BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047992
(868 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FXH1|PPR52_ARATH Pentatricopeptide repeat-containing protein At1g19720
OS=Arabidopsis thaliana GN=DYW7 PE=2 SV=1
Length = 894
Score = 1070 bits (2768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/856 (60%), Positives = 652/856 (76%), Gaps = 3/856 (0%)
Query: 16 LTKKSNPRF-RDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIH 74
TKK P D D+LC NG L EA LDS+ QG+KV+R+TY+ LL++CIDS SIH
Sbjct: 39 FTKKKEPNIIPDEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIH 98
Query: 75 LARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
L R LHA L TE DVFV+TKLLS+YAKCGC+ DAR+VF+ MRERNL+TWSAMIGAYSR
Sbjct: 99 LGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSR 158
Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
+ RWREV +LF LM++DG+ PDDFLFPKILQ C NCGD EAGK++HS+VIKLGMS RV
Sbjct: 159 ENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRV 218
Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEI 254
NS+LAVY KCG+L +A +FF M E+D +AWNS++ Y Q G+++EA L +M +E I
Sbjct: 219 SNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGI 278
Query: 255 KLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALD 314
G+VT+NILI YNQLG+CD AM+++++ME+ GIT DVFTWT MISG NG QALD
Sbjct: 279 SPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALD 338
Query: 315 LFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
+F++M GV+PN VTI SA+SAC+ LK + G E+HS+AVKMGF DDVLVGNSL++MYS
Sbjct: 339 MFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYS 398
Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
KC +LE A +VFD +K+KDVY+WNSMI GYCQAGYCGKAYELF +MQ++++ PN+ITWN
Sbjct: 399 KCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNT 458
Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
+ISGYI+NG+E EA+DLFQRM K+ KV+RNTA+WN +IAGY Q G+K+ AL +FRKMQ S
Sbjct: 459 MISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFS 518
Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
F PN VTILS+LPACA L+ + V+EIHGCVLRR+L++ V N+L DTYAKSG+I YS
Sbjct: 519 RFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYS 578
Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
RTIF GM +KDIITWNSLI GYVLHG + AL LF+QMK+ G+ PNRGT SIILAH L
Sbjct: 579 RTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLM 638
Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
G VD GKKVF SI Y IIP +EH SAM+ LYGR+ +LEEA++FI++M I+ ++ IWE+
Sbjct: 639 GNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWES 698
Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
LT CRIHG+ID+A+ A E LF LEP + + ++ QIYA+ K +L+ K R+N
Sbjct: 699 FLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLL 758
Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSG-LCIEEEEKE 793
+ GQ WIEV+NL++TF TG S+ +D+LY ++ + ++G L IEEE +E
Sbjct: 759 KKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGELWIEEEGRE 818
Query: 794 EISGIHSEKLALAFALIGSSQAPH-TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
E GIHSEK A+AF LI SS A TIRI+KN+RMC CH+TAKYVS + C+I L D++
Sbjct: 819 ETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTR 878
Query: 853 CLHHFKNGQCSCGDYW 868
CLHHFKNG CSC DYW
Sbjct: 879 CLHHFKNGDCSCKDYW 894
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust.
Identities = 289/896 (32%), Positives = 461/896 (51%), Gaps = 105/896 (11%)
Query: 63 LLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
LLQA I + RK+H ++ T + D + T+++++YA CG DD+R VF+ +R +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLM 179
NL+ W+A+I +YSR++ + EV+E F M+ L PD F +P +++AC D G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
H LV+K G+ V N++++ Y G + A + F+ M E++ V+WNSMI + G +
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFS 269
Query: 240 DEAHRLFDKMCRE------------------------EIKLG---------------VVT 260
+E+ L +M E EI LG +V
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 261 FNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
N L+ Y++ G C +M+ +M + +V +W M+ GF+ G T D+ ++M
Sbjct: 330 NNALMDMYSKCG-CITNAQMIFKMNN---NKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 321 FVG--VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
G V + VTI +A+ C L E+H ++K F + LV N+ + Y+KC
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
L A+RVF I+ K V SWN++I G+ Q+ + + ++M+ S + P+ T L+S
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 439 -----------------------------------YIQNGNEDEAVDLFQRMGKNDKVKR 463
YI G LF M DK
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM--EDK--- 560
Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
+ SWN++I GY Q G + ALGVFR+M ++++ V AC+ L + +E H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620
Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
L+ LE + SLID YAK+G+I S +F+G+ K +WN++I GY +HG
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680
Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
A+ LF++M+ G P+ TFL ++ A + +G++ G + + + + P ++HY+ +
Sbjct: 681 EAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 740
Query: 644 IDLYGRSGKLEEAMEFI-EDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
ID+ GR+G+L++A+ + E+M E D IW++LL++CRIH N+++ +LF+LEP
Sbjct: 741 IDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK 800
Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG-----GW 757
L+ +YA GK ED KVR+ E + R G WIE+ V++FV G G+
Sbjct: 801 PENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGF 860
Query: 758 SE-----SYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGS 812
E S ++ S + P+ ++ + S EEE+ E++ G HSEKLAL + LI +
Sbjct: 861 EEIKSLWSILEMKISKMGYRPDTMSVQHDLS----EEEKIEQLRG-HSEKLALTYGLIKT 915
Query: 813 SQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
S+ TIR+ KN+R+CV CH AK +S + EI + D+K HHFKNG CSCGDYW
Sbjct: 916 SEGT-TIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 190 bits (482), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 154/649 (23%), Positives = 284/649 (43%), Gaps = 107/649 (16%)
Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPK-----ILQACGNCGDFEAGKLMHSLVIKLGMS 189
D+ +R V E + D D FL + +LQA G D E G+ +H LV S
Sbjct: 60 DKSFRTVQEF---VGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLV-----S 111
Query: 190 CVRRVRNS------VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
R+RN ++ +Y CG +R F+++ K+ WN++IS Y + DE
Sbjct: 112 GSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVL 171
Query: 244 RLFDKM-CREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISG 302
F +M ++ T+ +I++ + + + + + G+ DVF ++S
Sbjct: 172 ETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSF 231
Query: 303 FAQNGRTSQALDLF-----------------------KEMSFV------------GVMPN 327
+ +G + AL LF E SF+ MP+
Sbjct: 232 YGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPD 291
Query: 328 GVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD 387
T+ + + C + + +G +H AVK+ ++++ N+L++MYSKC + A+ +F
Sbjct: 292 VATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK 351
Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM----------------------QESDV 425
M +K+V SWN+M+ G+ G +++ +M ES +
Sbjct: 352 MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Query: 426 PP---------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
P N + N ++ Y + G+ A +F + + SWN+
Sbjct: 412 PSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIR-----SKTVNSWNA 466
Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
LI G+ Q +L +M+ S P+ T+ S+L AC+ L + KE+HG ++R
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
LE L V S++ Y G + + +FD M K +++WN++I GY+ +GF AL +F
Sbjct: 527 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586
Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS----AMIDL 646
QM +G++ + + + A SL + LG++ Y + ++E + ++ID+
Sbjct: 587 QMVLYGIQLCGISMMPVFGACSLLPSLRLGRE-----AHAYALKHLLEDDAFIACSLIDM 641
Query: 647 YGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
Y ++G + ++ + + E ++ W A++ IHG A+ E +
Sbjct: 642 YAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIHGLAKEAIKLFEEM 689
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 223/490 (45%), Gaps = 59/490 (12%)
Query: 59 TYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
T + +L C I L + +H + + L + ++ + L+ +Y+KCGC+ +A+ +F+
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG--LFPDDFLFPKILQACGNCGDFEA 175
+N+ +W+ M+G +S + ++ M+ G + D+ + C + +
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 413
Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
K +H +K V N+ +A Y KCG L +A+R F + K +WN++I G+ Q
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 236 IGEND-----EAHRLFD---------KMCR--------EEIKLGVVTFNILIRS------ 267
ND +AH +C + ++LG +IR+
Sbjct: 474 --SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL 531
Query: 268 ---------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
Y G+ + ME + +W +I+G+ QNG +AL +F++
Sbjct: 532 FVYLSVLSLYIHCGELCTVQALFDAMED----KSLVSWNTVITGYLQNGFPDRALGVFRQ 587
Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
M G+ G+++ AC+ L +L +G E H+ A+K DD + SLI+MY+K
Sbjct: 588 MVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGS 647
Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
+ + +VF+ +K+K SWN+MI GY G +A +LF +MQ + P+ +T+ +++
Sbjct: 648 ITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTA 707
Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL------------- 485
+G E + +M + +K N + +I + GQ + AL
Sbjct: 708 CNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADV 767
Query: 486 GVFRKMQSSC 495
G+++ + SSC
Sbjct: 768 GIWKSLLSSC 777
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/492 (23%), Positives = 214/492 (43%), Gaps = 56/492 (11%)
Query: 26 DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRN--TYINLLQACIDSNSIHLARKLHAFL 83
+T + G + VL + G V+ + T +N + C + + ++LH +
Sbjct: 362 NTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY- 420
Query: 84 NLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
+L E + V ++ YAKCG L A+ VF +R + + +W+A+IG +++ R
Sbjct: 421 SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 480
Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
++ M GL PD F +L AC GK +H +I+ + V SVL++
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSL 540
Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
Y+ CG+L + F++M++K V+WN++I+GY Q G D A +F +M I+L ++
Sbjct: 541 YIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISM 600
Query: 262 NILIRSYNQLGQCDVAME----------------------MVKRMESLGITPDVF----- 294
+ + + L + E M + S+ + VF
Sbjct: 601 MPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKE 660
Query: 295 ----TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME- 349
+W MI G+ +G +A+ LF+EM G P+ +T ++AC + G+
Sbjct: 661 KSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRY 720
Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF--DMIKDKDVYSWNSMIAGYCQ- 406
+ + G ++ +I+M + +L+ A RV +M ++ DV W S+++ C+
Sbjct: 721 LDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS-CRI 779
Query: 407 -------AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
K +EL E + P N + + L +G G ++ + QRM +
Sbjct: 780 HQNLEMGEKVAAKLFEL-----EPEKPENYVLLSNLYAGL---GKWEDVRKVRQRMNEMS 831
Query: 460 KVKRNTASWNSL 471
K SW L
Sbjct: 832 LRKDAGCSWIEL 843
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 138/296 (46%), Gaps = 16/296 (5%)
Query: 6 LTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQ 65
L T Q L + KS + +L NG + A+ V + G ++ + + +
Sbjct: 547 LCTVQALFDAMEDKSLVSWNTVITGYL-QNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605
Query: 66 ACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYT 124
AC S+ L R+ HA+ L + E D F+ L+ +YAK G + + +VF ++E++ +
Sbjct: 606 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 665
Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG-KLMHSLV 183
W+AMI Y +E ++LF M + G PDD F +L AC + G G + + +
Sbjct: 666 WNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMK 725
Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF-ESMDEKDGVA-WNSMISG-----YFQI 236
G+ + V+ + + G+L A R E M E+ V W S++S ++
Sbjct: 726 SSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEM 785
Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
GE A +LF+ + E+ + V+ N+ Y LG+ + ++ +RM + + D
Sbjct: 786 GEKVAA-KLFE-LEPEKPENYVLLSNL----YAGLGKWEDVRKVRQRMNEMSLRKD 835
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 254/784 (32%), Positives = 410/784 (52%), Gaps = 42/784 (5%)
Query: 90 DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
D V + + Y +C L A ++F++M +R+ W+ ++ R W + VELF M
Sbjct: 22 DTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQ 81
Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
G D K+LQ C N F G+ +H V++LG+ + NS++ +Y + GKL
Sbjct: 82 FSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLE 141
Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
+R+ F SM +++ +WNS++S SY
Sbjct: 142 LSRKVFNSMKDRNLSSWNSILS-----------------------------------SYT 166
Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
+LG D A+ ++ ME G+ PD+ TW ++SG+A G + A+ + K M G+ P+
Sbjct: 167 KLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTS 226
Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
+I+S + A + L +G IH ++ DV V +LI+MY K L A VFDM+
Sbjct: 227 SISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM 286
Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
K++ +WNS+++G A A L I+M++ + P+ ITWN L SGY G ++A+
Sbjct: 287 DAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKAL 346
Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
D+ +M K V N SW ++ +G + G NAL VF KMQ PN T+ ++L
Sbjct: 347 DVIGKM-KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKI 405
Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
L + KE+HG LR++L V +L+D Y KSG++ + IF G+ +K + +W
Sbjct: 406 LGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASW 465
Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
N ++ GY + G + F M G++P+ TF S++ +G+V G K F +
Sbjct: 466 NCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRS 525
Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
Y IIP IEH S M+DL GRSG L+EA +FI+ M ++PD++IW A L++C+IH +++LA
Sbjct: 526 RYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAE 585
Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLV 749
+A +RL LEP + +++ +Y+ + ED ++R L R N R WI++ V
Sbjct: 586 IAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTV 645
Query: 750 YTFVTGGWSES-YSDLLYSWLQNVPENVTARSSHSGLCIEEE----EKEEISGIHSEKLA 804
+ F G + D+ + + V E + CI ++ EKE++ H+EKLA
Sbjct: 646 HIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLA 705
Query: 805 LAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
+ + LI + IR+VKN +C H AKY+S++ + EI L + +HHF++G+CSC
Sbjct: 706 MTYGLI-KKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSC 764
Query: 865 GDYW 868
D W
Sbjct: 765 NDSW 768
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 224/450 (49%), Gaps = 41/450 (9%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
+G +A+ + + GAK +T + LLQ C + R++H + L L E +V +
Sbjct: 67 SGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSM 126
Query: 94 KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR-----------DQ------ 136
L+ +Y++ G L+ +R+VF M++RNL +W++++ +Y++ D+
Sbjct: 127 CNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGL 186
Query: 137 -----RW-------------REVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
W ++ + + M GL P +LQA G + GK
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKA 246
Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
+H +++ + V +++ +Y+K G L +AR F+ MD K+ VAWNS++SG
Sbjct: 247 IHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACL 306
Query: 239 NDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
+A L +M +E IK +T+N L Y LG+ + A++++ +M+ G+ P+V +WT
Sbjct: 307 LKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTA 366
Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
+ SG ++NG AL +F +M GV PN T+++ + L L G E+H ++
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
D V +L++MY K +L++A +F IK+K + SWN M+ GY G + F
Sbjct: 427 LICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFS 486
Query: 419 KMQESDVPPNVITWNVLI-----SGYIQNG 443
M E+ + P+ IT+ ++ SG +Q G
Sbjct: 487 VMLEAGMEPDAITFTSVLSVCKNSGLVQEG 516
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 107/209 (51%), Gaps = 6/209 (2%)
Query: 522 IHGCVLRRSLESS-LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHG 580
IHG +++R L++S V+++ + Y + ++ ++ +FD M +D + WN ++ + G
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 581 FWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHY 640
W A++LF +M+ G K T + ++ S G+++ + + +
Sbjct: 69 NWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRL-GLESNVSMC 127
Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL--FDL 698
+++I +Y R+GKLE + + M + + S W ++L++ G +D A+ ++ + L
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGL 186
Query: 699 EPGDVLIQRLILQIYAICGKPEDALKVRK 727
+P D++ +L YA G +DA+ V K
Sbjct: 187 KP-DIVTWNSLLSGYASKGLSKDAIAVLK 214
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 429 bits (1103), Expect = e-119, Method: Compositional matrix adjust.
Identities = 268/803 (33%), Positives = 419/803 (52%), Gaps = 94/803 (11%)
Query: 76 ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
ARKL + L T F +LS Y+K G +D E F+ + +R+ +W+ MI Y
Sbjct: 68 ARKLFDEMPLRT---AFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNI 124
Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
++ + + + MV++G+ P F +L + E GK +HS ++KLG+ V
Sbjct: 125 GQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184
Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
NS+L +Y KCG + A+ +FD+M +I
Sbjct: 185 NSLLNMYAKCGDPMMAKF-------------------------------VFDRMVVRDIS 213
Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
++N +I + Q+GQ D+AM ++M D+ TW MISGF Q G +ALD+
Sbjct: 214 ----SWNAMIALHMQVGQMDLAMAQFEQMAE----RDIVTWNSMISGFNQRGYDLRALDI 265
Query: 316 FKEMSFVGVM-PNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYS 374
F +M ++ P+ T+ S +SAC +L+ L +G +IHS V GF +V N+LI+MYS
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 375 KCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
+C +E A R+ + KD+ I G+
Sbjct: 326 RCGGVETARRLIEQRGTKDL-----KIEGF----------------------------TA 352
Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
L+ GYI+ G+ ++A ++F + D V +W ++I GY+Q G A+ +FR M
Sbjct: 353 LLDGYIKLGDMNQAKNIFVSLKDRDVV-----AWTAMIVGYEQHGSYGEAINLFRSMVGG 407
Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
PN T+ ++L + L + + K+IHG ++ S+ V N+LI YAK+GNI +
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSA 467
Query: 555 RTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSL 613
FD + +D ++W S+I HG AL+LF+ M GL+P+ T++ + A +
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH 527
Query: 614 AGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
AG+V+ G++ F + + +IIP + HY+ M+DL+GR+G L+EA EFIE MPIEPD W
Sbjct: 528 AGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWG 587
Query: 674 ALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENT 733
+LL+ACR+H NIDL +A ERL LEP + + +Y+ CGK E+A K+RK ++
Sbjct: 588 SLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGR 647
Query: 734 RRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--------TARSSHSGL 785
+ G WIEVK+ V+ F + + +Y ++ + + + TA H
Sbjct: 648 VKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHD-- 705
Query: 786 CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCE 845
+EEE KE+I HSEKLA+AF LI S+ T+RI+KN+R+C CH K++S + E
Sbjct: 706 -LEEEVKEQILRHHSEKLAIAFGLI-STPDKTTLRIMKNLRVCNDCHTAIKFISKLVGRE 763
Query: 846 IFLADSKCLHHFKNGQCSCGDYW 868
I + D+ HHFK+G CSC DYW
Sbjct: 764 IIVRDTTRFHHFKDGFCSCRDYW 786
Score = 163 bits (412), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 133/511 (26%), Positives = 226/511 (44%), Gaps = 78/511 (15%)
Query: 36 GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
G+ ++AI V+ + +G + + T N+L + + + +K+H+F+ L +V V
Sbjct: 125 GQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184
Query: 95 TKLLSVYAKC-------------------------------GCLDDAREVFEDMRERNLY 123
LL++YAKC G +D A FE M ER++
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 124 TWSAMIGAYSRDQRWREVVELFFLMVQDGLF-PDDFLFPKILQACGNCGDFEAGKLMHSL 182
TW++MI +++ +++F M++D L PD F +L AC N GK +HS
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH 304
Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV--AWNSMISGYFQIGEND 240
++ G V N+++++Y +CG + ARR E KD + +++ GY ++G+ +
Sbjct: 305 IVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMN 364
Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
+A +F + + VV + +I Y Q G A+ + + M+
Sbjct: 365 QAKNIFVSLKDRD----VVAWTAMIVGYEQHGSYGEAINLFR---------------SMV 405
Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
G G PN T+ + +S + L +L+ G +IH AVK G
Sbjct: 406 GG--------------------GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445
Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIK-DKDVYSWNSMIAGYCQAGYCGKAYELFIK 419
V V N+LI MY+K + +A R FD+I+ ++D SW SMI Q G+ +A ELF
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 420 MQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLG 479
M + P+ IT+ + S G ++ F M DK+ + + ++ + + G
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565
Query: 480 QKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
A KM P+ VT S+L AC
Sbjct: 566 LLQEAQEFIEKMP---IEPDVVTWGSLLSAC 593
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 108/237 (45%), Gaps = 41/237 (17%)
Query: 498 PNCVTILSVLPACAYLVASNKVKE--------IHGCVLRRSLESSLPVMNSLIDTYAKSG 549
P +++ ++L C L+ + K +H V++ L S+ +MN+L++ Y+K+G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 550 NIVYSRTIFDGM-------------------------------SSKDIITWNSLICGYVL 578
+++R +FD M +D ++W ++I GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
G +H A+ + M G++P + T +++ + + ++ GKKV I + + +
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKL-GLRGNVS 182
Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
++++++Y + G A +F+ D + D S W A++ G +DLA+ E++
Sbjct: 183 VSNSLLNMYAKCGDPMMA-KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM 238
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 32 LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDV 91
L +G EA+ + +++ +G + TY+ + AC + ++ R+ + +++ ++D
Sbjct: 490 LAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ---YFDMMKDVDK 546
Query: 92 FVKTK-----LLSVYAKCGCLDDAREVFEDMR-ERNLYTWSAMIGA 131
+ T ++ ++ + G L +A+E E M E ++ TW +++ A
Sbjct: 547 IIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust.
Identities = 250/769 (32%), Positives = 406/769 (52%), Gaps = 76/769 (9%)
Query: 170 CGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSM 229
C + + + LV K G+ + +++++ + G + A R FE +D K V +++M
Sbjct: 47 CSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTM 106
Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
+ G+ ++ + D+A + F +M ++++ V F L++ + V E+ + G
Sbjct: 107 LKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGF 166
Query: 290 TPDVF-------------------------------TWTCMISGFAQNGRTSQALDLFKE 318
+ D+F +W +++G++QNG AL++ K
Sbjct: 167 SLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKS 226
Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEE 378
M + P+ +TI S + A + L+ +++G EIH A++ GF V + +L++MY+KC
Sbjct: 227 MCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGS 286
Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP----------- 427
LE A ++FD + +++V SWNSMI Y Q +A +F KM + V P
Sbjct: 287 LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHA 346
Query: 428 ------------------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
NV N LIS Y + D A +F ++ R
Sbjct: 347 CADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS-----R 401
Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
SWN++I G+ Q G+ +AL F +M+S P+ T +SV+ A A L ++ K IH
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIH 461
Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
G V+R L+ ++ V +L+D YAK G I+ +R IFD MS + + TWN++I GY HGF
Sbjct: 462 GVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGK 521
Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
AAL+LF++M+ +KPN TFLS+I A S +G+V+ G K F + E Y I ++HY AM
Sbjct: 522 AALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAM 581
Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
+DL GR+G+L EA +FI MP++P +++ A+L AC+IH N++ A A ERLF+L P D
Sbjct: 582 VDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDG 641
Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
L+ IY E +VR R + G +E+KN V++F +G + S
Sbjct: 642 GYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSK 701
Query: 764 LLYSWLQ----NVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTI 819
+Y++L+ ++ E ++ L +E + KE++ HSEKLA++F L+ ++ A TI
Sbjct: 702 KIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLSTHSEKLAISFGLLNTT-AGTTI 760
Query: 820 RIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
+ KN+R+C CH KY+S++ EI + D + HHFKNG CSCGDYW
Sbjct: 761 HVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/461 (28%), Positives = 223/461 (48%), Gaps = 40/461 (8%)
Query: 60 YINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
+ LL+ C D + + +++H L +D+F T L ++YAKC +++AR+VF+ M
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
ER+L +W+ ++ YS++ R +E+ M ++ L P +L A GK
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE 257
Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
+H ++ G + + +++ +Y KCG L AR+ F+ M E++ V+WNSMI Y Q
Sbjct: 258 IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNEN 317
Query: 239 NDEAHRLFDKMCREEIK---------------LG--------------------VVTFNI 263
EA +F KM E +K LG V N
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNS 377
Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
LI Y + + D A M +++S + +W MI GFAQNGR AL+ F +M
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLV----SWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
V P+ T S I+A +L IH + ++ +V V +L++MY+KC + A
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIAR 493
Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
+FDM+ ++ V +WN+MI GY G+ A ELF +MQ+ + PN +T+ +IS +G
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553
Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
+ + F M +N ++ + + +++ + G+ N A
Sbjct: 554 LVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEA 594
Score = 210 bits (535), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 142/527 (26%), Positives = 247/527 (46%), Gaps = 72/527 (13%)
Query: 92 FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
F +TKL+S++ + G +D+A VFE + + + M+ +++ + ++ F M D
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
+ P + F +L+ CG+ + GK +H L++K G S + +Y KC ++ A
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF---------- 261
R+ F+ M E+D V+WN++++GY Q G A + MC E +K +T
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 262 ----------------------NI---LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
NI L+ Y + G + A ++ M + +V +W
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM----LERNVVSW 305
Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
MI + QN +A+ +F++M GV P V++ A+ AC DL L G IH L+V+
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
+G +V V NSLI+MY KC+E++ A +F ++ + + SWN+MI G+ Q G A
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425
Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEA----------------------VDLFQR 454
F +M+ V P+ T+ +I+ + A VD++ +
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Query: 455 MGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
G + +R+ +WN++I GY G AL +F +MQ PN VT LSV
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSV 545
Query: 507 LPACAY--LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI 551
+ AC++ LV + +K + S+E S+ +++D ++G +
Sbjct: 546 ISACSHSGLVEAG-LKCFYMMKENYSIELSMDHYGAMVDLLGRAGRL 591
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 210/445 (47%), Gaps = 53/445 (11%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID--VF 92
NG A+ ++ S+ + K T +++L A I + +++H + + + D V
Sbjct: 214 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYA-MRSGFDSLVN 272
Query: 93 VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
+ T L+ +YAKCG L+ AR++F+ M ERN+ +W++MI AY +++ +E + +F M+ +G
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
+ P D L AC + GD E G+ +H L ++LG+ V NS++++Y KC ++ A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 392
Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
F + + V+WN+MI G+ Q G +A F +M +K T+ +I + +L
Sbjct: 393 SMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELS 452
Query: 273 QCDVA----------------------MEMVKRMESLGITPDVF---------TWTCMIS 301
A ++M + ++ I +F TW MI
Sbjct: 453 ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMID 512
Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD-------LKALAMGMEIHSLA 354
G+ +G AL+LF+EM + PNGVT S ISAC+ LK M E +S+
Sbjct: 513 GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIE 572
Query: 355 VKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQ----AGY 409
+ M +++++ + L EA + + M V + +M+ G CQ +
Sbjct: 573 LSMDHY------GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAML-GACQIHKNVNF 625
Query: 410 CGKAYELFIKMQESDVPPNVITWNV 434
KA E ++ D +V+ N+
Sbjct: 626 AEKAAERLFELNPDDGGYHVLLANI 650
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 151/320 (47%), Gaps = 15/320 (4%)
Query: 26 DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LN 84
++ +D N EA+ + + +G K + + L AC D + R +H +
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 85 LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
L + +V V L+S+Y KC +D A +F ++ R L +W+AMI ++++ R + +
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNY 425
Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR---VRNSVLAV 201
F M + PD F + ++ A K +H +V++ SC+ + V +++ +
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMR---SCLDKNVFVTTALVDM 482
Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
Y KCG ++ AR F+ M E+ WN+MI GY G A LF++M + IK VTF
Sbjct: 483 YAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTF 542
Query: 262 NILIRSYNQLGQCDVAME---MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
+I + + G + ++ M+K S+ ++ D + M+ + GR ++A D +
Sbjct: 543 LSVISACSHSGLVEAGLKCFYMMKENYSIELSMD--HYGAMVDLLGRAGRLNEAWDFIMQ 600
Query: 319 MSFVGVMPNGVTITSAISAC 338
M V P + + AC
Sbjct: 601 MP---VKPAVNVYGAMLGAC 617
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 245/785 (31%), Positives = 415/785 (52%), Gaps = 79/785 (10%)
Query: 90 DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
D ++ KL++ Y+ C +DA V + + + +Y++S++I A ++ + + + + +F M
Sbjct: 49 DGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMF 108
Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
GL PD + P + + C F+ GK +H + G+ V+ S+ +Y++CG++
Sbjct: 109 SHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRM- 167
Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
+A ++FD+M ++ VVT + L+ +Y
Sbjct: 168 ------------------------------GDARKVFDRMSDKD----VVTCSALLCAYA 193
Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
+ G + + ++ MES GI ++ +W ++SGF ++G +A+ +F+++ +G P+ V
Sbjct: 194 RKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQV 253
Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
T++S + + D + L MG IH +K G D V +++I+MY K + +F+
Sbjct: 254 TVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFN-- 311
Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAV 449
+ M AG C N I+G +NG D+A+
Sbjct: 312 ------QFEMMEAGVC---------------------------NAYITGLSRNGLVDKAL 338
Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
++F+ + K ++ N SW S+IAG Q G+ AL +FR+MQ + PN VTI S+LPA
Sbjct: 339 EMFE-LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPA 397
Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
C + A + HG +R L ++ V ++LID YAK G I S+ +F+ M +K+++ W
Sbjct: 398 CGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCW 457
Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITE 629
NSL+ G+ +HG + +F+ + LKP+ +F S++ A G+ D G K F ++E
Sbjct: 458 NSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSE 517
Query: 630 CYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAV 689
Y I P +EHYS M++L GR+GKL+EA + I++MP EPDS +W ALL +CR+ N+DLA
Sbjct: 518 EYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAE 577
Query: 690 LAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR-KLERENTRRNSFGQCWIEVKNL 748
+A E+LF LEP + L+ IYA G + +R K+E ++N G WI+VKN
Sbjct: 578 IAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNP-GCSWIQVKNR 636
Query: 749 VYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGL-----CIEEEEKEEISGIHSEKL 803
VYT + G S D + + + + + L +EE+E+E++ HSEKL
Sbjct: 637 VYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKL 696
Query: 804 ALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCS 863
A+ F L+ + ++++KN+R+C CH K++S EIF+ D+ HHFK+G CS
Sbjct: 697 AVVFGLLNTPDGT-PLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICS 755
Query: 864 CGDYW 868
CGD+W
Sbjct: 756 CGDFW 760
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 151/572 (26%), Positives = 269/572 (47%), Gaps = 48/572 (8%)
Query: 38 LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT--EIDVFVKT 95
++I V + + G + NL + C + ++ + +++H ++ V+ ++D FV+
Sbjct: 97 FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHC-VSCVSGLDMDAFVQG 155
Query: 96 KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
+ +Y +CG + DAR+VF+ M ++++ T SA++ AY+R EVV + M G+
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL-----AVYVKCGKLIW 210
+ + IL G + +M + LG + +SVL + + G+LI
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
+ + KD ++MI Y + G LF++ E ++ GV N I ++
Sbjct: 276 GYVIKQGL-LKDKCVISAMIDMYGKSGHVYGIISLFNQF--EMMEAGVC--NAYITGLSR 330
Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
G D A+EM + + + +V +WT +I+G AQNG+ +AL+LF+EM GV PN VT
Sbjct: 331 NGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVT 390
Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
I S + AC ++ AL G H AV++ D+V VG++LI+MY+KC + ++ VF+M+
Sbjct: 391 IPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP 450
Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
K++ WNS++ G+ G + +F + + + P+ I++ L+S Q G DE
Sbjct: 451 TKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK 510
Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
F+ M + +K ++ ++ + G+ A + ++M F P+ ++L +C
Sbjct: 511 YFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMP---FEPDSCVWGALLNSC 567
Query: 511 AYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWN 570
L + + EI L LE P TY NI
Sbjct: 568 R-LQNNVDLAEIAAEKLFH-LEPENP------GTYVLLSNI------------------- 600
Query: 571 SLICGYVLHGFWHAALDLFDQMKSFGLKPNRG 602
Y G W + ++M+S GLK N G
Sbjct: 601 -----YAAKGMWTEVDSIRNKMESLGLKKNPG 627
Score = 79.7 bits (195), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 136/308 (44%), Gaps = 16/308 (5%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFV 93
NG+ EA+ + + G K T ++L AC + ++ R H F V +D V V
Sbjct: 366 NGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHV 425
Query: 94 KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
+ L+ +YAKCG ++ ++ VF M +NL W++++ +S + +EV+ +F +++ L
Sbjct: 426 GSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRL 485
Query: 154 FPDDFLFPKILQACGNCGDFEAG-KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
PD F +L ACG G + G K + + G+ + ++ + + GKL A
Sbjct: 486 KPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAY 545
Query: 213 RFFESMD-EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
+ M E D W ++++ D A +K+ E + T+ +L Y
Sbjct: 546 DLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPE-NPGTYVLLSNIYAAK 604
Query: 272 GQCDVAMEMVKRMESLGITPD-----------VFTWTCMISGFAQNGRTSQALD-LFKEM 319
G + +MESLG+ + V+T Q + ++ +D + KEM
Sbjct: 605 GMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEM 664
Query: 320 SFVGVMPN 327
G PN
Sbjct: 665 RKSGHRPN 672
Score = 33.9 bits (76), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 67/162 (41%), Gaps = 4/162 (2%)
Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
K + H +L+ ++ + LI +Y+ + + + I +++SLI
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
+ ++ +F +M S GL P+ ++ + +GK++ C C + M
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHC--VSCVSGLDMD 150
Query: 638 EHY-SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
+M +Y R G++ +A + + M + D ALL A
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMS-DKDVVTCSALLCA 191
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 415 bits (1066), Expect = e-115, Method: Compositional matrix adjust.
