Query 047993
Match_columns 210
No_of_seqs 120 out of 1091
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 05:14:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047993.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047993hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 2.4E-47 5.1E-52 331.0 17.9 194 3-208 154-350 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 3.4E-47 7.4E-52 325.9 18.4 190 3-204 125-315 (315)
3 cd01847 Triacylglycerol_lipase 100.0 1.9E-43 4.1E-48 298.3 17.9 178 3-203 99-280 (281)
4 PRK15381 pathogenicity island 100.0 1E-39 2.2E-44 285.9 18.6 166 6-203 235-400 (408)
5 cd01846 fatty_acyltransferase_ 100.0 1E-38 2.3E-43 267.2 18.1 173 4-202 97-269 (270)
6 COG3240 Phospholipase/lecithin 100.0 2.7E-30 5.8E-35 219.8 12.5 174 5-204 160-333 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.9 6.8E-22 1.5E-26 159.9 9.9 147 4-200 80-234 (234)
8 cd01834 SGNH_hydrolase_like_2 99.0 8.3E-09 1.8E-13 81.1 13.1 129 7-203 62-191 (191)
9 cd00229 SGNH_hydrolase SGNH_hy 98.9 2E-08 4.3E-13 76.6 10.6 123 4-202 63-186 (187)
10 cd01839 SGNH_arylesterase_like 98.9 1.2E-08 2.7E-13 82.0 9.1 120 6-203 79-204 (208)
11 cd01829 SGNH_hydrolase_peri2 S 98.9 3.8E-08 8.2E-13 78.4 11.7 138 6-203 59-197 (200)
12 cd01836 FeeA_FeeB_like SGNH_hy 98.8 3.3E-08 7.1E-13 78.2 10.7 121 6-203 67-188 (191)
13 cd01833 XynB_like SGNH_hydrola 98.8 2.5E-08 5.4E-13 76.5 9.6 116 6-203 40-156 (157)
14 cd01823 SEST_like SEST_like. A 98.8 9.7E-08 2.1E-12 79.2 13.4 160 7-202 81-258 (259)
15 cd01841 NnaC_like NnaC (CMP-Ne 98.8 5.4E-08 1.2E-12 75.9 10.0 120 7-202 52-172 (174)
16 cd04506 SGNH_hydrolase_YpmR_li 98.7 3.4E-07 7.4E-12 73.2 13.7 132 6-202 68-203 (204)
17 cd01830 XynE_like SGNH_hydrola 98.7 1.4E-07 3E-12 75.8 10.6 56 8-68 76-131 (204)
18 cd01828 sialate_O-acetylestera 98.7 1.8E-07 3.9E-12 72.6 10.7 118 6-203 48-167 (169)
19 cd01838 Isoamyl_acetate_hydrol 98.7 1.7E-07 3.7E-12 74.0 9.8 133 6-202 63-197 (199)
20 cd04501 SGNH_hydrolase_like_4 98.7 2.7E-07 5.8E-12 72.5 10.8 124 6-203 59-182 (183)
21 PF13472 Lipase_GDSL_2: GDSL-l 98.7 3.4E-07 7.4E-12 70.1 10.5 93 6-130 61-153 (179)
22 cd01824 Phospholipase_B_like P 98.6 3.9E-07 8.4E-12 77.5 11.5 153 8-205 121-284 (288)
23 cd01832 SGNH_hydrolase_like_1 98.6 3.4E-07 7.4E-12 71.9 10.1 117 6-202 67-184 (185)
24 cd01821 Rhamnogalacturan_acety 98.6 2.5E-07 5.4E-12 73.8 9.3 133 6-203 65-197 (198)
25 cd01820 PAF_acetylesterase_lik 98.5 1.1E-06 2.5E-11 71.1 11.1 120 6-203 89-209 (214)
26 cd01822 Lysophospholipase_L1_l 98.4 2.8E-06 6.1E-11 66.0 10.3 47 6-65 64-110 (177)
27 cd04502 SGNH_hydrolase_like_7 98.4 3.7E-06 8E-11 65.4 10.6 119 6-202 50-169 (171)
28 cd01826 acyloxyacyl_hydrolase_ 98.4 3.4E-06 7.3E-11 71.6 11.0 55 8-67 124-180 (305)
29 cd01827 sialate_O-acetylestera 98.4 2.6E-06 5.5E-11 67.1 9.5 119 6-203 67-186 (188)
30 cd01825 SGNH_hydrolase_peri1 S 98.3 2.1E-06 4.6E-11 67.4 8.0 128 6-203 56-184 (189)
31 cd01835 SGNH_hydrolase_like_3 98.3 2.8E-06 6E-11 67.3 8.1 123 6-202 69-191 (193)
32 cd01844 SGNH_hydrolase_like_6 98.3 7.3E-06 1.6E-10 64.2 10.4 118 6-202 57-175 (177)
33 PRK10528 multifunctional acyl- 98.2 7.2E-06 1.6E-10 65.4 9.1 44 6-61 71-114 (191)
34 cd01840 SGNH_hydrolase_yrhL_li 98.2 1.6E-05 3.4E-10 60.9 9.8 22 181-202 127-148 (150)
35 cd01831 Endoglucanase_E_like E 98.1 1.9E-05 4.1E-10 61.4 8.5 22 182-203 146-167 (169)
36 KOG3035 Isoamyl acetate-hydrol 97.5 0.00034 7.3E-09 56.5 6.7 137 6-202 68-206 (245)
37 COG2755 TesA Lysophospholipase 97.3 0.0024 5.2E-08 51.3 9.5 23 183-205 187-209 (216)
38 COG2845 Uncharacterized protei 96.9 0.0048 1.1E-07 52.7 8.1 136 6-202 177-315 (354)
39 KOG3670 Phospholipase [Lipid t 95.5 0.24 5.3E-06 43.6 11.0 56 8-67 186-242 (397)
40 PF14606 Lipase_GDSL_3: GDSL-l 94.8 0.078 1.7E-06 41.9 5.7 116 6-202 59-175 (178)
41 cd01842 SGNH_hydrolase_like_5 93.1 2.1 4.7E-05 33.8 10.6 19 184-202 162-180 (183)
42 COG3240 Phospholipase/lecithin 91.0 0.21 4.5E-06 43.7 3.1 68 6-75 98-165 (370)
43 PLN02757 sirohydrochlorine fer 88.4 1.4 3.1E-05 33.9 5.6 63 44-135 60-125 (154)
44 PRK13384 delta-aminolevulinic 87.4 2.8 6E-05 36.1 7.1 69 34-126 53-121 (322)
45 cd00384 ALAD_PBGS Porphobilino 87.0 3.2 6.9E-05 35.6 7.3 69 34-126 43-111 (314)
46 cd04824 eu_ALAD_PBGS_cysteine_ 87.0 2.9 6.4E-05 35.9 7.1 71 34-126 43-114 (320)
47 PRK09283 delta-aminolevulinic 86.3 3.3 7.2E-05 35.7 7.1 69 34-126 51-119 (323)
48 cd04823 ALAD_PBGS_aspartate_ri 86.3 3.2 6.9E-05 35.7 7.0 70 34-126 46-116 (320)
49 PF00490 ALAD: Delta-aminolevu 82.7 5 0.00011 34.6 6.6 66 39-126 54-119 (324)
50 cd03416 CbiX_SirB_N Sirohydroc 81.0 4.6 0.0001 28.2 5.1 55 42-125 44-98 (101)
51 PF08885 GSCFA: GSCFA family; 80.8 13 0.00028 31.0 8.4 77 36-130 146-222 (251)
52 PF01903 CbiX: CbiX; InterPro 78.2 1.6 3.5E-05 30.7 2.0 54 44-126 39-92 (105)
53 PF02633 Creatininase: Creatin 77.3 12 0.00026 30.6 7.2 60 41-133 85-144 (237)
54 COG0113 HemB Delta-aminolevuli 73.4 17 0.00036 31.3 7.0 71 34-126 53-123 (330)
55 cd03414 CbiX_SirB_C Sirohydroc 73.4 17 0.00037 26.0 6.4 52 42-124 45-96 (117)
56 KOG2794 Delta-aminolevulinic a 68.6 19 0.00042 30.4 6.3 69 36-126 63-131 (340)
57 PF13839 PC-Esterase: GDSL/SGN 65.3 39 0.00085 27.3 7.7 110 6-132 100-219 (263)
58 cd03412 CbiK_N Anaerobic cobal 64.2 32 0.00069 25.3 6.3 52 41-124 55-106 (127)
59 PRK13717 conjugal transfer pro 59.0 24 0.00052 26.3 4.6 63 45-116 32-95 (128)
60 PF02896 PEP-utilizers_C: PEP- 51.8 39 0.00084 28.9 5.5 14 10-24 199-212 (293)
61 PF08029 HisG_C: HisG, C-termi 50.8 14 0.00031 24.8 2.2 21 44-64 52-72 (75)
62 TIGR02744 TrbI_Ftype type-F co 50.7 40 0.00087 24.6 4.6 26 91-116 57-82 (112)
63 COG1209 RfbA dTDP-glucose pyro 50.2 65 0.0014 27.4 6.4 33 104-144 114-146 (286)
64 TIGR03455 HisG_C-term ATP phos 47.6 26 0.00057 24.9 3.2 23 42-64 74-96 (100)
65 COG1015 DeoB Phosphopentomutas 43.3 67 0.0015 28.5 5.6 69 42-126 266-334 (397)
66 COG3581 Uncharacterized protei 42.2 38 0.00083 30.2 4.0 47 50-127 327-373 (420)
67 PF06908 DUF1273: Protein of u 41.0 1.1E+02 0.0024 24.0 6.2 29 35-63 22-50 (177)
68 TIGR01417 PTS_I_fam phosphoeno 40.5 71 0.0015 30.0 5.8 14 9-23 445-458 (565)
69 PF12872 OST-HTH: OST-HTH/LOTU 40.0 56 0.0012 21.0 3.8 25 120-144 23-49 (74)
70 COG1402 Uncharacterized protei 39.3 44 0.00096 27.9 3.8 25 39-63 87-111 (250)
71 KOG4079 Putative mitochondrial 38.3 15 0.00032 27.8 0.8 17 53-69 42-58 (169)
72 TIGR01091 upp uracil phosphori 36.2 1.2E+02 0.0027 24.2 6.0 25 40-64 134-158 (207)
73 cd03413 CbiK_C Anaerobic cobal 34.6 49 0.0011 23.5 3.0 19 44-62 44-62 (103)
74 cd03415 CbiX_CbiC Archaeal sir 33.4 50 0.0011 24.4 3.0 20 43-62 45-64 (125)
75 PRK13660 hypothetical protein; 33.2 2.5E+02 0.0053 22.3 7.5 27 37-63 24-50 (182)
76 PRK11177 phosphoenolpyruvate-p 32.9 1.1E+02 0.0023 28.9 5.7 15 9-24 446-460 (575)
77 PF06812 ImpA-rel_N: ImpA-rela 32.8 16 0.00036 23.3 0.3 8 182-189 53-60 (62)
78 PF09677 TrbI_Ftype: Type-F co 32.6 75 0.0016 23.0 3.7 25 92-116 57-81 (111)
79 PF04914 DltD_C: DltD C-termin 31.3 41 0.00089 25.1 2.2 24 178-201 101-124 (130)
80 TIGR00175 mito_nad_idh isocitr 31.2 83 0.0018 27.4 4.4 40 102-141 179-218 (333)
81 PRK00129 upp uracil phosphorib 30.9 1.7E+02 0.0036 23.5 5.9 25 40-64 136-160 (209)
82 TIGR02089 TTC tartrate dehydro 30.3 87 0.0019 27.5 4.4 38 104-141 199-236 (352)
83 PRK03437 3-isopropylmalate deh 30.2 84 0.0018 27.6 4.3 38 104-141 196-233 (344)
84 PF08331 DUF1730: Domain of un 29.5 1.7E+02 0.0038 19.4 6.2 13 53-65 8-20 (78)
85 PLN00123 isocitrate dehydrogen 28.6 1.2E+02 0.0026 26.8 5.0 39 103-141 203-241 (360)
86 cd03411 Ferrochelatase_N Ferro 28.5 69 0.0015 24.4 3.2 22 44-65 101-122 (159)
87 COG3605 PtsP Signal transducti 28.4 36 0.00078 32.1 1.7 17 7-24 618-634 (756)
88 PF07394 DUF1501: Protein of u 27.9 1.4E+02 0.0029 26.3 5.3 62 8-75 247-309 (392)
89 PRK00772 3-isopropylmalate deh 27.7 1.3E+02 0.0028 26.5 5.0 39 103-141 199-237 (358)
90 PRK08997 isocitrate dehydrogen 27.3 1.4E+02 0.003 26.1 5.1 38 104-141 183-220 (334)
91 PF14681 UPRTase: Uracil phosp 27.2 1.9E+02 0.004 23.2 5.6 47 42-126 135-183 (207)
92 TIGR00169 leuB 3-isopropylmala 27.1 1.4E+02 0.0031 26.2 5.1 39 103-141 196-234 (349)
93 PLN00118 isocitrate dehydrogen 26.8 1.2E+02 0.0025 27.0 4.6 41 101-141 217-257 (372)
94 COG4053 Uncharacterized protei 26.4 3.4E+02 0.0074 21.9 6.6 28 38-65 22-49 (244)
95 COG4531 ZnuA ABC-type Zn2+ tra 26.2 1.9E+02 0.0041 24.7 5.4 47 92-144 180-230 (318)
96 PRK14025 multifunctional 3-iso 26.2 1.4E+02 0.003 26.0 4.9 40 102-141 178-217 (330)
97 cd00419 Ferrochelatase_C Ferro 26.0 78 0.0017 23.6 3.0 19 44-62 79-97 (135)
98 KOG0923 mRNA splicing factor A 25.8 33 0.00072 32.9 1.0 37 11-58 632-668 (902)
99 PRK06520 5-methyltetrahydropte 25.5 1.1E+02 0.0024 26.9 4.3 37 32-69 160-196 (368)
100 COG0276 HemH Protoheme ferro-l 25.3 2.4E+02 0.0051 24.5 6.1 23 44-66 104-126 (320)
101 COG1182 AcpD Acyl carrier prot 25.0 1E+02 0.0022 25.0 3.5 27 102-128 19-45 (202)
102 PRK00923 sirohydrochlorin coba 24.6 88 0.0019 22.6 3.0 21 42-62 46-66 (126)
103 KOG0907 Thioredoxin [Posttrans 24.0 1.1E+02 0.0023 21.9 3.2 30 104-134 38-67 (106)
104 PRK06233 hypothetical protein; 23.5 1.3E+02 0.0028 26.5 4.3 35 33-68 162-196 (372)
105 cd03409 Chelatase_Class_II Cla 23.4 99 0.0022 21.0 3.0 19 44-62 47-65 (101)
106 PF00180 Iso_dh: Isocitrate/is 23.4 1.4E+02 0.0029 26.2 4.4 38 104-141 195-233 (348)
107 cd01823 SEST_like SEST_like. A 23.2 1.5E+02 0.0033 23.9 4.5 37 94-130 122-158 (259)
108 cd03311 CIMS_C_terminal_like C 22.7 3.4E+02 0.0074 23.1 6.7 37 32-69 145-181 (332)
109 PRK08194 tartrate dehydrogenas 22.6 1.3E+02 0.0029 26.4 4.1 38 104-141 196-233 (352)
110 COG0648 Nfo Endonuclease IV [D 22.2 4.2E+02 0.0091 22.6 6.9 53 35-106 80-132 (280)
111 cd04506 SGNH_hydrolase_YpmR_li 22.2 2.2E+02 0.0049 21.9 5.1 33 95-127 98-130 (204)
112 cd02957 Phd_like Phosducin (Ph 22.1 2E+02 0.0044 20.1 4.5 26 104-129 41-66 (113)
113 PLN02541 uracil phosphoribosyl 22.0 1.7E+02 0.0036 24.4 4.4 50 41-128 170-221 (244)
114 PF11965 DUF3479: Domain of un 21.8 1.7E+02 0.0036 22.9 4.1 31 99-129 10-41 (164)
115 PF11100 TrbE: Conjugal transf 21.8 78 0.0017 20.5 1.9 26 176-201 17-42 (66)
116 PF07555 NAGidase: beta-N-acet 21.7 1.1E+02 0.0025 26.3 3.5 25 38-62 87-111 (306)
117 PF14242 DUF4342: Domain of un 21.4 1.2E+02 0.0026 20.8 2.9 25 39-63 13-38 (84)
118 PRK10128 2-keto-3-deoxy-L-rham 21.1 3E+02 0.0066 23.1 5.9 17 7-24 168-184 (267)
119 cd02989 Phd_like_TxnDC9 Phosdu 21.0 1.4E+02 0.0029 21.3 3.3 27 104-130 39-65 (113)
120 PRK05481 lipoyl synthase; Prov 20.6 5.2E+02 0.011 21.8 8.3 23 41-63 82-104 (289)
121 PF05141 DIT1_PvcA: Pyoverdine 20.5 1.8E+02 0.0039 24.7 4.4 70 36-129 40-109 (278)
122 TIGR01418 PEP_synth phosphoeno 20.5 2.5E+02 0.0055 27.5 5.9 13 10-23 686-698 (782)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=2.4e-47 Score=330.97 Aligned_cols=194 Identities=23% Similarity=0.529 Sum_probs=167.2
Q ss_pred cccCCCeeEEcccccchhhhhhhc--C-CchhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccC
Q 047993 3 QKLKSSLFIVGEIGENDYKYALFQ--G-KTVEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRT 79 (210)
Q Consensus 3 ~~~~~sl~~i~~iG~ND~~~~~~~--~-~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~ 79 (210)
++++++||+| |||+|||+..++. . ....++.++++.+++.+.+.|++||++|||||+|+|+||+||+|..+....
T Consensus 154 ~~~~~sL~~i-~iG~NDy~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~- 231 (351)
T PLN03156 154 EIISEALYLI-SIGTNDFLENYYTFPGRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNL- 231 (351)
T ss_pred HHHhcCeEEE-EecchhHHHHhhccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcC-
Confidence 5678999999 9999999854321 1 122346789999999999999999999999999999999999998765311
Q ss_pred CCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccC
Q 047993 80 NDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYD 159 (210)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~ 159 (210)
.+..+|.+.+|.+++.||++|++++++|++++||++|+++|+|+++.++++||++|||++ ++++|||. |.|+
T Consensus 232 -----~~~~~C~~~~n~~~~~~N~~L~~~l~~L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~--~~~aCCg~-g~~~ 303 (351)
T PLN03156 232 -----MGGSECVEEYNDVALEFNGKLEKLVTKLNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEV--TSVACCAT-GMFE 303 (351)
T ss_pred -----CCCCCchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEehHHHHHHHHhCccccCccc--CCccccCC-CCCC
Confidence 123579999999999999999999999999999999999999999999999999999999 99999995 5543
Q ss_pred CCccccCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhccCCCC
Q 047993 160 FNLTKMCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRDIFPKL 208 (210)
Q Consensus 160 ~~~~~~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~~~~~~ 208 (210)
....|+......|++|++|+|||++|||+++|+++|+.++++..+++
T Consensus 304 --~~~~C~~~~~~~C~~p~~yvfWD~~HPTe~a~~~iA~~~~~~l~~~~ 350 (351)
T PLN03156 304 --MGYLCNRNNPFTCSDADKYVFWDSFHPTEKTNQIIANHVVKTLLSKF 350 (351)
T ss_pred --CccccCCCCCCccCCccceEEecCCCchHHHHHHHHHHHHHHHHHhh
Confidence 45689855446899999999999999999999999999999876654
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=3.4e-47 Score=325.90 Aligned_cols=190 Identities=37% Similarity=0.625 Sum_probs=165.8
Q ss_pred cccCCCeeEEcccccchhhhhhhcCCc-hhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCC
Q 047993 3 QKLKSSLFIVGEIGENDYKYALFQGKT-VEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTND 81 (210)
Q Consensus 3 ~~~~~sl~~i~~iG~ND~~~~~~~~~~-~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~ 81 (210)
.+++++||+| |||+|||+..+..+.+ ..+..++++.+++++.++|++|+++|||||+|+|+||+||+|.++....
T Consensus 125 ~~~~~sL~~i-~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~--- 200 (315)
T cd01837 125 DILSKSLFLI-SIGSNDYLNNYFANPTRQYEVEAYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFG--- 200 (315)
T ss_pred HHHhCCEEEE-EecccccHHHHhcCccccCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcC---
Confidence 4578999999 9999999875533322 2456789999999999999999999999999999999999999886431
Q ss_pred cccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCC
Q 047993 82 SAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFN 161 (210)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~ 161 (210)
.+..+|.+.++++++.||++|+++|++|++++|+++|+++|+|+++.++++||++|||++ ++++||+.+ .++
T Consensus 201 ---~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~y~~~~~i~~np~~yGf~~--~~~aCc~~g-~~~-- 272 (315)
T cd01837 201 ---GDGGGCLEELNELARLFNAKLKKLLAELRRELPGAKFVYADIYNALLDLIQNPAKYGFEN--TLKACCGTG-GPE-- 272 (315)
T ss_pred ---CCCCCcCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEehhHHHHHHHhChhhcCCcC--CCcCccCCC-CCC--
Confidence 123579999999999999999999999999999999999999999999999999999999 999999963 332
Q ss_pred ccccCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhcc
Q 047993 162 LTKMCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRDI 204 (210)
Q Consensus 162 ~~~~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~~ 204 (210)
....|+.....+|.+|++|+|||++|||+++|+++|+.+++|.
T Consensus 273 ~~~~c~~~~~~~C~~p~~y~fwD~~HpT~~~~~~ia~~~~~g~ 315 (315)
T cd01837 273 GGLLCNPCGSTVCPDPSKYVFWDGVHPTEAANRIIADALLSGP 315 (315)
T ss_pred cccccCCCCCCcCCCccceEEeCCCChHHHHHHHHHHHHhcCC
Confidence 2357865556799999999999999999999999999999874
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=1.9e-43 Score=298.25 Aligned_cols=178 Identities=21% Similarity=0.205 Sum_probs=152.7
Q ss_pred cccCCCeeEEcccccchhhhhhhcCCc----hhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCccccccc
Q 047993 3 QKLKSSLFIVGEIGENDYKYALFQGKT----VEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFR 78 (210)
Q Consensus 3 ~~~~~sl~~i~~iG~ND~~~~~~~~~~----~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~ 78 (210)
.+++++||+| |||+|||+..+....+ ..++.++++.+++.+..+|++|+++|||+|+|+|+||+||+|.++...
