BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047998
(558 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B3QYP1|SYP_CHLT3 Proline--tRNA ligase OS=Chloroherpeton thalassium (strain ATCC
35110 / GB-78) GN=proS PE=3 SV=1
Length = 481
Score = 544 bits (1401), Expect = e-154, Method: Compositional matrix adjust.
Identities = 260/485 (53%), Positives = 345/485 (71%), Gaps = 15/485 (3%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
IT R+QD++ WY+D++ A+LADY VRG MVIRP GYAIWE +Q L+ FKETGH N
Sbjct: 5 ITSRAQDYSQWYIDIVRFAKLADYSDVRGCMVIRPNGYAIWEKMQAALDRMFKETGHVNA 64
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP FIP SFI+KEA H+EGF+PE A+VT GGG+EL+EKL VRPTSETI+ + +WI S
Sbjct: 65 YFPLFIPESFIQKEAEHIEGFAPECAVVTHGGGEELQEKLYVRPTSETIIWSSYKKWIQS 124
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EA++E ++MI++Y FA
Sbjct: 125 YRDLPILINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATETEAKEEVLRMIEVYRHFA 184
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
E+ AIPVI G K++ E FAGA T+ IEAMM D +ALQAGTSH+LGQNF+ AF +F
Sbjct: 185 EEYMAIPVIVGMKTESEKFAGAHETFCIEAMMQDGKALQAGTSHHLGQNFAKAFDCKFQT 244
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
++G ++VW +SW +STR +G +IM H DD GL+LPP++A Q VIVPI K +K VL
Sbjct: 245 KDGSLEYVWASSWGVSTRLIGALIMAHSDDKGLVLPPKLASRQAVIVPILK--GDKAAVL 302
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A+ +++L+ +G++V LDDS+Q TPGWKF +E++GIP+RIE+GPRDV++G V++RR
Sbjct: 303 EKAVELEKMLKAAGVQVFLDDSEQNTPGWKFAEYELQGIPVRIELGPRDVAAGKCVVARR 362
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAIS 500
D K+ + I KD LD IQ+ L ERA FR+ V++YEELK +
Sbjct: 363 DTSEKETLEIDTAFPQKI-----KDLLDSIQTGLFERALRFREEKTKVVTTYEELKAQVE 417
Query: 501 MGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNK-------TCFMTGNPAQEVAL 553
+G +A W + E K+KEET ATIRC P + K C +GNP++++ +
Sbjct: 418 VG-FAVAHWDGTPETEAKIKEETKATIRCLPVSKDFATKYGINTEGKCVFSGNPSKQMVV 476
Query: 554 FAKSY 558
FAK+Y
Sbjct: 477 FAKAY 481
>sp|A7NKX0|SYP_ROSCS Proline--tRNA ligase OS=Roseiflexus castenholzii (strain DSM 13941
/ HLO8) GN=proS PE=3 SV=1
Length = 480
Score = 543 bits (1399), Expect = e-153, Method: Compositional matrix adjust.
Identities = 256/480 (53%), Positives = 345/480 (71%), Gaps = 7/480 (1%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPV-RGTMVIRPYGYAIWEAIQDYLNVKFKETGHSN 139
ITPR+QD++ WYLD++ A+LADY V +G +V +P GYA+WEAIQ L+ + K TGH N
Sbjct: 6 ITPRAQDYSQWYLDIVQQADLADYAEVVKGCIVFKPTGYALWEAIQRGLDDRIKATGHVN 65
Query: 140 MYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIH 199
YFP IP SF+ KEA HVEGF+PE+A VT GG++L E V+RPTSETI+ + +++W+
Sbjct: 66 AYFPLLIPKSFLMKEAEHVEGFAPEVAEVTRAGGEDLAEPYVIRPTSETIIGYFYSKWVR 125
Query: 200 SYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMI-DIYTK 258
SYRDLPLL+NQWANV RWEMRT+PF+RT EFLWQEGHT HAT E+AE+E + ++ ++Y
Sbjct: 126 SYRDLPLLINQWANVMRWEMRTRPFLRTTEFLWQEGHTVHATEEDAERETLLILHEVYAD 185
Query: 259 FAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQF 318
F + AIPVI G KS+ E F GA R+Y IEAMM D RALQAGTSHNLGQNF+ AF +
Sbjct: 186 FVEKDMAIPVIRGLKSEKEKFPGALRSYCIEAMMQDGRALQAGTSHNLGQNFARAFDITY 245
Query: 319 TDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTG 378
TD++ Q+ W TSW +STR +G +IMTH DD GL++PPR+AP QVV+VPI++ E++
Sbjct: 246 TDQHNTIQYAWTTSWGVSTRLIGALIMTHSDDEGLVIPPRLAPTQVVVVPIYRNDAERSV 305
Query: 379 VLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVIS 438
V+ A+ K +R K+DD D TPG+KFN WE+KG+P+R+EIGP+D+ GSV I+
Sbjct: 306 VME-AVQRMTAEWKGLLRFKVDDRDNLTPGFKFNEWELKGVPIRVEIGPKDIEKGSVAIA 364
Query: 439 RRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEA 498
RRD PG++GK F + L A + L+EIQ AL RA +FR+++ DV++YEELK+
Sbjct: 365 RRDQPGREGKSF---VPQEGLTARLAALLEEIQQALYRRALAFRETHTADVTTYEELKQQ 421
Query: 499 ISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKSY 558
+ G +AR W+ + DE +++EET ATIRC P +QPQ C TG + +FA++Y
Sbjct: 422 VERG-FARCYWAGTMEDEKRIQEETRATIRCIPLDQPQQAGRCIYTGKETTQQVIFARAY 480
>sp|A5UU62|SYP_ROSS1 Proline--tRNA ligase OS=Roseiflexus sp. (strain RS-1) GN=proS PE=3
SV=1
Length = 480
Score = 541 bits (1394), Expect = e-153, Method: Compositional matrix adjust.