Identities = 270/922 (29%), Positives = 439/922 (47%), Gaps = 103/922 (11%)
Query: 32 LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACID-SNSIHLARKLHA-FLNLVTEI 89
L + E + + ++ T+ +L+AC S + + ++HA L
Sbjct: 161 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD 220
Query: 90 DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
V L+ +Y++ G +D AR VF+ +R ++ +W AMI S+++ E + LF M
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280
Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
G+ P + F +L AC E G+ +H LV+KLG S V N+++++Y G LI
Sbjct: 281 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 340
Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------CR 251
A F +M ++D V +N++I+G Q G ++A LF +M C
Sbjct: 341 SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 400
Query: 252 EE-------------IKLGVVTFN----ILIRSYNQLGQCDVAMEMVKRMESLGITPDVF 294
+ KLG + N L+ Y + + A++ E +V
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETE----VENVV 456
Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
W M+ + + +F++M ++PN T S + C L L +G +IHS
Sbjct: 457 LWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
+K F + V + LI+MY+K +L+ A + KDV SW +MIAGY Q + KA
Sbjct: 517 IKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKAL 576
Query: 415 ELFIKMQE---------------------------------------SDVPPNVITWNVL 435
F +M + SD+P N L
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ----NAL 632
Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
++ Y + G +E+ F++ D + +WN+L++G+QQ G AL VF +M
Sbjct: 633 VTLYSRCGKIEESYLAFEQTEAGDNI-----AWNALVSGFQQSGNNEEALRVFVRMNREG 687
Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
N T S + A + + K++H + + +S V N+LI YAK G+I +
Sbjct: 688 IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAE 747
Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
F +S+K+ ++WN++I Y HGF ALD FDQM ++PN T + ++ A S G
Sbjct: 748 KQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIG 807
Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
+VD G F S+ Y + P EHY ++D+ R+G L A EFI++MPI+PD+ +W L
Sbjct: 808 LVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTL 867
Query: 676 LTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
L+AC +H N+++ A L +LEP D L+ +YA+ K + R+ +E +
Sbjct: 868 LSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVK 927
Query: 736 NSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC--------- 786
GQ WIEVKN +++F G + +D ++ + Q ++T R+S G
Sbjct: 928 KEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQ----DLTKRASEIGYVQDCFSLLNE 983
Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
++ E+K+ I IHSEKLA++F L+ S A I ++KN+R+C CH K+VS + + EI
Sbjct: 984 LQHEQKDPIIFIHSEKLAISFGLL-SLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREI 1042
Query: 847 FLADSKCLHHFKNGQCSCGDYW 868
+ D+ HHF+ G CSC DYW
Sbjct: 1043 IVRDAYRFHHFEGGACSCKDYW 1064
Score = 247 bits (631), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 200/745 (26%), Positives = 337/745 (45%), Gaps = 89/745 (11%)
Query: 22 PRFRDTHLDF--LCGNGRLN-EAITV------------LDSIATQGAKVRRNTYINLLQA 66
PR T F LCG R + AI+V +DS+ +G + T LL+
Sbjct: 34 PRKLKTRTVFPTLCGTRRASFAAISVYISEDESFQEKRIDSVENRGIRPNHQTLKWLLEG 93
Query: 67 CIDSN-SIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYT 124
C+ +N S+ RKLH+ L L + + + KL Y G L A +VF++M ER ++T
Sbjct: 94 CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFT 153
Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC-GNCGDFEAGKLMHSLV 183
W+ MI + EV LF MV + + P++ F +L+AC G F+ + +H+ +
Sbjct: 154 WNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARI 213
Query: 184 IKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
+ G+ V N ++ +Y + G + ARR F+ + KD +W +MISG + EA
Sbjct: 214 LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 273
Query: 244 RLFDKM------------------CR--EEIKLG---------------VVTFNILIRSY 268
RLF M C+ E +++G N L+ Y
Sbjct: 274 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLY 333
Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
LG A + M D T+ +I+G +Q G +A++LFK M G+ P+
Sbjct: 334 FHLGNLISAEHIFSNMSQ----RDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM 388
T+ S + AC+ L G ++H+ K+GF + + +L+N+Y+KC ++E A F
Sbjct: 390 NTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 389 IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA 448
+ ++V WN M+ Y ++ +F +MQ ++ PN T+ ++ I+ G+ +
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 449 ----------------------VDLFQRMGKNDK--------VKRNTASWNSLIAGYQQL 478
+D++ ++GK D ++ SW ++IAGY Q
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 569
Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
+ AL FR+M + V + + + ACA L A + ++IH S LP
Sbjct: 570 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQ 629
Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLK 598
N+L+ Y++ G I S F+ + D I WN+L+ G+ G AL +F +M G+
Sbjct: 630 NALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGID 689
Query: 599 PNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAME 658
N TF S + A S + GK+V IT+ E +A+I +Y + G + +A +
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKCGSISDAEK 748
Query: 659 FIEDMPIEPDSSIWEALLTACRIHG 683
++ + + S W A++ A HG
Sbjct: 749 QFLEVSTKNEVS-WNAIINAYSKHG 772
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust.
Identities = 268/832 (32%), Positives = 428/832 (51%), Gaps = 94/832 (11%)
Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
W ++ + R RE V + M+ G+ PD++ FP +L+A + D E GK +H+ V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 185 KLGMSCVR-RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAH 243
K G V N+++ +Y KCG + F+ + E++ V+WNS+IS + + A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 244 RLFDKMCREEIK------LGVVT-------------------------------FNILIR 266
F M E ++ + VVT N L+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVA 244
Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
Y +LG+ + + + S G D+ TW ++S QN + +AL+ +EM GV P
Sbjct: 245 MYGKLGKLASSKVL---LGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEP 300
Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD-VLVGNSLINMYSKCEELEAAERV 385
+ TI+S + AC+ L+ L G E+H+ A+K G D+ VG++L++MY C+++ + RV
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQES-DVPPNVITWNVLISGYIQNG- 443
FD + D+ + WN+MIAGY Q + +A LFI M+ES + N T ++ +++G
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 444 -NEDEAV--------------------DLFQRMGKNDKV--------KRNTASWNSLIAG 474
+ EA+ D++ R+GK D R+ +WN++I G
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 475 YQQLGQKNNALGVFRKMQS-----------SCFYPNCVTILSVLPACAYLVASNKVKEIH 523
Y +AL + KMQ+ PN +T++++LP+CA L A K KEIH
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
++ +L + + V ++L+D YAK G + SR +FD + K++ITWN +I Y +HG
Sbjct: 541 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQ 600
Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
A+DL M G+KPN TF+S+ A S +GMVD G ++F + Y + P +HY+ +
Sbjct: 601 EAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660
Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPD-SSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
+DL GR+G+++EA + + MP + + + W +LL A RIH N+++ +A + L LEP
Sbjct: 661 VDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNV 720
Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYS 762
L+ IY+ G + A +VR+ +E R G WIE + V+ FV G S S
Sbjct: 721 ASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQS 780
Query: 763 DLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
+ L +L+ + E +S +EE+EKE + HSEKLA+AF ++ +S P
Sbjct: 781 EKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTS--PG 838
Query: 818 T-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
T IR+ KN+R+C CH K++S + EI L D + H FKNG CSCGDYW
Sbjct: 839 TIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 232/484 (47%), Gaps = 55/484 (11%)
Query: 59 TYINLLQACID---SNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
T ++++ AC + + + +++HA+ E++ F+ L+++Y K G L ++ +
Sbjct: 201 TLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLG 260
Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
R+L TW+ ++ + ++++ E +E MV +G+ PD+F +L AC +
Sbjct: 261 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 320
Query: 176 GKLMHSLVIKLG-MSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
GK +H+ +K G + V ++++ +Y C +++ RR F+ M ++ WN+MI+GY
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 235 QIGENDEAHRLFDKM--------------------------CREEIKLGVVTF------- 261
Q + EA LF M R+E G V
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 440
Query: 262 ---NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
N L+ Y++LG+ D+AM + +ME D+ TW MI+G+ + AL L +
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMED----RDLVTWNTMITGYVFSEHHEDALLLLHK 496
Query: 319 M-----------SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
M S V + PN +T+ + + +C L ALA G EIH+ A+K DV VG+
Sbjct: 497 MQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGS 556
Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
+L++MY+KC L+ + +VFD I K+V +WN +I Y G +A +L M V P
Sbjct: 557 ALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKP 616
Query: 428 NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGV 487
N +T+ + + +G DE + +F M + V+ ++ + ++ + G+ A +
Sbjct: 617 NEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL 676
Query: 488 FRKM 491
M
Sbjct: 677 MNMM 680
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 126/542 (23%), Positives = 235/542 (43%), Gaps = 68/542 (12%)
Query: 26 DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-- 83
+T L LC N +L EA+ L + +G + T ++L AC + ++LHA+
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 84 NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVE 143
N + + FV + L+ +Y C + R VF+ M +R + W+AMI YS+++ +E +
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390
Query: 144 LFFLMVQD-GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVY 202
LF M + GL + ++ AC G F + +H V+K G+ R V+N+++ +Y
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMY 450
Query: 203 VKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM-----------CR 251
+ GK+ A R F M+++D V WN+MI+GY +++A L KM R
Sbjct: 451 SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASR 510
Query: 252 EEIKLGVVTFNILIRSYNQLG-----------------QCDVA--------------MEM 280
+K +T ++ S L DVA ++M
Sbjct: 511 VSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQM 570
Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTD 340
+++ +V TW +I + +G +A+DL + M GV PN VT S +AC+
Sbjct: 571 SRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSH 630
Query: 341 LKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD--KDVYSW 397
+ G+ I + + G ++++ + ++ A ++ +M+ +W
Sbjct: 631 SGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAW 690
Query: 398 NSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG-YIQNGNEDEAVDLFQ 453
+S++ + A + I+++ PNV + VL++ Y G D+A ++ +
Sbjct: 691 SSLLGASRIHNNLEIGEIAAQNLIQLE-----PNVASHYVLLANIYSSAGLWDKATEVRR 745
Query: 454 RMGKNDKVKRNTASW-------NSLIAGYQQLGQKNNALG----VFRKMQSSCFYPNCVT 502
M + K SW + +AG Q G ++ +M+ + P+
Sbjct: 746 NMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSC 805
Query: 503 IL 504
+L
Sbjct: 806 VL 807
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 251/778 (32%), Positives = 405/778 (52%), Gaps = 78/778 (10%)
Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
+LQ C + + GK + + + G + + + +Y CG L A R F+ + +
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159
Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY-------------- 268
+ WN +++ + G+ + LF KM +++ TF+ + +S+
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219
Query: 269 ----------NQLGQCDVAMEMV-KRMESLG------ITPDVFTWTCMISGFAQNGRTSQ 311
N +G VA + +R++S DV +W +I+G+ NG +
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
L +F +M G+ + TI S + C D + +++G +HS+ VK F+ + N+L++
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLD 339
Query: 372 MYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
MYSKC +L++A+ VF + D+ V S+ SMIAGY + G G+A +LF +M+E + P+V T
Sbjct: 340 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399
Query: 432 ----------------------W-------------NVLISGYIQNGNEDEAVDLFQRMG 456
W N L+ Y + G+ EA +F M
Sbjct: 400 VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459
Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM-QSSCFYPNCVTILSVLPACAYLVA 515
D + SWN++I GY + N AL +F + + F P+ T+ VLPACA L A
Sbjct: 460 VKDII-----SWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICG 575
+K +EIHG ++R S V NSL+D YAK G ++ + +FD ++SKD+++W +I G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574
Query: 576 YVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIP 635
Y +HGF A+ LF+QM+ G++ + +F+S++ A S +G+VD G + F + +I P
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEP 634
Query: 636 MIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERL 695
+EHY+ ++D+ R+G L +A FIE+MPI PD++IW ALL CRIH ++ LA E++
Sbjct: 635 TVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV 694
Query: 696 FDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTG 755
F+LEP + L+ IYA K E ++RK + R + G WIE+K V FV G
Sbjct: 695 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAG 754
Query: 756 GWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALI 810
S ++ + ++L+ V E + + ++ + EE EKEE HSEKLA+A +I
Sbjct: 755 DSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGII 814
Query: 811 GSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
S IR+ KN+R+C CHE AK++S + EI L DS H FK+G CSC +W
Sbjct: 815 SSGHGK-IIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 154/630 (24%), Positives = 289/630 (45%), Gaps = 89/630 (14%)
Query: 26 DTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL 85
+T L C +G L A+ +L + + T ++LQ C DS S+ +++ F+
Sbjct: 65 NTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRG 122
Query: 86 VT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
ID + +KL +Y CG L +A VF++++ W+ ++ ++ + + L
Sbjct: 123 NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGL 182
Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVK 204
F M+ G+ D + F + ++ + G+ +H ++K G V NS++A Y+K
Sbjct: 183 FKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK 242
Query: 205 CGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--- 261
++ AR+ F+ M E+D ++WNS+I+GY G ++ +F +M I++ + T
Sbjct: 243 NQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSV 302
Query: 262 --------------------------------NILIRSYNQLGQCDVAMEMVKRMESLGI 289
N L+ Y++ G D A + + M
Sbjct: 303 FAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD--- 359
Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
V ++T MI+G+A+ G +A+ LF+EM G+ P+ T+T+ ++ C + L G
Sbjct: 360 -RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKR 418
Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
+H + D+ V N+L++MY+KC ++ AE VF ++ KD+ SWN++I GY + Y
Sbjct: 419 VHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCY 478
Query: 410 CGKAYELF-IKMQESDVPPNVITWNVL---------------ISGYI-QNGN------ED 446
+A LF + ++E P+ T + I GYI +NG +
Sbjct: 479 ANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN 538
Query: 447 EAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
VD++ + G +D ++ SW +IAGY G A+ +F +M+ +
Sbjct: 539 SLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEA 598
Query: 499 NCVTILSVLPACAYLVASNKVKE--------IHGCVLRRSLESSLPVMNSLIDTYAKSGN 550
+ ++ +S+L AC++ S V E H C +E ++ ++D A++G+
Sbjct: 599 DEISFVSLLYACSH---SGLVDEGWRFFNIMRHEC----KIEPTVEHYACIVDMLARTGD 651
Query: 551 IVYSRTIFDGMS-SKDIITWNSLICGYVLH 579
++ + + M D W +L+CG +H
Sbjct: 652 LIKAYRFIENMPIPPDATIWGALLCGCRIH 681
Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 502 TILSVLPACAYLVASNKVKEI------HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
T+ SVL CA + KE+ +G V+ +L S L +M Y G++ +
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLM------YTNCGDLKEAS 149
Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
+FD + + + WN L+ G + ++ LF +M S G++ + TF
Sbjct: 150 RVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 284/928 (30%), Positives = 468/928 (50%), Gaps = 88/928 (9%)
Query: 18 KKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLAR 77
++SN + C +G L EA LD ++ + V Y+ L+ C ++ R
Sbjct: 44 RQSNQPVQVPSPKLACFDGVLTEAFQRLD-VSENNSPVEAFAYV--LELCGKRRAVSQGR 100
Query: 78 KLHA--FLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSR 134
+LH+ F + E+D F+ KL+ +Y KCG LDDA +VF++M +R + W+ MIGAY
Sbjct: 101 QLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVS 159
Query: 135 DQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRV 194
+ + L++ M +G+ FP +L+AC D +G +HSL++KLG +
Sbjct: 160 NGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI 219
Query: 195 RNSVLAVYVKCGKLIWARRFFESMDEK-DGVAWNSMISGYFQIGENDEAHRLFDKM---- 249
N+++++Y K L ARR F+ EK D V WNS++S Y G++ E LF +M
Sbjct: 220 VNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG 279
Query: 250 ----------------------CREEIKLGVV----------TFNILIRSYNQLGQCDVA 277
+EI V+ N LI Y + G+ A
Sbjct: 280 PAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQA 339
Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
++++M + DV TW +I G+ QN +AL+ F +M G + V++TS I+A
Sbjct: 340 ERILRQMNN----ADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
L L GME+H+ +K G+ ++ VGN+LI+MYSKC R F + DKD+ SW
Sbjct: 396 SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISW 455
Query: 398 NSMIAGYCQAGYCGKAYELFIK----------------MQESDVPPNV-----ITWNVLI 436
++IAGY Q +A ELF ++ S V ++ I ++L
Sbjct: 456 TTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR 515
Query: 437 SGYIQNGNEDEAVDLF---QRMGKNDKV-----KRNTASWNSLIAGYQQLGQKNNALGVF 488
G + ++E VD++ + MG +V ++ SW S+I+ G ++ A+ +F
Sbjct: 516 KGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELF 575
Query: 489 RKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS--LESSLPVMNSLIDTYA 546
R+M + + V +L +L A A L A NK +EIH +LR+ LE S+ V +++D YA
Sbjct: 576 RRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV--AVVDMYA 633
Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
G++ ++ +FD + K ++ + S+I Y +HG AA++LFD+M+ + P+ +FL+
Sbjct: 634 CCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLA 693
Query: 607 IILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
++ A S AG++D G+ + Y++ P EHY ++D+ GR+ + EA EF++ M E
Sbjct: 694 LLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTE 753
Query: 667 PDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVR 726
P + +W ALL ACR H ++ +A +RL +LEP + L+ ++A G+ D KVR
Sbjct: 754 PTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVR 813
Query: 727 KLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC 786
+ + G WIE+ V+ F S S +Y L V + +
Sbjct: 814 AKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADT 873
Query: 787 ------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSM 840
++E EK ++ HSE++A+A+ L+ + +RI KN+R+C CH K VS
Sbjct: 874 KFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRA-CLRITKNLRVCRDCHTFCKLVSK 932
Query: 841 MHHCEIFLADSKCLHHFKNGQCSCGDYW 868
+ +I + D+ HHF++G CSCGD W
Sbjct: 933 LFRRDIVMRDANRFHHFESGLCSCGDSW 960
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust.
Identities = 253/762 (33%), Positives = 402/762 (52%), Gaps = 53/762 (6%)
Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE-AGK 177
+ ++ W+ I +Y R R E + +F M + + + L+ G+FE A K
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRN----GEFELARK 116
Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
L + + +S N ++ YV+ L AR FE M E+D +WN+M+SGY Q G
Sbjct: 117 LFDEMPERDLVSW-----NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNG 171
Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
D+A +FD+M + V++N L+ +Y Q + + A + K E+ + +W
Sbjct: 172 CVDDARSVFDRMPEKND----VSWNALLSAYVQNSKMEEACMLFKSRENWALV----SWN 223
Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
C++ GF + + +A F M+ V+ IT + +A + E
Sbjct: 224 CLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE-------- 275
Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
DV ++++ Y + +E A +FD + +++ SWN+M+AGY Q A ELF
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 418 IKMQESDVPP--NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGY 475
DV P NV TWN +I+GY Q G EA +LF +M K D V SW ++IAGY
Sbjct: 336 ------DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV-----SWAAMIAGY 384
Query: 476 QQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL 535
Q G AL +F +M+ N + S L CA +VA K++HG +++ E+
Sbjct: 385 SQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGC 444
Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
V N+L+ Y K G+I + +F M+ KDI++WN++I GY HGF AL F+ MK
Sbjct: 445 FVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKRE 504
Query: 596 GLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
GLKP+ T ++++ A S G+VD G++ F ++T+ Y ++P +HY+ M+DL GR+G LE+
Sbjct: 505 GLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLED 564
Query: 656 AMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAI 715
A +++MP EPD++IW LL A R+HGN +LA A +++F +EP + + L+ +YA
Sbjct: 565 AHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYAS 624
Query: 716 CGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPEN 775
G+ D K+R R+ + G WIE++N +TF G D ++++L E
Sbjct: 625 SGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFL----EE 680
Query: 776 VTARSSHSGLC---------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIR 826
+ R +G +EEEEKE + HSE+LA+A+ ++ S IR++KN+R
Sbjct: 681 LDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSG-RPIRVIKNLR 739
Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
+C CH KY++ + I L D+ HHFK+G CSCGDYW
Sbjct: 740 VCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 134/479 (27%), Positives = 226/479 (47%), Gaps = 55/479 (11%)
Query: 63 LLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL 122
+++ + + ++ AR+L ++ E DV +LS YA+ GC+DDAR VF+ M E+N
Sbjct: 132 MIKGYVRNRNLGKAREL---FEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKND 188
Query: 123 YTWSAMIGAYSRDQRWREVVELF-----FLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
+W+A++ AY ++ + E LF + +V F+ K + EA +
Sbjct: 189 VSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKI--------VEARQ 240
Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
S+ ++ +S N+++ Y + GK+ AR+ F+ +D W +M+SGY Q
Sbjct: 241 FFDSMNVRDVVSW-----NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNR 295
Query: 238 ENDEAHRLFDKMC-REEIKL--------------------------GVVTFNILIRSYNQ 270
+EA LFDKM R E+ V T+N +I Y Q
Sbjct: 296 MVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQ 355
Query: 271 LGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
G+ A + +M D +W MI+G++Q+G + +AL LF +M G N +
Sbjct: 356 CGKISEAKNLFDKMPK----RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSS 411
Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
+SA+S C D+ AL +G ++H VK G+ VGN+L+ MY KC +E A +F +
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 471
Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
KD+ SWN+MIAGY + G+ A F M+ + P+ T ++S G D+
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Query: 451 LFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
F M ++ V N+ + ++ + G +A + + M F P+ ++L A
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP---FEPDAAIWGTLLGA 587
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 103/213 (48%), Gaps = 3/213 (1%)
Query: 40 EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLL 98
EA+ + + +G ++ R+++ + L C D ++ L ++LH L E FV LL
Sbjct: 392 EALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALL 451
Query: 99 SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
+Y KCG +++A ++F++M +++ +W+ MI YSR + F M ++GL PDD
Sbjct: 452 LMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 511
Query: 159 LFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
+L AC + G + G+ +++ G+ + ++ + + G L A ++
Sbjct: 512 TMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKN 571
Query: 218 MD-EKDGVAWNSMISGYFQIGENDEAHRLFDKM 249
M E D W +++ G + A DK+
Sbjct: 572 MPFEPDAAIWGTLLGASRVHGNTELAETAADKI 604
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 264/836 (31%), Positives = 410/836 (49%), Gaps = 84/836 (10%)
Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
L +A +F+ R+ ++ +++ +SRD R +E LF + + G+ D +F +L+
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
D G+ +H IK G V S++ Y+K R+ F+ M E++ V W
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------------- 261
++ISGY + NDE LF +M E + TF
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 262 ----------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQ 311
N LI Y + G A + + E V TW MISG+A NG +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE----VKSVVTWNSMISGYAANGLDLE 278
Query: 312 ALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLIN 371
AL +F M V + + S I C +LK L ++H VK GF D + +L+
Sbjct: 279 ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMV 338
Query: 372 MYSKCEELEAAERVFDMIK-DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVI 430
YSKC + A R+F I +V SW +MI+G+ Q +A +LF +M+ V PN
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398
Query: 431 TWNV-------------------------------LISGYIQNGNEDEAVDLFQRMGKND 459
T++V L+ Y++ G +EA +F G +D
Sbjct: 399 TYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS--GIDD 456
Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS-NK 518
K + +W++++AGY Q G+ A+ +F ++ PN T S+L CA AS +
Sbjct: 457 K---DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQ 513
Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
K+ HG ++ L+SSL V ++L+ YAK GNI + +F KD+++WNS+I GY
Sbjct: 514 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQ 573
Query: 579 HGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIE 638
HG ALD+F +MK +K + TF+ + A + AG+V+ G+K F + +I P E
Sbjct: 574 HGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKE 633
Query: 639 HYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDL 698
H S M+DLY R+G+LE+AM+ IE+MP S+IW +L ACR+H +L LA E++ +
Sbjct: 634 HNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAM 693
Query: 699 EPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWS 758
+P D L+ +YA G ++ KVRKL E + G WIEVKN Y+F+ G S
Sbjct: 694 KPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRS 753
Query: 759 ESYSDLLYSWLQNVPENVT-----ARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSS 813
D +Y L+++ + +S+ I++E KE + HSE+LA+AF LI +
Sbjct: 754 HPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATP 813
Query: 814 QAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHF-KNGQCSCGDYW 868
+ + I+KN+R+C CH K ++ + EI + DS HHF +G CSCGD+W
Sbjct: 814 KGSPLL-IIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 245 bits (626), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 178/643 (27%), Positives = 298/643 (46%), Gaps = 93/643 (14%)
Query: 16 LTKKSNPRFRDTHLDFLCG---NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNS 72
L KS R R++++ L G +GR EA + +I G ++ + + ++L+
Sbjct: 49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCD 108
Query: 73 IHLARKLH------AFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWS 126
R+LH FL+ DV V T L+ Y K D R+VF++M+ERN+ TW+
Sbjct: 109 ELFGRQLHCQCIKFGFLD-----DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWT 163
Query: 127 AMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL 186
+I Y+R+ EV+ LF M +G P+ F F L G G +H++V+K
Sbjct: 164 TLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 223
Query: 187 GMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF 246
G+ V NS++ +Y+KCG + AR F+ + K V WNSMISGY G + EA +F
Sbjct: 224 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 283
Query: 247 DKMCREEIKLGVVTFNILI---------RSYNQL-----------------------GQC 274
M ++L +F +I R QL +C
Sbjct: 284 YSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKC 343
Query: 275 DVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSA 334
++ ++ + +G +V +WT MISGF QN +A+DLF EM GV PN T +
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVI 403
Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
++A + E+H+ VK + VG +L++ Y K ++E A +VF I DKD+
Sbjct: 404 LTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDI 459
Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---------------------- 432
+W++M+AGY Q G A ++F ++ + + PN T+
Sbjct: 460 VAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHG 519
Query: 433 --------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQL 478
+ L++ Y + GN + A ++F+R + D V SWNS+I+GY Q
Sbjct: 520 FAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLV-----SWNSMISGYAQH 574
Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
GQ AL VF++M+ + VT + V AC + + ++ ++R +
Sbjct: 575 GQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEH 634
Query: 539 NS-LIDTYAKSGNIVYSRTIFDGMSSKDIIT-WNSLICGYVLH 579
NS ++D Y+++G + + + + M + T W +++ +H
Sbjct: 635 NSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVH 677
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 264/882 (29%), Positives = 444/882 (50%), Gaps = 89/882 (10%)
Query: 65 QACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE-RNL 122
+A S++++ R++HA ++L + F KL+ Y+ + VF + +N+
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 123 YTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSL 182
Y W+++I A+S++ + E +E + + + + PD + FP +++AC D E G L++
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 183 VIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEA 242
++ +G V N+++ +Y + G L AR+ F+ M +D V+WNS+ISGY G +EA
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 243 HRLFDKMCREEIKLGVVTFNILIRSYNQL-----GQ-------------------CDVAM 278
++ ++ I T + ++ ++ L GQ VAM
Sbjct: 192 LEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 279 EM-------VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
+ +R+ D ++ MI G+ + +++ +F E + P+ +T+
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTV 310
Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
+S + AC L+ L++ I++ +K GF + V N LI++Y+KC ++ A VF+ ++
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------------- 432
KD SWNS+I+GY Q+G +A +LF M + + IT+
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430
Query: 433 ----------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
N LI Y + G +++ +F MG D T +WN++I+
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGD-----TVTWNTVISACV 485
Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
+ G L V +M+ S P+ T L LP CA L A KEIH C+LR ES L
Sbjct: 486 RFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQ 545
Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
+ N+LI+ Y+K G + S +F+ MS +D++TW +I Y ++G AL+ F M+ G
Sbjct: 546 IGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSG 605
Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
+ P+ F++II A S +G+VD G F + Y+I PMIEHY+ ++DL RS K+ +A
Sbjct: 606 IVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKA 665
Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
EFI+ MPI+PD+SIW ++L ACR G+++ A R+ +L P D L YA
Sbjct: 666 EEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAAL 725
Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQ------ 770
K + +RK ++ + G WIEV V+ F +G S S+ +Y L+
Sbjct: 726 RKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLM 785
Query: 771 ----NVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIR 826
+P+ R L EEE++ I G HSE+LA+AF L+ +++ ++++KN+R
Sbjct: 786 AKEGYIPD---PREVSQNLEEEEEKRRLICG-HSERLAIAFGLL-NTEPGTPLQVMKNLR 840
Query: 827 MCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
+C CHE K +S + EI + D+ H FK+G CSC D W
Sbjct: 841 VCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 158/648 (24%), Positives = 277/648 (42%), Gaps = 119/648 (18%)
Query: 161 PKILQACGNCGDFEAGKLMHSLVIKLG------------------------MSCVRRVR- 195
P I +A + + + +H+LVI LG +S RRV
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 196 -------NSVLAVYVKCGKLIWARRFF----ESMDEKDGVAWNSMISGYFQIGENDEAHR 244
NS++ + K G A F+ ES D + S+I + + +
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 245 LFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFA 304
+++++ + + N L+ Y+++G A ++ M D+ +W +ISG++
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMP----VRDLVSWNSLISGYS 183
Query: 305 QNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVL 364
+G +AL+++ E+ ++P+ T++S + A +L + G +H A+K G V+
Sbjct: 184 SHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVV 243
Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
V N L+ MY K A RVFD + +D S+N+MI GY + ++ +F++ +
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ- 302
Query: 425 VPPNVIT-----------------------------------WNVLISGYIQNGNEDEAV 449
P+++T N+LI Y + G+ A
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPA 509
D+F M D T SWNS+I+GY Q G A+ +F+ M + +T L ++
Sbjct: 363 DVFNSMECKD-----TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
Query: 510 CAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITW 569
L K +H ++ + L V N+LID YAK G + S IF M + D +TW
Sbjct: 418 STRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTW 477
Query: 570 NSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFL-SIILAHSLAGMVDLGKKVFC--- 625
N++I V G + L + QM+ + P+ TFL ++ + SLA LGK++ C
Sbjct: 478 NTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK-RLGKEIHCCLL 536
Query: 626 ------------SITECYQIIPMIEH---------------YSAMIDLYGRSGKLEEAME 658
++ E Y +E+ ++ MI YG G+ E+A+E
Sbjct: 537 RFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALE 596
Query: 659 FIEDMP---IEPDSSIWEALLTACRIHGNIDLAVLAIERL---FDLEP 700
DM I PDS ++ A++ AC G +D + E++ + ++P
Sbjct: 597 TFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDP 644
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 272/924 (29%), Positives = 446/924 (48%), Gaps = 98/924 (10%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQAC--IDSNSIHLARKLHAFL-NLVTEIDV 91
NG EA+ L + +G + ++++L+AC I S I R++H + L +D
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 92 FVKTKLLSVYAKC-GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
V L+S+Y KC G + A F D+ +N +W+++I YS+ R +F M
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 151 DGLFPDDFLFPKILQ-ACG-NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
DG P ++ F ++ AC D + + + K G+ V + +++ + K G L
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------- 249
+AR+ F M+ ++ V N ++ G + +EA +LF M
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFP 319
Query: 250 ---CREEIKL-------------GVVTF-----NILIRSYNQLGQCDVAMEMVKRMESLG 288
EE+ L G+V F N L+ Y + G A +R+
Sbjct: 320 EYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADA----RRVFYFM 375
Query: 289 ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGM 348
D +W MI+G QNG +A++ +K M ++P T+ S++S+C LK +G
Sbjct: 376 TDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
+IH ++K+G +V V N+L+ +Y++ L ++F + + D SWNS+I ++
Sbjct: 436 QIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSE 495
Query: 409 YC-GKAYELFIKMQESDVPPNVITW----------------------------------- 432
+A F+ Q + N IT+
Sbjct: 496 RSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTE 555
Query: 433 NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
N LI+ Y + G D +F RM + +R+ +WNS+I+GY AL + M
Sbjct: 556 NALIACYGKCGEMDGCEKIFSRMAE----RRDNVTWNSMISGYIHNELLAKALDLVWFML 611
Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV 552
+ + +VL A A + + E+H C +R LES + V ++L+D Y+K G +
Sbjct: 612 QTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLD 671
Query: 553 YSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG-LKPNRGTFLSIILAH 611
Y+ F+ M ++ +WNS+I GY HG AL LF+ MK G P+ TF+ ++ A
Sbjct: 672 YALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSAC 731
Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
S AG+++ G K F S+++ Y + P IEH+S M D+ GR+G+L++ +FIE MP++P+ I
Sbjct: 732 SHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLI 791
Query: 672 WEALLTAC-RIHG-NIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLE 729
W +L AC R +G +L A E LF LEP + + L+ +YA G+ ED +K RK
Sbjct: 792 WRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKM 851
Query: 730 RENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV--TARSSHSGLCI 787
++ + G W+ +K+ V+ FV G S +D++Y L+ + + +G +
Sbjct: 852 KDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFAL 911
Query: 788 ---EEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
E+E KEEI HSEKLA+AF L + IRI+KN+R+C CH KY+S +
Sbjct: 912 YDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGR 971
Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
+I L DS HHF++G CSC D+W
Sbjct: 972 QIILRDSNRFHHFQDGACSCSDFW 995
Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 199/746 (26%), Positives = 344/746 (46%), Gaps = 92/746 (12%)
Query: 61 INLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRE 119
++ +Q+C+ AR H+ L + DV++ L++ Y + G AR+VF++M
Sbjct: 7 LSFVQSCVGHRGA--ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 120 RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA--GK 177
RN +W+ ++ YSR+ +E + MV++G+F + + F +L+AC G G+
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKC-GKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
+H L+ KL + V N ++++Y KC G + +A F ++ K+ V+WNS+IS Y Q
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAM--EMVKRMESLGITPDVF 294
G+ A R+F M + + TF L+ + L + DV + +++ ++ G+ D+F
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 295 TWTCMISGFAQNGRTSQALDLFKEM--------------------------------SFV 322
+ ++S FA++G S A +F +M S +
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMI 304
Query: 323 GVMPNG-VTITSAIS--ACTDLKALAMGMEIHSLAVKMGFTDDVL-VGNSLINMYSKCEE 378
V P V + S+ + + L G E+H + G D ++ +GN L+NMY+KC
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 379 LEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP----------- 427
+ A RVF + DKD SWNSMI G Q G +A E + M+ D+ P
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 428 ------------------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
NV N L++ Y + G +E +F M ++D+V
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQV-- 482
Query: 464 NTASWNSLIAGYQQLGQK-NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEI 522
SWNS+I + + A+ F Q + N +T SVL A + L K+I
Sbjct: 483 ---SWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI 539
Query: 523 HGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS-KDIITWNSLICGYVLHGF 581
HG L+ ++ N+LI Y K G + IF M+ +D +TWNS+I GY+ +
Sbjct: 540 HGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNEL 599
Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF-CSITECYQIIPMIEHY 640
ALDL M G + + + +++ A + ++ G +V CS+ C + ++
Sbjct: 600 LAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVG-- 657
Query: 641 SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIE--RLFDL 698
SA++D+Y + G+L+ A+ F MP+ +S W ++++ HG + A+ E +L
Sbjct: 658 SALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARHGQGEEALKLFETMKLDGQ 716
Query: 699 EPGDVLIQRLILQIYAICGKPEDALK 724
P D + +L + G E+ K
Sbjct: 717 TPPDHVTFVGVLSACSHAGLLEEGFK 742
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
NCV LS + +C + + H + + L+ + + N+LI+ Y ++G+ V +R +F
Sbjct: 3 NCVP-LSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVF 59
Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
D M ++ ++W ++ GY +G AL M G+ N+ F+S++ A G V
Sbjct: 60 DEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVG 119
Query: 619 L 619
+
Sbjct: 120 I 120
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust.