T Consensus 99 ~~~~~sL~~i-~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~- 176 (281)
T cd01847 99 GFDPNALYTV-WIGGNDLIAALAALTTATTTQAAAVAAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP- 176 (281)
T ss_pred CCCCCeEEEE-ecChhHHHHHHhhccccccchhhHHHHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc-
Confidence 3578999999 9999999865432211 234678999999999999999999999999999999999999987531
Q ss_pred CCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCccccccccccccc
Q 047993 79 TNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDY 158 (210)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~ 158 (210)
..|.+.++.+++.||++|+++|++|+++ +|+++|+|+++.+|++||++|||++ ++++||+.++.+
T Consensus 177 ---------~~~~~~~n~~~~~~N~~L~~~l~~l~~~----~i~~~D~~~~~~~i~~nP~~yGf~~--~~~~CC~~~~~~ 241 (281)
T cd01847 177 ---------AAAAALASALSQTYNQTLQSGLNQLGAN----NIIYVDTATLLKEVVANPAAYGFTN--TTTPACTSTSAA 241 (281)
T ss_pred ---------chhHHHHHHHHHHHHHHHHHHHHhccCC----eEEEEEHHHHHHHHHhChHhcCccC--CCccccCCCCcc
Confidence 3578899999999999999999988754 8999999999999999999999999 999999864332
Q ss_pred CCCccccCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhc
Q 047993 159 DFNLTKMCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRD 203 (210)
Q Consensus 159 ~~~~~~~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~ 203 (210)
.|+......|.+|++|+|||++|||+++|+++|+.+++.
T Consensus 242 ------~~~~~~~~~c~~~~~y~fwD~~HpTe~~~~~ia~~~~~~ 280 (281)
T cd01847 242 ------GSGAATLVTAAAQSTYLFADDVHPTPAGHKLIAQYALSR 280 (281)
T ss_pred ------ccccccccCCCCccceeeccCCCCCHHHHHHHHHHHHHh
Confidence 244334468999999999999999999999999998863
No 4
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=1e-39 Score=285.95 Aligned_cols=166 Identities=25% Similarity=0.286 Sum_probs=143.0
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAY 85 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~ 85 (210)
+++||+| |+|+|||+.. ..++++.+++.+..+|++||++|||||+|+|+||+||+|..+..
T Consensus 235 ~~aL~lV-~iG~NDy~~~---------~~~~v~~vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~--------- 295 (408)
T PRK15381 235 HQDLAIF-LLGANDYMTL---------HKDNVIMVVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHS--------- 295 (408)
T ss_pred CCcEEEE-EeccchHHHh---------HHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhcc---------
Confidence 5899999 9999999832 13467889999999999999999999999999999999987632
Q ss_pred cCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCcccc
Q 047993 86 DQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTKM 165 (210)
Q Consensus 86 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~~ 165 (210)
...+.+|.+++.||++|+++|++|++++||++|+++|+|+++.++++||++|||++ ++. ||+. |..+ ....
T Consensus 296 ---~~~~~~N~~a~~fN~~L~~~L~~L~~~~pg~~ivy~D~y~~~~~ii~nP~~yGF~~--~~~-cCg~-G~~~--~~~~ 366 (408)
T PRK15381 296 ---DEKRKLKDESIAHNALLKTNVEELKEKYPQHKICYYETADAFKVIMEAASNIGYDT--ENP-YTHH-GYVH--VPGA 366 (408)
T ss_pred ---CchHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHHHHhCHHhcCCCc--ccc-ccCC-CccC--Cccc
Confidence 12478999999999999999999999999999999999999999999999999999 766 9986 4432 2345
Q ss_pred CCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhc
Q 047993 166 CGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRD 203 (210)
Q Consensus 166 c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~ 203 (210)
|. +...+|. +|+|||.+|||+++|+++|+.+.+=
T Consensus 367 C~-p~~~~C~---~YvFWD~vHPTe~ah~iiA~~~~~~ 400 (408)
T PRK15381 367 KD-PQLDICP---QYVFNDLVHPTQEVHHCFAIMLESF 400 (408)
T ss_pred cC-cccCCCC---ceEecCCCCChHHHHHHHHHHHHHH
Confidence 75 4456784 9999999999999999999988653
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=1e-38 Score=267.23 Aligned_cols=173 Identities=27% Similarity=0.303 Sum_probs=151.7
Q ss_pred ccCCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcc
Q 047993 4 KLKSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSA 83 (210)
Q Consensus 4 ~~~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~ 83 (210)
..+++||+| |+|+||++..+.. .......++++++++.++|++|+++|+|+|+|+++||++|+|..+....
T Consensus 97 ~~~~~l~~i-~~G~ND~~~~~~~---~~~~~~~~~~~~~~~~~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~----- 167 (270)
T cd01846 97 LPPDTLVAI-WIGANDLLNALDL---PQNPDTLVTRAVDNLFQALQRLYAAGARNFLVLNLPDLGLTPAFQAQGD----- 167 (270)
T ss_pred CCCCcEEEE-Eeccchhhhhccc---cccccccHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccCCc-----
Confidence 457899999 9999999975422 1234578899999999999999999999999999999999999986431
Q ss_pred cccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCcc
Q 047993 84 AYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLT 163 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~ 163 (210)
...+.++.+++.||++|++++++|++++|+++|.++|+|+.+.++++||++|||++ ++++||+. +
T Consensus 168 -----~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~~~~~p~~yGf~~--~~~~C~~~-~------- 232 (270)
T cd01846 168 -----AVAARATALTAAYNAKLAEKLAELKAQHPGVNILLFDTNALFNDILDNPAAYGFTN--VTDPCLDY-V------- 232 (270)
T ss_pred -----ccHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEhHHHHHHHHhCHHhcCCCc--CcchhcCC-C-------
Confidence 11268999999999999999999999999999999999999999999999999999 99999984 1
Q ss_pred ccCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHh
Q 047993 164 KMCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIR 202 (210)
Q Consensus 164 ~~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~ 202 (210)
.|. +....|.+|++|+|||++|||+++|+++|+.+++
T Consensus 233 -~~~-~~~~~c~~~~~y~fwD~~HpT~~~~~~iA~~~~~ 269 (270)
T cd01846 233 -YSY-SPREACANPDKYLFWDEVHPTTAVHQLIAEEVAA 269 (270)
T ss_pred -ccc-cccCCCCCccceEEecCCCccHHHHHHHHHHHHh
Confidence 153 4467999999999999999999999999999876
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=99.97 E-value=2.7e-30 Score=219.80 Aligned_cols=174 Identities=21% Similarity=0.198 Sum_probs=137.6
Q ss_pred cCCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCccc
Q 047993 5 LKSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAA 84 (210)
Q Consensus 5 ~~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~ 84 (210)
-.+.|+.+ |.|+|||+..-..+ .............++...|++|.++|||+|+|+++||++.+|....-.
T Consensus 160 ~p~~l~~~-~ggand~~~~~~~~--a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~------- 229 (370)
T COG3240 160 DPSALYFL-WGGANDYLALPMLK--AAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYG------- 229 (370)
T ss_pred CHHHHHHH-hhcchhhhcccccc--hhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeecccccccccccccc-------
Confidence 34567889 99999998652111 112223344446789999999999999999999999999999987532
Q ss_pred ccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCccc
Q 047993 85 YDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTK 164 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~ 164 (210)
.-...+.+++..||..|++.|++++ .+|+++|++.+|++|+.+|++|||.| ++..||... . -+ .
T Consensus 230 ----~~~~~a~~~t~~~Na~L~~~L~~~g-----~nIi~iD~~~llk~im~nPa~fGlan--t~~~~c~~~-~--~~--~ 293 (370)
T COG3240 230 ----TEAIQASQATIAFNASLTSQLEQLG-----GNIIRIDTYTLLKEIMTNPAEFGLAN--TTAPACDAT-V--SN--P 293 (370)
T ss_pred ----chHHHHHHHHHHHHHHHHHHHHHhc-----CcEEEeEhHHHHHHHHhCHHhcCccc--CCCcccCcc-c--CC--c
Confidence 1123788999999999999998774 68999999999999999999999999 999998741 2 11 2
Q ss_pred cCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhcc
Q 047993 165 MCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRDI 204 (210)
Q Consensus 165 ~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~~ 204 (210)
.|+...-..|..|++|+|||.+|||+++|++||++++.-.
T Consensus 294 ~~~a~~p~~~~~~~~ylFaD~vHPTt~~H~liAeyila~l 333 (370)
T COG3240 294 ACSASLPALCAAPQKYLFADSVHPTTAVHHLIAEYILARL 333 (370)
T ss_pred ccccccccccCCccceeeecccCCchHHHHHHHHHHHHHH
Confidence 5654333445567889999999999999999999998765
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.87 E-value=6.8e-22 Score=159.94 Aligned_cols=147 Identities=29% Similarity=0.521 Sum_probs=118.0
Q ss_pred ccCCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCc-----EEEEeCCCCCcccCccccccc
Q 047993 4 KLKSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAV-----RVVVPGNFPVGCFPIYLTQFR 78 (210)
Q Consensus 4 ~~~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar-----~~~v~nlp~lg~~P~~~~~~~ 78 (210)
..+.+|++| |+|+||++... ........++.+++.+.+.|++|+..|+| +++++++||+++.|.......
T Consensus 80 ~~~~~lv~i-~~G~ND~~~~~----~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (234)
T PF00657_consen 80 FYDPDLVVI-WIGTNDYFNNR----DSSDNNTSVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSSNNK 154 (234)
T ss_dssp HHTTSEEEE-E-SHHHHSSCC----SCSTTHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHT
T ss_pred cCCcceEEE-ecccCcchhhc----ccchhhhhHhhHhhhhhhhhhHHhccCCccccccccccccccccccccccccccc
Confidence 356799999 99999997511 11233566788899999999999999999 999999999998887765432
Q ss_pred CCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCC-CceEEEeehhHHHHHH--HhCcCCCCcccCcccccccccc
Q 047993 79 TNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHP-NVAIIYGDYYTAFMWI--LGHVRTLEFDNGSMQKACCGIG 155 (210)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~-~~~i~~~D~~~~~~~i--~~~p~~yGf~~~~~~~~C~~~~ 155 (210)
....|.+.++..++.||++|++.+.++++.++ +.++.++|+++.+.++ ..+|+.
T Consensus 155 -------~~~~~~~~~~~~~~~~n~~l~~~~~~l~~~~~~~~~v~~~D~~~~~~~~~~~~~~~~---------------- 211 (234)
T PF00657_consen 155 -------DSASCIERLNAIVAAFNSALREVAAQLRKDYPKGANVPYFDIYSIFSDMYGIQNPEN---------------- 211 (234)
T ss_dssp -------TTCTTHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTEEEEEHHHHHHHHHHHHHGGH----------------
T ss_pred -------cccccchhhHHHHHHHHHHHHHHhhhcccccccCCceEEEEHHHHHHHhhhccCccc----------------
Confidence 23579999999999999999999999887665 7899999999999887 444322
Q ss_pred cccCCCccccCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHH
Q 047993 156 GDYDFNLTKMCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWL 200 (210)
Q Consensus 156 g~~~~~~~~~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~ 200 (210)
++|+|||++|||+++|++||++|
T Consensus 212 ----------------------~~~~~~D~~Hpt~~g~~~iA~~i 234 (234)
T PF00657_consen 212 ----------------------DKYMFWDGVHPTEKGHKIIAEYI 234 (234)
T ss_dssp ----------------------HHCBBSSSSSB-HHHHHHHHHHH
T ss_pred ----------------------ceeccCCCcCCCHHHHHHHHcCC
Confidence 47799999999999999999976
No 8
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=99.02 E-value=8.3e-09 Score=81.09 Aligned_cols=129 Identities=13% Similarity=0.118 Sum_probs=83.2
Q ss_pred CCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHH-HcCCcEEEEeCCCCCcccCcccccccCCCcccc
Q 047993 7 SSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVI-DFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAY 85 (210)
Q Consensus 7 ~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~-~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~ 85 (210)
-.+++| ++|+||+...... ....++..+++...|+.|. .....+|++.+.|+....+...
T Consensus 62 ~d~v~l-~~G~ND~~~~~~~-------~~~~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~----------- 122 (191)
T cd01834 62 PDVVSI-MFGINDSFRGFDD-------PVGLEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPL----------- 122 (191)
T ss_pred CCEEEE-EeecchHhhcccc-------cccHHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCCC-----------
Confidence 378999 9999999854210 1123455566777777775 3445568887766543221100
Q ss_pred cCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCcccc
Q 047993 86 DQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTKM 165 (210)
Q Consensus 86 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~~ 165 (210)
.-....+.....||+.|++..++ + ++.++|++..+.+....+
T Consensus 123 ---~~~~~~~~~~~~~n~~l~~~a~~----~---~~~~iD~~~~~~~~~~~~---------------------------- 164 (191)
T cd01834 123 ---PDGAEYNANLAAYADAVRELAAE----N---GVAFVDLFTPMKEAFQKA---------------------------- 164 (191)
T ss_pred ---CChHHHHHHHHHHHHHHHHHHHH----c---CCeEEecHHHHHHHHHhC----------------------------
Confidence 01245666778888888876442 2 477999998876532221
Q ss_pred CCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhc
Q 047993 166 CGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRD 203 (210)
Q Consensus 166 c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~ 203 (210)
+..++++|++||++++|++||+.+.++
T Consensus 165 -----------~~~~~~~D~~Hpn~~G~~~~a~~~~~~ 191 (191)
T cd01834 165 -----------GEAVLTVDGVHPNEAGHRALARLWLEA 191 (191)
T ss_pred -----------CCccccCCCCCCCHHHHHHHHHHHHhC
Confidence 123356899999999999999999763
No 9
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.90 E-value=2e-08 Score=76.55 Aligned_cols=123 Identities=19% Similarity=0.118 Sum_probs=78.8
Q ss_pred ccCCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHH-cCCcEEEEeCCCCCcccCcccccccCCCc
Q 047993 4 KLKSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVID-FGAVRVVVPGNFPVGCFPIYLTQFRTNDS 82 (210)
Q Consensus 4 ~~~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~-~Gar~~~v~nlp~lg~~P~~~~~~~~~~~ 82 (210)
..+..++++ .+|+||+.... ..+ .....+.+...++.|.+ ....+|++++.|+....|.
T Consensus 63 ~~~~d~vil-~~G~ND~~~~~--~~~-------~~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~---------- 122 (187)
T cd00229 63 KDKPDLVII-ELGTNDLGRGG--DTS-------IDEFKANLEELLDALRERAPGAKVILITPPPPPPREG---------- 122 (187)
T ss_pred cCCCCEEEE-Eeccccccccc--ccC-------HHHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch----------
Confidence 345688999 99999997532 011 22333444455555554 5667788888888765543
Q ss_pred ccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCc
Q 047993 83 AAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNL 162 (210)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~ 162 (210)
........+|+.+++..++.... ..+.++|++..+...
T Consensus 123 ----------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~----------------------------- 160 (187)
T cd00229 123 ----------LLGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE----------------------------- 160 (187)
T ss_pred ----------hhHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC-----------------------------
Confidence 12234566788877766544321 346677776443110
Q ss_pred cccCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHh
Q 047993 163 TKMCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIR 202 (210)
Q Consensus 163 ~~~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~ 202 (210)
+..++++|++|||+++|+++|+.+++
T Consensus 161 --------------~~~~~~~Dg~H~~~~G~~~~a~~i~~ 186 (187)
T cd00229 161 --------------DKSLYSPDGIHPNPAGHKLIAEALAS 186 (187)
T ss_pred --------------ccccccCCCCCCchhhHHHHHHHHhc
Confidence 34567799999999999999999875
No 10
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.87 E-value=1.2e-08 Score=81.98 Aligned_cols=120 Identities=18% Similarity=0.141 Sum_probs=74.2
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHc------CCcEEEEeCCCCCcccCcccccccC
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDF------GAVRVVVPGNFPVGCFPIYLTQFRT 79 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~------Gar~~~v~nlp~lg~~P~~~~~~~~ 79 (210)
.-++++| ++|+||+...+ +.+ .+...+++.+.|+.+.+. +..++++.+.||+...+...
T Consensus 79 ~pd~vii-~lGtND~~~~~--~~~-------~~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~~----- 143 (208)
T cd01839 79 PLDLVII-MLGTNDLKSYF--NLS-------AAEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGSL----- 143 (208)
T ss_pred CCCEEEE-ecccccccccc--CCC-------HHHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCccccch-----
Confidence 4489999 99999987432 111 123334444555555554 46778999888872211111
Q ss_pred CCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccC
Q 047993 80 NDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYD 159 (210)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~ 159 (210)
..+....+.....||+.+++..++. ++.++|++..+ ..
T Consensus 144 --------~~~~~~~~~~~~~~~~~~~~~a~~~-------~~~~iD~~~~~------------~~--------------- 181 (208)
T cd01839 144 --------AGKFAGAEEKSKGLADAYRALAEEL-------GCHFFDAGSVG------------ST--------------- 181 (208)
T ss_pred --------hhhhccHHHHHHHHHHHHHHHHHHh-------CCCEEcHHHHh------------cc---------------
Confidence 1122334667778888888765432 35677765432 00
Q ss_pred CCccccCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhc
Q 047993 160 FNLTKMCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRD 203 (210)
Q Consensus 160 ~~~~~~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~ 203 (210)
+..|++|||+++|++||+.+++-
T Consensus 182 ---------------------~~~DGvH~~~~G~~~~a~~l~~~ 204 (208)
T cd01839 182 ---------------------SPVDGVHLDADQHAALGQALASV 204 (208)
T ss_pred ---------------------CCCCccCcCHHHHHHHHHHHHHH
Confidence 12499999999999999998753
No 11
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.87 E-value=3.8e-08 Score=78.38 Aligned_cols=138 Identities=17% Similarity=0.156 Sum_probs=80.9
Q ss_pred CCCeeEEcccccchhhhhhhcCC-chhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCccc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGK-TVEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAA 84 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~-~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~ 84 (210)
.-+++++ .+|+||+......+. .......+.+...+++...++.+.+.|++ +++++.||+.-
T Consensus 59 ~pd~vii-~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~--------------- 121 (200)
T cd01829 59 KPDVVVV-FLGANDRQDIRDGDGYLKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS--------------- 121 (200)
T ss_pred CCCEEEE-EecCCCCccccCCCceeecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC---------------
Confidence 3467888 899999975321110 00011233445556666777777666766 77778776531
Q ss_pred ccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCccc
Q 047993 85 YDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTK 164 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~ 164 (210)
...+.....+|+.+++..+ +. .+.++|++..|. . ...|+...+
T Consensus 122 -------~~~~~~~~~~~~~~~~~a~----~~---~~~~id~~~~~~------------~---~~~~~~~~~-------- 164 (200)
T cd01829 122 -------PKLSADMVYLNSLYREEVA----KA---GGEFVDVWDGFV------------D---ENGRFTYSG-------- 164 (200)
T ss_pred -------hhHhHHHHHHHHHHHHHHH----Hc---CCEEEEhhHhhc------------C---CCCCeeeec--------
Confidence 0123345667877776543 22 367999987751 1 122332100
Q ss_pred cCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhc
Q 047993 165 MCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRD 203 (210)
Q Consensus 165 ~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~ 203 (210)
. .....+..++..|++|||+++|++||+.+.+.
T Consensus 165 ~------~~~~~~~~~~~~DgvH~~~~G~~~~a~~i~~~ 197 (200)
T cd01829 165 T------DVNGKKVRLRTNDGIHFTAAGGRKLAFYVEKL 197 (200)
T ss_pred c------CCCCcEEEeecCCCceECHHHHHHHHHHHHHH
Confidence 0 01122334556799999999999999998764
No 12
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.85 E-value=3.3e-08 Score=78.25 Aligned_cols=121 Identities=20% Similarity=0.207 Sum_probs=78.4
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHH-cCCcEEEEeCCCCCcccCcccccccCCCccc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVID-FGAVRVVVPGNFPVGCFPIYLTQFRTNDSAA 84 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~-~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~ 84 (210)
.-++++| .+|+||+.... + .++..+++.+.++++.+ ....+|++.++||++..|....
T Consensus 67 ~pd~Vii-~~G~ND~~~~~----~-------~~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~--------- 125 (191)
T cd01836 67 RFDVAVI-SIGVNDVTHLT----S-------IARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ--------- 125 (191)
T ss_pred CCCEEEE-EecccCcCCCC----C-------HHHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH---------
Confidence 4578899 99999986421 1 33455666667777766 3556899999999876553211
Q ss_pred ccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCccc
Q 047993 85 YDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTK 164 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~ 164 (210)
.....++...+.+|+.+++..+ +++ .+.++|++..+.
T Consensus 126 ----~~~~~~~~~~~~~n~~~~~~a~----~~~--~~~~id~~~~~~--------------------------------- 162 (191)
T cd01836 126 ----PLRWLLGRRARLLNRALERLAS----EAP--RVTLLPATGPLF--------------------------------- 162 (191)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHh----cCC--CeEEEecCCccc---------------------------------
Confidence 1123345566777877776554 333 456777653321
Q ss_pred cCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhc
Q 047993 165 MCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRD 203 (210)
Q Consensus 165 ~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~ 203 (210)
.+++.-|++||++++|+++|+.+.+.
T Consensus 163 -------------~~~~~~DglHpn~~Gy~~~a~~l~~~ 188 (191)
T cd01836 163 -------------PALFASDGFHPSAAGYAVWAEALAPA 188 (191)
T ss_pred -------------hhhccCCCCCCChHHHHHHHHHHHHH
Confidence 11223499999999999999998763
No 13
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.84 E-value=2.5e-08 Score=76.49 Aligned_cols=116 Identities=16% Similarity=0.215 Sum_probs=79.1
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCcccCcccccccCCCccc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGA-VRVVVPGNFPVGCFPIYLTQFRTNDSAA 84 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Ga-r~~~v~nlp~lg~~P~~~~~~~~~~~~~ 84 (210)
.-+++++ .+|+||+.... + +++..+++.+.|+++.+.+- -+|++..+||....+
T Consensus 40 ~pd~vvi-~~G~ND~~~~~----~-------~~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~------------- 94 (157)
T cd01833 40 KPDVVLL-HLGTNDLVLNR----D-------PDTAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS------------- 94 (157)
T ss_pred CCCEEEE-eccCcccccCC----C-------HHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc-------------
Confidence 4578899 99999997531 1 33455677777777776643 236666665532111
Q ss_pred ccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCccc
Q 047993 85 YDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTK 164 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~ 164 (210)
.+.....||+.+++.+++.... +..+.++|+++.+..