Identities = 256/484 (52%), Positives = 344/484 (71%), Gaps = 15/484 (3%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPV-RGTMVIRPYGYAIWEAIQDYLNVKFKETGHSN 139
ITPR+QD++ WYLD++ A+LADY V +G +V +P GYAIWEAIQ L+ + K TGH N
Sbjct: 6 ITPRAQDYSQWYLDIVQQADLADYAEVVKGCIVFKPTGYAIWEAIQRGLDDRIKATGHVN 65
Query: 140 MYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIH 199
YFP IP SF+ KEA HVEGF+PE+A VT GG++L E V+RPTSETI+ + +++W+
Sbjct: 66 AYFPLLIPKSFLMKEAEHVEGFAPEVAEVTRAGGEDLAEPYVIRPTSETIIGYFYSKWVR 125
Query: 200 SYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMI-DIYTK 258
SYRDLPLL+NQWANV RWEMRT+PF+RT EFLWQEGHT HAT E+AE+E + ++ ++Y
Sbjct: 126 SYRDLPLLINQWANVMRWEMRTRPFLRTTEFLWQEGHTVHATEEDAERETLLILHEVYAD 185
Query: 259 FAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQF 318
F + AIPVI G KS+ E F GA R+Y IEAMM D RALQAGTSHNLGQNF+ AF +
Sbjct: 186 FVEKEMAIPVIKGLKSEKEKFPGALRSYCIEAMMQDGRALQAGTSHNLGQNFARAFDITY 245
Query: 319 TDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTG 378
TD+ Q+ W TSW +STR +G +IMTH DD GL++PPR+AP QVV+VPI++ E++
Sbjct: 246 TDQQNTIQYAWTTSWGVSTRLIGALIMTHSDDEGLVIPPRLAPTQVVVVPIYRNDAERSV 305
Query: 379 VLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVIS 438
V+ A+ K +R K+DD D TPG+KFN WE+KG+P+R+EIGP+D+ GSV I+
Sbjct: 306 VME-AVQRMTAEWKGRLRFKIDDRDNLTPGFKFNEWELKGVPIRVEIGPKDIEKGSVAIA 364
Query: 439 RRDVPGKQGKVF----GISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEE 494
RRD PG++GK F G++ + L L+EIQ AL RA +FR+ + DV++Y+E
Sbjct: 365 RRDQPGREGKSFVPQDGLTDRLTAL-------LEEIQQALYRRALTFREDHTADVATYDE 417
Query: 495 LKEAISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALF 554
LK+ + G +AR W+ + DE +++EET ATIRC P +QPQ C TG + +F
Sbjct: 418 LKQQVERG-FARCYWAGTTEDEKRIQEETRATIRCIPLDQPQQAGRCVYTGKETTQQVIF 476
Query: 555 AKSY 558
A++Y
Sbjct: 477 ARAY 480
>sp|B3EP23|SYP_CHLPB Proline--tRNA ligase OS=Chlorobium phaeobacteroides (strain BS1)
GN=proS PE=3 SV=1
Length = 481
Score = 531 bits (1368), Expect = e-150, Method: Compositional matrix adjust.
Identities = 259/486 (53%), Positives = 340/486 (69%), Gaps = 17/486 (3%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
ITPR +D++ WY+D++ +A+LADY VRG MVIRP GYAIWE +Q L+ FK TGH N
Sbjct: 5 ITPREEDYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQAALDGMFKATGHVNA 64
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP FIP S+I+KEA H+EGF+PE A+VT GGG+EL EKL VRPTSET++ + +WI S
Sbjct: 65 YFPLFIPESYIQKEADHIEGFAPECAVVTHGGGEELAEKLYVRPTSETVIWASYKKWIQS 124
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLPLL+NQWANV RWEMRT+ F+RT EFLWQEGHTAHATPEEA+ E ++MI++Y FA
Sbjct: 125 YRDLPLLINQWANVVRWEMRTRLFLRTSEFLWQEGHTAHATPEEAQDEVLRMINVYKTFA 184
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
E+ A+PV+ GRK+ E FAGA T+ IEAMM DK+ALQAGTSHNLGQNF+ AF QF
Sbjct: 185 EEYMAMPVLIGRKTDSEKFAGADETWCIEAMMQDKKALQAGTSHNLGQNFAKAFDCQFQS 244
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
+NG ++VW TSW +STR +G +IM H DD GL+LPP++A QVVIVPI + +K V
Sbjct: 245 KNGTLEYVWATSWGVSTRLIGALIMAHSDDRGLVLPPKLASRQVVIVPILR--GDKQAVA 302
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A + + L +GI +DDS+Q +PGWKF +E++GIP+R+EIGPRD+SS + +RR
Sbjct: 303 EKAHALADELNSNGIHAFVDDSEQNSPGWKFAEYELQGIPVRLEIGPRDISSNICIAARR 362
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAIS 500
D KQ I+++ + A + LD IQ ++ + A FR++N +VSSY+E K+ I
Sbjct: 363 DTGEKQ----QIALDDT-FAASISSLLDAIQQSMFKSALEFREANTREVSSYDEFKKCID 417
Query: 501 MGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNK--------TCFMTGNPAQEVA 552
G + W + E K+KEET ATIR P E P K C +GNP++
Sbjct: 418 KG-FLIAHWDGREETEAKIKEETKATIRLIP-EDPDFRKKYSMDEPGICICSGNPSKGKV 475
Query: 553 LFAKSY 558
+FAK+Y
Sbjct: 476 VFAKAY 481
>sp|Q1CXV1|SYP_MYXXD Proline--tRNA ligase OS=Myxococcus xanthus (strain DK 1622) GN=proS
PE=3 SV=1
Length = 483
Score = 531 bits (1368), Expect = e-150, Method: Compositional matrix adjust.