Identities = 251/890 (28%), Positives = 434/890 (48%), Gaps = 101/890 (11%)
Query: 56 RRNTYINLLQACI------DSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGC 106
R N NL ++CI +SNS + +H + L+ +D+ LLS+Y K
Sbjct: 16 RTNELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLC--NNLLSLYLKTDG 73
Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
+ +AR++F++M R ++ W+ MI A+++ Q + + LF M+ G P++F F ++++
Sbjct: 74 IWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRS 133
Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
C D G +H VIK G V +S+ +Y KCG+ A F S+ D ++W
Sbjct: 134 CAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISW 193
Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIK---------LGVVTF-----------NILIR 266
MIS + EA + + +M + + LG +F NI++R
Sbjct: 194 TMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVR 253
Query: 267 S--------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
Y+Q + + A V+ + S G DVF WT ++SGF +N R +A
Sbjct: 254 GIPLNVVLKTSLVDFYSQFSKMEDA---VRVLNSSG-EQDVFLWTSVVSGFVRNLRAKEA 309
Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
+ F EM +G+ PN T ++ +S C+ +++L G +IHS +K+GF D VGN+L++M
Sbjct: 310 VGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDM 369
Query: 373 YSKCEELEA-AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
Y KC E A RVF + +V SW ++I G G+ + L ++M + +V PNV+T
Sbjct: 370 YMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVT 429
Query: 432 W-----------------------------------NVLISGYIQNGNEDEAVDLFQRMG 456
N L+ Y + D A ++ + M
Sbjct: 430 LSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK 489
Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVAS 516
+ D + ++ SL+ + +LG+ AL V M + +++ + A A L A
Sbjct: 490 RRDNI-----TYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGAL 544
Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
K +H ++ + V+NSL+D Y+K G++ ++ +F+ +++ D+++WN L+ G
Sbjct: 545 ETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGL 604
Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPM 636
+GF +AL F++M+ +P+ TFL ++ A S + DLG + F + + Y I P
Sbjct: 605 ASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQ 664
Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLF 696
+EHY ++ + GR+G+LEEA +E M ++P++ I++ LL ACR GN+ L +
Sbjct: 665 VEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGL 724
Query: 697 DLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGG 756
L P D + L+ +Y GKPE A K R L E G+ +EV+ V++FV+
Sbjct: 725 ALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSED 784
Query: 757 WSE-SYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALI-GSSQ 814
+ ++ +Y+ ++++ E + S E + HS K A+ + I S +
Sbjct: 785 VTRVDKTNGIYAEIESIKEEIKRFGS-------PYRGNENASFHSAKQAVVYGFIYASPE 837
Query: 815 APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
AP + +VKN +C CHE ++ + +I + D +H FKNG+CSC
Sbjct: 838 AP--VHVVKNKILCKDCHEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 148/348 (42%), Gaps = 33/348 (9%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
N R EA+ + + G + TY +L C S+ +++H+ + + E V
Sbjct: 303 NLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDV 362
Query: 94 KTKLLSVYAKCGCLD-DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
L+ +Y KC + +A VF M N+ +W+ +I ++ L MV+
Sbjct: 363 GNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKRE 422
Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
+ P+ +L+AC +H+ +++ + V NS++ Y K+ +A
Sbjct: 423 VEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAW 482
Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
SM +D + + S+++ + ++G+++ A + + M + I++ ++ I + LG
Sbjct: 483 NVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLG 542
Query: 273 QCDV-------------------------------AMEMVKRMESLGITPDVFTWTCMIS 301
+ ++E K++ TPDV +W ++S
Sbjct: 543 ALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVS 602
Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
G A NG S AL F+EM P+ VT +SAC++ + +G+E
Sbjct: 603 GLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLE 650
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust.
Identities = 252/825 (30%), Positives = 423/825 (51%), Gaps = 91/825 (11%)
Query: 90 DVFVKTKLLSVYAKCGC---LDDAREVFEDMRERNL-YTWSAMIGAYSRDQRWREVVELF 145
DV TKL++ + G L A+EVFE+ + ++++I Y+ E + LF
Sbjct: 63 DVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLF 122
Query: 146 FLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
M+ G+ PD + FP L AC G +H L++K+G + V+NS++ Y +C
Sbjct: 123 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 182
Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR-EEIKLGVVTFNIL 264
G+L AR+ F+ M E++ V+W SMI GY + +A LF +M R EE+ VT +
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 265 IRSYNQLGQCDV-------------------------------AMEMVKRMESLGITPDV 293
I + +L + A+++ KR+ ++
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
M S + + G T +AL +F M GV P+ +++ SAIS+C+ L+ + G H
Sbjct: 303 DLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGY 362
Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
++ GF + N+LI+MY KC + A R+FD + +K
Sbjct: 363 VLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK--------------------- 401
Query: 414 YELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIA 473
V+TWN +++GY++NG D A + F+ M + +N SWN++I+
Sbjct: 402 --------------TVVTWNSIVAGYVENGEVDAAWETFETMPE-----KNIVSWNTIIS 442
Query: 474 GYQQLGQKNNALGVFRKMQSS-CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLE 532
G Q A+ VF MQS + VT++S+ AC +L A + K I+ + + ++
Sbjct: 443 GLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQ 502
Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
+ + +L+D +++ G+ + +IF+ ++++D+ W + I + G A++LFD M
Sbjct: 503 LDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGK 652
GLKP+ F+ + A S G+V GK++F S+ + + + P HY M+DL GR+G
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622
Query: 653 LEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQI 712
LEEA++ IEDMP+EP+ IW +LL ACR+ GN+++A A E++ L P L+ +
Sbjct: 623 LEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNV 682
Query: 713 YAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV 772
YA G+ D KVR +E R G I+++ + F +G ES+ ++ ++ +
Sbjct: 683 YASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSG--DESHPEM--PNIEAM 738
Query: 773 PENVTARSSHSG---------LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
+ V+ R+SH G + ++E+EK + HSEKLA+A+ LI S++ TIRIVK
Sbjct: 739 LDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGT-TIRIVK 797
Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
N+R+C CH AK+ S +++ EI L D+ H+ + G+CSCGD+W
Sbjct: 798 NLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 155 bits (393), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 203/454 (44%), Gaps = 44/454 (9%)
Query: 59 TYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
T + ++ AC + K++AF+ N E++ + + L+ +Y KC +D A+ +F++
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEY 297
Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
NL +AM Y R RE + +F LM+ G+ PD + +C + GK
Sbjct: 298 GASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGK 357
Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
H V++ G + N+++ +Y+KC + A R F+ M K V WNS+++GY + G
Sbjct: 358 SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENG 417
Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
E D A F+ M + I +W
Sbjct: 418 EVDAAWETFETMPEKNI---------------------------------------VSWN 438
Query: 298 CMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
+ISG Q +A+++F M S GV +GVT+ S SAC L AL + I+ K
Sbjct: 439 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 498
Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
G DV +G +L++M+S+C + E+A +F+ + ++DV +W + I AG +A EL
Sbjct: 499 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIEL 558
Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
F M E + P+ + + ++ G + ++F M K V + ++
Sbjct: 559 FDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLG 618
Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
+ G A+ + M PN V S+L AC
Sbjct: 619 RAGLLEEAVQLIEDMP---MEPNDVIWNSLLAAC 649
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 224/760 (29%), Positives = 403/760 (53%), Gaps = 38/760 (5%)
Query: 32 LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-- 89
LC NG + EA++++ + + ++ Y +LQ C+ + +++HA + +
Sbjct: 45 LCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYA 104
Query: 90 -DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLM 148
+ +++TKL+ YAKC L+ A +F +R RN+++W+A+IG R + F M
Sbjct: 105 RNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEM 164
Query: 149 VQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
+++ +FPD+F+ P + +ACG G+ +H V+K G+ V +S+ +Y KCG L
Sbjct: 165 LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVL 224
Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
A + F+ + +++ VAWN+++ GY Q G+N+EA RLF M ++ ++ VT + + +
Sbjct: 225 DDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSAS 284
Query: 269 NQLGQCDV-----AMEMVKRME---SLGIT-----------------------PDVFTWT 297
+G + A+ +V ME LG + DV TW
Sbjct: 285 ANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWN 344
Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
+ISG+ Q G A+ + + M + + VT+ + +SA + L +G E+ ++
Sbjct: 345 LIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRH 404
Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
F D+++ +++++MY+KC + A++VFD +KD+ WN+++A Y ++G G+A LF
Sbjct: 405 SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLF 464
Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
MQ VPPNVITWN++I ++NG DEA D+F +M ++ + N SW +++ G Q
Sbjct: 465 YGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTMMNGMVQ 523
Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSL-P 536
G A+ RKMQ S PN +I L ACA+L + + + IHG ++R SSL
Sbjct: 524 NGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVS 583
Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
+ SL+D YAK G+I + +F ++ N++I Y L+G A+ L+ ++ G
Sbjct: 584 IETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVG 643
Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
LKP+ T +++ A + AG ++ ++F I + P +EHY M+DL +G+ E+A
Sbjct: 644 LKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKA 703
Query: 657 MEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAIC 716
+ IE+MP +PD+ + ++L+ +C +L +L + EP + I YA+
Sbjct: 704 LRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVE 763
Query: 717 GKPEDALKVRKLERENTRRNSFGQCWIEV--KNLVYTFVT 754
G ++ +K+R++ + + G WI++ + V+ FV
Sbjct: 764 GSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVA 803
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 199/425 (46%), Gaps = 42/425 (9%)
Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
+P ++ +S +NG +AL L EM F + + C + L+ G +
Sbjct: 32 SPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQ 91
Query: 350 IHSLAVKMG--FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
IH+ +K G + + + L+ Y+KC+ LE AE +F ++ ++V+SW ++I C+
Sbjct: 92 IHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRI 151
Query: 408 GYCGKAYELFIKMQESDV-PPNVITWNVL--------------ISGY-IQNGNED----- 446
G C A F++M E+++ P N + NV + GY +++G ED
Sbjct: 152 GLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVA 211
Query: 447 -EAVDLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
D++ + G D RN +WN+L+ GY Q G+ A+ +F M+
Sbjct: 212 SSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE 271
Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
P VT+ + L A A + + K+ H + +E + SL++ Y K G I Y+ +
Sbjct: 272 PTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMV 331
Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
FD M KD++TWN +I GYV G A+ + M+ LK + T +++ A + +
Sbjct: 332 FDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENL 391
Query: 618 DLGKKVFCSITECYQIIPMIEH----YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWE 673
LGK+V +CY I E S ++D+Y + G + +A + D +E D +W
Sbjct: 392 KLGKEV-----QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF-DSTVEKDLILWN 445
Query: 674 ALLTA 678
LL A
Sbjct: 446 TLLAA 450
Score = 73.6 bits (179), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 3/198 (1%)
Query: 27 THLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL--N 84
T ++ + NG EAI L + G + + L AC S+H+ R +H ++ N
Sbjct: 516 TMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRN 575
Query: 85 LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
L V ++T L+ +YAKCG ++ A +VF L +AMI AY+ +E + L
Sbjct: 576 LQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIAL 635
Query: 145 FFLMVQDGLFPDDFLFPKILQACGNCGDF-EAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
+ + GL PD+ +L AC + GD +A ++ +V K M ++ +
Sbjct: 636 YRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLA 695
Query: 204 KCGKLIWARRFFESMDEK 221
G+ A R E M K
Sbjct: 696 SAGETEKALRLIEEMPFK 713
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust.
Identities = 239/785 (30%), Positives = 395/785 (50%), Gaps = 85/785 (10%)
Query: 63 LLQACIDSNSIHLARKLHAFLNLVTEI--DVFVKTKLLSVYAKCGCLDDAREVFE--DMR 118
LLQAC + N + +++HAFL +V I D + ++L +YA CG D ++F D+R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFL-IVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKL 178
++ W+++I ++ R+ + + +F M+ G+ PD FP +++AC +F+
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 179 MHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGE 238
+ V LGM C V +S++ Y++ GK+ + F+ + +KD V WN M++GY + G
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 239 NDEAHRLFDKMCREEIKLGVVTF-----------------------------------NI 263
D + F M ++I VTF N
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
L+ Y++ G+ D A ++ + M D TW CMISG+ Q+G ++L F EM G
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMS----RADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
V+P+ +T +S + + + + L +IH ++ + D+ + ++LI+ Y KC + A+
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW----------- 432
+F DV + +MI+GY G + E+F + + + PN IT
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455
Query: 433 ---------------------NV---LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
N+ +I Y + G + A ++F+R+ K D V SW
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIV-----SW 510
Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
NS+I Q + A+ +FR+M S +CV+I + L ACA L + + K IHG +++
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK 570
Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
SL S + ++LID YAK GN+ + +F M K+I++WNS+I HG +L L
Sbjct: 571 HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCL 630
Query: 589 FDQM-KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
F +M + G++P++ TFL II + G VD G + F S+TE Y I P EHY+ ++DL+
Sbjct: 631 FHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLF 690
Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
GR+G+L EA E ++ MP PD+ +W LL ACR+H N++LA +A +L DL+P +
Sbjct: 691 GRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYV 750
Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
LI +A + E KVR L +E + G WIE+ + FV+G + S +YS
Sbjct: 751 LISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYS 810
Query: 768 WLQNV 772
L ++
Sbjct: 811 LLNSL 815
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 164/681 (24%), Positives = 301/681 (44%), Gaps = 88/681 (12%)
Query: 10 QQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACID 69
+ + L ++S+ R ++ + NG LN+A+ + G +T+ L++AC+
Sbjct: 91 KMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVA 150
Query: 70 SNSIHLARKLHAFLN-LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAM 128
+ L ++ L + + FV + L+ Y + G +D ++F+ + +++ W+ M
Sbjct: 151 LKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVM 210
Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM 188
+ Y++ V++ F +M D + P+ F +L C + + G +H LV+ G+
Sbjct: 211 LNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGV 270
Query: 189 SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
++NS+L++Y KCG+ A + F M D V WN MISGY Q G +E+ F +
Sbjct: 271 DFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYE 330
Query: 249 MCREEIKLGVVTFNILIRS---YNQLGQC--------------DV--------------A 277
M + +TF+ L+ S + L C D+
Sbjct: 331 MISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG 390
Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
+ M + + S + DV +T MISG+ NG +L++F+ + V + PN +T+ S +
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
L AL +G E+H +K GF + +G ++I+MY+KC + A +F+ + +D+ SW
Sbjct: 451 IGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSW 510
Query: 398 NSMIAGYCQAGYCGKAYELFIKMQESDV-------------------------------- 425
NSMI Q+ A ++F +M S +
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK 570
Query: 426 ---PPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKN 482
+V + + LI Y + GN A+++F+ M ++N SWNS+IA G+
Sbjct: 571 HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK-----EKNIVSWNSIIAACGNHGKLK 625
Query: 483 NALGVFRKM-QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNS- 540
++L +F +M + S P+ +T L ++ +C ++ V E G RS+ +
Sbjct: 626 DSLCLFHEMVEKSGIRPDQITFLEIISSCCHV---GDVDE--GVRFFRSMTEDYGIQPQQ 680
Query: 541 -----LIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKS 594
++D + ++G + + M D W +L+ LH + L K
Sbjct: 681 EHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHK--NVELAEVASSKL 738
Query: 595 FGLKP-NRGTFLSIILAHSLA 614
L P N G ++ I AH+ A
Sbjct: 739 MDLDPSNSGYYVLISNAHANA 759
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 253/849 (29%), Positives = 414/849 (48%), Gaps = 106/849 (12%)
Query: 38 LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKL 97
L A V +I T G + R + L+ S+ ++ AR+L + ++E D +T +
Sbjct: 30 LQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQL---FDEISEPDKIARTTM 86
Query: 98 LSVYAKCGCLDDAREVFED----MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
+S Y G + AR VFE MR+ +Y +AMI +S + + LF M +G
Sbjct: 87 VSGYCASGDITLARGVFEKAPVCMRDTVMY--NAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 154 FPDDFLFPKILQACGNCGDFEAGKL-MHSLVIKLGMSCVRRVRNSVLAVYVKCGK----L 208
PD+F F +L D E + H+ +K G + V N++++VY KC L
Sbjct: 145 KPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSY 268
AR+ F+ + EKD +W +M++GY + G D L + M
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM------------------- 245
Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
D M++V + MISG+ G +AL++ + M G+ +
Sbjct: 246 ------DDNMKLV-------------AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDE 286
Query: 329 VTITSAISACTDLKALAMGMEIHSLAVK---MGFTDDVLVGNSLINMYSKCEELEAAERV 385
T S I AC L +G ++H+ ++ F D NSL+++Y KC + + A +
Sbjct: 287 FTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAI 342
Query: 386 FDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
F KM D+ ++WN L+SGY+ +G+
Sbjct: 343 -------------------------------FEKMPAKDL----VSWNALLSGYVSSGHI 367
Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
EA +F+ M + +N SW +I+G + G L +F M+ F P
Sbjct: 368 GEAKLIFKEMKE-----KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSG 422
Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
+ +CA L A ++ H +L+ +SSL N+LI YAK G + +R +F M D
Sbjct: 423 AIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLD 482
Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
++WN+LI HG A+D++++M G++P+R T L+++ A S AG+VD G+K F
Sbjct: 483 SVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFD 542
Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
S+ Y+I P +HY+ +IDL RSGK +A IE +P +P + IWEALL+ CR+HGN+
Sbjct: 543 SMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNM 602
Query: 686 DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV 745
+L ++A ++LF L P L+ ++A G+ E+ +VRKL R+ + WIE+
Sbjct: 603 ELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEM 662
Query: 746 KNLVYTFVTGGWSESYSDLLYSWLQNVPENVT--ARSSHSGLCIEEEE----KEEISGIH 799
+ V+TF+ S ++ +Y +LQ++ + + + + + E KE++ H
Sbjct: 663 ETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTH 722
Query: 800 SEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKN 859
SEK+A+AF L+ TIRI KN+R C CH +++S + +I L D K HHF+N
Sbjct: 723 SEKIAVAFGLMKLPPGT-TIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRN 781
Query: 860 GQCSCGDYW 868
G+CSCG++W
Sbjct: 782 GECSCGNFW 790
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 181/396 (45%), Gaps = 46/396 (11%)
Query: 36 GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
G EA+ ++ + + G ++ TY ++++AC + + L +++HA++ +
Sbjct: 265 GFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN 324
Query: 96 KLLSVYAKCGCLDDAREVFE-------------------------------DMRERNLYT 124
L+S+Y KCG D+AR +FE +M+E+N+ +
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384
Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
W MI + + E ++LF M ++G P D+ F +++C G + G+ H+ ++
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL 444
Query: 185 KLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHR 244
K+G N+++ +Y KCG + AR+ F +M D V+WN++I+ Q G EA
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVD 504
Query: 245 LFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL-GITPDVFTWTCMISGF 303
++++M ++ I+ +T ++ + + G D + ME++ I P + +I
Sbjct: 505 VYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLL 564
Query: 304 AQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT--- 360
++G+ S A + + + F P + +S C + ME+ +A F
Sbjct: 565 CRSGKFSDAESVIESLPF---KPTAEIWEALLSGCR----VHGNMELGIIAADKLFGLIP 617
Query: 361 --DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
D + L NM++ + E RV +++D+ V
Sbjct: 618 EHDGTYM--LLSNMHAATGQWEEVARVRKLMRDRGV 651
Score = 123 bits (308), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 187/388 (48%), Gaps = 17/388 (4%)
Query: 343 ALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIA 402
+L + +H + GF + N LI++Y K EL A ++FD I + D + +M++
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
GYC +G A +F K + + +N +I+G+ N + A++LF +M K++ K
Sbjct: 89 GYCASGDITLARGVFEKAPV--CMRDTVMYNAMITGFSHNNDGYSAINLFCKM-KHEGFK 145
Query: 463 RNTASWNSLIAGYQQLGQKNNALGVFR--KMQSSCFYPNCVT--ILSVLPACAYLVASNK 518
+ ++ S++AG + F ++S Y V+ ++SV CA +S
Sbjct: 146 PDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA---SSPS 202
Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK-DIITWNSLICGYV 577
+ V LE +++ Y K+G + +GM ++ +N++I GYV
Sbjct: 203 LLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYV 262
Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMI 637
GF+ AL++ +M S G++ + T+ S+I A + AG++ LGK+V +
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF 322
Query: 638 EHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFD 697
+ ++++ LY + GK +EA E MP + D W ALL+ G+I A L + +
Sbjct: 323 D--NSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFK---E 376
Query: 698 LEPGDVLIQRLILQIYAICGKPEDALKV 725
++ ++L +++ A G E+ LK+
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKL 404
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 233/712 (32%), Positives = 374/712 (52%), Gaps = 77/712 (10%)
Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
++I +I +A +L + R + L + +I+I Y L A+ + K ++S
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQ-SLSHTSASIVISIYTNLKLLHEALLLFKTLKS- 67
Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
P V W +I F S+AL F EM G P+ S + +CT + L G
Sbjct: 68 ---PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFG 124
Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKC-------------------------EELEA- 381
+H V++G D+ GN+L+NMY+K E+++A
Sbjct: 125 ESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAE 184
Query: 382 ----------AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT 431
RVF+++ KDV S+N++IAGY Q+G A + +M +D+ P+ T
Sbjct: 185 TCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244
Query: 432 WNVL---------------ISGY-IQNGNEDEA------VDLFQRMGKNDKVKR------ 463
+ + I GY I+ G + + VD++ + + + +R
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304
Query: 464 --NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKE 521
+ SWNSL+AGY Q G+ N AL +FR+M ++ P V SV+PACA+L + K+
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 522 IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGF 581
+HG VLR S++ + ++L+D Y+K GNI +R IFD M+ D ++W ++I G+ LHG
Sbjct: 365 LHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGH 424
Query: 582 WHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
H A+ LF++MK G+KPN+ F++++ A S G+VD F S+T+ Y + +EHY+
Sbjct: 425 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA 484
Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
A+ DL GR+GKLEEA FI M +EP S+W LL++C +H N++LA E++F ++
Sbjct: 485 AVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSE 544
Query: 702 DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY 761
++ L+ +YA G+ ++ K+R R+ R WIE+KN + FV+G S
Sbjct: 545 NMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPS 604
Query: 762 SDLLYSWLQNVPENVTAR---SSHSGLC--IEEEEKEEISGIHSEKLALAFALIGSSQAP 816
D + +L+ V E + + SG+ ++EE K E+ HSE+LA+AF +I +++
Sbjct: 605 MDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGII-NTEPG 663
Query: 817 HTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
TIR+ KNIR+C CH K++S + EI + D+ HHF G CSCGDYW
Sbjct: 664 TTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 163 bits (412), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 119/477 (24%), Positives = 214/477 (44%), Gaps = 82/477 (17%)
Query: 76 ARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
A++LHA + + ++S+Y L +A +F+ ++ + W ++I ++
Sbjct: 24 AKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQ 83
Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
+ + + F M G PD +FP +L++C D G+ +H +++LGM C
Sbjct: 84 SLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTG 143
Query: 196 NSVLAVYVKC---GKLIWARRFFESMDEKDGVAWNSMISGY-----FQIGENDEAHRLFD 247
N+++ +Y K G I F+ M ++ + + + F I D R+F+
Sbjct: 144 NALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGI---DSVRRVFE 200
Query: 248 KMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
M R++ VV++N +I Y Q G + A+ MV+ M + + PD FT + ++ F
Sbjct: 201 VMPRKD----VVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIF---- 252
Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
S+ +D+ K G EIH ++ G DV +G+
Sbjct: 253 --SEYVDVIK-----------------------------GKEIHGYVIRKGIDSDVYIGS 281
Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
SL++MY+K +E +ERVF + +D SWNS++AGY Q G +A LF +M + V P
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 341
Query: 428 NVITWNVLIS---------------GYIQNGN-------EDEAVDLFQRMGKNDKVKR-- 463
+ ++ +I GY+ G VD++ + G N K R
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCG-NIKAARKI 400
Query: 464 -------NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYL 513
+ SW ++I G+ G + A+ +F +M+ PN V ++VL AC+++
Sbjct: 401 FDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV 457
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 127/557 (22%), Positives = 222/557 (39%), Gaps = 127/557 (22%)
Query: 58 NTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKC------------ 104
N + ++L++C + +H F+ L + D++ L+++YAK
Sbjct: 106 NVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNV 165
Query: 105 -------------------GCL-----DDAREVFEDMRERNLYTWSAMIGAYSRDQRWRE 140
C+ D R VFE M +++ +++ +I Y++ + +
Sbjct: 166 FDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYED 225
Query: 141 VVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLA 200
+ + M L PD F +L D GK +H VI+ G+ + +S++
Sbjct: 226 ALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVD 285
Query: 201 VYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVT 260
+Y K ++ + R F + +DG++WNS+++GY Q G +EA RLF +M ++K G V
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 261 F------------------------------NILIRS-----YNQLGQCDVAMEMVKRME 285
F NI I S Y++ G A ++ RM
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 286 SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALA 345
L D +WT +I G A +G +A+ LF+EM GV PN V + ++AC+ +
Sbjct: 406 VL----DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV---- 457
Query: 346 MGMEIHSLAVKMGFTDDVL-VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
G D+ NS+ +Y +ELE V D++
Sbjct: 458 ------------GLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG-------------- 491
Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
+AG +AY KM V P W+ L+S + N + A + +++ D N
Sbjct: 492 -RAGKLEEAYNFISKMC---VEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVD--SEN 545
Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
++ + Y G+ + +M+ L PAC+++ NK HG
Sbjct: 546 MGAYVLMCNMYASNGRWKEMAKLRLRMRKKG--------LRKKPACSWIEMKNKT---HG 594
Query: 525 CVLRRSLESSLPVMNSL 541
V S + S P M+ +
Sbjct: 595 FV---SGDRSHPSMDKI 608
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 156/318 (49%), Gaps = 5/318 (1%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
+G +A+ ++ + T K T ++L + + +++H + + + DV++
Sbjct: 220 SGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYI 279
Query: 94 KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
+ L+ +YAK ++D+ VF + R+ +W++++ Y ++ R+ E + LF MV +
Sbjct: 280 GSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKV 339
Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
P F ++ AC + GK +H V++ G + ++++ +Y KCG + AR+
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399
Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
F+ M+ D V+W ++I G+ G EA LF++M R+ +K V F ++ + + +G
Sbjct: 400 IFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGL 459
Query: 274 CDVAMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
D A M + G+ ++ + + + G+ +A + +M V P G +
Sbjct: 460 VDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMC---VEPTGSVWS 516
Query: 333 SAISACTDLKALAMGMEI 350
+ +S+C+ K L + ++
Sbjct: 517 TLLSSCSVHKNLELAEKV 534
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 230/682 (33%), Positives = 364/682 (53%), Gaps = 37/682 (5%)
Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
NS++A Y AR+ F+ M +++ ++WN ++SGY + GE DEA ++FD M
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPER--- 108
Query: 256 LGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
VV++ L++ Y G+ DVA + +M + +WT M+ GF Q+GR A L
Sbjct: 109 -NVVSWTALVKGYVHNGKVDVAESLFWKMPE----KNKVSWTVMLIGFLQDGRIDDACKL 163
Query: 316 FKEMSFVGVMPNGVTI--TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMY 373
++ ++P+ I TS I + EI + V+ +++ Y
Sbjct: 164 YE------MIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERS----VITWTTMVTGY 213
Query: 374 SKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN 433
+ ++ A ++FD++ +K SW SM+ GY Q G A ELF M V P VI N
Sbjct: 214 GQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMP---VKP-VIACN 269
Query: 434 VLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
+ISG Q G +A +F M + RN ASW ++I +++ G + AL +F MQ
Sbjct: 270 AMISGLGQKGEIAKARRVFDSMKE-----RNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVY 553
P T++S+L CA L + + K++H ++R + + V + L+ Y K G +V
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 554 SRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG-LKPNRGTFLSIILAHS 612
S+ IFD SKDII WNS+I GY HG AL +F +M G KPN TF++ + A S
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 613 LAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
AGMV+ G K++ S+ + + P+ HY+ M+D+ GR+G+ EAME I+ M +EPD+++W
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVW 504
Query: 673 EALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLEREN 732
+LL ACR H +D+A ++L ++EP + L+ +YA G+ D ++RKL +
Sbjct: 505 GSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTR 564
Query: 733 TRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC------ 786
R S G W EV+N V+ F GG + + + + + + ++ C
Sbjct: 565 LVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHD 624
Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
++EEEK HSE+LA+A+AL+ S+ IR++KN+R+C CH K +S + EI
Sbjct: 625 VDEEEKVNSLKYHSERLAVAYALLKLSEGI-PIRVMKNLRVCSDCHTAIKIISKVKEREI 683
Query: 847 FLADSKCLHHFKNGQCSCGDYW 868
L D+ HHF+NG+CSC DYW
Sbjct: 684 ILRDANRFHHFRNGECSCKDYW 705
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 140/534 (26%), Positives = 241/534 (45%), Gaps = 61/534 (11%)
Query: 9 FQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACI 68
++ +S R THL + G+++EA + DS ++ +++ +++
Sbjct: 7 LRRTYSTTIPPPTANVRITHLSRI---GKIHEARKLFDSCDSKSI----SSWNSMVAGYF 59
Query: 69 DSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAM 128
+ ARKL + + + ++ L+S Y K G +D+AR+VF+ M ERN+ +W+A+
Sbjct: 60 ANLMPRDARKL---FDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTAL 116
Query: 129 IGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGM 188
+ Y + + LF+ M + + LQ G D A KL + K +
Sbjct: 117 VKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQD-GRIDD--ACKLYEMIPDKDNI 173
Query: 189 SCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
+ R S++ K G++ AR F+ M E+ + W +M++GY Q D+A ++FD
Sbjct: 174 A-----RTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228
Query: 249 MCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR 308
M + V++ ++ Y Q G+ + A E+ E + + P V MISG Q G
Sbjct: 229 MPEKT----EVSWTSMLMGYVQNGRIEDAEEL---FEVMPVKP-VIACNAMISGLGQKGE 280
Query: 309 TS-------------------------------QALDLFKEMSFVGVMPNGVTITSAISA 337
+ +ALDLF M GV P T+ S +S
Sbjct: 281 IAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340
Query: 338 CTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSW 397
C L +L G ++H+ V+ F DV V + L+ MY KC EL ++ +FD KD+ W
Sbjct: 341 CASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMW 400
Query: 398 NSMIAGYCQAGYCGKAYELFIKMQES-DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMG 456
NS+I+GY G +A ++F +M S PN +T+ +S G +E + +++ M
Sbjct: 401 NSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESME 460
Query: 457 KNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
VK TA + ++ + G+ N A+ + M P+ S+L AC
Sbjct: 461 SVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSM---TVEPDAAVWGSLLGAC 511
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 150/319 (47%), Gaps = 32/319 (10%)
Query: 365 VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
N I S+ ++ A ++FD K + SWNSM+AGY A +LF +M +
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR- 77
Query: 425 VPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNA 484
N+I+WN L+SGY++NG DEA +F M +RN SW +L+ GY G+ + A
Sbjct: 78 ---NIISWNGLVSGYMKNGEIDEARKVFDLMP-----ERNVVSWTALVKGYVHNGKVDVA 129
Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM-NSLID 543
+F KM V ++ L ++ + C L + + S+I
Sbjct: 130 ESLFWKMPEKNKVSWTVMLIGFL-------QDGRIDD--ACKLYEMIPDKDNIARTSMIH 180
Query: 544 TYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGT 603
K G + +R IFD MS + +ITW +++ GY + A +FD M + +
Sbjct: 181 GLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVS 236
Query: 604 FLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDM 663
+ S+++ + G ++ +++F E + P+I +AMI G+ G++ +A + M
Sbjct: 237 WTSMLMGYVQNGRIEDAEELF----EVMPVKPVIA-CNAMISGLGQKGEIAKARRVFDSM 291
Query: 664 PIEPDSSIWEALLTACRIH 682
D+S W+ T +IH
Sbjct: 292 KERNDAS-WQ---TVIKIH 306
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 526 VLRRSLESSLP--VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
+LRR+ +++P N I ++ G I +R +FD SK I +WNS++ GY +
Sbjct: 6 LLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPR 65
Query: 584 AALDLFDQMKSFGLKPNRG--TFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYS 641
A LFD+M P+R ++ ++ + G +D +KVF + E + ++
Sbjct: 66 DARKLFDEM------PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV-----SWT 114
Query: 642 AMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
A++ Y +GK++ A MP E + W +L G ID A +L+++ P
Sbjct: 115 ALVKGYVHNGKVDVAESLFWKMP-EKNKVSWTVMLIGFLQDGRIDDAC----KLYEMIPD 169
Query: 702 DVLIQRLILQIYAIC--GKPEDALKV 725
I R + I+ +C G+ ++A ++
Sbjct: 170 KDNIARTSM-IHGLCKEGRVDEAREI 194
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 219/647 (33%), Positives = 344/647 (53%), Gaps = 70/647 (10%)
Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGME 349
P+ F W +I +A ++ F +M S PN T I A ++ +L++G
Sbjct: 93 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQS 152
Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
+H +AVK DV V NSLI+ Y C +L++A +VF IK+KDV SWNSMI G+ Q G
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 410 CGKAYELFIKMQ-----------------------------------ESDVPPNVITWNV 434
KA ELF KM+ E+ V N+ N
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKV--------------------------KRNTASW 468
++ Y + G+ ++A LF M + D V +++ +W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 469 NSLIAGYQQLGQKNNALGVFRKMQ-SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVL 527
N+LI+ Y+Q G+ N AL VF ++Q N +T++S L ACA + A + IH +
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 528 RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALD 587
+ + + V ++LI Y+K G++ SR +F+ + +D+ W+++I G +HG + A+D
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 588 LFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
+F +M+ +KPN TF ++ A S G+VD + +F + Y I+P +HY+ ++D+
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
GRSG LE+A++FIE MPI P +S+W ALL AC+IH N++LA +A RL +LEP +
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572
Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
L+ IYA GK E+ ++RK R + G IE+ +++ F++G + S+ +Y
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632
Query: 768 WLQNVPENVTARSSHSGLC-----IEEEE-KEEISGIHSEKLALAFALIGSSQAPHTIRI 821
L V E + + + IEEEE KE+ +HSEKLA+ + LI S++AP IR+
Sbjct: 633 KLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLI-STEAPKVIRV 691
Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
+KN+R+C CH AK +S ++ EI + D HHF+NGQCSC D+W
Sbjct: 692 IKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 221/470 (47%), Gaps = 70/470 (14%)
Query: 56 RRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYA--KCGCLDDARE 112
R+ +I+L++ C+ S+ ++ H + T D + +KL ++ A L+ AR+
Sbjct: 29 ERSRHISLIERCV---SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARK 85
Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCG 171
VF+++ + N + W+ +I AY+ + F MV + +P+ + FP +++A
Sbjct: 86 VFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS 145
Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
G+ +H + +K + V NS++ Y CG L A + F ++ EKD V+WNSMI+
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMIN 205
Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTF------------------------------ 261
G+ Q G D+A LF KM E++K VT
Sbjct: 206 GFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNV 265
Query: 262 -----NILIRSYNQLGQCDVAMEMVKRMES-------------------------LGITP 291
N ++ Y + G + A + ME L P
Sbjct: 266 NLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMP 325
Query: 292 --DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP-NGVTITSAISACTDLKALAMGM 348
D+ W +IS + QNG+ ++AL +F E+ M N +T+ S +SAC + AL +G
Sbjct: 326 QKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
IHS K G + V ++LI+MYSKC +LE + VF+ ++ +DV+ W++MI G G
Sbjct: 386 WIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHG 445
Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
+A ++F KMQE++V PN +T+ + G DEA LF +M N
Sbjct: 446 CGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 495
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust.