T Consensus 95 ---------~~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~~-------------------------------- 131 (157)
T cd01833 95 ---------GNARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYTT-------------------------------- 131 (157)
T ss_pred ---------hhHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCCC--------------------------------
Confidence 1456789999999998876542 556888887633210
Q ss_pred cCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhc
Q 047993 165 MCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRD 203 (210)
Q Consensus 165 ~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~ 203 (210)
+++.+|++||++++|+.||+.+++.
T Consensus 132 --------------~~~~~Dg~Hpn~~Gy~~~a~~~~~~ 156 (157)
T cd01833 132 --------------ADDLYDGLHPNDQGYKKMADAWYEA 156 (157)
T ss_pred --------------cccccCCCCCchHHHHHHHHHHHhh
Confidence 2355799999999999999999864
No 14
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.83 E-value=9.7e-08 Score=79.24 Aligned_cols=160 Identities=18% Similarity=0.134 Sum_probs=87.7
Q ss_pred CCeeEEcccccchhhhhhhc-----C-----------CchhhHhhhHHHHHHHHHHHHHHHHHc-CCcEEEEeCCCCCcc
Q 047993 7 SSLFIVGEIGENDYKYALFQ-----G-----------KTVEEVKTLVPEVVQAIKDAVTRVIDF-GAVRVVVPGNFPVGC 69 (210)
Q Consensus 7 ~sl~~i~~iG~ND~~~~~~~-----~-----------~~~~~~~~~v~~~v~~~~~~v~~L~~~-Gar~~~v~nlp~lg~ 69 (210)
-.+++| .+|+||+...... . ..........+...+++...|++|.+. .--+|++++.|++--
T Consensus 81 ~dlV~i-~iG~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~~ 159 (259)
T cd01823 81 TDLVTI-TIGGNDLGFADVVKACILTGGGSSLAQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLFP 159 (259)
T ss_pred CCEEEE-EECccccchHHHHHHHhhccCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEeccccccc
Confidence 367999 9999998643210 0 001122344556667777777877764 345699999887531
Q ss_pred c-CcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCccc
Q 047993 70 F-PIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQ 148 (210)
Q Consensus 70 ~-P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~ 148 (210)
. ....... ....... .....+..++....+|+.+++..++. .+.++.++|++..| .. .
T Consensus 160 ~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~ln~~i~~~a~~~----~~~~v~fvD~~~~f------------~~---~ 218 (259)
T cd01823 160 PDGGDCDKS-CSPGTPL-TPADRPELNQLVDKLNALIRRAAADA----GDYKVRFVDTDAPF------------AG---H 218 (259)
T ss_pred CCCCCcccc-cccCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHh----CCceEEEEECCCCc------------CC---C
Confidence 1 0000000 0000000 01123456677778888777765433 23568899998654 21 2
Q ss_pred ccccccccccCCCccccCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHh
Q 047993 149 KACCGIGGDYDFNLTKMCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIR 202 (210)
Q Consensus 149 ~~C~~~~g~~~~~~~~~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~ 202 (210)
..|... .. .... .+....+.-|++||+.++|+.||+.+.+
T Consensus 219 ~~~~~~--~~-------~~~~-----~~~~~~~~~d~~HPn~~G~~~~A~~i~~ 258 (259)
T cd01823 219 RACSPD--PW-------SRSV-----LDLLPTRQGKPFHPNAAGHRAIADLIVD 258 (259)
T ss_pred ccccCC--Cc-------cccc-----cCCCCCCCccCCCCCHHHHHHHHHHHhh
Confidence 333321 10 0000 0122334569999999999999999875
No 15
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=98.79 E-value=5.4e-08 Score=75.85 Aligned_cols=120 Identities=17% Similarity=0.207 Sum_probs=78.3
Q ss_pred CCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHc-CCcEEEEeCCCCCcccCcccccccCCCcccc
Q 047993 7 SSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDF-GAVRVVVPGNFPVGCFPIYLTQFRTNDSAAY 85 (210)
Q Consensus 7 ~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~-Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~ 85 (210)
-.+++| ++|+||+.... + .+...+++...++++.+. ...+++++++||....+.
T Consensus 52 pd~v~i-~~G~ND~~~~~----~-------~~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~------------- 106 (174)
T cd01841 52 PSKVFL-FLGTNDIGKEV----S-------SNQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE------------- 106 (174)
T ss_pred CCEEEE-EeccccCCCCC----C-------HHHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc-------------
Confidence 467888 99999986421 1 334556677777777765 356788888887643221
Q ss_pred cCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCcccc
Q 047993 86 DQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTKM 165 (210)
Q Consensus 86 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~~ 165 (210)
+....+.....||+.+++..++. .+.++|+++.+.. .. +.
T Consensus 107 ----~~~~~~~~~~~~n~~l~~~a~~~-------~~~~id~~~~~~~----------~~-----------~~-------- 146 (174)
T cd01841 107 ----IKTRSNTRIQRLNDAIKELAPEL-------GVTFIDLNDVLVD----------EF-----------GN-------- 146 (174)
T ss_pred ----cccCCHHHHHHHHHHHHHHHHHC-------CCEEEEcHHHHcC----------CC-----------CC--------
Confidence 01123456788999988765432 3779999877521 00 00
Q ss_pred CCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHh
Q 047993 166 CGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIR 202 (210)
Q Consensus 166 c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~ 202 (210)
..+.+..|++||++++|++||+.+.+
T Consensus 147 -----------~~~~~~~DglH~n~~Gy~~~a~~l~~ 172 (174)
T cd01841 147 -----------LKKEYTTDGLHFNPKGYQKLLEILEE 172 (174)
T ss_pred -----------ccccccCCCcccCHHHHHHHHHHHHh
Confidence 00124569999999999999999864
No 16
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=98.75 E-value=3.4e-07 Score=73.20 Aligned_cols=132 Identities=17% Similarity=0.234 Sum_probs=82.5
Q ss_pred CCCeeEEcccccchhhhhhhcCC---chhhHhhhHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCcccCcccccccCCC
Q 047993 6 KSSLFIVGEIGENDYKYALFQGK---TVEEVKTLVPEVVQAIKDAVTRVIDFGA-VRVVVPGNFPVGCFPIYLTQFRTND 81 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~---~~~~~~~~v~~~v~~~~~~v~~L~~~Ga-r~~~v~nlp~lg~~P~~~~~~~~~~ 81 (210)
.-.+++| .+|+||+........ ........++....++.+.|+++.+.+. .+|+++++++ |.....
T Consensus 68 ~~d~V~i-~~G~ND~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~----p~~~~~----- 137 (204)
T cd04506 68 KADVITI-TIGGNDLMQVLEKNFLSLDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYN----PFYVYF----- 137 (204)
T ss_pred cCCEEEE-EecchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCC----cccccc-----
Confidence 4578899 999999986432111 1122233455667788888888888754 3677777531 211110
Q ss_pred cccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCC
Q 047993 82 SAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFN 161 (210)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~ 161 (210)
.-...++..+..||+.+++..+ ++ .++.++|+++.+.. . .
T Consensus 138 -------~~~~~~~~~~~~~n~~~~~~a~----~~--~~v~~vd~~~~~~~-----------~---~------------- 177 (204)
T cd04506 138 -------PNITEINDIVNDWNEASQKLAS----QY--KNAYFVPIFDLFSD-----------G---Q------------- 177 (204)
T ss_pred -------chHHHHHHHHHHHHHHHHHHHH----hC--CCeEEEehHHhhcC-----------C---c-------------
Confidence 0113456788889988777653 22 24789999876521 0 0
Q ss_pred ccccCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHh
Q 047993 162 LTKMCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIR 202 (210)
Q Consensus 162 ~~~~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~ 202 (210)
+..++..|++||++++|++||+.+++
T Consensus 178 ---------------~~~~~~~Dg~Hpn~~G~~~~a~~l~~ 203 (204)
T cd04506 178 ---------------NKYLLTSDHFHPNDKGYQLIADRVFK 203 (204)
T ss_pred ---------------ccccccccCcCCCHHHHHHHHHHHHh
Confidence 01224469999999999999999875
No 17
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.72 E-value=1.4e-07 Score=75.83 Aligned_cols=56 Identities=16% Similarity=0.147 Sum_probs=37.4
Q ss_pred CeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCc
Q 047993 8 SLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVG 68 (210)
Q Consensus 8 sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg 68 (210)
.+++| .+|+||+..... ... .....++...+++...++++.+.|+ ++++.++||..
T Consensus 76 ~~vii-~~G~ND~~~~~~-~~~--~~~~~~~~~~~~l~~ii~~~~~~~~-~vil~t~~P~~ 131 (204)
T cd01830 76 RTVII-LEGVNDIGASGT-DFA--AAPVTAEELIAGYRQLIRRAHARGI-KVIGATITPFE 131 (204)
T ss_pred CEEEE-eccccccccccc-ccc--cCCCCHHHHHHHHHHHHHHHHHCCC-eEEEecCCCCC
Confidence 57889 999999874321 100 1112345667778888888888887 57778888754
No 18
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.71 E-value=1.8e-07 Score=72.61 Aligned_cols=118 Identities=22% Similarity=0.323 Sum_probs=75.7
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHH--cCCcEEEEeCCCCCcccCcccccccCCCcc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVID--FGAVRVVVPGNFPVGCFPIYLTQFRTNDSA 83 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~--~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~ 83 (210)
.-.++++ .+|.||..... + .++..+++.+.|+.+.+ .+ .+|++.++||.+ +.
T Consensus 48 ~pd~vvl-~~G~ND~~~~~----~-------~~~~~~~l~~li~~~~~~~~~-~~vi~~~~~p~~--~~----------- 101 (169)
T cd01828 48 QPKAIFI-MIGINDLAQGT----S-------DEDIVANYRTILEKLRKHFPN-IKIVVQSILPVG--EL----------- 101 (169)
T ss_pred CCCEEEE-EeeccCCCCCC----C-------HHHHHHHHHHHHHHHHHHCCC-CeEEEEecCCcC--cc-----------
Confidence 4478899 99999986321 1 23445566666666666 44 458888888765 10
Q ss_pred cccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCcc
Q 047993 84 AYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLT 163 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~ 163 (210)
....+.....+|+.+++..+ + . ++.++|+++.+.+ .. +
T Consensus 102 -------~~~~~~~~~~~n~~l~~~a~----~-~--~~~~id~~~~~~~----------~~-----------~------- 139 (169)
T cd01828 102 -------KSIPNEQIEELNRQLAQLAQ----Q-E--GVTFLDLWAVFTN----------AD-----------G------- 139 (169)
T ss_pred -------CcCCHHHHHHHHHHHHHHHH----H-C--CCEEEechhhhcC----------CC-----------C-------
Confidence 01123456888998887654 2 2 4568898865411 00 0
Q ss_pred ccCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhc
Q 047993 164 KMCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRD 203 (210)
Q Consensus 164 ~~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~ 203 (210)
+..+++..|++|||+++|+++|+.+..-
T Consensus 140 ------------~~~~~~~~DgiHpn~~G~~~~a~~i~~~ 167 (169)
T cd01828 140 ------------DLKNEFTTDGLHLNAKGYAVWAAALQPY 167 (169)
T ss_pred ------------CcchhhccCccccCHHHHHHHHHHHHHh
Confidence 0123455799999999999999998753
No 19
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.68 E-value=1.7e-07 Score=74.03 Aligned_cols=133 Identities=16% Similarity=0.097 Sum_probs=78.3
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHH--cCCcEEEEeCCCCCcccCcccccccCCCcc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVID--FGAVRVVVPGNFPVGCFPIYLTQFRTNDSA 83 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~--~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~ 83 (210)
+-.+++| ++|+||....... . ....+...+++...|+++.+ .|+ ++++++.||++..........
T Consensus 63 ~pd~vii-~~G~ND~~~~~~~-~-----~~~~~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~~----- 129 (199)
T cd01838 63 QPDLVTI-FFGANDAALPGQP-Q-----HVPLDEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLED----- 129 (199)
T ss_pred CceEEEE-EecCccccCCCCC-C-----cccHHHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhcc-----
Confidence 5678999 9999999753210 0 01123344555556666655 454 578888877653221100000
Q ss_pred cccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCcc
Q 047993 84 AYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLT 163 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~ 163 (210)
........++..+.||+.+++..++ + .+.++|+++.+.. + . +.
T Consensus 130 ---~~~~~~~~~~~~~~~~~~~~~~a~~----~---~~~~iD~~~~~~~---~-------~-----------~~------ 172 (199)
T cd01838 130 ---GGSQPGRTNELLKQYAEACVEVAEE----L---GVPVIDLWTAMQE---E-------A-----------GW------ 172 (199)
T ss_pred ---ccCCccccHHHHHHHHHHHHHHHHH----h---CCcEEEHHHHHHh---c-------c-----------Cc------
Confidence 0011234566778888887765442 2 3678999877642 0 1 00
Q ss_pred ccCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHh
Q 047993 164 KMCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIR 202 (210)
Q Consensus 164 ~~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~ 202 (210)
.+.++.|++||+++||+++|+.+.+
T Consensus 173 --------------~~~~~~Dg~Hpn~~G~~~~a~~l~~ 197 (199)
T cd01838 173 --------------LESLLTDGLHFSSKGYELLFEEIVK 197 (199)
T ss_pred --------------hhhhcCCCCCcCHhHHHHHHHHHHh
Confidence 0113459999999999999999875
No 20
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.68 E-value=2.7e-07 Score=72.49 Aligned_cols=124 Identities=19% Similarity=0.234 Sum_probs=77.0
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAY 85 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~ 85 (210)
.-+++++ .+|.||..... + ..+..+.+...|+.+.+.|++ ++++..||....+...
T Consensus 59 ~~d~v~i-~~G~ND~~~~~----~-------~~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~----------- 114 (183)
T cd04501 59 KPAVVII-MGGTNDIIVNT----S-------LEMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP----------- 114 (183)
T ss_pred CCCEEEE-EeccCccccCC----C-------HHHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch-----------
Confidence 3478899 99999996421 1 223455666667777778876 5555666654332211
Q ss_pred cCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCcccc
Q 047993 86 DQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTKM 165 (210)
Q Consensus 86 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~~ 165 (210)
.....+.....||+.+++..++ .++.++|+++.+.+... ..
T Consensus 115 ----~~~~~~~~~~~~n~~~~~~a~~-------~~v~~vd~~~~~~~~~~-------~~--------------------- 155 (183)
T cd04501 115 ----QWLRPANKLKSLNRWLKDYARE-------NGLLFLDFYSPLLDERN-------VG--------------------- 155 (183)
T ss_pred ----hhcchHHHHHHHHHHHHHHHHH-------cCCCEEechhhhhcccc-------cc---------------------
Confidence 1122345667888888776543 14779999876532100 00
Q ss_pred CCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhc
Q 047993 166 CGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRD 203 (210)
Q Consensus 166 c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~ 203 (210)
..+.+.-|++||++++|+++|+.+.+.
T Consensus 156 -----------~~~~~~~DgvHp~~~Gy~~~a~~i~~~ 182 (183)
T cd04501 156 -----------LKPGLLTDGLHPSREGYRVMAPLAEKA 182 (183)
T ss_pred -----------ccccccCCCCCCCHHHHHHHHHHHHHh
Confidence 112244699999999999999998753
No 21
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=98.65 E-value=3.4e-07 Score=70.14 Aligned_cols=93 Identities=20% Similarity=0.240 Sum_probs=59.7
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAY 85 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~ 85 (210)
.-.+++| .+|+||.... - ......++..+.+...|+.+...| +++++++||....+...
T Consensus 61 ~~d~vvi-~~G~ND~~~~-~------~~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~~----------- 119 (179)
T PF13472_consen 61 KPDLVVI-SFGTNDVLNG-D------ENDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRDP----------- 119 (179)
T ss_dssp TCSEEEE-E--HHHHCTC-T------TCHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTTT-----------
T ss_pred CCCEEEE-Eccccccccc-c------cccccHHHHHHHHHHHHHhhcccC--cEEEecCCCcccccccc-----------
Confidence 3468899 9999999863 1 112345566777888888888888 88888888755332211
Q ss_pred cCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHH
Q 047993 86 DQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAF 130 (210)
Q Consensus 86 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~ 130 (210)
+..........+|+.+++..+ ++ .+.++|+...+
T Consensus 120 ----~~~~~~~~~~~~~~~~~~~a~----~~---~~~~id~~~~~ 153 (179)
T PF13472_consen 120 ----KQDYLNRRIDRYNQAIRELAK----KY---GVPFIDLFDAF 153 (179)
T ss_dssp ----HTTCHHHHHHHHHHHHHHHHH----HC---TEEEEEHHHHH
T ss_pred ----cchhhhhhHHHHHHHHHHHHH----Hc---CCEEEECHHHH
Confidence 123345667778887776543 33 57899998775
No 22
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=98.64 E-value=3.9e-07 Score=77.48 Aligned_cols=153 Identities=14% Similarity=0.060 Sum_probs=83.5
Q ss_pred CeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCc-EEEEeCCCCCcccCcccccccCCCccccc
Q 047993 8 SLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAV-RVVVPGNFPVGCFPIYLTQFRTNDSAAYD 86 (210)
Q Consensus 8 sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar-~~~v~nlp~lg~~P~~~~~~~~~~~~~~~ 86 (210)
.|++| +||+||+..... ... ....+...+++.+.++.|.+..-| .|+++++|++..++.... .+..-.. .-
T Consensus 121 klVtI-~IG~ND~c~~~~-~~~----~~~~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~-~p~~c~~-~~ 192 (288)
T cd01824 121 KLITI-FIGGNDLCSLCE-DAN----PGSPQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTK-KPLQCET-LL 192 (288)
T ss_pred cEEEE-EecchhHhhhcc-ccc----CcCHHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhcc-CCccccc-cC
Confidence 36899 999999975321 111 133556667888888888887754 578888888765544321 0000000 00
Q ss_pred CCcch----------hHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCccccccccccc
Q 047993 87 QFHCL----------KCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGG 156 (210)
Q Consensus 87 ~~~~~----------~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g 156 (210)
...|. .++......|++.+++..+.-.-+..+..+++.. +|.+.+..
T Consensus 193 ~~~C~c~~~~~~~~~~~~~~~~~~y~~~~~eia~~~~~~~~~f~vv~qP---f~~~~~~~-------------------- 249 (288)
T cd01824 193 APECPCLLGPTENSYQDLKKFYKEYQNEVEEIVESGEFDREDFAVVVQP---FFEDTSLP-------------------- 249 (288)
T ss_pred CCcCCCcCCCCcchHHHHHHHHHHHHHHHHHHHhcccccccCccEEeeC---chhccccc--------------------
Confidence 11231 2455566667766665544311111222333311 11110000
Q ss_pred ccCCCccccCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhccC
Q 047993 157 DYDFNLTKMCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRDIF 205 (210)
Q Consensus 157 ~~~~~~~~~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~~~ 205 (210)
. .... .-.+++-+|.+||++++|.++|+.++...+
T Consensus 250 ~-------------~~~g-~d~~~~~~D~~Hps~~G~~~ia~~lwn~m~ 284 (288)
T cd01824 250 P-------------LPDG-PDLSFFSPDCFHFSQRGHAIAANALWNNLL 284 (288)
T ss_pred c-------------ccCC-CcchhcCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 0 0000 112677899999999999999999998766
No 23
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.63 E-value=3.4e-07 Score=71.88 Aligned_cols=117 Identities=17% Similarity=0.149 Sum_probs=73.8
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCC-cccCcccccccCCCccc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPV-GCFPIYLTQFRTNDSAA 84 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~l-g~~P~~~~~~~~~~~~~ 84 (210)
.-.+++| .+|.||.... ..+ .++..+++...|+++...+++ ++++++||. +..|.
T Consensus 67 ~~d~vii-~~G~ND~~~~---~~~-------~~~~~~~~~~~i~~i~~~~~~-vil~~~~~~~~~~~~------------ 122 (185)
T cd01832 67 RPDLVTL-LAGGNDILRP---GTD-------PDTYRADLEEAVRRLRAAGAR-VVVFTIPDPAVLEPF------------ 122 (185)
T ss_pred CCCEEEE-eccccccccC---CCC-------HHHHHHHHHHHHHHHHhCCCE-EEEecCCCccccchh------------
Confidence 3478999 9999998641 111 234455666666777666774 888888877 21111
Q ss_pred ccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCccc
Q 047993 85 YDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTK 164 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~ 164 (210)
....+.....+|+.|++..++ + ++.++|++..+. +..
T Consensus 123 ------~~~~~~~~~~~n~~l~~~a~~----~---~v~~vd~~~~~~----------~~~-------------------- 159 (185)
T cd01832 123 ------RRRVRARLAAYNAVIRAVAAR----Y---GAVHVDLWEHPE----------FAD-------------------- 159 (185)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHH----c---CCEEEecccCcc----------cCC--------------------
Confidence 112344577788888776542 1 477888864321 000
Q ss_pred cCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHh
Q 047993 165 MCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIR 202 (210)
Q Consensus 165 ~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~ 202 (210)
.+++.-|++||++++|++||+.+++
T Consensus 160 -------------~~~~~~DgiHpn~~G~~~~A~~i~~ 184 (185)
T cd01832 160 -------------PRLWASDRLHPSAAGHARLAALVLA 184 (185)
T ss_pred -------------ccccccCCCCCChhHHHHHHHHHhh
Confidence 0112239999999999999999875
No 24
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.62 E-value=2.5e-07 Score=73.77 Aligned_cols=133 Identities=10% Similarity=0.051 Sum_probs=80.8
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAY 85 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~ 85 (210)
.-++++| .+|+||....... ....+++..+++.+.|+++.+.|++ +++++.||... +..
