV  +   V+ + +A+ +C  ++   L     + S++ + GF  D LVG  L  
Sbjct: 20  FLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRL 79

Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP--PNV 429
            +  C     AE++FD + ++D+ SWNS+I+GY   GY GK +E+  +M  S+V   PN 
Sbjct: 80  GHDVC-----AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNE 134

Query: 430 ITWNVLISGYIQNGNEDEAV---DLFQRMGKNDKVK------------------------ 462
           +T+  +IS  +  G+++E      L  + G  ++VK                        
Sbjct: 135 VTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFED 194

Query: 463 ---RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
              +N  SWN++I  + Q G     L  F   +     P+  T L+VL +C  +      
Sbjct: 195 LSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLA 254

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
           + IHG ++      +  +  +L+D Y+K G +  S T+F  ++S D + W +++  Y  H
Sbjct: 255 QGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATH 314

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
           GF   A+  F+ M  +G+ P+  TF  ++ A S +G+V+ GK  F ++++ Y+I P ++H
Sbjct: 315 GFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDH 374

Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
           YS M+DL GRSG L++A   I++MP+EP S +W ALL ACR++ +  L   A ERLF+LE
Sbjct: 375 YSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELE 434

Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSE 759
           P D     ++  IY+  G  +DA ++R L ++     + G  +IE  N ++ FV G WS 
Sbjct: 435 PRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSH 494

Query: 760 SYSDLLYSWLQNVPENVTARSSHSGLC------IEEEEKEEISGIHSEKLALAFA-LIGS 812
             S+ +   L+ + + + +   +          + E+ KEE+   HSEK+A+AF  L+ S
Sbjct: 495 PESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVS 554

Query: 813 SQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
              P  IR  KN+R+C  CHETAK +S++    I + DSK  HHF +G CSC DYW
Sbjct: 555 PMEPIIIR--KNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 163/382 (42%), Gaps = 38/382 (9%)

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           ++ A  +C   E  +L+H  V+K        + + ++  Y++ G  + A + F+ M E+D
Sbjct: 37  LIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERD 96

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEI---------------------------- 254
            V+WNS+ISGY   G   +   +  +M   E+                            
Sbjct: 97  LVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCI 156

Query: 255 -----KLGVVTFNILIRSY-NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR 308
                K GV+    ++ ++ N  G+        K  E L I  ++ +W  MI    QNG 
Sbjct: 157 HGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSI-KNLVSWNTMIVIHLQNGL 215

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
             + L  F     VG  P+  T  + + +C D+  + +   IH L +  GF+ +  +  +
Sbjct: 216 AEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTA 275

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           L+++YSK   LE +  VF  I   D  +W +M+A Y   G+   A + F  M    + P+
Sbjct: 276 LLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPD 335

Query: 429 VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
            +T+  L++    +G  +E    F+ M K  ++      ++ ++    + G   +A G+ 
Sbjct: 336 HVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLI 395

Query: 489 RKMQSSCFYPNCVTILSVLPAC 510
           ++M      P+     ++L AC
Sbjct: 396 KEMP---MEPSSGVWGALLGAC 414



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 147/316 (46%), Gaps = 37/316 (11%)

Query: 58  NTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           ++ I  +++C+   SI L R LH   +  V+    F+  +L+  Y + G    A ++F++
Sbjct: 35  SSLIAAVKSCV---SIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDE 91

Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMV--QDGLFPDDFLFPKILQACGNCGDFE 174
           M ER+L +W+++I  YS      +  E+   M+  + G  P++  F  ++ AC   G  E
Sbjct: 92  MPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKE 151

Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
            G+ +H LV+K G+    +V N+ +  Y K G L  + + FE +  K+ V+WN+MI  + 
Sbjct: 152 EGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHL 211

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM-------------- 280
           Q G  ++    F+   R   +    TF  ++RS   +G   +A  +              
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271

Query: 281 -----------VKRMESLG------ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
                      + R+E          +PD   WT M++ +A +G    A+  F+ M   G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331

Query: 324 VMPNGVTITSAISACT 339
           + P+ VT T  ++AC+
Sbjct: 332 ISPDHVTFTHLLNACS 347



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/371 (23%), Positives = 168/371 (45%), Gaps = 20/371 (5%)

Query: 34  GNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFLNLVTEIDV 91
           G G L +   VL  +       R N  T+++++ AC+   S    R +H    LV +  V
Sbjct: 109 GRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHG---LVMKFGV 165

Query: 92  FVKTKLLSV----YAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
             + K+++     Y K G L  + ++FED+  +NL +W+ MI  + ++    + +  F +
Sbjct: 166 LEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNM 225

Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
             + G  PD   F  +L++C + G     + +H L++  G S  + +  ++L +Y K G+
Sbjct: 226 SRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGR 285

Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
           L  +   F  +   D +AW +M++ Y   G   +A + F+ M    I    VTF  L+ +
Sbjct: 286 LEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNA 345

Query: 268 YNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            +  G  +      + M +   I P +  ++CM+    ++G    A  L KEM    + P
Sbjct: 346 CSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMP---MEP 402

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI---NMYSKCEELEAAE 383
           +     + + AC   K   +G +    A +  F  +   G + +   N+YS     + A 
Sbjct: 403 SSGVWGALLGACRVYKDTQLGTK----AAERLFELEPRDGRNYVMLSNIYSASGLWKDAS 458

Query: 384 RVFDMIKDKDV 394
           R+ +++K K +
Sbjct: 459 RIRNLMKQKGL 469


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  315 bits (807), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 202/639 (31%), Positives = 324/639 (50%), Gaps = 66/639 (10%)

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
           +W   +    ++    +A+  + EM+  G  P+     + + A + L+ L  G +IH+ A
Sbjct: 59  SWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAA 118

Query: 355 VKMGF-TDDVLVGNSLINMYSKCE--------------------ELEAAERVFDMIKDKD 393
           VK G+ +  V V N+L+NMY KC                      ++ ++ +F+   D+D
Sbjct: 119 VKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRD 178

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT-WNVL--------------ISG 438
           + SWN+MI+ + Q+    +A   F  M    V  + +T  +VL              I  
Sbjct: 179 MVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHA 238

Query: 439 YIQNGNE--------DEAVDLF---QRMGKNDKV-----KRNTASWNSLIAGYQQLGQKN 482
           Y+   N+           VD++   +++    +V      R    WN++I+GY + G   
Sbjct: 239 YVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDE 298

Query: 483 NALGVFRKM-QSSCFYPNCVTILSVLPACAY-LVASNKVKEIHGCVLRRSLESSLPVMNS 540
            AL +F +M + +   PN  T+ SV+PAC + L A  K KEIH   +R  L S + V ++
Sbjct: 299 KALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSA 358

Query: 541 LIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM-----KSF 595
           L+D YAK G +  SR +F+ M +K++ITWN LI    +HG    AL+LF  M     +  
Sbjct: 359 LVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGG 418

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
             KPN  TF+++  A S +G++  G  +F  +   + + P  +HY+ ++DL GR+G+LEE
Sbjct: 419 EAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEE 478

Query: 656 AMEFIEDMPIEPDS-SIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYA 714
           A E +  MP E D    W +LL ACRIH N++L  +A + L  LEP       L+  IY+
Sbjct: 479 AYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYS 538

Query: 715 ICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPE 774
             G    A++VRK  R+   +   G  WIE ++ V+ F+ G  S   S+ L+ +L+ + E
Sbjct: 539 SAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFLETLSE 598

Query: 775 NVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCV 829
            +               ++E+EKE +   HSEKLA+AF ++ +     TIR+ KN+R+C 
Sbjct: 599 KMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGT-TIRVAKNLRVCN 657

Query: 830 HCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
            CH   K++S +   EI + D +  HHFK G CSCGDYW
Sbjct: 658 DCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 138/559 (24%), Positives = 245/559 (43%), Gaps = 126/559 (22%)

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
           R+  +W   + + +R   +RE +  +  M   G  PD+F FP +L+A     D + G+ +
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 180 HSLVIKLGM-SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           H+  +K G  S    V N+++ +Y KCG +    + F +         N++++ Y ++G 
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGI--GDKTFTN---------NALMAMYAKLGR 163

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
            D++  LF+                                         +  D+ +W  
Sbjct: 164 VDDSKALFESF---------------------------------------VDRDMVSWNT 184

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           MIS F+Q+ R S+AL  F+ M   GV  +GVTI S + AC+ L+ L +G EIH+  ++  
Sbjct: 185 MISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNN 244

Query: 359 -FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
              ++  VG++L++MY  C ++E+  RVFD I  + +  WN+MI+GY + G   KA  LF
Sbjct: 245 DLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILF 304

Query: 418 IKM-QESDVPPNVITWNVLIS------GYIQNGNEDEA-----------------VDLFQ 453
           I+M + + + PN  T   ++         I  G E  A                 VD++ 
Sbjct: 305 IEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYA 364

Query: 454 RMG--------KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC-----FYPNC 500
           + G         N+   +N  +WN LI      G+   AL +F+ M +         PN 
Sbjct: 365 KCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNE 424

Query: 501 VTILSVLPACAY--LVASN-----KVKEIHG---------CV---LRRS--LESSLPVMN 539
           VT ++V  AC++  L++       ++K  HG         CV   L R+  LE +  ++N
Sbjct: 425 VTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVN 484

Query: 540 SLIDTYAKSGN--------IVYSRTIFDGMSSKDIITWNSLICG-YVL-------HGFWH 583
           ++   + K G          ++       +++K+++     +   YVL        G W+
Sbjct: 485 TMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWN 544

Query: 584 AALDLFDQMKSFGLKPNRG 602
            A+++   M+  G+K   G
Sbjct: 545 KAMEVRKNMRQMGVKKEPG 563



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 144/304 (47%), Gaps = 10/304 (3%)

Query: 26  DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
           +T +     + R +EA+     +  +G ++   T  ++L AC     + + +++HA++  
Sbjct: 183 NTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLR 242

Query: 86  VTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
             ++  + FV + L+ +Y  C  ++  R VF+ +  R +  W+AMI  Y+R+    + + 
Sbjct: 243 NNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALI 302

Query: 144 LFFLMVQ-DGLFPDDFLFPKILQAC-GNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
           LF  M++  GL P+      ++ AC  +      GK +H+  I+  ++    V ++++ +
Sbjct: 303 LFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDM 362

Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE-----EIKL 256
           Y KCG L  +RR F  M  K+ + WN +I      G+ +EA  LF  M  E     E K 
Sbjct: 363 YAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKP 422

Query: 257 GVVTFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDL 315
             VTF  +  + +  G     + +  RM+   G+ P    + C++    + G+  +A +L
Sbjct: 423 NEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYEL 482

Query: 316 FKEM 319
              M
Sbjct: 483 VNTM 486



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 120/533 (22%), Positives = 222/533 (41%), Gaps = 84/533 (15%)

Query: 14  SLLTKKSNP------RFRDTHLDFLCGNGRLN---EAITVLDSIATQGAKVRRNTYINLL 64
           S LT K+ P      R   + +D L    R N   EAI+    +   GA+     +  +L
Sbjct: 40  SPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVL 99

Query: 65  QACIDSNSIHLARKLHA-----------------FLNLVTEI-----DVFVKTKLLSVYA 102
           +A      +    ++HA                  +N+  +        F    L+++YA
Sbjct: 100 KAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYA 159

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
           K G +DD++ +FE   +R++ +W+ MI ++S+  R+ E +  F LMV +G+  D      
Sbjct: 160 KLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIAS 219

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA-VYVKCGKLIWARRFFESMDEK 221
           +L AC +    + GK +H+ V++           S L  +Y  C ++   RR F+ +  +
Sbjct: 220 VLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGR 279

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKM-------------------------------- 249
               WN+MISGY + G +++A  LF +M                                
Sbjct: 280 RIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKE 339

Query: 250 -----CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFA 304
                 R  +   +   + L+  Y + G  +++  +   M +     +V TW  +I    
Sbjct: 340 IHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPN----KNVITWNVLIMACG 395

Query: 305 QNGRTSQALDLFKEMSFVG-----VMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMG 358
            +G+  +AL+LFK M           PN VT  +  +AC+    ++ G+ + + +    G
Sbjct: 396 MHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHG 455

Query: 359 FTDDVLVGNSLINMYSKCEELEAA-ERVFDMIKDKD-VYSWNSMIAGYCQAGYCGKAYEL 416
                     ++++  +  +LE A E V  M  + D V +W+S++ G C+     +  E+
Sbjct: 456 VEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLL-GACRIHQNVELGEV 514

Query: 417 FIKMQESDVPPNVITWNVLISG-YIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
             K     + PNV +  VL+S  Y   G  ++A+++ + M +    K    SW
Sbjct: 515 AAK-NLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSW 566



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/323 (21%), Positives = 134/323 (41%), Gaps = 66/323 (20%)

Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
           K     R+TASW   +    +      A+  + +M  S   P+     +VL A + L   
Sbjct: 49  KPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDL 108

Query: 517 NKVKEIHGCVLRRSL-ESSLPVMNSLIDTYAKSGNI------------VY--------SR 555
              ++IH   ++     SS+ V N+L++ Y K G I            +Y        S+
Sbjct: 109 KTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSK 168

Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
            +F+    +D+++WN++I  +     +  AL  F  M   G++ +  T  S++ A S   
Sbjct: 169 ALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLE 228

Query: 616 MVDLGKKVFCSITE--------------------CYQIIP-----------MIEHYSAMI 644
            +D+GK++   +                      C Q+              IE ++AMI
Sbjct: 229 RLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMI 288

Query: 645 DLYGRSGKLEEAM----EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER------ 694
             Y R+G  E+A+    E I+   + P+++   +++ AC +H    LA +A  +      
Sbjct: 289 SGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPAC-VH---SLAAIAKGKEIHAYA 344

Query: 695 LFDLEPGDVLIQRLILQIYAICG 717
           + ++   D+ +   ++ +YA CG
Sbjct: 345 IRNMLASDITVGSALVDMYAKCG 367


>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 202/617 (32%), Positives = 311/617 (50%), Gaps = 61/617 (9%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           L RSY  LG    ++ +  R  +    P+VF WT +I+  A       AL  + +M    
Sbjct: 61  LQRSYASLGHLHHSVTLFHRTPN----PNVFLWTHIINAHAHFDLFHHALSYYSQMLTHP 116

Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
           + PN  T++S + ACT   A A    +HS A+K G +  + V   L++ Y++  ++ +A+
Sbjct: 117 IQPNAFTLSSLLKACTLHPARA----VHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQ 172

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
           +                               LF  M E     +++++  +++ Y ++G
Sbjct: 173 K-------------------------------LFDAMPER----SLVSYTAMLTCYAKHG 197

Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC-------F 496
              EA  LF+ MG  D V      WN +I GY Q G  N AL  FRKM            
Sbjct: 198 MLPEARVLFEGMGMKDVV-----CWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKV 252

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            PN +T+++VL +C  + A    K +H  V    ++ ++ V  +L+D Y K G++  +R 
Sbjct: 253 RPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARK 312

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           +FD M  KD++ WNS+I GY +HGF   AL LF +M   G+KP+  TF++++ A + AG+
Sbjct: 313 VFDVMEGKDVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGL 372

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           V  G +VF S+ + Y + P +EHY  M++L GR+G+++EA + +  M +EPD  +W  LL
Sbjct: 373 VSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLL 432

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
            ACRIH N+ L     E L            L+  +YA         KVR + + +    
Sbjct: 433 WACRIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEK 492

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEE 791
             G   IEVKN V+ FV G      S  +YS L+ +       + T ++      I E+E
Sbjct: 493 EPGCSSIEVKNRVHEFVAGDRRHPRSKDIYSMLEKMNGWLKERHYTPKTDAVLHDIGEQE 552

Query: 792 KEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADS 851
           KE+   +HSEKLALAF LI +S     I+IVKN+R+C+ CH   K +S +   +I + D 
Sbjct: 553 KEQSLEVHSEKLALAFGLISTSPGA-AIKIVKNLRVCLDCHAVMKIMSKISGRKIIMRDR 611

Query: 852 KCLHHFKNGQCSCGDYW 868
              HHF+NG CSC DYW
Sbjct: 612 NRFHHFENGSCSCRDYW 628



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 205/457 (44%), Gaps = 54/457 (11%)

Query: 62  NLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           NL     +S S H   ++HA  L         +  KL   YA  G L  +  +F      
Sbjct: 25  NLALLIDNSKSTHHLLQIHAALLRRGLHHHPILNFKLQRSYASLGHLHHSVTLFHRTPNP 84

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
           N++ W+ +I A++    +   +  +  M+   + P+ F    +L+AC         + +H
Sbjct: 85  NVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKAC----TLHPARAVH 140

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
           S  IK G+S    V   ++  Y + G +  A++ F++M E+  V++ +M++ Y + G   
Sbjct: 141 SHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLP 200

Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
           EA  LF+ M  ++    VV +N++                                   I
Sbjct: 201 EARVLFEGMGMKD----VVCWNVM-----------------------------------I 221

Query: 301 SGFAQNGRTSQALDLFKE-------MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
            G+AQ+G  ++AL  F++            V PN +T+ + +S+C  + AL  G  +HS 
Sbjct: 222 DGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSY 281

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
               G   +V VG +L++MY KC  LE A +VFD+++ KDV +WNSMI GY   G+  +A
Sbjct: 282 VENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEA 341

Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
            +LF +M    V P+ IT+  +++     G   +  ++F  M     ++     +  ++ 
Sbjct: 342 LQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVN 401

Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
              + G+   A  + R M+     P+ V   ++L AC
Sbjct: 402 LLGRAGRMQEAYDLVRSMEVE---PDPVLWGTLLWAC 435



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 180/400 (45%), Gaps = 54/400 (13%)

Query: 38  LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTK 96
            + A++    + T   +    T  +LL+AC    ++H AR +H+  +       ++V T 
Sbjct: 102 FHHALSYYSQMLTHPIQPNAFTLSSLLKAC----TLHPARAVHSHAIKFGLSSHLYVSTG 157

Query: 97  LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM-------- 148
           L+  YA+ G +  A+++F+ M ER+L +++AM+  Y++     E   LF  M        
Sbjct: 158 LVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCW 217

Query: 149 -------VQDG-----------------------LFPDDFLFPKILQACGNCGDFEAGKL 178
                   Q G                       + P++     +L +CG  G  E GK 
Sbjct: 218 NVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKW 277

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +HS V   G+    RV  +++ +Y KCG L  AR+ F+ M+ KD VAWNSMI GY   G 
Sbjct: 278 VHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGIHGF 337

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDVFTWT 297
           +DEA +LF +MC   +K   +TF  ++ +    G      E+   M +  G+ P V  + 
Sbjct: 338 SDEALQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYG 397

Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
           CM++   + GR  +A DL + M    V P+ V   + + AC     +++G EI  + V  
Sbjct: 398 CMVNLLGRAGRMQEAYDLVRSME---VEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSN 454

Query: 358 GFTDD---VLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           G       VL    L NMY+         +V  M+K   V
Sbjct: 455 GLASSGTYVL----LSNMYAAARNWVGVAKVRSMMKGSGV 490



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 98/219 (44%), Gaps = 29/219 (13%)

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMN-SLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLI 573
           +++ + +IH  +LRR L    P++N  L  +YA  G++ +S T+F    + ++  W  +I
Sbjct: 35  STHHLLQIHAALLRRGLHHH-PILNFKLQRSYASLGHLHHSVTLFHRTPNPNVFLWTHII 93

Query: 574 CGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILA---------HSLAGMVDLGKKVF 624
             +     +H AL  + QM +  ++PN  T  S++ A         HS A    L   ++
Sbjct: 94  NAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACTLHPARAVHSHAIKFGLSSHLY 153

Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
            S              + ++D Y R G +  A +  + MP E     + A+LT    HG 
Sbjct: 154 VS--------------TGLVDAYARGGDVASAQKLFDAMP-ERSLVSYTAMLTCYAKHGM 198

Query: 685 IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDAL 723
           +  A +  E    +   DV+   +++  YA  G P +AL
Sbjct: 199 LPEARVLFE---GMGMKDVVCWNVMIDGYAQHGCPNEAL 234


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 235/830 (28%), Positives = 398/830 (47%), Gaps = 96/830 (11%)

Query: 125 WSAMIGAYSRDQR--WREVVELFFLMVQDGLFPDDFLFPKILQACG--NCGDFEAGKLMH 180
           W+A++  +SR  R      +    L   +G+ PD F  P   ++CG    G   AG+ +H
Sbjct: 32  WNALLADHSRAGRHADALALLPPLLAASEGIAPDRFTLPPAARSCGFLRVGAAAAGRQVH 91

Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDE--KDGVAWNSMISGYFQIGE 238
           +L  KLG+     V NS++++Y +CG++  A + F  + +  ++ V+WN++++     G+
Sbjct: 92  ALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAALS--GD 149

Query: 239 NDEAHRLF-------DKMCREEIKLGVVTF-----------------------------N 262
                 LF         M  E   + V+                               N
Sbjct: 150 PRRGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGN 209

Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
            L+  Y + G      E+     +    P V +W  M+  + +N     A  L ++M   
Sbjct: 210 ALVDMYAKCG------ELADAERAFPEAPSVVSWNVMLGAYTRNREAGAAFGLLRDMQIK 263

Query: 323 --GVMP-NGVTITSAISACTDLKALAMGMEIHSLAVKMGF-TDDVLVGNSLINMYSKCEE 378
             G +P + +T+ S + AC+    L+   E+H+  V+ G       V N+L+  Y +C  
Sbjct: 264 EHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGR 323

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES-DVPPNVITWNVLI- 436
           L  A+RVF  I+ K V SWN++I+ + Q      A ELFI+M  +  + P+  +   L+ 
Sbjct: 324 LLHADRVFTDIRRKTVSSWNTLISAHAQQNTAA-AIELFIQMTNACGLKPDGFSIGSLLM 382

