BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047994
(101 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255584403|ref|XP_002532934.1| conserved hypothetical protein [Ricinus communis]
gi|223527298|gb|EEF29450.1| conserved hypothetical protein [Ricinus communis]
Length = 235
Score = 117 bits (293), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 79/144 (54%), Gaps = 43/144 (29%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILD----------------------------- 31
MVF+SNPLSL+VPDPAFESWLRDS YLE+LD
Sbjct: 1 MVFSSNPLSLSVPDPAFESWLRDSGYLELLDHRSSSTAATSTPTTASTSNSTTATAATIT 60
Query: 32 -------------TATTTSATAVTTASTKE-TATTPSWTREFIGALRSYSFPSSPHTLKL 77
+ + ++ +T + + TPSWTR F G SYSFPS+ +L
Sbjct: 61 GGFFISLFSHFITLISLFTLNPLSKLTTDDFSGQTPSWTRVFFGDFGSYSFPSNADQARL 120
Query: 78 RVHENVKRYARNYASLFILFFACS 101
RVHENVKRYARNYASLFILFFAC+
Sbjct: 121 RVHENVKRYARNYASLFILFFACT 144
>gi|356549695|ref|XP_003543227.1| PREDICTED: PRA1 family protein H-like [Glycine max]
Length = 222
Score = 115 bits (287), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 79/129 (61%), Gaps = 28/129 (21%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTATTTSATAVTT----------------- 43
MVF+SNPLSL+VP+PAFESWLRD+ +LE+LD T++SA A +
Sbjct: 1 MVFSSNPLSLSVPEPAFESWLRDTGFLEVLDHRTSSSAAAASPAPSSAASTLFSRLLTFL 60
Query: 44 -----------ASTKETATTPSWTREFIGALRSYSFPSSPHTLKLRVHENVKRYARNYAS 92
A+ A TPSW+R F SYSFPSSP +LRV ENVKRYARNYA
Sbjct: 61 SLFTLNAFAKLAADDFAADTPSWSRSFFAFSDSYSFPSSPSQARLRVQENVKRYARNYAY 120
Query: 93 LFILFFACS 101
LFI+FFAC+
Sbjct: 121 LFIVFFACT 129
>gi|449456631|ref|XP_004146052.1| PREDICTED: PRA1 family protein H-like isoform 1 [Cucumis sativus]
gi|449456633|ref|XP_004146053.1| PREDICTED: PRA1 family protein H-like isoform 2 [Cucumis sativus]
Length = 235
Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 77/142 (54%), Gaps = 41/142 (28%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTATT----------------TSATAVTTA 44
M F+SNPLSL+VPD AF+SWLRDS YLEILD T+ T+A + T
Sbjct: 1 MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60
Query: 45 -------------------------STKETATTPSWTREFIGALRSYSFPSSPHTLKLRV 79
+ + TPSWT F+G SYSFPSSP +LRV
Sbjct: 61 FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFVGFFESYSFPSSPAQARLRV 120
Query: 80 HENVKRYARNYASLFILFFACS 101
HEN KRYARNYASLF+LFF C+
Sbjct: 121 HENAKRYARNYASLFVLFFVCT 142
>gi|449507067|ref|XP_004162924.1| PREDICTED: PRA1 family protein H-like isoform 1 [Cucumis sativus]
gi|449507071|ref|XP_004162925.1| PREDICTED: PRA1 family protein H-like isoform 2 [Cucumis sativus]
Length = 235
Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 77/142 (54%), Gaps = 41/142 (28%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTATT----------------TSATAVTTA 44
M F+SNPLSL+VPD AF+SWLRDS YLEILD T+ T+A + T
Sbjct: 1 MSFSSNPLSLSVPDAAFDSWLRDSGYLEILDQRTSDLHRHSSAAPPARPTPTAAAPLATG 60
Query: 45 -------------------------STKETATTPSWTREFIGALRSYSFPSSPHTLKLRV 79
+ + TPSWT F+G SYSFPSSP +LRV
Sbjct: 61 FFISLFSRIATLLSIFTLNPFAKLSAADFSGPTPSWTTGFLGFFESYSFPSSPAQARLRV 120
Query: 80 HENVKRYARNYASLFILFFACS 101
HEN KRYARNYASLF+LFF C+
Sbjct: 121 HENAKRYARNYASLFVLFFVCT 142