T Consensus 65 ~pdlVii-~~G~ND~~~~~~~------~~~~~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~~---~~~---------- 123 (198)
T cd01821 65 PGDYVLI-QFGHNDQKPKDPE------YTEPYTTYKEYLRRYIAEARAKGAT-PILVTPVTRRT---FDE---------- 123 (198)
T ss_pred CCCEEEE-ECCCCCCCCCCCC------CCCcHHHHHHHHHHHHHHHHHCCCe-EEEECCccccc---cCC----------
Confidence 3589999 9999998653210 0112445567777778888888886 55555554211 100
Q ss_pred cCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCcccc
Q 047993 86 DQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTKM 165 (210)
Q Consensus 86 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~~ 165 (210)
.. ..+.....||+.+++..++. .+.++|+++.+.+..+.-.. .. .. .. .
T Consensus 124 --~~---~~~~~~~~~~~~~~~~a~~~-------~~~~vD~~~~~~~~~~~~g~---~~--~~-------~~-------~ 172 (198)
T cd01821 124 --GG---KVEDTLGDYPAAMRELAAEE-------GVPLIDLNAASRALYEAIGP---EK--SK-------KY-------F 172 (198)
T ss_pred --CC---cccccchhHHHHHHHHHHHh-------CCCEEecHHHHHHHHHHhCh---Hh--HH-------hh-------C
Confidence 00 12233466788777765433 36689999998776553110 01 00 00 0
Q ss_pred CCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhc
Q 047993 166 CGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRD 203 (210)
Q Consensus 166 c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~ 203 (210)
.++.-|++||++++|++||+.|++.
T Consensus 173 -------------~~~~~DgvHp~~~G~~~~a~~i~~~ 197 (198)
T cd01821 173 -------------PEGPGDNTHFSEKGADVVARLVAEE 197 (198)
T ss_pred -------------cCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 1344599999999999999998863
No 25
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=98.54 E-value=1.1e-06 Score=71.05 Aligned_cols=120 Identities=20% Similarity=0.233 Sum_probs=74.9
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcC-CcEEEEeCCCCCcccCcccccccCCCccc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFG-AVRVVVPGNFPVGCFPIYLTQFRTNDSAA 84 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~G-ar~~~v~nlp~lg~~P~~~~~~~~~~~~~ 84 (210)
.-.+++| ++|+||+.... + +++..+++...|++|.+.. ..+|+++++||.+..|
T Consensus 89 ~pd~VvI-~~G~ND~~~~~----~-------~~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~------------- 143 (214)
T cd01820 89 NPKVVVL-LIGTNNIGHTT----T-------AEEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP------------- 143 (214)
T ss_pred CCCEEEE-EecccccCCCC----C-------HHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc-------------
Confidence 3578899 99999985321 1 3345566777777777653 3468888887654321
Q ss_pred ccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCccc
Q 047993 85 YDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTK 164 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~ 164 (210)
..+......+|+.+++... +. ..+.++|++..+.+ .+ |.
T Consensus 144 -------~~~~~~~~~~n~~l~~~~~----~~--~~v~~vd~~~~~~~----------~~-----------g~------- 182 (214)
T cd01820 144 -------NPLRERNAQVNRLLAVRYD----GL--PNVTFLDIDKGFVQ----------SD-----------GT------- 182 (214)
T ss_pred -------hhHHHHHHHHHHHHHHHhc----CC--CCEEEEeCchhhcc----------cC-----------CC-------
Confidence 1123345667777765432 22 25788998765421 01 11
Q ss_pred cCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhc
Q 047993 165 MCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRD 203 (210)
Q Consensus 165 ~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~ 203 (210)
..+.++.|++||++++|++||+.+.+.
T Consensus 183 ------------~~~~~~~DGlHpn~~Gy~~~a~~l~~~ 209 (214)
T cd01820 183 ------------ISHHDMPDYLHLTAAGYRKWADALHPT 209 (214)
T ss_pred ------------cCHhhcCCCCCCCHHHHHHHHHHHHHH
Confidence 011134699999999999999998764
No 26
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=98.42 E-value=2.8e-06 Score=66.01 Aligned_cols=47 Identities=23% Similarity=0.316 Sum_probs=31.0
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCC
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNF 65 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp 65 (210)
.-.+++| .+|+||..... + ..+..+++...++++.+.|++ ++++++|
T Consensus 64 ~pd~v~i-~~G~ND~~~~~----~-------~~~~~~~l~~li~~~~~~~~~-vil~~~~ 110 (177)
T cd01822 64 KPDLVIL-ELGGNDGLRGI----P-------PDQTRANLRQMIETAQARGAP-VLLVGMQ 110 (177)
T ss_pred CCCEEEE-eccCcccccCC----C-------HHHHHHHHHHHHHHHHHCCCe-EEEEecC
Confidence 4478999 99999975321 1 234456677777777777776 5565553
No 27
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.41 E-value=3.7e-06 Score=65.38 Aligned_cols=119 Identities=18% Similarity=0.222 Sum_probs=73.6
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCcccCcccccccCCCccc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGA-VRVVVPGNFPVGCFPIYLTQFRTNDSAA 84 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Ga-r~~~v~nlp~lg~~P~~~~~~~~~~~~~ 84 (210)
.-.++++ .+|+||+... .+ .+...+++.+.|+++.+.+. .+++++.+||. | ..
T Consensus 50 ~p~~vvi-~~G~ND~~~~----~~-------~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~---~--~~--------- 103 (171)
T cd04502 50 QPRRVVL-YAGDNDLASG----RT-------PEEVLRDFRELVNRIRAKLPDTPIAIISIKPS---P--AR--------- 103 (171)
T ss_pred CCCEEEE-EEecCcccCC----CC-------HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCC---C--cc---------
Confidence 4468999 9999997532 11 34456777777787877653 35677666542 1 10
Q ss_pred ccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCccc
Q 047993 85 YDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTK 164 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~ 164 (210)
...+.....+|+.+++..+ +. ..+.++|++..+.. . . +.
T Consensus 104 -------~~~~~~~~~~n~~~~~~a~----~~--~~v~~vD~~~~~~~-----------~---~-------~~------- 142 (171)
T cd04502 104 -------WALRPKIRRFNALLKELAE----TR--PNLTYIDVASPMLD-----------A---D-------GK------- 142 (171)
T ss_pred -------hhhHHHHHHHHHHHHHHHh----cC--CCeEEEECcHHHhC-----------C---C-------CC-------
Confidence 0122335677877776543 22 24779999866521 1 0 00
Q ss_pred cCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHh
Q 047993 165 MCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIR 202 (210)
Q Consensus 165 ~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~ 202 (210)
...+++..|++||++++|+++|+.+..
T Consensus 143 -----------~~~~~~~~DGlH~n~~Gy~~~a~~l~~ 169 (171)
T cd04502 143 -----------PRAELFQEDGLHLNDAGYALWRKVIKP 169 (171)
T ss_pred -----------cChhhcCCCCCCCCHHHHHHHHHHHHh
Confidence 012345579999999999999998864
No 28
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=98.41 E-value=3.4e-06 Score=71.60 Aligned_cols=55 Identities=16% Similarity=0.067 Sum_probs=39.4
Q ss_pred CeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCc--EEEEeCCCCC
Q 047993 8 SLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAV--RVVVPGNFPV 67 (210)
Q Consensus 8 sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar--~~~v~nlp~l 67 (210)
.+++| ++|+||.-... .+.. ....+++--+++.+.|+.|.+..-+ +|+++++|++
T Consensus 124 ~lVtI-~lGgND~C~g~-~d~~---~~tp~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~ 180 (305)
T cd01826 124 ALVIY-SMIGNDVCNGP-NDTI---NHTTPEEFYENVMEALKYLDTKLPNGSHVILVGLVDG 180 (305)
T ss_pred eEEEE-EeccchhhcCC-Cccc---cCcCHHHHHHHHHHHHHHHHhcCCCCCEEEEEeccch
Confidence 78899 99999997542 0100 0233555667888889999888754 8999999995
No 29
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.39 E-value=2.6e-06 Score=67.11 Aligned_cols=119 Identities=13% Similarity=0.088 Sum_probs=69.7
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCcccCcccccccCCCccc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGA-VRVVVPGNFPVGCFPIYLTQFRTNDSAA 84 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Ga-r~~~v~nlp~lg~~P~~~~~~~~~~~~~ 84 (210)
.-++++| .+|+||..... ..+ .+...+++...|+.+.+.+. .++++.+.||......
T Consensus 67 ~pd~Vii-~~G~ND~~~~~--~~~-------~~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~------------ 124 (188)
T cd01827 67 NPNIVII-KLGTNDAKPQN--WKY-------KDDFKKDYETMIDSFQALPSKPKIYICYPIPAYYGDG------------ 124 (188)
T ss_pred CCCEEEE-EcccCCCCCCC--Ccc-------HHHHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccCC------------
Confidence 3478999 99999986421 111 22334556666777666653 4777877766432110
Q ss_pred ccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCccc
Q 047993 85 YDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTK 164 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~ 164 (210)
.. ...+...+.+|+.+++..+ ++ .+.++|+++.+ .. .
T Consensus 125 ----~~-~~~~~~~~~~~~~~~~~a~----~~---~~~~vD~~~~~------------~~------------~------- 161 (188)
T cd01827 125 ----GF-INDNIIKKEIQPMIDKIAK----KL---NLKLIDLHTPL------------KG------------K------- 161 (188)
T ss_pred ----Cc-cchHHHHHHHHHHHHHHHH----Hc---CCcEEEccccc------------cC------------C-------
Confidence 00 0112344556666665433 32 35577876432 01 0
Q ss_pred cCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhc
Q 047993 165 MCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRD 203 (210)
Q Consensus 165 ~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~ 203 (210)
+ .++-|++||++++|++||+.+++.
T Consensus 162 ----~----------~~~~Dg~Hpn~~G~~~~A~~i~~~ 186 (188)
T cd01827 162 ----P----------ELVPDWVHPNEKGAYILAKVVYKA 186 (188)
T ss_pred ----c----------cccCCCCCcCHHHHHHHHHHHHHH
Confidence 0 123499999999999999999865
No 30
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.35 E-value=2.1e-06 Score=67.38 Aligned_cols=128 Identities=17% Similarity=0.028 Sum_probs=75.2
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHc-CCcEEEEeCCCCCcccCcccccccCCCccc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDF-GAVRVVVPGNFPVGCFPIYLTQFRTNDSAA 84 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~-Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~ 84 (210)
.-++++| .+|+||..... .+ .+...+++...|+++.+. ...+|++++.||....+...
T Consensus 56 ~pd~Vii-~~G~ND~~~~~---~~-------~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~~~---------- 114 (189)
T cd01825 56 PPDLVIL-SYGTNEAFNKQ---LN-------ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTGAG---------- 114 (189)
T ss_pred CCCEEEE-ECCCcccccCC---CC-------HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCCCC----------
Confidence 4478899 99999975321 11 334566777777777764 46678888877653322100
Q ss_pred ccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCccc
Q 047993 85 YDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTK 164 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~ 164 (210)
....+.....+|+.+++.. +++ .+.++|+++.+... | +. .
T Consensus 115 ------~~~~~~~~~~~~~~~~~~a----~~~---~v~~vd~~~~~~~~-----------------~-~~--~------- 154 (189)
T cd01825 115 ------RWRTPPGLDAVIAAQRRVA----KEE---GIAFWDLYAAMGGE-----------------G-GI--W------- 154 (189)
T ss_pred ------CcccCCcHHHHHHHHHHHH----HHc---CCeEEeHHHHhCCc-----------------c-hh--h-------
Confidence 0011122455666665543 332 27799998775210 1 10 0
Q ss_pred cCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHhc
Q 047993 165 MCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIRD 203 (210)
Q Consensus 165 ~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~~ 203 (210)
......++..|++|||+++|++||+.+.+.
T Consensus 155 ---------~~~~~~~~~~Dg~Hp~~~G~~~~a~~i~~~ 184 (189)
T cd01825 155 ---------QWAEPGLARKDYVHLTPRGYERLANLLYEA 184 (189)
T ss_pred ---------HhhcccccCCCcccCCcchHHHHHHHHHHH
Confidence 000112345699999999999999998764
No 31
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.32 E-value=2.8e-06 Score=67.32 Aligned_cols=123 Identities=13% Similarity=0.146 Sum_probs=68.3
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAY 85 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~ 85 (210)
+-++++| .+|+||....... .+... .++..+.+...++.+ +.++ +++++++||+....
T Consensus 69 ~pd~V~i-~~G~ND~~~~~~~-~~~~~----~~~~~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~-------------- 126 (193)
T cd01835 69 VPNRLVL-SVGLNDTARGGRK-RPQLS----ARAFLFGLNQLLEEA-KRLV-PVLVVGPTPVDEAK-------------- 126 (193)
T ss_pred CCCEEEE-EecCcccccccCc-ccccC----HHHHHHHHHHHHHHH-hcCC-cEEEEeCCCccccc--------------
Confidence 4578999 9999999754211 11111 112222222223322 2344 47787877653210
Q ss_pred cCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCcccc
Q 047993 86 DQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTKM 165 (210)
Q Consensus 86 ~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~~ 165 (210)
....+.....+|+.+++..++ + .+.++|++..+.+ ++ . .
T Consensus 127 -----~~~~~~~~~~~n~~~~~~a~~----~---~~~~vd~~~~~~~---~~------~------------~-------- 165 (193)
T cd01835 127 -----MPYSNRRIARLETAFAEVCLR----R---DVPFLDTFTPLLN---HP------Q------------W-------- 165 (193)
T ss_pred -----cchhhHHHHHHHHHHHHHHHH----c---CCCeEeCccchhc---Cc------H------------H--------
Confidence 012244567778877776543 2 3568898865432 00 0 0
Q ss_pred CCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHh
Q 047993 166 CGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIR 202 (210)
Q Consensus 166 c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~ 202 (210)
..+++..|++||++++|++||+.+.+
T Consensus 166 -----------~~~~~~~Dg~Hpn~~G~~~~a~~~~~ 191 (193)
T cd01835 166 -----------RRELAATDGIHPNAAGYGWLAWLVLH 191 (193)
T ss_pred -----------HHhhhccCCCCCCHHHHHHHHHHHhc
Confidence 00122249999999999999999864
No 32
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.31 E-value=7.3e-06 Score=64.22 Aligned_cols=118 Identities=14% Similarity=0.048 Sum_probs=70.6
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCcccCcccccccCCCccc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGA-VRVVVPGNFPVGCFPIYLTQFRTNDSAA 84 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Ga-r~~~v~nlp~lg~~P~~~~~~~~~~~~~ 84 (210)
.-.+++| .+|+||.... . +..+++...|++|.+.+- .+|++++.|+. |......
T Consensus 57 ~pd~vii-~~G~ND~~~~----------~----~~~~~~~~~i~~i~~~~p~~~iil~~~~~~---~~~~~~~------- 111 (177)
T cd01844 57 PADLYII-DCGPNIVGAE----------A----MVRERLGPLVKGLRETHPDTPILLVSPRYC---PDAELTP------- 111 (177)
T ss_pred CCCEEEE-EeccCCCccH----------H----HHHHHHHHHHHHHHHHCcCCCEEEEecCCC---CccccCc-------
Confidence 4478888 8999996421 0 556777888888887764 46777777664 2211110
Q ss_pred ccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCccc
Q 047993 85 YDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTK 164 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~ 164 (210)
......++....+|+.++ .++++ ...++.++|.++++ .. .
T Consensus 112 ----~~~~~~~~~~~~~~~~~~----~~~~~-~~~~v~~id~~~~~------------~~--~----------------- 151 (177)
T cd01844 112 ----GRGKLTLAVRRALREAFE----KLRAD-GVPNLYYLDGEELL------------GP--D----------------- 151 (177)
T ss_pred ----chhHHHHHHHHHHHHHHH----HHHhc-CCCCEEEecchhhc------------CC--C-----------------
Confidence 112233444444554443 33322 23367888875432 11 0
Q ss_pred cCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHh
Q 047993 165 MCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIR 202 (210)
Q Consensus 165 ~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~ 202 (210)
.-++.|++|||+++|+++|+.+..
T Consensus 152 --------------~~~~~DglHpn~~Gy~~~a~~l~~ 175 (177)
T cd01844 152 --------------GEALVDGIHPTDLGHMRYADRFEP 175 (177)
T ss_pred --------------CCCCCCCCCCCHHHHHHHHHHHhh
Confidence 003459999999999999998875
No 33
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=98.25 E-value=7.2e-06 Score=65.35 Aligned_cols=44 Identities=18% Similarity=0.238 Sum_probs=31.0
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEE
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVV 61 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v 61 (210)
+-++++| .+|+||.... .+ .++..+++...++.+.+.|++.+++
T Consensus 71 ~pd~Vii-~~GtND~~~~----~~-------~~~~~~~l~~li~~~~~~~~~~ill 114 (191)
T PRK10528 71 QPRWVLV-ELGGNDGLRG----FP-------PQQTEQTLRQIIQDVKAANAQPLLM 114 (191)
T ss_pred CCCEEEE-EeccCcCccC----CC-------HHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 4478899 9999997532 11 3355566777777777888887766
No 34
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=98.20 E-value=1.6e-05 Score=60.86 Aligned_cols=22 Identities=27% Similarity=0.339 Sum_probs=19.3
Q ss_pred eeecCCChhHHHHHHHHHHHHh
Q 047993 181 ISWDGVHLTQKANKYMAMWLIR 202 (210)
Q Consensus 181 ~fwD~~HPT~~~h~~~A~~~~~ 202 (210)
+..|++||+++||+++|+.+.+
T Consensus 127 ~~~DgiHpn~~G~~~~a~~i~~ 148 (150)
T cd01840 127 FYGDGVHPNPAGAKLYAALIAK 148 (150)
T ss_pred hcCCCCCCChhhHHHHHHHHHH
Confidence 3359999999999999999875
No 35
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=98.10 E-value=1.9e-05 Score=61.40 Aligned_cols=22 Identities=18% Similarity=0.036 Sum_probs=19.5
Q ss_pred eecCCChhHHHHHHHHHHHHhc
Q 047993 182 SWDGVHLTQKANKYMAMWLIRD 203 (210)
Q Consensus 182 fwD~~HPT~~~h~~~A~~~~~~ 203 (210)
+.|++||++++|++||+.+++-
T Consensus 146 ~~DgiHPn~~G~~~iA~~l~~~ 167 (169)
T cd01831 146 IGCDWHPTVAGHQKIAKHLLPA 167 (169)
T ss_pred cCCCCCCCHHHHHHHHHHHHHH
Confidence 4699999999999999998753
No 36
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=97.51 E-value=0.00034 Score=56.51 Aligned_cols=137 Identities=17% Similarity=0.153 Sum_probs=87.4
Q ss_pred CCCeeEEcccccchhhhhhhcC-CchhhHhhhHHHHHHHHHHHHHHHHHcC-CcEEEEeCCCCCcccCcccccccCCCcc
Q 047993 6 KSSLFIVGEIGENDYKYALFQG-KTVEEVKTLVPEVVQAIKDAVTRVIDFG-AVRVVVPGNFPVGCFPIYLTQFRTNDSA 83 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~-~~~~~~~~~v~~~v~~~~~~v~~L~~~G-ar~~~v~nlp~lg~~P~~~~~~~~~~~~ 83 (210)
.-++++| +.|+||-...-... ....- +++-++++.+.++-|...- -.+|++.+-||+...-..+....
T Consensus 68 ~p~lvtV-ffGaNDs~l~~~~~~~~hvP----l~Ey~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~~e----- 137 (245)
T KOG3035|consen 68 QPVLVTV-FFGANDSCLPEPSSLGQHVP----LEEYKDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQEQE----- 137 (245)
T ss_pred CceEEEE-EecCccccCCCCCCCCCccC----HHHHHHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHhcc-----
Confidence 3478999 99999986431111 11111 3344566666666666554 45788888888876543332211
Q ss_pred cccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCcc
Q 047993 84 AYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLT 163 (210)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~ 163 (210)
.+ ..-..+.|+....|++.+.+..+++ ++..+|+.+.+.+ .+ .
T Consensus 138 ~~--~~~~~RtNe~~~~Ya~ac~~la~e~-------~l~~vdlws~~Q~----------~~------------d------ 180 (245)
T KOG3035|consen 138 PY--VLGPERTNETVGTYAKACANLAQEI-------GLYVVDLWSKMQE----------SD------------D------ 180 (245)
T ss_pred ch--hccchhhhhHHHHHHHHHHHHHHHh-------CCeeeeHHhhhhh----------cc------------c------
Confidence 00 1223458899999999988877655 4567888776533 01 0
Q ss_pred ccCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHh
Q 047993 164 KMCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIR 202 (210)
Q Consensus 164 ~~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~ 202 (210)
..+-.|||++|.|..+++++.+.++.
T Consensus 181 -------------w~~~~ltDGLHlS~~G~~ivf~Ei~k 206 (245)
T KOG3035|consen 181 -------------WQTSCLTDGLHLSPKGNKIVFDEILK 206 (245)
T ss_pred -------------HHHHHhccceeeccccchhhHHHHHH
Confidence 01124789999999999999999876
No 37
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=97.29 E-value=0.0024 Score=51.30 Aligned_cols=23 Identities=26% Similarity=0.222 Sum_probs=20.6
Q ss_pred ecCCChhHHHHHHHHHHHHhccC
Q 047993 183 WDGVHLTQKANKYMAMWLIRDIF 205 (210)
Q Consensus 183 wD~~HPT~~~h~~~A~~~~~~~~ 205 (210)
+|++||+.++++.+|+.+.+...