Identities = 255/480 (53%), Positives = 341/480 (71%), Gaps = 9/480 (1%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
+TPR + F+ WY+D++ A+LADY V+G MVIRP GYA+WE +Q L+ FK+ GH N
Sbjct: 11 LTPREKGFSEWYVDLVQKAKLADYSDVKGCMVIRPNGYALWENMQRVLDKMFKDLGHKNA 70
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP IP S+++KEA HVEGF+P+LA+VT GG +LEE V+RPTSETI+N F +WI S
Sbjct: 71 YFPLLIPESYLKKEAEHVEGFNPQLAVVTHAGGSKLEEPYVIRPTSETIINRSFAKWIQS 130
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLPLL+NQWANV RWEMRT+ F+RT EFLWQEGHT H T E+AEKE QM+++Y FA
Sbjct: 131 YRDLPLLLNQWANVMRWEMRTRLFLRTTEFLWQEGHTCHETEEDAEKETRQMLEVYRTFA 190
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
++ A+PV+ G+KS+ E FAGA RTY+IEAMM DK+ALQAGTSHNLGQNF+ AF TQF
Sbjct: 191 EDYMAMPVMTGQKSESERFAGALRTYSIEAMMQDKKALQAGTSHNLGQNFAKAFDTQFQG 250
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKAD--EKTG 378
+G+ HVWQTSW +STR +GG+IMTH DD GL++PP++A VVI+PI+ KA EK
Sbjct: 251 RDGKMHHVWQTSWGVSTRLIGGLIMTHSDDAGLIVPPKLAATHVVIIPIFGKASDAEKAQ 310
Query: 379 VLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVIS 438
VL + L+K+G+ V LDD D ++PG+K+N E+ G LRIE+GP+D++ S V+
Sbjct: 311 VLEKTNALAADLRKAGLGVVLDDDDTKSPGFKYNEHELIGTCLRIELGPKDLAKNSCVMV 370
Query: 439 RRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEA 498
RRDV K+ +S++ ++ +A + LD +Q L +A SFRDS+ +V+SYEELKE
Sbjct: 371 RRDVRQKE----FVSLDEAVSKA--QAMLDAMQKDLFTKAKSFRDSHTFEVNSYEELKEK 424
Query: 499 ISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKSY 558
G + W+ E ++KEETG T RC PF+ Q C +TG P+ +F+K+Y
Sbjct: 425 ADQG-FLLAHWNLDPKVEARIKEETGLTTRCRPFDLKQEPGKCVVTGEPSPGRIVFSKAY 483
>sp|B3QPX3|SYP_CHLP8 Proline--tRNA ligase OS=Chlorobaculum parvum (strain NCIB 8327)
GN=proS PE=3 SV=1
Length = 481
Score = 528 bits (1359), Expect = e-149, Method: Compositional matrix adjust.
Identities = 258/485 (53%), Positives = 332/485 (68%), Gaps = 15/485 (3%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
IT R QD++ WY+D++ +A+LADY VRG MVIRP GYAIWE +Q L+ FKETGH N
Sbjct: 5 ITSRQQDYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQAALDGMFKETGHVNA 64
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP FIP SFI KEA H+EGF+PE A+VT GGG+EL EKL VRPTSETI+ + +WI S
Sbjct: 65 YFPMFIPESFIAKEAEHIEGFAPECAVVTHGGGEELAEKLYVRPTSETIIWSSYKKWIQS 124
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLPLL+NQWANV RWEMRT+ F+RT EFLWQEGHTAHA PEEA++E ++MI++Y FA
Sbjct: 125 YRDLPLLINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHADPEEAQEEVIRMINVYRTFA 184
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
E+ A+PVI G+KS+ E FAGA TY IEAMM D +ALQAGTSHNLGQNF+ AF QF
Sbjct: 185 EEYMAMPVIVGKKSESEKFAGADATYCIEAMMQDGKALQAGTSHNLGQNFAKAFDCQFQT 244
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
+ G +VW TSW +STR +G +IM H DD GL+LPP++A QVVI+PI K +K V
Sbjct: 245 KEGVLDYVWATSWGVSTRLIGALIMAHSDDKGLVLPPKLASRQVVIIPILK--GDKEEVR 302
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
+ A + L K GI +DDS+ +PGWKF +E++GIP+RIE+GPRD++ G +++RR
Sbjct: 303 AHARFIAKALNKHGISTFVDDSENNSPGWKFAEYELQGIPVRIELGPRDIAEGKCIVARR 362
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAIS 500
D K + M +I E L+ IQ L ERA FR N V+ +++EE K +
Sbjct: 363 DTFEKTEVLLDAEMTENIEEI-----LNNIQQNLYERALQFRQDNTVEATTWEEFKAGVE 417
Query: 501 MGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNK-------TCFMTGNPAQEVAL 553
G + W +D E +KEET ATIR P ++ + TC +GNPA + +
Sbjct: 418 KG-FVIAHWDGTDETEALIKEETKATIRVMPTDEEYRKQYNMDEPGTCIRSGNPATQKVV 476
Query: 554 FAKSY 558
FAK+Y
Sbjct: 477 FAKAY 481
>sp|B3EE36|SYP_CHLL2 Proline--tRNA ligase OS=Chlorobium limicola (strain DSM 245 / NBRC
103803) GN=proS PE=3 SV=1
Length = 481
Score = 527 bits (1358), Expect = e-149, Method: Compositional matrix adjust.