>gi|224128244|ref|XP_002329116.1| predicted protein [Populus trichocarpa]
gi|222869785|gb|EEF06916.1| predicted protein [Populus trichocarpa]
Length = 232
Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 76/141 (53%), Gaps = 40/141 (28%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTATTTSATAVTTASTKE------------ 48
MVF+SNPLSL+VPD F+SWLRDS YLEILD +++SA A ++
Sbjct: 1 MVFSSNPLSLSVPDTTFDSWLRDSGYLEILDQHSSSSAAAAPATTSTITSTTTTATATGL 60
Query: 49 ----------------------------TATTPSWTREFIGALRSYSFPSSPHTLKLRVH 80
+ TPSWTR F SYSFPS +LRV+
Sbjct: 61 FISFFSHILTLLSLFTLNPFSKLTTDDFSGQTPSWTRSFFADCGSYSFPSGSDQARLRVN 120
Query: 81 ENVKRYARNYASLFILFFACS 101
ENVKRYARNYASLFILFFAC+
Sbjct: 121 ENVKRYARNYASLFILFFACT 141
>gi|224114888|ref|XP_002316885.1| predicted protein [Populus trichocarpa]
gi|222859950|gb|EEE97497.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 73/138 (52%), Gaps = 37/138 (26%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDT---------------------------- 32
MVF+SNPLSL+VPDP F++WLRDS YLEILD
Sbjct: 1 MVFSSNPLSLSVPDPTFDTWLRDSGYLEILDQHSSAAAAPSTTTTSTTTTTTTATGLFIS 60
Query: 33 ----ATTTSATAVTTASTKET-----ATTPSWTREFIGALRSYSFPSSPHTLKLRVHENV 83
A T + +K T TPSWTR F RSYSFPS +LRV+ENV
Sbjct: 61 FFSHALTLLSLFTLNPFSKLTTDDFSGPTPSWTRSFFADHRSYSFPSGFGQARLRVNENV 120
Query: 84 KRYARNYASLFILFFACS 101
KRYARNYA LF+LFF C+
Sbjct: 121 KRYARNYAFLFVLFFVCT 138
>gi|297799228|ref|XP_002867498.1| hypothetical protein ARALYDRAFT_492039 [Arabidopsis lyrata subsp.
lyrata]
gi|297313334|gb|EFH43757.1| hypothetical protein ARALYDRAFT_492039 [Arabidopsis lyrata subsp.
lyrata]
Length = 241
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 75/150 (50%), Gaps = 49/150 (32%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTAT-------------------------- 34
M F+ NPLSL+VPDPAFESWLRDS YLE+LD T
Sbjct: 1 MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTSAAAAAASSSASVSSSAAATSAASDD 60
Query: 35 ------------------TTSATAVTTASTKETAT-----TPSWTREFIGALRSYSFPSS 71
T S+ +K +A TP WT F G SYSFPSS
Sbjct: 61 VVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTPPWTTGFFGNCDSYSFPSS 120
Query: 72 PHTLKLRVHENVKRYARNYASLFILFFACS 101
++RVHEN+KR+ARNYA+LFI+FFAC+
Sbjct: 121 SQQARMRVHENIKRFARNYATLFIVFFACA 150
>gi|18417012|ref|NP_567776.1| PRA1-like protein H [Arabidopsis thaliana]
gi|75155917|sp|Q8LFP1.1|PRA1H_ARATH RecName: Full=PRA1 family protein H; Short=AtPRA1.H
gi|21536961|gb|AAM61302.1| unknown [Arabidopsis thaliana]
gi|92856594|gb|ABE77405.1| At4g27540 [Arabidopsis thaliana]
gi|332659955|gb|AEE85355.1| PRA1-like protein H [Arabidopsis thaliana]
Length = 241
Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 77/151 (50%), Gaps = 51/151 (33%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTAT-------------------------- 34
M F+ NPLSL+VPDPAFESWLRDS YLE+LD T
Sbjct: 1 MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTSAAAAAASSSASVSSSAAATSAASDD 60
Query: 35 ------------------TTSATAVTTASTKETA------TTPSWTREFIGALRSYSFPS 70
T S+ +K +A TTP WT FIG SYSFPS
Sbjct: 61 VVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTP-WTTGFIGNCDSYSFPS 119
Query: 71 SPHTLKLRVHENVKRYARNYASLFILFFACS 101