T Consensus 187 ~Dg~H~n~~Gy~~~a~~l~~~l~ 209 (216)
T COG2755 187 EDGLHPNAKGYQALAEALAEVLA 209 (216)
T ss_pred CCCCCcCHhhHHHHHHHHHHHHH
Confidence 89999999999999999987543
No 38
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.93 E-value=0.0048 Score=52.68 Aligned_cols=136 Identities=21% Similarity=0.254 Sum_probs=78.3
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHc---CCcEEEEeCCCCCcccCcccccccCCCc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDF---GAVRVVVPGNFPVGCFPIYLTQFRTNDS 82 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~---Gar~~~v~nlp~lg~~P~~~~~~~~~~~ 82 (210)
.-+.++| .+|+||...+...+. .. .---+.-.+.+..-|..|.+. -.-+++.+++|+. +
T Consensus 177 ~~a~vVV-~lGaND~q~~~~gd~-~~--kf~S~~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~------r-------- 238 (354)
T COG2845 177 KPAAVVV-MLGANDRQDFKVGDV-YE--KFRSDEWTKEYEKRVDAILKIAHTHKVPVLWVGMPPF------R-------- 238 (354)
T ss_pred CccEEEE-EecCCCHHhcccCCe-ee--ecCchHHHHHHHHHHHHHHHHhcccCCcEEEeeCCCc------c--------
Confidence 3456777 899999986542221 00 001123445555555555543 2346888998753 2
Q ss_pred ccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCc
Q 047993 83 AAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNL 162 (210)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~ 162 (210)
.+.+++-..++|..+++.++.+..+ ++|+++.|-+ .+.+. |.. . |.
T Consensus 239 --------~~~l~~dm~~ln~iy~~~vE~~~gk-------~i~i~d~~v~---e~G~~-f~~---------~-~~----- 284 (354)
T COG2845 239 --------KKKLNADMVYLNKIYSKAVEKLGGK-------FIDIWDGFVD---EGGKD-FVT---------T-GV----- 284 (354)
T ss_pred --------ccccchHHHHHHHHHHHHHHHhCCe-------EEEecccccc---cCCce-eEE---------e-cc-----
Confidence 2456777899999999998876432 5566544311 11110 000 0 11
Q ss_pred cccCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHh
Q 047993 163 TKMCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIR 202 (210)
Q Consensus 163 ~~~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~ 202 (210)
..-..+-++.-=|++|.|.+|-+.||.++.+
T Consensus 285 ---------D~NGq~vrlR~~DGIh~T~~Gkrkla~~~~k 315 (354)
T COG2845 285 ---------DINGQPVRLRAKDGIHFTKEGKRKLAFYLEK 315 (354)
T ss_pred ---------ccCCceEEEeccCCceechhhHHHHHHHHHH
Confidence 0111233444559999999999999998875
No 39
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=95.45 E-value=0.24 Score=43.61 Aligned_cols=56 Identities=27% Similarity=0.243 Sum_probs=36.4
Q ss_pred CeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEE-eCCCCC
Q 047993 8 SLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVV-PGNFPV 67 (210)
Q Consensus 8 sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v-~nlp~l 67 (210)
-|+.| |||+||+-..-. +. .+.+..++.--..|.++++.|.+.==|.+|+ ++++++
T Consensus 186 KLi~I-fIG~ND~c~~c~-~~--~~~~~~~~~~~~~i~~Al~~L~~nvPR~iV~lvg~~~~ 242 (397)
T KOG3670|consen 186 KLITI-FIGTNDLCAYCE-GP--ETPPSPVDQHKRNIRKALEILRDNVPRTIVSLVGMFNV 242 (397)
T ss_pred EEEEE-Eeccchhhhhcc-CC--CCCCCchhHHHHHHHHHHHHHHhcCCceEEEEecCCCH
Confidence 37899 999999975421 21 1223445556677888999888877776644 444443
No 40
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=94.83 E-value=0.078 Score=41.93 Aligned_cols=116 Identities=19% Similarity=0.219 Sum_probs=44.5
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcC-CcEEEEeCCCCCcccCcccccccCCCccc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFG-AVRVVVPGNFPVGCFPIYLTQFRTNDSAA 84 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~G-ar~~~v~nlp~lg~~P~~~~~~~~~~~~~ 84 (210)
+.++|++ ..|.| + . . +....++...|+.|.+.= -.-|+++....- |...
T Consensus 59 ~a~~~~l-d~~~N-----~-~---~-------~~~~~~~~~fv~~iR~~hP~tPIllv~~~~~---~~~~---------- 108 (178)
T PF14606_consen 59 DADLIVL-DCGPN-----M-S---P-------EEFRERLDGFVKTIREAHPDTPILLVSPIPY---PAGY---------- 108 (178)
T ss_dssp --SEEEE-EESHH-----C-C---T-------TTHHHHHHHHHHHHHTT-SSS-EEEEE-------TTTT----------
T ss_pred CCCEEEE-EeecC-----C-C---H-------HHHHHHHHHHHHHHHHhCCCCCEEEEecCCc---cccc----------
Confidence 4578888 88888 1 1 1 122344445566665543 455666543221 1111
Q ss_pred ccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCcccCcccccccccccccCCCccc
Q 047993 85 YDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDNGSMQKACCGIGGDYDFNLTK 164 (210)
Q Consensus 85 ~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~~~~~~~C~~~~g~~~~~~~~ 164 (210)
...........+|+.+++.+++++++ .+-++.++|-..++-+ ..
T Consensus 109 -----~~~~~~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~llg~----------d~-------------------- 152 (178)
T PF14606_consen 109 -----FDNSRGETVEEFREALREAVEQLRKE-GDKNLYYLDGEELLGD----------DH-------------------- 152 (178)
T ss_dssp -----S--TTS--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS----------------------------------
T ss_pred -----cCchHHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhcCc----------cc--------------------
Confidence 11222345688999999999998653 4556777776543200 00
Q ss_pred cCCCCCCCCCCCCCCceeecCCChhHHHHHHHHHHHHh
Q 047993 165 MCGMSGVPVCENLDKRISWDGVHLTQKANKYMAMWLIR 202 (210)
Q Consensus 165 ~c~~~~~~~c~~~~~y~fwD~~HPT~~~h~~~A~~~~~ 202 (210)
-..-|++|||..||..+|+.+..
T Consensus 153 ---------------e~tvDgvHP~DlG~~~~a~~l~~ 175 (178)
T PF14606_consen 153 ---------------EATVDGVHPNDLGMMRMADALEP 175 (178)
T ss_dssp --------------------------------------
T ss_pred ---------------ccccccccccccccccccccccc
Confidence 01249999999999999998764
No 41
>cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=93.07 E-value=2.1 Score=33.85 Aligned_cols=19 Identities=32% Similarity=0.506 Sum_probs=17.8
Q ss_pred cCCChhHHHHHHHHHHHHh
Q 047993 184 DGVHLTQKANKYMAMWLIR 202 (210)
Q Consensus 184 D~~HPT~~~h~~~A~~~~~ 202 (210)
|+||.++.+|+.|++.++.
T Consensus 162 DgVHwn~~a~r~ls~lll~ 180 (183)
T cd01842 162 DGVHWNYVAHRRLSNLLLA 180 (183)
T ss_pred CCcCcCHHHHHHHHHHHHH
Confidence 8999999999999999875
No 42
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=91.03 E-value=0.21 Score=43.71 Aligned_cols=68 Identities=19% Similarity=0.154 Sum_probs=50.3
Q ss_pred CCCeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccc
Q 047993 6 KSSLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLT 75 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~ 75 (210)
.+.++.. |+|+||+...-.. .+....-..+......+..++..+..++.-+|+..|.|.++..|...-
T Consensus 98 ~~~~~~~-~a~gnd~A~gga~-~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~ 165 (370)
T COG3240 98 PNGLYIH-WAGGNDLAVGGAR-STEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALY 165 (370)
T ss_pred cccccCc-ccccccHhhhccc-cccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHH
Confidence 4677888 9999999865311 010011133445567778899999999999999999999999998875
No 43
>PLN02757 sirohydrochlorine ferrochelatase
Probab=88.39 E-value=1.4 Score=33.94 Aligned_cols=63 Identities=30% Similarity=0.443 Sum_probs=44.5
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEE
Q 047993 44 IKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIY 123 (210)
Q Consensus 44 ~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 123 (210)
+.++|+.|.+.|+++|+|+ |.++... ......+.+.++++++++|+.+|.+
T Consensus 60 l~eal~~l~~~g~~~vvVv--------P~FL~~G---------------------~H~~~DIp~~v~~~~~~~p~~~i~~ 110 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIVS--------PFFLSPG---------------------RHWQEDIPALTAEAAKEHPGVKYLV 110 (154)
T ss_pred HHHHHHHHHHCCCCEEEEE--------EhhhcCC---------------------cchHhHHHHHHHHHHHHCCCcEEEE
Confidence 6668888889999999984 7777531 1125567888888999999998887
Q ss_pred ee---hhHHHHHHHh
Q 047993 124 GD---YYTAFMWILG 135 (210)
Q Consensus 124 ~D---~~~~~~~i~~ 135 (210)
.. .+..+.+++.
T Consensus 111 ~~pLG~~p~l~~ll~ 125 (154)
T PLN02757 111 TAPIGLHELMVDVVN 125 (154)
T ss_pred CCCCCCCHHHHHHHH
Confidence 64 3335555444
No 44
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=87.37 E-value=2.8 Score=36.09 Aligned_cols=69 Identities=20% Similarity=0.235 Sum_probs=46.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHH
Q 047993 34 KTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELK 113 (210)
Q Consensus 34 ~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~ 113 (210)
+....-.++.+.+.++.+.++|.+.|+++++|+. ..+ . ..+.++. |..+++.+..++
T Consensus 53 Pg~~r~sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd~-----~---gs~A~~~--------------~g~v~~air~iK 109 (322)
T PRK13384 53 PGISRLPESALADEIERLYALGIRYVMPFGISHH-KDA-----K---GSDTWDD--------------NGLLARMVRTIK 109 (322)
T ss_pred CCcceECHHHHHHHHHHHHHcCCCEEEEeCCCCC-CCC-----C---cccccCC--------------CChHHHHHHHHH
Confidence 3444556888999999999999999999999642 221 1 1112222 556677888888
Q ss_pred hhCCCceEEEeeh
Q 047993 114 NEHPNVAIIYGDY 126 (210)
Q Consensus 114 ~~~~~~~i~~~D~ 126 (210)
+.+|+.- ++.|+
T Consensus 110 ~~~pdl~-vi~DV 121 (322)
T PRK13384 110 AAVPEMM-VIPDI 121 (322)
T ss_pred HHCCCeE-EEeee
Confidence 8889864 44454
No 45
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=87.03 E-value=3.2 Score=35.64 Aligned_cols=69 Identities=23% Similarity=0.331 Sum_probs=46.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHH
Q 047993 34 KTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELK 113 (210)
Q Consensus 34 ~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~ 113 (210)
+......++.+.+.++++.++|.+.|+++++|.. ..+. ..++++. |..+++.+..++
T Consensus 43 PG~~r~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~~--------gs~A~~~--------------~g~v~~air~iK 99 (314)
T cd00384 43 PGVYRLSVDSLVEEAEELADLGIRAVILFGIPEH-KDEI--------GSEAYDP--------------DGIVQRAIRAIK 99 (314)
T ss_pred CCceeeCHHHHHHHHHHHHHCCCCEEEEECCCCC-CCCC--------cccccCC--------------CChHHHHHHHHH
Confidence 4444556899999999999999999999999642 2211 1112222 455677788888
Q ss_pred hhCCCceEEEeeh
Q 047993 114 NEHPNVAIIYGDY 126 (210)
Q Consensus 114 ~~~~~~~i~~~D~ 126 (210)
+++|+.- ++.|+
T Consensus 100 ~~~p~l~-vi~Dv 111 (314)
T cd00384 100 EAVPELV-VITDV 111 (314)
T ss_pred HhCCCcE-EEEee
Confidence 8888753 44454
No 46
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=87.00 E-value=2.9 Score=35.89 Aligned_cols=71 Identities=21% Similarity=0.153 Sum_probs=47.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCc-ccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHH
Q 047993 34 KTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVG-CFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQEL 112 (210)
Q Consensus 34 ~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l 112 (210)
+....-.++.+.+.++++.++|.+.|+++++|+-. ..+.. ..+.++. |..+++.+..+
T Consensus 43 PG~~r~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~~-------gs~a~~~--------------~g~v~~air~i 101 (320)
T cd04824 43 PGINRYGVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDRS-------GSAADDE--------------DGPVIQAIKLI 101 (320)
T ss_pred CCceeeCHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcCc-------cccccCC--------------CChHHHHHHHH
Confidence 34445567889999999999999999999997532 22220 1112222 45567778888
Q ss_pred HhhCCCceEEEeeh
Q 047993 113 KNEHPNVAIIYGDY 126 (210)
Q Consensus 113 ~~~~~~~~i~~~D~ 126 (210)
++++|+.- ++.|+
T Consensus 102 K~~~pdl~-vi~Dv 114 (320)
T cd04824 102 REEFPELL-IACDV 114 (320)
T ss_pred HHhCCCcE-EEEee
Confidence 88888753 44454
No 47
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=86.29 E-value=3.3 Score=35.69 Aligned_cols=69 Identities=19% Similarity=0.240 Sum_probs=46.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHH
Q 047993 34 KTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELK 113 (210)
Q Consensus 34 ~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~ 113 (210)
+....-.++.+.+.+++++++|.+.|+++++|.. ..+.. .++++. |..+.+.+..++
T Consensus 51 Pg~~r~s~d~l~~~v~~~~~~Gi~av~LFgv~~~-Kd~~g--------s~A~~~--------------~g~v~rair~iK 107 (323)
T PRK09283 51 PGVYRLSIDLLVKEAEEAVELGIPAVALFGVPEL-KDEDG--------SEAYNP--------------DGLVQRAIRAIK 107 (323)
T ss_pred CCceeeCHHHHHHHHHHHHHCCCCEEEEeCcCCC-CCccc--------ccccCC--------------CCHHHHHHHHHH
Confidence 3444556888999999999999999999998532 22111 112221 455677788888
Q ss_pred hhCCCceEEEeeh
Q 047993 114 NEHPNVAIIYGDY 126 (210)
Q Consensus 114 ~~~~~~~i~~~D~ 126 (210)
+++|+. +++.|+
T Consensus 108 ~~~p~l-~vi~DV 119 (323)
T PRK09283 108 KAFPEL-GVITDV 119 (323)
T ss_pred HhCCCc-EEEEee
Confidence 888886 345555
No 48
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=86.27 E-value=3.2 Score=35.71 Aligned_cols=70 Identities=20% Similarity=0.221 Sum_probs=46.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCC-CcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHH
Q 047993 34 KTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFP-VGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQEL 112 (210)
Q Consensus 34 ~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~-lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l 112 (210)
+......++.+.+.++++.++|.+.|++++++| -...+.. .++++. |..+++.+..+
T Consensus 46 Pg~~r~s~d~l~~~v~~~~~~Gi~~v~lFgv~~~~~KD~~g--------s~A~~~--------------~g~v~~air~i 103 (320)
T cd04823 46 PGVFRLSIDELLKEAEEAVDLGIPAVALFPVTPPELKSEDG--------SEAYNP--------------DNLVCRAIRAI 103 (320)
T ss_pred CCceeeCHHHHHHHHHHHHHcCCCEEEEecCCCcccCCccc--------ccccCC--------------CChHHHHHHHH
Confidence 344455688999999999999999999999843 1122111 111221 45567778888
Q ss_pred HhhCCCceEEEeeh
Q 047993 113 KNEHPNVAIIYGDY 126 (210)
Q Consensus 113 ~~~~~~~~i~~~D~ 126 (210)
++++|+. +++.|+
T Consensus 104 K~~~p~l-~vi~DV 116 (320)
T cd04823 104 KEAFPEL-GIITDV 116 (320)
T ss_pred HHhCCCc-EEEEee
Confidence 8888885 345554
No 49
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=82.66 E-value=5 Score=34.65 Aligned_cols=66 Identities=24% Similarity=0.446 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCC
Q 047993 39 EVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPN 118 (210)
Q Consensus 39 ~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~ 118 (210)
..++.+.+.+++++++|.+.|+++++.+ |..+... ..+.++. |..+++.+..+++.+|+
T Consensus 54 ~sid~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~---gs~a~~~--------------~g~v~~air~iK~~~pd 112 (324)
T PF00490_consen 54 YSIDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEE---GSEAYNP--------------DGLVQRAIRAIKKAFPD 112 (324)
T ss_dssp EEHHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS----GGGGST--------------TSHHHHHHHHHHHHSTT
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcc---hhcccCC--------------CChHHHHHHHHHHhCCC
Confidence 4578888999999999999999999842 2222211 1112222 45667778888889998
Q ss_pred ceEEEeeh
Q 047993 119 VAIIYGDY 126 (210)
Q Consensus 119 ~~i~~~D~ 126 (210)
. +++.|+
T Consensus 113 l-~vi~Dv 119 (324)
T PF00490_consen 113 L-LVITDV 119 (324)
T ss_dssp S-EEEEEE
T ss_pred c-EEEEec
Confidence 6 445554
No 50
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=80.98 E-value=4.6 Score=28.21 Aligned_cols=55 Identities=29% Similarity=0.471 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceE
Q 047993 42 QAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAI 121 (210)
Q Consensus 42 ~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 121 (210)
-.+.+.+++|.+.|+++++|. |.+.... ....+.+.+.+++++.++++.++
T Consensus 44 p~~~~~l~~l~~~g~~~v~vv--------Plfl~~G---------------------~h~~~dip~~~~~~~~~~~~~~i 94 (101)
T cd03416 44 PSLAEALDELAAQGATRIVVV--------PLFLLAG---------------------GHVKEDIPAALAAARARHPGVRI 94 (101)
T ss_pred CCHHHHHHHHHHcCCCEEEEE--------eeEeCCC---------------------ccccccHHHHHHHHHHHCCCeEE
Confidence 345667888899999999884 6666431 11234566777777778898888
Q ss_pred EEee
Q 047993 122 IYGD 125 (210)
Q Consensus 122 ~~~D 125 (210)
.+.+
T Consensus 95 ~~~~ 98 (101)
T cd03416 95 RYAP 98 (101)
T ss_pred EecC
Confidence 7654
No 51
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=80.75 E-value=13 Score=31.04 Aligned_cols=77 Identities=18% Similarity=0.149 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhh
Q 047993 36 LVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNE 115 (210)
Q Consensus 36 ~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~ 115 (210)
.++++++.+...++.|....-.-=+|+++.|+- ...+- . + .-.-..|++++. .|+..+.++.++
T Consensus 146 s~~ei~~~l~~~~~~l~~~nP~~kiilTVSPVr---l~~T~-~---~------~d~~~an~~SKs---~Lr~a~~~l~~~ 209 (251)
T PF08885_consen 146 SVEEILEDLEAIIDLLRSINPDIKIILTVSPVR---LIATF-R---D------RDGLVANQYSKS---TLRAAAHELVRA 209 (251)
T ss_pred CHHHHHHHHHHHHHHHHhhCCCceEEEEeccch---hhccc-c---c------ccchhhhhhhHH---HHHHHHHHHHhc
Confidence 567788888888888888765444566677753 33321 0 0 011233444543 577777888776
Q ss_pred CCCceEEEeehhHHH
Q 047993 116 HPNVAIIYGDYYTAF 130 (210)
Q Consensus 116 ~~~~~i~~~D~~~~~ 130 (210)
++ ++.||=.|.++
T Consensus 210 ~~--~v~YFPSYEiv 222 (251)
T PF08885_consen 210 FD--DVDYFPSYEIV 222 (251)
T ss_pred CC--CceEcchHhhc
Confidence 54 45677666554
No 52
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=78.19 E-value=1.6 Score=30.74 Aligned_cols=54 Identities=26% Similarity=0.501 Sum_probs=36.8
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEE
Q 047993 44 IKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIY 123 (210)
Q Consensus 44 ~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~ 123 (210)
+.+.+++|.+.|+++|+|+ |.++... ....+.+.+.+++++.++|+.+|.+
T Consensus 39 l~~~l~~l~~~g~~~ivvv--------P~fL~~G---------------------~h~~~DIp~~l~~~~~~~~~~~v~~ 89 (105)
T PF01903_consen 39 LEEALERLVAQGARRIVVV--------PYFLFPG---------------------YHVKRDIPEALAEARERHPGIEVRV 89 (105)
T ss_dssp CHHCCHHHHCCTCSEEEEE--------EESSSSS---------------------HHHHCHHHHHHCHHHHCSTTEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEE--------eeeecCc---------------------cchHhHHHHHHHHHHhhCCceEEEE
Confidence 3456788889999999885 7776421 1123447888888899999888877
Q ss_pred eeh
Q 047993 124 GDY 126 (210)
Q Consensus 124 ~D~ 126 (210)
...
T Consensus 90 ~~p 92 (105)
T PF01903_consen 90 APP 92 (105)
T ss_dssp ---
T ss_pred CCC
Confidence 654
No 53
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=77.26 E-value=12 Score=30.63 Aligned_cols=60 Identities=18% Similarity=0.261 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCce
Q 047993 41 VQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVA 120 (210)
Q Consensus 41 v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~ 120 (210)
..-+.+.++.|...|.|||+|+|-- ++ ....|+..++++++++++.+
T Consensus 85 ~~~l~di~~sl~~~Gf~~ivivngH----------------------gG-----------N~~~l~~~~~~l~~~~~~~~ 131 (237)
T PF02633_consen 85 IALLRDILRSLARHGFRRIVIVNGH----------------------GG-----------NIAALEAAARELRQEYPGVK 131 (237)
T ss_dssp HHHHHHHHHHHHHHT--EEEEEESS----------------------TT-----------HHHHHHHHHHHHHHHGCC-E
T ss_pred HHHHHHHHHHHHHcCCCEEEEEECC----------------------Hh-----------HHHHHHHHHHHHHhhCCCcE
Confidence 4445666888889999999998831 01 12256666777777778999
Q ss_pred EEEeehhHHHHHH
Q 047993 121 IIYGDYYTAFMWI 133 (210)
Q Consensus 121 i~~~D~~~~~~~i 133 (210)
+.+++.+.+....