Query: 437 --------------SGYI-QNGNEDEAV------DLFQRMGKNDKVKR---------NTA 466
                          G+I +NG E + V        + R  + + + R            
Sbjct: 383 ACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEV 442

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFY-PNCVTILSVLPACAYLVASNKVKEIHGC 525
            W ++I+GY Q G    +L +FR+MQS   +  + ++  S L AC+ L +    KE+H  
Sbjct: 443 LWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGKEMHCF 502

Query: 526 VLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI-ITWNSLICGYVLHGFWHA 584
            L+  L     + +SLID Y+K G +  +RT FD + ++D  ++W ++I GY ++G    
Sbjct: 503 ALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGRE 562

Query: 585 ALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM-IEHYSAM 643
           A++L+ +M+  G++P+  T+L +++A   AGM++ G + F  +   +  I + +EHYS +
Sbjct: 563 AVELYGKMRREGMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCV 622

Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
           I +  R+G+  +A+  + +MP EPD+ I  ++L+AC IHG  +L     ERL +LEP   
Sbjct: 623 IGMLSRAGRFADAVALMAEMPQEPDAKILSSVLSACHIHGEAELGSDVAERLLELEPDKA 682

Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
               L   +YA   + +D  KVRK+ R+       G  WI+V   VY+FV G       +
Sbjct: 683 EHYVLASNMYAGSRRWDDMRKVRKMLRDAGIAKEPGCSWIDVAGKVYSFVAGENPHPEME 742

Query: 764 LLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
            +    +++ E +        ++     +EEEEK E    HSEK A+ F L+  +  P T
Sbjct: 743 QVRGMWRSLEERIREIGYVPDTTVVLHELEEEEKVEALWWHSEKQAVTFGLL-RTATPAT 801

Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +R+ KNIRMC  CH  A+ +S +   +I + D K  HHF+ G CSCGDYW
Sbjct: 802 VRVFKNIRMCKDCHNAARLISKVTGRDIVVRDKKRFHHFRGGICSCGDYW 851



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 233/512 (45%), Gaps = 59/512 (11%)

Query: 46  DSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKC 104
           D +   G  V   T + +L  C         R +H        +    V   L+ +YAKC
Sbjct: 159 DCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAPARVGNALVDMYAKC 218

Query: 105 GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM-----VQDGLFP-DDF 158
           G L DA   F +    ++ +W+ M+GAY+R+   RE    F L+      + G  P D+ 
Sbjct: 219 GELADAERAFPEAP--SVVSWNVMLGAYTRN---REAGAAFGLLRDMQIKEHGSVPADEI 273

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR-RVRNSVLAVYVKCGKLIWARRFFES 217
               +L AC    +    + +H+  ++ G+     +V N+++A Y +CG+L+ A R F  
Sbjct: 274 TVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCGRLLHADRVFTD 333

Query: 218 MDEKDGVAWNSMISGY-------------------------FQIGE-----NDEAHRLFD 247
           +  K   +WN++IS +                         F IG       D  H L  
Sbjct: 334 IRRKTVSSWNTLISAHAQQNTAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHV 393

Query: 248 K-----MCREEIKLGVVTFNILIRSYNQLGQCD-VAMEMVKRMESLGITPDVFTWTCMIS 301
           K     + R  ++   V    L+ +Y +  + + +A  +   ME  G       W  MIS
Sbjct: 394 KATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFDAMEEKG----EVLWIAMIS 449

Query: 302 GFAQNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           G++QNG   ++L LF+EM  V G   + ++ TSA+ AC++L ++ +G E+H  A+K    
Sbjct: 450 GYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKADLC 509

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV-YSWNSMIAGYCQAGYCGKAYELFIK 419
           DD  + +SLI+MYSKC  +E A   FD +K +D   SW +MI GY   G   +A EL+ K
Sbjct: 510 DDPFLSSSLIDMYSKCGFVEDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGK 569

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM-GKNDKVKRNTASWNSLIAGYQQL 478
           M+   + P+  T+  L+      G  +E +  F  M   + K++     ++ +I    + 
Sbjct: 570 MRREGMEPDEFTYLGLLMACGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRA 629

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           G+  +A+ +  +M      P+   + SVL AC
Sbjct: 630 GRFADAVALMAEMPQE---PDAKILSSVLSAC 658



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 137/521 (26%), Positives = 221/521 (42%), Gaps = 100/521 (19%)

Query: 76  ARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE--RNLYTWSAMIGAY 132
            R++HA    L    D FV   L+S+Y +CG ++DA +VF  + +  RN+ +W+A++ A 
Sbjct: 87  GRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRVEDAEKVFGGIPDAARNIVSWNALMAAL 146

Query: 133 SRDQRWREVVELFF-LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCV 191
           S D R    +ELF   +V  G   D+     +L  C   G  E G+ +H L  K G    
Sbjct: 147 SGDPR--RGLELFRDCLVAVGGMVDEATLVTVLPMCAALGWSETGRAVHGLAAKSGWDAP 204

Query: 192 RRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-- 249
            RV N+++ +Y KCG+L  A R F   +    V+WN M+  Y +  E   A  L   M  
Sbjct: 205 ARVGNALVDMYAKCGELADAERAFP--EAPSVVSWNVMLGAYTRNREAGAAFGLLRDMQI 262

Query: 250 -------------------CREEIKLGVV------------------TFNILIRSYNQLG 272
                              C    +L  +                    N L+ +Y + G
Sbjct: 263 KEHGSVPADEITVLSVLPACSGPTELSRLRELHAFTVRRGLDAASDKVPNALVAAYGRCG 322

Query: 273 Q---CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV-GVMPNG 328
           +    D     ++R         V +W  +IS  AQ   T+ A++LF +M+   G+ P+G
Sbjct: 323 RLLHADRVFTDIRRKT-------VSSWNTLISAHAQQN-TAAAIELFIQMTNACGLKPDG 374

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERV-FD 387
            +I S + AC D K L      H   ++ G   D ++  SL++ Y +C   E   RV FD
Sbjct: 375 FSIGSLLMACADPKHLLHVKATHGFILRNGLERDTVIRASLLSAYIRCSRTEYLARVLFD 434

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ-------------------------- 421
            +++K    W +MI+GY Q G  G++ +LF +MQ                          
Sbjct: 435 AMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQSVEGHCSSVISATSALMACSELSSVR 494

Query: 422 ----------ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSL 471
                     ++D+  +    + LI  Y + G  ++A   F R+    K +    SW ++
Sbjct: 495 LGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFVEDARTFFDRL----KARDAKVSWTAM 550

Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
           I GY   G    A+ ++ KM+     P+  T L +L AC +
Sbjct: 551 ITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLMACGH 591


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 194/585 (33%), Positives = 302/585 (51%), Gaps = 50/585 (8%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
            P  FT   +I G+       QA+  ++ M   G+ P+  T  S   +C     L  G +
Sbjct: 40  NPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG---VLCEGKQ 96

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H  + K+GF  D  + N+L+NMYS C  L +A +VFD + +K                 
Sbjct: 97  LHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNK----------------- 139

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
                             +V++W  +I  Y Q     EA+ LF+RM    ++  N   WN
Sbjct: 140 ------------------SVVSWATMIGAYAQWDLPHEAIKLFRRM----EIASNLFCWN 177

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
            +I G+ +      AL +F +MQ S    + VT+ S+L AC +L A    K +H  + + 
Sbjct: 178 IMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKE 237

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            +E  + +  +L+D YAK G+I  +  +F  M  KD++TW +LI G  + G    AL+LF
Sbjct: 238 KIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELF 297

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
            +M+   +KP+  TF+ ++ A S AG+V+ G   F S+   Y I P IEHY  M+D+ GR
Sbjct: 298 HEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGR 357

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           +G++ EA + I++MP+ PD  +   LL+ACRIHGN+ +A  A ++L +L+P +     L+
Sbjct: 358 AGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLL 417

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWL 769
             IY+     E A K+R+L  E   +   G   IEV  +V+ FV G  S   S  +Y  L
Sbjct: 418 SNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETL 477

Query: 770 QNVPENVTARS-----SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRIVK 823
            ++   + +       S     ++E+EKE    +HSEKLA+AF L+  S  P T IR+VK
Sbjct: 478 DDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIAFGLL--STTPGTPIRVVK 535

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+R+C  CH   K++S +++ EI + D    HHF  G CSC D+W
Sbjct: 536 NLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDFW 580



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/424 (28%), Positives = 206/424 (48%), Gaps = 46/424 (10%)

Query: 89  IDVFVKTKLLSVYA--KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
           +D F  +K+++  A    G L  AR VF  +     +T +++I  Y+     R+ +  + 
Sbjct: 8   VDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQ 67

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           LM+  GL PD F FP + ++CG   +   GK +H    KLG +    ++N+++ +Y  CG
Sbjct: 68  LMMLQGLDPDRFTFPSLFKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCG 124

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
            L+ AR+                               +FDKM    +   VV++  +I 
Sbjct: 125 CLVSARK-------------------------------VFDKM----VNKSVVSWATMIG 149

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
           +Y Q      A+++ +RME   I  ++F W  MI+G  ++    +AL LF EM   GV  
Sbjct: 150 AYAQWDLPHEAIKLFRRME---IASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKG 206

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           + VT+ S + ACT L AL +G  +H    K     DV +G +L++MY+KC  +E+A RVF
Sbjct: 207 DKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVF 266

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
             + +KDV +W ++I G    G   KA ELF +MQ S+V P+ IT+  +++     G  +
Sbjct: 267 QEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVN 326

Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
           E +  F  M     ++ +   +  ++    + G+   A  + + M  +   P+   ++ +
Sbjct: 327 EGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMA---PDYFVLVGL 383

Query: 507 LPAC 510
           L AC
Sbjct: 384 LSAC 387



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 174/393 (44%), Gaps = 49/393 (12%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLL 98
           +AI     +  QG    R T+ +L ++C     +   ++LH     L    D +++  L+
Sbjct: 61  QAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLM 117

Query: 99  SVYAKCGCLDDAREVFEDMRER--------------------------------NLYTWS 126
           ++Y+ CGCL  AR+VF+ M  +                                NL+ W+
Sbjct: 118 NMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWN 177

Query: 127 AMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL 186
            MI  +  D  + E + LF  M   G+  D      +L AC + G  E GK +H  + K 
Sbjct: 178 IMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKE 237

Query: 187 GMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF 246
            +     +  +++ +Y KCG +  A R F+ M EKD + W ++I G    G+  +A  LF
Sbjct: 238 KIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELF 297

Query: 247 DKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQ 305
            +M   E+K   +TF  ++ + +  G  +  +     M +  GI P +  + CM+    +
Sbjct: 298 HEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGR 357

Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM----GMEIHSLAVKMGFTD 361
            GR ++A DL + M      P+   +   +SAC     L +      ++  L  K G T 
Sbjct: 358 AGRIAEAEDLIQNMPMA---PDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTY 414

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
            +L      N+YS  +  EAA+++ +++ ++++
Sbjct: 415 VLLS-----NIYSSMKNWEAAKKMRELMVERNI 442



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 127/284 (44%), Gaps = 40/284 (14%)

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           + R+  N      T + NS+I GY        A+  ++ M      P+  T  S+  +C 
Sbjct: 30  YARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCG 89

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT--- 568
            L      K++H    +    S   + N+L++ Y+  G +V +R +FD M +K +++   
Sbjct: 90  VLCEG---KQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWAT 146

Query: 569 -----------------------------WNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
                                        WN +I G+V    +  AL LF++M+  G+K 
Sbjct: 147 MIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKG 206

Query: 600 NRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEF 659
           ++ T  S+++A +  G ++LGK +   I E  +I   +   +A++D+Y + G +E AM  
Sbjct: 207 DKVTMASLLIACTHLGALELGKWLHVYI-EKEKIEVDVALGTALVDMYAKCGSIESAMRV 265

Query: 660 IEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
            ++MP E D   W AL+    + G     + A+E   +++  +V
Sbjct: 266 FQEMP-EKDVMTWTALIVGLAMCGQ---GLKALELFHEMQMSEV 305



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 3/82 (3%)

Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
           SG++ Y+R +F+ + +    T NS+I GY        A+  +  M   GL P+R TF S+
Sbjct: 25  SGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSL 84

Query: 608 ILAHSLAGMVDLGKKVFCSITE 629
             +    G++  GK++ C  T+
Sbjct: 85  FKS---CGVLCEGKQLHCHSTK 103


>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 575

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 196/608 (32%), Positives = 323/608 (53%), Gaps = 56/608 (9%)

Query: 142 VELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
           V LF  M+Q   + P+   +  ++++ G+        L  + V+K G      VRN +L 
Sbjct: 16  VSLFKHMLQHCDIKPNASFYSVMMKSAGS-----ESMLFLAHVLKSGYDRDHYVRNGILG 70

Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
           +Y K G + +AR+ F+ M ++    WN MISGY++ G  +EA  LF  M  +EI   V+T
Sbjct: 71  IYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRNVIT 130

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
           +  +I  + + G    A     +M        V +W  M+SG+AQ G   + + LF +M 
Sbjct: 131 WTTMITGHAKKGNLKTARMYFDKMPER----SVVSWNAMLSGYAQGGAPEETIRLFNDML 186

Query: 321 FVG-VMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEE 378
             G V P+  T  + IS+C+ L    +   I   L  K+GF  +  V  +L++M++KC  
Sbjct: 187 SPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGN 246

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
           LEAA ++F+ +    VY +                         S VP     WN +IS 
Sbjct: 247 LEAAHKIFEQL---GVYKY------------------------RSSVP-----WNAMISA 274

Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS--CF 496
           Y + G+   A  LF +M      +R+T SWNS+IAGY Q G+   A+ +F +M SS    
Sbjct: 275 YARVGDLPSAKHLFDKM-----PQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSR 329

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            P+ VT++SV  AC +L            +    ++ S+ V NSLI+ Y++ G++  +  
Sbjct: 330 KPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVL 389

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           IF  M+++D++++N+LI G+  HG    +++L  +MK  G++P+R T+++I+ A S AG+
Sbjct: 390 IFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGL 449

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           +D G+++F SI       P ++HY+ MID+ GR+G+LEEAM+ I+ MP+EP + I+ +LL
Sbjct: 450 LDEGQRLFESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLL 504

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
            A  IH  ++L  LA  +LF +EP +     L+  IYA  G+ ++  KVR   R+   + 
Sbjct: 505 NATSIHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKK 564

Query: 737 SFGQCWIE 744
           + G  W+E
Sbjct: 565 TTGLSWLE 572



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 191/438 (43%), Gaps = 110/438 (25%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D +V+  +L +YAK G ++ AR++F++M +R +  W+ MI  Y     W+          
Sbjct: 61  DHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGY-----WK---------- 105

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR---VRNSVLAVYVKCG 206
                            CGN  + EA  L H     +G   + R      +++  + K G
Sbjct: 106 -----------------CGN--EEEASTLFHV----MGDQEISRNVITWTTMITGHAKKG 142

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCRE-EIKLGVVTFNILI 265
            L  AR +F+ M E+  V+WN+M+SGY Q G  +E  RLF+ M     ++    T+  +I
Sbjct: 143 NLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVI 202

Query: 266 RSYNQLGQCDVAMEMVKRM-ESLGITPDVFT----------------------------- 295
            S + LG   ++  +V+++ + +G  P+ F                              
Sbjct: 203 SSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKY 262

Query: 296 -----WTCMISGFA-------------------------------QNGRTSQALDLFKEM 319
                W  MIS +A                               QNG + +A+ LF+EM
Sbjct: 263 RSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEM 322

Query: 320 --SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE 377
             S     P+ VT+ S  SAC  L  L +G    S+         + V NSLINMYS+C 
Sbjct: 323 ISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCG 382

Query: 378 ELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS 437
            ++ A  +F  +  +D+ S+N++I+G+ + G+  ++ EL  KM+E  + P+ IT+  +++
Sbjct: 383 SMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILT 442

Query: 438 GYIQNGNEDEAVDLFQRM 455
                G  DE   LF+ +
Sbjct: 443 ACSHAGLLDEGQRLFESI 460



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 73/146 (50%), Gaps = 3/146 (2%)

Query: 35  NGRLNEAITVLDSI--ATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDV 91
           NG   +AI + + +  +    K    T +++  AC     + L     + L +   +I +
Sbjct: 309 NGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISI 368

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            V   L+++Y++CG + DA  +F++M  R+L +++ +I  ++      E +EL   M +D
Sbjct: 369 SVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLSKMKED 428

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGK 177
           G+ PD   +  IL AC + G  + G+
Sbjct: 429 GIEPDRITYIAILTACSHAGLLDEGQ 454


>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 688

 Score =  314 bits (805), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 193/699 (27%), Positives = 345/699 (49%), Gaps = 96/699 (13%)

Query: 59  TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
           TY ++L +C    S  L ++LHA  +        FV TKLL +YA+    ++A  VF+ M
Sbjct: 53  TYASILDSC---GSPILGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVFDTM 109

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP--DDFLFPKILQACGNCGDFEA 175
             RNL++W+A++  Y     + E   LF  ++ +G+    D F+FP +L+ C      E 
Sbjct: 110 PLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFPVVLKICCGLCAVEL 169

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G+ MH + +K                    G +  A   F     K   ++N+MI+GY++
Sbjct: 170 GRQMHGMALK------------------HDGDMKSAFEMFSRFSRKSAASYNAMIAGYWE 211

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFT 295
            G   +A  LFD+M +E ++   +++N +I  Y      D A  + + +   GI PD F 
Sbjct: 212 NGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSF- 270

Query: 296 WTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
                                             T+ S ++ C D+ ++  G E HSLA+
Sbjct: 271 ----------------------------------TLGSVLAGCADMASIRRGKEAHSLAI 296

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
             G   + +VG +L+ MYSKC+++ AA+  FD + ++D+ +WN++I+GY +     K  E
Sbjct: 297 VRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRE 356

Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
           L  KM+     PNV TWN +I+GY++N   D A+ LF                       
Sbjct: 357 LHQKMRRDGFEPNVYTWNGIIAGYVENKQYDSAMQLFT---------------------- 394

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
                         +MQ +   P+  T+  +L AC+ L    + K++H   +R   +S +
Sbjct: 395 --------------EMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDV 440

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            +  +L+D YAK G++ +   +++ +S+ ++++ N+++  Y +HG     + LF +M + 
Sbjct: 441 HIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLAS 500

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
            ++P+  TFL+++ +   AG +++G +   ++   Y ++P ++HY+ M+DL  R+G+L E
Sbjct: 501 KVRPDHVTFLAVLSSCVHAGSLEIGHECL-ALMVAYNVMPSLKHYTCMVDLLSRAGQLYE 559

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A E I+++P E D+  W ALL  C IH  +DL  +A E+L +LEP +     ++  +YA 
Sbjct: 560 AYELIKNLPTEADAVTWNALLGGCFIHNEVDLGEIAAEKLIELEPNNPGNYVMLANLYAS 619

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
            GK     + R+L ++   +   G  WIE ++ ++ FV 
Sbjct: 620 AGKWHYLTQTRQLMKDMGMQKRPGCSWIEDRDGIHVFVA 658



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/475 (24%), Positives = 222/475 (46%), Gaps = 86/475 (18%)

Query: 51  QGAKVRRNTYI--NLLQACIDSNSIHLARKLHAFL-----NLVTEIDVFVK--------- 94
           +G +VR + ++   +L+ C    ++ L R++H        ++ +  ++F +         
Sbjct: 143 EGVRVRLDFFVFPVVLKICCGLCAVELGRQMHGMALKHDGDMKSAFEMFSRFSRKSAASY 202

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRE----RNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
             +++ Y + G L  A+E+F+ M +    ++  +W++MI  Y     + E   LF  +++
Sbjct: 203 NAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLK 262

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           +G+ PD F    +L  C +      GK  HSL I  G+     V  +++ +Y KC  ++ 
Sbjct: 263 EGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVA 322

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           A+  F+ + E+D   WN++ISG                                   Y +
Sbjct: 323 AQMAFDGVSERDLPTWNALISG-----------------------------------YAR 347

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
             Q +   E+ ++M   G  P+V+TW  +I+G+ +N +   A+ LF EM    + P+  T
Sbjct: 348 CNQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYT 407

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
           +   ++AC+ L  +  G ++H+ +++ G   DV +G +L++MY+KC +++   RV++MI 
Sbjct: 408 VGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMIS 467

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-----GYIQNGNE 445
           + ++ S N+M+  Y   G+  +   LF +M  S V P+ +T+  ++S     G ++ G+E
Sbjct: 468 NPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHE 527

Query: 446 DEA-----------------VDLFQRMG---------KNDKVKRNTASWNSLIAG 474
             A                 VDL  R G         KN   + +  +WN+L+ G
Sbjct: 528 CLALMVAYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKNLPTEADAVTWNALLGG 582


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 216/765 (28%), Positives = 359/765 (46%), Gaps = 121/765 (15%)

Query: 179 MHSLVIK-LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
           +H+L+++ L       + N++L  Y   G L  ARR F++M  ++ V  NS++S   + G
Sbjct: 32  VHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAG 91

Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
              +  RLF  + +                                        D  ++ 
Sbjct: 92  LVRDMERLFTSLPQR---------------------------------------DAVSYN 112

Query: 298 CMISGFAQNGRTSQALDLFKEM--SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
            +++GF++ G  ++A   +  +     GV P+ +T++  +   + L   A+G ++H   +
Sbjct: 113 ALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQIL 172

Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFD---------------------------- 387
           ++GF      G+ L++MY+K   +  A RVFD                            
Sbjct: 173 RLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARA 232

Query: 388 ---MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV------------------- 425
               I+++D  +W +M+ G  Q G   +A ++F +M+   V                   
Sbjct: 233 LFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAA 292

Query: 426 ----------------PPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
                             NV   + L+  Y +  +   A  +F+RM     + +N  SW 
Sbjct: 293 LEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRM-----MWKNIISWT 347