S ++RVHEN+KR+ARNYA+LFI+FFAC+
Sbjct: 120 SSQQARMRVHENIKRFARNYATLFIVFFACA 150
>gi|4469005|emb|CAB38266.1| hypothetical protein [Arabidopsis thaliana]
gi|7269608|emb|CAB81404.1| hypothetical protein [Arabidopsis thaliana]
Length = 208
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 77/151 (50%), Gaps = 51/151 (33%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTAT-------------------------- 34
M F+ NPLSL+VPDPAFESWLRDS YLE+LD T
Sbjct: 1 MAFSPNPLSLSVPDPAFESWLRDSGYLELLDHRTSAAAAAASSSASVSSSAAATSAASDD 60
Query: 35 ------------------TTSATAVTTASTKETA------TTPSWTREFIGALRSYSFPS 70
T S+ +K +A TTP WT FIG SYSFPS
Sbjct: 61 VVSSITGGFFASLLSRLVTVSSLLTINPFSKLSADDFSGDTTP-WTTGFIGNCDSYSFPS 119
Query: 71 SPHTLKLRVHENVKRYARNYASLFILFFACS 101
S ++RVHEN+KR+ARNYA+LFI+FFAC+
Sbjct: 120 SSQQARMRVHENIKRFARNYATLFIVFFACA 150
>gi|302142972|emb|CBI20267.3| unnamed protein product [Vitis vinifera]
Length = 231
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 75/140 (53%), Gaps = 39/140 (27%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTATT--------------------TSATA 40
M F+SNPLSL+VPD AFE+WLRD+ YLE++D T+ S
Sbjct: 1 MAFSSNPLSLSVPDAAFETWLRDTGYLEVVDRRTSDLHRLSSGGDSSSTTASIPSNSFFF 60
Query: 41 VTTASTKET-------------------ATTPSWTREFIGALRSYSFPSSPHTLKLRVHE 81
V+ S T TPSWT F+G SY+FPSS +LRVHE
Sbjct: 61 VSILSHLGTLLSLFTLNPFSKLTSDDFSGPTPSWTLAFVGFCDSYTFPSSSSQARLRVHE 120
Query: 82 NVKRYARNYASLFILFFACS 101
NVKRYARNYA+LFI+ FAC+
Sbjct: 121 NVKRYARNYATLFIICFACT 140
>gi|225461516|ref|XP_002285129.1| PREDICTED: PRA1 family protein H-like [Vitis vinifera]
Length = 233
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 75/140 (53%), Gaps = 39/140 (27%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTATT--------------------TSATA 40
M F+SNPLSL+VPD AFE+WLRD+ YLE++D T+ S
Sbjct: 3 MAFSSNPLSLSVPDAAFETWLRDTGYLEVVDRRTSDLHRLSSGGDSSSTTASIPSNSFFF 62
Query: 41 VTTASTKET-------------------ATTPSWTREFIGALRSYSFPSSPHTLKLRVHE 81
V+ S T TPSWT F+G SY+FPSS +LRVHE
Sbjct: 63 VSILSHLGTLLSLFTLNPFSKLTSDDFSGPTPSWTLAFVGFCDSYTFPSSSSQARLRVHE 122
Query: 82 NVKRYARNYASLFILFFACS 101
NVKRYARNYA+LFI+ FAC+
Sbjct: 123 NVKRYARNYATLFIICFACT 142
>gi|147844569|emb|CAN80067.1| hypothetical protein VITISV_019028 [Vitis vinifera]
Length = 244
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 73/139 (52%), Gaps = 39/139 (28%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTATT--------------------TSATA 40
M F+SNPLSL+VPD AFE+WLRD+ YLE++D T+ S
Sbjct: 1 MAFSSNPLSLSVPDAAFETWLRDTGYLEVVDRRTSDLHRLSSGGDSSSTTASIPSNSFFF 60
Query: 41 VTTASTKET-------------------ATTPSWTREFIGALRSYSFPSSPHTLKLRVHE 81
V+ S T TPSWT F+G SY FPSS +LRVHE
Sbjct: 61 VSILSHLGTLLSLFTLNPFSKLTSDDFSGPTPSWTLAFVGFCDSYXFPSSSSQARLRVHE 120
Query: 82 NVKRYARNYASLFILFFAC 100
NVKRYARNYA+LFI+ FAC
Sbjct: 121 NVKRYARNYATLFIICFAC 139
>gi|388499328|gb|AFK37730.1| unknown [Medicago truncatula]
Length = 229
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 81/134 (60%), Gaps = 35/134 (26%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTATTTSATAVTTASTKE------------ 48
MVF+SNPL+L+VP+PAFESWLRD+ YLE++D T+ +A AV+T +
Sbjct: 1 MVFSSNPLALSVPEPAFESWLRDTGYLELIDQRTSAAADAVSTTTVNSTSSPLVPATSLS 60