T Consensus 132 v~~~~~~~~~~~~ 144 (237)
T PF02633_consen 132 VFVINWWQLAEDE 144 (237)
T ss_dssp EEEEEGGGCSHCH
T ss_pred EEEeechhccchh
Confidence 9999998876554
No 54
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=73.40 E-value=17 Score=31.33 Aligned_cols=71 Identities=18% Similarity=0.340 Sum_probs=47.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHH
Q 047993 34 KTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELK 113 (210)
Q Consensus 34 ~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~ 113 (210)
+....-.++.+.+.++++.++|.+-|+++++|+-+ .+... .+.+++. |..+++.+..++
T Consensus 53 Pgv~r~s~d~l~~~~~~~~~lGi~av~LFgvp~~~----~Kd~~---gs~A~~~--------------~givqravr~ik 111 (330)
T COG0113 53 PGVYRYSLDRLVEEAEELVDLGIPAVILFGVPDDS----KKDET---GSEAYDP--------------DGIVQRAVRAIK 111 (330)
T ss_pred CCceeccHHHHHHHHHHHHhcCCCEEEEeCCCccc----ccCcc---cccccCC--------------CChHHHHHHHHH
Confidence 34445568899999999999999999999998632 12111 1122332 446677788888
Q ss_pred hhCCCceEEEeeh
Q 047993 114 NEHPNVAIIYGDY 126 (210)
Q Consensus 114 ~~~~~~~i~~~D~ 126 (210)
+.+|+. +++.|+
T Consensus 112 ~~~p~l-~iitDv 123 (330)
T COG0113 112 EAFPEL-VVITDV 123 (330)
T ss_pred HhCCCe-EEEeee
Confidence 888854 445554
No 55
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=73.36 E-value=17 Score=25.96 Aligned_cols=52 Identities=27% Similarity=0.452 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceE
Q 047993 42 QAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAI 121 (210)
Q Consensus 42 ~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 121 (210)
-.+.+.+++|.+.|+++++|. |.+.... . |-+.+.+.+++++.+ |+.++
T Consensus 45 P~~~~~l~~l~~~g~~~i~vv--------P~fL~~G---------------------~-h~~~i~~~~~~~~~~-~~~~i 93 (117)
T cd03414 45 PSLPEALERLRALGARRVVVL--------PYLLFTG---------------------V-LMDRIEEQVAELAAE-PGIEF 93 (117)
T ss_pred CCHHHHHHHHHHcCCCEEEEE--------echhcCC---------------------c-hHHHHHHHHHHHHhC-CCceE
Confidence 346678888888999998885 6665421 0 122356677777776 77776
Q ss_pred EEe
Q 047993 122 IYG 124 (210)
Q Consensus 122 ~~~ 124 (210)
.+.
T Consensus 94 ~~~ 96 (117)
T cd03414 94 VLA 96 (117)
T ss_pred EEC
Confidence 653
No 56
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=68.62 E-value=19 Score=30.44 Aligned_cols=69 Identities=22% Similarity=0.284 Sum_probs=44.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhh
Q 047993 36 LVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNE 115 (210)
Q Consensus 36 ~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~ 115 (210)
...--+..+.+.+..|++.|.|.++++++|+- ....... .++.+ =|.-+-+.+..|+..
T Consensus 63 ~~r~G~~rL~e~l~plv~~Gl~sViLfgvv~~----~~Kd~~g---s~Ads--------------~~gpvi~ai~~lr~~ 121 (340)
T KOG2794|consen 63 IYRLGVNRLKEELAPLVAKGLRSVILFGVVPE----ALKDPTG---SEADS--------------DNGPVIRAIRLLRDR 121 (340)
T ss_pred hhHHHHHHHHHHHHHHHHhccceEEEecCCCc----cccCccc---ccccC--------------CCCcHHHHHHHHHHh
Confidence 34455788999999999999999999999742 2221111 11111 134445667778888
Q ss_pred CCCceEEEeeh
Q 047993 116 HPNVAIIYGDY 126 (210)
Q Consensus 116 ~~~~~i~~~D~ 126 (210)
+|+. +++.|.
T Consensus 122 fPdL-~i~cDV 131 (340)
T KOG2794|consen 122 FPDL-VIACDV 131 (340)
T ss_pred Ccce-EEEeee
Confidence 8986 345554
No 57
>PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
Probab=65.31 E-value=39 Score=27.30 Aligned_cols=110 Identities=17% Similarity=0.138 Sum_probs=59.3
Q ss_pred CCCeeEEcccccchhhhhhh-cC--CchhhHhhhHHHHHHHHHHHHHHHHHcCC--cEEEEeCCCCCcccCcccccccCC
Q 047993 6 KSSLFIVGEIGENDYKYALF-QG--KTVEEVKTLVPEVVQAIKDAVTRVIDFGA--VRVVVPGNFPVGCFPIYLTQFRTN 80 (210)
Q Consensus 6 ~~sl~~i~~iG~ND~~~~~~-~~--~~~~~~~~~v~~~v~~~~~~v~~L~~~Ga--r~~~v~nlp~lg~~P~~~~~~~~~ 80 (210)
..+++++ .+|..+...... .. ....+........+..+...+.+++.... .++++.+++|.... ... ..
T Consensus 100 ~pdvvV~-nsG~W~~~~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~v~~r~~~P~h~~--~~~-~~-- 173 (263)
T PF13839_consen 100 RPDVVVI-NSGLWYLRRSGFIEWGDNKEINPLEAYRNRLRTLADWVRRLLDRSKPPTRVFWRTTSPVHFE--GGD-WN-- 173 (263)
T ss_pred CCCEEEE-EcchhhhhcchhcccCCCcCcchHHHHHHHHHHHHHHHHhhhccccccceEEEEecCCcccc--ccc-cc--
Confidence 5788888 789888854211 00 01112233445566667777777776665 77888777654321 110 00
Q ss_pred CcccccCCcch-----hHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHHHH
Q 047993 81 DSAAYDQFHCL-----KCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAFMW 132 (210)
Q Consensus 81 ~~~~~~~~~~~-----~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~ 132 (210)
..+.|. ...+.....+|+.+.+.+ ..+.++.++|+.+.+..
T Consensus 174 -----~gg~c~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ldi~~~~~~ 219 (263)
T PF13839_consen 174 -----SGGSCNPPRREEITNEQIDELNEALREAL------KKNSRVHLLDIFTMLSS 219 (263)
T ss_pred -----cCCCcCcccccCCCHHHHHHHHHHHHHHh------hcCCCceeeeecchhhh
Confidence 011232 223455666666666544 14567889999544433
No 58
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=64.18 E-value=32 Score=25.34 Aligned_cols=52 Identities=19% Similarity=0.236 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCce
Q 047993 41 VQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVA 120 (210)
Q Consensus 41 v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~ 120 (210)
+..+.+.+++|.+.|+++|+|. |.+.... ..| ..|.+.+++++ +|..+
T Consensus 55 ~p~~~eaL~~l~~~G~~~V~V~--------Pl~l~~G---------------------~e~-~di~~~v~~~~--~~~~~ 102 (127)
T cd03412 55 VDTPEEALAKLAADGYTEVIVQ--------SLHIIPG---------------------EEY-EKLKREVDAFK--KGFKK 102 (127)
T ss_pred CCCHHHHHHHHHHCCCCEEEEE--------eCeeECc---------------------HHH-HHHHHHHHHHh--CCCce
Confidence 4667889999999999999996 4444321 113 56777777776 56666
Q ss_pred EEEe
Q 047993 121 IIYG 124 (210)
Q Consensus 121 i~~~ 124 (210)
|.+.
T Consensus 103 i~~g 106 (127)
T cd03412 103 IKLG 106 (127)
T ss_pred EEEc
Confidence 6665
No 59
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=59.03 E-value=24 Score=26.27 Aligned_cols=63 Identities=16% Similarity=0.099 Sum_probs=38.3
Q ss_pred HHHHHHHH-HcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhC
Q 047993 45 KDAVTRVI-DFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEH 116 (210)
Q Consensus 45 ~~~v~~L~-~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~ 116 (210)
...+..|+ +.-.-.++++++-- .+-.|..+.... .--.+..++++..||..|++.|.++++++
T Consensus 32 ~a~~s~~~~~~~~P~iV~FDmK~--Tld~F~~Q~~~~-------~lte~q~e~lt~rF~~aL~~~L~~yq~~H 95 (128)
T PRK13717 32 NAAVSYGIVRLNAPVTAAFNMKQ--TVDAFFDSASQK-------QLSEAQSKALSARFNTALEASLQAWQQKH 95 (128)
T ss_pred HHHHHHHHhhcCCCeEEEEehHH--HHHHHHHHHhcc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33455444 44567788887642 111222221110 01145678899999999999999999875
No 60
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. The sequence around that residue is highly conserved. This domain is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus and the PEP-utilizing enzyme mobile domain.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2HRO_A 2OLS_A 2DIK_A 2R82_A 1JDE_A 1DIK_A 1GGO_A 1KBL_A 1KC7_A 2BG5_B ....
Probab=51.79 E-value=39 Score=28.92 Aligned_cols=14 Identities=29% Similarity=0.256 Sum_probs=10.5
Q ss_pred eEEcccccchhhhhh
Q 047993 10 FIVGEIGENDYKYAL 24 (210)
Q Consensus 10 ~~i~~iG~ND~~~~~ 24 (210)
=++ +||+||+..+.
T Consensus 199 DF~-SIGtNDLtQy~ 212 (293)
T PF02896_consen 199 DFF-SIGTNDLTQYT 212 (293)
T ss_dssp SEE-EEEHHHHHHHH
T ss_pred CEE-EEChhHHHHHH
Confidence 356 79999997543
No 61
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=50.77 E-value=14 Score=24.80 Aligned_cols=21 Identities=19% Similarity=0.221 Sum_probs=16.1
Q ss_pred HHHHHHHHHHcCCcEEEEeCC
Q 047993 44 IKDAVTRVIDFGAVRVVVPGN 64 (210)
Q Consensus 44 ~~~~v~~L~~~Gar~~~v~nl 64 (210)
+.+.+.+|.++||+-|++..+
T Consensus 52 ~~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 52 VWDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHHcCCCEEEEEec
Confidence 556788999999999999754
No 62
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=50.69 E-value=40 Score=24.58 Aligned_cols=26 Identities=23% Similarity=0.226 Sum_probs=22.7
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHhhC
Q 047993 91 LKCLNNLSFHHNELLQQAIQELKNEH 116 (210)
Q Consensus 91 ~~~~~~~~~~~N~~L~~~l~~l~~~~ 116 (210)
.++.++++..||..|++.|.++++++
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H 82 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQH 82 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 35677899999999999999999876
No 63
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=50.25 E-value=65 Score=27.40 Aligned_cols=33 Identities=9% Similarity=0.117 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCCccc
Q 047993 104 LLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLEFDN 144 (210)
Q Consensus 104 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yGf~~ 144 (210)
.|.+.++.+.++-+|+.|...-. +||++||--.
T Consensus 114 ~l~~~~~~~~~~~~ga~i~~~~V--------~dP~rfGV~e 146 (286)
T COG1209 114 GLSELLEHFAEEGSGATILLYEV--------DDPSRYGVVE 146 (286)
T ss_pred ChHHHHHHHhccCCCcEEEEEEc--------CCcccceEEE
Confidence 57777777777777888877765 4999999544
No 64
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=47.60 E-value=26 Score=24.88 Aligned_cols=23 Identities=13% Similarity=0.265 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCC
Q 047993 42 QAIKDAVTRVIDFGAVRVVVPGN 64 (210)
Q Consensus 42 ~~~~~~v~~L~~~Gar~~~v~nl 64 (210)
+.+...+..|.++||+-|+|..+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 56778899999999999999753
No 65
>COG1015 DeoB Phosphopentomutase [Carbohydrate transport and metabolism]
Probab=43.27 E-value=67 Score=28.50 Aligned_cols=69 Identities=10% Similarity=0.053 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceE
Q 047993 42 QAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAI 121 (210)
Q Consensus 42 ~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i 121 (210)
+.+-..++.+-.++-.-|++.|+-+....=.-+ .-.....+..+.|.++|.+.++.|+.. +.-|
T Consensus 266 ~~~d~tl~~~~~~~~~~~vFtNlVdfD~~yGHR--------------rDv~gYa~aLe~FD~rL~e~~~~l~ed--DlLi 329 (397)
T COG1015 266 DGMDVTLEEMKTAEFNGLVFTNLVDFDSLYGHR--------------RDVAGYAAALEEFDRRLPELIENLRED--DLLI 329 (397)
T ss_pred HHHHHHHHHHhcCCCCcEEEEeeeecccccccc--------------cchHHHHHHHHHHHHHHHHHHHhcCCC--CEEE
Confidence 444445666666777789999998766321111 113445677899999999999988752 5656
Q ss_pred EEeeh
Q 047993 122 IYGDY 126 (210)
Q Consensus 122 ~~~D~ 126 (210)
+..|=
T Consensus 330 iTADH 334 (397)
T COG1015 330 ITADH 334 (397)
T ss_pred EecCC
Confidence 55554
No 66
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.16 E-value=38 Score=30.22 Aligned_cols=47 Identities=30% Similarity=0.533 Sum_probs=31.5
Q ss_pred HHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehh
Q 047993 50 RVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYY 127 (210)
Q Consensus 50 ~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 127 (210)
.+++.|+.+++- +-|.||.|.-... +.++.++++++|++++.-+|..
T Consensus 327 e~i~~g~~nvIc--lqPFGCmPnhI~~-----------------------------kgm~k~lk~~~p~ani~aVd~d 373 (420)
T COG3581 327 ELIESGVDNVIC--LQPFGCMPNHIVS-----------------------------KGMIKGLKRDKPKANIAAVDYD 373 (420)
T ss_pred HHHHcCCCceEE--ecCccCCcHHHHH-----------------------------HHHHHHHHhcCCCCceEEeecC
Confidence 466778888776 5689999944321 3445566777777777776654
No 67
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=40.99 E-value=1.1e+02 Score=24.05 Aligned_cols=29 Identities=17% Similarity=0.339 Sum_probs=20.8
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcEEEEeC
Q 047993 35 TLVPEVVQAIKDAVTRVIDFGAVRVVVPG 63 (210)
Q Consensus 35 ~~v~~~v~~~~~~v~~L~~~Gar~~~v~n 63 (210)
.-+..+-..|.+.|.+|++.|.+.|+.-+
T Consensus 22 ~~~~~ik~~L~~~i~~lie~G~~~fi~Gg 50 (177)
T PF06908_consen 22 PKIQVIKKALKKQIIELIEEGVRWFITGG 50 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT--EEEE--
T ss_pred hhHHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 34666778889999999999999888754
No 68
>TIGR01417 PTS_I_fam phosphoenolpyruvate-protein phosphotransferase. This model recognizes a distinct clade of phophoenolpyruvate (PEP)-dependent enzymes. Most members are known or deduced to function as the phosphoenolpyruvate-protein phosphotransferase (or enzyme I) of PTS sugar transport systems. However, some species with both a member of this family and a homolog of the phosphocarrier protein HPr lack a IIC component able to serve as a permease. An HPr homolog designated NPr has been implicated in the regulation of nitrogen assimilation, which demonstrates that not all phosphotransferase system components are associated directly with PTS transport.
Probab=40.54 E-value=71 Score=29.96 Aligned_cols=14 Identities=29% Similarity=0.330 Sum_probs=10.8
Q ss_pred eeEEcccccchhhhh
Q 047993 9 LFIVGEIGENDYKYA 23 (210)
Q Consensus 9 l~~i~~iG~ND~~~~ 23 (210)
+=++ +||.||+..+
T Consensus 445 vDf~-sIGtnDLsqy 458 (565)
T TIGR01417 445 VDFF-SIGTNDLTQY 458 (565)
T ss_pred CCEE-EEChhHHHHH
Confidence 4467 8999999754
No 69
>PF12872 OST-HTH: OST-HTH/LOTUS domain; PDB: 2KPM_A 3S93_B 3RCO_A 2KZV_A.
Probab=39.97 E-value=56 Score=21.05 Aligned_cols=25 Identities=8% Similarity=-0.013 Sum_probs=20.0
Q ss_pred eEEEeehhHHHHHHH--hCcCCCCccc
Q 047993 120 AIIYGDYYTAFMWIL--GHVRTLEFDN 144 (210)
Q Consensus 120 ~i~~~D~~~~~~~i~--~~p~~yGf~~ 144 (210)
.+.+.++...+.... =+|..|||..
T Consensus 23 ~v~ls~l~~~~~~~~~~f~~~~yG~~~ 49 (74)
T PF12872_consen 23 WVSLSQLGQEYKKKYPDFDPRDYGFSS 49 (74)
T ss_dssp SEEHHHHHHHHHHHHTT--TCCTTSSS
T ss_pred eEEHHHHHHHHHHHCCCCCccccCCCc
Confidence 688888888888887 4689999987
No 70
>COG1402 Uncharacterized protein, putative amidase [General function prediction only]
Probab=39.28 E-value=44 Score=27.92 Aligned_cols=25 Identities=12% Similarity=0.267 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEeC
Q 047993 39 EVVQAIKDAVTRVIDFGAVRVVVPG 63 (210)
Q Consensus 39 ~~v~~~~~~v~~L~~~Gar~~~v~n 63 (210)
..+.-+.+.++.|+..|.|||+++|
T Consensus 87 t~~~~~~~~~~Sl~~~Gfrk~v~vN 111 (250)
T COG1402 87 TLIALLVELVESLARHGFRKFVIVN 111 (250)
T ss_pred HHHHHHHHHHHHHHhcCccEEEEEe
Confidence 4456666778999999999999988
No 71
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=38.30 E-value=15 Score=27.80 Aligned_cols=17 Identities=18% Similarity=-0.025 Sum_probs=14.5
Q ss_pred HcCCcEEEEeCCCCCcc
Q 047993 53 DFGAVRVVVPGNFPVGC 69 (210)
Q Consensus 53 ~~Gar~~~v~nlp~lg~ 69 (210)
..|||.||.+|+|.+..
T Consensus 42 ~~GARdFVfwNipQiQy 58 (169)
T KOG4079|consen 42 QSGARDFVFWNIPQIQY 58 (169)
T ss_pred ccCccceEEecchhhcc
Confidence 57999999999998653
No 72
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=36.18 E-value=1.2e+02 Score=24.18 Aligned_cols=25 Identities=16% Similarity=0.076 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeCC
Q 047993 40 VVQAIKDAVTRVIDFGAVRVVVPGN 64 (210)
Q Consensus 40 ~v~~~~~~v~~L~~~Gar~~~v~nl 64 (210)
.-..+...++.|.+.|+++|.+..+
T Consensus 134 TG~Tl~~ai~~L~~~G~~~I~v~~l 158 (207)
T TIGR01091 134 TGGTMIAALDLLKKRGAKKIKVLSI 158 (207)
T ss_pred chHHHHHHHHHHHHcCCCEEEEEEE
Confidence 3456778899999999999988775
No 73
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=34.60 E-value=49 Score=23.49 Aligned_cols=19 Identities=16% Similarity=0.364 Sum_probs=15.9
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q 047993 44 IKDAVTRVIDFGAVRVVVP 62 (210)
Q Consensus 44 ~~~~v~~L~~~Gar~~~v~ 62 (210)
+.+.+++|.+.|+++|+|.
T Consensus 44 i~~~l~~l~~~G~~~i~lv 62 (103)
T cd03413 44 LDDVLAKLKKAGIKKVTLM 62 (103)
T ss_pred HHHHHHHHHHcCCCEEEEE
Confidence 5667888999999999884
No 74
>cd03415 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelatase (CbiX) single domain. Proteins in this subgroup contain a single CbiX domain N-terminal to a precorrin-8X methylmutase (CbiC) domain. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, while CbiC catalyzes the conversion of cobalt-precorrin 8 to cobyrinic acid by methyl rearrangement. Both CbiX and CbiC are involved in vitamin B12 biosynthesis.
Probab=33.37 E-value=50 Score=24.42 Aligned_cols=20 Identities=10% Similarity=0.323 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHcCCcEEEEe
Q 047993 43 AIKDAVTRVIDFGAVRVVVP 62 (210)
Q Consensus 43 ~~~~~v~~L~~~Gar~~~v~ 62 (210)
.+.+.|++|.+.|+++|+|+
T Consensus 45 ~l~~~l~~l~~~G~~~ivVv 64 (125)
T cd03415 45 NWRDLLNELLSEGYGHIIIA 64 (125)
T ss_pred CHHHHHHHHHHCCCCEEEEe
Confidence 36778999999999999996
No 75
>PRK13660 hypothetical protein; Provisional
Probab=33.25 E-value=2.5e+02 Score=22.28 Aligned_cols=27 Identities=22% Similarity=0.422 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeC
Q 047993 37 VPEVVQAIKDAVTRVIDFGAVRVVVPG 63 (210)
Q Consensus 37 v~~~v~~~~~~v~~L~~~Gar~~~v~n 63 (210)
+..+-..|.+.|.+|++.|.+.|++-+
T Consensus 24 ~~~IK~aL~~~l~~~~e~G~~wfi~gg 50 (182)
T PRK13660 24 IKYIKKAIKRKLIALLEEGLEWVIISG 50 (182)
T ss_pred hHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 445557788999999999999888754
No 76
>PRK11177 phosphoenolpyruvate-protein phosphotransferase; Provisional
Probab=32.92 E-value=1.1e+02 Score=28.85 Aligned_cols=15 Identities=27% Similarity=0.279 Sum_probs=11.1
Q ss_pred eeEEcccccchhhhhh
Q 047993 9 LFIVGEIGENDYKYAL 24 (210)
Q Consensus 9 l~~i~~iG~ND~~~~~ 24 (210)
+=++ +||.||+..+.
T Consensus 446 vDf~-sIGtnDL~qy~ 460 (575)
T PRK11177 446 VDFF-SIGTNDLTQYT 460 (575)
T ss_pred CCEE-EECcHHHHHHH
Confidence 3467 89999997643
No 77
>PF06812 ImpA-rel_N: ImpA-related N-terminal; InterPro: IPR010657 This entry represents a conserved region located towards the N-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=32.80 E-value=16 Score=23.28 Aligned_cols=8 Identities=38% Similarity=0.954 Sum_probs=6.9
Q ss_pred eecCCChh
Q 047993 182 SWDGVHLT 189 (210)
Q Consensus 182 fwD~~HPT 189 (210)
|||.+||.
T Consensus 53 ~W~~l~P~ 60 (62)
T PF06812_consen 53 YWDSLHPQ 60 (62)
T ss_pred CCcccCCC
Confidence 79999996
No 78
>PF09677 TrbI_Ftype: Type-F conjugative transfer system protein (TrbI_Ftype); InterPro: IPR014115 This entry represents TrbI, an essential component of the F-type conjugative transfer system for plasmid DNA transfer that has been shown to be localized to the periplasm [, ].