Identities = 250/770 (32%), Positives = 392/770 (50%), Gaps = 81/770 (10%)
Query: 170 CGDFEAGKLMHS-LVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS 228
C + ++ K +H+ LV+ + V + ++ +Y G + AR F+ + +D AWN
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVC-ISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNL 122
Query: 229 MISGYFQIGENDEAHRLFD-------------------KMCREEI----------KLG-- 257
MISGY + G + E R F K CR I K G
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFM 182
Query: 258 --VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDL 315
V LI Y++ A + M D+ +W MISG+ Q+G +AL L
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMP----VRDMGSWNAMISGYCQSGNAKEALTL 238
Query: 316 FKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK 375
+ + + VT+ S +SACT+ G+ IHS ++K G ++ V N LI++Y++
Sbjct: 239 SNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE 294
Query: 376 CEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVL 435
L ++VFD + +D+ SWNS+I Y +A LF +M+ S + P+ +T L
Sbjct: 295 FGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL 354
Query: 436 ISGYIQNGN------------------ED-----EAVDLFQRMGKNDKVK--------RN 464
S Q G+ ED V ++ ++G D + +
Sbjct: 355 ASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTD 414
Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSC-FYPNCVTILSVLPACAYLVASNKVKEIH 523
SWN++I+GY Q G + A+ ++ M+ N T +SVLPAC+ A + ++H
Sbjct: 415 VISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
G +L+ L + V+ SL D Y K G + + ++F + + + WN+LI + HG
Sbjct: 475 GRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 534
Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
A+ LF +M G+KP+ TF++++ A S +G+VD G+ F + Y I P ++HY M
Sbjct: 535 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCM 594
Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
+D+YGR+G+LE A++FI+ M ++PD+SIW ALL+ACR+HGN+DL +A E LF++EP V
Sbjct: 595 VDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHV 654
Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
L+ +YA GK E ++R + R + G +EV N V F TG + +
Sbjct: 655 GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYE 714
Query: 764 LLY---SWLQNVPENVTARSSHSGLC--IEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
+Y + LQ + + H + +E++EKE I HSE+LA+AFALI ++ A T
Sbjct: 715 EMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALI-ATPAKTT 773
Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
IRI KN+R+C CH K++S + EI + DS HHFKNG CSCGDYW
Sbjct: 774 IRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 156/589 (26%), Positives = 266/589 (45%), Gaps = 83/589 (14%)
Query: 62 NLLQACIDSNSIHLARKLHAFLNLVTEI-DVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
L + C + S A+ LHA L + +I +V + KL+++Y G + AR F+ ++ R
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFL-MVQDGLFPDDFLFPKILQACGNCGDFEAGKLM 179
++Y W+ MI Y R EV+ F L M+ GL PD FP +L+AC D G +
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKI 172
Query: 180 HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEN 239
H L +K G V S++ +Y + + AR F+ M +D +WN+MISGY Q G
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 240 DEAHRLFDKM--------------CRE-------------EIKLG----VVTFNILIRSY 268
EA L + + C E IK G + N LI Y
Sbjct: 233 KEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 269 NQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNG 328
+ G+ ++ RM D+ +W +I + N + +A+ LF+EM + P+
Sbjct: 293 AEFGRLRDCQKVFDRM----YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDC 348
Query: 329 VTITSAISACTDLKALAMGMEIHSLAVKMG-FTDDVLVGNSLINMYSKCEELEAAERVFD 387
+T+ S S + L + + ++ G F +D+ +GN+++ MY+K +++A VF+
Sbjct: 349 LTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFN 408
Query: 388 MIKDKDVYSWNSMIAGYCQAGYCGKAYELF-IKMQESDVPPNVITWNVLISGYIQNGNED 446
+ + DV SWN++I+GY Q G+ +A E++ I +E ++ N TW ++ Q G
Sbjct: 409 WLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALR 468
Query: 447 EAVDLFQRMGKND-----------------------------KVKR-NTASWNSLIAGYQ 476
+ + L R+ KN ++ R N+ WN+LIA +
Sbjct: 469 QGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHG 528
Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCV----LRRSLE 532
G A+ +F++M P+ +T +++L AC++ S V E C +
Sbjct: 529 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSH---SGLVDEGQWCFEMMQTDYGIT 585
Query: 533 SSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLICGYVLHG 580
SL ++D Y ++G + + MS D W +L+ +HG
Sbjct: 586 PSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 634
Score = 179 bits (454), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 144/520 (27%), Positives = 234/520 (45%), Gaps = 54/520 (10%)
Query: 32 LCGNGRLNEAITVLDSIA----TQGAKVRRNTYINLLQAC---IDSNSIHLARKLHAFLN 84
+ G GR + V+ + + G T+ ++L+AC ID N IH F+
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFM- 182
Query: 85 LVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVEL 144
DV+V L+ +Y++ + +AR +F++M R++ +W+AMI Y + +E
Sbjct: 183 ----WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA--- 235
Query: 145 FFLMVQDGLFP-DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
L + +GL D +L AC GDF G +HS IK G+ V N ++ +Y
Sbjct: 236 --LTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYA 293
Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
+ G+L ++ F+ M +D ++WNS+I Y + A LF +M I+ +T
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
Query: 264 LIRSYNQLG--------------------QCDVAMEMVKRMESLGIT------------P 291
L +QLG + +V LG+
Sbjct: 354 LASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNT 413
Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEI 350
DV +W +ISG+AQNG S+A++++ M G + N T S + AC+ AL GM++
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
H +K G DV V SL +MY KC LE A +F I + WN++IA + G+
Sbjct: 474 HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHG 533
Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
KA LF +M + V P+ IT+ L+S +G DE F+ M + + + +
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC 593
Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
++ Y + GQ AL + M P+ ++L AC
Sbjct: 594 MVDMYGRAGQLETALKFIKSMS---LQPDASIWGALLSAC 630
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/616 (33%), Positives = 334/616 (54%), Gaps = 20/616 (3%)
Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
L+R+Y L A ++ + +V MI + NG + + +F M
Sbjct: 80 LMRAYASLKDVASARKVFDEIPE----RNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
V P+ T + AC+ + +G +IH A K+G + + VGN L++MY KC L A
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
V D + +DV SWNS++ GY Q A E+ +M+ + + T L+
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 444 NED--EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
E+ D+F +MGK ++ SWN +I Y + A+ ++ +M++ F P+ V
Sbjct: 256 TENVMYVKDMFFKMGK-----KSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAV 310
Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGM 561
+I SVLPAC A + K+IHG + R+ L +L + N+LID YAK G + +R +F+ M
Sbjct: 311 SITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM 370
Query: 562 SSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGK 621
S+D+++W ++I Y G A+ LF +++ GL P+ F++ + A S AG+++ G+
Sbjct: 371 KSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430
Query: 622 KVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRI 681
F +T+ Y+I P +EH + M+DL GR+GK++EA FI+DM +EP+ +W ALL ACR+
Sbjct: 431 SCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRV 490
Query: 682 HGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQC 741
H + D+ +LA ++LF L P L+ IYA G+ E+ +R + + + + G
Sbjct: 491 HSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550
Query: 742 WIEVKNLVYTFVTGGWSESYSDLLYSWL----QNVPENVTARSSHSGLC-IEEEEKEEIS 796
+EV +++TF+ G S SD +Y L + + E S S L +EEE+KE
Sbjct: 551 NVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHL 610
Query: 797 GIHSEKLALAFALIGSSQ----APHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
+HSEKLA+ FAL+ + + + +TIRI KN+R+C CH AK +S + EI + D+
Sbjct: 611 AVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTN 670
Query: 853 CLHHFKNGQCSCGDYW 868
H F+ G CSCGDYW
Sbjct: 671 RFHVFRFGVCSCGDYW 686
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 150/533 (28%), Positives = 251/533 (47%), Gaps = 36/533 (6%)
Query: 96 KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFP 155
KL+ YA + AR+VF+++ ERN+ + MI +Y + + E V++F M + P
Sbjct: 79 KLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRP 138
Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
D + FP +L+AC G G+ +H K+G+S V N ++++Y KCG L AR
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVL 198
Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCD 275
+ M +D V+WNS++ GY Q D+A + +M +I T L+ + + +
Sbjct: 199 DEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN 258
Query: 276 VAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
V VK M + +W MI + +N +A++L+ M G P+ V+ITS +
Sbjct: 259 VMY--VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
AC D AL++G +IH + ++L+ N+LI+MY+KC LE A VF+ +K +DV
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVV 376
Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
SW +MI+ Y +G A LF K+Q+S + P+ I + ++ G +E F+ M
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 436
Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY--- 512
+ K+ T L LG+ +R +Q PN ++L AC
Sbjct: 437 TDHYKI---TPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSD 493
Query: 513 ----LVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDI-- 566
L+A++K+ ++ +S V+ L + YAK+G I + M SK +
Sbjct: 494 TDIGLLAADKLFQL------APEQSGYYVL--LSNIYAKAGRWEEVTNIRNIMKSKGLKK 545
Query: 567 ------ITWNSLICGYVLHGFWHAALD--------LFDQMKSFGLKPNRGTFL 605
+ N +I +++ H D L +MK G P+ + L
Sbjct: 546 NPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESAL 598
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 200/451 (44%), Gaps = 33/451 (7%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFV 93
NG E + V ++ + T+ +L+AC S +I + RK+H V +FV
Sbjct: 118 NGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFV 177
Query: 94 KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
L+S+Y KCG L +AR V ++M R++ +W++++ Y+++QR+ + +E+ M +
Sbjct: 178 GNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKI 237
Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
D +L A N E + + K+G + N ++ VY+K + A
Sbjct: 238 SHDAGTMASLLPAVSNTTT-ENVMYVKDMFFKMGKKSLVS-WNVMIGVYMKNAMPVEAVE 295
Query: 214 FFESMD----EKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
+ M+ E D V+ S++ ++ + R+++ ++ N LI Y
Sbjct: 296 LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYA 355
Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
+ G + A ++ + M+S DV +WT MIS + +GR A+ LF ++ G++P+ +
Sbjct: 356 KCGCLEKARDVFENMKS----RDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSL------INMYSKCEELEAAE 383
+ ++AC+ L G L TD + L +++ + +++ A
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKL-----MTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466
Query: 384 R-VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD----VPPNVITWNVLISG 438
R + DM + + W +++ G C + I + +D + P + VL+S
Sbjct: 467 RFIQDMSMEPNERVWGALL------GACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSN 520
Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
E V + + K+ +K+N + N
Sbjct: 521 IYAKAGRWEEVTNIRNIMKSKGLKKNPGASN 551
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/479 (21%), Positives = 201/479 (41%), Gaps = 56/479 (11%)
Query: 172 DFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMIS 231
D + +HS +I + C + ++ Y + AR+ F+ + E++ + N MI
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 232 GYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITP 291
Y G E ++F MC ++ TF ++++ + G + ++ +G++
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 292 -------------------------------DVFTWTCMISGFAQNGRTSQALDLFKEMS 320
DV +W ++ G+AQN R AL++ +EM
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSK-CEEL 379
V + + T+ S + A ++ + M + + KMG ++ N +I +Y K +
Sbjct: 234 SVKISHDAGTMASLLPAVSNTTTENV-MYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPV 291
Query: 380 EAAERVFDMIKD---KDVYSWNSMIA--GYCQAGYCGKAYELFIKMQESDVPPNVITWNV 434
EA E M D D S S++ G A GK +I+ ++ + PN++ N
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK--LIPNLLLENA 349
Query: 435 LISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
LI Y + G ++A D+F+ M D V SW ++I+ Y G+ +A+ +F K+Q S
Sbjct: 350 LIDMYAKCGCLEKARDVFENMKSRDVV-----SWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVL----RRSLESSLPVMNSLIDTYAKSGN 550
P+ + ++ L AC++ + ++E C + L + ++D ++G
Sbjct: 405 GLVPDSIAFVTTLAACSH---AGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGK 461
Query: 551 IVYSRTIFDGMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSII 608
+ + MS + W +L+ +H L D++ F L P + + ++
Sbjct: 462 VKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL--FQLAPEQSGYYVLL 518
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLP 536
+L QK+ VF Q YP+ T+ + +H ++ L +
Sbjct: 32 ELDQKSPQETVFLLGQVLDTYPDIRTL----------------RTVHSRIILEDLRCNSS 75
Query: 537 VMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFG 596
+ L+ YA ++ +R +FD + +++I N +I YV +GF+ + +F M
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 597 LKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
++P+ TF ++ A S +G + +G+K+ S T+ + + + ++ +YG+ G L EA
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV-GLSSTLFVGNGLVSMYGKCGFLSEA 194
Query: 657 MEFIEDMPIEPDSSIWEALLTA 678
+++M D W +L+
Sbjct: 195 RLVLDEMS-RRDVVSWNSLVVG 215
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 248/864 (28%), Positives = 418/864 (48%), Gaps = 129/864 (14%)
Query: 50 TQGAKVRRNTYINLLQACIDSNSI-HLARK-----LHAFLNLVTEIDVFVKTKLLSVYAK 103
T A + +NTY++ + S SI HLA+ LH F N D+ + TKL +
Sbjct: 13 TTAALISKNTYLDFFK---RSTSISHLAQTHAQIILHGFRN-----DISLLTKLTQRLSD 64
Query: 104 CGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF-FLMVQDGLFPDDFLFPK 162
G + AR++F ++ +++ ++ ++ +S ++ + +F L L P+ +
Sbjct: 65 LGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAF 124
Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKD 222
+ A D AG+++H + G C + +
Sbjct: 125 AISAASGFRDDRAGRVIHGQAVVDG-----------------C--------------DSE 153
Query: 223 GVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVK 282
+ ++++ YF+ ++A ++FD+M +
Sbjct: 154 LLLGSNIVKMYFKFWRVEDARKVFDRMPEK------------------------------ 183
Query: 283 RMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDL 341
D W MISG+ +N +++ +F+++ + + T+ + A +L
Sbjct: 184 ---------DTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAEL 234
Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMI 401
+ L +GM+IHSLA K G V I++YSKC +++ +F + D+ ++N+MI
Sbjct: 235 QELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMI 294
Query: 402 AGYCQAGYCGKAYELFIKMQESD-----------VPPN-------VITWNVLISGYIQNG 443
GY G + LF ++ S VP + I L S ++ +
Sbjct: 295 HGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHA 354
Query: 444 NEDEAVD-LFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
+ A+ ++ ++ + ++ +++ SWN++I+GY Q G +A+ +FR+MQ S
Sbjct: 355 SVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKS 414
Query: 495 CFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
F PN VTI +L ACA L A + K +H V ESS+ V +LI YAK G+I +
Sbjct: 415 EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEA 474
Query: 555 RTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLA 614
R +FD M+ K+ +TWN++I GY LHG AL++F +M + G+ P TFL ++ A S A
Sbjct: 475 RRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHA 534
Query: 615 GMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
G+V G ++F S+ Y P ++HY+ M+D+ GR+G L+ A++FIE M IEP SS+WE
Sbjct: 535 GLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWET 594
Query: 675 LLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTR 734
LL ACRIH + +LA E+LF+L+P +V L+ I++ A VR+ ++
Sbjct: 595 LLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKL 654
Query: 735 RNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV----------PENVTARSSHSG 784
+ G IE+ + F +G S +Y L+ + PE A
Sbjct: 655 AKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHD--- 711
Query: 785 LCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHC 844
+EEEE+E + +HSE+LA+AF LI + IRI+KN+R+C+ CH K +S +
Sbjct: 712 --VEEEERELMVKVHSERLAIAFGLIATEPGTE-IRIIKNLRVCLDCHTVTKLISKITER 768
Query: 845 EIFLADSKCLHHFKNGQCSCGDYW 868
I + D+ HHFK+G CSCGDYW
Sbjct: 769 VIVVRDANRFHHFKDGVCSCGDYW 792
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 146/308 (47%), Gaps = 12/308 (3%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL---NLVTEIDV 91
NG ++++ + GA++R +T ++L+ S + L +H + N ++ V
Sbjct: 300 NGETELSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLIYAIHGYCLKSNFLSHASV 356
Query: 92 FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
T L +VY+K ++ AR++F++ E++L +W+AMI Y+++ + + LF M +
Sbjct: 357 --STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKS 414
Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
P+ IL AC G GK +H LV V +++ +Y KCG + A
Sbjct: 415 EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEA 474
Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
RR F+ M +K+ V WN+MISGY G+ EA +F +M I VTF ++ + +
Sbjct: 475 RRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHA 534
Query: 272 GQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
G E+ M G P V + CM+ + G +AL + MS + P
Sbjct: 535 GLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMS---IEPGSSV 591
Query: 331 ITSAISAC 338
+ + AC
Sbjct: 592 WETLLGAC 599
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 359 bits (922), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 221/701 (31%), Positives = 359/701 (51%), Gaps = 61/701 (8%)
Query: 204 KCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNI 263
+ GK+ AR+FF+S+ K +WNS++SGYF G EA +LFD+M VV++N
Sbjct: 29 RIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----NVVSWNG 84
Query: 264 LIRSY--NQLGQCDVAMEMVKRMESLGITPD--VFTWTCMISGFAQNGRTSQALDLFKEM 319
L+ Y N++ +V+ + P+ V +WT M+ G+ Q G +A LF M
Sbjct: 85 LVSGYIKNRM--------IVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM 136
Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
N V+ T D + +++ M DV+ ++I + +
Sbjct: 137 P----ERNEVSWTVMFGGLIDDGRIDKARKLYD----MMPVKDVVASTNMIGGLCREGRV 188
Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
+ A +FD +++++V +W +MI GY Q A +LF M E ++W ++ GY
Sbjct: 189 DEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGY 244
Query: 440 IQNGNEDEAVDLFQRM------------------GKNDKVKR--------NTASWNSLIA 473
+G ++A + F+ M G+ K +R + A+W +I
Sbjct: 245 TLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIK 304
Query: 474 GYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLES 533
Y++ G + AL +F +MQ P+ +++S+L CA L + +++H ++R +
Sbjct: 305 AYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDD 364
Query: 534 SLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMK 593
+ V + L+ Y K G +V ++ +FD SSKDII WNS+I GY HG AL +F +M
Sbjct: 365 DVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP 424
Query: 594 SFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
S G PN+ T ++I+ A S AG ++ G ++F S+ + + P +EHYS +D+ GR+G++
Sbjct: 425 SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQV 484
Query: 654 EEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIY 713
++AME IE M I+PD+++W ALL AC+ H +DLA +A ++LF+ EP + L+ I
Sbjct: 485 DKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSIN 544
Query: 714 AICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP 773
A K D VRK R N G WIEV V+ F GG + +
Sbjct: 545 ASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKT 604
Query: 774 ENVTARSSHSGLC------IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRM 827
+ + + +S C ++EEEK + HSE+LA+A+ L+ + IR++KN+R+
Sbjct: 605 DGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGV-PIRVMKNLRV 663
Query: 828 CVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
C CH K +S + EI L D+ HHF NG+CSC DYW
Sbjct: 664 CGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 172 bits (437), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 234/502 (46%), Gaps = 49/502 (9%)
Query: 36 GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKT 95
G++NEA DS+ + ++ +++ + AR+L + ++E +V
Sbjct: 31 GKINEARKFFDSLQFKAI----GSWNSIVSGYFSNGLPKEARQL---FDEMSERNVVSWN 83
Query: 96 KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ----- 150
L+S Y K + +AR VFE M ERN+ +W+AM+ Y ++ E LF+ M +
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVS 143
Query: 151 -----DGLFPD----------DFLFPKILQACGNC--GDFEAGKLMHSLVIKLGMSCVRR 193
GL D D + K + A N G G++ + +I M R
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEM----R 199
Query: 194 VRNSV-----LAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDK 248
RN V + Y + ++ AR+ FE M EK V+W SM+ GY G ++A F+
Sbjct: 200 ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEV 259
Query: 249 MCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGR 308
M + V+ N +I + ++G+ A + ME D TW MI + + G
Sbjct: 260 MPMKP----VIACNAMIVGFGEVGEISKARRVFDLMED----RDNATWRGMIKAYERKGF 311
Query: 309 TSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNS 368
+ALDLF +M GV P+ ++ S +S C L +L G ++H+ V+ F DDV V +
Sbjct: 312 ELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASV 371
Query: 369 LINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPN 428
L+ MY KC EL A+ VFD KD+ WNS+I+GY G +A ++F +M S PN
Sbjct: 372 LMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPN 431
Query: 429 VITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
+T +++ G +E +++F+ M V ++ + + GQ + A+ +
Sbjct: 432 KVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMEL- 490
Query: 489 RKMQSSCFYPNCVTILSVLPAC 510
++S P+ ++L AC
Sbjct: 491 --IESMTIKPDATVWGALLGAC 510
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 194/448 (43%), Gaps = 55/448 (12%)
Query: 59 TYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
++ + ID I ARKL+ +++ DV T ++ + G +D+AR +F++MR
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLY---DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMR 199
Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE-AGK 177
ERN+ TW+ MI Y ++ R +LF +M + + + +L G E A +
Sbjct: 200 ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEE 255
Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
+ +K ++C N+++ + + G++ ARR F+ M+++D W MI Y + G
Sbjct: 256 FFEVMPMKPVIAC-----NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKG 310
Query: 238 ENDEAHRLFDKMCREEIKLG-----------------------------------VVTFN 262
EA LF +M ++ ++ V +
Sbjct: 311 FELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVAS 370
Query: 263 ILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFV 322
+L+ Y + G+ A + R S D+ W +ISG+A +G +AL +F EM
Sbjct: 371 VLMTMYVKCGELVKAKLVFDRFSS----KDIIMWNSIISGYASHGLGEEALKIFHEMPSS 426
Query: 323 GVMPNGVTITSAISACTDLKALAMGMEI-HSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
G MPN VT+ + ++AC+ L G+EI S+ K T V + ++M + +++
Sbjct: 427 GTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDK 486
Query: 382 A-ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYI 440
A E + M D W +++ G C+ E+ K + P N T+ +L S
Sbjct: 487 AMELIESMTIKPDATVWGALL-GACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINA 545
Query: 441 QNGNEDEAVDLFQRMGKNDKVKRNTASW 468
+ + + M N+ K SW
Sbjct: 546 SRSKWGDVAVVRKNMRTNNVSKFPGCSW 573
Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 165/342 (48%), Gaps = 49/342 (14%)
Query: 370 INMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNV 429
I+ S+ ++ A + FD ++ K + SWNS+++GY G +A +LF +M E NV
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSER----NV 79
Query: 430 ITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFR 489
++WN L+SGYI+N EA ++F+ M +RN SW +++ GY Q G A +F
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMP-----ERNVVSWTAMVKGYMQEGMVGEAESLFW 134
Query: 490 KMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMN-----SLIDT 544
+M N V+ + L+ ++ + R L +PV + ++I
Sbjct: 135 RMPER----NEVSWTVMFGG---LIDDGRIDKA------RKLYDMMPVKDVVASTNMIGG 181
Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
+ G + +R IFD M ++++TW ++I GY + A LF+ M + ++
Sbjct: 182 LCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMP----EKTEVSW 237
Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
S++L ++L+G ++ ++ F E + P+I +AMI +G G++ +A D+
Sbjct: 238 TSMLLGYTLSGRIEDAEEFF----EVMPMKPVIA-CNAMIVGFGEVGEISKARRVF-DLM 291
Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQ 706
+ D++ W ++ A G F+LE D+ Q
Sbjct: 292 EDRDNATWRGMIKAYERKG------------FELEALDLFAQ 321
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 357 bits (915), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 225/724 (31%), Positives = 361/724 (49%), Gaps = 68/724 (9%)
Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
A + F+ M++ D WN MI G+ G EA + + +M +K T+ +I+S
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 271 LGQCDVAMEMVKRMESLGITPDVF-------------------------------TWTCM 299
+ + ++ + LG DV+ +W M
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGF 359
ISG+ G +L LFKEM G P+ + SA+ AC+ + + MG EIH AV+
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 360 -TDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFI 418
T DV+V S+++MYSK E+ AER+F+ + +++ +WN MI Y + G A+ F
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 419 KMQESD-VPPNVIT-WNVLISGYIQNGN-----------------EDEAVDLFQRMGK-- 457
KM E + + P+VIT N+L + I G E +D++ G+
Sbjct: 323 KMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLK 382
Query: 458 ------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
+ ++N SWNS+IA Y Q G+ +AL +F+++ S P+ TI S+LPA A
Sbjct: 383 SAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYA 442
Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
++ ++ +EIH +++ S+ ++NSL+ YA G++ +R F+ + KD+++WNS
Sbjct: 443 ESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNS 502
Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
+I Y +HGF ++ LF +M + + PN+ TF S++ A S++GMVD G + F S+ Y
Sbjct: 503 IIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREY 562
Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
I P IEHY M+DL GR+G A F+E+MP P + IW +LL A R H +I +A A
Sbjct: 563 GIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFA 622
Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
E++F +E + L+L +YA G+ ED +++ L + + +E K +
Sbjct: 623 AEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHV 682
Query: 752 FVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEI-------SGIHSEKLA 804
F G S ++ +Y L V V + C+ E + HS +LA
Sbjct: 683 FTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVH-CVSRLRPETLVKSRSNSPRRHSVRLA 741
Query: 805 LAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSC 864
F LI S++ + + N R+C CHE + S + EI + DSK HHF NG+CSC
Sbjct: 742 TCFGLI-STETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSC 800
Query: 865 GDYW 868
G+YW
Sbjct: 801 GNYW 804
Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/489 (27%), Positives = 230/489 (47%), Gaps = 85/489 (17%)
Query: 95 TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
T+ L +A ++DA ++F++M + + + W+ MI ++ + E V+ + MV G+
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
D F +P ++++ E GK +H++VIKLG V NS++++Y+K G A +
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------------- 249
FE M E+D V+WNSMISGY +G+ + LF +M
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 250 ----------CREEIKLG-VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTC 298
R I+ G V+ ++ Y++ G+ A + M I ++ W
Sbjct: 248 KMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM----IQRNIVAWNV 303
Query: 299 MISGFAQNGRTSQALDLFKEMSFV-GVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
MI +A+NGR + A F++MS G+ P+ +T + + A A+ G IH A++
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRR 359
Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
GF +++ +LI+MY +C +L++AE +FD + +K+V SWNS+IA Y Q G A ELF
Sbjct: 360 GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELF 419
Query: 418 IKMQESDVPP-----------------------------------NVITWNVLISGYIQN 442
++ +S + P N I N L+ Y
Sbjct: 420 QELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMC 479
Query: 443 GNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
G+ ++A F N + ++ SWNS+I Y G ++ +F +M +S PN T
Sbjct: 480 GDLEDARKCF-----NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKST 534
Query: 503 ILSVLPACA 511
S+L AC+
Sbjct: 535 FASLLAACS 543
Score = 189 bits (481), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 143/504 (28%), Positives = 236/504 (46%), Gaps = 41/504 (8%)
Query: 40 EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLL 98
EA+ + G K TY ++++ +S+ +K+HA + L DV+V L+
Sbjct: 113 EAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLI 172
Query: 99 SVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDF 158
S+Y K GC DA +VFE+M ER++ +W++MI Y + LF M++ G PD F
Sbjct: 173 SLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRF 232
Query: 159 LFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVR-RVRNSVLAVYVKCGKLIWARRFFES 217
L AC + + GK +H ++ + V S+L +Y K G++ +A R F
Sbjct: 233 STMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNG 292
Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-IKLGVVTF--------------- 261
M +++ VAWN MI Y + G +A F KM + ++ V+T
Sbjct: 293 MIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTI 352
Query: 262 ----------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQ 305
LI Y + GQ A + RM +V +W +I+ + Q
Sbjct: 353 HGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAE----KNVISWNSIIAAYVQ 408
Query: 306 NGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLV 365
NG+ AL+LF+E+ ++P+ TI S + A + +L+ G EIH+ VK + + ++
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468
Query: 366 GNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
NSL++MY+ C +LE A + F+ I KDV SWNS+I Y G+ + LF +M S V
Sbjct: 469 LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV 528
Query: 426 PPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNAL 485
PN T+ L++ +G DE + F+ M + + + ++ +G+ N
Sbjct: 529 NPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCML---DLIGRTGNFS 585
Query: 486 GVFRKMQSSCFYPNCVTILSVLPA 509
R ++ F P S+L A
Sbjct: 586 AAKRFLEEMPFVPTARIWGSLLNA 609
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 189/437 (43%), Gaps = 19/437 (4%)
Query: 35 NGRLNEAITVLDSIATQ-GAKVRRNTYINLL--QACIDSNSIHLARKLHAFLNLVTEIDV 91
NGR+ +A ++ Q G + T INLL A ++ +IH FL +
Sbjct: 311 NGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLP-----HM 365
Query: 92 FVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
++T L+ +Y +CG L A +F+ M E+N+ +W+++I AY ++ + +ELF +
Sbjct: 366 VLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDS 425
Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWA 211
L PD IL A G+ +H+ ++K + NS++ +Y CG L A
Sbjct: 426 SLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDA 485
Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
R+ F + KD V+WNS+I Y G + LF +M + TF L+ + +
Sbjct: 486 RKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSIS 545
Query: 272 GQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVT 330
G D E + M+ GI P + + CM+ + G S A +EM FV P
Sbjct: 546 GMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV---PTARI 602
Query: 331 ITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
S ++A + K + + KM D+ L+NMY++ E R+ +++
Sbjct: 603 WGSLLNASRNHKDITIAEFAAEQIFKMEH-DNTGCYVLLLNMYAEAGRWEDVNRIKLLME 661
Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVD 450
K + S + GK++ +F S V N I + VL G ED V
Sbjct: 662 SKGI----SRTSSRSTVEAKGKSH-VFTNGDRSHVATNKI-YEVLDVVSRMVGEEDIYVH 715
Query: 451 LFQRMGKNDKVKRNTAS 467
R+ VK + S
Sbjct: 716 CVSRLRPETLVKSRSNS 732
Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 134/283 (47%), Gaps = 10/283 (3%)
Query: 436 ISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSC 495
+ G+ + ++A+ LF M K D WN +I G+ G A+ + +M +
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFL-----WNVMIKGFTSCGLYIEAVQFYSRMVFAG 125
Query: 496 FYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSR 555
+ T V+ + A + + + K+IH V++ S + V NSLI Y K G +
Sbjct: 126 VKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAE 185
Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
+F+ M +DI++WNS+I GY+ G ++L LF +M G KP+R + +S + A S
Sbjct: 186 KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVY 245
Query: 616 MVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEAL 675
+GK++ C + ++++D+Y + G++ A M I+ + W +
Sbjct: 246 SPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAWNVM 304
Query: 676 LTACRIHGNIDLAVLAIERLFD---LEPGDVLIQRLILQIYAI 715
+ +G + A L +++ + L+P DV+ +L AI
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQP-DVITSINLLPASAI 346
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 536 PVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF 595
P + + +A S + + +FD M+ D WN +I G+ G + A+ + +M
Sbjct: 65 PALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFA 124
Query: 596 GLKPNRGTFLSIILAHSLAGMVDL--GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKL 653
G+K + T+ +I S+AG+ L GKK+ + + + + +++I LY + G
Sbjct: 125 GVKADTFTYPFVI--KSVAGISSLEEGKKIHAMVIKL-GFVSDVYVCNSLISLYMKLGCA 181
Query: 654 EEAMEFIEDMPIEPDSSIWEALLTA 678
+A + E+MP E D W ++++
Sbjct: 182 WDAEKVFEEMP-ERDIVSWNSMISG 205
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 353 bits (905), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 236/795 (29%), Positives = 379/795 (47%), Gaps = 90/795 (11%)
Query: 151 DGLFP--DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKL 208
D + P D + +L+ C D + K +H ++K G N +L YVK G
Sbjct: 41 DSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD 100
Query: 209 IWARRFFESMDEKDGVAWNSMISGYF---QIGENDEAHR---------------LFDKMC 250
A F+ M E++ V++ ++ GY IG HR LF +
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLD 160
Query: 251 REEI---------KLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
+ EI KLG LI +Y+ G D A + + + + D+ W
Sbjct: 161 KAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGI----LCKDIVVWA 216
Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
++S + +NG +L L M G MPN T +A+ A L A +H +K
Sbjct: 217 GIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT 276
Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
+ D VG L+ +Y++ ++ A +VF+ + DV W+ MIA +CQ G+C +A +LF
Sbjct: 277 CYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLF 336
Query: 418 IKMQESDVPPNVITWNVLISG--------------------------YIQNG-------- 443
I+M+E+ V PN T + +++G Y+ N
Sbjct: 337 IRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC 396
Query: 444 -NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
D AV LF + +N SWN++I GY+ LG+ A +FR+ + VT
Sbjct: 397 EKMDTAVKLFAELS-----SKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVT 451
Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
S L ACA L + + ++HG ++ + + V NSLID YAK G+I +++++F+ M
Sbjct: 452 FSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME 511
Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
+ D+ +WN+LI GY HG AL + D MK KPN TFL ++ S AG++D G++
Sbjct: 512 TIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQE 571
Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
F S+ + I P +EHY+ M+ L GRSG+L++AM+ IE +P EP IW A+L+A
Sbjct: 572 CFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQ 631
Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
N + A + E + + P D L+ +YA + + +RK +E + G W
Sbjct: 632 NNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSW 691
Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSG---------LCIEEEEKE 793
IE + V+ F G L+ L E + +++ +G L +++EEK+
Sbjct: 692 IEHQGDVHYFSVGLSDHPDMKLINGML----EWLNMKATRAGYVPDRNAVLLDMDDEEKD 747
Query: 794 EISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKC 853
+ +HSE+LALA+ L+ + + I I+KN+R+C CH K +S + ++ + D
Sbjct: 748 KRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNR 807
Query: 854 LHHFKNGQCSCGDYW 868
HHF G CSCGD+W
Sbjct: 808 FHHFHAGVCSCGDHW 822
Score = 187 bits (476), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 149/584 (25%), Positives = 263/584 (45%), Gaps = 76/584 (13%)
Query: 58 NTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFED 116
+ Y +L+ CI N A+ +H L + +D+F LL+ Y K G DA +F++
Sbjct: 50 HAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDE 109
Query: 117 MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAG 176
M ERN ++ + Y+ ++ + L+ + ++G + +F L+ + E
Sbjct: 110 MPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEIC 165
Query: 177 KLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQI 236
+HS ++KLG V +++ Y CG + AR FE + KD V W ++S Y +
Sbjct: 166 PWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVEN 225
Query: 237 GENDEAHRL---------------FDKMCREEIKLGVVTFNI------------------ 263
G +++ +L FD + I LG F
Sbjct: 226 GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG 285
Query: 264 --LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
L++ Y QLG A ++ M DV W+ MI+ F QNG ++A+DLF M
Sbjct: 286 VGLLQLYTQLGDMSDAFKVFNEMPK----NDVVPWSFMIARFCQNGFCNEAVDLFIRMRE 341
Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
V+PN T++S ++ C K +G ++H L VK+GF D+ V N+LI++Y+KCE+++
Sbjct: 342 AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWN-------- 433
A ++F + K+ SWN++I GY G GKA+ +F + + V +T++
Sbjct: 402 AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS 461
Query: 434 -------VLISGYIQNGNEDEAV-------DLFQRMGK--------NDKVKRNTASWNSL 471
V + G N + V D++ + G N+ + ASWN+L
Sbjct: 462 LASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNAL 521
Query: 472 IAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR-RS 530
I+GY G AL + M+ PN +T L VL C+ ++ +E ++R
Sbjct: 522 ISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHG 581
Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS-SKDIITWNSLI 573