Query: 49 -----------------------TATTPSWTREFIGALRSYSFPSSPHTLKLRVHENVKR 85
+A TPSW+R F+G+ SYSFPSSP + RVHENVKR
Sbjct: 61 SKLLTLLSFLTLNPFAKLTADDFSADTPSWSRSFVGSSDSYSFPSSPSQARFRVHENVKR 120
Query: 86 YARNYASLFILFFA 99
YARNY+ LFI+FFA
Sbjct: 121 YARNYSYLFIVFFA 134
>gi|326509279|dbj|BAJ91556.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 70/136 (51%), Gaps = 38/136 (27%)
Query: 3 FASNPLSLNVPDPAFESWLRDSSYLEILD------------------TATTTSATAVTTA 44
F NPLSL+VPDPA + WLRDS YL++LD T++ A A A
Sbjct: 6 FKPNPLSLSVPDPALDRWLRDSGYLDLLDSSAPAPAAAAPTRASPASTSSGPGAAAEVLA 65
Query: 45 STKETAT------------------TPSWTREFIG--ALRSYSFPSSPHTLKLRVHENVK 84
+ A+ TPSW+ FIG SYS+P +P +LRV ENV+
Sbjct: 66 FARTLASLLSLNPFACLSAADLAAPTPSWSLAFIGPPGAASYSWPPTPTQARLRVQENVR 125
Query: 85 RYARNYASLFILFFAC 100
RYARNYA+L IL FAC
Sbjct: 126 RYARNYAALSILVFAC 141
>gi|226494267|ref|NP_001142609.1| uncharacterized protein LOC100274877 [Zea mays]
gi|195607284|gb|ACG25472.1| hypothetical protein [Zea mays]
gi|195607598|gb|ACG25629.1| hypothetical protein [Zea mays]
Length = 248
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 71/138 (51%), Gaps = 40/138 (28%)
Query: 3 FASNPLSLNVPDPAFESWLRDSSYLEILDTATT-------------------TSATAVTT 43
F NPLSL+VPDPA + WLRD+ YL++LD+ T +S AV
Sbjct: 7 FKPNPLSLSVPDPALDRWLRDTGYLDLLDSTPTGGPSSASAPSTSSPAAGPDSSGVAVDI 66
Query: 44 -------------------ASTKETATTPSWTREFIG--ALRSYSFPSSPHTLKLRVHEN 82
++T A TPSW+ F+G SYS+P +P +LRV EN
Sbjct: 67 LAFARTLASLLALNPFARLSATDLAAPTPSWSLAFLGTPGAASYSWPPTPTQARLRVQEN 126
Query: 83 VKRYARNYASLFILFFAC 100
V+RYARNYA+L IL FAC
Sbjct: 127 VRRYARNYAALTILVFAC 144
>gi|242063914|ref|XP_002453246.1| hypothetical protein SORBIDRAFT_04g002460 [Sorghum bicolor]
gi|241933077|gb|EES06222.1| hypothetical protein SORBIDRAFT_04g002460 [Sorghum bicolor]
Length = 252
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 70/143 (48%), Gaps = 45/143 (31%)
Query: 3 FASNPLSLNVPDPAFESWLRDSSYLEILDTATT------------------------TSA 38
F NPLSL+VPDPA + WLRDS YL++LD+ TT +S
Sbjct: 7 FKPNPLSLSVPDPALDRWLRDSGYLDLLDSTTTGAPSSTSAPSTSASAAARPGTGPVSSG 66
Query: 39 TAVTTASTKET-------------------ATTPSWTREFIG--ALRSYSFPSSPHTLKL 77
A + T A TPSW+ F+G SYS+P +P +L
Sbjct: 67 VAADVLAFARTLASLLALNPFARLSTADLAAPTPSWSLAFVGPPGAASYSWPPTPTQARL 126
Query: 78 RVHENVKRYARNYASLFILFFAC 100
RV ENV+RYARNYA+L IL FAC
Sbjct: 127 RVQENVRRYARNYAALTILVFAC 149
>gi|116792474|gb|ABK26382.1| unknown [Picea sitchensis]
Length = 223
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 67/121 (55%), Gaps = 21/121 (17%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTATTTSATAVTTASTKETA---------- 50
M F++NPLSL++P AFE+WLRDS YLEI+D + V S K ++
Sbjct: 1 MAFSANPLSLSLPQRAFETWLRDSGYLEIIDECAIDDSVEVVGGSNKWSSLLTINPFAKL 60
Query: 51 TTPS-------WTREF----IGALRSYSFPSSPHTLKLRVHENVKRYARNYASLFILFFA 99
TT WT EF +G SYS+PSS +KLR+ EN+KRY RNY L +L A
Sbjct: 61 TTEDLSRDAVPWTGEFFDSGLGPAHSYSWPSSITQMKLRMEENLKRYTRNYIYLSLLILA 120
Query: 100 C 100
C
Sbjct: 121 C 121
>gi|226530433|ref|NP_001140454.1| hypothetical protein [Zea mays]
gi|194699580|gb|ACF83874.1| unknown [Zea mays]
gi|195607524|gb|ACG25592.1| hypothetical protein [Zea mays]