Probab=32.61 E-value=75 Score=23.04 Aligned_cols=25 Identities=20% Similarity=0.355 Sum_probs=21.6
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHhhC
Q 047993 92 KCLNNLSFHHNELLQQAIQELKNEH 116 (210)
Q Consensus 92 ~~~~~~~~~~N~~L~~~l~~l~~~~ 116 (210)
++.+..++.||+.|.+.|.++.+++
T Consensus 57 ~q~~a~t~~F~~aL~~~L~~~~~~h 81 (111)
T PF09677_consen 57 EQVEALTQRFMQALEASLAEYQAEH 81 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5567889999999999999998764
No 79
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=31.28 E-value=41 Score=25.13 Aligned_cols=24 Identities=21% Similarity=0.212 Sum_probs=18.1
Q ss_pred CCceeecCCChhHHHHHHHHHHHH
Q 047993 178 DKRISWDGVHLTQKANKYMAMWLI 201 (210)
Q Consensus 178 ~~y~fwD~~HPT~~~h~~~A~~~~ 201 (210)
+.|++-|.+||..+|+-.+-+.|.
T Consensus 101 ~~yfm~D~iHlgw~GWv~vd~~i~ 124 (130)
T PF04914_consen 101 EPYFMQDTIHLGWKGWVYVDQAIY 124 (130)
T ss_dssp STTSBSSSSSB-THHHHHHHHHHH
T ss_pred CCceeeecccCchhhHHHHHHHHH
Confidence 356777999999999987777664
No 80
>TIGR00175 mito_nad_idh isocitrate dehydrogenase, NAD-dependent, mitochondrial type. The NADP-dependent IDH of Thermus aquaticus thermophilus strain HB8 resembles these NAD-dependent IDH, except for the residues involved in cofactor specificity, much more closely than it resembles other prokaryotic NADP-dependent IDH, including that of Thermus aquaticus strain YT1.
Probab=31.23 E-value=83 Score=27.45 Aligned_cols=40 Identities=13% Similarity=0.194 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCC
Q 047993 102 NELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLE 141 (210)
Q Consensus 102 N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yG 141 (210)
-...++.+.++.++||++++-..=+.++...++.+|+.|.
T Consensus 179 ~glf~~~~~eva~~yp~v~~~~~~vDa~~~~lv~~P~~fd 218 (333)
T TIGR00175 179 DGLFLNVCREVAKEYPDITFESMIVDNTCMQLVSRPSQFD 218 (333)
T ss_pred HHHHHHHHHHHHHHCCCCeeeeeeHHHHHHHHhcCccccc
Confidence 3445555666677899988877777888899999999985
No 81
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=30.92 E-value=1.7e+02 Score=23.46 Aligned_cols=25 Identities=16% Similarity=-0.011 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeCC
Q 047993 40 VVQAIKDAVTRVIDFGAVRVVVPGN 64 (210)
Q Consensus 40 ~v~~~~~~v~~L~~~Gar~~~v~nl 64 (210)
.-..+...++.|.+.|+++|.+..+
T Consensus 136 TG~Tl~~ai~~L~~~G~~~I~~~~l 160 (209)
T PRK00129 136 TGGSAIAAIDLLKKRGAKNIKVLCL 160 (209)
T ss_pred chHHHHHHHHHHHHcCCCEEEEEEE
Confidence 3456778899999999999988775
No 82
>TIGR02089 TTC tartrate dehydrogenase. Tartrate dehydrogenase catalyzes the oxidation of both meso- and (+)-tartrate as well as a D-malate. These enzymes are closely related to the 3-isopropylmalate and isohomocitrate dehydrogenases found in TIGR00169 and TIGR02088, respectively.
Probab=30.26 E-value=87 Score=27.54 Aligned_cols=38 Identities=13% Similarity=0.082 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCC
Q 047993 104 LLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLE 141 (210)
Q Consensus 104 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yG 141 (210)
..++...++.++||++++-..=+......++.+|+.|.
T Consensus 199 lf~~~~~eva~~yp~v~~~~~~vD~~~~~lv~~P~~fD 236 (352)
T TIGR02089 199 FWDEVFAEVAAEYPDVEWDSYHIDALAARFVLKPETFD 236 (352)
T ss_pred HHHHHHHHHHhhCCCceEeeehHHHHHHHHhcChhhCc
Confidence 34555566778899988777777788899999999986
No 83
>PRK03437 3-isopropylmalate dehydrogenase; Provisional
Probab=30.19 E-value=84 Score=27.55 Aligned_cols=38 Identities=21% Similarity=0.419 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCC
Q 047993 104 LLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLE 141 (210)
Q Consensus 104 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yG 141 (210)
..++...+..++||++++-..=+..+...++.+|+.|.
T Consensus 196 lf~~~~~eva~~ypdV~~~~~~vDa~~~~Lv~~P~~fD 233 (344)
T PRK03437 196 LWQRTVDEVAAEYPDVTVDYQHVDAATIFMVTDPSRFD 233 (344)
T ss_pred HHHHHHHHHHhhCCCceEeehhHHHHHHHHhcCcccCc
Confidence 44555667778899988777777778889999999996
No 84
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=29.47 E-value=1.7e+02 Score=19.37 Aligned_cols=13 Identities=31% Similarity=0.008 Sum_probs=10.6
Q ss_pred HcCCcEEEEeCCC
Q 047993 53 DFGAVRVVVPGNF 65 (210)
Q Consensus 53 ~~Gar~~~v~nlp 65 (210)
=-|||.||++.+|
T Consensus 8 ~p~arSvIv~a~~ 20 (78)
T PF08331_consen 8 LPGARSVIVLAFP 20 (78)
T ss_pred CCCCcEEEEEEcc
Confidence 3589999999876
No 85
>PLN00123 isocitrate dehydrogenase (NAD+)
Probab=28.60 E-value=1.2e+02 Score=26.79 Aligned_cols=39 Identities=10% Similarity=0.127 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCC
Q 047993 103 ELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLE 141 (210)
Q Consensus 103 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yG 141 (210)
...++.+.++.++||++++-..=+..+...++.+|+.|.
T Consensus 203 glf~~~~~eva~eyPdV~~~~~~VDa~~~~Lv~~P~~fD 241 (360)
T PLN00123 203 GLFLESCREVAKKYPGIKYNEIIVDNCCMQLVSKPEQFD 241 (360)
T ss_pred hHHHHHHHHHHhhCCCceEeeeeHHHHHHHHhhCcccCc
Confidence 344555666777899988888778888999999999996
No 86
>cd03411 Ferrochelatase_N Ferrochelatase, N-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=28.52 E-value=69 Score=24.43 Aligned_cols=22 Identities=27% Similarity=0.363 Sum_probs=18.8
Q ss_pred HHHHHHHHHHcCCcEEEEeCCC
Q 047993 44 IKDAVTRVIDFGAVRVVVPGNF 65 (210)
Q Consensus 44 ~~~~v~~L~~~Gar~~~v~nlp 65 (210)
+.+.|+.|.+.|+++++|+-+-
T Consensus 101 i~~~l~~l~~~g~~~iivlPl~ 122 (159)
T cd03411 101 IEEALEELKADGVDRIVVLPLY 122 (159)
T ss_pred HHHHHHHHHHcCCCEEEEEECC
Confidence 6678999999999999997654
No 87
>COG3605 PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms]
Probab=28.37 E-value=36 Score=32.14 Aligned_cols=17 Identities=29% Similarity=0.395 Sum_probs=12.3
Q ss_pred CCeeEEcccccchhhhhh
Q 047993 7 SSLFIVGEIGENDYKYAL 24 (210)
Q Consensus 7 ~sl~~i~~iG~ND~~~~~ 24 (210)
+.+=+| ++|+||+..+.
T Consensus 618 ~~vDFv-SVGtNDL~Qyl 634 (756)
T COG3605 618 KRVDFV-SVGTNDLTQYL 634 (756)
T ss_pred hhCCEE-EecchHHHHHH
Confidence 344467 89999998654
No 88
>PF07394 DUF1501: Protein of unknown function (DUF1501); InterPro: IPR010869 This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.
Probab=27.93 E-value=1.4e+02 Score=26.28 Aligned_cols=62 Identities=19% Similarity=0.157 Sum_probs=44.2
Q ss_pred CeeEEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcC-CcEEEEeCCCCCcccCcccc
Q 047993 8 SLFIVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFG-AVRVVVPGNFPVGCFPIYLT 75 (210)
Q Consensus 8 sl~~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~G-ar~~~v~nlp~lg~~P~~~~ 75 (210)
.+|.| ..|+-|--..- .......+.++-+.|...++.|.+.| ..+++|+.+.+.|++|....
T Consensus 247 ~v~~V-~~gGwDTH~~~-----~~~~~~ll~~L~~alaaf~~dL~~~g~~d~t~vv~~SEFGRt~~~N~ 309 (392)
T PF07394_consen 247 RVVFV-SLGGWDTHSNQ-----GNRHARLLPELDQALAAFIQDLKERGLLDDTLVVTMSEFGRTPRENG 309 (392)
T ss_pred EEEEE-CCCCccCcccc-----HhHHHHHHHHHHHHHHHHHHHHHhcCCcCceEEEEeeecCCCcccCC
Confidence 46778 78876643211 11234455777777888888888888 47899999999999998654
No 89
>PRK00772 3-isopropylmalate dehydrogenase; Provisional
Probab=27.68 E-value=1.3e+02 Score=26.54 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCC
Q 047993 103 ELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLE 141 (210)
Q Consensus 103 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yG 141 (210)
...++...++.++||++.+-..=+..+...++.+|..|.
T Consensus 199 glf~~~~~eva~eyp~i~~~~~~vDa~~~~lv~~P~~fD 237 (358)
T PRK00772 199 RLWREVVTEVAKEYPDVELSHMYVDNAAMQLVRNPKQFD 237 (358)
T ss_pred hHHHHHHHHHHhHCCCceEEEEeHHHHHHHHhhCcccCe
Confidence 445566667778899988888888888999999999985
No 90
>PRK08997 isocitrate dehydrogenase; Provisional
Probab=27.28 E-value=1.4e+02 Score=26.12 Aligned_cols=38 Identities=11% Similarity=0.106 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCC
Q 047993 104 LLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLE 141 (210)
Q Consensus 104 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yG 141 (210)
..++...+..++||++++-..=+..+...++.+|+.|.
T Consensus 183 lf~~~~~eva~~yP~V~~~~~~vDa~~~~lv~~P~~fd 220 (334)
T PRK08997 183 LFLKVAREVALRYPDIEFEEMIVDATCMQLVMNPEQFD 220 (334)
T ss_pred HHHHHHHHHHhhCCCeEEEeeeHHHHHHHHhhCcccCc
Confidence 44455556677899988766666667789999999996
No 91
>PF14681 UPRTase: Uracil phosphoribosyltransferase; PDB: 1V9S_B 1UPF_A 1UPU_D 1JLR_B 1BD4_A 1BD3_C 1JLS_D 1XTV_C 1XTU_H 3G6W_C ....
Probab=27.23 E-value=1.9e+02 Score=23.17 Aligned_cols=47 Identities=13% Similarity=0.260 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHcCC--cEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCCc
Q 047993 42 QAIKDAVTRVIDFGA--VRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPNV 119 (210)
Q Consensus 42 ~~~~~~v~~L~~~Ga--r~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 119 (210)
..+...|+.|.+.|+ ++|+++++- . + ++.++++.+++|++
T Consensus 135 ~s~~~ai~~L~~~G~~~~~I~~v~~i------------a-----------s---------------~~Gl~~l~~~~P~v 176 (207)
T PF14681_consen 135 GSAIAAIEILKEHGVPEENIIIVSVI------------A-----------S---------------PEGLERLLKAFPDV 176 (207)
T ss_dssp HHHHHHHHHHHHTTG-GGEEEEEEEE------------E-----------E---------------HHHHHHHHHHSTTS
T ss_pred hhHHHHHHHHHHcCCCcceEEEEEEE------------e-----------c---------------HHHHHHHHHhCCCe
Confidence 456678899999887 799998751 0 1 34667777889999
Q ss_pred eEEEeeh
Q 047993 120 AIIYGDY 126 (210)
Q Consensus 120 ~i~~~D~ 126 (210)
+|+..-+
T Consensus 177 ~I~ta~i 183 (207)
T PF14681_consen 177 RIYTAAI 183 (207)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9877655
No 92
>TIGR00169 leuB 3-isopropylmalate dehydrogenase. This model will not find all isopropylmalate dehydrogenases; the enzyme from Sulfolobus sp. strain 7 is more similar to mitochondrial NAD-dependent isocitrate dehydrogenases than to other known isopropylmalate dehydrogenases and was omitted to improve the specificity of the model. It scores below the cutoff and below some enzymes known not to be isopropylmalate dehydrogenase.
Probab=27.07 E-value=1.4e+02 Score=26.23 Aligned_cols=39 Identities=18% Similarity=0.278 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCC
Q 047993 103 ELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLE 141 (210)
Q Consensus 103 ~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yG 141 (210)
...++..++..++||++++-..=+..+...++.+|+.|.
T Consensus 196 glf~~~~~eva~~yP~I~~~~~~vDa~~~~Lv~~P~~fD 234 (349)
T TIGR00169 196 RLWRKTVEEIAKEYPDVELEHQYIDNAAMQLVKSPTQFD 234 (349)
T ss_pred HHHHHHHHHHHhhCCCceEEeeeHHHHHHHHHhCccCce
Confidence 355556667777899988777777788889999999985
No 93
>PLN00118 isocitrate dehydrogenase (NAD+)
Probab=26.78 E-value=1.2e+02 Score=27.00 Aligned_cols=41 Identities=10% Similarity=0.140 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCC
Q 047993 101 HNELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLE 141 (210)
Q Consensus 101 ~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yG 141 (210)
.-...++.+.++.++||++++-..=+......++.+|+.|.
T Consensus 217 tdglf~e~~~eva~eyPdI~~~~~~VDa~a~~Lv~~P~~fD 257 (372)
T PLN00118 217 TDGLFLKCCREVAEKYPEIVYEEVIIDNCCMMLVKNPALFD 257 (372)
T ss_pred hhHHHHHHHHHHHhhCCCceEEeeeHHHHHHHhccCcccCc
Confidence 33455566667778899987777667777889999999985
No 94
>COG4053 Uncharacterized protein conserved in archaea [Function unknown]
Probab=26.37 E-value=3.4e+02 Score=21.90 Aligned_cols=28 Identities=0% Similarity=0.151 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEeCCC
Q 047993 38 PEVVQAIKDAVTRVIDFGAVRVVVPGNF 65 (210)
Q Consensus 38 ~~~v~~~~~~v~~L~~~Gar~~~v~nlp 65 (210)
+.+...+.+.|+.|.+.++-+..+.|+-
T Consensus 22 r~l~~~ve~~ik~ll~~~~~~a~l~nit 49 (244)
T COG4053 22 RKLNELVEKEIKKLLSKLGIKATLSNIT 49 (244)
T ss_pred HHHHHHHHHHHHHHHHhhcceeEecccc
Confidence 4566777888888888888888887764
No 95
>COG4531 ZnuA ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]
Probab=26.20 E-value=1.9e+02 Score=24.73 Aligned_cols=47 Identities=11% Similarity=0.055 Sum_probs=33.5
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHhhCCC----ceEEEeehhHHHHHHHhCcCCCCccc
Q 047993 92 KCLNNLSFHHNELLQQAIQELKNEHPN----VAIIYGDYYTAFMWILGHVRTLEFDN 144 (210)
Q Consensus 92 ~~~~~~~~~~N~~L~~~l~~l~~~~~~----~~i~~~D~~~~~~~i~~~p~~yGf~~ 144 (210)
..+.+-.+.||++|.+.-+++..++.- --|+|=|.|+.|++ .||.+.
T Consensus 180 a~y~aNlk~f~~~La~~d~~i~~~L~pvk~Kpf~VFHDAY~YFE~------~ygl~~ 230 (318)
T COG4531 180 AKYDANLKDFEAQLAALDKKVGEELAPVKGKPFFVFHDAYGYFEN------AYGLKP 230 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEechHHHHHH------hhCccc
Confidence 344556688999998887777666543 33788899999987 566554
No 96
>PRK14025 multifunctional 3-isopropylmalate dehydrogenase/D-malate dehydrogenase; Provisional
Probab=26.15 E-value=1.4e+02 Score=26.04 Aligned_cols=40 Identities=18% Similarity=0.263 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCC
Q 047993 102 NELLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLE 141 (210)
Q Consensus 102 N~~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yG 141 (210)
-...++...+..++||++.+-..=+..+...++.+|+.|.
T Consensus 178 ~glf~e~~~eva~~yp~i~~~~~~vDa~~~~lv~~P~~fD 217 (330)
T PRK14025 178 DGLFKKTFYEVAKEYPDIKAEDYYVDAMNMYIITRPQTFD 217 (330)
T ss_pred hHHHHHHHHHHHhhCCCeEEEeeeHHHHHHHHhcCcccCc
Confidence 3445556666777899977777777777889999999996
No 97
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=26.01 E-value=78 Score=23.57 Aligned_cols=19 Identities=32% Similarity=0.359 Sum_probs=15.7
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q 047993 44 IKDAVTRVIDFGAVRVVVP 62 (210)
Q Consensus 44 ~~~~v~~L~~~Gar~~~v~ 62 (210)
+.+.+++|.+.|+++|+|+
T Consensus 79 ~~~~l~~l~~~G~~~i~v~ 97 (135)
T cd00419 79 TDDALEELAKEGVKNVVVV 97 (135)
T ss_pred HHHHHHHHHHcCCCeEEEE
Confidence 3457788999999999996
No 98
>KOG0923 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification]
Probab=25.85 E-value=33 Score=32.92 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=25.1
Q ss_pred EEcccccchhhhhhhcCCchhhHhhhHHHHHHHHHHHHHHHHHcCCcE
Q 047993 11 IVGEIGENDYKYALFQGKTVEEVKTLVPEVVQAIKDAVTRVIDFGAVR 58 (210)
Q Consensus 11 ~i~~iG~ND~~~~~~~~~~~~~~~~~v~~~v~~~~~~v~~L~~~Gar~ 58 (210)
+. +.|+||++.+-+.+.+.. ..+..+++.||.+||-+
T Consensus 632 Lk-SLGI~Dl~~FdFmDpPp~----------etL~~aLE~LyaLGALn 668 (902)
T KOG0923|consen 632 LK-SLGIHDLIHFDFLDPPPT----------ETLLKALEQLYALGALN 668 (902)
T ss_pred HH-hcCcchhcccccCCCCCh----------HHHHHHHHHHHHhhccc
Confidence 44 789999986533443321 45667889999999843
No 99
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=25.52 E-value=1.1e+02 Score=26.86 Aligned_cols=37 Identities=11% Similarity=0.223 Sum_probs=29.1
Q ss_pred hHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcc
Q 047993 32 EVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGC 69 (210)
Q Consensus 32 ~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~ 69 (210)
+..+++.+++..+...++.|+++|+|.|=| +=|.+..
T Consensus 160 ~~~~~~~dlA~al~~Ei~~L~~aG~~~IQi-Dep~l~~ 196 (368)
T PRK06520 160 DLDDYFDDLAKTWRDAIKAFYDAGCRYLQL-DDTVWAY 196 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEe-cCcchhh
Confidence 346788999999999999999999998554 4555443
No 100
>COG0276 HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism]
Probab=25.31 E-value=2.4e+02 Score=24.54 Aligned_cols=23 Identities=35% Similarity=0.507 Sum_probs=18.2
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCC
Q 047993 44 IKDAVTRVIDFGAVRVVVPGNFP 66 (210)
Q Consensus 44 ~~~~v~~L~~~Gar~~~v~nlp~ 66 (210)
+.+.|+.|.+.|.++++++=+-|
T Consensus 104 i~~~v~~l~~~gv~~iv~~pLyP 126 (320)
T COG0276 104 IEEAVEELKKDGVERIVVLPLYP 126 (320)
T ss_pred HHHHHHHHHHcCCCeEEEEECCc
Confidence 45688899999999998876543
No 101
>COG1182 AcpD Acyl carrier protein phosphodiesterase [Lipid metabolism]
Probab=24.99 E-value=1e+02 Score=24.96 Aligned_cols=27 Identities=30% Similarity=0.452 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHhhCCCceEEEeehhH
Q 047993 102 NELLQQAIQELKNEHPNVAIIYGDYYT 128 (210)
Q Consensus 102 N~~L~~~l~~l~~~~~~~~i~~~D~~~ 128 (210)
++.....++++++++|+.+|+.-|++.
T Consensus 19 ~~l~~~Fi~~yk~~~P~dev~~~DL~~ 45 (202)
T COG1182 19 RKLADEFIETYKEKHPNDEVIERDLAA 45 (202)
T ss_pred HHHHHHHHHHHHHhCCCCeEEEeeccc
Confidence 555677788899999999999999874
No 102
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=24.64 E-value=88 Score=22.60 Aligned_cols=21 Identities=29% Similarity=0.537 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHcCCcEEEEe
Q 047993 42 QAIKDAVTRVIDFGAVRVVVP 62 (210)
Q Consensus 42 ~~~~~~v~~L~~~Gar~~~v~ 62 (210)
-.+.+.+++|.+.|+++++|.
T Consensus 46 P~l~~~l~~l~~~g~~~v~vv 66 (126)
T PRK00923 46 PTIPEALKKLIGTGADKIIVV 66 (126)
T ss_pred CCHHHHHHHHHHcCCCEEEEE
Confidence 347788999999999999885
No 103
>KOG0907 consensus Thioredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=24.03 E-value=1.1e+02 Score=21.90 Aligned_cols=30 Identities=13% Similarity=0.204 Sum_probs=23.4
Q ss_pred HHHHHHHHHHhhCCCceEEEeehhHHHHHHH
Q 047993 104 LLQQAIQELKNEHPNVAIIYGDYYTAFMWIL 134 (210)
Q Consensus 104 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~ 134 (210)
.+.-.+.+|..+||++.++-+|... ..++.