Identities = 263/487 (54%), Positives = 333/487 (68%), Gaps = 19/487 (3%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
IT RSQD++ WY+D++ +A+LADY VRG MVIRP GYAIWE +Q L+ FKETGH N
Sbjct: 5 ITSRSQDYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQAALDAMFKETGHVNA 64
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP FIP S+I KEA H+EGF+PE A+VT GGG+EL EKL VRPTSETI+ + +WI S
Sbjct: 65 YFPLFIPESYIAKEAEHIEGFAPECAVVTHGGGEELAEKLYVRPTSETIIWASYKKWIQS 124
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EEA +E ++MI IY KFA
Sbjct: 125 YRDLPILINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATKEEASEEVLRMITIYKKFA 184
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
E+ A+PVI GRK++ E FAGA T+ IEAMM D +ALQAGTSH+LGQNF+ AF QF
Sbjct: 185 EEYMALPVIMGRKTESEKFAGADETFCIEAMMQDGKALQAGTSHHLGQNFAKAFDCQFQT 244
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
G+ VW TSW +STR +G +IM H DD GL+LPP++A QVV++PI + +KT VL
Sbjct: 245 SAGELDFVWATSWGVSTRLIGALIMAHSDDRGLVLPPKLASRQVVVIPILR--GDKTAVL 302
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A + L+K GI +D SDQ +PGWKF +E++GIPLRIE+GPRD++ V++RR
Sbjct: 303 EQADAIVCTLKKHGIPAFVDSSDQNSPGWKFAEYELQGIPLRIELGPRDLAGKKCVVARR 362
Query: 441 DVPGKQGKVFG--ISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEA 498
D K SM+ V + L+ IQ L +RA SFR+ V+V SYEE K A
Sbjct: 363 DTLEKTELPLDDTFSMQ-------VSEILNSIQQNLYDRALSFRNEKTVEVKSYEEFKTA 415
Query: 499 ISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNK-------TCFMTGNPAQEV 551
+ G + W +D E K+KEET ATIR P EQ ++ C +G PA
Sbjct: 416 VENG-FVIAHWDGTDETESKIKEETKATIRVLPEEQEYLDRYTMMEPGVCIYSGRPAARK 474
Query: 552 ALFAKSY 558
+FAK+Y
Sbjct: 475 VVFAKAY 481
>sp|A1BHL6|SYP_CHLPD Proline--tRNA ligase OS=Chlorobium phaeobacteroides (strain DSM
266) GN=proS PE=3 SV=1
Length = 481
Score = 526 bits (1355), Expect = e-148, Method: Compositional matrix adjust.
Identities = 257/486 (52%), Positives = 334/486 (68%), Gaps = 17/486 (3%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
IT RS D++ WY+D++ +A+LADY VRG MVIRP GYAIWE +Q L+ FKETGH N
Sbjct: 5 ITTRSADYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQTALDRMFKETGHVNA 64
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP FIP SFI KEA H+EGF+PE A+VT GGG+EL EKL VRPTSETI+ + +WI S
Sbjct: 65 YFPLFIPESFIAKEAEHIEGFAPECAVVTHGGGEELAEKLYVRPTSETIIWSSYKKWIQS 124
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHTAHATPEE+++E ++MI++Y FA
Sbjct: 125 YRDLPILINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATPEESQEEVVRMINVYKTFA 184
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
+ A+PVI G+K+ E FAGA T+ IEAMM D +ALQAGTSHNLGQNF+ AF QF
Sbjct: 185 ENYMALPVIIGKKTDSEKFAGAVDTWCIEAMMQDSKALQAGTSHNLGQNFAKAFDCQFQT 244
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
+G+ +VW TSW +STR +G +IM H DD GL+LPP++A QVVI+PI K +K V
Sbjct: 245 RDGKLDYVWATSWGVSTRLIGALIMAHSDDRGLVLPPKLATRQVVIIPILK--GDKAAVC 302
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A + L +GI +DDS+Q +PGWKF +E++GIPLRIE+GPRD+ +G+ +++RR
Sbjct: 303 EKAHAISRTLSANGIPAFVDDSEQNSPGWKFAEYELQGIPLRIELGPRDIQNGTCIVARR 362
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAIS 500
D K ++ SI E L+ IQ L +RA FR+ + + SSY E +E +
Sbjct: 363 DTLEKTELALDDTLSVSISEI-----LNAIQQNLFDRALEFRNEHTFEASSYSEFREMVE 417
Query: 501 MGKWARGPWSASDADELKVKEETGATIRCFPFEQP--------QGNKTCFMTGNPAQEVA 552
G + W + E K+KEET ATIR P E+P TC +GNPA + A
Sbjct: 418 NG-FVIAHWDGTAETEAKIKEETKATIRVLP-EEPDYISRYAMHEAGTCIYSGNPAAQKA 475
Query: 553 LFAKSY 558
+FAK+Y
Sbjct: 476 VFAKAY 481
>sp|Q72GF9|SYP_THET2 Proline--tRNA ligase OS=Thermus thermophilus (strain HB27 / ATCC
BAA-163 / DSM 7039) GN=proS PE=3 SV=1
Length = 477
Score = 525 bits (1351), Expect = e-148, Method: Compositional matrix adjust.
Identities = 266/484 (54%), Positives = 342/484 (70%), Gaps = 11/484 (2%)
Query: 77 RERVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETG 136
+E+ +TP+SQDF+ WYL+VI AELADYGPVRGT+V+RPYGYAIWE IQ L+ FKETG
Sbjct: 3 KEKGLTPQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETG 62
Query: 137 HSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQ 196
H N YFP FIP SF+ KEA HVEGFSPELA+VT GG+ELEE L VRPTSET++ +M+++
Sbjct: 63 HQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSK 122
Query: 197 WIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIY 256
WI S+RDLP L+NQW NV RWEMRT+PF+RT EFLWQEGHTAHAT EEAE+E +M+ IY
Sbjct: 123 WIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIY 182
Query: 257 TKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGT 316
+ A E+ AIPVI G K++ E FAGA T TIEA+M D +ALQAGTSH LG+NF+ AF
Sbjct: 183 ARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKDGKALQAGTSHYLGENFARAFDI 242
Query: 317 QFTDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEK 376
+F D + Q ++V TSW +S RF+G IIMTHGDD GL+LPPR+APIQVVIVPI+K + +
Sbjct: 243 KFQDRDLQVKYVHTTSWGLSWRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKD-ESR 301
Query: 377 TGVLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVV 436
VL AA ++ LQ G+RV LDD DQ TPG+KF+ WE+KG+P R+E+GP+D+ G V
Sbjct: 302 ERVLEAAQGLRQALQAKGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEQGQAV 361
Query: 437 ISRRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELK 496
++ R + GK+ ++ + L + KL L RA +FR+++ V +YE K
Sbjct: 362 LASR-LGGKE------TLPLAALPEALPGKLVAFHEELYRRALAFREAHTRKVDTYEAFK 414
Query: 497 EAISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQ--EVALF 554
EA+ G +A A E ++EET AT RC PFE C G P+ + +F
Sbjct: 415 EAVQEG-FALAFHCGDKACERLIQEETTATTRCVPFEAEPEEGFCVRCGRPSAYGKRVVF 473
Query: 555 AKSY 558
AK+Y
Sbjct: 474 AKAY 477
>sp|Q5SM28|SYP_THET8 Proline--tRNA ligase OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=proS PE=1 SV=1
Length = 477
Score = 524 bits (1349), Expect = e-148, Method: Compositional matrix adjust.