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
           ++I GY Q G    A+ VF +MQ     P+  T+ SV+ +CA L +  +  + H   L  
Sbjct: 348 AMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVS 407

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
            L   + V N+L+  Y K G+I  +  +FD MS  D ++W +L+ GY   G     +DLF
Sbjct: 408 GLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLF 467

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR 649
           ++M S G+KP+  TF+ ++ A S +G+VD G+  F S+ + + I+P+ +HY+ MIDLY R
Sbjct: 468 EKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSR 527

Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLI 709
           SG L++A EFI+ MP  PD+  W  LL+ACR+ G++++   A E L  L+P +     L+
Sbjct: 528 SGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLL 587

Query: 710 LQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLY--- 766
             ++A  G+  D  K+R+  R+   +   G  WI+ KN V+ F     S  +S  +Y   
Sbjct: 588 CSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKL 647

Query: 767 SWLQN--VPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALI-GSSQAPHTIRIVK 823
            WL +  V E      S     + + EK  +   HSEKLA+AF LI    + P  IRIVK
Sbjct: 648 QWLNSKMVEEGYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMP--IRIVK 705

Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           N+R+CV CH   K++S +   +I + D+   H F NG CSCGD+W
Sbjct: 706 NLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 138/566 (24%), Positives = 240/566 (42%), Gaps = 94/566 (16%)

Query: 59  TYI--NLLQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREV 113
           TY+   LL A   S  +  AR++   +   NLVT         LLS  A+ G + D   +
Sbjct: 46  TYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVT------GNSLLSALARAGLVRDMERL 99

Query: 114 FEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD--GLFPDDFLFPKILQACGNCG 171
           F  + +R+  +++A++  +SR          +  +++D  G+ P       ++      G
Sbjct: 100 FTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALG 159

Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
           D   G+ +H  +++LG        + ++ +Y K G +  ARR F+ M+ K+ V  N+MI+
Sbjct: 160 DRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMIT 219

Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
           G  +     EA  LF+ +   +     +T+  ++    Q G    A+++ +RM + G+  
Sbjct: 220 GLLRCKMVAEARALFEAIEERD----SITWTTMVTGLTQNGLESEALDVFRRMRAEGVGI 275

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
           D +T+                                    S ++AC  L AL  G +IH
Sbjct: 276 DQYTF-----------------------------------GSILTACGALAALEEGKQIH 300

Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
           +   +  + D+V VG++L++MYSKC  +  AE VF  +  K++ SW +MI GY Q G   
Sbjct: 301 AYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGE 360

Query: 412 KAYELFIKMQESDVPPN-----------------------------------VITWNVLI 436
           +A  +F +MQ   + P+                                   V   N L+
Sbjct: 361 EAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALV 420

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
           + Y + G+ ++A  LF  M  +D+V     SW +L+ GY Q G+    + +F KM S   
Sbjct: 421 TLYGKCGSIEDAHRLFDEMSFHDQV-----SWTALVMGYAQFGKAKETIDLFEKMLSKGV 475

Query: 497 YPNCVTILSVLPACAYLVASNKVKE-IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
            P+ VT + VL AC+     +K +   H       +         +ID Y++SG +  + 
Sbjct: 476 KPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAE 535

Query: 556 TIFDGMSS-KDIITWNSLICGYVLHG 580
                M    D   W +L+    L G
Sbjct: 536 EFIKQMPRCPDAFGWATLLSACRLRG 561



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 160/314 (50%), Gaps = 5/314 (1%)

Query: 27  THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV 86
           T +  L  NG  +EA+ V   +  +G  + + T+ ++L AC    ++   +++HA++   
Sbjct: 247 TMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRT 306

Query: 87  T-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF 145
             E +VFV + L+ +Y+KC  +  A  VF  M  +N+ +W+AMI  Y ++    E V +F
Sbjct: 307 CYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVF 366

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M +DG+ PDDF    ++ +C N    E G   H L +  G+     V N+++ +Y KC
Sbjct: 367 SEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKC 426

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G +  A R F+ M   D V+W +++ GY Q G+  E   LF+KM  + +K   VTF  ++
Sbjct: 427 GSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVL 486

Query: 266 RSYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
            + ++ G  D        M+    I P    +TCMI  ++++G   QA +  K+M     
Sbjct: 487 SACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRC-- 544

Query: 325 MPNGVTITSAISAC 338
            P+     + +SAC
Sbjct: 545 -PDAFGWATLLSAC 557



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 181/408 (44%), Gaps = 52/408 (12%)

Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
           +C  + +AR +FE + ER+  TW+ M+   +++    E +++F  M  +G+  D + F  
Sbjct: 223 RCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGS 282

Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
           IL ACG     E GK +H+ + +        V ++++ +Y KC  +  A   F  M  K+
Sbjct: 283 ILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKN 342

Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIK-----LG-------------------- 257
            ++W +MI GY Q G  +EA R+F +M R+ IK     LG                    
Sbjct: 343 IISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHC 402

Query: 258 ----------VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
                     V   N L+  Y + G  + A  +   M       D  +WT ++ G+AQ G
Sbjct: 403 LALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMS----FHDQVSWTALVMGYAQFG 458

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFT--DDVL 364
           +  + +DLF++M   GV P+GVT    +SAC+    +  G    HS+         DD  
Sbjct: 459 KAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHY 518

Query: 365 VGNSLINMYSKCEELEAAER-VFDMIKDKDVYSWNSMIAGYCQAG--YCGK-AYELFIKM 420
               +I++YS+   L+ AE  +  M +  D + W ++++     G    GK A E  +K+
Sbjct: 519 --TCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKL 576

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
                P N  ++ +L S +   G  ++   L + M      K    SW
Sbjct: 577 D----PQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSW 620


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 199/673 (29%), Positives = 338/673 (50%), Gaps = 51/673 (7%)

Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
           ++G   E  R+   + R  +   V   N L+  Y + G    ++E  + +       +VF
Sbjct: 46  RLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCG----SLEEARLVFEATPAKNVF 101

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT-DLKALAMGMEIHSL 353
           +WT +I+  AQ+GR+ +AL LF EM   G+ P+ V+ T+AI+AC+   + L  G  +H+L
Sbjct: 102 SWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHAL 161

Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
             + GF D V+   SL++MYSKC  LE + + F+ + + +  SWN+MIA + +     +A
Sbjct: 162 LRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEA 221

Query: 414 YELFIKMQESDVPPNVITWNVLISGY----------------IQNGNEDEAVD------- 450
                KM    +    +T+  L+S Y                ++ G + + V+       
Sbjct: 222 LRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQDVVNVILNMYG 281

Query: 451 ----------LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
                     +F+ M + D +     +WN++IA Y Q G  + AL  +  MQ     P+ 
Sbjct: 282 KCGCLQDAEAMFKSMSQPDVI-----AWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDD 336

Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
            T +SV+ ACA L      K++H  +  R+ + +  + NSL++ Y K G +  +R+IFD 
Sbjct: 337 YTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVT-ELANSLVNMYGKCGILDVARSIFD- 394

Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
            ++K  +TWN++I  Y  H     A +LF  M+  G +P+  TF+S++ A + AG+ +  
Sbjct: 395 KTAKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEA 454

Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
              F  + + + + P   HY  M++  G++G+L +A   I+ MP EPD   W + L  CR
Sbjct: 455 HSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCR 514

Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
            HG++     A +    ++P        + +I+A  G  ++A ++RKL  +   R + G+
Sbjct: 515 SHGDMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGIRKNAGR 574

Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS-----SHSGLCIEEEEKEEI 795
             I++   VY F  G  S   S  ++  L+ + + +         +H    +E  +KE +
Sbjct: 575 SIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKRAGYDPDMTHVAHDVEAGQKEPL 634

Query: 796 SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
              HSE+LA+AF +I +SQ    +RI+KN+R+C  CH   K  S +   EI + DS   H
Sbjct: 635 LFAHSERLAIAFGIISTSQGT-PLRIMKNLRVCGDCHAMTKLTSKITRREIIVRDSNRFH 693

Query: 856 HFKNGQCSCGDYW 868
           HFKNG CSC D+W
Sbjct: 694 HFKNGSCSCKDFW 706



 Score =  219 bits (558), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 236/482 (48%), Gaps = 38/482 (7%)

Query: 61  INLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
           + ++Q+C    ++   R++H  +  V    DV+V   L+ +Y KCG L++AR VFE    
Sbjct: 38  VRVIQSCARLGALAEGRRIHQLIRRVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPA 97

Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKL 178
           +N+++W+ +I   ++  R +E + LF+ M++ G+ P    F   + AC    +F  AG+ 
Sbjct: 98  KNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRA 157

Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
           +H+L+ + G         S++++Y KCG L  + + FESM E + V+WN+MI+ + +   
Sbjct: 158 LHALLRRYGFQDAVVATTSLVSMYSKCGSLEESVKTFESMTELNAVSWNAMIAAFAEHRR 217

Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ---------------------------- 270
             EA R   KM  E I+   VT+  L+ +Y+Q                            
Sbjct: 218 GLEALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCILRTGFDQDVVNVIL 277

Query: 271 --LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
              G+C    +     +S+   PDV  W  MI+ ++Q+G TS+AL  ++ M   GV+P+ 
Sbjct: 278 NMYGKCGCLQDAEAMFKSMS-QPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDD 336

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            T  S I AC  L  + +G ++H       F    L  NSL+NMY KC  L+ A  +FD 
Sbjct: 337 YTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTELA-NSLVNMYGKCGILDVARSIFDK 395

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
                V +WN+MI  Y Q  +  +A+ELF+ M+     P+ IT+  ++S     G  +EA
Sbjct: 396 TAKGSV-TWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEA 454

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
              F  M ++  V+     +  ++    + G+ ++A  + + M    F P+ +T  S L 
Sbjct: 455 HSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMP---FEPDVLTWTSFLA 511

Query: 509 AC 510
            C
Sbjct: 512 NC 513



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 171/359 (47%), Gaps = 14/359 (3%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLS 99
           EA+  L  +  +G +    TYI L+ A    + +  AR +H  + L T  D  V   +L+
Sbjct: 220 EALRTLQKMFLEGIRACSVTYITLMSAYDQPSQLKSARYIHDCI-LRTGFDQDVVNVILN 278

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +Y KCGCL DA  +F+ M + ++  W+ MI AYS+     E +  + LM ++G+ PDD+ 
Sbjct: 279 MYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEEGVVPDDYT 338

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSC--VRRVRNSVLAVYVKCGKLIWARRFFES 217
           +  ++ AC   GD E GK +H    +LG     V  + NS++ +Y KCG L  AR  F+ 
Sbjct: 339 YVSVIDACATLGDMEVGKQVHR---RLGDRAFQVTELANSLVNMYGKCGILDVARSIFDK 395

Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
              K  V WN+MI  Y Q     +A  LF  M  +  +   +TF  ++ +    G  + A
Sbjct: 396 T-AKGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGLPEEA 454

Query: 278 ME-MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
               V   +  G+ P    + CM+    + GR S A  L + M F    P+ +T TS ++
Sbjct: 455 HSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPF---EPDVLTWTSFLA 511

Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGN-SLINMYSKCEELEAAERVFDMIKDKDV 394
            C     +  G      A+++    +   G  +L  +++   + + A R+  ++ D+ +
Sbjct: 512 NCRSHGDMKRGKFAAKGAIRI--DPEASTGYVALARIHADAGDFQEASRIRKLMLDRGI 568



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 132/329 (40%), Gaps = 40/329 (12%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN----LVTEID 90
           +G  +EA+   + +  +G      TY++++ AC     + + +++H  L      VTE+ 
Sbjct: 314 HGHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTEL- 372

Query: 91  VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
                 L+++Y KCG LD AR +F D   +   TW+AMIGAY++    ++  ELF LM  
Sbjct: 373 ---ANSLVNMYGKCGILDVARSIF-DKTAKGSVTWNAMIGAYAQHSHEQQAFELFLLMRL 428

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV----KCG 206
           DG  P    F  +L AC N G  E     HS  + +      R         V    K G
Sbjct: 429 DGEEPSYITFMSVLSACANAGLPEEA---HSYFVCMQQDHGVRPGGGHYGCMVESLGKAG 485

Query: 207 KLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCR--EEIKLGVVTFNI 263
           +L  A    + M  E D + W S ++     G+            R   E   G V    
Sbjct: 486 RLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKRGKFAAKGAIRIDPEASTGYVA--- 542

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPD-----------VFTWTCMISGFAQNGRTSQA 312
           L R +   G    A  + K M   GI  +           V+ +T   +G   N R+ + 
Sbjct: 543 LARIHADAGDFQEASRIRKLMLDRGIRKNAGRSIIKLGTSVYEFT---AGDQSNPRSKEI 599

Query: 313 LD----LFKEMSFVGVMPNGVTITSAISA 337
            D    L KEM   G  P+   +   + A
Sbjct: 600 FDELKRLDKEMKRAGYDPDMTHVAHDVEA 628


>gi|225463207|ref|XP_002267970.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Vitis vinifera]
          Length = 868

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 217/837 (25%), Positives = 389/837 (46%), Gaps = 124/837 (14%)

Query: 52  GAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTK-LLSVYAKCGCLDDA 110
           G K        LL++C+  ++I     LH +   +  +      K LL++YAK G LD  
Sbjct: 34  GYKPNGQILAALLKSCVAISAIRFGSVLHGYALKLGHVSCQSLCKGLLNLYAKSGALDYC 93

Query: 111 REVFEDMRERNLYTWSAMIGAYSRDQRWR-EVVELFFLM-VQDGLFPDDFLFPKILQACG 168
            ++F +M +R+   W+ ++   +  Q    EV+ LF  M + +   P+      +L  C 
Sbjct: 94  NKLFGEMDQRDPVIWNIVLSGLAGFQSHEAEVMRLFRAMHMVNEAKPNSVTIAIVLPVCA 153

Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW-ARRFFESMDEKDGVAWN 227
              + +AGK +HS VIK G+       N+++++Y KCG +   A   F  ++ KD V+WN
Sbjct: 154 RLRE-DAGKSVHSYVIKSGLESHTLAGNALISMYAKCGLVCSDAYAAFNRIEFKDVVSWN 212

Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVT--------------------------- 260
           ++I+G+ +    +EA +LF  M +  I+    T                           
Sbjct: 213 AVIAGFSENKFTEEAFKLFHAMLKGPIQPNYATIASILPVCASLEENAGYRYGKEVHCHV 272

Query: 261 ------------FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR 308
                        N L+  Y ++GQ + A  + + M+S     D+ +W  +I+G+A NG 
Sbjct: 273 LRRMELVEDVSVINSLMSFYLRIGQMEKAEFLFRNMKS----RDLVSWNAIIAGYASNGE 328

Query: 309 TSQALDLFKE-MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM-GFTDDVLVG 366
             +AL+LF E +S   + P+ VT+ S + AC  +  L +   IH   ++  G  +D  VG
Sbjct: 329 WLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDTSVG 388

Query: 367 NSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           N+L++ Y+KC   +AA + F MI  KD+ SWN+++  + ++G       L   M    + 
Sbjct: 389 NALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLREGIR 448

Query: 427 PNVIT--------------------------------------WNVLISGYIQNGNEDEA 448
           P+ IT                                       N ++  Y + GN   A
Sbjct: 449 PDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNMKYA 508

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNN------------------------- 483
           V++F  + +    KRN  + NS+I+GY      ++                         
Sbjct: 509 VNIFGSLSE----KRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDLTTWNLMVRVYAE 564

Query: 484 ------ALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPV 537
                 AL +F ++Q     P+ VTI+S+LPACA++ + + +++ HG V+R    + + +
Sbjct: 565 NDFPDQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACF-NDVRL 623

Query: 538 MNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGL 597
             + ID Y+K G++  +  +F     KD++ + +++ G+ +HG    AL +F  M   G+
Sbjct: 624 NGAFIDMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGV 683

Query: 598 KPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAM 657
           KP+     +++ A S AG+VD G K+F SI + +   P +E Y+ ++DL  R G++++A 
Sbjct: 684 KPDHVIITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAY 743

Query: 658 EFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICG 717
            F+  MPIE +++IW  LL ACR H  ++L  +  + LF +E  ++    ++  +YA   
Sbjct: 744 TFVTRMPIEANANIWGTLLGACRTHHEVELGRVVADHLFKIESDNIGNYVVMSNLYAADA 803

Query: 718 KPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPE 774
           + +  +++R+L R    +   G  WIEV      F+ G  S     ++Y  L  + +
Sbjct: 804 RWDGVMEIRRLMRTRELKKPAGCSWIEVGRRKNVFIAGDSSHPQRSIIYRTLSTLDQ 860



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 176/702 (25%), Positives = 298/702 (42%), Gaps = 136/702 (19%)

Query: 131 AYSRDQRW---REVVELFFLMVQ--DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIK 185
           A+   +RW    E + LF   V+   G  P+  +   +L++C        G ++H   +K
Sbjct: 8   AFCASERWLRHDEALSLFLERVRCSVGYKPNGQILAALLKSCVAISAIRFGSVLHGYALK 67

Query: 186 LGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY--FQIGENDEAH 243
           LG    + +   +L +Y K G L +  + F  MD++D V WN ++SG   FQ  E  E  
Sbjct: 68  LGHVSCQSLCKGLLNLYAKSGALDYCNKLFGEMDQRDPVIWNIVLSGLAGFQSHE-AEVM 126

Query: 244 RLFDKM----------------------CREE---------IKLGV----VTFNILIRSY 268
           RLF  M                       RE+         IK G+    +  N LI  Y
Sbjct: 127 RLFRAMHMVNEAKPNSVTIAIVLPVCARLREDAGKSVHSYVIKSGLESHTLAGNALISMY 186

Query: 269 NQLG-QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
            + G  C  A     R+E      DV +W  +I+GF++N  T +A  LF  M    + PN
Sbjct: 187 AKCGLVCSDAYAAFNRIE----FKDVVSWNAVIAGFSENKFTEEAFKLFHAMLKGPIQPN 242

Query: 328 GVTITSAISACTDLKALA---MGMEIHSLAV-KMGFTDDVLVGNSLINMYSKCEELEAAE 383
             TI S +  C  L+  A    G E+H   + +M   +DV V NSL++ Y +  ++E AE
Sbjct: 243 YATIASILPVCASLEENAGYRYGKEVHCHVLRRMELVEDVSVINSLMSFYLRIGQMEKAE 302

Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK-MQESDVPPNVITW---------- 432
            +F  +K +D+ SWN++IAGY   G   KA ELF + +    + P+ +T           
Sbjct: 303 FLFRNMKSRDLVSWNAIIAGYASNGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHV 362

Query: 433 --------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                     N L+S Y +      A+  F  + + D +     
Sbjct: 363 HNLQVAKGIHGYIIRHPGLREDTSVGNALLSFYAKCNYTQAALQTFLMISRKDLI----- 417

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           SWN+++  + + G + + + +   M      P+ +TIL+++   A +    KVKE H   
Sbjct: 418 SWNAILDAFTESGCETHLVNLLHWMLREGIRPDSITILTIIQYYAAVSRVKKVKETHSYS 477

Query: 527 LRRSL---ESSLPVMNSLIDTYAKSGNIVY------------------------------ 553
           +R  L   ++   + N ++D YAK GN+ Y                              
Sbjct: 478 IRFGLLQGDAGPTLGNGMLDAYAKCGNMKYAVNIFGSLSEKRNVVTCNSMISGYVNSSSH 537

Query: 554 --SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
             +  IF+ MS  D+ TWN ++  Y  + F   AL LF +++  G+KP+  T +SI+ A 
Sbjct: 538 DDAYAIFNTMSETDLTTWNLMVRVYAENDFPDQALSLFHELQGQGMKPDIVTIMSILPAC 597

Query: 612 SLAGMVDLGKKVFC-SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSS 670
           +    V + ++     I  C+  + +     A ID+Y + G +  A +     P + D  
Sbjct: 598 AHMASVHMLRQCHGYVIRACFNDVRL---NGAFIDMYSKCGSVFGAYKLFLSSP-QKDLV 653

Query: 671 IWEALLTACRIHGNIDLAVLAIERLFDL--EPGDVLIQRLIL 710
           ++ A++    +HG  + A+     + +L  +P  V+I  ++ 
Sbjct: 654 MFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLF 695



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 192/430 (44%), Gaps = 47/430 (10%)

Query: 35  NGRLNEAITVLDS-IATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--NLVTEIDV 91
           NG   +A+ +    I+ +  K    T +++L AC   +++ +A+ +H ++  +     D 
Sbjct: 326 NGEWLKALELFSEFISLETIKPDSVTLVSVLPACAHVHNLQVAKGIHGYIIRHPGLREDT 385

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
            V   LLS YAKC     A + F  +  ++L +W+A++ A++       +V L   M+++
Sbjct: 386 SVGNALLSFYAKCNYTQAALQTFLMISRKDLISWNAILDAFTESGCETHLVNLLHWMLRE 445

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM---SCVRRVRNSVLAVYVKCGKL 208
           G+ PD      I+Q        +  K  HS  I+ G+        + N +L  Y KCG +
Sbjct: 446 GIRPDSITILTIIQYYAAVSRVKKVKETHSYSIRFGLLQGDAGPTLGNGMLDAYAKCGNM 505

Query: 209 IWARRFFESMDEKDGVAW-NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
            +A   F S+ EK  V   NSMISGY     +D+A+ +F+ M   ++     T+N+++R 
Sbjct: 506 KYAVNIFGSLSEKRNVVTCNSMISGYVNSSSHDDAYAIFNTMSETDL----TTWNLMVRV 561

Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           Y +    D A+ +   ++  G+ PD+                                  
Sbjct: 562 YAENDFPDQALSLFHELQGQGMKPDI---------------------------------- 587