+E L ++ +SG + + + +G+ ++ W +++
Sbjct: 582 IEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAML 625
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 352 bits (904), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 214/650 (32%), Positives = 335/650 (51%), Gaps = 49/650 (7%)
Query: 260 TFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
T N L RS + C VA+ G + +I + G+ QA+ + +
Sbjct: 16 TVNFLPRSPLKPPSCSVALNNPSISSGAGAK---ISNNQLIQSLCKEGKLKQAIRVLSQE 72
Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
S P+ T I C +L+ + +H + G D + LI MYS +
Sbjct: 73 S----SPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSV 128
Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG- 438
+ A +VFD + + +Y WN++ AG+ + L+ KM V + T+ ++
Sbjct: 129 DYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKAC 188
Query: 439 --------YIQNGNEDEA-----------------VDLFQRMGKNDKVK--------RNT 465
++ G E A VD++ R G D RN
Sbjct: 189 VASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNV 248
Query: 466 ASWNSLIAGYQQLGQKNNALGVFRKM--QSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
SW+++IA Y + G+ AL FR+M ++ PN VT++SVL ACA L A + K IH
Sbjct: 249 VSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIH 308
Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
G +LRR L+S LPV+++L+ Y + G + + +FD M +D+++WNSLI Y +HG+
Sbjct: 309 GYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGK 368
Query: 584 AALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAM 643
A+ +F++M + G P TF+S++ A S G+V+ GK++F ++ + I P IEHY+ M
Sbjct: 369 KAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACM 428
Query: 644 IDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDV 703
+DL GR+ +L+EA + ++DM EP +W +LL +CRIHGN++LA A RLF LEP +
Sbjct: 429 VDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNA 488
Query: 704 LIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSD 763
L+ IYA ++ +V+KL + G+CW+EV+ +Y+FV+ +
Sbjct: 489 GNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLME 548
Query: 764 LLYSWLQNVPENVTAR---SSHSGLC--IEEEEKEEISGIHSEKLALAFALIGSSQAPHT 818
++++L + E++ + G+ +E EEKE I HSEKLALAF LI +S+
Sbjct: 549 QIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKG-EP 607
Query: 819 IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
IRI KN+R+C CH K++S EI + D H FKNG CSCGDYW
Sbjct: 608 IRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 145/276 (52%), Gaps = 8/276 (2%)
Query: 52 GAKVRRNTYINLLQACIDS----NSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGC 106
G + R TY +L+AC+ S N + +++HA L V++ T L+ +YA+ GC
Sbjct: 173 GVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGC 232
Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL--FPDDFLFPKIL 164
+D A VF M RN+ +WSAMI Y+++ + E + F M+++ P+ +L
Sbjct: 233 VDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVL 292
Query: 165 QACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGV 224
QAC + E GKL+H +++ G+ + V ++++ +Y +CGKL +R F+ M ++D V
Sbjct: 293 QACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVV 352
Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
+WNS+IS Y G +A ++F++M VTF ++ + + G + + + M
Sbjct: 353 SWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETM 412
Query: 285 -ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEM 319
GI P + + CM+ + R +A + ++M
Sbjct: 413 WRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDM 448
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 194/419 (46%), Gaps = 53/419 (12%)
Query: 32 LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEID 90
LC G+L +AI VL +Q + + TY L+ C +S+ A ++H L+ ++ D
Sbjct: 56 LCKEGKLKQAIRVL----SQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQD 111
Query: 91 VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
F+ TKL+ +Y+ G +D AR+VF+ R+R +Y W+A+ A + EV+ L++ M +
Sbjct: 112 PFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNR 171
Query: 151 DGLFPDDFLFPKILQAC--GNC--GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
G+ D F + +L+AC C GK +H+ + + G S + +++ +Y + G
Sbjct: 172 IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFG 231
Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE------------- 253
+ +A F M ++ V+W++MI+ Y + G+ EA R F +M RE
Sbjct: 232 CVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSV 291
Query: 254 --------------------IKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
++ G + + L+ Y + G+ +V + RM
Sbjct: 292 LQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDR-- 349
Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME 349
DV +W +IS + +G +A+ +F+EM G P VT S + AC+ + G
Sbjct: 350 --DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407
Query: 350 I-HSLAVKMGFTDDVLVGNSLINMYSKCEEL-EAAERVFDMIKDKDVYSWNSMIAGYCQ 406
+ ++ G + ++++ + L EAA+ V DM + W S++ G C+
Sbjct: 408 LFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLL-GSCR 465
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 171/393 (43%), Gaps = 40/393 (10%)
Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
P + ++ CG+ +H ++ G + ++ +Y G + +AR+
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 215 FESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR-------S 267
F+ ++ WN++ G +E L+ KM R ++ T+ +++ +
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECT 194
Query: 268 YNQLGQC-DVAMEMVKRMES-------------------------LGITP--DVFTWTCM 299
N L + ++ + +R S G P +V +W+ M
Sbjct: 195 VNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAM 254
Query: 300 ISGFAQNGRTSQALDLFKEM--SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
I+ +A+NG+ +AL F+EM PN VT+ S + AC L AL G IH ++
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELF 417
G + V ++L+ MY +C +LE +RVFD + D+DV SWNS+I+ Y GY KA ++F
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374
Query: 418 IKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQ 477
+M + P +T+ ++ G +E LF+ M ++ +K + ++
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMV---DL 431
Query: 478 LGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
LG+ N + +Q P S+L +C
Sbjct: 432 LGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSC 464
>sp|Q9LNP2|PPR47_ARATH Putative pentatricopeptide repeat-containing protein At1g17630
OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1
Length = 731
Score = 348 bits (892), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 219/706 (31%), Positives = 361/706 (51%), Gaps = 79/706 (11%)
Query: 93 VKTKLLSVYAKCGCLDDAREVFEDMRE---RNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
+ L+SVYA+ G L DAR VFE + +L W++++ A + +EL+ M
Sbjct: 91 LAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMR 150
Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
Q GL D ++ P IL+AC G F + H+ VI++G+ V N +L +Y K G++
Sbjct: 151 QRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMG 210
Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
A F M ++ ++WN MI G+ Q + + A ++F+ M REE K
Sbjct: 211 DAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFK-------------- 256
Query: 270 QLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
PD TWT ++S +Q G+ L F M G +G
Sbjct: 257 ---------------------PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGE 295
Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
+ S C +L+AL++ ++H +K GF + + N+LI++Y K +++ AE +F I
Sbjct: 296 ALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQI 355
Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQE----SDVPPNVITWNVLISGYIQNGNE 445
++K + SWNS+I + AG +A LF +++E +V NV+TW +I G G
Sbjct: 356 RNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRG 415
Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
D++++ FR+MQ S N VTI
Sbjct: 416 DDSLE------------------------------------YFRQMQFSKVLANSVTICC 439
Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
+L CA L A N +EIHG V+R S+ ++ V N+L++ YAK G + +F+ + KD
Sbjct: 440 ILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKD 499
Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFC 625
+I+WNS+I GY +HGF AL +FD+M S G P+ ++++ A S AG+V+ G+++F
Sbjct: 500 LISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFY 559
Query: 626 SITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNI 685
S+++ + + P EHY+ ++DL GR G L+EA E +++MP+EP + ALL +CR+H N+
Sbjct: 560 SMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNV 619
Query: 686 DLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV 745
D+A +L LEP L+ IY+ G+ E++ VR L ++ + G WIEV
Sbjct: 620 DIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEV 679
Query: 746 KNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARS-SHSGLCIEEE 790
K Y F +G +S + +Y L+++ ++ + +H G E++
Sbjct: 680 KKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHDGNNYEDD 725
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 345 bits (885), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 401/816 (49%), Gaps = 94/816 (11%)
Query: 139 REVVELFFLMVQDGLFP-DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
R V LM +DG+ P D F +L++C DF GKL+H+ +I+ + + NS
Sbjct: 43 RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 198 VLAVYVKCGKLIWARRFFESM---DEKDGVAWNSMISGYFQIGENDEAHRLF-------- 246
++++Y K G A FE+M ++D V+W++M++ Y G +A ++F
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 247 --DKMC----------REEIKLGVVTFNILIRSYNQLGQ----CDVAMEMVKRMESLGIT 290
+ C + + +G VT L+++ + C + VK S
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 291 PDVF---------TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
VF TWT MI+ Q G +A+ F +M G + T++S SAC +L
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282
Query: 342 KALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCE---ELEAAERVFDMIKDKDVYSWN 398
+ L++G ++HS A++ G DDV SL++MY+KC ++ +VFD ++D V SW
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 399 SMIAGYCQ-AGYCGKAYELFIKM-QESDVPPNVITW------------------------ 432
++I GY + +A LF +M + V PN T+
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 433 -----------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK 481
N +IS ++++ ++A F+ + + +N S+N+ + G +
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSE-----KNLVSYNTFLDGTCRNLNF 455
Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
A + ++ + T S+L A + + K ++IH V++ L + PV N+L
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
I Y+K G+I + +F+ M ++++I+W S+I G+ HGF L+ F+QM G+KPN
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIE 661
T+++I+ A S G+V G + F S+ E ++I P +EHY+ M+DL R+G L +A EFI
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 662 DMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPED 721
MP + D +W L ACR+H N +L LA ++ +L+P + + IYA GK E+
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 722 ALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVT--AR 779
+ ++R+ +E G WIEV + ++ F G + + +Y L + +
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 755
Query: 780 SSHSGLCIEE-------EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCH 832
+ L + + EKE + HSEK+A+AF LI +S++ +R+ KN+R+C CH
Sbjct: 756 VPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKS-RPVRVFKNLRVCGDCH 814
Query: 833 ETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
KY+S + EI L D HHFK+G+CSC DYW
Sbjct: 815 NAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 182 bits (463), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 158/642 (24%), Positives = 288/642 (44%), Gaps = 83/642 (12%)
Query: 36 GRLNEAITVLDSIATQGAKVRRN-TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
G L A++ LD +A G + + T+ +LL++CI + L + +HA + E D +
Sbjct: 40 GDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVL 99
Query: 94 KTKLLSVYAKCGCLDDAREVFEDMR---ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
L+S+Y+K G A +VFE MR +R++ +WSAM+ Y + R + +++F ++
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLG-MSCVRRVRNSVLAVYVKC-GKL 208
GL P+D+ + +++AC N G++ ++K G V S++ ++VK
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219
Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC------------------ 250
A + F+ M E + V W MI+ Q+G EA R F M
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 251 --REEIKLGVVTFNILIRS-------------YNQL---GQCDVAMEMVKRMESLGITPD 292
E + LG + IRS Y + G D ++ RME
Sbjct: 280 AELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMED----HS 335
Query: 293 VFTWTCMISGFAQN-GRTSQALDLFKEMSFVG-VMPNGVTITSAISACTDLKALAMGMEI 350
V +WT +I+G+ +N ++A++LF EM G V PN T +SA AC +L +G ++
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
A K G + V NS+I+M+ K + +E A+R F+ + +K++ S+N+ + G C+
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGY-----IQNGNE-----------------DEA 448
+A++L ++ E ++ + T+ L+SG I+ G + +
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 449 VDLFQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
+ ++ + G D RN SW S+I G+ + G L F +M PN
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 501 VTILSVLPACAYL-VASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
VT +++L AC+++ + S + + ++ + ++D ++G + + +
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 560 GMS-SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPN 600
M D++ W + + +H + L K L PN
Sbjct: 636 TMPFQADVLVWRTFLGACRVHS--NTELGKLAARKILELDPN 675
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 213/467 (45%), Gaps = 41/467 (8%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT--EIDVF 92
NGR +AI V G Y +++AC +S+ + + R FL E DV
Sbjct: 144 NGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVC 203
Query: 93 VKTKLLSVYAKC-GCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQD 151
V L+ ++ K ++A +VF+ M E N+ TW+ MI + RE + F MV
Sbjct: 204 VGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS 263
Query: 152 GLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC---GKL 208
G D F + AC + GK +HS I+ G+ V V S++ +Y KC G +
Sbjct: 264 GFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--VDDVECSLVDMYAKCSADGSV 321
Query: 209 IWARRFFESMDEKDGVAWNSMISGYFQ-IGENDEAHRLFDKMCRE-EIKLGVVTFNILIR 266
R+ F+ M++ ++W ++I+GY + EA LF +M + ++ TF+ +
Sbjct: 322 DDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFK 381
Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRT----------------- 309
+ L V +++ + G+ + +IS F ++ R
Sbjct: 382 ACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS 441
Query: 310 --------------SQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
QA L E++ + + T S +S ++ ++ G +IHS V
Sbjct: 442 YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV 501
Query: 356 KMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
K+G + + V N+LI+MYSKC ++ A RVF+ +++++V SW SMI G+ + G+ + E
Sbjct: 502 KLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLE 561
Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVK 462
F +M E V PN +T+ ++S G E F M ++ K+K
Sbjct: 562 TFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK 608
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 162/345 (46%), Gaps = 22/345 (6%)
Query: 360 TDDVLVGNSLINMYSKCEELEAAERVFDM-----IKDKDVYSWNSMIAGYCQAGYCGKAY 414
++ + V + LI + +L A D+ I+ D +++S++ +A
Sbjct: 23 SNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGK 82
Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
+ ++ E D+ P+ + +N LIS Y ++G+ +A D+F+ M + K R+ SW++++A
Sbjct: 83 LVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGK--RDVVSWSAMMAC 140
Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS-LES 533
Y G++ +A+ VF + PN +V+ AC+ + G +++ ES
Sbjct: 141 YGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFES 200
Query: 534 SLPVMNSLIDTYAKSGN-IVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
+ V SLID + K N + +FD MS +++TW +I + GF A+ F M
Sbjct: 201 DVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGR--- 649
G + ++ T S+ A + + LGK++ ++ +E +++D+Y +
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRS-GLVDDVE--CSLVDMYAKCSA 317
Query: 650 SGKLEEAMEFIEDMPIEPDSSI--WEALLTACRIHGNIDLAVLAI 692
G +++ + + M D S+ W AL+T N +LA AI
Sbjct: 318 DGSVDDCRKVFDRM---EDHSVMSWTALITG--YMKNCNLATEAI 357
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 344 bits (883), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 250/800 (31%), Positives = 401/800 (50%), Gaps = 83/800 (10%)
Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
E ++L M + + D+ +F +++ C E G ++S+ + S + N+ L
Sbjct: 77 EAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFL 136
Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC--------- 250
A++V+ G L+ A F M E++ +WN ++ GY + G DEA L+ +M
Sbjct: 137 AMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDV 196
Query: 251 ------------------REEIKLGVVTF---------NILIRSYNQLGQCDVAMEMVKR 283
+E+ + VV + N LI Y + G A + R
Sbjct: 197 YTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDR 256
Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
M D+ +W MISG+ +NG + L+LF M + V P+ +T+TS ISAC L
Sbjct: 257 MPR----RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
+G +IH+ + GF D+ V NSL MY AE++F ++ KD+ SW +MI+G
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN----- 458
Y KA + + M + V P+ IT ++S G+ D V+L + K
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
Query: 459 -----------------DKV--------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQS 493
DK ++N SW S+IAG + + AL R+M+
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 492
Query: 494 SCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS--LESSLPVMNSLIDTYAKSGNI 551
+ PN +T+ + L ACA + A KEIH VLR L+ LP N+L+D Y + G +
Sbjct: 493 T-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP--NALLDMYVRCGRM 549
Query: 552 VYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAH 611
+ + F+ KD+ +WN L+ GY G ++LFD+M ++P+ TF+S++
Sbjct: 550 NTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608
Query: 612 SLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI 671
S + MV G F S E Y + P ++HY+ ++DL GR+G+L+EA +FI+ MP+ PD ++
Sbjct: 609 SKSQMVRQGLMYF-SKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667
Query: 672 WEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERE 731
W ALL ACRIH IDL L+ + +F+L+ V L+ +YA CGK + KVR++ +E
Sbjct: 668 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 727
Query: 732 NTRRNSFGQCWIEVKNLVYTFVTGG----WSESYSDLLYSWLQNVPE-NVTARSSHSGLC 786
N G W+EVK V+ F++ ++ + +L + + + E +T S S +
Sbjct: 728 NGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMD 787
Query: 787 IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEI 846
E ++EI HSE+ A+AF LI + I + KN+ MC +CH+T K++S EI
Sbjct: 788 ETEISRDEIFCGHSERKAIAFGLINTVPG-MPIWVTKNLSMCENCHDTVKFISKTVRREI 846
Query: 847 FLADSKCLHHFKNGQCSCGD 866
+ D++ HHFK+G+CSCGD
Sbjct: 847 SVRDAEHFHHFKDGECSCGD 866
Score = 236 bits (601), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 160/550 (29%), Positives = 270/550 (49%), Gaps = 71/550 (12%)
Query: 28 HLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLV 86
L LC NG+L EA+ +L+S+ V + ++ L++ C + K+++ L+ +
Sbjct: 65 QLHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSM 124
Query: 87 TEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
+ + V + L+++ + G L DA VF M ERNL++W+ ++G Y++ + E + L+
Sbjct: 125 SSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYH 184
Query: 147 LMV-QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
M+ G+ PD + FP +L+ CG D GK +H V++ G V N+++ +YVKC
Sbjct: 185 RMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC 244
Query: 206 GKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLF------------------- 246
G + AR F+ M +D ++WN+MISGYF+ G E LF
Sbjct: 245 GDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 247 -------DKMCREEIKLGVVTF---------NILIRSYNQLGQCDVAMEMVKRMESLGIT 290
D+ +I V+T N L + Y G A ++ RME
Sbjct: 305 SACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER---- 360
Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
D+ +WT MISG+ N +A+D ++ M V P+ +T+ + +SAC L L G+E+
Sbjct: 361 KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL 420
Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
H LA+K V+V N+LINMYSKC+ ++ A +F I K+V SW S+IAG C
Sbjct: 421 HKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRC 480
Query: 411 GKAYELFIKMQESDVPPNV---------------------ITWNVLISGY-IQNGNEDEA 448
+A +F++ + + PN I +VL +G + + +
Sbjct: 481 FEAL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNAL 539
Query: 449 VDLFQRMGKNDKV-------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
+D++ R G+ + K++ SWN L+ GY + GQ + + +F +M S P+ +
Sbjct: 540 LDMYVRCGRMNTAWSQFNSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEI 599
Query: 502 TILSVLPACA 511
T +S+L C+
Sbjct: 600 TFISLLCGCS 609
Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 233/491 (47%), Gaps = 38/491 (7%)
Query: 52 GAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDA 110
G K T+ +L+ C + +++H + E+D+ V L+++Y KCG + A
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSA 250
Query: 111 REVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
R +F+ M R++ +W+AMI Y + E +ELFF M + PD ++ AC
Sbjct: 251 RLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELL 310
Query: 171 GDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMI 230
GD G+ +H+ VI G + V NS+ +Y+ G A + F M+ KD V+W +MI
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 231 SGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVK-----RME 285
SGY D+A + M ++ +K +T ++ + LG D +E+ K R+
Sbjct: 371 SGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Query: 286 SLGITP--------------------------DVFTWTCMISGFAQNGRTSQALDLFKEM 319
S I +V +WT +I+G N R +AL ++M
Sbjct: 431 SYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM 490
Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
+ PN +T+T+A++AC + AL G EIH+ ++ G D + N+L++MY +C +
Sbjct: 491 KMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRM 549
Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
A F+ K KDV SWN ++ GY + G ELF +M +S V P+ IT+ L+ G
Sbjct: 550 NTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608
Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
++ + + F +M ++ V N + ++ + G+ A +KM + P+
Sbjct: 609 SKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVT---PD 664
Query: 500 CVTILSVLPAC 510
++L AC
Sbjct: 665 PAVWGALLNAC 675
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 186/411 (45%), Gaps = 20/411 (4%)
Query: 39 NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEID-VFVKTKL 97
++AI + K T +L AC + +LH I V V L
Sbjct: 380 DKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNL 439
Query: 98 LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
+++Y+KC C+D A ++F ++ +N+ +W+++I + R E + +F ++ L P+
Sbjct: 440 INMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNA 498
Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES 217
L AC G GK +H+ V++ G+ + N++L +YV+CG++ A F S
Sbjct: 499 ITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS 558
Query: 218 MDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVA 277
+KD +WN +++GY + G+ LFD+M + ++ +TF L+ ++
Sbjct: 559 -QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQG 617
Query: 278 MEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISA 337
+ +ME G+TP++ + C++ + G +A ++M V P+ + ++A
Sbjct: 618 LMYFSKMEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMP---VTPDPAVWGALLNA 674
Query: 338 CTDLKALAMGMEIHSLAVKMGFT-DDVLVGNSLI--NMYSKCEELEAAERVFDMIKDKDV 394
C + +G L+ + F D VG ++ N+Y+ C + +V M+K+ +
Sbjct: 675 CRIHHKIDLG----ELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGL 730
Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNE 445
++ AG GK + + + P N ++ G+ + +E
Sbjct: 731 ----TVDAGCSWVEVKGKVHAF---LSDDKYHPQTKEINTVLEGFYEKMSE 774
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 7/203 (3%)
Query: 479 GQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVM 538
G+ A+ + MQ + ++++ C + A + +++ L + +
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELG 132
Query: 539 NSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSF-GL 597
N+ + + + GN+V + +F MS +++ +WN L+ GY G++ A+ L+ +M G+
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 598 KPNRGTFLSIILAHSLAGMVDL--GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEE 655
KP+ TF ++ + G+ DL GK+V + Y I+ +A+I +Y + G ++
Sbjct: 193 KPDVYTFPCVL--RTCGGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMYVKCGDVKS 249
Query: 656 AMEFIEDMPIEPDSSIWEALLTA 678
A + MP D W A+++
Sbjct: 250 ARLLFDRMP-RRDIISWNAMISG 271
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 342 bits (877), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 209/626 (33%), Positives = 330/626 (52%), Gaps = 55/626 (8%)
Query: 292 DVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIH 351
DVF+W +I+ A++G +++AL F M + + P + AI AC+ L + G + H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 352 SLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCG 411
A G+ D+ V ++LI MYS C +LE A +VFD I +++ SW SMI GY G
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 412 KAYELF--IKMQESD---------------------VPPNVIT----------------- 431
A LF + + E+D VP +T
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 432 -WNVLISGYIQNGNEDEAV--DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVF 488
N L+ Y + G AV +F ++ D+V S+NS+++ Y Q G N A VF
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRV-----SYNSIMSVYAQSGMSNEAFEVF 274
Query: 489 RKM-QSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAK 547
R++ ++ N +T+ +VL A ++ A K IH V+R LE + V S+ID Y K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 548 SGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSI 607
G + +R FD M +K++ +W ++I GY +HG AL+LF M G++PN TF+S+
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394
Query: 608 ILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEP 667
+ A S AG+ G + F ++ + + P +EHY M+DL GR+G L++A + I+ M ++P
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454
Query: 668 DSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRK 727
DS IW +LL ACRIH N++LA +++ RLF+L+ + L+ IYA G+ +D +VR
Sbjct: 455 DSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRM 514
Query: 728 LERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTAR---SSHSG 784
+ + G +E+ V+ F+ G + +Y +L + + S+ S
Sbjct: 515 IMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSS 574
Query: 785 LC--IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMH 842
+C ++EEEKE +HSEKLA+AF ++ + T+ +VKN+R+C CH K +S +
Sbjct: 575 VCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGS-TVNVVKNLRVCSDCHNVIKLISKIV 633
Query: 843 HCEIFLADSKCLHHFKNGQCSCGDYW 868
E + D+K HHFK+G CSCGDYW
Sbjct: 634 DREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/471 (25%), Positives = 209/471 (44%), Gaps = 78/471 (16%)
Query: 82 FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
F V + DVF +++ A+ G +A F MR+ +LY
Sbjct: 32 FNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLY------------------ 73
Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
P FP ++AC + D +GK H G V ++++ +
Sbjct: 74 -------------PTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVM 120
Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGY---------------FQIGENDEAHRLF 246
Y CGKL AR+ F+ + +++ V+W SMI GY + END+ +F
Sbjct: 121 YSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMF 180
Query: 247 -DKM-------------------------CREEIKLGVVTFNILIRSYNQLGQCDVAMEM 280
D M + GV N L+ +Y + G+ VA +
Sbjct: 181 LDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVA--V 238
Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP-NGVTITSAISACT 339
+++ + D ++ ++S +AQ+G +++A ++F+ + V+ N +T+++ + A +
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVS 298
Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
AL +G IH ++MG DDV+VG S+I+MY KC +E A + FD +K+K+V SW +
Sbjct: 299 HSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTA 358
Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
MIAGY G+ KA ELF M +S V PN IT+ +++ G E F M
Sbjct: 359 MIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRF 418
Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
V+ + ++ + G A + ++M+ P+ + S+L AC
Sbjct: 419 GVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMK---MKPDSIIWSSLLAAC 466
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 196/424 (46%), Gaps = 61/424 (14%)
Query: 32 LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLH--AFLNLVTEI 89
L +G EA+ S+ R+++ ++AC I ++ H AF+ +
Sbjct: 51 LARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFV-FGYQS 109
Query: 90 DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
D+FV + L+ +Y+ CG L+DAR+VF+++ +RN+ +W++MI Y + + V LF ++
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169
Query: 150 ------QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYV 203
D +F D ++ AC + +HS VIK G V N++L Y
Sbjct: 170 VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229
Query: 204 KCGK--LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
K G+ + AR+ F+ + +KD V++NS++S Y Q G ++EA +F R +K VVTF
Sbjct: 230 KGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF----RRLVKNKVVTF 285
Query: 262 NILIRS----------------------------------------YNQLGQCDVAMEMV 281
N + S Y + G+ + A +
Sbjct: 286 NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAF 345
Query: 282 KRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL 341
RM++ +V +WT MI+G+ +G ++AL+LF M GV PN +T S ++AC+
Sbjct: 346 DRMKN----KNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHA 401
Query: 342 KALAMGME-IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNS 399
G +++ + G + ++++ + L+ A + +K K D W+S
Sbjct: 402 GLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSS 461
Query: 400 MIAG 403
++A
Sbjct: 462 LLAA 465
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 342 bits (877), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 242/856 (28%), Positives = 421/856 (49%), Gaps = 54/856 (6%)
Query: 57 RNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
R T +L+ C+ S + + H + + + D FV L+++Y K G + + + +FE
Sbjct: 145 RMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFE 204
Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
+M R++ W+ M+ AY E ++L GL P++ + + G+ D +A
Sbjct: 205 EMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGD--DSDA 262
Query: 176 GKLMHSLVIKLGMSCVRRV--RNSVLAVYVKCGKLIWARRFFESMDEKD----GVAWNSM 229
G++ S S V + RN L+ Y+ G+ + F M E D V + M
Sbjct: 263 GQV-KSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILM 321
Query: 230 ISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGI 289
++ ++ ++ + + L + N LI Y +L + A + M
Sbjct: 322 LATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE--- 378
Query: 290 TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDL-KALAMGM 348
D+ +W +I+G AQNG +A+ LF ++ G+ P+ T+TS + A + L + L++
Sbjct: 379 -RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSK 437
Query: 349 EIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAG 408
++H A+K+ D V +LI+ YS+ ++ AE +F+ + D+ +WN+M+AGY Q+
Sbjct: 438 QVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSH 496
Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLIS--GYIQNGNEDEAV----------------- 449
K +LF M + + T + G++ N+ + V
Sbjct: 497 DGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 556
Query: 450 ---DLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
D++ + G + + +W ++I+G + G++ A VF +M+ P
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLP 616
Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
+ TI ++ A + L A + ++IH L+ + + V SL+D YAK G+I + +F
Sbjct: 617 DEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLF 676
Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
+ +I WN+++ G HG L LF QMKS G+KP++ TF+ ++ A S +G+V
Sbjct: 677 KRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVS 736
Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
K S+ Y I P IEHYS + D GR+G +++A IE M +E +S++ LL A
Sbjct: 737 EAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAA 796
Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
CR+ G+ + +L +LEP D L+ +YA K ++ R + + + +
Sbjct: 797 CRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDP 856
Query: 739 GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNV-----PENVTARSSHSGLCIEEEEKE 793
G WIEVKN ++ FV S ++L+Y ++++ E + + + +EEEEKE
Sbjct: 857 GFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKE 916
Query: 794 EISGIHSEKLALAFALIGSSQAPHT-IRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
HSEKLA+AF L+ S P T IR++KN+R+C CH KY++ +++ EI L D+
Sbjct: 917 RALYYHSEKLAVAFGLL--STPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDAN 974
Query: 853 CLHHFKNGQCSCGDYW 868
H FK+G CSCGDYW
Sbjct: 975 RFHRFKDGICSCGDYW 990
Score = 226 bits (575), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 166/671 (24%), Positives = 306/671 (45%), Gaps = 61/671 (9%)
Query: 60 YINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMR 118
+ L+ I S+ + L + HA L + F+ L+S+Y+KCG L AR VF+ M
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 119 ERNLYTWSAMIGAYSRD-----QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDF 173
+R+L +W++++ AY++ + ++ LF ++ QD ++ +L+ C + G
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 174 EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGY 233
A + H K+G+ V +++ +Y+K GK+ + FE M +D V WN M+ Y
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 234 FQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
++G +EA L + +T +L R ++ ++ +
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEII 281
Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
F +S + +G+ S L F +M V + VT ++ + +LA+G ++H +
Sbjct: 282 FR-NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM 340
Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
A+K+G + V NSLINMY K + A VFD + ++D+ SWNS+IAG Q G +A
Sbjct: 341 ALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEA 400
Query: 414 YELFIKMQESDVPPNVITW------------------------------------NVLIS 437
LF+++ + P+ T LI
Sbjct: 401 VCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALID 460
Query: 438 GYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
Y +N EA LF+R + +WN+++AGY Q + L +F M
Sbjct: 461 AYSRNRCMKEAEILFERHN------FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
+ T+ +V C +L A N+ K++H ++ + L V + ++D Y K G++ ++
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 574
Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
FD + D + W ++I G + +G A +F QM+ G+ P+ T ++ A S +
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 634
Query: 618 DLGKKVFCSITE--CYQIIPMIEHYSAMIDLYGRSGKLEEA---MEFIEDMPIEPDSSIW 672
+ G+++ + + C P + ++++D+Y + G +++A + IE M I + W
Sbjct: 635 EQGRQIHANALKLNCTN-DPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMMNI----TAW 687
Query: 673 EALLTACRIHG 683
A+L HG
Sbjct: 688 NAMLVGLAQHG 698
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 123/505 (24%), Positives = 231/505 (45%), Gaps = 42/505 (8%)
Query: 24 FRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF- 82
FR+ L +G+ + + + + + T+I +L + +S+ L +++H
Sbjct: 282 FRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMA 341
Query: 83 LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVV 142
L L ++ + V L+++Y K AR VF++M ER+L +W+++I +++ E V
Sbjct: 342 LKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAV 401
Query: 143 ELFFLMVQDGLFPDDFLFPKILQACGNCGD-FEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
LF +++ GL PD + +L+A + + K +H IK+ V +++
Sbjct: 402 CLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDA 461
Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
Y + + A FE + D VAWN+M++GY Q + + +LF M ++ + T
Sbjct: 462 YSRNRCMKEAEILFERHN-FDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTL 520
Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGI-------------------------------- 289
+ ++ L A+ K++ + I
Sbjct: 521 ATVFKTCGFL----FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFD 576
Query: 290 ---TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
PD WT MISG +NG +A +F +M +GV+P+ TI + A + L AL
Sbjct: 577 SIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQ 636
Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
G +IH+ A+K+ T+D VG SL++MY+KC ++ A +F I+ ++ +WN+M+ G Q
Sbjct: 637 GRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQ 696
Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA 466
G + +LF +M+ + P+ +T+ ++S +G EA + M + +K
Sbjct: 697 HGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIE 756
Query: 467 SWNSLIAGYQQLGQKNNALGVFRKM 491
++ L + G A + M
Sbjct: 757 HYSCLADALGRAGLVKQAENLIESM 781
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 211/474 (44%), Gaps = 47/474 (9%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACID-SNSIHLARKLHAFLNLVTEI-DVF 92
NG EA+ + + G K + T ++L+A + L++++H + + D F
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 93 VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
V T L+ Y++ C+ +A +FE +L W+AM+ Y++ + ++LF LM + G
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
DDF + + CG GK +H+ IK G V + +L +YVKCG + A+
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQ 572
Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKM--------------------CRE 252
F+S+ D VAW +MISG + GE + A +F +M C
Sbjct: 573 FAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 253 EIKLG------VVTFNI---------LIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
++ G + N L+ Y + G D A + KR+E + IT W
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNIT----AWN 688
Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-IHSLAVK 356
M+ G AQ+G + L LFK+M +G+ P+ VT +SAC+ ++ + + S+
Sbjct: 689 AMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGD 748
Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFD-MIKDKDVYSWNSMIAGYCQAGYCGKAYE 415
G ++ + L + + ++ AE + + M + + +++A G
Sbjct: 749 YGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKR 808
Query: 416 LFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTA-SW 468
+ K+ E + P + VL+S ++ + + L + M K KVK++ SW
Sbjct: 809 VATKLLE--LEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSW 860