T Consensus 38 ~i~P~~~~La~~y~~v~Flkvdvde-~~~~~ 67 (106)
T KOG0907|consen 38 AIAPKFEKLAEKYPDVVFLKVDVDE-LEEVA 67 (106)
T ss_pred hhhhHHHHHHHHCCCCEEEEEeccc-CHhHH
Confidence 4455788899999999999999997 44433
No 104
>PRK06233 hypothetical protein; Provisional
Probab=23.47 E-value=1.3e+02 Score=26.48 Aligned_cols=35 Identities=17% Similarity=0.291 Sum_probs=28.2
Q ss_pred HhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCc
Q 047993 33 VKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVG 68 (210)
Q Consensus 33 ~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg 68 (210)
..+++.+++..+...++.|+++|+|.|=| +=|.++
T Consensus 162 ~eel~~dlA~a~~~Ei~~L~~aG~~~IQi-DeP~~~ 196 (372)
T PRK06233 162 WDDYLDDLAQAYHDTIQHFYDLGARYIQL-DDTTWA 196 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEE-cCCCHH
Confidence 46788999999999999999999997655 445443
No 105
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=23.44 E-value=99 Score=20.99 Aligned_cols=19 Identities=26% Similarity=0.431 Sum_probs=16.0
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q 047993 44 IKDAVTRVIDFGAVRVVVP 62 (210)
Q Consensus 44 ~~~~v~~L~~~Gar~~~v~ 62 (210)
+.+.++.|.+.|.++++|+
T Consensus 47 i~~~l~~l~~~g~~~vvvv 65 (101)
T cd03409 47 TEEAIRELAEEGYQRVVIV 65 (101)
T ss_pred HHHHHHHHHHcCCCeEEEE
Confidence 5567888999999999886
No 106
>PF00180 Iso_dh: Isocitrate/isopropylmalate dehydrogenase; InterPro: IPR024084 Isocitrate dehydrogenase (IDH) [, ] is an important enzyme of carbohydrate metabolism which catalyses the oxidative decarboxylation of isocitrate into alpha-ketoglutarate. IDH is either dependent on NAD+ (1.1.1.41 from EC) or on NADP+ (1.1.1.42 from EC). In eukaryotes there are at least three isozymes of IDH: two are located in the mitochondrial matrix (one NAD+-dependent, the other NADP+-dependent), while the third one (also NADP+-dependent) is cytoplasmic. In Escherichia coli the activity of a NADP+-dependent form of the enzyme is controlled by the phosphorylation of a serine residue; the phosphorylated form of IDH is completely inactivated. 3-isopropylmalate dehydrogenase (1.1.1.85 from EC) (IMDH) [, ] catalyses the third step in the biosynthesis of leucine in bacteria and fungi, the oxidative decarboxylation of 3-isopropylmalate into 2-oxo-4-methylvalerate. Tartrate dehydrogenase (1.1.1.93 from EC) [] catalyses the reduction of tartrate to oxaloglycolate. These enzymes are evolutionary related. To this family also belongs the enzyme tartrate dehydrogenase, which shows strong homology to prokaryotic isopropylmalate dehydrogenases and, to a lesser extent, isocitrate dehydrogenase []. This entry represents a structural domain found in all types of isocitrate dehydrogenase, and in isopropylmalate dehydrogenase and tartrate dehydrogenase. The crystal structure of Escherichia coli isopropylmalate dehydrogenase has been described []. ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 1WAL_A 1CNZ_B 2D4V_C 1CM7_A 4AOY_D 3FMX_X 3FLK_C 1A05_A 1X0L_B 4F7I_D ....
Probab=23.37 E-value=1.4e+02 Score=26.21 Aligned_cols=38 Identities=18% Similarity=0.266 Sum_probs=30.8
Q ss_pred HHHHHHHHHHh-hCCCceEEEeehhHHHHHHHhCcCCCC
Q 047993 104 LLQQAIQELKN-EHPNVAIIYGDYYTAFMWILGHVRTLE 141 (210)
Q Consensus 104 ~L~~~l~~l~~-~~~~~~i~~~D~~~~~~~i~~~p~~yG 141 (210)
.+++...++.+ +||++.+-..-+..+...++.+|+.|+
T Consensus 195 lf~~~~~eva~~~yp~I~~~~~~vD~~~~~Lv~~P~~fd 233 (348)
T PF00180_consen 195 LFREVFQEVAKQEYPDIEVEHMLVDAAAMQLVKNPEQFD 233 (348)
T ss_dssp HHHHHHHHHHHHTHTTSEEEEEEHHHHHHHHHHSGGGES
T ss_pred HHHHHHHHHHHhhcceeEeeeeechhhhheeecCCccee
Confidence 44555555555 789999988888999999999999986
No 107
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=23.21 E-value=1.5e+02 Score=23.89 Aligned_cols=37 Identities=14% Similarity=0.246 Sum_probs=29.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhCCCceEEEeehhHHH
Q 047993 94 LNNLSFHHNELLQQAIQELKNEHPNVAIIYGDYYTAF 130 (210)
Q Consensus 94 ~~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~~~~ 130 (210)
.......|-+.|++.++++++..|+++|++.-.+.++
T Consensus 122 ~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~ 158 (259)
T cd01823 122 RDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLF 158 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecccccc
Confidence 3445678888999999999988899999888866554
No 108
>cd03311 CIMS_C_terminal_like CIMS - Cobalamine-independent methonine synthase, or MetE, C-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers the C-terminal barrel, and a few single-barrel sequences most similar to the C-terminal barrel. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Sidechains from
Probab=22.70 E-value=3.4e+02 Score=23.10 Aligned_cols=37 Identities=11% Similarity=0.187 Sum_probs=28.9
Q ss_pred hHhhhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcc
Q 047993 32 EVKTLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGC 69 (210)
Q Consensus 32 ~~~~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~ 69 (210)
+..+++.+++..+...++.|+++|++ ++-++=|.+..
T Consensus 145 ~~~el~~~la~~~~~e~~~l~~aG~~-~iQiDEP~l~~ 181 (332)
T cd03311 145 SREELAMDLALALREEIRDLYDAGCR-YIQIDEPALAE 181 (332)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCC-EEEeecchhhc
Confidence 34578899999999999999999995 56666555443
No 109
>PRK08194 tartrate dehydrogenase; Provisional
Probab=22.62 E-value=1.3e+02 Score=26.44 Aligned_cols=38 Identities=8% Similarity=0.177 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhhCCCceEEEeehhHHHHHHHhCcCCCC
Q 047993 104 LLQQAIQELKNEHPNVAIIYGDYYTAFMWILGHVRTLE 141 (210)
Q Consensus 104 ~L~~~l~~l~~~~~~~~i~~~D~~~~~~~i~~~p~~yG 141 (210)
..++...++.++||++.+-..=+......++.+|+.|.
T Consensus 196 lf~~~~~eva~~yp~V~~~~~~vDa~~~~Lv~~P~~fD 233 (352)
T PRK08194 196 FWDEVFQEVGKDYPEIETDSQHIDALAAFFVTRPEEFD 233 (352)
T ss_pred HHHHHHHHHHhhCCCceeeehhHHHHHHHHhhChhhCc
Confidence 44455556777899988777777778889999999996
No 110
>COG0648 Nfo Endonuclease IV [DNA replication, recombination, and repair]
Probab=22.19 E-value=4.2e+02 Score=22.56 Aligned_cols=53 Identities=25% Similarity=0.246 Sum_probs=38.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHH
Q 047993 35 TLVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQ 106 (210)
Q Consensus 35 ~~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~ 106 (210)
+.++..++.+.+.+++...+|++.+++- |.+... .+-.+.++.+++..|+.+.
T Consensus 80 e~~ekS~~~l~~e~~r~~~lG~~~lv~H--------pG~~~~-----------~~~e~~l~~i~~~Ln~~~~ 132 (280)
T COG0648 80 EKVEKSIERLIDEIDRCEQLGAKLLVFH--------PGSYLG-----------QGKEEGLNRIAEALNELLE 132 (280)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcEEEEC--------CccccC-----------CCHHHHHHHHHHHHHHHhh
Confidence 5678899999999999999999987763 444321 1123456777888887776
No 111
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=22.17 E-value=2.2e+02 Score=21.87 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhCCCceEEEeehh
Q 047993 95 NNLSFHHNELLQQAIQELKNEHPNVAIIYGDYY 127 (210)
Q Consensus 95 ~~~~~~~N~~L~~~l~~l~~~~~~~~i~~~D~~ 127 (210)
......|=+.|+++++.++++.|+++|+++-++
T Consensus 98 ~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~ 130 (204)
T cd04506 98 KKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLY 130 (204)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecC
Confidence 334567888999999999998899998888654
No 112
>cd02957 Phd_like Phosducin (Phd)-like family; composed of Phd and Phd-like proteins (PhLP), characterized as cytosolic regulators of G protein functions. Phd and PhLPs specifically bind G protein betagamma (Gbg)-subunits with high affinity, resulting in the solubilization of Gbg from the plasma membrane and impeding G protein-mediated signal transduction by inhibiting the formation of a functional G protein trimer (G protein alphabetagamma). Phd also inhibits the GTPase activity of G protein alpha. Phd can be phosphorylated by protein kinase A and G protein-coupled receptor kinase 2, leading to its inactivation. Phd was originally isolated from the retina, where it is highly expressed and has been implicated to play an important role in light adaptation. It is also found in the pineal gland, liver, spleen, striated muscle and the brain. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-te
Probab=22.06 E-value=2e+02 Score=20.07 Aligned_cols=26 Identities=19% Similarity=0.295 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhhCCCceEEEeehhHH
Q 047993 104 LLQQAIQELKNEHPNVAIIYGDYYTA 129 (210)
Q Consensus 104 ~L~~~l~~l~~~~~~~~i~~~D~~~~ 129 (210)
.+...++++.+++++.++..+|....
T Consensus 41 ~l~~~l~~la~~~~~v~f~~vd~~~~ 66 (113)
T cd02957 41 ILDSHLEELAAKYPETKFVKINAEKA 66 (113)
T ss_pred HHHHHHHHHHHHCCCcEEEEEEchhh
Confidence 34555666667788899999999865
No 113
>PLN02541 uracil phosphoribosyltransferase
Probab=21.96 E-value=1.7e+02 Score=24.38 Aligned_cols=50 Identities=18% Similarity=0.257 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHcCCc--EEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhhCCC
Q 047993 41 VQAIKDAVTRVIDFGAV--RVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNEHPN 118 (210)
Q Consensus 41 v~~~~~~v~~L~~~Gar--~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~ 118 (210)
-..+..+++.|.+.|++ +|.++++- . | ++.|+.+.+++|+
T Consensus 170 GgS~~~ai~~L~~~Gv~~~~I~~v~~i------------a-----------s---------------~~Gl~~i~~~fP~ 211 (244)
T PLN02541 170 GGTIVAAIDELVSRGASVEQIRVVCAV------------A-----------A---------------PPALKKLSEKFPG 211 (244)
T ss_pred hHHHHHHHHHHHHcCCCcccEEEEEEE------------E-----------C---------------HHHHHHHHHHCcC
Confidence 45677888999999997 88888751 0 1 3556667778999
Q ss_pred ceEEEeehhH
Q 047993 119 VAIIYGDYYT 128 (210)
Q Consensus 119 ~~i~~~D~~~ 128 (210)
++|+..-+..
T Consensus 212 v~I~ta~ID~ 221 (244)
T PLN02541 212 LHVYAGIIDE 221 (244)
T ss_pred CEEEEEEECc
Confidence 9988877653
No 114
>PF11965 DUF3479: Domain of unknown function (DUF3479); InterPro: IPR022571 This functionally uncharacterised domain, found N-terminal to PF02514 from PFAM, occurs in magnesium chelatase subunit H, which is involved in chlorophyll biosynthesis. It is found in bacteria, green plants and archaea. It is around 160 amino acids in length.; GO: 0016851 magnesium chelatase activity
Probab=21.81 E-value=1.7e+02 Score=22.86 Aligned_cols=31 Identities=19% Similarity=0.145 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHhh-CCCceEEEeehhHH
Q 047993 99 FHHNELLQQAIQELKNE-HPNVAIIYGDYYTA 129 (210)
Q Consensus 99 ~~~N~~L~~~l~~l~~~-~~~~~i~~~D~~~~ 129 (210)
.+||..|.+....++++ .||..+.++....+
T Consensus 10 ~~~~~al~~aa~~l~~~~~p~l~l~~~~~~el 41 (164)
T PF11965_consen 10 EHYNSALYRAAARLNRDHCPGLELSVFAAAEL 41 (164)
T ss_pred hhhhHHHHHHHHHHhhccCCCeEEEEEeHHHh
Confidence 46888899999888877 78999888887654
No 115
>PF11100 TrbE: Conjugal transfer protein TrbE ; InterPro: IPR020150 TrbE is encoded by the F-plasmid and is located between traN and traF. The product of trbE is a small, integral, inner membrane protein. Mutation of trbE by insertional mutagenesis suggests that TrbE is not essential for F transfer from Escherichia coli (strain K12) under standard mating conditions [].
Probab=21.79 E-value=78 Score=20.55 Aligned_cols=26 Identities=27% Similarity=0.356 Sum_probs=20.8
Q ss_pred CCCCceeecCCChhHHHHHHHHHHHH
Q 047993 176 NLDKRISWDGVHLTQKANKYMAMWLI 201 (210)
Q Consensus 176 ~~~~y~fwD~~HPT~~~h~~~A~~~~ 201 (210)
.|-=|+.||.+--|++..-+.|-.++
T Consensus 17 SPvIywSWDaVk~Tt~~d~l~a~~~I 42 (66)
T PF11100_consen 17 SPVIYWSWDAVKETTASDILEAVFFI 42 (66)
T ss_pred cceEEEEeccccccchhhHHHHHHHH
Confidence 36679999999999998877776554
No 116
>PF07555 NAGidase: beta-N-acetylglucosaminidase ; InterPro: IPR011496 This family consists of both eukaryotic and prokaryotic hyaluronidases. Human Q9HAR0 from SWISSPROT is expressed during meningioma []. Clostridium perfringens, P26831 from SWISSPROT, is involved in pathogenesis and is likely to act on connectivity tissue during gas gangrene []. It catalyses the random hydrolysis of 1->4-linkages between N-acetyl-beta-D-glucosamine and D-glucuronate residues in hyaluronate.; PDB: 2WB5_B 2V5C_B 2VUR_A 2V5D_A 2YDS_A 2CBI_A 2XPK_A 2CBJ_B 2J62_A 2X0Y_A ....
Probab=21.69 E-value=1.1e+02 Score=26.26 Aligned_cols=25 Identities=20% Similarity=0.329 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEe
Q 047993 38 PEVVQAIKDAVTRVIDFGAVRVVVP 62 (210)
Q Consensus 38 ~~~v~~~~~~v~~L~~~Gar~~~v~ 62 (210)
++-++.+.+-++.|+++|+|.|.|+
T Consensus 87 ~~d~~~L~~K~~ql~~lGvr~Fail 111 (306)
T PF07555_consen 87 EEDFEALKAKFDQLYDLGVRSFAIL 111 (306)
T ss_dssp HHHHHHHHHHHHHHHCTT--EEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 4566778888999999999999776
No 117
>PF14242 DUF4342: Domain of unknown function (DUF4342)
Probab=21.35 E-value=1.2e+02 Score=20.80 Aligned_cols=25 Identities=16% Similarity=0.345 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHcC-CcEEEEeC
Q 047993 39 EVVQAIKDAVTRVIDFG-AVRVVVPG 63 (210)
Q Consensus 39 ~~v~~~~~~v~~L~~~G-ar~~~v~n 63 (210)
..-+++.+.++.|++.| ++||+|-.
T Consensus 13 ~~g~~~~~~iK~li~kGNv~Ri~Ikk 38 (84)
T PF14242_consen 13 VKGEELVDKIKELIKKGNVTRIIIKK 38 (84)
T ss_pred ecHHHHHHHHHHHHHhcCeEEEEEEc
Confidence 34567778889999888 78888754
No 118
>PRK10128 2-keto-3-deoxy-L-rhamnonate aldolase; Provisional
Probab=21.13 E-value=3e+02 Score=23.10 Aligned_cols=17 Identities=29% Similarity=0.225 Sum_probs=12.9
Q ss_pred CCeeEEcccccchhhhhh
Q 047993 7 SSLFIVGEIGENDYKYAL 24 (210)
Q Consensus 7 ~sl~~i~~iG~ND~~~~~ 24 (210)
..+-.+ ++|.+|+-...
T Consensus 168 ~gvd~i-~~G~~Dls~sl 184 (267)
T PRK10128 168 EGIDGV-FIGPADLSASL 184 (267)
T ss_pred CCCCEE-EECHHHHHHHc
Confidence 346678 89999997654
No 119
>cd02989 Phd_like_TxnDC9 Phosducin (Phd)-like family, Thioredoxin (TRX) domain containing protein 9 (TxnDC9) subfamily; composed of predominantly uncharacterized eukaryotic proteins, containing a TRX-like domain without the redox active CXXC motif. The gene name for the human protein is TxnDC9. The two characterized members are described as Phd-like proteins, PLP1 of Saccharomyces cerevisiae and PhLP3 of Dictyostelium discoideum. Gene disruption experiments show that both PLP1 and PhLP3 are non-essential proteins. Unlike Phd and most Phd-like proteins, members of this group do not contain the Phd N-terminal helical domain which is implicated in binding to the G protein betagamma subunit.
Probab=20.96 E-value=1.4e+02 Score=21.25 Aligned_cols=27 Identities=15% Similarity=0.180 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhhCCCceEEEeehhHHH
Q 047993 104 LLQQAIQELKNEHPNVAIIYGDYYTAF 130 (210)
Q Consensus 104 ~L~~~l~~l~~~~~~~~i~~~D~~~~~ 130 (210)
.+...++++.+++|+.+++.+|....-
T Consensus 39 ~~~p~l~~la~~~~~i~f~~Vd~~~~~ 65 (113)
T cd02989 39 IMDKHLEILAKKHLETKFIKVNAEKAP 65 (113)
T ss_pred HHHHHHHHHHHHcCCCEEEEEEcccCH
Confidence 344555666667889999999998743
No 120
>PRK05481 lipoyl synthase; Provisional
Probab=20.63 E-value=5.2e+02 Score=21.79 Aligned_cols=23 Identities=17% Similarity=0.192 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeC
Q 047993 41 VQAIKDAVTRVIDFGAVRVVVPG 63 (210)
Q Consensus 41 v~~~~~~v~~L~~~Gar~~~v~n 63 (210)
.+.+.+.++.+.+.|+|.|++.+
T Consensus 82 ~eeI~~ea~~l~~~G~kEI~L~g 104 (289)
T PRK05481 82 PDEPERVAEAVARMGLKYVVITS 104 (289)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEE
Confidence 56667778888899999998885
No 121
>PF05141 DIT1_PvcA: Pyoverdine/dityrosine biosynthesis protein; InterPro: IPR007817 This entry is found in DIT1, a protein is involved in the synthesis of dityrosine []. Dityrosine is a sporulation-specific component of the Saccharomyces cerevisiae ascospore wall that is essential for the resistance of the spores to adverse environmental conditions. Q9I1L5 from SWISSPROT is involved in the biosynthesis of pyoverdine [].; PDB: 3E59_C.
Probab=20.54 E-value=1.8e+02 Score=24.72 Aligned_cols=70 Identities=17% Similarity=0.139 Sum_probs=45.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCcccCcccccccCCCcccccCCcchhHhhHHHHHHHHHHHHHHHHHHhh
Q 047993 36 LVPEVVQAIKDAVTRVIDFGAVRVVVPGNFPVGCFPIYLTQFRTNDSAAYDQFHCLKCLNNLSFHHNELLQQAIQELKNE 115 (210)
Q Consensus 36 ~v~~~v~~~~~~v~~L~~~Gar~~~v~nlp~lg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~L~~~l~~l~~~ 115 (210)
..=.-+..+.+.|+.+|.-||+-.++.+ |.+ + ..|...-...+..|.+.|++++.++.-
T Consensus 40 laL~~L~~lc~~I~~vY~PGa~v~I~SD----G~V------f----------~DllgV~D~~v~~Y~~~Lr~l~~~~~~- 98 (278)
T PF05141_consen 40 LALRRLNGLCQAIEAVYPPGAKVTIISD----GHV------F----------NDLLGVPDEEVWAYGEALRELAEEKGL- 98 (278)
T ss_dssp HHHHHHHHHHHHHHHHSTT-EEEEEE------HHH------H----------GGGTT--HHHHHHHHHHHHHHHHHCT--
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEEEEec----CcE------e----------ccccCCCHHHHHHHHHHHHHHHHhcCC-
Confidence 3334578888999999999998777654 111 1 135555667889999999999886642
Q ss_pred CCCceEEEeehhHH
Q 047993 116 HPNVAIIYGDYYTA 129 (210)
Q Consensus 116 ~~~~~i~~~D~~~~ 129 (210)
..|.++++..+
T Consensus 99 ---~~I~f~~l~dl 109 (278)
T PF05141_consen 99 ---DHIKFFRLEDL 109 (278)
T ss_dssp ---TTEEEE-GGG-
T ss_pred ---CeEEEeCHHHh
Confidence 23889998888
No 122
>TIGR01418 PEP_synth phosphoenolpyruvate synthase. Also called pyruvate,water dikinase and PEP synthase. The member from Methanococcus jannaschii contains a large intein. This enzyme generates phosphoenolpyruvate (PEP) from pyruvate, hydrolyzing ATP to AMP and releasing inorganic phosphate in the process. The enzyme shows extensive homology to other enzymes that use PEP as substrate or product. This enzyme may provide PEP for gluconeogenesis, for PTS-type carbohydrate transport systems, or for other processes.
Probab=20.50 E-value=2.5e+02 Score=27.50 Aligned_cols=13 Identities=31% Similarity=0.202 Sum_probs=10.2
Q ss_pred eEEcccccchhhhh
Q 047993 10 FIVGEIGENDYKYA 23 (210)
Q Consensus 10 ~~i~~iG~ND~~~~ 23 (210)
=+| +||.||+..+
T Consensus 686 Dfi-sIGtnDLtq~ 698 (782)
T TIGR01418 686 DGF-SIGSNDLTQL 698 (782)
T ss_pred CEE-EECchHHHHH
Confidence 367 8999999853
Done!