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            VTI S + AC  + ++ M  + H   ++  F +DV +  + I+MYSKC  +  A ++F 
Sbjct: 588 -VTIMSILPACAHMASVHMLRQCHGYVIRACF-NDVRLNGAFIDMYSKCGSVFGAYKLFL 645

Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDE 447
               KD+  + +M+ G+   G   +A  +F  M E  V P+ +    ++      G  DE
Sbjct: 646 SSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHVIITAVLFACSHAGLVDE 705

Query: 448 AVDLFQRMGK 457
              +F  + K
Sbjct: 706 GWKIFNSIEK 715



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 95/196 (48%), Gaps = 2/196 (1%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLL 98
           ++A+++   +  QG K    T +++L AC    S+H+ R+ H ++      DV +    +
Sbjct: 569 DQALSLFHELQGQGMKPDIVTIMSILPACAHMASVHMLRQCHGYVIRACFNDVRLNGAFI 628

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +Y+KCG +  A ++F    +++L  ++AM+G ++      E + +F  M++ G+ PD  
Sbjct: 629 DMYSKCGSVFGAYKLFLSSPQKDLVMFTAMVGGFAMHGMGEEALRIFSYMLELGVKPDHV 688

Query: 159 LFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
           +   +L AC + G  + G K+ +S+    G          V+ +  + G++  A  F   
Sbjct: 689 IITAVLFACSHAGLVDEGWKIFNSIEKVHGFQPTMEQYACVVDLLARGGRIKDAYTFVTR 748

Query: 218 MD-EKDGVAWNSMISG 232
           M  E +   W +++  
Sbjct: 749 MPIEANANIWGTLLGA 764


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  314 bits (804), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 185/561 (32%), Positives = 297/561 (52%), Gaps = 37/561 (6%)

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           +  CT  K L  G  +H+  ++  F  D+++GN+L+NMY+KC  LE A +VF+ +  +D 
Sbjct: 67  LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDF 126

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS----------------- 437
            +W ++I+GY Q      A   F +M      PN  T + +I                  
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGF 186

Query: 438 ----GYIQNGNEDEAV-DLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNA 484
               G+  N +   A+ DL+ R G  D  +        RN  SWN+LIAG+ +      A
Sbjct: 187 CVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKA 246

Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
           L +F+ M    F P+  +  S+  AC+      + K +H  +++   +      N+L+D 
Sbjct: 247 LELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 306

Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
           YAKSG+I  +R IFD ++ +D+++WNSL+  Y  HGF   A+  F++M+  G++PN  +F
Sbjct: 307 YAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366

Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
           LS++ A S +G++D G   +  + +   I+P   HY  ++DL GR+G L  A+ FIE+MP
Sbjct: 367 LSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425

Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
           IEP ++IW+ALL ACR+H N +L   A E +F+L+P D     ++  IYA  G+  DA +
Sbjct: 426 IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAAR 485

Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY-SDLLYSW---LQNVPE-NVTAR 779
           VRK  +E+  +      W+E++N ++ FV          ++   W   L  + E      
Sbjct: 486 VRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPD 545

Query: 780 SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVS 839
           +SH  + ++++E+E     HSEK+ALAFAL+ +     TI I KNIR+C  CH   K  S
Sbjct: 546 TSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGS-TIHIKKNIRVCGDCHTAIKLAS 604

Query: 840 MMHHCEIFLADSKCLHHFKNG 860
            +   EI + D+   HHFK+ 
Sbjct: 605 KVVGREIIVRDTNRFHHFKDA 625



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 208/452 (46%), Gaps = 48/452 (10%)

Query: 57  RNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           R  Y  LL+ C     +   R +HA  L  +   D+ +   LL++YAKCG L++AR+VFE
Sbjct: 60  RRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFE 119

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
            M +R+  TW+ +I  YS+  R  + +  F  M++ G  P++F    +++A         
Sbjct: 120 KMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +H   +K G      V +++L +Y + G +  A+  F++++ ++ V+WN++I+G+ +
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239

Query: 236 IGENDEAHRLFDKMCREE-------------------------------IKLG--VVTF- 261
               ++A  LF  M R+                                IK G  +V F 
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299

Query: 262 -NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
            N L+  Y + G    A ++  R+       DV +W  +++ +AQ+G   +A+  F+EM 
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
            VG+ PN ++  S ++AC+    L  G   + L  K G   +     +++++  +  +L 
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415

Query: 381 AAER-VFDMIKDKDVYSWNSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
            A R + +M  +     W +++     +        A E   ++   D  P+VI +N+  
Sbjct: 416 RALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYA 475

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           SG    G  ++A  + ++M ++   K    SW
Sbjct: 476 SG----GRWNDAARVRKKMKESGVKKEPACSW 503



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 159/336 (47%), Gaps = 55/336 (16%)

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           RRF+ ++ +K  V +  +I G         AH +   + R +I +G    N L+  Y + 
Sbjct: 60  RRFYNTLLKKCTV-FKLLIQGRIV-----HAH-ILQSIFRHDIVMG----NTLLNMYAKC 108

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
           G  + A ++ ++M       D  TWT +ISG++Q+ R   AL  F +M   G  PN  T+
Sbjct: 109 GSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTL 164

Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
           +S I A    +    G ++H   VK GF  +V VG++L+++Y++   ++ A+ VFD ++ 
Sbjct: 165 SSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES 224

Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------------- 432
           ++  SWN++IAG+ +     KA ELF  M      P+  ++                   
Sbjct: 225 RNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWV 284

Query: 433 ----------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
                           N L+  Y ++G+  +A  +F R+ K D V     SWNSL+  Y 
Sbjct: 285 HAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV-----SWNSLLTAYA 339

Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
           Q G    A+  F +M+     PN ++ LSVL AC++
Sbjct: 340 QHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSH 375



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 173/390 (44%), Gaps = 43/390 (11%)

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
           D   +  +L+ C        G+++H+ +++        + N++L +Y KCG L  AR+ F
Sbjct: 59  DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-------- 267
           E M ++D V W ++ISGY Q     +A   F++M R        T + +I++        
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178

Query: 268 ---------------------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
                                      Y + G  D A  +   +ES     DV +W  +I
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRN---DV-SWNALI 234

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           +G A+   T +AL+LF+ M   G  P+  +  S   AC+    L  G  +H+  +K G  
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294

Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
                GN+L++MY+K   +  A ++FD +  +DV SWNS++  Y Q G+  +A   F +M
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354

Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
           +   + PN I++  +++    +G  DE    ++ M K D +      + +++    + G 
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGD 413

Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            N AL    +M      P      ++L AC
Sbjct: 414 LNRALRFIEEMP---IEPTAAIWKALLNAC 440


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 218/649 (33%), Positives = 321/649 (49%), Gaps = 51/649 (7%)

Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
           N L+  Y++L   + A  ++    SL     V TWT +ISG   N R + AL  F  M  
Sbjct: 47  NHLVNMYSKLDLPNSAQLVL----SLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRR 102

Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
             V+PN  T      A   L     G ++H+LA+K G   DV VG S  +MYSK      
Sbjct: 103 ECVLPNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPE 162

Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT---------- 431
           A  +FD +  +++ +WN+ ++   Q G C  A   F K    D  PN IT          
Sbjct: 163 ARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACAD 222

Query: 432 -------------------------WNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
                                    +N LI  Y + G+   +  +F R+G     +RN  
Sbjct: 223 IVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSG---RRNVV 279

Query: 467 SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV 526
           SW SL+A   Q  ++  A  VF + +     P    I SVL ACA L      + +H   
Sbjct: 280 SWCSLLAALVQNHEEERACMVFLQARKE-VEPTDFMISSVLSACAELGGLELGRSVHALA 338

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
           L+  +E ++ V ++L+D Y K G+I Y+  +F  M  ++++TWN++I GY   G    AL
Sbjct: 339 LKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMAL 398

Query: 587 DLFDQMK--SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMI 644
            LF +M   S G+  +  T +S++ A S AG V+ G ++F S+   Y I P  EHY+ ++
Sbjct: 399 SLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVV 458

Query: 645 DLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVL 704
           DL GRSG ++ A EFI+ MPI P  S+W ALL AC++HG   L  +A E+LF+L+P D  
Sbjct: 459 DLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDSG 518

Query: 705 IQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTF-VTGGWSESYSD 763
              +   + A  G+ E+A  VRK  R+   + + G  W+ VKN V+ F     + E  S+
Sbjct: 519 NHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNSE 578

Query: 764 LLYSWLQNVPENVTA----RSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTI 819
           +     +   E   A     ++ S   +EEEEK      HSEK+ALAF LI   +    I
Sbjct: 579 IQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIALAFGLITLPRGV-PI 637

Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           RI KN+R+C+ CH   K++S +   EI + D+   H FK+G CSC DYW
Sbjct: 638 RITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCKDYW 686



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 198/437 (45%), Gaps = 42/437 (9%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLV--TEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
           N   + L++ + S S  L R +HA +     T +  F+   L+++Y+K    + A+ V  
Sbjct: 8   NLLGSFLESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLS 67

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
               R + TW+++I     ++R+   +  F  M ++ + P+DF FP + +A  +      
Sbjct: 68  LTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVT 127

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           GK +H+L +K G      V  S   +Y K G    AR  F+ M  ++   WN+ +S   Q
Sbjct: 128 GKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQ 187

Query: 236 IGENDEAHRLFDK-----------------------------------MCREEIKLGVVT 260
            G   +A   F K                                   + R   +  V  
Sbjct: 188 DGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSV 247

Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
           FN LI  Y + G   V+ E+V      G   +V +W  +++   QN    +A  +F + +
Sbjct: 248 FNGLIDFYGKCGDI-VSSELVFSRIGSG-RRNVVSWCSLLAALVQNHEEERACMVFLQ-A 304

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
              V P    I+S +SAC +L  L +G  +H+LA+K    +++ VG++L+++Y KC  +E
Sbjct: 305 RKEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIE 364

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD--VPPNVITWNVLISG 438
            AE+VF  + ++++ +WN+MI GY   G    A  LF +M      +  + +T   ++S 
Sbjct: 365 YAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSA 424

Query: 439 YIQNGNEDEAVDLFQRM 455
             + G  +  + +F+ M
Sbjct: 425 CSRAGAVERGLQIFESM 441



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 173/379 (45%), Gaps = 26/379 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           +GR  +AI           +    T+   L AC D  S+ L R+LH F+       DV V
Sbjct: 188 DGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSV 247

Query: 94  KTKLLSVYAKCGCLDDAREVFEDM--RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
              L+  Y KCG +  +  VF  +    RN+ +W +++ A  ++    E   + FL  + 
Sbjct: 248 FNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHE-EERACMVFLQARK 306

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR---VRNSVLAVYVKCGKL 208
            + P DF+   +L AC   G  E G+ +H+L +K   +CV     V ++++ +Y KCG +
Sbjct: 307 EVEPTDFMISSVLSACAELGGLELGRSVHALALK---ACVEENIFVGSALVDLYGKCGSI 363

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE--IKLGVVTFNILIR 266
            +A + F  M E++ V WN+MI GY  +G+ D A  LF +M      I L  VT   ++ 
Sbjct: 364 EYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLS 423

Query: 267 SYNQLGQCDVAMEMVKRMES-LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
           + ++ G  +  +++ + M    GI P    + C++    ++G   +A +  K M    ++
Sbjct: 424 ACSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMP---IL 480

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLI--NMYSKCEELEAAE 383
           P      + + AC       +G      A K+   D    GN ++  NM +     E A 
Sbjct: 481 PTISVWGALLGACKMHGKTKLG---KIAAEKLFELDPDDSGNHVVFSNMLASAGRWEEAT 537

Query: 384 RVFDMIKD----KDV-YSW 397
            V   ++D    K+V YSW
Sbjct: 538 IVRKEMRDIGIKKNVGYSW 556



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 128/288 (44%), Gaps = 26/288 (9%)

Query: 62  NLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
           ++L AC +   + L R +HA  L    E ++FV + L+ +Y KCG ++ A +VF +M ER
Sbjct: 317 SVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPER 376

Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQD--GLFPDDFLFPKILQACGNCGDFEAG-K 177
           NL TW+AMIG Y+        + LF  M     G+         +L AC   G  E G +
Sbjct: 377 NLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQ 436

Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA-WNSMISGYFQI 236
           +  S+  + G+         V+ +  + G +  A  F + M     ++ W +++      
Sbjct: 437 IFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMH 496

Query: 237 GEND----EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
           G+       A +LF+ +  ++    VV  N+L  +    G+ + A  + K M  +GI  +
Sbjct: 497 GKTKLGKIAAEKLFE-LDPDDSGNHVVFSNMLASA----GRWEEATIVRKEMRDIGIKKN 551

Query: 293 V-FTWTCMIS---------GFAQNGRTSQAL--DLFKEMSFVGVMPNG 328
           V ++W  + +          F +     QA+   L  EM   G +P+ 
Sbjct: 552 VGYSWVAVKNRVHVFQAKDSFHEKNSEIQAMLAKLRGEMKKAGYVPDA 599


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 194/574 (33%), Positives = 304/574 (52%), Gaps = 55/574 (9%)

Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV-GNSLI 370
           ALDL +  S V   P+    +  +  CT L  +  G  +H+  V   F D+ LV  N ++
Sbjct: 74  ALDLIQRGSLV---PDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130

Query: 371 NMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
           NMY+KC  L+ A R+FD +  KD+ +W ++IAG+ Q      A  LF +M    + PN  
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHF 190

Query: 431 TWNVLISGY-----IQNGNEDEA-----------------VDLFQRMGKNDKVK------ 462
           T + L+        +  G +  A                 VD++ R G  D  +      
Sbjct: 191 TLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGM 250

Query: 463 --RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
             ++  SWN+LI+G+ + G+  +AL +  KMQ   F P   T  SV  ACA + A  + K
Sbjct: 251 PTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGK 310

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
            +H  +++  L+    + N+L+D YAK+G+I  ++ +FD +   D+++WN+++ G   HG
Sbjct: 311 WVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHG 370

Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
                LD F+QM   G++PN  +FL ++ A S +G++D G   F  + + Y++ P + HY
Sbjct: 371 LGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYF-ELMKKYKVEPDVPHY 429

Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP 700
              +DL GR G L+ A  FI +MPIEP +++W ALL ACR+H N++L V A ER F+L+P
Sbjct: 430 VTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDP 489

Query: 701 GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT------ 754
            D   + L+  IYA  G+  D  KVRK+ +E+  +      W+E++N V+ FV       
Sbjct: 490 HDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETHP 549

Query: 755 ------GGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFA 808
                 G W E    +    +  VP+     +SH  L ++++E+EE    HSEKLALAFA
Sbjct: 550 QIKEIRGKWEEISGKI--KEIGYVPD-----TSHVLLFVDQQEREEKLQYHSEKLALAFA 602

Query: 809 LIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMH 842
           L+ +      IRI KNIR+C  CH   K+VS ++
Sbjct: 603 LLNTPTG-SPIRIKKNIRVCGDCHAAIKFVSKIY 635



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 217/452 (48%), Gaps = 49/452 (10%)

Query: 58  NTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VFVKTKLLSVYAKCGCLDDAREVFE 115
           N Y  LL+ C     +   R +HA L     +D  + ++  ++++YAKCGCLDDAR +F+
Sbjct: 88  NLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFD 147

Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
           +M  +++ TW+A+I  +S++ R R+ + LF  M++ GL P+ F    +L+A G+    + 
Sbjct: 148 EMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDP 207

Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
           G  +H+  +K G      V ++++ +Y +CG +  A+  F+ M  K  V+WN++ISG+ +
Sbjct: 208 GTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHAR 267

Query: 236 IGENDEAHRLFDKMCREEIK---------------------------------LGVVTF- 261
            GE + A  L  KM R+  +                                 L ++ F 
Sbjct: 268 KGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFI 327

Query: 262 -NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
            N L+  Y + G  D A  +  R+    + PDV +W  M++G AQ+G   + LD F++M 
Sbjct: 328 GNTLLDMYAKAGSIDDAKRVFDRL----VKPDVVSWNTMLTGCAQHGLGKETLDRFEQML 383

Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
            +G+ PN ++    ++AC+    L  G+    L  K     DV    + +++  +   L+
Sbjct: 384 RIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLD 443

Query: 381 AAER-VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES--DVPPNVITWNVLIS 437
            AER + +M  +     W +++ G C+     K  EL +   E   ++ P+     +L+S
Sbjct: 444 RAERFIREMPIEPTAAVWGALL-GACR---MHKNMELGVYAAERAFELDPHDSGPRMLLS 499

Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
               +      V   ++M K   VK+  A SW
Sbjct: 500 NIYASAGRWRDVAKVRKMMKESGVKKQPACSW 531



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 181/400 (45%), Gaps = 45/400 (11%)

Query: 148 MVQDG-LFPDDFLFPKILQACGNCGDFEAGKLMHS-LVIKLGMSCVRRVRNSVLAVYVKC 205
           ++Q G L PD  L+ K+L+ C   G  E G+++H+ LV    +     ++N ++ +Y KC
Sbjct: 77  LIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKC 136

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILI 265
           G L  ARR F+ M  KD V W ++I+G+ Q     +A  LF +M R  ++    T + L+
Sbjct: 137 GCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLL 196

Query: 266 RS-----------------------------------YNQLGQCDVAMEMVKRMESLGIT 290
           ++                                   Y + G  D A      M     T
Sbjct: 197 KASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMP----T 252

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
               +W  +ISG A+ G    AL L  +M      P   T +S  SAC  + AL  G  +
Sbjct: 253 KSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWV 312

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H+  +K G      +GN+L++MY+K   ++ A+RVFD +   DV SWN+M+ G  Q G  
Sbjct: 313 HAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLG 372

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
            +  + F +M    + PN I++  +++    +G  DE +  F+ M K  KV+ +   + +
Sbjct: 373 KETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPHYVT 431

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
            +    ++G  + A    R+M      P      ++L AC
Sbjct: 432 FVDLLGRVGLLDRAERFIREMP---IEPTAAVWGALLGAC 468


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 220/779 (28%), Positives = 377/779 (48%), Gaps = 79/779 (10%)

Query: 64  LQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE--RN 121
           +QA +   ++H+  K+    N      V + T +L+ Y   G LDDA ++F+ M    RN
Sbjct: 126 VQAGLPHEALHIFDKMR---NSAVPDQVALVT-VLNAYISLGKLDDACQLFQQMPIPIRN 181

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
           +  W+ MI  +++   + E +  F  M + G+         +L A  +      G L+H+
Sbjct: 182 VVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHA 241

Query: 182 LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDE 241
             IK G      V +S++ +Y KC     AR+ F+++ +K+ + WN+M+  Y Q G    
Sbjct: 242 HAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSN 301

Query: 242 AHRLFDKM--------------------CREEIKLG---------------VVTFNILIR 266
              LF  M                    C E +++G               +   N LI 
Sbjct: 302 VMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALID 361

Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
            Y + G    A +  + M       D  +W  +I G+ Q    + A  LF+ M   G++P
Sbjct: 362 MYAKAGALKEAGKHFEHM----TYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVP 417

Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
           + V++ S +SAC ++K L  G + H L+VK+G   ++  G+SLI+MYSKC +++ A + +
Sbjct: 418 DEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTY 477

Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS--------- 437
             + ++ V S N++IAGY       ++  L  +MQ   + P+ IT+  LI          
Sbjct: 478 SSMPERSVVSVNALIAGYALKN-TKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVI 536

Query: 438 -------GYIQNG----NEDEAVDLF------QRMGKNDKVKRNTAS------WNSLIAG 474
                    ++ G    +E     L       QR+   + +    +S      W +LI+G
Sbjct: 537 LGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISG 596

Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS 534
           + Q    + AL ++R+M+ +   P+  T ++VL ACA L + +  +EIH  +     +  
Sbjct: 597 HIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLD 656

Query: 535 LPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYVLHGFWHAALDLFDQMK 593
               ++L+D YAK G++  S  +F+ +++K D+I+WNS+I G+  +G+   AL +FD+M 
Sbjct: 657 ELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMT 716

Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
              + P+  TFL ++ A S AG V  G+++F  +   Y I P ++HY+ M+DL GR G L
Sbjct: 717 QSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFL 776

Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIY 713
           +EA EFI+ + +EP++ IW  LL ACRIHG+      A ++L +LEP       L+  +Y
Sbjct: 777 KEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMY 836

Query: 714 AICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
           A  G  ++A  +R+   +   +   G  WI V      FV G  S S  D +   L+++
Sbjct: 837 AASGNWDEARSLRRTMIKKDIQKIPGCSWIVVGQETNLFVAGDISHSSYDEISKALKHL 895



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 200/738 (27%), Positives = 328/738 (44%), Gaps = 106/738 (14%)

Query: 139 REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV 198
             V++ +   +  G  PD F F   L AC    +   G+ +HS VIK G+      + ++
Sbjct: 29  ERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGAL 88

Query: 199 LAVYVKCGKLIWARRFFES--MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKL 256
           + +Y KC  L  AR  F S        V+W ++ISGY Q G   EA  +FDKM    +  
Sbjct: 89  IHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPD 148

Query: 257 GVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP--DVFTWTCMISGFAQNGRTSQALD 314
            V    +L  +Y  LG+ D A ++ ++M      P  +V  W  MISG A+     +AL 
Sbjct: 149 QVALVTVL-NAYISLGKLDDACQLFQQMP----IPIRNVVAWNVMISGHAKTAHYEEALA 203

Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
            F +MS  GV  +  T+ S +SA   L AL  G+ +H+ A+K GF   + V +SLINMY 
Sbjct: 204 FFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYG 263

Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-- 432
           KC+  + A +VFD I  K++  WN+M+  Y Q G+     ELF+ M    + P+  T+  
Sbjct: 264 KCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTS 323

Query: 433 ---------------------------------NVLISGYIQNGNEDEAVDLFQRMGKND 459
                                            N LI  Y + G   EA   F+ M   D
Sbjct: 324 ILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRD 383