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 342 bits (876), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 204/600 (34%), Positives = 320/600 (53%), Gaps = 18/600 (3%)
Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAI 335
A+ +R+ PD F + ++ G++++ ++ +F EM G V P+ + I
Sbjct: 54 ALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVI 113
Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVY 395
A + ++L G ++H A+K G + VG +LI MY C +E A +VFD + ++
Sbjct: 114 KAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLV 173
Query: 396 SWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRM 455
+WN++I + A E+F KM + N +WNV+++GYI+ G + A +F M
Sbjct: 174 AWNAVITACFRGNDVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEM 229
Query: 456 GKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVA 515
D V SW+++I G G N + FR++Q + PN V++ VL AC+ +
Sbjct: 230 PHRDDV-----SWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGS 284
Query: 516 SNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD-IITWNSLIC 574
K +HG V + + V N+LID Y++ GN+ +R +F+GM K I++W S+I
Sbjct: 285 FEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIA 344
Query: 575 GYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQII 634
G +HG A+ LF++M ++G+ P+ +F+S++ A S AG+++ G+ F + Y I
Sbjct: 345 GLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIE 404
Query: 635 PMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIER 694
P IEHY M+DLYGRSGKL++A +FI MPI P + +W LL AC HGNI+LA +R
Sbjct: 405 PEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQR 464
Query: 695 LFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVT 754
L +L+P + L+ YA GK +D +RK + + +EV +Y F
Sbjct: 465 LNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTA 524
Query: 755 GGWSESYSDLLYSWLQNV------PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFA 808
G + + L+ + T + + +EEEEKE+ HSEKLALAFA
Sbjct: 525 GEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFA 584
Query: 809 LIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
L S+ + IRIVKN+R+C CH K S ++ EI + D H FK+G CSC DYW
Sbjct: 585 LARLSKGAN-IRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 218/455 (47%), Gaps = 17/455 (3%)
Query: 61 INLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLL--SVYAKCGCLDDAREVFEDMR 118
++LL +C + ++ L F+ + D + KL+ + L AR +
Sbjct: 9 LSLLNSCKNLRALTQIHGL--FIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFP 66
Query: 119 ERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG-LFPDDFLFPKILQACGNCGDFEAGK 177
E + + ++ ++ YS V +F M++ G +FPD F F +++A N G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 178 LMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIG 237
MH +K G+ V +++ +Y CG + +AR+ F+ M + + VAWN++I+ F+
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 238 ENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWT 297
+ A +FDKM + ++N+++ Y + G+ +E KR+ S D +W+
Sbjct: 187 DVAGAREIFDKM----LVRNHTSWNVMLAGYIKAGE----LESAKRIFSEMPHRDDVSWS 238
Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
MI G A NG +++ F+E+ G+ PN V++T +SAC+ + G +H K
Sbjct: 239 TMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA 298
Query: 358 GFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKD-VYSWNSMIAGYCQAGYCGKAYEL 416
G++ V V N+LI+MYS+C + A VF+ +++K + SW SMIAG G +A L
Sbjct: 299 GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRL 358
Query: 417 FIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
F +M V P+ I++ L+ G +E D F M + ++ + ++ Y
Sbjct: 359 FNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYG 418
Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACA 511
+ G+ A +M P + ++L AC+
Sbjct: 419 RSGKLQKAYDFICQMP---IPPTAIVWRTLLGACS 450
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
NG NE+ + G + +L AC S S + LH F+ V V
Sbjct: 247 NGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV 306
Query: 94 KTKLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
L+ +Y++CG + AR VFE M+E R + +W++MI + + E V LF M G
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 366
Query: 153 LFPDDFLFPKILQACGNCGDFEAGK 177
+ PD F +L AC + G E G+
Sbjct: 367 VTPDGISFISLLHACSHAGLIEEGE 391
>sp|Q9C8L6|PPR80_ARATH Pentatricopeptide repeat-containing protein At1g53600,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2
SV=2
Length = 717
Score = 338 bits (866), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 227/720 (31%), Positives = 362/720 (50%), Gaps = 28/720 (3%)
Query: 44 VLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYA 102
V+ I+ +G R N + SN + +K FL T +F +S +A
Sbjct: 2 VMRPISNKGLIYRHNICLRCNSTLAVSNHEPITQKTRNFLETTTTSTAIFQCNSQISKHA 61
Query: 103 KCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPK 162
+ G L +A +F M R++ +W AMI AY+ + + + ++F M + +
Sbjct: 62 RNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITA 121
Query: 163 ILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEK- 221
+++ C +A +L + K +S +++ +V+ G+ A + K
Sbjct: 122 MIK--NKCDLGKAYELFCDIPEKNAVSYA-----TMITGFVRAGRFDEAEFLYAETPVKF 174
Query: 222 -DGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM 280
D VA N ++SGY + G+ +EA R+F M +E VV+ + ++ Y ++G+ A +
Sbjct: 175 RDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKE----VVSCSSMVHGYCKMGRIVDARSL 230
Query: 281 VKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG-VMPNGVTITSAISACT 339
RM +V TWT MI G+ + G LF M G V N T+ AC
Sbjct: 231 FDRMTE----RNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
D G +IH L +M D+ +GNSL++MYSK + A+ VF ++K+KD SWNS
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
+I G Q +AYELF KM D+ ++W +I G+ G + V+LF M + D
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSGKGEISKCVELFGMMPEKD 402
Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
+ +W ++I+ + G AL F KM PN T SVL A A L +
Sbjct: 403 NI-----TWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457
Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
+IHG V++ ++ + L V NSL+ Y K GN + IF +S +I+++N++I GY +
Sbjct: 458 LQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYN 517
Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
GF AL LF ++S G +PN TFL+++ A G VDLG K F S+ Y I P +H
Sbjct: 518 GFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDH 577
Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
Y+ M+DL GRSG L++A I MP +P S +W +LL+A + H +DLA LA ++L +LE
Sbjct: 578 YACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELE 637
Query: 700 PGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSE 759
P ++ Q+Y+I GK D ++ +++ + G WI +K V+ F+ G S+
Sbjct: 638 PDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQ 697
>sp|Q9MAT2|PPR10_ARATH Pentatricopeptide repeat-containing protein At1g04840
OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1
Length = 665
Score = 337 bits (864), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 201/585 (34%), Positives = 306/585 (52%), Gaps = 21/585 (3%)
Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
F +I G +N R ++ F M +GV P+ +T + + + L +G +H+
Sbjct: 92 FVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAA 151
Query: 354 AVKMGFTD-DVLVGNSLINMYSKCEELEAAERVF----DMIKDKDVYSWNSMIAGYCQAG 408
+K F D D V SL++MY+K +L+ A +VF D IK + + WN +I GYC+A
Sbjct: 152 TLK-NFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAK 210
Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
A LF M E N +W+ LI GY+ +G + A LF+ M + +N SW
Sbjct: 211 DMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNRAKQLFELMPE-----KNVVSW 261
Query: 469 NSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLR 528
+LI G+ Q G A+ + +M PN TI +VL AC+ A IHG +L
Sbjct: 262 TTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILD 321
Query: 529 RSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDL 588
++ + +L+D YAK G + + T+F M+ KDI++W ++I G+ +HG +H A+
Sbjct: 322 NGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQC 381
Query: 589 FDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYG 648
F QM G KP+ FL+++ A + VDLG F S+ Y I P ++HY ++DL G
Sbjct: 382 FRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLG 441
Query: 649 RSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRL 708
R+GKL EA E +E+MPI PD + W AL AC+ H A + L +L+P
Sbjct: 442 RAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIF 501
Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSW 768
+ + +A G +D K R ++ + S G +IE+ + F G +S + +
Sbjct: 502 LDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGLK 561
Query: 769 LQNVPENVTARSSHSGL-----CIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVK 823
L + + + G IEEEEKE ++GIHSEKLAL + ++ TIRI+K
Sbjct: 562 LDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGIHSEKLALTLGFLRTAPGT-TIRIIK 620
Query: 824 NIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
N+R+C CH KYVS + +I L D++ HHFK+G+CSCGDYW
Sbjct: 621 NLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKDGRCSCGDYW 665
Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 134/508 (26%), Positives = 244/508 (48%), Gaps = 21/508 (4%)
Query: 49 ATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLD 108
A + A + +I+L+ AC D+ S+ R +HA + + V +L+S + D
Sbjct: 21 ADRQASPDESHFISLIHACKDTASL---RHVHAQILRRGVLSSRVAAQLVSCSSLLKSPD 77
Query: 109 DAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACG 168
+ +F + ERN + +A+I + + R+ V F LM++ G+ PD FP +L++
Sbjct: 78 YSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNS 137
Query: 169 NCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFES----MDEKDGV 224
G G+ +H+ +K + C VR S++ +Y K G+L A + FE + ++ +
Sbjct: 138 KLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197
Query: 225 AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM 284
WN +I+GY + + A LF M E G +++ LI+ Y G+ + A ++ + M
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRSM--PERNSG--SWSTLIKGYVDSGELNRAKQLFELM 253
Query: 285 ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKAL 344
+V +WT +I+GF+Q G A+ + EM G+ PN TI + +SAC+ AL
Sbjct: 254 PE----KNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGAL 309
Query: 345 AMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGY 404
G+ IH + G D +G +L++MY+KC EL+ A VF + KD+ SW +MI G+
Sbjct: 310 GSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGW 369
Query: 405 CQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
G +A + F +M S P+ + + +++ + + D ++ F M + ++
Sbjct: 370 AVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPT 429
Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
+ ++ + G+ N A + M P+ T ++ AC + + +
Sbjct: 430 LKHYVLVVDLLGRAGKLNEAHELVENMP---INPDLTTWAALYRACKAHKGYRRAESVSQ 486
Query: 525 CVLRRSLESSLPVMNSLID-TYAKSGNI 551
+L L+ L +D T+A GNI
Sbjct: 487 NLL--ELDPELCGSYIFLDKTHASKGNI 512
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 6/228 (2%)
Query: 6 LTTFQQLHSLLTKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQ 65
L +QL L+ +K N T ++ G AI+ + +G K T +L
Sbjct: 243 LNRAKQLFELMPEK-NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLS 301
Query: 66 ACIDSNSIHLARKLHAF-LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYT 124
AC S ++ ++H + L+ ++D + T L+ +YAKCG LD A VF +M +++ +
Sbjct: 302 ACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILS 361
Query: 125 WSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVI 184
W+AMI ++ R+ + ++ F M+ G PD+ +F +L AC N + + G L +
Sbjct: 362 WTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLG-LNFFDSM 420
Query: 185 KLGMSCVRRVRNSVLAVYV--KCGKLIWARRFFESMD-EKDGVAWNSM 229
+L + +++ VL V + + GKL A E+M D W ++
Sbjct: 421 RLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 94/191 (49%), Gaps = 17/191 (8%)
Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
P+ +S++ AC + ++ +H +LRR + SS V L+ + + YS +I
Sbjct: 27 PDESHFISLIHACK---DTASLRHVHAQILRRGVLSS-RVAAQLVSCSSLLKSPDYSLSI 82
Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
F ++ N+LI G + + +++ F M G+KP+R TF ++ ++S G
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142
Query: 618 DLGKKVFCS----ITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP--IEPDSS- 670
LG+ + + +C + + +++D+Y ++G+L+ A + E+ P I+ +S
Sbjct: 143 WLGRALHAATLKNFVDCDSFVRL-----SLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197
Query: 671 IWEALLTA-CR 680
IW L+ CR
Sbjct: 198 IWNVLINGYCR 208
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 5/149 (3%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVK 94
+GR ++AI + G K ++ +L AC++S+ + L + L I+ +K
Sbjct: 372 HGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLK 431
Query: 95 TKLLSV--YAKCGCLDDAREVFEDMR-ERNLYTWSAMIGAYSRDQRWR--EVVELFFLMV 149
+L V + G L++A E+ E+M +L TW+A+ A + +R E V L +
Sbjct: 432 HYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLEL 491
Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKL 178
L K + GN D E +L
Sbjct: 492 DPELCGSYIFLDKTHASKGNIQDVEKRRL 520
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 337 bits (864), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 208/674 (30%), Positives = 345/674 (51%), Gaps = 46/674 (6%)
Query: 237 GENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTW 296
G +D+ ++ + + L ++T N LI Y + + +A ++ M +V +W
Sbjct: 20 GLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE----RNVVSW 75
Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
+ ++SG NG +L LF EM G+ PN T ++ + AC L AL G++IH +K
Sbjct: 76 SALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLK 135
Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
+GF V VGNSL++MYSKC + AE+VF I D+ + SWN+MIAG+ AGY KA +
Sbjct: 136 IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDT 195
Query: 417 FIKMQESDVP--PNVITWNVLI-----SGYIQNGNEDEA-------------------VD 450
F MQE+++ P+ T L+ +G I G + VD
Sbjct: 196 FGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVD 255
Query: 451 LFQRMG-------KNDKVKRNTA-SWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVT 502
L+ + G D++K T SW+SLI GY Q G+ A+G+F+++Q +
Sbjct: 256 LYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFA 315
Query: 503 ILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMS 562
+ S++ A + K++ ++ V+NS++D Y K G + + F M
Sbjct: 316 LSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQ 375
Query: 563 SKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK 622
KD+I+W +I GY HG ++ +F +M ++P+ +L+++ A S +GM+ G++
Sbjct: 376 LKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEE 435
Query: 623 VFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIH 682
+F + E + I P +EHY+ ++DL GR+G+L+EA I+ MPI+P+ IW+ LL+ CR+H
Sbjct: 436 LFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVH 495
Query: 683 GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCW 742
G+I+L + L ++ + ++ +Y G + R+L + G W
Sbjct: 496 GDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSW 555
Query: 743 IEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSS------HSGLCIEEEEKEEIS 796
+E++ V+ F +G S + ++ L+ + H I++E KEE
Sbjct: 556 VEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENL 615
Query: 797 GIHSEKLALAFALI--GSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCL 854
HSEKLA+ AL G +Q TIR+ KN+R+CV CHE K +S + + D+
Sbjct: 616 RAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRF 675
Query: 855 HHFKNGQCSCGDYW 868
H F++G CSCGDYW
Sbjct: 676 HSFEDGCCSCGDYW 689
Score = 167 bits (424), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 209/443 (47%), Gaps = 36/443 (8%)
Query: 56 RRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVF 114
+R +++L+ C ++H +L + +++ L+ +Y KC A +VF
Sbjct: 5 QRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVF 64
Query: 115 EDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFE 174
+ M ERN+ +WSA++ + + + + LF M + G++P++F F L+ACG E
Sbjct: 65 DSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALE 124
Query: 175 AGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYF 234
G +H +K+G + V NS++ +Y KCG++ A + F + ++ ++WN+MI+G+
Sbjct: 125 KGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFV 184
Query: 235 QIGENDEAHRLFDKMCREEIKLGVVTFNI--LIRSYNQLG-----------------QCD 275
G +A F M IK F + L+++ + G C
Sbjct: 185 HAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 244
Query: 276 VAMEMVKRMESLGIT----------------PDVFTWTCMISGFAQNGRTSQALDLFKEM 319
+ + + L + + +W+ +I G+AQ G +A+ LFK +
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
+ + ++S I D L G ++ +LAVK+ + V NS+++MY KC +
Sbjct: 305 QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLV 364
Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
+ AE+ F ++ KDV SW +I GY + G K+ +F +M ++ P+ + + ++S
Sbjct: 365 DEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSAC 424
Query: 440 IQNGNEDEAVDLFQRMGKNDKVK 462
+G E +LF ++ + +K
Sbjct: 425 SHSGMIKEGEELFSKLLETHGIK 447
Score = 143 bits (360), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 197/412 (47%), Gaps = 50/412 (12%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
NG L ++++ + QG T+ L+AC N++ ++H F L + E+ V V
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 94 KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
L+ +Y+KCG +++A +VF + +R+L +W+AMI + + ++ F +M + +
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Query: 154 --FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRR--VRNSVLAVYVKCGKLI 209
PD+F +L+AC + G AGK +H +++ G C + S++ +YVKCG L
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 264
Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF-------- 261
AR+ F+ + EK ++W+S+I GY Q GE EA LF ++ +E+ + +F
Sbjct: 265 SARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL--QELNSQIDSFALSSIIGV 322
Query: 262 -----------------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPD 292
N ++ Y + G D A + M+ D
Sbjct: 323 FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQ----LKD 378
Query: 293 VFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHS 352
V +WT +I+G+ ++G +++ +F EM + P+ V + +SAC+ + G E+ S
Sbjct: 379 VISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFS 438
Query: 353 -LAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK-DVYSWNSMIA 402
L G V ++++ + L+ A+ + D + K +V W ++++
Sbjct: 439 KLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 189/435 (43%), Gaps = 78/435 (17%)
Query: 324 VMPNG-VTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAA 382
++PN + S + CT G ++H +K G +++ N LI+MY KC E A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 383 ERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW---------- 432
+VFD + +++V SW+++++G+ G + LF +M + PN T+
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 433 -------------------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTAS 467
N L+ Y + G +EA +F+R+ V R+ S
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-----VDRSLIS 175
Query: 468 WNSLIAGYQQLGQKNNALGVFRKMQSSCF--YPNCVTILSVLPACAYLVASNKVKEIHGC 525
WN++IAG+ G + AL F MQ + P+ T+ S+L AC+ K+IHG
Sbjct: 176 WNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 235
Query: 526 VLRRSLE--SSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWH 583
++R SS + SL+D Y K G + +R FD + K +I+W+SLI GY G +
Sbjct: 236 LVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFV 295
Query: 584 AALDLF-------DQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKK--------VFCSIT 628
A+ LF Q+ SF L G F L M L K V S+
Sbjct: 296 EAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVV 355
Query: 629 ECYQIIPMIEH---------------YSAMIDLYGRSGKLEEAMEFIEDM---PIEPDSS 670
+ Y +++ ++ +I YG+ G ++++ +M IEPD
Sbjct: 356 DMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEV 415
Query: 671 IWEALLTACRIHGNI 685
+ A+L+AC G I
Sbjct: 416 CYLAVLSACSHSGMI 430
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 147/303 (48%), Gaps = 7/303 (2%)
Query: 59 TYINLLQACIDSNSIHLARKLHAFL---NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
T +LL+AC + I+ +++H FL + L+ +Y KCG L AR+ F+
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 271
Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
++E+ + +WS++I Y+++ + E + LF + + D F I+ +
Sbjct: 272 QIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQ 331
Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
GK M +L +KL V NSV+ +Y+KCG + A + F M KD ++W +I+GY +
Sbjct: 332 GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391
Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMV-KRMESLGITPDVF 294
G ++ R+F +M R I+ V + ++ + + G E+ K +E+ GI P V
Sbjct: 392 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 451
Query: 295 TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLA 354
+ C++ + GR +A L M + PN + +S C + +G E+ +
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMP---IKPNVGIWQTLLSLCRVHGDIELGKEVGKIL 508
Query: 355 VKM 357
+++
Sbjct: 509 LRI 511
>sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protein At2g40720
OS=Arabidopsis thaliana GN=PCMP-E26 PE=3 SV=1
Length = 860
Score = 337 bits (863), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 239/799 (29%), Positives = 387/799 (48%), Gaps = 88/799 (11%)
Query: 59 TYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFVKTKLLSVYAKCGCLDDAREVFED- 116
T+ +LL+AC ++ + +H + ++ D F+ T L+++Y KCG LD A +VF+
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 117 ------MRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNC 170
+ R++ W++MI Y + +R++E V F M+ G+ PD F ++
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 171 GDF--EAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVA-WN 227
G+F E GK +H +++ + ++ +++ +Y K G I A R F +++K V WN
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241
Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ-----LGQ---CDVA-- 277
MI G+ G + + L+ +KL +F + + +Q G+ CDV
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301
Query: 278 ------------MEMVKRMESLGITPDVFT---------WTCMISGFAQNGRTSQALDLF 316
+ M + +G VF+ W M++ +A+N ALDLF
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLF 361
Query: 317 KEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKC 376
M V+P+ T+++ IS C+ L G +H+ K + ++L+ +YSKC
Sbjct: 362 GFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKC 421
Query: 377 EELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD--VPP------- 427
A VF +++KD+ +W S+I+G C+ G +A ++F M++ D + P
Sbjct: 422 GCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTS 481
Query: 428 ----------------------------NVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
NV + LI Y + G + A+ +F M
Sbjct: 482 VTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMST-- 539
Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKV 519
N +WNS+I+ Y + ++ +F M S +P+ V+I SVL A + + K
Sbjct: 540 ---ENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKG 596
Query: 520 KEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLH 579
K +HG LR + S + N+LID Y K G Y+ IF M K +ITWN +I GY H
Sbjct: 597 KSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSH 656
Query: 580 GFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEH 639
G AL LFD+MK G P+ TFLS+I A + +G V+ GK +F + + Y I P +EH
Sbjct: 657 GDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEH 716
Query: 640 YSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE 699
Y+ M+DL GR+G LEEA FI+ MPIE DSSIW LL+A R H N++L +L+ E+L +E
Sbjct: 717 YANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRME 776
Query: 700 P--GDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGW 757
P G +Q ++ +Y G +A K+ L +E G WIEV + F +GG
Sbjct: 777 PERGSTYVQ--LINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGS 834
Query: 758 SESYSDLLYSWLQNVPENV 776
S +++ L + N+
Sbjct: 835 SSPMKAEIFNVLNRLKSNM 853
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 136/512 (26%), Positives = 244/512 (47%), Gaps = 44/512 (8%)
Query: 19 KSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARK 78
KSN + + G+G ++ + K+ ++ L AC S + R+
Sbjct: 234 KSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQ 293
Query: 79 LHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQR 137
+H + + D +V T LLS+Y+KCG + +A VF + ++ L W+AM+ AY+ +
Sbjct: 294 IHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDY 353
Query: 138 WREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNS 197
++LF M Q + PD F ++ C G + GK +H+ + K + + ++
Sbjct: 354 GYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESA 413
Query: 198 VLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE---- 253
+L +Y KCG A F+SM+EKD VAW S+ISG + G+ EA ++F M ++
Sbjct: 414 LLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLK 473
Query: 254 -----------------------------IKLGVVTFNILIRS-----YNQLGQCDVAME 279
IK G+V N+ + S Y++ G ++A++
Sbjct: 474 PDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLV-LNVFVGSSLIDLYSKCGLPEMALK 532
Query: 280 MVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACT 339
+ M T ++ W MIS +++N ++DLF M G+ P+ V+ITS + A +
Sbjct: 533 VFTSMS----TENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAIS 588
Query: 340 DLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNS 399
+L G +H +++G D + N+LI+MY KC + AE +F ++ K + +WN
Sbjct: 589 STASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNL 648
Query: 400 MIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKND 459
MI GY G C A LF +M+++ P+ +T+ LIS +G +E ++F+ M ++
Sbjct: 649 MIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDY 708
Query: 460 KVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
++ N + +++ + G A + M
Sbjct: 709 GIEPNMEHYANMVDLLGRAGLLEEAYSFIKAM 740
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 173/639 (27%), Positives = 273/639 (42%), Gaps = 101/639 (15%)
Query: 158 FLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE- 216
F FP +L+AC + GK +H V+ LG + S++ +YVKCG L +A + F+
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 217 ------SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMC-------------------- 250
+ +D WNSMI GYF+ E F +M
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 251 -----REEIK----------LGVVTF--NILIRSYNQLGQCDVAMEMVKRMESLGITPDV 293
REE K L +F LI Y + G A + +E +V
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIED---KSNV 237
Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
W MI GF +G +LDL+ V + T A+ AC+ + G +IH
Sbjct: 238 VLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCD 297
Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
VKMG +D V SL++MYSKC + AE VF + DK + WN+M+A Y + Y A
Sbjct: 298 VVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSA 357
Query: 414 YELFIKMQESDVPPNVITW-----------------------------------NVLISG 438
+LF M++ V P+ T + L++
Sbjct: 358 LDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTL 417
Query: 439 YIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ--SSCF 496
Y + G + +A +F+ M + D V +W SLI+G + G+ AL VF M+
Sbjct: 418 YSKCGCDPDAYLVFKSMEEKDMV-----AWGSLISGLCKNGKFKEALKVFGDMKDDDDSL 472
Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
P+ + SV ACA L A ++HG +++ L ++ V +SLID Y+K G +
Sbjct: 473 KPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALK 532
Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
+F MS+++++ WNS+I Y + ++DLF+ M S G+ P+ + S+++A S
Sbjct: 533 VFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTAS 592
Query: 617 VDLGKKVFCSITECYQI---IPMIEHY-SAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIW 672
+ GK + Y + IP H +A+ID+Y + G + A + M W
Sbjct: 593 LLKGKSL-----HGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ-HKSLITW 646
Query: 673 EALLTACRIHGNIDLAVLAIERLFDL--EPGDVLIQRLI 709
++ HG+ A+ + + P DV LI
Sbjct: 647 NLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLI 685
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 128/551 (23%), Positives = 230/551 (41%), Gaps = 110/551 (19%)
Query: 300 ISGFAQNGRTSQALDLFKEMSFVGVMP---NGVTITSAISACTDLKALAMGMEIHSLAVK 356
I Q G QAL L+ + G P + T S + AC+ L L+ G IH V
Sbjct: 31 IRALIQKGEYLQALHLYSKHD--GSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVV 88
Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDM-------IKDKDVYSWNSMIAGYCQAGY 409
+G+ D + SL+NMY KC L+ A +VFD + +DV WNSMI GY +
Sbjct: 89 LGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRR 148
Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGN------------------------E 445
+ F +M V P+ + ++++S + GN +
Sbjct: 149 FKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLK 208
Query: 446 DEAVDLFQRMGKNDKV---------KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCF 496
+D++ + G + K N WN +I G+ G ++L ++ +++
Sbjct: 209 TALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSV 268
Query: 497 YPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRT 556
+ L AC+ S ++IH V++ L + V SL+ Y+K G + + T
Sbjct: 269 KLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAET 328
Query: 557 IFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGM 616
+F + K + WN+++ Y + + ++ALDLF M+ + P+ T ++I S+ G+
Sbjct: 329 VFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGL 388
Query: 617 VDLGKKVFCSI-------------------------TECYQIIPMIEH-----YSAMIDL 646
+ GK V + + Y + +E + ++I
Sbjct: 389 YNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISG 448
Query: 647 YGRSGKLEEAMEFIEDM-----PIEPDSSIWEALLTAC----------RIHGNIDLAVLA 691
++GK +EA++ DM ++PDS I ++ AC ++HG++ L
Sbjct: 449 LCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLV 508
Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKV-RKLERENT----------RRNSFGQ 740
+ +V + ++ +Y+ CG PE ALKV + EN RN+ +
Sbjct: 509 L---------NVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPE 559
Query: 741 CWIEVKNLVYT 751
I++ NL+ +
Sbjct: 560 LSIDLFNLMLS 570
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 336 bits (862), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 216/736 (29%), Positives = 357/736 (48%), Gaps = 81/736 (11%)
Query: 97 LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
+++ Y + G L DAR +F +M ++ W+ MI + + +E FF M + +
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
+L A G + + G ++H+ IKLG++ V +S++++Y KC K+ A + FE
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF--------------- 261
+++EK+ V WN+MI GY GE+ + LF M + TF
Sbjct: 387 ALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEM 446
Query: 262 --------------------NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMIS 301
N L+ Y + G + A ++ +RM D TW +I
Sbjct: 447 GSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM----CDRDNVTWNTIIG 502
Query: 302 GFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTD 361
+ Q+ S+A DLFK M+ G++ +G + S + ACT + L G ++H L+VK G
Sbjct: 503 SYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDR 562
Query: 362 DVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQ 421
D+ G+SLI+MYSKC ++ A +VF + + V S N++IAGY Q +A LF +M
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEML 621
Query: 422 ESDVPPNVITWNVLISG------------------------------------YIQNGNE 445
V P+ IT+ ++ Y+ +
Sbjct: 622 TRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGM 681
Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
EA LF + ++ W +++G+ Q G AL +++M+ P+ T ++
Sbjct: 682 TEACALFSELSS----PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVT 737
Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK- 564
VL C+ L + + + IH + + + N+LID YAK G++ S +FD M +
Sbjct: 738 VLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS 797
Query: 565 DIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVF 624
++++WNSLI GY +G+ AL +FD M+ + P+ TFL ++ A S AG V G+K+F
Sbjct: 798 NVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIF 857
Query: 625 CSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGN 684
+ Y I ++H + M+DL GR G L+EA +FIE ++PD+ +W +LL ACRIHG+
Sbjct: 858 EMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGD 917
Query: 685 IDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIE 744
++ E+L +LEP + L+ IYA G E A +RK+ R+ + G WI+
Sbjct: 918 DIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWID 977
Query: 745 VKNLVYTFVTGGWSES 760
V+ + F G S S
Sbjct: 978 VEQRTHIFAAGDKSHS 993
Score = 267 bits (682), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 195/754 (25%), Positives = 354/754 (46%), Gaps = 91/754 (12%)
Query: 97 LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
++ +YAKC + A + F D E+++ W++M+ YS + +V+ F + ++ +FP+
Sbjct: 101 IVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPN 159
Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
F F +L C + E G+ +H +IK+G+ +++ +Y KC ++ ARR FE
Sbjct: 160 KFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFE 219
Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
+ + + V W + SGY + G +EA +F++M E + + F +I +Y +LG+
Sbjct: 220 WIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKD 279
Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
A + M S PDV W MISG + G + A++ F M V T+ S +S
Sbjct: 280 ARLLFGEMSS----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
A + L +G+ +H+ A+K+G ++ VG+SL++MYSKCE++EAA +VF+ +++K+
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF 395
Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQES--------------------------------- 423
WN+MI GY G K ELF+ M+ S
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 424 --DVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQK 481
+ N+ N L+ Y + G ++A +F+RM D V +WN++I Y Q +
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNV-----TWNTIIGSYVQDENE 510
Query: 482 NNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSL 541
+ A +F++M + + S L AC ++ + K++H ++ L+ L +SL
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSL 570
Query: 542 IDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR 601
ID Y+K G I +R +F + +++ N+LI GY + A + LF +M + G+ P+
Sbjct: 571 IDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVV-LFQEMLTRGVNPSE 629
Query: 602 GTFLSIILAHSLAGMVDLGKKVFCSITEC-------YQIIPMIEHY-------------- 640
TF +I+ A + LG + IT+ Y I ++ Y
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFS 689
Query: 641 -----------SAMIDLYGRSGKLEEAMEFIEDM---PIEPDSSIWEALLTACRIHGNID 686
+ M+ + ++G EEA++F ++M + PD + + +L C + ++
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLR 749
Query: 687 LAVLAIERLFDLEPG-DVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEV 745
+F L D L ++ +YA CG + + +V + RR S W
Sbjct: 750 EGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQV----FDEMRRRSNVVSW--- 802
Query: 746 KNLVYTFVTGGWSESYSDLLYSWLQN--VPENVT 777
+L+ + G++E + S Q+ +P+ +T
Sbjct: 803 NSLINGYAKNGYAEDALKIFDSMRQSHIMPDEIT 836
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 163/617 (26%), Positives = 282/617 (45%), Gaps = 88/617 (14%)
Query: 41 AITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLS 99
AI ++ K R+T ++L A ++ L +HA + L +++V + L+S
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 100 VYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFL 159
+Y+KC ++ A +VFE + E+N W+AMI Y+ + +V+ELF M G DDF
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 160 FPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMD 219
F +L C D E G HS++IK ++ V N+++ +Y KCG L AR+ FE M
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMC 490
Query: 220 EKDGVAWNSMISGYFQIGENDEAHRLFDKM------------------CRE--------- 252
++D V WN++I Y Q EA LF +M C
Sbjct: 491 DRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQ 550
Query: 253 ----EIKLG----VVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPD--VFTWTCMISG 302
+K G + T + LI Y+ +C + + K SL P+ V + +I+G
Sbjct: 551 VHCLSVKCGLDRDLHTGSSLIDMYS---KCGIIKDARKVFSSL---PEWSVVSMNALIAG 604
Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
++QN +A+ LF+EM GV P+ +T + + AC ++L +G + H K GF+ +
Sbjct: 605 YSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSE 663
Query: 363 -VLVGNSLINMYSKCEELEAAERVF-DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
+G SL+ MY + A +F ++ K + W M++G+ Q G+ +A + + +M
Sbjct: 664 GEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEM 723
Query: 421 QESDVPPNVITW-----------------------------------NVLISGYIQNGNE 445
+ V P+ T+ N LI Y + G+
Sbjct: 724 RHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDM 783
Query: 446 DEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILS 505
+ +F M + + N SWNSLI GY + G +AL +F M+ S P+ +T L
Sbjct: 784 KGSSQVFDEMRR----RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLG 839
Query: 506 VLPACAYLVASNKVKEIHGCVL-RRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSK 564
VL AC++ + ++I ++ + +E+ + + ++D + G + + + + K
Sbjct: 840 VLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLK 899
Query: 565 -DIITWNSLICGYVLHG 580
D W+SL+ +HG
Sbjct: 900 PDARLWSSLLGACRIHG 916
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 161/660 (24%), Positives = 290/660 (43%), Gaps = 62/660 (9%)
Query: 126 SAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQAC-GNCGDFEA--------- 175
SAM ++S +R +L + L D + ++L+ C G C F++
Sbjct: 11 SAMFDSFSFVRRLSYSPDLGRRIYGHVLPSHDQIHQRLLEICLGQCKLFKSRKVFDEMPQ 70
Query: 176 --------GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWN 227
GK +HS + LG+ R+ N+++ +Y KC ++ +A + F+ + EKD AWN
Sbjct: 71 RLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWN 129
Query: 228 SMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESL 287
SM+S Y IG+ + R F + +I TF+I++ + + + ++ M +
Sbjct: 130 SMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKM 189
Query: 288 GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMG 347
G+ + + ++ +A+ R S A +F+ + V PN V T S
Sbjct: 190 GLERNSYCGGALVDMYAKCDRISDARRVFEWI----VDPNTVCWTCLFSGYVKAGLPEEA 245
Query: 348 MEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQA 407
+ + G D L ++IN Y + +L+ A +F + DV +WN MI+G+ +
Sbjct: 246 VLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKR 305
Query: 408 GYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED-------EAVDLF-------- 452
G A E F M++S V T ++S N D EA+ L
Sbjct: 306 GCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVG 365
Query: 453 ----------QRMGKNDKV-----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFY 497
++M KV ++N WN++I GY G+ + + +F M+SS +