Identities = 266/484 (54%), Positives = 341/484 (70%), Gaps = 11/484 (2%)
Query: 77 RERVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETG 136
+E+ +TP+SQDF+ WYL+VI AELADYGPVRGT+V+RPYGYAIWE IQ L+ FKETG
Sbjct: 3 KEKGLTPQSQDFSEWYLEVIQKAELADYGPVRGTIVVRPYGYAIWENIQQVLDRMFKETG 62
Query: 137 HSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQ 196
H N YFP FIP SF+ KEA HVEGFSPELA+VT GG+ELEE L VRPTSET++ +M+++
Sbjct: 63 HQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSK 122
Query: 197 WIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIY 256
WI S+RDLP L+NQW NV RWEMRT+PF+RT EFLWQEGHTAHAT EEAE+E +M+ IY
Sbjct: 123 WIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIY 182
Query: 257 TKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGT 316
+ A E+ AIPVI G K++ E FAGA T TIEA+M D +ALQAGTSH LG+NF+ AF
Sbjct: 183 ARLAREYAAIPVIEGLKTEKEKFAGAVYTTTIEALMKDGKALQAGTSHYLGENFARAFDI 242
Query: 317 QFTDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEK 376
+F D + Q ++V TSW +S RF+G IIMTHGDD GL+LPPR+APIQVVIVPI+K + +
Sbjct: 243 KFQDRDLQVKYVHTTSWGLSWRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKD-ESR 301
Query: 377 TGVLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVV 436
VL AA ++ L G+RV LDD DQ TPG+KF+ WE+KG+P R+E+GP+D+ G V
Sbjct: 302 ERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAV 361
Query: 437 ISRRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELK 496
++ R + GK+ ++ + L + KLD L RA +FR+ + V +YE K
Sbjct: 362 LASR-LGGKE------TLPLAALPEALPGKLDAFHEELYRRALAFREDHTRKVDTYEAFK 414
Query: 497 EAISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQ--EVALF 554
EA+ G +A A E ++EET AT RC PFE C G P+ + +F
Sbjct: 415 EAVQEG-FALAFHCGDKACERLIQEETTATTRCVPFEAEPEEGFCVRCGRPSAYGKRVVF 473
Query: 555 AKSY 558
AK+Y
Sbjct: 474 AKAY 477
>sp|A8MLB3|SYP_ALKOO Proline--tRNA ligase OS=Alkaliphilus oremlandii (strain OhILAs)
GN=proS PE=3 SV=1
Length = 480
Score = 520 bits (1338), Expect = e-146, Method: Compositional matrix adjust.
Identities = 252/479 (52%), Positives = 326/479 (68%), Gaps = 11/479 (2%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
ITP DF WY DVI +L DY PV+G MVI+PYGYAIWE IQ+Y++ +FKETGH N
Sbjct: 12 ITPMEVDFAQWYTDVIKKTDLVDYSPVKGFMVIKPYGYAIWENIQNYMDKRFKETGHKNC 71
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP IP S ++KEA HVEGF+PE+A VT GG +EL E+L VRPTSETI+ M+++W+ S
Sbjct: 72 YFPLLIPESLLKKEAEHVEGFAPEVAWVTHGGNEELAERLCVRPTSETIICEMYSKWLTS 131
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEA+ E +QM++IY + A
Sbjct: 132 YRDLPFLYNQWCSVVRWEKSTRPFLRTSEFLWQEGHTLHETYEEAQAETLQMLNIYRETA 191
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
A+PV+ G+KS+ E FAGA TYT+EA+M D +ALQAGTSHNLGQ+F+ AF ++D
Sbjct: 192 ENLLAMPVVIGQKSEKEKFAGAYATYTMEALMHDGKALQAGTSHNLGQHFTTAFDITYSD 251
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
NG+ +H + TSW +STR +GGIIM HGD+ GL+LPP IAP QVVIVP+ A K GVL
Sbjct: 252 RNGELKHPYHTSWGVSTRLIGGIIMVHGDNRGLVLPPGIAPTQVVIVPV---ASHKEGVL 308
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A ++ L K RV+LDD D +PGWKFN WEMKG+P+RIEIGPRD+ + ++ RR
Sbjct: 309 DKANELRDRL-KDKFRVELDDRDNYSPGWKFNEWEMKGVPIRIEIGPRDIENNQAMLFRR 367
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAIS 500
D K +S++ LE V+ L++I + LL +A RD V +++E+KE +
Sbjct: 368 DELEKD----AVSLDD--LEEAVEKLLEDINNNLLYKAKMMRDEKTYIVKTFDEMKEVME 421
Query: 501 MG-KWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKSY 558
+ + + W A E VK ETG TIRC PFEQ TC G A+ + AK+Y
Sbjct: 422 IKPGFVKAMWCGERACEEHVKAETGVTIRCIPFEQENLGHTCAFCGKEAKHMVYLAKAY 480
>sp|B4S9D5|SYP_PROA2 Proline--tRNA ligase OS=Prosthecochloris aestuarii (strain DSM 271
/ SK 413) GN=proS PE=3 SV=1
Length = 481
Score = 518 bits (1335), Expect = e-146, Method: Compositional matrix adjust.