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
            +     SWN++I GY Q   +  A  +FR+M      P+ V++ S+L AC  +      
Sbjct: 384 HI-----SWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAG 438

Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
           ++ H   ++  LE++L   +SLID Y+K G+I  +   +  M  + +++ N+LI GY L 
Sbjct: 439 QQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALK 498

Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
                +++L  +M+  GLKP+  TF S+I     +  V LG ++ C+I +   +      
Sbjct: 499 NT-KESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFL 557

Query: 640 YSAMIDLYGRSGKLEEA----MEF-------------------------------IEDMP 664
            ++++ +Y  S +L +A     EF                               + D  
Sbjct: 558 GTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNN 617

Query: 665 IEPDSSIWEALLTAC----RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPE 720
           I PD + +  +L AC     +H   ++  L     FDL   D L    ++ +YA CG  +
Sbjct: 618 ISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDL---DELTSSALVDMYAKCGDVK 674

Query: 721 DALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQN--VPENVT- 777
            +++V   E   T+++      I   +++  F   G+++    +     Q+   P++VT 
Sbjct: 675 SSVQV--FEELATKKDV-----ISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTF 727

Query: 778 ----ARSSHSGLCIEEEE 791
                  SH+G   E  +
Sbjct: 728 LGVLTACSHAGWVYEGRQ 745



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 137/541 (25%), Positives = 247/541 (45%), Gaps = 72/541 (13%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLL 98
           EA+     ++  G K  R+T  ++L A     +++    +HA  +    E  ++V + L+
Sbjct: 200 EALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLI 259

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
           ++Y KC   DDAR+VF+ + ++N+  W+AM+G YS++     V+ELF  M+  G+ PD+F
Sbjct: 260 NMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEF 319

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
            +  IL  C      E G+ +HS +IK   +    V N+++ +Y K G L  A + FE M
Sbjct: 320 TYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHM 379

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
             +D ++WN++I GY Q      A  LF +M  + I    V+   ++ +   +   +   
Sbjct: 380 TYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQ 439

Query: 279 EMVKRMESLGITPDVFTWTCMISGFAQNG------------------------------R 308
           +       LG+  ++F  + +I  +++ G                               
Sbjct: 440 QFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKN 499

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT-DDVLVGN 367
           T ++++L  EM  +G+ P+ +T  S I  C     + +G++IH   VK G       +G 
Sbjct: 500 TKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEFLGT 559

Query: 368 SLINMYSKCEELEAAERVFDMIKD-KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVP 426
           SL+ MY   + L  A  +F      K +  W ++I+G+ Q      A  L+ +M+++++ 
Sbjct: 560 SLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNIS 619

Query: 427 PNVITW-----------------------------------NVLISGYIQNGNEDEAVDL 451
           P+  T+                                   + L+  Y + G+   +V +
Sbjct: 620 PDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQV 679

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           F+ +      K++  SWNS+I G+ + G    AL VF +M  SC  P+ VT L VL AC+
Sbjct: 680 FEELA----TKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACS 735

Query: 512 Y 512
           +
Sbjct: 736 H 736



 Score =  205 bits (521), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 157/567 (27%), Positives = 269/567 (47%), Gaps = 40/567 (7%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFV 93
           NG L+  + +   + + G      TY ++L  C     + + R+LH A +      ++FV
Sbjct: 296 NGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFV 355

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L+ +YAK G L +A + FE M  R+  +W+A+I  Y +++       LF  M+ DG+
Sbjct: 356 NNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGI 415

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD+     IL ACGN    EAG+  H L +KLG+       +S++ +Y KCG +  A +
Sbjct: 416 VPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHK 475

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
            + SM E+  V+ N++I+GY  +    E+  L  +M    +K   +TF  LI       +
Sbjct: 476 TYSSMPERSVVSVNALIAGY-ALKNTKESINLLHEMQILGLKPSEITFASLIDVCKGSAK 534

Query: 274 CDVAME----MVKR-----MESLGIT------------------------PDVFTWTCMI 300
             + ++    +VKR      E LG +                          +  WT +I
Sbjct: 535 VILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALI 594

Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
           SG  QN  +  AL+L++EM    + P+  T  + + AC  L +L  G EIHSL    GF 
Sbjct: 595 SGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFD 654

Query: 361 DDVLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
            D L  ++L++MY+KC +++++ +VF ++   KDV SWNSMI G+ + GY   A ++F +
Sbjct: 655 LDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDE 714

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           M +S + P+ +T+  +++     G   E   +F  M     ++     +  ++    + G
Sbjct: 715 MTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWG 774

Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN 539
               A     K++     PN +   ++L AC       + +     ++    +SS P + 
Sbjct: 775 FLKEAEEFIDKLEVE---PNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYV- 830

Query: 540 SLIDTYAKSGNIVYSRTIFDGMSSKDI 566
            L + YA SGN   +R++   M  KDI
Sbjct: 831 LLSNMYAASGNWDEARSLRRTMIKKDI 857



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 168/732 (22%), Positives = 320/732 (43%), Gaps = 118/732 (16%)

Query: 47  SIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCG 105
           S    G    + T+   L AC    ++HL R +H+  +    E   F +  L+ +YAKC 
Sbjct: 37  SFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCN 96

Query: 106 CLDDAREVFEDMRERNLYT--WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKI 163
            L  AR +F      +L+T  W+A+I  Y +     E + +F  M ++   PD      +
Sbjct: 97  SLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKM-RNSAVPDQVALVTV 155

Query: 164 LQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM--DEK 221
           L A                                   Y+  GKL  A + F+ M    +
Sbjct: 156 LNA-----------------------------------YISLGKLDDACQLFQQMPIPIR 180

Query: 222 DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK---------------LGVVTFNILIR 266
           + VAWN MISG+ +    +EA   F +M +  +K               L  +   +L+ 
Sbjct: 181 NVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVH 240

Query: 267 SY-----------------NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT 309
           ++                 N  G+C +  +  +  +++    ++  W  M+  ++QNG  
Sbjct: 241 AHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAIS-QKNMIVWNAMLGVYSQNGFL 299

Query: 310 SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL 369
           S  ++LF +M   G+ P+  T TS +S C   + L +G ++HS  +K  FT ++ V N+L
Sbjct: 300 SNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNAL 359

Query: 370 INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           I+MY+K   L+ A + F+ +  +D  SWN++I GY Q      A+ LF +M    + P+ 
Sbjct: 360 IDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDE 419

Query: 430 ITWNVLISG-----YIQNGNE-----------------DEAVDLFQRMGK--------ND 459
           ++   ++S       ++ G +                    +D++ + G         + 
Sbjct: 420 VSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSS 479

Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
             +R+  S N+LIAGY  L     ++ +  +MQ     P+ +T  S++  C     S KV
Sbjct: 480 MPERSVVSVNALIAGY-ALKNTKESINLLHEMQILGLKPSEITFASLIDVCK---GSAKV 535

Query: 520 ---KEIHGCVLRRSLESSLPVM-NSLIDTYAKSGNIVYSRTIFDGMSS-KDIITWNSLIC 574
               +IH  +++R L      +  SL+  Y  S  +  +  +F   SS K I+ W +LI 
Sbjct: 536 ILGLQIHCAIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALIS 595

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQI 633
           G++ +     AL+L+ +M+   + P++ TF++++ A +L   +  G+++   I    + +
Sbjct: 596 GHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDL 655

Query: 634 IPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE 693
             +    SA++D+Y + G ++ +++  E++  + D   W +++     +G    A+   +
Sbjct: 656 DELTS--SALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFD 713

Query: 694 RLFD--LEPGDV 703
            +    + P DV
Sbjct: 714 EMTQSCITPDDV 725



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 194/388 (50%), Gaps = 9/388 (2%)

Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
           V  W   + G  ++  + + L  +      G  P+  T    +SAC  L+ L +G  +HS
Sbjct: 13  VRQWNWRVQG-TKHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHS 71

Query: 353 LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY--SWNSMIAGYCQAGYC 410
             +K G         +LI++Y+KC  L  A  +F       ++  SW ++I+GY QAG  
Sbjct: 72  CVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLP 131

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
            +A  +F KM+ S VP  V    VL + YI  G  D+A  LFQ+M       RN  +WN 
Sbjct: 132 HEALHIFDKMRNSAVPDQVALVTVL-NAYISLGKLDDACQLFQQM---PIPIRNVVAWNV 187

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +I+G+ +      AL  F +M       +  T+ SVL A A L A N    +H   +++ 
Sbjct: 188 MISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQG 247

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
            ESS+ V +SLI+ Y K      +R +FD +S K++I WN+++  Y  +GF    ++LF 
Sbjct: 248 FESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFL 307

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
            M S G+ P+  T+ SI+   +    +++G+++  +I +  +    +   +A+ID+Y ++
Sbjct: 308 DMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIK-KRFTSNLFVNNALIDMYAKA 366

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTA 678
           G L+EA +  E M    D   W A++  
Sbjct: 367 GALKEAGKHFEHMTYR-DHISWNAIIVG 393


>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 207/663 (31%), Positives = 329/663 (49%), Gaps = 102/663 (15%)

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
           + W+ +I  YS       + E++  MV+ G+ PDD  FP +L+AC +  +   G+ +H  
Sbjct: 8   FLWNTLIRGYSIAGVGGGL-EVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGS 66

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           V+KLG                                E D    N+++S Y   G   +A
Sbjct: 67  VVKLGF-------------------------------ESDVFVGNTLLSFYGNCGGLRDA 95

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
            R+FD+M  +                                       D+ +W  MI  
Sbjct: 96  GRVFDEMPEK---------------------------------------DLVSWNTMIGV 116

Query: 303 FAQNG-RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
           F+ NG     ALD+F+ M   G+ PN +TI+S +    +L+    G E+H  +++MG   
Sbjct: 117 FSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLES 176

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           D+ + NSLI+MY+K      A  VF  +  K+V SWN+MIA + Q  +   A  L  +MQ
Sbjct: 177 DIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQ 236

Query: 422 ESDVPPNVITW-NVLIS----GYIQNGNEDEA--------VDLF--------------QR 454
           +    PN +T+ NVL +    G ++ G E  A         DLF               +
Sbjct: 237 DYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLK 296

Query: 455 MGKN--DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
           + +N  D   R+  S+N LI G+ Q    + +L +F +MQ      + V+ +  L ACA 
Sbjct: 297 LARNVFDTSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACAN 356

Query: 513 LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSL 572
           L A  + KEIHG +LR+     L V NSL+D Y K G I  +R IFD M++KD+ +WN++
Sbjct: 357 LTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTM 416

Query: 573 ICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQ 632
           I GY + G    A+DLF+ M+   ++ +  +F++++ A S  G+++ G+K F  + +   
Sbjct: 417 ILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDEL-KARG 475

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAI 692
           I P   HY+ M+DL GR+G +EEA E I+ +PI PD++IW ALL ACRI+GN++LA  A 
Sbjct: 476 IEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWAA 535

Query: 693 ERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTF 752
           E LF+L+P       L+  +YA  G+ ++A ++R+L +    + S G  W+++    + F
Sbjct: 536 EHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSWVQIGEQAHAF 595

Query: 753 VTG 755
           V G
Sbjct: 596 VVG 598



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 214/435 (49%), Gaps = 32/435 (7%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLLS 99
            + V + +   G +   +T+  +L+AC D+  +   R++H + + L  E DVFV   LLS
Sbjct: 25  GLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLS 84

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQ-RWREVVELFFLMVQDGLFPDDF 158
            Y  CG L DA  VF++M E++L +W+ MIG +S +   +R+ +++F LM+ +GL P+  
Sbjct: 85  FYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSI 144

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
                L        F+AG+ +H   I++G+     + NS++ +Y K G    A   F  +
Sbjct: 145 TISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKL 204

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM 278
           D K+ V+WN+MI+ + Q      A  L  +M         VTF  ++ +  ++G      
Sbjct: 205 DAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGK 264

Query: 279 EMVKRMESLGITPDVF------------------------------TWTCMISGFAQNGR 308
           E+  R   +G   D+F                              ++  +I G +Q   
Sbjct: 265 EIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDTSLRDEVSYNILIVGHSQTSD 324

Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
            S++L LF EM  +G+  + V+   A+SAC +L A+  G EIH   ++  F   + V NS
Sbjct: 325 CSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANS 384

Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
           L++ Y+KC  +  A  +FD + +KDV SWN+MI GY   G    A +LF  M++ DV  +
Sbjct: 385 LLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYD 444

Query: 429 VITWNVLISGYIQNG 443
            +++  ++S     G
Sbjct: 445 SVSFIAVLSACSHGG 459



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 171/358 (47%), Gaps = 12/358 (3%)

Query: 41  AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLS 99
           A+ ++  +   G      T+ N+L AC     +   +++HA  +++    D+FV   L  
Sbjct: 228 AVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTD 287

Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
           +YAK G L  AR VF D   R+  +++ +I  +S+     E + LF  M   GL  D+  
Sbjct: 288 MYAKSGHLKLARNVF-DTSLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVS 346

Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
           F   L AC N    + GK +H  +++        V NS+L  Y KCG++  AR  F+ M 
Sbjct: 347 FMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMT 406

Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAME 279
            KD  +WN+MI GY  +GE D A  LF+ M +++++   V+F  ++ + +  G  +   +
Sbjct: 407 NKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRK 466

Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
               +++ GI P    + CM+    + G   +A +L K +  V   P+     + + AC 
Sbjct: 467 YFDELKARGIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIV---PDANIWGALLGACR 523

Query: 340 ---DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
              +L+  A   E H   +K   +    +   L NMY++    + A R+ +++K + V
Sbjct: 524 IYGNLELAAWAAE-HLFELKPEHSGYYTL---LSNMYAETGRWDEANRIRELMKSRGV 577



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/494 (22%), Positives = 205/494 (41%), Gaps = 56/494 (11%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH-AFLNLVTEIDVFVKTKLL 98
           +A+ +   +  +G K    T  + L   ++       R++H + + +  E D+F+   L+
Sbjct: 126 DALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLI 185

Query: 99  SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
            +YAK G   +A  VF  +  +N+ +W+AMI  +++++     V L   M   G  P+  
Sbjct: 186 DMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSV 245

Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESM 218
            F  +L AC   G    GK +H+  I +G +    V N++  +Y K G L  AR  F++ 
Sbjct: 246 TFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFDT- 304

Query: 219 DEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------------- 261
             +D V++N +I G+ Q  +  E+  LF +M    +K   V+F                 
Sbjct: 305 SLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGK 364

Query: 262 ------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGF 303
                             N L+  Y + G+  +A  +  RM +     DV +W  MI G+
Sbjct: 365 EIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTN----KDVASWNTMILGY 420

Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDV 363
              G    A+DLF+ M    V  + V+  + +SAC+    L  G +        G     
Sbjct: 421 GMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDELKARGIEPTQ 480

Query: 364 LVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAG---YCQAGYCGKAYELFIK 419
           +    ++++  +   + EAAE +  +    D   W +++     Y        A E   +
Sbjct: 481 MHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFE 540

Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
           ++    P +   + +L + Y + G  DEA  + + M      K    SW        Q+G
Sbjct: 541 LK----PEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSW-------VQIG 589

Query: 480 QKNNALGVFRKMQS 493
           ++ +A  V  K++ 
Sbjct: 590 EQAHAFVVGEKIEG 603



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 1/140 (0%)

Query: 39  NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKL 97
           +E++++   +   G K    +++  L AC +  +I   +++H F L  +  I +FV   L
Sbjct: 326 SESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSL 385

Query: 98  LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
           L  Y KCG +  AR +F+ M  +++ +W+ MI  Y         ++LF  M +D +  D 
Sbjct: 386 LDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDS 445

Query: 158 FLFPKILQACGNCGDFEAGK 177
             F  +L AC + G  E G+
Sbjct: 446 VSFIAVLSACSHGGLLEKGR 465


>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 654

 Score =  313 bits (803), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 200/612 (32%), Positives = 313/612 (51%), Gaps = 48/612 (7%)

Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
           +I    + G   QA+ L          P   T    I++C +  +L+ G+++H   V  G
Sbjct: 49  LIQSLCRGGNLKQAVQLL----CCEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSG 104

Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
              D  +   LINMY     ++ A +VFD  ++K ++ WN++      A        L+ 
Sbjct: 105 LDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYG 164

Query: 419 KMQESDVPPNVITWNVLISGYI---------QNGNEDEA-----------------VDLF 452
           +M    +P N  T+  ++   +         + G E  A                 +D++
Sbjct: 165 QMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVY 224

Query: 453 QRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKM--QSSCFYPNCVT 502
            R G              +N  SW+++IA Y +      AL +F+ M  ++    PN +T
Sbjct: 225 ARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPIT 284

Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
           ++SVL ACA L A    K +H  VLRR L+S+LPV+N+LI  Y + G I   + +FD M 
Sbjct: 285 MVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMK 344

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            +D+I+WNSLI  Y +HG    A+ +F+ M + G+ P+  TF++++ A S AG+V+  K 
Sbjct: 345 KRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKI 404

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
           +F S+   Y+I P +EHY+ M+D+ GR+ +L+EA+E I++M  +P  ++W +LL +CRIH
Sbjct: 405 LFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIH 464

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC- 741
            N++LA  A   LF+LEP +     L+  IYA      D  +VRK + E+        C 
Sbjct: 465 CNVELAERASAMLFELEPKNAGNYVLLSHIYAKSRMWNDVRRVRK-QLESRGLQKIPSCS 523

Query: 742 WIEVKNLVYTFVT----GGWSESYSDLLYSWLQNVP-ENVTARSSHSGLCIEEEEKEEIS 796
           WIEVK  +Y+ V+        E     L + L  +  +    +++     ++EEEKE I 
Sbjct: 524 WIEVKRKIYSLVSIEEYNPQIEELCAFLITLLTEIKNQGYVPQTNVVTYDLDEEEKERIV 583

Query: 797 GIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHH 856
             HS KLA+AF LI +S+    IRI  N+R+C  CH   K+VS   + EI L D    H 
Sbjct: 584 LGHSGKLAVAFGLINTSKG-EIIRISNNLRLCEDCHAFMKFVSKFTNREILLRDVNRFHC 642

Query: 857 FKNGQCSCGDYW 868
           FK+G CSCGDYW
Sbjct: 643 FKDGVCSCGDYW 654



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 151/295 (51%), Gaps = 11/295 (3%)

Query: 52  GAKVRRNTYINLLQACIDSN----SIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGC 106
           G    R TY  +L+AC+ S      +   +++HA  L    E  V V T LL VYA+ G 
Sbjct: 170 GIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGY 229

Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG--LFPDDFLFPKIL 164
           +  A  VF  M ++N+ +WSAMI  Y++++   + +ELF +M+ +     P+      +L
Sbjct: 230 VSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVL 289

Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
           QAC +    E GKL+H+ V++ G+     V N+++ +Y +CG++   +R F+ M ++D +
Sbjct: 290 QACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVI 349

Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
           +WNS+IS Y   G   +A ++F+ M    +    +TF  ++ + +  G  + A  + + M
Sbjct: 350 SWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESM 409

Query: 285 -ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
                I P +  + CM+    +  R  +A++L + M F    P      S + +C
Sbjct: 410 LNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDF---KPGPTVWGSLLGSC 461



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 114/228 (50%), Gaps = 7/228 (3%)

Query: 287 LGITPD--VFTWTCMISGFAQNGRTSQALDLFKEMSFVG--VMPNGVTITSAISACTDLK 342
            G  PD  + +W+ MI+ +A+N    +AL+LF+ M       +PN +T+ S + AC  L 
Sbjct: 237 FGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLA 296

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
           AL  G  +H+  ++ G    + V N+LI MY +C E+   +RVFD +K +DV SWNS+I+
Sbjct: 297 ALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLIS 356

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
            Y   G   KA ++F  M    V P+ IT+  ++      G  +EA  LF+ M    ++ 
Sbjct: 357 IYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIH 416

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
                +  ++     LG+ N        +Q+  F P      S+L +C
Sbjct: 417 PRMEHYACMV---DILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSC 461



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/365 (23%), Positives = 159/365 (43%), Gaps = 50/365 (13%)

Query: 17  TKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA 76
           TK       D  +  LC  G L +A+ +L        K    T+  L+ +CI+ NS+   
Sbjct: 38  TKDIKSNNNDDLIQSLCRGGNLKQAVQLLCCEPNPTKK----TFELLINSCIEQNSLSDG 93

Query: 77  RKLH-AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
             +H   +    + D ++ TKL+++Y   G +D A +VF++ RE+ ++ W+A+  A +  
Sbjct: 94  VDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMA 153

Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACG----NCGDFEAGKLMHSLVIKLGMSCV 191
            R  +++ L+  M   G+  + F +  +L+AC     +      GK +H+ +++ G    
Sbjct: 154 SRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGH 213

Query: 192 RRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-- 249
             V  ++L VY + G + +A   F +M +K+ V+W++MI+ Y +     +A  LF  M  
Sbjct: 214 VHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMML 273

Query: 250 -----------------------------------CREEIKLGVVTFNILIRSYNQLGQC 274
                                               R  +   +   N LI  Y + G+ 
Sbjct: 274 EACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEI 333

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
                +   M+      DV +W  +IS +  +G   +A+ +F+ M   GV P+ +T  + 
Sbjct: 334 STGQRVFDYMKK----RDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITV 389

Query: 335 ISACT 339
           + AC+
Sbjct: 390 LCACS 394



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 167/397 (42%), Gaps = 61/397 (15%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           LI  Y  LG  D A ++            +F W  +    A   R    L L+ +M+++G
Sbjct: 115 LINMYCDLGSVDHACKVFDETRE----KTIFVWNAIFRALAMASRGEDLLVLYGQMNWIG 170

Query: 324 VMPNGVTITSAISACT----DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
           +  N  T T  + AC      +  L  G EIH+  ++ G+   V V  +L+++Y++   +
Sbjct: 171 IPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYV 230

Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF--IKMQESDVPPNVITW----- 432
             A  VF  + DK++ SW++MIA Y +     KA ELF  + ++  D  PN IT      
Sbjct: 231 SYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQ 290

Query: 433 ------------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
                                         N LI+ Y + G       +F  M K D + 
Sbjct: 291 ACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVI- 349

Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
               SWNSLI+ Y   G    A+ +F  M +    P+ +T ++VL AC++     + K +
Sbjct: 350 ----SWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKIL 405

Query: 523 HGCVLRR-SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIIT-WNSLICGYVLHG 580
              +L +  +   +     ++D   ++  +  +  +   M  K   T W SL+    +  
Sbjct: 406 FESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRI-- 463

Query: 581 FWHAALDLFDQMKS--FGLKP-NRGTFLSIILAHSLA 614
             H  ++L ++  +  F L+P N G +  ++L+H  A
Sbjct: 464 --HCNVELAERASAMLFELEPKNAGNY--VLLSHIYA 496


>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 640

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 195/676 (28%), Positives = 333/676 (49%), Gaps = 87/676 (12%)

Query: 95  TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
            KLL +Y+K G +  A ++F++  E N + W+A+I  ++ + ++      F  M ++ + 
Sbjct: 40  NKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIV 99

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P +F    +L+A    G  + G L                   V  + V+CG        
Sbjct: 100 PLNFTIASVLKAVSRLGRIKDGDL-------------------VYGLAVRCGY------- 133

Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQC 274
                E D V  N MI  + + GE   A ++FD+M   +     V++N +I  Y   G+ 
Sbjct: 134 -----EFDLVVKNVMIELFMRCGEMGSARQMFDEMEERD----AVSWNSMITGYGNNGRV 184

Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
           D+A ++  RME      +V +WT MI G+ + G   +A  LF+ M               
Sbjct: 185 DIARKLFDRMEE----RNVISWTSMIQGYVKAGDLLEARVLFERMP-------------- 226

Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
                                      D+     +++ Y     L AA  +F+++   DV
Sbjct: 227 -------------------------EKDLASWKVMVSAYMSVGNLVAARNLFELMPIHDV 261

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQR 454
            +WN MI+G C+AG    A E F +MQE     NV +W ++I GYI+ G+ D A  +F +
Sbjct: 262 GTWNLMISGCCKAGEMDAAKEFFDRMQER----NVASWVMIIDGYIKVGDVDAARSVFDQ 317

Query: 455 MGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV 514
           M +     +N  +W+++I GY + G   ++L +++  +     P+    L ++ AC+ L 
Sbjct: 318 MPE-----KNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQLG 372

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
             +  + +    +  SL  +L V+ SLID YAK GNI  +  +F+ +  KD+  ++++I 
Sbjct: 373 VPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVIT 432

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
            +  HG    A+ LF +M+   +KP+   FL ++ A +  G+V  G+++F  + + Y I 
Sbjct: 433 AFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGIQ 492

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER 694
           P  +HY+ M+D+ GR+G LEEA   I  MP+ P++++W ALL+ACR+H N+ LA  A   
Sbjct: 493 PSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNATVWGALLSACRVHLNVQLAEAAATE 552

Query: 695 LFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           LF +EP +     L+  IYA  G+ +D  KVR + REN  R + G  WIE+ ++++ FV 
Sbjct: 553 LFQIEPNNSGNYVLLFNIYADAGQWDDFSKVRAMIRENRVRKNRGSSWIELGSVIHEFVM 612

Query: 755 GGWSESYSDLLYSWLQ 770
           G  S   S+ ++  L+
Sbjct: 613 GDKSHFDSERIFFMLE 628



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 98/201 (48%), Gaps = 12/201 (5%)

Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
           S+ SS   +N L+  Y+K G + Y+  +FD     +   W +LI G+  +  +  A   F
Sbjct: 31  SIASSDLTLNKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFF 90

Query: 590 DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPMIEHYSAMIDLYG 648
            +M    + P   T  S++ A S  G +  G  V+     C Y+   ++++   MI+L+ 
Sbjct: 91  IKMHRENIVPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKN--VMIELFM 148

Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD-LEPGDVLIQR 707
           R G++  A +  ++M  E D+  W +++T    +G +D+A     +LFD +E  +V+   
Sbjct: 149 RCGEMGSARQMFDEME-ERDAVSWNSMITGYGNNGRVDIA----RKLFDRMEERNVISWT 203

Query: 708 LILQIYAICGKPEDALKVRKL 728
            ++Q Y   G   D L+ R L
Sbjct: 204 SMIQGYVKAG---DLLEARVL 221


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 187/575 (32%), Positives = 300/575 (52%), Gaps = 40/575 (6%)

Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
           ++  AIS+CT +   +    IH+  +K     D  +G+ L++MY K    E A+R+FD +
Sbjct: 67  SLVFAISSCTSVSYCS---AIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEM 123

Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ-ESDVPPNVITWNVLISGYIQNGNEDEA 448
            +KD+ SWNS+++G    GY G     F +M+ ES   PN +T   ++S     G  DE 
Sbjct: 124 PNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEG 183

Query: 449 VDLFQ---RMGKNDKVK---------------------------RNTASWNSLIAGYQQL 478
             L     ++G + K K                           R+  SWNS++  +   
Sbjct: 184 KSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHN 243

Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
           G     + +F  M+ +   P+  T++++L AC       + + IH  + R    + + + 
Sbjct: 244 GYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIA 303

Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
            +L++ YAK G +  S  IF+ +  +D I W +++ GY +H     A+ LFD M   G++
Sbjct: 304 TALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVE 363

Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
            +  TF  ++ A S +G+V+ GKK F  ++E Y++ P ++HYS M+DL GRSG+LE+A E
Sbjct: 364 VDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYE 423

Query: 659 FIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGK 718
            I+ MP+EP S +W ALL ACR++GN++L     E+L  L+P D     ++  IY+  G 
Sbjct: 424 LIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGL 483

Query: 719 PEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-- 776
             DA KVR L +E     + G  +IE  N ++ FV G      SD +++ L+ +   +  
Sbjct: 484 WRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIRE 543

Query: 777 ---TARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHE 833
                ++      I+EE K ++   HSEKLA+AF L+ +      I I KN+R+C  CH 
Sbjct: 544 AGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLI-ITKNLRICGDCHS 602

Query: 834 TAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           TAK+ S++    I + DSK  HHF +G CSC DYW
Sbjct: 603 TAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 637



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 185/369 (50%), Gaps = 17/369 (4%)

Query: 32  LCGNGRLNEAITVLDSIATQ-GAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID 90
           L G G L   +     + T+ G +    T ++++ AC D  ++   + LH    +V ++ 
Sbjct: 138 LSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHG---VVVKLG 194

Query: 91  VFVKTK----LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
           +  K K    L+++Y K G LD A ++FE+M  R+L +W++M+  ++ +    + ++LF 
Sbjct: 195 MSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFN 254

Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
           LM + G+ PD      +L+AC + G     + +H+ + + G +    +  ++L +Y K G
Sbjct: 255 LMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLG 314

Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
           +L  +   FE + ++D +AW +M++GY       EA +LFD M +E +++  VTF  L+ 
Sbjct: 315 RLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLS 374

Query: 267 SYNQLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVM 325
           + +  G  +   +  + M E   + P +  ++CM+    ++GR   A +L K M    + 
Sbjct: 375 ACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMP---ME 431

Query: 326 PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD--DVLVGNSLINMYSKCEELEAAE 383
           P+     + + AC     + +G E+    + +  +D  + ++   L N+YS       A 
Sbjct: 432 PSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIM---LSNIYSAAGLWRDAS 488

Query: 384 RVFDMIKDK 392
           +V  ++K++
Sbjct: 489 KVRALMKER 497



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 200/442 (45%), Gaps = 35/442 (7%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM- 148
           D F+  +L+S+Y K G  +DA+ +F++M  ++L +W++++   S        +  F  M 
Sbjct: 96  DGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMR 155

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
            + G  P++     ++ AC + G  + GK +H +V+KLGMS   +V NS++ +Y K G L
Sbjct: 156 TESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFL 215

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             A + FE M  +  V+WNSM+  +   G  ++   LF+ M R  I     T   L+R+ 
Sbjct: 216 DAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRAC 275

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP-N 327
              G    A  +   +   G   D+   T +++ +A+ GR + + D+F+E+     +   
Sbjct: 276 TDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWT 335

Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
            +    A+ AC         +++  L VK G   D +    L++  S    +E  ++ F+
Sbjct: 336 AMLAGYAVHACG-----REAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFE 390

Query: 388 MIKDKDVYS-------WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
           ++   +VY        ++ M+    ++G    AYEL   M    + P+   W  L+    
Sbjct: 391 IM--SEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMP---MEPSSGVWGALLGACR 445

Query: 441 QNGNEDEAVDLFQRMGKNDKV-KRNTASWNSL--IAGYQQLGQKNNALGVFRKMQSSCFY 497
             GN +   ++ +++   D    RN    +++   AG  +   K  AL   R++  +   
Sbjct: 446 VYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRN--- 502

Query: 498 PNCVTILSVLPACAYLVASNKV 519
                     P C+++   NK+
Sbjct: 503 ----------PGCSFIEHGNKI 514


>gi|255583926|ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527557|gb|EEF29678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 679

 Score =  313 bits (802), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 206/639 (32%), Positives = 324/639 (50%), Gaps = 92/639 (14%)

Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
           + R+  +W   +   +R   +RE +  +  M+  G+ PD + FP +L+A     D   GK
Sbjct: 38  QSRSQASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGK 97

Query: 178 LMHSLVIKLGM-SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
            +H+ V+K G  S    + NS++  Y KC +L    + F+ ++E+D V+WNS+IS + + 
Sbjct: 98  QIHAHVVKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRA 157

Query: 237 GENDEAHRLFDKMCREEI-----------------------KLG--------------VV 259
            E + A   F  M  E++                       +LG                
Sbjct: 158 QEWELALEAFRFMLAEDLEPSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWSTF 217

Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
           T N L+  Y  LG+ D A  + K  E      ++ +W  MIS F+QN R  +AL   + M
Sbjct: 218 TNNALMTMYANLGRLDDAKFLFKLFEDR----NLISWNTMISSFSQNERFVEALMSLRYM 273

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG-FTDDVLVGNSLINMYSKCEE 378
              GV P+GVT+ S + AC+ L+ L  G EIH+ A++ G   ++  VG++L++MY  C +
Sbjct: 274 VLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGSALVDMYCNCGQ 333

Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE-SDVPPNVITWNVL-- 435
           + +  RVFD I ++    WN+MIAGY Q  +  KA  LFI+M   + + PN  T   +  
Sbjct: 334 VGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVP 393

Query: 436 -------------ISGYIQNGN-------EDEAVDLFQRMGKNDKVK--------RNTAS 467
                        I GY+   +       ++  +D++ RM K +  K        R+  S
Sbjct: 394 ASARCESFFSKESIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVS 453

Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQ-------------SSCFYPNCVTILSVLPACAYLV 514
           WN++I GY   G  N+AL +  +MQ              +CF PN +T+++VLP CA L 
Sbjct: 454 WNTMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLA 513

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
           A  K KEIH   +R +L S + V ++L+D YAK G +  SR +FD M  K++ITWN ++ 
Sbjct: 514 ALAKGKEIHAYAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVM 573

Query: 575 GYVLHGFWHAALDLFDQMKSFG-----LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
            Y +HG    AL+LF  M + G     +KP   T ++I+ A S +GMVD G K+F  + +
Sbjct: 574 AYGMHGNGEEALELFKDMVAKGDNVGEVKPTEVTMIAILAACSHSGMVDEGLKLFHRMKD 633

Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPD 668
            + I P  +HY+ + DL GR+GK+E+A +FI  MP + D
Sbjct: 634 DHGIEPGPDHYACVADLLGRAGKVEQAYDFINTMPSDFD 672



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 205/442 (46%), Gaps = 60/442 (13%)

Query: 73  IHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAY 132
           + L +++H +         F    L+++YA  G LDDA+ +F+   +RNL +W+ MI ++
Sbjct: 198 LRLGKQIHGYCFRNGHWSTFTNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSF 257

Query: 133 SRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR 192
           S+++R+ E +     MV +G+ PD      +L AC        GK +H+  ++ G     
Sbjct: 258 SQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIEN 317

Query: 193 RVRNSVLA-VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC- 250
               S L  +Y  CG++   RR F+ + E+    WN+MI+GY Q   +++A  LF +M  
Sbjct: 318 SFVGSALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVA 377

Query: 251 --------------------------REEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
                                     +E I   V+  ++    Y Q    +  M+M  RM
Sbjct: 378 VAGLCPNTTTMASIVPASARCESFFSKESIHGYVIKRDLERDRYVQ----NALMDMYSRM 433

Query: 285 ESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVG------------ 323
             + I+  +F         +W  MI+G+  +G  + AL +  EM                
Sbjct: 434 RKMEISKTIFDSMEVRDIVSWNTMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQA 493

Query: 324 -VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
              PN +T+ + +  C  L ALA G EIH+ AV+     +V VG++L++MY+KC  L  +
Sbjct: 494 CFKPNSITLMTVLPGCASLAALAKGKEIHAYAVRNALASEVTVGSALVDMYAKCGCLNLS 553

Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM-----QESDVPPNVITWNVLIS 437
            RVFD +  K+V +WN ++  Y   G   +A ELF  M        +V P  +T   +++
Sbjct: 554 RRVFDQMPIKNVITWNVIVMAYGMHGNGEEALELFKDMVAKGDNVGEVKPTEVTMIAILA 613

Query: 438 GYIQNGNEDEAVDLFQRMGKND 459
               +G  DE + LF RM K+D
Sbjct: 614 ACSHSGMVDEGLKLFHRM-KDD 634



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 201/434 (46%), Gaps = 65/434 (14%)

Query: 311 QALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF-TDDVLVGNSL 369
           +A+  + +M   GV P+       + A T L+ L +G +IH+  VK G+ +  V + NSL
Sbjct: 60  EAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHVVKYGYESSSVAIANSL 119

Query: 370 INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
           +N Y KC EL+   +VFD I ++D+ SWNS+I+ +C+A     A E F  M   D+ P+ 
Sbjct: 120 VNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSS 179

Query: 430 IT------------------WNVLISGY-IQNGN-----EDEAVDLFQRMGKNDKVK--- 462
            T                      I GY  +NG+      +  + ++  +G+ D  K   
Sbjct: 180 FTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHWSTFTNNALMTMYANLGRLDDAKFLF 239

Query: 463 -----RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASN 517
                RN  SWN++I+ + Q  +   AL   R M      P+ VT+ SVLPAC+YL    
Sbjct: 240 KLFEDRNLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEMLG 299

Query: 518 KVKEIHGCVLRRS--LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
             KEIH   LR    +E+S  V ++L+D Y   G +   R +FDG+  +    WN++I G
Sbjct: 300 TGKEIHAYALRSGDLIENSF-VGSALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAG 358

Query: 576 YVLHGFWHAALDLFDQMKSF-GLKPNRGTFLSIILA----------HSLAGMV---DLGK 621
           Y  +     AL LF +M +  GL PN  T  SI+ A           S+ G V   DL +
Sbjct: 359 YAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKESIHGYVIKRDLER 418

Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
             +                +A++D+Y R  K+E +    + M +  D   W  ++T   I
Sbjct: 419 DRYVQ--------------NALMDMYSRMRKMEISKTIFDSMEVR-DIVSWNTMITGYVI 463

Query: 682 HGNIDLAVLAIERL 695
            G  + A+L +  +
Sbjct: 464 SGCYNDALLMLHEM 477


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  313 bits (802), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 200/616 (32%), Positives = 300/616 (48%), Gaps = 43/616 (6%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
           + +V TWT +I+  +++ +  QAL  F  M   G+ PN  T ++ + AC     L+ G +
Sbjct: 162 STNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQ 221

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           IH+L  K  F +D  V  +L++MY+KC  +  AE VFD +  +++ SWNSMI G+ +   
Sbjct: 222 IHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKL 281

Query: 410 CGKAYELFIK--------------------MQESDVPPN-------------VITWNVLI 436
            G+A  +F +                    + E D                 V   N L+
Sbjct: 282 YGRAIGVFREVLSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLV 341

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
             Y + G  ++A  LF   G  D V     +WN +I G  +      A   F+ M     
Sbjct: 342 DMYCKCGLFEDATKLFCGGGDRDVV-----TWNVMIMGCFRCRNFEQACTYFQAMIREGV 396

Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
            P+  +  S+  A A + A  +   IH  VL+     +  + +SL+  Y K G+++ +  
Sbjct: 397 EPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQ 456

Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
           +F      +++ W ++I  +  HG  + A+ LF++M + G+ P   TF+S++ A S  G 
Sbjct: 457 VFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGK 516

Query: 617 VDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALL 676
           +D G K F S+   + I P +EHY+ M+DL GR G+LEEA  FIE MP EPDS +W ALL
Sbjct: 517 IDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALL 576

Query: 677 TACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRN 736
            AC  H N+++     ERLF LEP +     L+  IY   G  E+A +VR+L   N  R 
Sbjct: 577 GACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRK 636

Query: 737 SFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS--SHSGLCIEEEEKEE 794
             G  WI+VKN  + F     S S +  +Y  LQ + E +  R   + +       E  E
Sbjct: 637 ESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEGSE 696

Query: 795 ISGI--HSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
              +  HSEKLALAF L+        +RI KN+R C  CH   K+ S +   EI + D  
Sbjct: 697 EQSLWCHSEKLALAFGLLVLPPGS-PVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDIN 755

Query: 853 CLHHFKNGQCSCGDYW 868
             H F NG CSC DYW
Sbjct: 756 RFHRFTNGSCSCMDYW 771



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 193/450 (42%), Gaps = 42/450 (9%)

Query: 97  LLSVYAKCGCLDDAREVFEDMRE--RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
           LL +YAKCG +     +F        N+ TW+ +I   SR  +  + +  F  M   G++
Sbjct: 138 LLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIY 197

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
           P+ F F  IL AC +      G+ +H+L+ K        V  ++L +Y KCG ++ A   
Sbjct: 198 PNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENV 257

Query: 215 FESMDEKDGVAWNSMISGYFQ-------IGENDEAHRL---------------------F 246
           F+ M  ++ V+WNSMI G+ +       IG   E   L                     F
Sbjct: 258 FDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLGPDQVSISSVLSACAGLVELDF 317

Query: 247 DKMCREEI-KLGVVTF----NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
            K     I K G+V      N L+  Y + G      E   ++   G   DV TW  MI 
Sbjct: 318 GKQVHGSIVKRGLVGLVYVKNSLVDMYCKCG----LFEDATKLFCGGGDRDVVTWNVMIM 373

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
           G  +     QA   F+ M   GV P+  + +S   A   + AL  G  IHS  +K G   
Sbjct: 374 GCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVK 433

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           +  + +SL+ MY KC  +  A +VF   K+ +V  W +MI  + Q G   +A +LF +M 
Sbjct: 434 NSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEML 493

Query: 422 ESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK 481
              V P  IT+  ++S     G  D+    F  M     +K     +  ++    ++G+ 
Sbjct: 494 NEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRL 553

Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACA 511
             A    R ++S  F P+ +   ++L AC 
Sbjct: 554 EEAC---RFIESMPFEPDSLVWGALLGACG 580



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 215/473 (45%), Gaps = 57/473 (12%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACI------DSNSIHLARKLHAFLNLVTEIDVFV 93
           +A+T  + + T G      T+  +L AC       +   IH     H FLN     D FV
Sbjct: 183 QALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLN-----DPFV 237

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T LL +YAKCG +  A  VF++M  RNL +W++MI  + +++ +   + +F  ++  G 
Sbjct: 238 ATALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG- 296

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
            PD      +L AC    + + GK +H  ++K G+  +  V+NS++ +Y KCG    A +
Sbjct: 297 -PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATK 355

Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK---------------LGV 258
            F    ++D V WN MI G F+    ++A   F  M RE ++               +  
Sbjct: 356 LFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAA 415

Query: 259 VTFNILIRSY----NQLGQCDVAMEMVKRMESLGITPDVFT------------WTCMISG 302
           +T   +I S+      +    ++  +V      G   D +             WT MI+ 
Sbjct: 416 LTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITV 475

Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVKMGFTD 361
           F Q+G  ++A+ LF+EM   GV+P  +T  S +SAC+    +  G +  +S+A       
Sbjct: 476 FHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKP 535

Query: 362 DVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
            +     ++++  +   LE A R  + M  + D   W +++      G CGK   + +  
Sbjct: 536 GLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGALL------GACGKHANVEMGR 589

Query: 421 QESDV-----PPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           + ++      P N   + +L + YI++G  +EA ++ + MG N   K +  SW
Sbjct: 590 EVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVRKESGCSW 642



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 117/498 (23%), Positives = 211/498 (42%), Gaps = 78/498 (15%)

Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDG--VAWNSMISGYFQIGENDEAHRLFDKMCREE 253
           N++L +Y KCG +      F +        V W ++I+   +  +  +A   F++M    
Sbjct: 136 NTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTG 195

Query: 254 IKLGVVTF-------------------NILIRSYNQLGQCDVA---MEMVKRMESLGITP 291
           I     TF                   + LI  +  L    VA   ++M  +  S+ +  
Sbjct: 196 IYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAE 255

Query: 292 DVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLK 342
           +VF         +W  MI GF +N    +A+ +F+E+  +G  P+ V+I+S +SAC  L 
Sbjct: 256 NVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLV 313

Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
            L  G ++H   VK G    V V NSL++MY KC   E A ++F    D+DV +WN MI 
Sbjct: 314 ELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIM 373

Query: 403 GYCQAGYCGKAYELFIKMQESDVPPN---------------------VITWNVLISGYIQ 441
           G  +     +A   F  M    V P+                     +I  +VL +G+++
Sbjct: 374 GCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVK 433