Sbjct: 366 SSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYN 425
Query: 498 PNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTI 557
+ T S+L CA + H ++++ L +L V N+L+D YAK G + +R I
Sbjct: 426 IDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI 485
Query: 558 FDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMV 617
F+ M +D +TWN++I YV A DLF +M G+ + S + A + +
Sbjct: 486 FERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGL 545
Query: 618 DLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLT 677
GK+V C +C + + S++ID+Y + G +++A + +P S + L
Sbjct: 546 YQGKQVHCLSVKC-GLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP--EWSVVSMNALI 602
Query: 678 ACRIHGNIDLAVLAIERLFD--LEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRR 735
A N++ AV+ + + + P ++ ++ C KPE + + T+R
Sbjct: 603 AGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIV----EACHKPESLTLGTQFHGQITKR 658
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 143/306 (46%), Gaps = 8/306 (2%)
Query: 38 LNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL--VTEIDVFVKT 95
L EA+ + + T+G T+ +++AC S+ L + H + + ++
Sbjct: 610 LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGI 669
Query: 96 KLLSVYAKCGCLDDAREVFEDMRE-RNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLF 154
LL +Y + +A +F ++ +++ W+ M+ +S++ + E ++ + M DG+
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVL 729
Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRF 214
PD F +L+ C G+ +HSL+ L N+++ +Y KCG + + +
Sbjct: 730 PDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQV 789
Query: 215 FESMDEKDGV-AWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
F+ M + V +WNS+I+GY + G ++A ++FD M + I +TF ++ + + G+
Sbjct: 790 FDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGK 849
Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
++ + M GI V CM+ + G +A D + + + P+ +
Sbjct: 850 VSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQN---LKPDARLWS 906
Query: 333 SAISAC 338
S + AC
Sbjct: 907 SLLGAC 912
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 103/200 (51%), Gaps = 4/200 (2%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
NG EA+ + G + T++ +L+ C +S+ R +H+ + +L ++D
Sbjct: 710 NGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELT 769
Query: 94 KTKLLSVYAKCGCLDDAREVFEDMRER-NLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
L+ +YAKCG + + +VF++MR R N+ +W+++I Y+++ + +++F M Q
Sbjct: 770 SNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSH 829
Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVI-KLGMSCVRRVRNSVLAVYVKCGKLIWA 211
+ PD+ F +L AC + G G+ + ++I + G+ ++ + + G L A
Sbjct: 830 IMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEA 889
Query: 212 RRFFESMDEK-DGVAWNSMI 230
F E+ + K D W+S++
Sbjct: 890 DDFIEAQNLKPDARLWSSLL 909
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 336 bits (861), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 227/646 (35%), Positives = 324/646 (50%), Gaps = 46/646 (7%)
Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGITP--DVFTWTCMISGFAQNGRTSQALDLFKEM 319
N LI Y++L + A +++ +TP +V +WT +ISG AQNG S AL F EM
Sbjct: 46 NYLINMYSKLDHPESARLVLR------LTPARNVVSWTSLISGLAQNGHFSTALVEFFEM 99
Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
GV+PN T A A L+ G +IH+LAVK G DV VG S +MY K
Sbjct: 100 RREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR 159
Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-- 437
+ A ++FD I ++++ +WN+ I+ G +A E FI+ + D PN IT+ ++
Sbjct: 160 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219
Query: 438 -------------GYIQNGNEDEAVD----LFQRMGKNDKVK-----------RNTASWN 469
G + D V L GK +++ +N SW
Sbjct: 220 SDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWC 279
Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
SL+A Y Q + A ++ + + + I SVL ACA + + IH ++
Sbjct: 280 SLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKA 339
Query: 530 SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLF 589
+E ++ V ++L+D Y K G I S FD M K+++T NSLI GY G AL LF
Sbjct: 340 CVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALF 399
Query: 590 DQM--KSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLY 647
++M + G PN TF+S++ A S AG V+ G K+F S+ Y I P EHYS ++D+
Sbjct: 400 EEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDML 459
Query: 648 GRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQR 707
GR+G +E A EFI+ MPI+P S+W AL ACR+HG L +LA E LF L+P D
Sbjct: 460 GRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHV 519
Query: 708 LILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS 767
L+ +A G+ +A VR+ + + G WI VKN V+ F S + + +
Sbjct: 520 LLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQT 579
Query: 768 WLQNVPENVTARSSHSGLC-----IEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIV 822
L + + A L +EEEEK HSEKLALAF L+ S IRI
Sbjct: 580 TLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLL-SLPLSVPIRIT 638
Query: 823 KNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
KN+R+C CH K+VS EI + D+ H FK+G CSC DYW
Sbjct: 639 KNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 207/464 (44%), Gaps = 35/464 (7%)
Query: 63 LLQACIDSNSIHLARKLHAFL--NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRER 120
LL+ I ++S+ L R +HA + L + F+ L+++Y+K + AR V R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 121 NLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMH 180
N+ +W+++I +++ + + FF M ++G+ P+DF FP +A + GK +H
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 181 SLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGEND 240
+L +K G V S +Y K AR+ F+ + E++ WN+ IS G
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 241 EAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEM-------------------- 280
EA F + R + +TF + + + ++ M++
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI 251
Query: 281 -----VKRMESLGI------TPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGV 329
K++ S I T + +W +++ + QN +A L+ V +
Sbjct: 252 DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDF 311
Query: 330 TITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMI 389
I+S +SAC + L +G IH+ AVK + VG++L++MY KC +E +E+ FD +
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Query: 390 KDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV--PPNVITWNVLISGYIQNGNEDE 447
+K++ + NS+I GY G A LF +M PN +T+ L+S + G +
Sbjct: 372 PEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVEN 431
Query: 448 AVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
+ +F M ++ ++ ++ + G A +KM
Sbjct: 432 GMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKM 475
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 175/442 (39%), Gaps = 75/442 (16%)
Query: 32 LCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI-D 90
L NG + A+ + +G T+ +A +++HA I D
Sbjct: 83 LAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILD 142
Query: 91 VFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQ 150
VFV +Y K DDAR++F+++ ERNL TW+A I D R RE +E F +
Sbjct: 143 VFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRR 202
Query: 151 DGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIW 210
P+ F L AC + G +H LV++ G V N ++ Y KC ++
Sbjct: 203 IDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRS 262
Query: 211 ARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQ 270
+ F M K+ V+W S+++ Y Q E+++A L+ + R++I V T + +I S
Sbjct: 263 SEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLR-SRKDI---VETSDFMISSVLS 318
Query: 271 LGQCDVAMEMVKRMESLGITP-----------------------------------DVFT 295
+E+ + + + + ++ T
Sbjct: 319 ACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVT 378
Query: 296 WTCMISGFAQNGRTSQALDLFKEMSF--VGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
+I G+A G+ AL LF+EM+ G PN +T S +SAC+ A+ GM+I
Sbjct: 379 RNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIF-- 436
Query: 354 AVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKA 413
+S+ + Y E + DM+ +AG +A
Sbjct: 437 -------------DSMRSTYGIEPGAEHYSCIVDMLG---------------RAGMVERA 468
Query: 414 YELFIKMQESDVPPNVITWNVL 435
YE KM + P + W L
Sbjct: 469 YEFIKKMP---IQPTISVWGAL 487
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 336 bits (861), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 219/651 (33%), Positives = 331/651 (50%), Gaps = 79/651 (12%)
Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
P++ W M G A + AL L+ M +G++PN T + +C KA G +I
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDM---------------------- 388
H +K+G D+ V SLI+MY + LE A +VFD
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 389 ---------IKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVIT-------- 431
I KDV SWN+MI+GY + G +A ELF M +++V P+ T
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 432 --------------W-------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRN 464
W N LI Y + G + A LF+R+ D +
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI--- 333
Query: 465 TASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHG 524
SWN+LI GY + AL +F++M S PN VT+LS+LPACA+L A + + IH
Sbjct: 334 --SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV 391
Query: 525 CVLRR--SLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFW 582
+ +R + ++ + SLID YAK G+I + +F+ + K + +WN++I G+ +HG
Sbjct: 392 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 451
Query: 583 HAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSA 642
A+ DLF +M+ G++P+ TF+ ++ A S +GM+DLG+ +F ++T+ Y++ P +EHY
Sbjct: 452 DASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGC 511
Query: 643 MIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGD 702
MIDL G SG +EA E I M +EPD IW +LL AC++HGN++L E L +EP +
Sbjct: 512 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 571
Query: 703 VLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYS 762
L+ IYA G+ + K R L + + G IE+ ++V+ F+ G +
Sbjct: 572 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 631
Query: 763 DLLYSWLQNV-----PENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPH 817
+Y L+ + +S +EEE KE HSEKLA+AF LI S++
Sbjct: 632 REIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI-STKPGT 690
Query: 818 TIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
+ IVKN+R+C +CHE K +S ++ EI D HHF++G CSC DYW
Sbjct: 691 KLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 173 bits (438), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 203/438 (46%), Gaps = 71/438 (16%)
Query: 107 LDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQA 166
L A VF+ ++E NL W+ M ++ ++L+ M+ GL P+ + FP +L++
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 167 CGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAW 226
C F+ G+ +H V+KLG V S++++YV+ G+L A + F+ +D V++
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSY 203
Query: 227 NSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMES 286
++I GY G + A +LFD++ ++ VV++N +I Y + G A+E+ K M
Sbjct: 204 TALIKGYASRGYIENAQKLFDEIPVKD----VVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 287 LGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAM 346
+ PD T ++S AQ+G ++ +
Sbjct: 260 TNVRPDESTMVTVVSACAQSG-----------------------------------SIEL 284
Query: 347 GMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQ 406
G ++H GF ++ + N+LI++YSKC ELE A +F+ + KDV SWN++I GY
Sbjct: 285 GRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTH 344
Query: 407 AGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED-------------------- 446
+A LF +M S PN +T ++ G D
Sbjct: 345 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404
Query: 447 ----EAVDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSS 494
+D++ + G N + ++ +SWN++I G+ G+ + + +F +M+
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI 464
Query: 495 CFYPNCVTILSVLPACAY 512
P+ +T + +L AC++
Sbjct: 465 GIQPDDITFVGLLSACSH 482
Score = 137 bits (344), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 158/357 (44%), Gaps = 65/357 (18%)
Query: 59 TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
T+ +L++C S + +++H L L ++D++V T L+S+Y + G L+DA +VF+
Sbjct: 136 TFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKS 195
Query: 118 RERNL--YT-----------------------------WSAMIGAYSRDQRWREVVELFF 146
R++ YT W+AMI Y+ ++E +ELF
Sbjct: 196 PHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFK 255
Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
M++ + PD+ ++ AC G E G+ +H + G ++ N+++ +Y KCG
Sbjct: 256 DMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
+L A FE + KD ++WN++I GY + EA LF +M R VT ++
Sbjct: 316 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 375
Query: 267 SYNQLGQCDVA------------------------MEMVKRMESLGITPDVF-------- 294
+ LG D+ ++M + + VF
Sbjct: 376 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 435
Query: 295 -TWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
+W MI GFA +GR + DLF M +G+ P+ +T +SAC+ L +G I
Sbjct: 436 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 157/312 (50%), Gaps = 15/312 (4%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFV 93
G EA+ + + + +T + ++ AC S SI L R++H ++ + ++ +
Sbjct: 244 TGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKI 303
Query: 94 KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
L+ +Y+KCG L+ A +FE + +++ +W+ +IG Y+ ++E + LF M++ G
Sbjct: 304 VNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 363
Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKL--GMSCVRRVRNSVLAVYVKCGKLIWA 211
P+D IL AC + G + G+ +H + K G++ +R S++ +Y KCG + A
Sbjct: 364 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA 423
Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
+ F S+ K +WN+MI G+ G D + LF +M + I+ +TF L+ + +
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHS 483
Query: 272 GQCDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFK----EMSFVGVMP 326
G D+ + + M + +TP + + CMI +G LFK ++ + + P
Sbjct: 484 GMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG-------LFKEAEEMINMMEMEP 536
Query: 327 NGVTITSAISAC 338
+GV S + AC
Sbjct: 537 DGVIWCSLLKAC 548
Score = 41.6 bits (96), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 83/219 (37%), Gaps = 73/219 (33%)
Query: 40 EAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNL----VTEIDVFVKT 95
EA+ + + G T +++L AC +I + R +H +++ VT ++T
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASS-LRT 408
Query: 96 KLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD----------QRWREV---- 141
L+ +YAKCG ++ A +VF + ++L +W+AMI ++ R R++
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQP 468
Query: 142 ---------------------VELFFLMVQD--------------------GLF------ 154
+F M QD GLF
Sbjct: 469 DDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEM 528
Query: 155 -------PDDFLFPKILQACGNCGDFEAGKLMHSLVIKL 186
PD ++ +L+AC G+ E G+ +IK+
Sbjct: 529 INMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKI 567
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 333 bits (853), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 192/569 (33%), Positives = 304/569 (53%), Gaps = 37/569 (6%)
Query: 335 ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDV 394
+ CT K L G +H+ ++ F D+++GN+L+NMY+KC LE A +VF+ + +D
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDF 126
Query: 395 YSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS----------------- 437
+W ++I+GY Q A F +M PN T + +I
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGF 186
Query: 438 ----GYIQNGNEDEAV-DLFQRMGKNDKVK--------RNTASWNSLIAGYQQLGQKNNA 484
G+ N + A+ DL+ R G D + RN SWN+LIAG+ + A
Sbjct: 187 CVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKA 246
Query: 485 LGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDT 544
L +F+ M F P+ + S+ AC+ + K +H +++ + N+L+D
Sbjct: 247 LELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 306
Query: 545 YAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTF 604
YAKSG+I +R IFD ++ +D+++WNSL+ Y HGF A+ F++M+ G++PN +F
Sbjct: 307 YAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 605 LSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMP 664
LS++ A S +G++D G + + + I+P HY ++DL GR+G L A+ FIE+MP
Sbjct: 367 LSVLTACSHSGLLDEGWHYY-ELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMP 425
Query: 665 IEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK 724
IEP ++IW+ALL ACR+H N +L A E +F+L+P D ++ IYA G+ DA +
Sbjct: 426 IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAAR 485
Query: 725 VRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESY-SDLLYSW---LQNVPE-NVTAR 779
VRK +E+ + W+E++N ++ FV ++ W L + E
Sbjct: 486 VRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPD 545
Query: 780 SSHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVS 839
+SH + ++++E+E HSEK+ALAFAL+ + TI I KNIR+C CH K S
Sbjct: 546 TSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGS-TIHIKKNIRVCGDCHTAIKLAS 604
Query: 840 MMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
+ EI + D+ HHFK+G CSC DYW
Sbjct: 605 KVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 208/452 (46%), Gaps = 48/452 (10%)
Query: 57 RNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
R Y LL+ C + R +HA L + D+ + LL++YAKCG L++AR+VFE
Sbjct: 60 RRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFE 119
Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
M +R+ TW+ +I YS+ R + + F M++ G P++F +++A
Sbjct: 120 KMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179
Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
G +H +K G V +++L +Y + G + A+ F++++ ++ V+WN++I+G+ +
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 236 IGENDEAHRLFDKMCREE-------------------------------IKLG--VVTF- 261
++A LF M R+ IK G +V F
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFA 299
Query: 262 -NILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMS 320
N L+ Y + G A ++ R+ DV +W +++ +AQ+G +A+ F+EM
Sbjct: 300 GNTLLDMYAKSGSIHDARKIFDRLAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 321 FVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELE 380
VG+ PN ++ S ++AC+ L G + L K G + +++++ + +L
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415
Query: 381 AAER-VFDMIKDKDVYSWNSMIAG---YCQAGYCGKAYELFIKMQESDVPPNVITWNVLI 436
A R + +M + W +++ + A E ++ D P+VI +N+
Sbjct: 416 RALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYA 475
Query: 437 SGYIQNGNEDEAVDLFQRMGKNDKVKRNTASW 468
SG G ++A + ++M ++ K SW
Sbjct: 476 SG----GRWNDAARVRKKMKESGVKKEPACSW 503
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 159/336 (47%), Gaps = 55/336 (16%)
Query: 212 RRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQL 271
RRF+ ++ +K V + +I G AH + + R +I +G N L+ Y +
Sbjct: 60 RRFYNTLLKKCTV-FKLLIQGRIV-----HAH-ILQSIFRHDIVMG----NTLLNMYAKC 108
Query: 272 GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTI 331
G + A ++ ++M D TWT +ISG++Q+ R AL F +M G PN T+
Sbjct: 109 GSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTL 164
Query: 332 TSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKD 391
+S I A + G ++H VK GF +V VG++L+++Y++ ++ A+ VFD ++
Sbjct: 165 SSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALES 224
Query: 392 KDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITW------------------- 432
++ SWN++IAG+ + KA ELF M P+ ++
Sbjct: 225 RNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWV 284
Query: 433 ----------------NVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQ 476
N L+ Y ++G+ +A +F R+ K D V SWNSL+ Y
Sbjct: 285 HAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV-----SWNSLLTAYA 339
Query: 477 QLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAY 512
Q G A+ F +M+ PN ++ LSVL AC++
Sbjct: 340 QHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSH 375
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 173/390 (44%), Gaps = 43/390 (11%)
Query: 156 DDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFF 215
D + +L+ C G+++H+ +++ + N++L +Y KCG L AR+ F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 216 ESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS-------- 267
E M ++D V W ++ISGY Q +A F++M R T + +I++
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 268 ---------------------------YNQLGQCDVAMEMVKRMESLGITPDVFTWTCMI 300
Y + G D A + +ES DV +W +I
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRN---DV-SWNALI 234
Query: 301 SGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFT 360
+G A+ T +AL+LF+ M G P+ + S AC+ L G +H+ +K G
Sbjct: 235 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 361 DDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKM 420
GN+L++MY+K + A ++FD + +DV SWNS++ Y Q G+ +A F +M
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 421 QESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQ 480
+ + PN I++ +++ +G DE ++ M K D + + +++ + G
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGD 413
Query: 481 KNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
N AL +M P ++L AC
Sbjct: 414 LNRALRFIEEMP---IEPTAAIWKALLNAC 440
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 328 bits (842), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 223/794 (28%), Positives = 388/794 (48%), Gaps = 98/794 (12%)
Query: 90 DVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMV 149
DV K+++ Y+K + A F M R++ +W++M+ Y ++ + +E+F M
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 150 QDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLI 209
++G+ D F IL+ C D G +H +V+++G +++L +Y K + +
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 232
Query: 210 WARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYN 269
+ R F+ + EK+ V+W+++I+G Q A + F +M + + + ++RS
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292
Query: 270 QLGQ-------------CDVAMEMVKRMESLGITPD---------VF---------TWTC 298
L + D A + + R +L + +F ++
Sbjct: 293 ALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNA 352
Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMG 358
MI+G++Q +AL LF + G+ + ++++ AC +K L+ G++I+ LA+K
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 359 FTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYE--- 415
+ DV V N+ I+MY KC+ L A RVFD ++ +D SWN++IA + Q G K YE
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG---KGYETLF 469
Query: 416 LFIKMQESDVPPNVITWNV----------------------------------LISGYIQ 441
LF+ M S + P+ T+ LI Y +
Sbjct: 470 LFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 529
Query: 442 NGNEDEAVDL----FQRMG-----------KNDKVKRNTASWNSLIAGYQQLGQKNNALG 486
G +EA + FQR N +++ SWNS+I+GY Q +A
Sbjct: 530 CGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 589
Query: 487 VFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
+F +M P+ T +VL CA L ++ K+IH V+++ L+S + + ++L+D Y+
Sbjct: 590 LFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYS 649
Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
K G++ SR +F+ +D +TWN++ICGY HG A+ LF++M +KPN TF+S
Sbjct: 650 KCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFIS 709
Query: 607 IILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
I+ A + G++D G + F + Y + P + HYS M+D+ G+SGK++ A+E I +MP E
Sbjct: 710 ILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFE 769
Query: 667 PDSSIWEALLTACRIH-GNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKV 725
D IW LL C IH N+++A A L L+P D L+ +YA G E +
Sbjct: 770 ADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDL 829
Query: 726 RKLERENTRRNSFGQCWIEVKNLVYTFVTGG-----WSESYSD--LLYSWLQNVPENVTA 778
R+ R + G W+E+K+ ++ F+ G W E Y + L+YS ++ ++
Sbjct: 830 RRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDDSSFV 889
Query: 779 RSSHSGLCIEEEEK 792
R G+ +EEE++
Sbjct: 890 R----GVEVEEEDQ 899
Score = 185 bits (470), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 161/639 (25%), Positives = 289/639 (45%), Gaps = 90/639 (14%)
Query: 148 MVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGK 207
M+ G P F+ +LQ N DF + ++ K+ + V N ++ Y K
Sbjct: 74 MIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFD---KMPLRDVVSW-NKMINGYSKSND 129
Query: 208 LIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS 267
+ A FF M +D V+WNSM+SGY Q GE+ ++ +F M RE I+ TF I+++
Sbjct: 130 MFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKV 189
Query: 268 YNQLGQCDVAMEMVKRMESLGITPDVF-------------------------------TW 296
+ L + M++ + +G DV +W
Sbjct: 190 CSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSW 249
Query: 297 TCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVK 356
+ +I+G QN S AL FKEM V + S + +C L L +G ++H+ A+K
Sbjct: 250 SAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALK 309
Query: 357 MGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
F D +V + ++MY+KC+ ++ A+ +FD ++ + S+N+MI GY Q + KA L
Sbjct: 310 SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLL 369
Query: 417 FIKMQESDVPPNVITWN------VLISGYIQNGN----------------EDEAVDLF-- 452
F ++ S + + I+ + L+ G + + A+D++
Sbjct: 370 FHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGK 429
Query: 453 -QRMGKNDKV-----KRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
Q + + +V +R+ SWN++IA ++Q G+ L +F M S P+ T S+
Sbjct: 430 CQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSI 489
Query: 507 LPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNI-----VYSRTI---- 557
L AC + EIH +++ + S+ V SLID Y+K G I ++SR
Sbjct: 490 LKACTGGSLGYGM-EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN 548
Query: 558 -------FDGMSSKDI----ITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
+ M +K + ++WNS+I GYV+ A LF +M G+ P++ T+ +
Sbjct: 549 VSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYAT 608
Query: 607 IILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
++ + LGK++ + + ++ + S ++D+Y + G L ++ E +
Sbjct: 609 VLDTCANLASAGLGKQIHAQVIK-KELQSDVYICSTLVDMYSKCGDLHDSRLMFEK-SLR 666
Query: 667 PDSSIWEALLTACRIHGNIDLAVLAIERLF--DLEPGDV 703
D W A++ HG + A+ ER+ +++P V
Sbjct: 667 RDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHV 705
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/566 (24%), Positives = 254/566 (44%), Gaps = 54/566 (9%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF-LNLVTEIDVFV 93
N L+ A+ + A V ++ Y ++L++C + + L +LHA L D V
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIV 318
Query: 94 KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
+T L +YAKC + DA+ +F++ N +++AMI YS+++ + + LF ++ GL
Sbjct: 319 RTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL 378
Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
D+ + +AC G ++ L IK +S V N+ + +Y KC L A R
Sbjct: 379 GFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFR 438
Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRS------ 267
F+ M +D V+WN++I+ + Q G+ E LF M R I+ TF ++++
Sbjct: 439 VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL 498
Query: 268 ----------------------------YNQLGQCDVA----------------MEMVKR 283
Y++ G + A ME +++
Sbjct: 499 GYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEK 558
Query: 284 MESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKA 343
M + + +W +ISG+ ++ A LF M +G+ P+ T + + C +L +
Sbjct: 559 MHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLAS 618
Query: 344 LAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAG 403
+G +IH+ +K DV + ++L++MYSKC +L + +F+ +D +WN+MI G
Sbjct: 619 AGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICG 678
Query: 404 YCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKR 463
Y G +A +LF +M ++ PN +T+ ++ G D+ ++ F M ++ +
Sbjct: 679 YAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDP 738
Query: 464 NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIH 523
+++++ + G+ AL + R+M F + V ++L C + +V E
Sbjct: 739 QLPHYSNMVDILGKSGKVKRALELIREMP---FEADDVIWRTLLGVCTIHRNNVEVAEEA 795
Query: 524 GCVLRRSLESSLPVMNSLIDTYAKSG 549
L R L + YA +G
Sbjct: 796 TAALLRLDPQDSSAYTLLSNVYADAG 821
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 154/629 (24%), Positives = 277/629 (44%), Gaps = 85/629 (13%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVT-EIDVFV 93
NG ++I V + +G + T+ +L+ C L ++H + V + DV
Sbjct: 158 NGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVA 217
Query: 94 KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
+ LL +YAK ++ VF+ + E+N +WSA+I ++ ++ F M +
Sbjct: 218 ASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNA 277
Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
++ +L++C + G +H+ +K + VR + L +Y KC + A+
Sbjct: 278 GVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQI 337
Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCR-----EEIKL------------ 256
F++ + + ++N+MI+GY Q +A LF ++ +EI L
Sbjct: 338 LFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKG 397
Query: 257 ---GVVTFNILIRSYNQLGQC--DVAMEMVKRMESLGITPDVF---------TWTCMISG 302
G+ + + I+S L C + A++M + ++L VF +W +I+
Sbjct: 398 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
Query: 303 FAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDD 362
QNG+ + L LF M + P+ T S + ACT +L GMEIHS VK G +
Sbjct: 458 HEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASN 516
Query: 363 VLVGNSLINMYSKCEELEAAERV----------------FDMIKDKDV----YSWNSMIA 402
VG SLI+MYSKC +E AE++ + + +K + SWNS+I+
Sbjct: 517 SSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIIS 576
Query: 403 GYCQAGYCGKAYELFIKMQESDVPPNVITWNVLI----------------SGYIQNGNED 446
GY A LF +M E + P+ T+ ++ + I+ +
Sbjct: 577 GYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQS 636
Query: 447 EA------VDLFQRMGK--------NDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQ 492
+ VD++ + G ++R+ +WN++I GY G+ A+ +F +M
Sbjct: 637 DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Query: 493 SSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR-SLESSLPVMNSLIDTYAKSGNI 551
PN VT +S+L ACA++ +K E + R L+ LP ++++D KSG +
Sbjct: 697 LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKV 756
Query: 552 VYSRTIFDGMS-SKDIITWNSLICGYVLH 579
+ + M D + W +L+ +H
Sbjct: 757 KRALELIREMPFEADDVIWRTLLGVCTIH 785
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 154/334 (46%), Gaps = 46/334 (13%)
Query: 327 NGVTITS---AISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
N V+ T+ C AL +G + H+ + GF V N L+ +Y+ + +A
Sbjct: 44 NSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSAS 103
Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
VFD + +DV SWN MI GY ++ KA F M D V++WN ++SGY+QNG
Sbjct: 104 MVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRD----VVSWNSMLSGYLQNG 159
Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
+++++F MG+ G + G+ T
Sbjct: 160 ESLKSIEVFVDMGRE---------------GIEFDGR---------------------TF 183
Query: 504 LSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSS 563
+L C++L ++ +IHG V+R ++ + ++L+D YAK V S +F G+
Sbjct: 184 AIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPE 243
Query: 564 KDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKV 623
K+ ++W+++I G V + AL F +M+ ++ + S++ + + + LG ++
Sbjct: 244 KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQL 303
Query: 624 FC-SITECYQIIPMIEHYSAMIDLYGRSGKLEEA 656
++ + ++ +A +D+Y + +++A
Sbjct: 304 HAHALKSDFAADGIVR--TATLDMYAKCDNMQDA 335
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 94/232 (40%), Gaps = 43/232 (18%)
Query: 506 VLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKD 565
V CA A K+ H ++ + V+N L+ Y S + V + +FD M +D
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 566 IITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNR-----GTFLSIILAH-----SLAG 615
+++WN +I GY + D+F F + P R + LS L + S+
Sbjct: 114 VVSWNKMINGY------SKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEV 167
Query: 616 MVDLGK-------KVF------CSITECYQIIPMIE-------------HYSAMIDLYGR 649
VD+G+ + F CS E + I SA++D+Y +
Sbjct: 168 FVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK 227
Query: 650 SGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEPG 701
+ E++ + +P E +S W A++ C + + LA+ + + + G
Sbjct: 228 GKRFVESLRVFQGIP-EKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAG 278
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 327 bits (837), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 184/619 (29%), Positives = 325/619 (52%), Gaps = 47/619 (7%)
Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
P +F W +I G+++N AL ++ M V P+ T + AC+ L L MG +
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFV 141
Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFD--MIKDKDVYSWNSMIAGYCQAG 408
H+ ++GF DV V N LI +Y+KC L +A VF+ + ++ + SW ++++ Y Q G
Sbjct: 142 HAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNG 201
Query: 409 YCGKAYELFIKMQESDVPPNVITWNVLISGY--IQNGNEDEAVD---------------- 450
+A E+F +M++ DV P+ + +++ + +Q+ + ++
Sbjct: 202 EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI 261
Query: 451 ----LFQRMGKN-------DKVKR-NTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYP 498
++ + G+ DK+K N WN++I+GY + G A+ +F +M + P
Sbjct: 262 SLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIF 558
+ ++I S + ACA + + + + ++ V R + + ++LID +AK G++ +R +F
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVF 381
Query: 559 DGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVD 618
D +D++ W+++I GY LHG A+ L+ M+ G+ PN TFL +++A + +GMV
Sbjct: 382 DRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVR 441
Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
G F + + ++I P +HY+ +IDL GR+G L++A E I+ MP++P ++W ALL+A
Sbjct: 442 EGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
C+ H +++L A ++LF ++P + + +YA + +VR +E
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV 560
Query: 739 GQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC---------IEE 789
G W+EV+ + F G S Y ++ E + +R G + +
Sbjct: 561 GCSWVEVRGRLEAFRVGDKSHPR----YEEIERQVEWIESRLKEGGFVANKDASLHDLND 616
Query: 790 EEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLA 849
EE EE HSE++A+A+ LI + Q +RI KN+R CV+CH K +S + EI +
Sbjct: 617 EEAEETLCSHSERIAIAYGLISTPQGT-PLRITKNLRACVNCHAATKLISKLVDREIVVR 675
Query: 850 DSKCLHHFKNGQCSCGDYW 868
D+ HHFK+G CSCGDYW
Sbjct: 676 DTNRFHHFKDGVCSCGDYW 694
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 232/472 (49%), Gaps = 46/472 (9%)
Query: 77 RKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
+++HA L L + F+ TKL+ + G + AR+VF+D+ ++ W+A+I YSR+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
+++ + ++ M + PD F FP +L+AC + G+ +H+ V +LG V+
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 196 NSVLAVYVKCGKLIWARRFFESMD--EKDGVAWNSMISGYFQIGENDEAHRLFDKM---- 249
N ++A+Y KC +L AR FE + E+ V+W +++S Y Q GE EA +F +M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 250 ----------------CREEIKLG------VVTFNILIRS---------YNQLGQCDVAM 278
C +++K G VV + I Y + GQ A
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 279 EMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISAC 338
+ +M+S P++ W MISG+A+NG +A+D+F EM V P+ ++ITSAISAC
Sbjct: 278 ILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISAC 333
Query: 339 TDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWN 398
+ +L ++ + + DDV + ++LI+M++KC +E A VFD D+DV W+
Sbjct: 334 AQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWS 393
Query: 399 SMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKN 458
+MI GY G +A L+ M+ V PN +T+ L+ +G E F RM +
Sbjct: 394 AMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-D 452
Query: 459 DKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPAC 510
K+ + +I + G + A V + M P ++L AC
Sbjct: 453 HKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP---VQPGVTVWGALLSAC 501
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 187/414 (45%), Gaps = 68/414 (16%)
Query: 59 TYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE-- 115
T+ +LL+AC + + + R +HA L + DVFV+ L+++YAKC L AR VFE
Sbjct: 121 TFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGL 180
Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
+ ER + +W+A++ AY+++ E +E+F M + + PD +L A D +
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQ 240
Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
G+ +H+ V+K+G+ + S+ +Y KCG++ A+ F+ M + + WN+MISGY +
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAK 300
Query: 236 IGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVF- 294
G EA +F +M ++++ ++ I + Q+G + A M + + DVF
Sbjct: 301 NGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 295 ------------------------------TWTCMISGFAQNGRTSQALDLFKEMSFVGV 324
W+ MI G+ +GR +A+ L++ M GV
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420
Query: 325 MPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAER 384
PN VT + AC HS V+ G+ + + IN + +
Sbjct: 421 HPNDVTFLGLLMACN-----------HSGMVREGWWFFNRMADHKIN-----PQQQHYAC 464
Query: 385 VFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISG 438
V D++ +AG+ +AYE+ M V P V W L+S
Sbjct: 465 VIDLLG---------------RAGHLDQAYEVIKCMP---VQPGVTVWGALLSA 500
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 163/362 (45%), Gaps = 14/362 (3%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFV 93
NG EA+ + + K +++L A + R +HA + + EI+ +
Sbjct: 200 NGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259
Query: 94 KTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGL 153
L ++YAKCG + A+ +F+ M+ NL W+AMI Y+++ RE +++F M+ +
Sbjct: 260 LISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319
Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
PD + AC G E + M+ V + + ++++ ++ KCG + AR
Sbjct: 320 RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARL 379
Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
F+ ++D V W++MI GY G EA L+ M R + VTF L+ + N G
Sbjct: 380 VFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGM 439
Query: 274 CDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITS 333
RM I P + C+I + G QA ++ K M V P GVT+
Sbjct: 440 VREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMP---VQP-GVTVWG 495
Query: 334 A-ISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