Identities = 253/488 (51%), Positives = 337/488 (69%), Gaps = 21/488 (4%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
IT R D++ WY+D++ +A+LADY VRG M+IRP GYAIWE +Q L+ FK TGH N
Sbjct: 5 ITLRETDYSQWYIDLVRSAKLADYSDVRGCMIIRPNGYAIWEKMQAALDAMFKATGHVNA 64
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP FIP SFI+KEA H+EGF+PE A+VT GGG++L E L VRPTSETI+ + +WI S
Sbjct: 65 YFPLFIPESFIKKEAEHIEGFAPECAVVTHGGGEQLAENLYVRPTSETIIWSSYKKWIQS 124
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EA++E M+MI++Y FA
Sbjct: 125 YRDLPILINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATSTEAQEEVMRMINVYKTFA 184
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
E+ A+PVI GRK++ E FAGA T+ IEAMM DK+ALQAGTSHNLGQNF+ AF +F
Sbjct: 185 EEYMALPVIMGRKTESEKFAGAVETWCIEAMMQDKKALQAGTSHNLGQNFAKAFDCRFQS 244
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
+ G ++VW TSW +STR +G +IM H DD GL+LPP++A QVVI+PI K + + V+
Sbjct: 245 KEGALEYVWATSWGVSTRLIGALIMAHSDDRGLVLPPKLATRQVVIIPILK--GDISAVI 302
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A S L + GI +DDSDQ +PGWKF +E++GIP+R+E+GPRD+ S + + +RR
Sbjct: 303 EKARSIAAELNQKGIAAFVDDSDQNSPGWKFAEYELQGIPVRLELGPRDIQSSTCIAARR 362
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAIS 500
D G++ K + ++ S+ + + L+ IQ+ L RA SFR+ + ++VSSY E K I
Sbjct: 363 DT-GEKSK---LQLDSSLADQ-INSLLESIQTNLFNRALSFREKHTLEVSSYSEFKANID 417
Query: 501 MGKWARGPWSASDADELKVKEETGATIRCFP----------FEQPQGNKTCFMTGNPAQE 550
G + W +D E K+KEET ATIR P +QP TC +G P+
Sbjct: 418 NG-FLVAHWDGTDETEAKIKEETKATIRVMPADPEMVLRYGMDQP---GTCIYSGKPSTR 473
Query: 551 VALFAKSY 558
+FAK+Y
Sbjct: 474 KVIFAKAY 481
>sp|B9LC55|SYP_CHLSY Proline--tRNA ligase OS=Chloroflexus aurantiacus (strain ATCC 29364
/ DSM 637 / Y-400-fl) GN=proS PE=3 SV=1
Length = 480
Score = 518 bits (1334), Expect = e-146, Method: Compositional matrix adjust.
Identities = 258/481 (53%), Positives = 346/481 (71%), Gaps = 7/481 (1%)
Query: 80 VITPRSQDFNAWYLDVISNAELADYGPV-RGTMVIRPYGYAIWEAIQDYLNVKFKETGHS 138
VIT RS D+N WYLD++ A+LA+ V RG +V++ +G+AIWE +Q L+ + K TGH+
Sbjct: 5 VITQRSVDYNQWYLDIVREADLAEVAEVVRGCIVVKAHGWAIWELMQRALDDRIKATGHA 64
Query: 139 NMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWI 198
N+ FP IP SFI KEA HVEGF+PE+A VT GG+EL E ++RPTSETI+ + +++WI
Sbjct: 65 NVQFPLLIPKSFIMKEAEHVEGFAPEVAEVTRAGGEELAEPYIIRPTSETIIGYFYSKWI 124
Query: 199 HSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMI-DIYT 257
SYRDLPLL NQWANV RWEMRT+PF+RT EF WQEGHTAHAT EAE+E ++++ D+Y
Sbjct: 125 RSYRDLPLLYNQWANVMRWEMRTRPFLRTAEFWWQEGHTAHATEAEAEEETLRILHDVYA 184
Query: 258 KFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQ 317
F + A+PVI G K++ E F GA R+Y IEAMM D RALQAGTSHNLGQNF+ AF
Sbjct: 185 DFVEKEMAVPVIRGLKTEKEKFPGALRSYCIEAMMQDGRALQAGTSHNLGQNFARAFDIT 244
Query: 318 FTDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKT 377
FTD+N Q+ W TSW +STR +G +IMTH DD GL+LPPR+APIQVV+VPI+K DE+
Sbjct: 245 FTDQNNTIQYAWTTSWGVSTRLIGALIMTHSDDEGLVLPPRLAPIQVVVVPIYKN-DEER 303
Query: 378 GVLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVI 437
++ AA+ K +R K+DD D +PG+KFN WE+KG+P+RIE+GP+DV+ +V +
Sbjct: 304 SLVMAAVEQMTAAWKGRLRFKVDDRDNYSPGYKFNEWELKGVPVRIEVGPKDVAKETVAL 363
Query: 438 SRRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKE 497
+RRD+PGK GK F + + L ++ L+E+Q+AL +RA +FR+++ DV+SY+ELKE
Sbjct: 364 ARRDIPGKAGKSF---VPQAGLTERIEALLNEMQTALFQRALAFREAHTADVTSYDELKE 420
Query: 498 AISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKS 557
I G +AR W+ ADE +++EET ATIRC P EQP C TG +FA++
Sbjct: 421 QIERG-FARAYWAGDTADEKRIQEETRATIRCIPLEQPGSVGRCVYTGRETDRQVIFARA 479
Query: 558 Y 558
Y
Sbjct: 480 Y 480
>sp|A9W9Q2|SYP_CHLAA Proline--tRNA ligase OS=Chloroflexus aurantiacus (strain ATCC 29366
/ DSM 635 / J-10-fl) GN=proS PE=3 SV=1
Length = 480
Score = 518 bits (1334), Expect = e-146, Method: Compositional matrix adjust.