Query: 442 NGN-EDEAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
           N       V ++ + G          +  + N   W ++I  + Q G  N A+ +F +M 
Sbjct: 434 NSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEML 493

Query: 493 SSCFYPNCVTILSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
           +    P  +T +SVL AC++     +  K  +      +++  L     ++D   + G +
Sbjct: 494 NEGVVPEYITFVSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRL 553

Query: 552 VYSRTIFDGMS-SKDIITWNSLI--CGYVLHGFWHAALDLFDQM--KSFGLKP-NRGTFL 605
             +    + M    D + W +L+  CG       HA +++  ++  + F L+P N G ++
Sbjct: 554 EEACRFIESMPFEPDSLVWGALLGACGK------HANVEMGREVAERLFKLEPDNPGNYM 607

Query: 606 SIILAHSLAGMVDLGKKV 623
            +   +   GM++   +V
Sbjct: 608 LLSNIYIRHGMLEEADEV 625



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 130/310 (41%), Gaps = 68/310 (21%)

Query: 461 VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVK 520
           + R  A W  L   YQ         GV +  Q    + +   +  +L   A L +     
Sbjct: 70  MSREVAFWLQLFTSYQS--------GVPKFHQ----FSSVPDLKHLLNNAAKLKSLKHAT 117

Query: 521 EIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM--SSKDIITWNSLICGYVL 578
           +IH  ++  +  +SL  +N+L+  YAK G+I ++  +F+     S +++TW +LI     
Sbjct: 118 QIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLLFNTYPHPSTNVVTWTTLINQLSR 177

Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSI-TECYQIIPMI 637
                 AL  F++M++ G+ PN  TF +I+ A + A ++  G+++   I   C+   P +
Sbjct: 178 SNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFV 237

Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMP--------------------------------I 665
              +A++D+Y + G +  A    ++MP                                +
Sbjct: 238 A--TALLDMYAKCGSMLLAENVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLSL 295

Query: 666 EPDSSIWEALLTAC----------RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
            PD     ++L+AC          ++HG+I    L          G V ++  ++ +Y  
Sbjct: 296 GPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLV---------GLVYVKNSLVDMYCK 346

Query: 716 CGKPEDALKV 725
           CG  EDA K+
Sbjct: 347 CGLFEDATKL 356


>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
          Length = 610

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 180/578 (31%), Positives = 302/578 (52%), Gaps = 49/578 (8%)

Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
           +AI+ C   +AL  G ++H+  V  G+   + +   L+ MY++C  LE A  V D + ++
Sbjct: 40  AAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGMPER 99

Query: 393 DVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW-------------------- 432
           +V SW +MI+GY Q     +A++LFI M  +   PN  T                     
Sbjct: 100 NVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQ 159

Query: 433 -----------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
                            + L+  Y ++ N  EA  +F  +   D V     S+ ++++GY
Sbjct: 160 VHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVV-----SYTTILSGY 214

Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
            +LG    AL +FR++ +     N VT   +L A + L + +  K++HG +LRR L   +
Sbjct: 215 TRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFM 274

Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
            + NSLID Y+K G ++YSR +FD M  + +++WN+++ GY  HG  +  + LF  M   
Sbjct: 275 ALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCD- 333

Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
            +KP+  T L+++L +S  G+VD G  +F  I +    +   +HY  +IDL GRSG+LE+
Sbjct: 334 KVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEK 393

Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
           A+  I+ MP +P  +IW +LL ACR+H N+ +     ++LFD+EP +     ++  IYA 
Sbjct: 394 ALLLIQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAA 453

Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN 775
               +D  ++RKL  + T     G+ W+ +  +++TF +        + +   +  +   
Sbjct: 454 ARMWKDVFRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAA 513

Query: 776 VTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVH 830
           + A      L      +++E+KE +   HSEKLA+ F L+ S+ +  TI+++KN+R+CV 
Sbjct: 514 IKAAGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLM-STPSDLTIQVMKNLRICVD 572

Query: 831 CHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           CH  AK+VS ++  EI L D    H    G C+CGDYW
Sbjct: 573 CHNFAKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 610



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 213/455 (46%), Gaps = 50/455 (10%)

Query: 56  RRNTYINLLQACIDSNSIHLARKLHAFLNLVT---EIDVFVKTKLLSVYAKCGCLDDARE 112
           R + Y   +  C+   ++   R++HA   +VT      +++ T+L+ +YA+CG L+DA  
Sbjct: 34  RFHDYDAAITECVGRRALREGRQVHA--RMVTAGYRPALYLATRLVIMYARCGALEDAHN 91

Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC-GNCG 171
           V + M ERN+ +W+AMI  YS+++R  E  +LF +M++ G  P++F    +L +C G+ G
Sbjct: 92  VLDGMPERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQG 151

Query: 172 DFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
             +   K +H+  IK        V +S+L +Y +   +  ARR F+ +  +D V++ +++
Sbjct: 152 IHQHQIKQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTIL 211

Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA------------- 277
           SGY ++G ++EA  LF ++  E ++   VTF++L+ + + L   D               
Sbjct: 212 SGYTRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELP 271

Query: 278 ---------MEMVKRMESLGITPDVF---------TWTCMISGFAQNGRTSQALDLFKEM 319
                    ++M  +   L  +  VF         +W  M+ G+ ++G   + + LF+ M
Sbjct: 272 FFMALQNSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFM 331

Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS----LINMYSK 375
               V P+ VT+ + +   +    +  G+++    VK       L+       +I++  +
Sbjct: 332 C-DKVKPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVK---EQSTLLNTQHYGCVIDLLGR 387

Query: 376 CEELEAAERVFDMIKDKDVYS-WNSMIAGYCQAGYCGKAYELFIKMQESDV-PPNVITWN 433
             +LE A  +   +  +   + W S++ G C+        E F+  +  D+ P N   + 
Sbjct: 388 SGQLEKALLLIQKMPFQPTRAIWGSLL-GACRVHANVHVGE-FVAQKLFDIEPENAGNYV 445

Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
           +L + Y       +   L + M K   +K    SW
Sbjct: 446 ILSNIYAAARMWKDVFRLRKLMLKKTVIKEPGRSW 480



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 160/311 (51%), Gaps = 14/311 (4%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHL--ARKLHAF-LNLVTEIDV 91
           N R  EA  +   +   G +    T  ++L +C  S  IH    +++HAF +    E+ +
Sbjct: 114 NERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQVHAFAIKKNFELHM 173

Query: 92  FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
           FV + LL +YA+   + +AR VF+ +  R++ +++ ++  Y+R     E + LF  +  +
Sbjct: 174 FVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGLDEEALNLFRQLYNE 233

Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
           G+  +   F  +L A       + GK +H L+++  +     ++NS++ +Y KCGKL+++
Sbjct: 234 GMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYS 293

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           RR F++M E+  V+WN+M+ GY + G   E  +LF  MC +++K   VT   ++  Y+  
Sbjct: 294 RRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMC-DKVKPDSVTLLAVLLGYSHG 352

Query: 272 GQCDVAMEM----VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           G  D  ++M    VK   +L  T     + C+I    ++G+  +AL L ++M F    P 
Sbjct: 353 GLVDEGLDMFDHIVKEQSTLLNTQH---YGCVIDLLGRSGQLEKALLLIQKMPF---QPT 406

Query: 328 GVTITSAISAC 338
                S + AC
Sbjct: 407 RAIWGSLLGAC 417



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 177/353 (50%), Gaps = 46/353 (13%)

Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM--E 349
           +V +WT MISG++QN R ++A DLF  M   G  PN  T+ S +++CT  + +      +
Sbjct: 100 NVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQIKQ 159

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H+ A+K  F   + VG+SL++MY++ E ++ A RVFDM+  +DV S+ ++++GY + G 
Sbjct: 160 VHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRLGL 219

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLIS---------------GYIQNGN-------EDE 447
             +A  LF ++    +  N +T++VL++               G I           ++ 
Sbjct: 220 DEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQNS 279

Query: 448 AVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
            +D++ + GK        ++  +R+  SWN+++ GY + G     + +FR M      P+
Sbjct: 280 LIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCDKV-KPD 338

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS-----LIDTYAKSGNIVYS 554
            VT+L+VL   ++    ++  ++   +++   +S+L  +N+     +ID   +SG +  +
Sbjct: 339 SVTLLAVLLGYSHGGLVDEGLDMFDHIVKE--QSTL--LNTQHYGCVIDLLGRSGQLEKA 394

Query: 555 RTIFDGMSSKDI-ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP-NRGTFL 605
             +   M  +     W SL+    +H   H     F   K F ++P N G ++
Sbjct: 395 LLLIQKMPFQPTRAIWGSLLGACRVHANVHVG--EFVAQKLFDIEPENAGNYV 445


>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
 gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
          Length = 723

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 207/702 (29%), Positives = 351/702 (50%), Gaps = 91/702 (12%)

Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGM-SCVRRVRNSVLAVYVKCGKLIWARRFFE 216
           F F  + + C         +++H+  ++  + S  R V N ++ +Y   G    ARR F+
Sbjct: 103 FTFHFVFRCCAAGAGAGLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFD 162

Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
            +  KD V W ++I G  + G  DEA RL                               
Sbjct: 163 EVPVKDAVVWATVIGGLVRWGLLDEARRL------------------------------- 191

Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
              +V+  E      +V +WT +I+G+++ GR + A+  F  M   GV P+ V +  A+S
Sbjct: 192 ---LVQAPER-----NVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIGALS 243

Query: 337 ACTDLKALAMGMEIHSLAVK--MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
           AC+ LK L  G  +H L  K  +  TD ++V  +LI+MY+KC ++  A+ VFD +     
Sbjct: 244 ACSKLKNLEFGRLLHLLVGKKRIQMTDKLVV--TLIDMYAKCGDIAQAQAVFDAVGR--- 298

Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQR 454
                           G+  E                WNV+I GY + G+ D A  LF +
Sbjct: 299 ----------------GQKPE---------------PWNVIIDGYCKLGHVDIARSLFDQ 327

Query: 455 MGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLV 514
           MG  D +     ++NS+I GY   G+  +AL +F +++      +  T++S+L ACA L 
Sbjct: 328 MGARDVI-----TFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLG 382

Query: 515 ASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLIC 574
           A  + + +H  + +R +E  + ++ +L+D Y K G +  +  +F  M  +D+ TW+++I 
Sbjct: 383 ALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIA 442

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
           G   +G    AL+ F QMK  G +P   T+++++ A S + +++ G++ F  +   +++ 
Sbjct: 443 GLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLH 502

Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER 694
           P IEHY  MIDL  RSG L+EAM  ++ MP++P++ IW ++L+ACR+H NIDLA  A E 
Sbjct: 503 PQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEH 562

Query: 695 LFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
           L  L P +  +   +  IY    +  +A ++R L  E   + + G   I V   V+ FV 
Sbjct: 563 LLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLMEEQGVKKTAGYSSITVAGQVHKFVV 622

Query: 755 GGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEISGIHSEKLALAFAL 809
              S  ++  + + ++ +   +     +  +S   + ++EEEKE+    HSEK+A+AF L
Sbjct: 623 NDQSHPWTLEIITMMEEIARRLKSAGYSPATSRIAVDVDEEEKEQALLAHSEKIAIAFGL 682

Query: 810 IGSSQAPH-TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLAD 850
           I  S  P+  I I+KN+R+C  CH   K +S + + EI + D
Sbjct: 683 I--SLPPNLPIHIMKNLRVCEDCHSAIKLISQLWNREIIVRD 722



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 192/422 (45%), Gaps = 43/422 (10%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           D  V   ++    + G LD+AR +     ERN+ +W+++I  YSR  R  + V  F  M+
Sbjct: 168 DAVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCML 227

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
            DG+ PD+      L AC    + E G+L+H LV K  +    ++  +++ +Y KCG + 
Sbjct: 228 SDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIA 287

Query: 210 WARRFFESMDE-KDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
            A+  F+++   +    WN +I GY ++G  D A  LFD+M   +    V+TFN +I  Y
Sbjct: 288 QAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARD----VITFNSMITGY 343

Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
              G+   A+++  ++   G+  D F                                  
Sbjct: 344 IHSGRLRDALQLFMQLRRHGMRADNF---------------------------------- 369

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
            T+ S ++AC  L AL  G  +H+   +    +DV +  +L++MY KC  ++ A  VF  
Sbjct: 370 -TVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHR 428

Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
           + ++DV++W++MIAG    G    A E F +M+     P  +T+  +++    +   +E 
Sbjct: 429 MGERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEG 488

Query: 449 VDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
              F  M    K+      +  +I    + G  + A+ + + M      PN V   S+L 
Sbjct: 489 RQHFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMP---MQPNAVIWASILS 545

Query: 509 AC 510
           AC
Sbjct: 546 AC 547



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 98/430 (22%), Positives = 187/430 (43%), Gaps = 42/430 (9%)

Query: 36  GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLN----------L 85
           GR  +A+   + + + G +      I  L AC    ++   R LH  +           +
Sbjct: 214 GRPADAVYCFNCMLSDGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLV 273

Query: 86  VTEIDVFVK-----------------------TKLLSVYAKCGCLDDAREVFEDMRERNL 122
           VT ID++ K                         ++  Y K G +D AR +F+ M  R++
Sbjct: 274 VTLIDMYAKCGDIAQAQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDV 333

Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
            T+++MI  Y    R R+ ++LF  + + G+  D+F    +L AC + G    G+ +H+ 
Sbjct: 334 ITFNSMITGYIHSGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHAS 393

Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
           + +  +     +  +++ +Y+KCG++  A   F  M E+D   W++MI+G    G   +A
Sbjct: 394 IEQRIVEEDVYLVTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDA 453

Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMIS 301
              F +M R+  +   VT+  ++ + +     +   +    M SL  + P +  + CMI 
Sbjct: 454 LESFCQMKRDGFQPTSVTYIAVLTACSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMID 513

Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
             A++G   +A+ L + M    + PN V   S +SAC   K + +        +K+   +
Sbjct: 514 LLARSGLLDEAMHLVQTMP---MQPNAVIWASILSACRVHKNIDLARHAAEHLLKLAPEE 570

Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
           D  V   L N+Y    +   A+R+  +++++ V       AGY      G+ ++  +  Q
Sbjct: 571 DA-VYVQLYNIYIDSRQWVEAKRIRMLMEEQGVKK----TAGYSSITVAGQVHKFVVNDQ 625

Query: 422 ESDVPPNVIT 431
                  +IT
Sbjct: 626 SHPWTLEIIT 635



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 113/244 (46%), Gaps = 16/244 (6%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
           +GRL +A+ +   +   G +    T ++LL AC    ++   R LHA +   + E DV++
Sbjct: 346 SGRLRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYL 405

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
            T L+ +Y KCG +D+A  VF  M ER+++TWSAMI   + +    + +E F  M +DG 
Sbjct: 406 VTALVDMYMKCGRVDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDALESFCQMKRDGF 465

Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSV------LAVYVKCGK 207
            P    +  +L AC +      G+   +      M  + ++   +      + +  + G 
Sbjct: 466 QPTSVTYIAVLTACSHSSLLNEGRQHFN-----EMRSLHKLHPQIEHYGCMIDLLARSGL 520

Query: 208 LIWARRFFESMD-EKDGVAWNSMISG---YFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
           L  A    ++M  + + V W S++S    +  I     A     K+  EE  + V  +NI
Sbjct: 521 LDEAMHLVQTMPMQPNAVIWASILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNI 580

Query: 264 LIRS 267
            I S
Sbjct: 581 YIDS 584


>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
          Length = 606

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 184/547 (33%), Positives = 294/547 (53%), Gaps = 46/547 (8%)

Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
           P+ F W   +   A+      A+ LF  +    V P+  T +S + AC +L  L+ G  +
Sbjct: 91  PETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRIL 150

Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
           H +  K+GF  ++ + N ++++Y+ C E+                               
Sbjct: 151 HGVVEKVGFRSNLYLQNMIVHLYASCGEM------------------------------- 179

Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
           G+A  LF KM + DV    +TWN++I+  I+ G+ + A DLF RM +     RN  SW S
Sbjct: 180 GEARLLFEKMPQRDV----VTWNIMIAQLIKQGDHEGAYDLFSRMPE-----RNVRSWTS 230

Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
           +IAGY Q G+   A+ +F KM+ +    N VT+++VL ACA L A +    IH    R  
Sbjct: 231 MIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHG 290

Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
            + ++ + N+LID Y K G +  +  +F+ M  + +++W+++I G  +HG    AL LF 
Sbjct: 291 FKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFS 350

Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
            M   G++PN  TF+ ++ A S  G++  G++ F S+T  Y IIP IEHY  M+DL  R+
Sbjct: 351 DMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRA 410

Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLIL 710
           G L EA EFI +MP++P+  +W ALL ACR+H N+++A  AI+ L +L+P +     ++ 
Sbjct: 411 GLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLS 470

Query: 711 QIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ 770
            IYA  G+ ED  +VRK  ++   + + G   I V  +V+ FV G  S   ++ ++   +
Sbjct: 471 NIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWE 530

Query: 771 NVPENVTAR-----SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNI 825
            + E +  +     +S   L IEE EK +    HSEKLAL F L+ ++ A   IRI+KN+
Sbjct: 531 ELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLM-NTPAETPIRIMKNL 589

Query: 826 RMCVHCH 832
           R+C  CH
Sbjct: 590 RICEDCH 596



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 142/559 (25%), Positives = 248/559 (44%), Gaps = 72/559 (12%)

Query: 71  NSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE--DMRERNLYTWSA 127
           NS    R++HA  +     + +   T++  V A       A+++FE  + ++   + W++
Sbjct: 39  NSPFELRQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFECVEKQKPETFVWNS 98

Query: 128 MIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG 187
            + A +      + + LF+ + Q  + PD F    +L+AC N  D   G+++H +V K+G
Sbjct: 99  CLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVG 158

Query: 188 MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFD 247
                 ++N ++ +Y  CG++                                EA  LF+
Sbjct: 159 FRSNLYLQNMIVHLYASCGEM-------------------------------GEARLLFE 187

Query: 248 KMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
           KM + +    VVT+NI+I    + G  + A ++  RM       +V +WT MI+G+ Q G
Sbjct: 188 KMPQRD----VVTWNIMIAQLIKQGDHEGAYDLFSRMPER----NVRSWTSMIAGYVQCG 239

Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
           +  +A+ LF +M   GV  N VT+ + ++AC DL AL +GM IH  + + GF  +V + N
Sbjct: 240 KAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISN 299

Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
           +LI+MY KC  LE A +VF+ ++++ V SW++MI G    G   +A  LF  M +  + P
Sbjct: 300 TLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEP 359

Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
           N +T+  L+      G   E    F  M ++  +      +  ++    + G  + A   
Sbjct: 360 NGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEF 419

Query: 488 FRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS-----LI 542
              M      PN V   ++L AC      +K  E+    ++  LE  L  +N      L 
Sbjct: 420 ILNMP---MKPNGVVWGALLGACRV----HKNVEMAEEAIKHLLE--LDPLNDGYYVVLS 470

Query: 543 DTYAKSG---NIVYSRTIFDGMSSKDIITWNSLICGYVLHGF-------------WHAAL 586
           + YA++G   +    R        K    W+S+    V+H F             +    
Sbjct: 471 NIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRWE 530

Query: 587 DLFDQMKSFGLKPNRGTFL 605
           +L ++M+  G  PN    L
Sbjct: 531 ELLEEMRLKGYVPNTSVVL 549



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 171/378 (45%), Gaps = 46/378 (12%)

Query: 62  NLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMR-- 118
           ++L+AC++   +   R LH  +  V    +++++  ++ +YA CG + +AR +FE M   
Sbjct: 133 SVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQR 192

Query: 119 -----------------------------ERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
                                        ERN+ +W++MI  Y +  + +E + LF  M 
Sbjct: 193 DVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKME 252

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
           + G+  ++     +L AC + G  + G  +H    + G     R+ N+++ +YVKCG L 
Sbjct: 253 EAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLE 312

Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
            A + FE M+E+  V+W++MI G    G  +EA RLF  M +  I+   VTF  L+ + +
Sbjct: 313 EACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACS 372

Query: 270 QLGQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
            +G           M    GI P +  + CM+   ++ G   +A +    M    + PNG
Sbjct: 373 HMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMP---MKPNG 429

Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN---SLINMYSKCEELEAAERV 385
           V   + + AC   K + M  E    A+K     D L       L N+Y++    E   RV
Sbjct: 430 VVWGALLGACRVHKNVEMAEE----AIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARV 485

Query: 386 FDMIKDKDVYS---WNSM 400
              +KD+ V     W+S+
Sbjct: 486 RKFMKDRQVKKTPGWSSI 503



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 127/282 (45%), Gaps = 43/282 (15%)

Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK 518
           +K K  T  WNS +    +     +A+ +F +++     P+  T  SVL AC  L+  + 
Sbjct: 87  EKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSN 146

Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN-------- 570
            + +HG V +    S+L + N ++  YA  G +  +R +F+ M  +D++TWN        
Sbjct: 147 GRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIK 206

Query: 571 -----------------------SLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
                                  S+I GYV  G    A+ LF +M+  G+K N  T +++
Sbjct: 207 QGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAV 266

Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
           + A +  G +DLG ++    +  +     +   + +ID+Y + G LEEA +  E+M  E 
Sbjct: 267 LAACADLGALDLGMRIH-EYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEME-ER 324

Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFD------LEPGDV 703
               W A++    +HG  + A+    RLF       +EP  V
Sbjct: 325 TVVSWSAMIGGLAMHGRAEEAL----RLFSDMSQVGIEPNGV 362


>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 202/616 (32%), Positives = 297/616 (48%), Gaps = 56/616 (9%)

Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
           LI SY        A  +  +  SL   P    W  MI  +++   + ++L LF +M   G
Sbjct: 93  LIHSYIGCRNLSFARIVFDQFPSL---PPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHG 149