gi|219887493|gb|ACL54121.1| unknown [Zea mays]
gi|413935437|gb|AFW69988.1| hypothetical protein ZEAMMB73_709055 [Zea mays]
Length = 256
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 70/145 (48%), Gaps = 47/145 (32%)
Query: 3 FASNPLSLNVPDPAFESWLRDSSYLEILDTATTTS------------------------- 37
F NPLSL+VPDPA + WLRDS YL++LD+ TTT
Sbjct: 7 FKPNPLSLSVPDPALDRWLRDSGYLDLLDSTTTTGRPSSSASGPSAPSSAAYSPGAGQAS 66
Query: 38 --------ATAVTTAS------------TKETATTPSWTREFIG--ALRSYSFPSSPHTL 75
A A T AS A TPSW+ F+G SYS+P +P
Sbjct: 67 SGVAADVLAFARTLASLLALNPFARLSTADLAAPTPSWSLAFVGPPGAASYSWPPTPTQA 126
Query: 76 KLRVHENVKRYARNYASLFILFFAC 100
+LRV EN +RYARNYA+L IL FAC
Sbjct: 127 RLRVQENFRRYARNYAALAILVFAC 151
>gi|218201706|gb|EEC84133.1| hypothetical protein OsI_30478 [Oryza sativa Indica Group]
Length = 222
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 70/147 (47%), Gaps = 49/147 (33%)
Query: 3 FASNPLSLNVPDPAFESWLRDSSYLEILDTA----------------------------- 33
F NPLSL+VPDPA + WLRDS YL+ILD++
Sbjct: 8 FKPNPLSLSVPDPALDRWLRDSGYLDILDSSASASASASTSSSPSATTTTAAASSTSTLI 67
Query: 34 --------------TTTSATAVT----TASTKETATTPSWTREFIG--ALRSYSFPSSPH 73
T S A+ ++T A TPSW+ F+G SYS+P +
Sbjct: 68 NPTSAAAAVLAFARTLASVLALNPFARLSTTDLAAPTPSWSLAFLGPPGAASYSWPPTST 127
Query: 74 TLKLRVHENVKRYARNYASLFILFFAC 100
+LRV ENV+RYARNYA+L IL FAC
Sbjct: 128 QARLRVQENVRRYARNYAALSILVFAC 154
>gi|125604810|gb|EAZ43846.1| hypothetical protein OsJ_28462 [Oryza sativa Japonica Group]
Length = 259
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 70/147 (47%), Gaps = 49/147 (33%)
Query: 3 FASNPLSLNVPDPAFESWLRDSSYLEILDTA----------------------------- 33
F NPLSL+VPDPA + WLRDS YL+ILD++
Sbjct: 8 FKPNPLSLSVPDPALDRWLRDSGYLDILDSSASASASASTSSSPSATTTTAAASSTSTLI 67
Query: 34 --------------TTTSATAVT----TASTKETATTPSWTREFIG--ALRSYSFPSSPH 73
T S A+ ++T A TPSW+ F+G SYS+P +
Sbjct: 68 NPTSAAAAVLAFARTLASVLALNPFARLSTTDLAAPTPSWSLAFLGPPGAASYSWPPTST 127
Query: 74 TLKLRVHENVKRYARNYASLFILFFAC 100
+LRV ENV+RYARNYA+L IL FAC
Sbjct: 128 QARLRVQENVRRYARNYAALSILVFAC 154
>gi|115478078|ref|NP_001062634.1| Os09g0134400 [Oryza sativa Japonica Group]
gi|113630867|dbj|BAF24548.1| Os09g0134400 [Oryza sativa Japonica Group]
gi|215697350|dbj|BAG91344.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 260
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 70/147 (47%), Gaps = 49/147 (33%)
Query: 3 FASNPLSLNVPDPAFESWLRDSSYLEILDTA----------------------------- 33
F NPLSL+VPDPA + WLRDS YL+ILD++
Sbjct: 8 FKPNPLSLSVPDPALDRWLRDSGYLDILDSSASASASASTSSSPSATTTTAAASSTSTLI 67
Query: 34 --------------TTTSATAVT----TASTKETATTPSWTREFIG--ALRSYSFPSSPH 73
T S A+ ++T A TPSW+ F+G SYS+P +
Sbjct: 68 NPTSAAAAVLAFARTLASVLALNPFARLSTTDLAAPTPSWSLAFLGPPGAASYSWPPTST 127
Query: 74 TLKLRVHENVKRYARNYASLFILFFAC 100
+LRV ENV+RYARNYA+L IL FAC
Sbjct: 128 QARLRVQENVRRYARNYAALSILVFAC 154
>gi|326503346|dbj|BAJ99298.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 231
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 64/128 (50%), Gaps = 38/128 (29%)
Query: 11 NVPDPAFESWLRDSSYLEILD------------------TATTTSATAVTTASTKETAT- 51
+VPDPA + WLRDS YL++LD T++ A A A + A+