Identities = 258/481 (53%), Positives = 346/481 (71%), Gaps = 7/481 (1%)
Query: 80 VITPRSQDFNAWYLDVISNAELADYGPV-RGTMVIRPYGYAIWEAIQDYLNVKFKETGHS 138
VIT RS D+N WYLD++ A+LA+ V RG +V++ +G+AIWE +Q L+ + K TGH+
Sbjct: 5 VITQRSVDYNQWYLDIVREADLAEVAEVVRGCIVVKAHGWAIWELMQRALDDRIKATGHA 64
Query: 139 NMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWI 198
N+ FP IP SFI KEA HVEGF+PE+A VT GG+EL E ++RPTSETI+ + +++WI
Sbjct: 65 NVQFPLLIPKSFIMKEAEHVEGFAPEVAEVTRAGGEELAEPYIIRPTSETIIGYFYSKWI 124
Query: 199 HSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMI-DIYT 257
SYRDLPLL NQWANV RWEMRT+PF+RT EF WQEGHTAHAT EAE+E ++++ D+Y
Sbjct: 125 RSYRDLPLLYNQWANVMRWEMRTRPFLRTAEFWWQEGHTAHATEAEAEEETLRILHDVYA 184
Query: 258 KFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQ 317
F + A+PVI G K++ E F GA R+Y IEAMM D RALQAGTSHNLGQNF+ AF
Sbjct: 185 DFVEKEMAVPVIRGLKTEKEKFPGALRSYCIEAMMQDGRALQAGTSHNLGQNFARAFDIT 244
Query: 318 FTDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKT 377
FTD+N Q+ W TSW +STR +G +IMTH DD GL+LPPR+APIQVV+VPI+K DE+
Sbjct: 245 FTDQNNTIQYAWTTSWGVSTRLIGALIMTHSDDEGLVLPPRLAPIQVVVVPIYKN-DEER 303
Query: 378 GVLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVI 437
++ AA+ K +R K+DD D +PG+KFN WE+KG+P+RIE+GP+DV+ +V +
Sbjct: 304 SLVMAAVEQMTAAWKGRLRFKVDDRDNYSPGYKFNEWELKGVPVRIEVGPKDVAKETVAL 363
Query: 438 SRRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKE 497
+RRD+PGK GK F + + L ++ L+E+Q+AL +RA +FR+++ DV+SY+ELKE
Sbjct: 364 ARRDIPGKAGKSF---VPQAGLTERIEALLNEMQTALFQRALAFREAHTADVTSYDELKE 420
Query: 498 AISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKS 557
I G +AR W+ ADE +++EET ATIRC P EQP C TG +FA++
Sbjct: 421 QIERG-FARAYWAGDTADEKRIQEETRATIRCIPLEQPGSVGRCVYTGRETDRQVIFARA 479
Query: 558 Y 558
Y
Sbjct: 480 Y 480
>sp|Q9L4Q8|SYP_CLOSD Proline--tRNA ligase OS=Clostridium sticklandii (strain ATCC 12662
/ DSM 519 / JCM 1433 / NCIB 10654) GN=proS PE=1 SV=1
Length = 481
Score = 516 bits (1330), Expect = e-145, Method: Compositional matrix adjust.
Identities = 251/479 (52%), Positives = 320/479 (66%), Gaps = 10/479 (2%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
IT +DF WY DVI+ +L DY PV+G MVI+PYGYAIWE IQ +L+ +FKETGH N
Sbjct: 12 ITNMDEDFPQWYTDVITKTDLVDYSPVKGFMVIKPYGYAIWENIQAFLDRRFKETGHQNC 71
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP IP S + KE HVEGF+PE+A VT GG ++L E+L VRPTSETI+ M+++W+ S
Sbjct: 72 YFPLLIPESLLNKEKEHVEGFAPEVAWVTHGGSEKLAERLCVRPTSETIICSMYSKWLTS 131
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YR+LP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEA+ E +QM+ IY + A
Sbjct: 132 YRELPYLYNQWCSVVRWEKSTRPFLRTSEFLWQEGHTLHETAEEAQAETLQMLAIYKEMA 191
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
+ AIPV+ GRKS E FAGA+ TYTIEA+M D +ALQ+GTSHNL Q+F+ AF F
Sbjct: 192 EDLLAIPVVDGRKSDRERFAGAAATYTIEALMHDGKALQSGTSHNLAQHFTKAFDITFQG 251
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
G+ ++ TSW STR +GGIIM HGD+ GL+LPPR+AP QVVI+PI A K GVL
Sbjct: 252 RTGELEYPHHTSWGASTRLIGGIIMVHGDNRGLVLPPRVAPTQVVIIPI---AQNKEGVL 308
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A K+ L+ GIRV LDD +PGWKFN +EMKG+PLR+EIGPRD+ + +I+RR
Sbjct: 309 DKAYEIKKELEAKGIRVTLDDDTNYSPGWKFNQYEMKGVPLRLEIGPRDIENNVAMIARR 368
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELK-EAI 499
D K S + VK+ LD + + +LERA + RDS YEE K + I
Sbjct: 369 DTLSKD------SYSLDNIGDTVKNLLDTVHTDMLERARAHRDSKTFTFKDYEEFKRKMI 422
Query: 500 SMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKSY 558
+A+G W + E K+KE+TG TIRC PF Q +TC G PA+ + AK+Y
Sbjct: 423 ETPGFAKGMWCGEEECEAKIKEDTGVTIRCIPFVQENLGETCQFCGKPAKHMVYLAKAY 481
>sp|Q8KCD1|SYP_CHLTE Proline--tRNA ligase OS=Chlorobium tepidum (strain ATCC 49652 / DSM
12025 / TLS) GN=proS PE=3 SV=1
Length = 481
Score = 514 bits (1323), Expect = e-144, Method: Compositional matrix adjust.