A +SAC + + +G A + F+ D S Y + L AA R++D + +
Sbjct: 496 ALLSACKKHRHVELG----EYAAQQLFSID----PSNTGHYVQLSNLYAAARLWDRVAEV 547
Query: 393 DV 394
V
Sbjct: 548 RV 549
Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 93/188 (49%), Gaps = 8/188 (4%)
Query: 518 KVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYV 577
++K+IH +L L+ S ++ LI + G+I ++R +FD + I WN++I GY
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 578 LHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC-YQIIPM 636
+ + AL ++ M+ + P+ TF ++ A S + +G+ V + +
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 637 IEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSI--WEALLTACRIHGNI--DLAVLAI 692
++ + +I LY + +L A E +P+ P+ +I W A+++A +G L + +
Sbjct: 156 VQ--NGLIALYAKCRRLGSARTVFEGLPL-PERTIVSWTAIVSAYAQNGEPMEALEIFSQ 212
Query: 693 ERLFDLEP 700
R D++P
Sbjct: 213 MRKMDVKP 220
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 325 bits (833), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 215/718 (29%), Positives = 349/718 (48%), Gaps = 56/718 (7%)
Query: 193 RVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNS-----MISGYFQIGENDEAHRLFD 247
+V N L K KL A F + MD K GV+ +S + ++ L D
Sbjct: 49 QVENLHLVSLSKHRKLNEAFEFLQEMD-KAGVSVSSYSYQCLFEACRELRSLSHGRLLHD 107
Query: 248 KMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNG 307
+M V+ N +++ Y + + A ++ M L + + T MIS +A+ G
Sbjct: 108 RMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSEL----NAVSRTTMISAYAEQG 163
Query: 308 RTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGN 367
+A+ LF M G P T+ + + + +AL G +IH+ ++ G + +
Sbjct: 164 ILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIET 223
Query: 368 SLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPP 427
++NMY KC L A+RVFD + K + ++ GY QAG A +LF+ + V
Sbjct: 224 GIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEW 283
Query: 428 NVITWNV-----------------------------------LISGYIQNGNEDEAVDLF 452
+ ++V L+ YI+ + + A F
Sbjct: 284 DSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAF 343
Query: 453 QRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQS-SCFYPNCVTILSVLPACA 511
Q + + N SW+++I+GY Q+ Q A+ F+ ++S + N T S+ AC+
Sbjct: 344 QEIREP-----NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACS 398
Query: 512 YLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNS 571
L N ++H ++RSL S ++LI Y+K G + + +F+ M + DI+ W +
Sbjct: 399 VLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTA 458
Query: 572 LICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECY 631
I G+ +G AL LF++M S G+KPN TF++++ A S AG+V+ GK ++ Y
Sbjct: 459 FISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKY 518
Query: 632 QIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLA 691
+ P I+HY MID+Y RSG L+EA++F+++MP EPD+ W+ L+ C H N++L +A
Sbjct: 519 NVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIA 578
Query: 692 IERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYT 751
E L L+P D L +Y GK E+A ++ KL E + WI+ K ++
Sbjct: 579 GEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHR 638
Query: 752 FVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLCIEEEEKEEISGIHSEKLALAFALIG 811
F+ G + +Y L+ + C E +E++ HSE+LA+AF LI
Sbjct: 639 FIVGDKHHPQTQEIYEKLKEFDGFMEGDMFQ---CNMTERREQLLD-HSERLAIAFGLIS 694
Query: 812 -SSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
AP I++ KN+R C CHE AK+VS++ EI + DS+ HHFK G+CSC DYW
Sbjct: 695 VHGNAPAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 187 bits (474), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 134/540 (24%), Positives = 250/540 (46%), Gaps = 37/540 (6%)
Query: 23 RFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAF 82
+ + HL L + +LNEA L + G V +Y L +AC + S+ R LH
Sbjct: 49 QVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDR 108
Query: 83 LNL-VTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREV 141
+ + + V ++ +L +Y +C L+DA ++F++M E N + + MI AY+ +
Sbjct: 109 MRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKA 168
Query: 142 VELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAV 201
V LF M+ G P ++ +L++ N + G+ +H+ VI+ G+ + ++ +
Sbjct: 169 VGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNM 228
Query: 202 YVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF 261
YVKCG L+ A+R F+ M K VA ++ GY Q G +A +LF + E ++ F
Sbjct: 229 YVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVF 288
Query: 262 NILIRSYNQLGQCDVAMEMVKRMESLGI-------------------------------T 290
++++++ L + ++ ++ + LG+
Sbjct: 289 SVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIRE 348
Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEM-SFVGVMPNGVTITSAISACTDLKALAMGME 349
P+ +W+ +ISG+ Q + +A+ FK + S + N T TS AC+ L +G +
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQ 408
Query: 350 IHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGY 409
+H+ A+K ++LI MYSKC L+ A VF+ + + D+ +W + I+G+ G
Sbjct: 409 VHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGN 468
Query: 410 CGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWN 469
+A LF KM + PN +T+ +++ G ++ M + V ++
Sbjct: 469 ASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYD 528
Query: 470 SLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRR 529
+I Y + G + AL + M F P+ ++ L C + + ++ EI G LR+
Sbjct: 529 CMIDIYARSGLLDEALKFMKNMP---FEPDAMSWKCFLSGC-WTHKNLELGEIAGEELRQ 584
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 173/360 (48%), Gaps = 7/360 (1%)
Query: 36 GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVK 94
GR +A+ + + T+G + + +L+AC ++L +++HA + L E +V V
Sbjct: 264 GRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVG 323
Query: 95 TKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELF-FLMVQDGL 153
T L+ Y KC + A F+++RE N +WSA+I Y + ++ E V+ F L ++
Sbjct: 324 TPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAS 383
Query: 154 FPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARR 213
+ F + I QAC D G +H+ IK + + ++++ +Y KCG L A
Sbjct: 384 ILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANE 443
Query: 214 FFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQ 273
FESMD D VAW + ISG+ G EA RLF+KM +K VTF ++ + + G
Sbjct: 444 VFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGL 503
Query: 274 CDVAMEMVKRM-ESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
+ + M + P + + CMI +A++G +AL K M F P+ ++
Sbjct: 504 VEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPF---EPDAMSWK 560
Query: 333 SAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDK 392
+S C K L +G EI ++ +D N+Y+ + E A + ++ ++
Sbjct: 561 CFLSGCWTHKNLELG-EIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNER 619
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 190/613 (30%), Positives = 314/613 (51%), Gaps = 36/613 (5%)
Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
P++F + +I+GF N + LDLF + G+ +G T + ACT + +G+++
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
HSL VK GF DV SL+++YS L A ++FD I D+ V +W ++ +GY +G
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRH 193
Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEA---------------------- 448
+A +LF KM E V P+ ++S + G+ D
Sbjct: 194 REAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTL 253
Query: 449 VDLFQRMGKNDK--------VKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNC 500
V+L+ + GK +K V+++ +W+++I GY + +F +M P+
Sbjct: 254 VNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQ 313
Query: 501 VTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDG 560
+I+ L +CA L A + + + R ++L + N+LID YAK G + +F
Sbjct: 314 FSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKE 373
Query: 561 MSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLG 620
M KDI+ N+ I G +G + +F Q + G+ P+ TFL ++ AG++ G
Sbjct: 374 MKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDG 433
Query: 621 KKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTACR 680
+ F +I+ Y + +EHY M+DL+GR+G L++A I DMP+ P++ +W ALL+ CR
Sbjct: 434 LRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCR 493
Query: 681 IHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSFGQ 740
+ + LA ++ L LEP + + IY++ G+ ++A +VR + + + G
Sbjct: 494 LVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGY 553
Query: 741 CWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVPENV-----TARSSHSGLCIEEEEKEEI 795
WIE++ V+ F+ S SD +Y+ L+++ + + +EEEEKE +
Sbjct: 554 SWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERV 613
Query: 796 SGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLH 855
G HSEKLA+A LI S+ IR+VKN+R+C CHE K +S + EI + D+ H
Sbjct: 614 LGYHSEKLAVALGLI-STDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFH 672
Query: 856 HFKNGQCSCGDYW 868
F NG CSC DYW
Sbjct: 673 CFTNGSCSCNDYW 685
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 211/434 (48%), Gaps = 25/434 (5%)
Query: 17 TKKSNPRFRDTHLDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLA 76
T+ N ++ ++ N +E + + SI G + T+ +L+AC ++S L
Sbjct: 71 TQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLG 130
Query: 77 RKLHAFL-NLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRD 135
LH+ + DV T LLS+Y+ G L+DA ++F+++ +R++ TW+A+ Y+
Sbjct: 131 IDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTS 190
Query: 136 QRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVR 195
R RE ++LF MV+ G+ PD + ++L AC + GD ++G+ + + ++ M VR
Sbjct: 191 GRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR 250
Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIK 255
+++ +Y KCGK+ AR F+SM EKD V W++MI GY E LF +M +E +K
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLK 310
Query: 256 LGVVTFNILIRSYNQLGQCDV---AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQA 312
+ + S LG D+ + ++ R E L ++F +I +A+ G ++
Sbjct: 311 PDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFL---TNLFMANALIDMYAKCGAMARG 367
Query: 313 LDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINM 372
++FKEM + V + +AIS + + + K+G + D G++ + +
Sbjct: 368 FEVFKEMKEKDI----VIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD---GSTFLGL 420
Query: 373 YSKCEE---LEAAERVFDMIK-----DKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESD 424
C ++ R F+ I + V + M+ + +AG AY L M
Sbjct: 421 LCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMP--- 477
Query: 425 VPPNVITWNVLISG 438
+ PN I W L+SG
Sbjct: 478 MRPNAIVWGALLSG 491
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 203/440 (46%), Gaps = 35/440 (7%)
Query: 113 VFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGD 172
+F + N++ ++++I + + + E ++LF + + GL+ F FP +L+AC
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 173 FEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISG 232
+ G +HSLV+K G + S+L++Y G+L A + F+ + ++ V W ++ SG
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 233 YFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDVAMEMVKRMESLG---- 288
Y G + EA LF KM +K ++ + +G D +VK ME +
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 289 ---------------------------ITPDVFTWTCMISGFAQNGRTSQALDLFKEMSF 321
+ D+ TW+ MI G+A N + ++LF +M
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 322 VGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEA 381
+ P+ +I +S+C L AL +G SL + F ++ + N+LI+MY+KC +
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQ 441
VF +K+KD+ N+ I+G + G+ ++ +F + ++ + P+ T+ L+ G +
Sbjct: 367 GFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVH 426
Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
G + + F + +KR + ++ + + G ++A +R + PN +
Sbjct: 427 AGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDA---YRLICDMPMRPNAI 483
Query: 502 TILSVLPACAYLVASNKVKE 521
++L C LV ++ E
Sbjct: 484 VWGALLSGCR-LVKDTQLAE 502
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 188/444 (42%), Gaps = 48/444 (10%)
Query: 12 LHSLLTK---KSNPRFRDTHLDFLCGNGRLNEAITVLDSI---------------ATQGA 53
LHSL+ K + + L G+GRLN+A + D I T G
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGR 192
Query: 54 K--------------VRRNTY--INLLQACIDSNSIHLARKLHAFL-NLVTEIDVFVKTK 96
V+ ++Y + +L AC+ + + ++ + + + FV+T
Sbjct: 193 HREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTT 252
Query: 97 LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPD 156
L+++YAKCG ++ AR VF+ M E+++ TWS MI Y+ + +E +ELF M+Q+ L PD
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPD 312
Query: 157 DFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
F L +C + G + G+ SL+ + + N+++ +Y KCG + F+
Sbjct: 313 QFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFK 372
Query: 217 SMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLGQCDV 276
M EKD V N+ ISG + G + +F + + I TF L+ G
Sbjct: 373 EMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQD 432
Query: 277 AMEMVKRMESL-GITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAI 335
+ + + + V + CM+ + + G A L +M + PN + + +
Sbjct: 433 GLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMP---MRPNAIVWGALL 489
Query: 336 SACTDLKALAMGMEIHSLAVKMGFTDDVLVGN--SLINMYSKCEELEAAERVFDMIKDKD 393
S C +K + + + + + GN L N+YS + A V DM+ K
Sbjct: 490 SGCRLVKDTQLAETVLKELIAL---EPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKG 546
Query: 394 VYSWNSMIAGYCQAGYCGKAYELF 417
+ I GY GK +E
Sbjct: 547 M----KKIPGYSWIELEGKVHEFL 566
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 517 NKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGY 576
N +K+IH ++ L ++N L+ YS +F +I +NSLI G+
Sbjct: 27 NHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGF 86
Query: 577 VLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITEC------ 630
V + +H LDLF ++ GL + TF ++ A + A LG + + +C
Sbjct: 87 VNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDV 146
Query: 631 ----------------------YQIIP--MIEHYSAMIDLYGRSGKLEEAMEFIE---DM 663
+ IP + ++A+ Y SG+ EA++ + +M
Sbjct: 147 AAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEM 206
Query: 664 PIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLE-PGDVLIQRLILQIYAICGKPEDA 722
++PDS +L+AC G++D ++ + ++E + ++ ++ +YA CGK E A
Sbjct: 207 GVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKA 266
Query: 723 LKV 725
V
Sbjct: 267 RSV 269
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 210/748 (28%), Positives = 361/748 (48%), Gaps = 80/748 (10%)
Query: 196 NSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREE-- 253
N++++ +VK G + AR F++M ++ V W ++ Y + DEA +LF +MCR
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 254 -------------------------------IKLGVVT------FNILIRSYNQLGQCDV 276
+KLG T N+L++SY ++ + D+
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 277 AMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAIS 336
A + + + D T+ +I+G+ ++G ++++ LF +M G P+ T + +
Sbjct: 203 ACVLFEEIPE----KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLK 258
Query: 337 ACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYS 396
A L A+G ++H+L+V GF+ D VGN +++ YSK + + +FD + + D S
Sbjct: 259 AVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVS 318
Query: 397 WNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLIS-----GYIQNGNE------ 445
+N +I+ Y QA + F +MQ + ++S +Q G +
Sbjct: 319 YNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL 378
Query: 446 -----------DEAVDLFQRMGKNDKV--------KRNTASWNSLIAGYQQLGQKNNALG 486
+ VD++ + ++ +R T SW +LI+GY Q G L
Sbjct: 379 LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLK 438
Query: 487 VFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYA 546
+F KM+ S + T +VL A A + K++H ++R ++ + L+D YA
Sbjct: 439 LFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYA 498
Query: 547 KSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLS 606
K G+I + +F+ M ++ ++WN+LI + +G AA+ F +M GL+P+ + L
Sbjct: 499 KCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILG 558
Query: 607 IILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIE 666
++ A S G V+ G + F +++ Y I P +HY+ M+DL GR+G+ EA + +++MP E
Sbjct: 559 VLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFE 618
Query: 667 PDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP-GDVLIQRLILQIYAICGKPEDALKV 725
PD +W ++L ACRIH N LA A E+LF +E D + IYA G+ E V
Sbjct: 619 PDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDV 678
Query: 726 RKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYSWLQNVP-----ENVTARS 780
+K RE + W+EV + ++ F + + D + + + E +
Sbjct: 679 KKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDT 738
Query: 781 SHSGLCIEEEEKEEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSM 840
S ++E+ K E HSE+LA+AFALI + + I ++KN+R C CH K +S
Sbjct: 739 SSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGC-PIVVMKNLRACRDCHAAIKLISK 797
Query: 841 MHHCEIFLADSKCLHHFKNGQCSCGDYW 868
+ EI + D+ HHF G CSCGDYW
Sbjct: 798 IVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 144/566 (25%), Positives = 252/566 (44%), Gaps = 99/566 (17%)
Query: 97 LLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG--LF 154
++S + K G + AR++F+ M +R + TW+ ++G Y+R+ + E +LF M +
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 155 PDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSC--VRRVRNSVLAVYVKCGKLIWAR 212
PD F +L C + A +H+ +KLG V N +L Y + +L A
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
FE + EKD V +N++I+GY + G E+ LF KM + + TF+ ++++ +G
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAV--VG 262
Query: 273 QCDVAMEMVKRMESLGITP-----------------------------------DVFTWT 297
D A+ +++ +L +T D ++
Sbjct: 263 LHDFALG--QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYN 320
Query: 298 CMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKM 357
+IS ++Q + +L F+EM +G + +S +L +L MG ++H A+ +
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL-L 379
Query: 358 GFTDDVL-VGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYEL 416
D +L VGNSL++MY+KCE E AE +F + + SW ++I+GY Q G G +L
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 417 FIKMQESDVPP-----------------------------------NVITWNVLISGYIQ 441
F KM+ S++ NV + + L+ Y +
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAK 499
Query: 442 NGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCV 501
G+ +AV +F+ M RN SWN+LI+ + G A+G F KM S P+ V
Sbjct: 500 CGSIKDAVQVFEEMP-----DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554
Query: 502 TILSVLPACAYLVASNKVKE-------IHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYS 554
+IL VL AC++ + E I+G ++ + ++D ++G +
Sbjct: 555 SILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA------CMLDLLGRNGRFAEA 608
Query: 555 RTIFDGMS-SKDIITWNSLICGYVLH 579
+ D M D I W+S++ +H
Sbjct: 609 EKLMDEMPFEPDEIMWSSVLNACRIH 634
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 222/487 (45%), Gaps = 39/487 (8%)
Query: 59 TYINLLQACIDSNSIHLARKLHAF---LNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFE 115
T+ LL C D+ + ++HAF L T + V LL Y + LD A +FE
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 116 DMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEA 175
++ E++ T++ +I Y +D + E + LF M Q G P DF F +L+A DF
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 176 GKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
G+ +H+L + G S V N +L Y K +++ R F+ M E D V++N +IS Y Q
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 236 IGENDEAHRLFDKM-CR-------------------EEIKLG--------VVTFNILIRS 267
+ + + F +M C +++G + T + ++
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 268 YNQL----GQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVG 323
N L +C++ E +SL V +WT +ISG+ Q G L LF +M
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTV-SWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 324 VMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAE 383
+ + T + + A +L +G ++H+ ++ G ++V G+ L++MY+KC ++ A
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 384 RVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNG 443
+VF+ + D++ SWN++I+ + G A F KM ES + P+ ++ +++ G
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 444 NEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTI 503
++ + FQ M + + ++ LG+ + M F P+ +
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACML---DLLGRNGRFAEAEKLMDEMPFEPDEIMW 624
Query: 504 LSVLPAC 510
SVL AC
Sbjct: 625 SSVLNAC 631
Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 150/315 (47%), Gaps = 47/315 (14%)
Query: 355 VKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAY 414
+K GF D N ++ + ++ AA +V+D + K+ S N+MI+G+ + G A
Sbjct: 40 IKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSAR 99
Query: 415 ELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAG 474
+LF M + V+TW +L+ Y +N + DEA LF++M ++
Sbjct: 100 DLFDAMPDR----TVVTWTILMGWYARNSHFDEAFKLFRQMCRS---------------- 139
Query: 475 YQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESS 534
SSC P+ VT ++LP C V N V ++H ++ +++
Sbjct: 140 ------------------SSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTN 181
Query: 535 --LPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQM 592
L V N L+ +Y + + + +F+ + KD +T+N+LI GY G + ++ LF +M
Sbjct: 182 PFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM 241
Query: 593 KSFGLKPNRGTFLSIILAHSLAGMVD--LGKKVFC-SITECYQIIPMIEHYSAMIDLYGR 649
+ G +P+ TF ++ A + G+ D LG+++ S+T + + + ++D Y +
Sbjct: 242 RQSGHQPSDFTFSGVLKA--VVGLHDFALGQQLHALSVTTGFSRDASVGN--QILDFYSK 297
Query: 650 SGKLEEAMEFIEDMP 664
++ E ++MP
Sbjct: 298 HDRVLETRMLFDEMP 312
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/464 (23%), Positives = 193/464 (41%), Gaps = 77/464 (16%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLVTEI--DVF 92
+G E+I + + G + T+ +L+A + + L ++LHA L++ T D
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA-LSVTTGFSRDAS 286
Query: 93 VKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
V ++L Y+K + + R +F++M E + +++ +I +YS+ ++ + F M G
Sbjct: 287 VGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
+F F +L N + G+ +H + + V NS++ +Y KC A
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAE 406
Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTF----------- 261
F+S+ ++ V+W ++ISGY Q G + +LF KM ++ TF
Sbjct: 407 LIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFA 466
Query: 262 ---------NILIRSYN------------QLGQCDVAMEMVKRMESLGITPD--VFTWTC 298
+IRS N +C + V+ E + PD +W
Sbjct: 467 SLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEM---PDRNAVSWNA 523
Query: 299 MISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGME-------IH 351
+IS A NG A+ F +M G+ P+ V+I ++AC+ + G E I+
Sbjct: 524 LISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIY 583
Query: 352 SLAVK--------------------------MGFTDDVLVGNSLINM--YSKCEEL--EA 381
+ K M F D ++ +S++N K + L A
Sbjct: 584 GITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERA 643
Query: 382 AERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDV 425
AE++F M K +D ++ SM Y AG K ++ M+E +
Sbjct: 644 AEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
Score = 40.8 bits (94), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 39/74 (52%)
Query: 519 VKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVL 578
+ + +++ ++ N +++ + G + +R ++D M K+ ++ N++I G+V
Sbjct: 32 TRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVK 91
Query: 579 HGFWHAALDLFDQM 592
G +A DLFD M
Sbjct: 92 TGDVSSARDLFDAM 105
Score = 36.6 bits (83), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 20/145 (13%)
Query: 29 LDFLCGNGRLNEAITVLDSIATQGAKVRRNTYINLLQAC-IDSNSIHLARKLHAFLNLVT 87
LD L NGR EA ++D + + ++ + ++L AC I N R ++
Sbjct: 596 LDLLGRNGRFAEAEKLMDEMPFEPDEI---MWSSVLNACRIHKNQSLAERAAEKLFSMEK 652
Query: 88 EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNL-----YTWSAM---IGAYSR----- 134
D + ++YA G + R+V + MRER + Y+W + I +S
Sbjct: 653 LRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTH 712
Query: 135 ---DQRWREVVELFFLMVQDGLFPD 156
D+ R++ EL + ++G PD
Sbjct: 713 PNGDEIVRKINELTAEIEREGYKPD 737
>sp|Q9FFG8|PP417_ARATH Pentatricopeptide repeat-containing protein At5g44230
OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1
Length = 657
Score = 323 bits (829), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 197/616 (31%), Positives = 323/616 (52%), Gaps = 56/616 (9%)
Query: 264 LIRSYNQLGQCDVAMEMVKRMESLGITP----DVFTWTCMISGFAQNGRTSQALDLFKEM 319
LIR+ +LG V M+ R I P + F WT +I G+A G+ +A+ ++ M
Sbjct: 87 LIRTLTKLG---VPMDPYARRV---IEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCM 140
Query: 320 SFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEEL 379
+ P T ++ + AC +K L +G + H+ ++ V VGN++I+MY KCE +
Sbjct: 141 RKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESI 200
Query: 380 EAAERVFDMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGY 439
+ A +VFD + ++DV SW +IA Y + G A ELF ES +++ W +++G+
Sbjct: 201 DCARKVFDEMPERDVISWTELIAAYARVGNMECAAELF----ESLPTKDMVAWTAMVTGF 256
Query: 440 IQNGNEDEAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPN 499
QN EA++ F RM K+ ++ + + I+ QLG A + Q S + P+
Sbjct: 257 AQNAKPQEALEYFDRMEKSG-IRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPS 315
Query: 500 CVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIVYSRTIFD 559
++ ++LID Y+K GN+ + +F
Sbjct: 316 DHVVIG---------------------------------SALIDMYSKCGNVEEAVNVFM 342
Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQM-KSFGLKPNRGTFLSIILAHSLAGMVD 618
M++K++ T++S+I G HG AL LF M +KPN TF+ ++A S +G+VD
Sbjct: 343 SMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVD 402
Query: 619 LGKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTA 678
G++VF S+ + + + P +HY+ M+DL GR+G+L+EA+E I+ M +EP +W ALL A
Sbjct: 403 QGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGA 462
Query: 679 CRIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALKVRKLERENTRRNSF 738
CRIH N ++A +A E LF+LEP + L+ +YA G L+VRKL +E + +
Sbjct: 463 CRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTP 522
Query: 739 GQCWIEVKN-LVYTFVTGGWSESYSDLLYSWLQNVPENVTARSSHSGLC-----IEEEEK 792
W+ KN ++ F G + S+ + L+ + E +T L + + K
Sbjct: 523 AVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAK 582
Query: 793 EEISGIHSEKLALAFALIGSSQAPHTIRIVKNIRMCVHCHETAKYVSMMHHCEIFLADSK 852
I H+EKLALAF+L+ +++ TI I+KN+RMC+ CH+ + S + I + D+
Sbjct: 583 RLILIQHTEKLALAFSLLTTNR-DSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNM 641
Query: 853 CLHHFKNGQCSCGDYW 868
HHF++G CSCGD+W
Sbjct: 642 RFHHFRSGDCSCGDFW 657
Score = 166 bits (420), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 217/462 (46%), Gaps = 49/462 (10%)
Query: 36 GRLNEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHA-FLNLVTEIDVFVK 94
GR + I+ Q ++ ++ I+ L CI+ N I +++H L + ++
Sbjct: 29 GRTSNNSGTFSEISNQ-KELLVSSLISKLDDCINLNQI---KQIHGHVLRKGLDQSCYIL 84
Query: 95 TKLLSVYAKCGCLDD--AREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDG 152
TKL+ K G D AR V E ++ RN + W+A+I Y+ + ++ E + ++ M ++
Sbjct: 85 TKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEE 144
Query: 153 LFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWAR 212
+ P F F +L+ACG D G+ H+ +L C V N+++ +YVKC + AR
Sbjct: 145 ITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCAR 204
Query: 213 RFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIRSYNQLG 272
+ F+ M E+D ++W +I+ Y ++G + A LF+ + +++ V + ++ + Q
Sbjct: 205 KVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDM----VAWTAMVTGFAQNA 260
Query: 273 QCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTIT 332
+ A+E RME GI D VT+
Sbjct: 261 KPQEALEYFDRMEKSGIRAD-----------------------------------EVTVA 285
Query: 333 SAISACTDLKALAMGMEIHSLAVKMGF--TDDVLVGNSLINMYSKCEELEAAERVFDMIK 390
ISAC L A +A K G+ +D V++G++LI+MYSKC +E A VF +
Sbjct: 286 GYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMN 345
Query: 391 DKDVYSWNSMIAGYCQAGYCGKAYELFIKM-QESDVPPNVITWNVLISGYIQNGNEDEAV 449
+K+V++++SMI G G +A LF M ++++ PN +T+ + +G D+
Sbjct: 346 NKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGR 405
Query: 450 DLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKM 491
+F M + V+ + ++ + G+ AL + + M
Sbjct: 406 QVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTM 447
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 167/342 (48%), Gaps = 20/342 (5%)
Query: 58 NTYINLLQACIDSNSIHLARKLHAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDM 117
NT I++ C SI ARK+ + + E DV T+L++ YA+ G ++ A E+FE +
Sbjct: 188 NTMIDMYVKC---ESIDCARKV---FDEMPERDVISWTELIAAYARVGNMECAAELFESL 241
Query: 118 RERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGK 177
+++ W+AM+ ++++ + +E +E F M + G+ D+ + AC G +
Sbjct: 242 PTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYAD 301
Query: 178 LMHSLVIKLGMSCVRRV--RNSVLAVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQ 235
+ K G S V ++++ +Y KCG + A F SM+ K+ ++SMI G
Sbjct: 302 RAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLAT 361
Query: 236 IGENDEAHRLFDKMCRE-EIKLGVVTFNILIRSYNQLGQCDVAMEMVKRM-ESLGITPDV 293
G EA LF M + EIK VTF + + + G D ++ M ++ G+ P
Sbjct: 362 HGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTR 421
Query: 294 FTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEIHSL 353
+TCM+ + GR +AL+L K MS V P+G + + AC + EI +
Sbjct: 422 DHYTCMVDLLGRTGRLQEALELIKTMS---VEPHGGVWGALLGACR----IHNNPEIAEI 474
Query: 354 AVKMGFT-DDVLVGNSLI--NMYSKCEELEAAERVFDMIKDK 392
A + F + ++GN ++ N+Y+ + RV +IK+K
Sbjct: 475 AAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEK 516
Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 119/236 (50%), Gaps = 11/236 (4%)
Query: 502 TILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLIDTYAKSGNIV--YSRTIFD 559
+++S L C L N++K+IHG VLR+ L+ S ++ LI T K G + Y+R + +
Sbjct: 51 SLISKLDDCINL---NQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 560 GMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAGMVDL 619
+ ++ W ++I GY + G + A+ ++ M+ + P TF +++ A ++L
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 620 GKKVFCSITECYQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEALLTAC 679
G++ F + T + + + MID+Y + ++ A + ++MP E D W L+ A
Sbjct: 168 GRQ-FHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMP-ERDVISWTELIAAY 225
Query: 680 RIHGNIDLAVLAIERLFDLEPGDVLIQRLILQIYAICGKPEDALK-VRKLERENTR 734
GN++ A E L D++ ++ +A KP++AL+ ++E+ R
Sbjct: 226 ARVGNMECAAELFE---SLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIR 278
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 97/217 (44%), Gaps = 15/217 (6%)
Query: 35 NGRLNEAITVLDSIATQGAKVRRNTYINLLQACID-------SNSIHLARKLHAFLNLVT 87
N + EA+ D + G + T + AC ++ +A+K
Sbjct: 259 NAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKS----GYSP 314
Query: 88 EIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFL 147
V + + L+ +Y+KCG +++A VF M +N++T+S+MI + R +E + LF
Sbjct: 315 SDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHY 374
Query: 148 MV-QDGLFPDDFLFPKILQACGNCGDFEAGK-LMHSLVIKLGMSCVRRVRNSVLAVYVKC 205
MV Q + P+ F L AC + G + G+ + S+ G+ R ++ + +
Sbjct: 375 MVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRT 434
Query: 206 GKLIWARRFFESMD-EKDGVAWNSMISGYFQIGENDE 241
G+L A ++M E G W +++ G +I N E
Sbjct: 435 GRLQEALELIKTMSVEPHGGVWGALL-GACRIHNNPE 470
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 323 bits (827), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 199/587 (33%), Positives = 300/587 (51%), Gaps = 53/587 (9%)
Query: 291 PDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMPNGVTITSAISACTDLKALAMGMEI 350
PD F W MI GF+ + ++L L++ M N T S + AC++L A +I
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 351 HSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVFDMIKDKDVYSWNSMIAGYCQAGYC 410
H+ K+G+ +DV NSLIN Y+ + A +FD I + D SWNS+I GY +AG
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 411 GKAYELFIKMQESDVPPNVITWNVLISGYIQNGNEDEAVDLFQRMGKNDKVKRNTASWNS 470
A LF KM E N I+W +ISGY+Q EA+ LF M
Sbjct: 198 DIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEM--------------- 238
Query: 471 LIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSVLPACAYLVASNKVKEIHGCVLRRS 530
Q+S P+ V++ + L ACA L A + K IH + +
Sbjct: 239 ---------------------QNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTR 277
Query: 531 LESSLPVMNSLIDTYAKSGNIVYSRTIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFD 590
+ + LID YAK G + + +F + K + W +LI GY HG A+ F
Sbjct: 278 IRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFM 337
Query: 591 QMKSFGLKPNRGTFLSIILAHSLAGMVDLGKKVFCSITECYQIIPMIEHYSAMIDLYGRS 650
+M+ G+KPN TF +++ A S G+V+ GK +F S+ Y + P IEHY ++DL GR+
Sbjct: 338 EMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRA 397
Query: 651 GKLEEAMEFIEDMPIEPDSSIWEALLTACRIHGNIDLAVLAIERLFDLEP--GDVLIQRL 708
G L+EA FI++MP++P++ IW ALL ACRIH NI+L E L ++P G + +
Sbjct: 398 GLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHK- 456
Query: 709 ILQIYAICGKPEDALKVRKLERENTRRNSFGQCWIEVKNLVYTFVTGGWSESYSDLLYS- 767
I+A+ K + A + R+L +E G I ++ + F+ G S + + S
Sbjct: 457 -ANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSK 515
Query: 768 W---LQNVPENVTARSSHSGL--CIEEEEKEEISGIHSEKLALAFALIGSSQAPHT-IRI 821
W + + EN L ++++E+E I HSEKLA+ + LI + P T IRI
Sbjct: 516 WRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTK--PGTIIRI 573
Query: 822 VKNIRMCVHCHETAKYVSMMHHCEIFLADSKCLHHFKNGQCSCGDYW 868
+KN+R+C CH+ K +S ++ +I + D HHF++G+CSCGDYW
Sbjct: 574 MKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 196/424 (46%), Gaps = 45/424 (10%)
Query: 90 DVFVKTKLLSV---YAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFF 146
D + TK LS L A+ VF+ + + W+ MI +S + L+
Sbjct: 45 DSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQ 104
Query: 147 LMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVLAVYVKCG 206
M+ + + FP +L+AC N FE +H+ + KLG
Sbjct: 105 RMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGY------------------ 146
Query: 207 KLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVVTFNILIR 266
E D A NS+I+ Y G AH LFD++ + V++N +I+
Sbjct: 147 -------------ENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPD----DVSWNSVIK 189
Query: 267 SYNQLGQCDVAMEMVKRMESLGITPDVFTWTCMISGFAQNGRTSQALDLFKEMSFVGVMP 326
Y + G+ D+A+ + ++M + +WT MISG+ Q +AL LF EM V P
Sbjct: 190 GYVKAGKMDIALTLFRKMAE----KNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEP 245
Query: 327 NGVTITSAISACTDLKALAMGMEIHSLAVKMGFTDDVLVGNSLINMYSKCEELEAAERVF 386
+ V++ +A+SAC L AL G IHS K D ++G LI+MY+KC E+E A VF
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 387 DMIKDKDVYSWNSMIAGYCQAGYCGKAYELFIKMQESDVPPNVITWNVLISGYIQNGNED 446
IK K V +W ++I+GY G+ +A F++MQ+ + PNVIT+ +++ G +
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVE 365
Query: 447 EAVDLFQRMGKNDKVKRNTASWNSLIAGYQQLGQKNNALGVFRKMQSSCFYPNCVTILSV 506
E +F M ++ +K + ++ + G + A R +Q PN V ++
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAK---RFIQEMPLKPNAVIWGAL 422
Query: 507 LPAC 510
L AC
Sbjct: 423 LKAC 426
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 127/277 (45%), Gaps = 4/277 (1%)
Query: 80 HAFLNLVTEIDVFVKTKLLSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWR 139
H + + E D ++ Y K G +D A +F M E+N +W+ MI Y + +
Sbjct: 170 HLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNK 229
Query: 140 EVVELFFLMVQDGLFPDDFLFPKILQACGNCGDFEAGKLMHSLVIKLGMSCVRRVRNSVL 199
E ++LF M + PD+ L AC G E GK +HS + K + + ++
Sbjct: 230 EALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLI 289
Query: 200 AVYVKCGKLIWARRFFESMDEKDGVAWNSMISGYFQIGENDEAHRLFDKMCREEIKLGVV 259
+Y KCG++ A F+++ +K AW ++ISGY G EA F +M + IK V+
Sbjct: 290 DMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVI 349
Query: 260 TFNILIRSYNQLGQCDVAMEMVKRME-SLGITPDVFTWTCMISGFAQNGRTSQALDLFKE 318
TF ++ + + G + + ME + P + + C++ + G +A +E
Sbjct: 350 TFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQE 409
Query: 319 MSFVGVMPNGVTITSAISACTDLKALAMGMEIHSLAV 355
M + PN V + + AC K + +G EI + +
Sbjct: 410 MP---LKPNAVIWGALLKACRIHKNIELGEEIGEILI 443
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 97/197 (49%), Gaps = 3/197 (1%)
Query: 39 NEAITVLDSIATQGAKVRRNTYINLLQACIDSNSIHLARKLHAFLNLV-TEIDVFVKTKL 97
EA+ + + + + N L AC ++ + +H++LN +D + L
Sbjct: 229 KEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVL 288
Query: 98 LSVYAKCGCLDDAREVFEDMRERNLYTWSAMIGAYSRDQRWREVVELFFLMVQDGLFPDD 157
+ +YAKCG +++A EVF++++++++ W+A+I Y+ RE + F M + G+ P+
Sbjct: 289 IDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNV 348
Query: 158 FLFPKILQACGNCGDFEAGKLM-HSLVIKLGMSCVRRVRNSVLAVYVKCGKLIWARRFFE 216
F +L AC G E GKL+ +S+ + ++ + + G L A+RF +
Sbjct: 349 ITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQ 408
Query: 217 SMDEK-DGVAWNSMISG 232
M K + V W +++
Sbjct: 409 EMPLKPNAVIWGALLKA 425
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 86/201 (42%), Gaps = 10/201 (4%)
Query: 499 NCVTILSVLPACAYLVASNKVKEIHGCVLRRSLESSLPVMNSLID---TYAKSGNIVYSR 555
N +S L C+ ++K+IH +L+ L + + + S + Y++
Sbjct: 13 NLYETMSCLQRCS---KQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQ 69
Query: 556 TIFDGMSSKDIITWNSLICGYVLHGFWHAALDLFDQMKSFGLKPNRGTFLSIILAHSLAG 615
+FDG D WN +I G+ +L L+ +M N TF S++ A S
Sbjct: 70 IVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLS 129
Query: 616 MVDLGKKVFCSITEC-YQIIPMIEHYSAMIDLYGRSGKLEEAMEFIEDMPIEPDSSIWEA 674
+ ++ IT+ Y+ + +++I+ Y +G + A + +P EPD W +
Sbjct: 130 AFEETTQIHAQITKLGYE--NDVYAVNSLINSYAVTGNFKLAHLLFDRIP-EPDDVSWNS 186
Query: 675 LLTACRIHGNIDLAVLAIERL 695
++ G +D+A+ ++
Sbjct: 187 VIKGYVKAGKMDIALTLFRKM 207
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 318,722,114
Number of Sequences: 539616
Number of extensions: 13399815
Number of successful extensions: 54771
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 39080
Number of HSP's gapped (non-prelim): 3241
length of query: 868
length of database: 191,569,459
effective HSP length: 126
effective length of query: 742
effective length of database: 123,577,843
effective search space: 91694759506
effective search space used: 91694759506
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 66 (30.0 bits)