Sbjct: 1 SVPDPALDRWLRDSGYLDLLDSSAPAPAAAAPTRASPASTSSGPGAAAEVLAFARTLASL 60
Query: 52 -----------------TPSWTREFIG--ALRSYSFPSSPHTLKLRVHENVKRYARNYAS 92
TPSW+ FIG SYS+P +P +LRV ENV+RYARNYA+
Sbjct: 61 LSLNPFACLSAADLAAPTPSWSLAFIGPPGAASYSWPPTPTQARLRVQENVRRYARNYAA 120
Query: 93 LFILFFAC 100
L IL FAC
Sbjct: 121 LSILVFAC 128
>gi|361067309|gb|AEW07966.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167016|gb|AFG66524.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167017|gb|AFG66525.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167018|gb|AFG66526.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167019|gb|AFG66527.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167020|gb|AFG66528.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167021|gb|AFG66529.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167022|gb|AFG66530.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167023|gb|AFG66531.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167024|gb|AFG66532.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167025|gb|AFG66533.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167026|gb|AFG66534.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167027|gb|AFG66535.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167028|gb|AFG66536.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167029|gb|AFG66537.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167030|gb|AFG66538.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167031|gb|AFG66539.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167032|gb|AFG66540.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
gi|383167033|gb|AFG66541.1| Pinus taeda anonymous locus 0_15690_01 genomic sequence
Length = 108
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 21/107 (19%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTATTTSATAVTTASTKETA---------- 50
M F++NPLSL++P AFE+WLRDS YLEI+D + S+K ++
Sbjct: 1 MAFSANPLSLSLPQRAFETWLRDSGYLEIIDDCAIDESAKAAGGSSKLSSLLTINPFAKL 60
Query: 51 -------TTPSWTREF----IGALRSYSFPSSPHTLKLRVHENVKRY 86
SWT EF +G SYS+PSS +KLR+ EN+KRY
Sbjct: 61 TTEDLSRDAVSWTGEFFDSGLGPAHSYSWPSSITQMKLRMEENLKRY 107
>gi|302820192|ref|XP_002991764.1| hypothetical protein SELMODRAFT_186360 [Selaginella moellendorffii]
gi|300140445|gb|EFJ07168.1| hypothetical protein SELMODRAFT_186360 [Selaginella moellendorffii]
Length = 210
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 22/120 (18%)
Query: 3 FASNPLSLNVPDPAFESWLRDSSYLEILDTATTTSATAVTTAS----------------- 45
F NPLSL +P +FE+WL+D +LEIL+ T +A S
Sbjct: 4 FVVNPLSLCIPQSSFEAWLKDKGFLEILEKCTLDNAIIAGQGSFVALCKLLKLNPFESLT 63
Query: 46 TKETATTPS-WTREFI----GALRSYSFPSSPHTLKLRVHENVKRYARNYASLFILFFAC 100
++ P WT EF+ G +YS+P S +K R+ EN+KRY NY L + FAC
Sbjct: 64 VEDLGKKPVPWTAEFLDCGKGPAETYSWPMSVTQVKFRMDENLKRYTGNYLVLIAITFAC 123
>gi|413935438|gb|AFW69989.1| hypothetical protein ZEAMMB73_709055 [Zea mays]
Length = 239
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 62/141 (43%), Gaps = 47/141 (33%)
Query: 3 FASNPLSLNVPDPAFESWLRDSSYLEILDTATTTS------------------------- 37
F NPLSL+VPDPA + WLRDS YL++LD+ TTT