Query: 324 --VMPNGVTITSAISACTDLKAL-AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
                +  T T   +AC+    L   G  +H + VK G+  D+ VGNSL+NMYS    + 
Sbjct: 150 RPTSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMV 209

Query: 381 AAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
            A+RVFD +  +DV                                   ITW  ++ GY 
Sbjct: 210 DAKRVFDEMPQRDV-----------------------------------ITWTSVVKGYA 234

Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ-SSCFYPN 499
             G    A +LF  M       RN  SW  ++AGY      N AL  F  M       PN
Sbjct: 235 MRGELVRARELFDMMPG-----RNDVSWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPN 289

Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
              ++S+L ACA+L A ++ K IH  + +  +  S  +  +LID YAK G I  +R +FD
Sbjct: 290 EAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFD 349

Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
           G+  +D++TW S+I G  +HG     L  F +M + G KP+  T L ++   S +G+V+ 
Sbjct: 350 GLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEE 409

Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
           G  +F  +   + I+P +EHY  +IDL GR+G+LE A E I+ MP+EPD   W ALL+AC
Sbjct: 410 GLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSAC 469

Query: 680 RIHGNIDLAVLAIERLFDLEPGDVLIQRLIL-QIYAICGKPEDALKVRKLERENTRRNSF 738
           RIHG++DL    I  + +L PG      ++L  +YA  G+ E   KVRK   +       
Sbjct: 470 RIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRKAMSQRGSEGCP 529

Query: 739 GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSG------LCIEEEEK 792
           G  WIE+  +V+ F+           +   L  V   ++    +          + EE+K
Sbjct: 530 GCSWIEIDGVVHEFLAADKLHPRISEINKKLNEVLRRISIEGGYVPSTKQVLFDLNEEDK 589

Query: 793 EEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
           E+    HSEKLA+AF L+ + +   TIRI KN+R C  CH   K +S++ + EI + D  
Sbjct: 590 EQAVSWHSEKLAVAFGLLSTQEG--TIRITKNLRTCEDCHSAMKTISLVFNREIVVRDRS 647

Query: 853 CLHHFKNGQCSCGDYW 868
             H F+ G CSC DYW
Sbjct: 648 RFHTFRYGNCSCTDYW 663



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 177/420 (42%), Gaps = 47/420 (11%)

Query: 96  KLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG-- 152
            L+  Y  C  L  AR VF+          W+ MI AYS+    +E + LF  M+  G  
Sbjct: 92  PLIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRP 151

Query: 153 LFPDDFLFPKILQACGNCGDFEA-GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
              D + F  +  AC         G+ +H +V+K G      V NS++ +Y    +++ A
Sbjct: 152 TSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDA 211

Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
           +R F+ M ++D + W S++ GY   GE   A  LFD M                      
Sbjct: 212 KRVFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMP--------------------- 250

Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVT 330
           G+ DV                  +W  M++G+  +   ++AL  F +M     V PN   
Sbjct: 251 GRNDV------------------SWAVMVAGYVGHRFYNEALQCFNDMLCHDEVKPNEAV 292

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
           + S +SAC  L AL  G  IH    K        +  +LI+MY+KC  ++ A RVFD + 
Sbjct: 293 LVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRIDCARRVFDGLH 352

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
            +D+ +W SMI+G    G   +    F +M      P+ IT   +++G   +G  +E + 
Sbjct: 353 KRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLS 412

Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
           +F  M     +      +  LI     LG+       F  ++S    P+ V   ++L AC
Sbjct: 413 IFHDMIPLWGIVPKLEHYGCLI---DLLGRAGRLESAFEAIKSMPMEPDVVAWRALLSAC 469



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 121/251 (48%), Gaps = 5/251 (1%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF-LM 148
           DV   T ++  YA  G L  ARE+F+ M  RN  +W+ M+  Y   + + E ++ F  ++
Sbjct: 222 DVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDML 281

Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
             D + P++ +   IL AC + G  + GK +H  + K  +     +  +++ +Y KCG++
Sbjct: 282 CHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRI 341

Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
             ARR F+ + ++D + W SMISG    G   E    F +M  E  K   +T   ++   
Sbjct: 342 DCARRVFDGLHKRDLLTWTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGC 401

Query: 269 NQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPN 327
           +  G  +  + +   M  L GI P +  + C+I    + GR   A +  K M    + P+
Sbjct: 402 SHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMP---MEPD 458

Query: 328 GVTITSAISAC 338
            V   + +SAC
Sbjct: 459 VVAWRALLSAC 469



 Score = 48.5 bits (114), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 18/227 (7%)

Query: 482 NNALGVFRKMQSSCF-YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS 540
           N +  ++    +S F  P+  T + +L     L    ++K+IH  V+   L  +  ++  
Sbjct: 36  NTSSAIWEPSGTSSFSLPSHSTFVQLLKKRPSL---TQIKQIHAQVVTHGLAQNTSLLGP 92

Query: 541 LIDTYAKSGNIVYSRTIFDGMSS-KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKP 599
           LI +Y    N+ ++R +FD   S    I WN +I  Y        +L LF QM + G +P
Sbjct: 93  LIHSYIGCRNLSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHG-RP 151

Query: 600 ---NRGTFLSIILAHSL-AGMVDLGKKVF-CSITECYQIIPMIEHYSAMIDLYGRSGKLE 654
              ++ TF  +  A S    +   G+ V    + + Y+    +   ++++++Y    ++ 
Sbjct: 152 TSADKYTFTFVFTACSRHPTLRGYGENVHGMVVKDGYESDIFVG--NSLVNMYSIFSRMV 209

Query: 655 EAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
           +A    ++MP + D   W +++    + G +  A      LFD+ PG
Sbjct: 210 DAKRVFDEMP-QRDVITWTSVVKGYAMRGELVRA----RELFDMMPG 251


>gi|326531932|dbj|BAK01342.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 414

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 172/417 (41%), Positives = 259/417 (62%), Gaps = 3/417 (0%)

Query: 452 FQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
           FQ M ++  +K++TASWN LIAG    G  + AL +FR+MQS    P+ +TILS++PA A
Sbjct: 1   FQTM-ESYGMKKDTASWNILIAGSVHNGYFDRALRIFRQMQSVLIKPDYITILSIIPAFA 59

Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
            LVA+ KV+EIH C+   +LE    + N+LI+ Y+KSG++  +  +FD  SS++ I+WN 
Sbjct: 60  NLVAAWKVREIHACIFHHNLEMDGKIANALINAYSKSGDLAGACAVFDRHSSRNTISWNC 119

Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
           +I  ++LHG     +D F +MK  G+ P+  T  ++I A+ + GMV  G++VF ++ + Y
Sbjct: 120 IIVAHLLHGSPTKVVDYFFKMKQQGVLPDHATLTAVIKAYGMEGMVSEGREVFLNMDKDY 179

Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
            + P ++HY+AM+DL GRSG+L+EA   I++MP+ P+ ++WE+LLT+ R+HGN+ LA+LA
Sbjct: 180 NVTPDLDHYAAMVDLLGRSGRLQEAYALIDEMPLTPNLTLWESLLTSARMHGNVRLALLA 239

Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
              +  +EP D +IQ ++  +  + GK  D  KV    +E         C  E++N+VY 
Sbjct: 240 ATEMSMIEPNDPIIQVVVSNLQDLAGKSFDVPKVTVHGKERM-LGGVESCSTEIRNMVYL 298

Query: 752 FVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIG 811
           F TG    S        L  V   ++  S+ +G    EEEKEE++G+H EKLA+  A I 
Sbjct: 299 FSTGDKVASEDVAAELKLMMVQTGLSMLSAGNGALEVEEEKEEVAGLHCEKLAI-IAGIS 357

Query: 812 SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           +S    +IRI+K  RMC HCH  AK VS  +  +I + D K LH F+NG CSC DYW
Sbjct: 358 NSPPFRSIRIIKTARMCNHCHTFAKLVSEKYGRQILIKDPKYLHKFENGNCSCEDYW 414



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 100/210 (47%)

Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
           + MES G+  D  +W  +I+G   NG   +AL +F++M  V + P+ +TI S I A  +L
Sbjct: 2   QTMESYGMKKDTASWNILIAGSVHNGYFDRALRIFRQMQSVLIKPDYITILSIIPAFANL 61

Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
            A     EIH+         D  + N+LIN YSK  +L  A  VFD    ++  SWN +I
Sbjct: 62  VAAWKVREIHACIFHHNLEMDGKIANALINAYSKSGDLAGACAVFDRHSSRNTISWNCII 121

Query: 402 AGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKV 461
             +   G   K  + F KM++  V P+  T   +I  Y   G   E  ++F  M K+  V
Sbjct: 122 VAHLLHGSPTKVVDYFFKMKQQGVLPDHATLTAVIKAYGMEGMVSEGREVFLNMDKDYNV 181

Query: 462 KRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
             +   + +++    + G+   A  +  +M
Sbjct: 182 TPDLDHYAAMVDLLGRSGRLQEAYALIDEM 211



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 1/144 (0%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
           NG  + A+ +   + +   K    T ++++ A  +  +    R++HA   +   E+D  +
Sbjct: 26  NGYFDRALRIFRQMQSVLIKPDYITILSIIPAFANLVAAWKVREIHACIFHHNLEMDGKI 85

Query: 94  KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
              L++ Y+K G L  A  VF+    RN  +W+ +I A+       +VV+ FF M Q G+
Sbjct: 86  ANALINAYSKSGDLAGACAVFDRHSSRNTISWNCIIVAHLLHGSPTKVVDYFFKMKQQGV 145

Query: 154 FPDDFLFPKILQACGNCGDFEAGK 177
            PD      +++A G  G    G+
Sbjct: 146 LPDHATLTAVIKAYGMEGMVSEGR 169


>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
 gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 204/690 (29%), Positives = 334/690 (48%), Gaps = 107/690 (15%)

Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
           D LF D   F K+L  C           +H+ +IK   +    ++N ++ VY KCG +  
Sbjct: 13  DLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDV 72

Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
           AR+ F+ M E++  +WNS+I  + + G  D+A  +F+KM                    Q
Sbjct: 73  ARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKM-------------------PQ 113

Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
           + QC                    +W  MISGF Q+GR  +AL  F +M   G + N  +
Sbjct: 114 VDQC--------------------SWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYS 153

Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
             SA+SAC  L+ L +G +IHSL  +  +  DV +G++L++MYSKC  +E A+ VFD + 
Sbjct: 154 FGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMT 213

Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------------ 432
            +   SWNS+I  Y Q G   +A ++F++M +  V P+ +T                   
Sbjct: 214 VRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQ 273

Query: 433 ------------------NVLISGYIQNGNEDEAVDLFQRM---------------GKND 459
                             N L+  Y +    +EA  +F  M                K  
Sbjct: 274 IHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKAS 333

Query: 460 KVK-----------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLP 508
           KVK           ++  +WN+LIAG  Q G+   AL +FR ++    +P   T  ++L 
Sbjct: 334 KVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLN 393

Query: 509 ACAYLVASNKVKEIHGCVLRRSL------ESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
           ACA L      ++ H  VL+         +S + V NSLID Y K G++     +F  M 
Sbjct: 394 ACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHML 453

Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
            KD ++WN++I GY  +GF + AL++F +M   G  P+  T + ++ A S AG++D G+ 
Sbjct: 454 EKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRY 513

Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
            F S+T  + ++P+ +HY+ M+DL GR+G LEEA   IE+M ++PD+ +W +LL AC++H
Sbjct: 514 YFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVH 573

Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
            NI L    +++L +++P +     L+  +YA     ++ ++VRKL R+       G  W
Sbjct: 574 RNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCSW 633

Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
           IE++  +  F+      +    +Y  L+ +
Sbjct: 634 IEIQGELNVFMVKDKRHARKKEIYMVLRTI 663



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 244/554 (44%), Gaps = 104/554 (18%)

Query: 58  NTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
           + +  LL  C  S S     ++HA  +      + F++ +L+ VY KCGC+D AR++F+ 
Sbjct: 20  SPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDR 79

Query: 117 MRERNLYTWSAMIGAYSR-----------------DQ--------------RWREVVELF 145
           M ERN+++W+++I A+++                 DQ              R+ E +  F
Sbjct: 80  MLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYF 139

Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
             M   G   +++ F   L AC    D + G  +HSLV +        + ++++ +Y KC
Sbjct: 140 AQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKC 199

Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR-------------- 251
           G++ +A+  F+ M  +  V+WNS+I+ Y Q G  DEA ++F +M +              
Sbjct: 200 GRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVV 259

Query: 252 ----------------------EEIKLGVVTFNILIRSY---NQLGQCDVAMEMV----- 281
                                 +E +  ++  N L+  Y   N++ +  +  +M+     
Sbjct: 260 SACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSV 319

Query: 282 -------------------KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
                              + M S  +  DV TW  +I+G  QNG   +AL LF+ +   
Sbjct: 320 VSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRE 379

Query: 323 GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF------TDDVLVGNSLINMYSKC 376
            V P   T  + ++AC +L  L +G + HS  +K GF        DV VGNSLI+MY KC
Sbjct: 380 SVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKC 439

Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
             +E   RVF  + +KD  SWN+MI GY Q G+  KA E+F KM ES   P+ +T   ++
Sbjct: 440 GSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVL 499

Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
                 G  DE    F+ M     +      +  ++    + G    A  +  +M     
Sbjct: 500 CACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMS---M 556

Query: 497 YPNCVTILSVLPAC 510
            P+ +   S+L AC
Sbjct: 557 QPDAIVWGSLLAAC 570



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 187/402 (46%), Gaps = 48/402 (11%)

Query: 35  NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVF 92
           NG ++EA+ +   +   G +    T  +++ AC   ++I   +++HA +    E   D+ 
Sbjct: 230 NGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLI 289

Query: 93  VKTKLLSVYAKCGCLDDAREVFE-------------------------------DMRERN 121
           +   LL +YAKC  +++AR +F+                               +M  ++
Sbjct: 290 LGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKD 349

Query: 122 LYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHS 181
           + TW+A+I   +++    E + LF L+ ++ ++P  + F  +L AC N  D + G+  HS
Sbjct: 350 VITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHS 409

Query: 182 LVIKLGMSCVRR------VRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
            V+K G            V NS++ +Y+KCG +    R F+ M EKD V+WN+MI GY Q
Sbjct: 410 HVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQ 469

Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVF 294
            G  ++A  +F KM         VT   ++ + +  G  D      + M +  G+ P   
Sbjct: 470 NGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKD 529

Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
            +TCM+    + G   +A +L +EMS   + P+ +   S ++AC   + + +G     + 
Sbjct: 530 HYTCMVDLLGRAGYLEEAKNLIEEMS---MQPDAIVWGSLLAACKVHRNIQLG---EYVV 583

Query: 355 VKMGFTDDVLVGNSLI--NMYSKCEELEAAERVFDMIKDKDV 394
            K+   D    G  ++  NMY++  + +   RV  +++ + V
Sbjct: 584 KKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGV 625



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 39/259 (15%)

Query: 486 GVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTY 545
           G+ + ++    + +      +L  CA   ++     +H C+++    S   + N LID Y
Sbjct: 5   GLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVY 64

Query: 546 AKSGNIVYSRTIFDGMSSKDIITWNSLIC------------------------------- 574
            K G +  +R +FD M  ++I +WNS+IC                               
Sbjct: 65  GKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMIS 124

Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD--LGKKVFCSITECYQ 632
           G+  HG +  AL  F QM   G   N  +F S + A   AG+ D  LG ++  S+     
Sbjct: 125 GFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSA--CAGLQDLKLGSQIH-SLVYRSN 181

Query: 633 IIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAI 692
            +  +   SA++D+Y + G++E A    ++M +    S W +L+T    +G +D A+   
Sbjct: 182 YLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVS-WNSLITCYEQNGPVDEALKIF 240

Query: 693 ERLFD--LEPGDVLIQRLI 709
             +    +EP +V +  ++
Sbjct: 241 VEMIKCGVEPDEVTLASVV 259


>gi|357518907|ref|XP_003629742.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523764|gb|AET04218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 616

 Score =  313 bits (801), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 191/588 (32%), Positives = 311/588 (52%), Gaps = 54/588 (9%)

Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
           +P+ F ++ +I  +A+NG    ++ L+  M    V P   T ++  S    LK  ++G +
Sbjct: 74  SPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSL---LKNPSLGSQ 130

Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
           +H  A   GF +D+ VGN++I+M                               Y + G 
Sbjct: 131 LHLHAFLFGFVNDLYVGNTIIHM-------------------------------YVKFGV 159

Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
              A ++F +M   DV    +TW  LI  Y ++G+ D A +LF  +   D V     +W 
Sbjct: 160 LDCARKVFDEMPHRDV----VTWTELIVAYARSGDMDSACELFVGLPVKDMV-----AWT 210

Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNK---VKEIHGCV 526
           S++ GY Q      AL  FRKM+ +    + +T++  + ACA L  S     ++EI    
Sbjct: 211 SMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWIREIAESS 270

Query: 527 LRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAAL 586
            R    S++ V ++LID Y+K GN+  +  +F GM   ++ +++S+I G+ +HG   +A+
Sbjct: 271 -RFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAI 329

Query: 587 DLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDL 646
            LF +M   G+KPN  TF+ +  A S AGMV+ G+++F ++ ECY + P  +HY+ M DL
Sbjct: 330 KLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADL 389

Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
            GR+G LE+A++ ++ MP+EP+  +W ALL A  IHGN D+A +A   LF+LEP ++   
Sbjct: 390 LGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFELEPDNLGNY 449

Query: 707 RLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKN-LVYTFVTGGWSESYSDLL 765
            L+ + YA+  K +D  +VRKL RE   R + G  W+E KN +++ F  G       + +
Sbjct: 450 LLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDVKHPEINEI 509

Query: 766 YSWLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIR 820
              L ++ + +        L      I++E K  +   HSEKLALA+ L+ S+ A  TI+
Sbjct: 510 KKALDDLLQRLKCTGYQPKLNSVPYDIDDEGKRCLLVSHSEKLALAYGLL-STDAGSTIK 568

Query: 821 IVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
           I+KN+R+C  CH      S +   +I + D+   HHF NG CSC ++W
Sbjct: 569 IMKNLRICEDCHIVMCGASKLTGRKIIVRDNMRFHHFLNGACSCNNFW 616



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 185/422 (43%), Gaps = 69/422 (16%)

Query: 40  EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIH----LARKLHAFLNLVTEIDVFVKT 95
           EA+ +++S  T     ++      L A I  N++H    +   L  F+  +  I V    
Sbjct: 12  EAVRIIESHCTTLNHAKQ------LHAHIYRNNLHQSSYVITNLLRFITTLPHIPVHTYP 65

Query: 96  KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
            LL               F  +   N + +SA+I AY+R+  +   + L+  M+ + + P
Sbjct: 66  HLL---------------FSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSP 110

Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
             F F  +     N      G  +H      G      V N+++ +YVK G L       
Sbjct: 111 VSFTFSALFSLLKNP---SLGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVL------- 160

Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
                                   D A ++FD+M   +    VVT+  LI +Y + G  D
Sbjct: 161 ------------------------DCARKVFDEMPHRD----VVTWTELIVAYARSGDMD 192

Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
            A E+   +       D+  WT M++G++QN    +AL  F++M   GV+ + +T+  AI
Sbjct: 193 SACELFVGLP----VKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGAI 248

Query: 336 SACTDLKALAMGMEIHSLA--VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD 393
           SAC  L        I  +A   + G   +V VG++LI+MYSKC  +E A  VF  +K+ +
Sbjct: 249 SACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMN 308

Query: 394 VYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQ 453
           V+S++SMI G+   G    A +LF +M E+ + PN +T+  L +     G  ++   LF 
Sbjct: 309 VFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFG 368

Query: 454 RM 455
            M
Sbjct: 369 AM 370



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 146/357 (40%), Gaps = 50/357 (14%)

Query: 9   FQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTY---INLLQ 65
           F Q+HS      NP      +     NG  + +I +  S+          T+    +LL+
Sbjct: 69  FSQVHS-----PNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLK 123

Query: 66  ACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTW 125
                + +HL   L  F+N     D++V   ++ +Y K G LD AR+VF++M  R++ TW
Sbjct: 124 NPSLGSQLHLHAFLFGFVN-----DLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTW 178

Query: 126 SAMIGAYSRDQRWREVVELFF-LMVQD------------------------------GLF 154
           + +I AY+R        ELF  L V+D                              G+ 
Sbjct: 179 TELIVAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVV 238

Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLV--IKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
            D+      + AC   G       +  +    + G      V ++++ +Y KCG +  A 
Sbjct: 239 TDEITLVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAY 298

Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
             F+ M E +  +++SMI G+   G    A +LF +M    IK   VTF  L  + +  G
Sbjct: 299 NVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAG 358

Query: 273 QCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
             +   ++   M E  G++P    + CM     + G   +AL L + M    + PNG
Sbjct: 359 MVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMP---MEPNG 412



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 2/155 (1%)

Query: 90  DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
           +VFV + L+ +Y+KCG +++A  VF+ M+E N++++S+MI  ++   R R  ++LF+ M+
Sbjct: 277 NVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSSMIVGFAVHGRARSAIKLFYEML 336

Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
           ++G+ P+   F  +  AC + G  E G +L  ++    G+S        +  +  + G L
Sbjct: 337 ENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHL 396

Query: 209 IWARRFFESMD-EKDGVAWNSMISGYFQIGENDEA 242
             A +  ++M  E +G  W +++      G  D A
Sbjct: 397 EKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVA 431


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.137    0.424 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,400,760,992
Number of Sequences: 23463169
Number of extensions: 556569967
Number of successful extensions: 1988563
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 11506
Number of HSP's successfully gapped in prelim test: 1593
Number of HSP's that attempted gapping in prelim test: 1614919
Number of HSP's gapped (non-prelim): 97003
length of query: 868
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 716
effective length of database: 8,792,793,679
effective search space: 6295640274164
effective search space used: 6295640274164
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 82 (36.2 bits)