Sbjct: 7 FKPNPLSLSVPDPALDRWLRDSGYLDLLDSTTTTGRPSSSASGPSAPSSAAYSPGAGQAS 66
Query: 38 --------ATAVTTAS------------TKETATTPSWTREFIG--ALRSYSFPSSPHTL 75
A A T AS A TPSW+ F+G SYS+P +P
Sbjct: 67 SGVAADVLAFARTLASLLALNPFARLSTADLAAPTPSWSLAFVGPPGAASYSWPPTPTQA 126
Query: 76 KLRVHENVKRYARNYASLFIL 96
+LRV EN +RY A L +L
Sbjct: 127 RLRVQENFRRYRMPMALLGML 147
>gi|194466171|gb|ACF74316.1| unknown [Arachis hypogaea]
Length = 149
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 43/58 (74%)
Query: 44 ASTKETATTPSWTREFIGALRSYSFPSSPHTLKLRVHENVKRYARNYASLFILFFACS 101
A+ TPSW+R F+G SYSFPSS +LRVHENVKRYARNYA LFILFFAC+
Sbjct: 46 AAEDFAGDTPSWSRAFVGFSGSYSFPSSSAQARLRVHENVKRYARNYAYLFILFFACA 103
>gi|168010357|ref|XP_001757871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691147|gb|EDQ77511.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 743
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 58/126 (46%), Gaps = 28/126 (22%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTATTTSATAVTTAS-----TKETATTP-- 53
M F NPLSL++ + AFE+WLRD+ +LE +D T S +K + P
Sbjct: 412 MAFNENPLSLSLSETAFEAWLRDNGHLETIDRTGLDHHLRFPTQSSFKELSKAVKSNPFM 471
Query: 54 ------------SWTREF----IGALRSYSFPSSPHTLKLRVHENVKRYARNYASL---- 93
WT EF G +YS+P S KLR+ EN++RY NY L
Sbjct: 472 TLTLDDLLKKPVPWTGEFFDCGFGPGETYSWPRSIAQAKLRMDENIRRYTGNYVILVAVV 531
Query: 94 -FILFF 98
FIL +
Sbjct: 532 YFILLY 537
>gi|356509624|ref|XP_003523546.1| PREDICTED: LOW QUALITY PROTEIN: PRA1 family protein H-like [Glycine
max]
Length = 169
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 63/116 (54%), Gaps = 30/116 (25%)
Query: 14 DPAFESWLRDSSYLEILDTATTTSATAVTTASTKETAT---------------------- 51
+PAFESWL D+S+L++LD T++S A + A + +T
Sbjct: 26 EPAFESWLCDTSFLKVLDHRTSSSTVAASLAPSSAASTLFSRLLTFLSLFTLNAFAKLAA 85
Query: 52 ------TPSWTREFIGALRSYSFPSSPHTLKLRVHENVKRYARNYASLFILFFACS 101
TPSW+ F SYSFPSSP +LRV ENVKRY RNY LFI+FFAC+
Sbjct: 86 DDFAVDTPSWSCSFFAFSDSYSFPSSPSXTRLRVQENVKRYTRNY--LFIIFFACT 139
>gi|297802846|ref|XP_002869307.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315143|gb|EFH45566.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 192
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTAT 34
M F+ NPLSL+V DPAFESWLRDSSYLE+LD T
Sbjct: 18 MAFSPNPLSLSVLDPAFESWLRDSSYLELLDHRT 51
>gi|297846506|ref|XP_002891134.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336976|gb|EFH67393.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 192
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTAT 34
M F+ NPLSL+V DPAFESWLRDSSYLE+LD T
Sbjct: 18 MAFSPNPLSLSVLDPAFESWLRDSSYLELLDHRT 51
>gi|297809245|ref|XP_002872506.1| hypothetical protein ARALYDRAFT_327202 [Arabidopsis lyrata subsp.
lyrata]
gi|297318343|gb|EFH48765.1| hypothetical protein ARALYDRAFT_327202 [Arabidopsis lyrata subsp.
lyrata]
Length = 183
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILDTAT 34
M F+ NPLSL+V DPAFESWLRDSSYLE+LD T
Sbjct: 1 MAFSPNPLSLSVLDPAFESWLRDSSYLELLDHRT 34
>gi|297823541|ref|XP_002879653.1| hypothetical protein ARALYDRAFT_321420 [Arabidopsis lyrata subsp.
lyrata]
gi|297325492|gb|EFH55912.1| hypothetical protein ARALYDRAFT_321420 [Arabidopsis lyrata subsp.
lyrata]
Length = 183
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILD 31
M F+ NPLSL+V DPAFESWLRDSSYLE+LD
Sbjct: 1 MAFSPNPLSLSVLDPAFESWLRDSSYLELLD 31
>gi|297814099|ref|XP_002874933.1| hypothetical protein ARALYDRAFT_327582 [Arabidopsis lyrata subsp.
lyrata]
gi|297320770|gb|EFH51192.1| hypothetical protein ARALYDRAFT_327582 [Arabidopsis lyrata subsp.
lyrata]
Length = 183
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 28/31 (90%)
Query: 1 MVFASNPLSLNVPDPAFESWLRDSSYLEILD 31
M F+ NPLSL+V DPAFESWLRDSSYLE+LD
Sbjct: 1 MAFSPNPLSLSVLDPAFESWLRDSSYLELLD 31
>gi|297831722|ref|XP_002883743.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329583|gb|EFH60002.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 420
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 28/32 (87%)
Query: 3 FASNPLSLNVPDPAFESWLRDSSYLEILDTAT 34
F+ NPLSL+V DPAFESWLRDSSYLE+LD T
Sbjct: 20 FSPNPLSLSVLDPAFESWLRDSSYLELLDHRT 51
>gi|297830078|ref|XP_002882921.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328761|gb|EFH59180.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 158
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 59 FIGALRSYSFPSSPHTLKLRVHENVKRYARNYASLFILFFACS 101
F G YSFP S RV ENV+++ NY +F++FF S
Sbjct: 32 FRGRTELYSFPESQSEAAARVQENVRQFNGNYIFVFVIFFLLS 74
>gi|241111175|ref|XP_002399228.1| prenylated Rab acceptor, putative [Ixodes scapularis]
gi|215492916|gb|EEC02557.1| prenylated Rab acceptor, putative [Ixodes scapularis]
Length = 157
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 67 SFPSSPHTLKLRVHENVKRYARNYASLFILFFACS 101
S P + L RVH N+++Y NY +F+ FF C
Sbjct: 18 SVPKTAQELGHRVHSNLEKYRSNYELVFVAFFVCC 52
>gi|307718807|ref|YP_003874339.1| hypothetical protein STHERM_c11210 [Spirochaeta thermophila DSM
6192]
gi|306532532|gb|ADN02066.1| hypothetical protein STHERM_c11210 [Spirochaeta thermophila DSM
6192]
Length = 613
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 19/24 (79%)
Query: 59 FIGALRSYSFPSSPHTLKLRVHEN 82
F+ ALRSY+ PSSP TL+LR HE
Sbjct: 520 FLEALRSYASPSSPSTLELRAHEE 543
>gi|21553423|gb|AAM62516.1| unknown [Arabidopsis thaliana]
Length = 391
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 3 FASNPLSLNVPDPAFESWLRDSSYLEILDTATTTSATAVTTASTKETATTPSWTREFIGA 62
F+SN ++ +PAF +LRD+ + + L A+ A + R I
Sbjct: 27 FSSNATPASISNPAFVEFLRDNGFQKPL---------AIAIAMRYPNLKSLEQPRSVIQM 77
Query: 63 LRSYSFPSSPHTLKLRVHENVKRY 86
L+SYSF + +RVH + Y
Sbjct: 78 LKSYSFSDTQIQKSIRVHPRMMFY 101
>gi|15238313|ref|NP_201300.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
gi|8843759|dbj|BAA97307.1| unnamed protein product [Arabidopsis thaliana]
gi|332010591|gb|AED97974.1| Mitochondrial transcription termination factor family protein
[Arabidopsis thaliana]
Length = 391
Score = 34.3 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 3 FASNPLSLNVPDPAFESWLRDSSYLEILDTATTTSATAVTTASTKETATTPSWTREFIGA 62
F+SN ++ +PAF +LRD+ + + L A+ A + R I
Sbjct: 27 FSSNATPASISNPAFVEFLRDNGFQKPL---------AIAIAMRYPNLKSLEQPRSVIQM 77
Query: 63 LRSYSFPSSPHTLKLRVHENVKRY 86
L+SYSF + +RVH + Y
Sbjct: 78 LKSYSFSDTQIQKSIRVHPRMMFY 101
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.126 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,526,957,859
Number of Sequences: 23463169
Number of extensions: 47097307
Number of successful extensions: 282372
Number of sequences better than 100.0: 94
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 282069
Number of HSP's gapped (non-prelim): 270
length of query: 101
length of database: 8,064,228,071
effective HSP length: 70
effective length of query: 31
effective length of database: 6,421,806,241
effective search space: 199075993471
effective search space used: 199075993471
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)