Identities = 252/485 (51%), Positives = 331/485 (68%), Gaps = 15/485 (3%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
IT R +D++ WY+D++ +A+LADY VRG MVIRP GYAIWE +Q L+ FK+TGH N
Sbjct: 5 ITSRQEDYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQAALDGMFKQTGHVNA 64
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP FIP SFI KEA H+EGF+PE A+VT GGG+EL EKL VRPTSETI+ + +WI S
Sbjct: 65 YFPMFIPESFIAKEAEHIEGFAPECAVVTHGGGEELAEKLYVRPTSETIIWSSYKKWIQS 124
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHTAHATPEEA++E ++MI+IY FA
Sbjct: 125 YRDLPILINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATPEEAQEEVIRMINIYRTFA 184
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
E+ A+PVI G+KS+ E FAGA TY IEAMM D +ALQAGTSHNLGQNF+ AF QF
Sbjct: 185 EEYMAMPVIVGKKSESEKFAGADATYCIEAMMQDGKALQAGTSHNLGQNFAKAFDCQFQT 244
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
++G +VW TSW +STR +G +IM H DD GL+LPP++A QVVI+PI K K V
Sbjct: 245 KDGVLDYVWATSWGVSTRLIGALIMAHSDDKGLVLPPKLASRQVVIIPILK--GNKDEVR 302
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
+ A + L + GI +DDS+ +PGWKF +E++GIP+RIE+GPRD+ G +++RR
Sbjct: 303 ARARFIAKTLNRHGIPTFVDDSENNSPGWKFAEYELQGIPVRIELGPRDLEQGKCIVARR 362
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAIS 500
D K + + +I E L+ IQ L +RA FR N V+ +++EE K ++
Sbjct: 363 DTFEKTELLLDDELTINIEEI-----LNNIQQNLYDRALQFRLDNTVEATTWEEFKASVE 417
Query: 501 MGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNK-------TCFMTGNPAQEVAL 553
G + W + E +KEET ATIR P ++ + TC +G PA + +
Sbjct: 418 KG-FVIAHWDGTHETEALIKEETKATIRVIPTDEEYRQQYNMDEPGTCIRSGKPAAQKVV 476
Query: 554 FAKSY 558
FAK+Y
Sbjct: 477 FAKAY 481
>sp|Q3B2T0|SYP_PELLD Proline--tRNA ligase OS=Pelodictyon luteolum (strain DSM 273)
GN=proS PE=3 SV=1
Length = 481
Score = 511 bits (1316), Expect = e-144, Method: Compositional matrix adjust.
Identities = 257/485 (52%), Positives = 336/485 (69%), Gaps = 15/485 (3%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
IT R++D++ WY+D++ +A+LADY VRG MVIRP GYAIWE +Q L+ FKETGH N
Sbjct: 5 ITARNEDYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAIWEKMQAALDRMFKETGHVNA 64
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP FIP SFI KEA H+EGF+PE A+VT GGG+EL EKL VRPTSETI+ + +WI S
Sbjct: 65 YFPLFIPESFIAKEAEHIEGFAPECAVVTHGGGEELAEKLYVRPTSETIIWSSYKKWIQS 124
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHTAHATPEE+++E M+MI++Y FA
Sbjct: 125 YRDLPILINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATPEESQEEVMRMINVYRTFA 184
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
E+ A+PVI GRK+ E FAGA TY IEAMM D +ALQAGTSHNLGQNF+ AF QF
Sbjct: 185 EEYMAMPVIMGRKTDSEKFAGAEETYCIEAMMQDGKALQAGTSHNLGQNFAKAFDCQFQT 244
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
++ + +VW TSW +STR +G +IM H DD GL+LPP++A QVVI+PI + +K VL
Sbjct: 245 KDSRLDYVWATSWGVSTRLIGALIMAHSDDRGLVLPPKLASRQVVIIPILR--GDKAAVL 302
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A + L+ +GI +D S+Q +PGWKF +E++GIP+RIE+GPRD+ G + +RR
Sbjct: 303 EQADAMAASLKAAGIPAFVDGSEQNSPGWKFAEYELQGIPVRIEVGPRDIEKGICIAARR 362
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAIS 500
D K G L V++ LD +Q + ++A FR+ N V+ SSYEE K A+
Sbjct: 363 DTLEKSELQLG-----ETLPGAVQEILDAMQKDMYQKALLFREENTVEASSYEEFKAAVE 417
Query: 501 MGKWARGPWSASDADELKVKEETGATIRCFP-----FEQPQGNK--TCFMTGNPAQEVAL 553
G + W + E K+KEET ATIR P E+ + N+ TC +G PA + +
Sbjct: 418 KG-FVIAHWDGTAETEEKIKEETKATIRVLPEEDGYIERYRMNEPGTCIYSGKPAAQKVV 476
Query: 554 FAKSY 558
FAK+Y
Sbjct: 477 FAKAY 481
>sp|Q3ASP3|SYP_CHLCH Proline--tRNA ligase OS=Chlorobium chlorochromatii (strain CaD3)
GN=proS PE=3 SV=1
Length = 481
Score = 511 bits (1315), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/485 (51%), Positives = 333/485 (68%), Gaps = 15/485 (3%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
IT RS+D++ WY+D++ +A+LADY V+G MVIRP GYAIWE +Q L+ FKETGH N
Sbjct: 5 ITSRSEDYSQWYIDLVRSAKLADYADVKGCMVIRPNGYAIWEKMQAALDRMFKETGHVNA 64
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP FIP SFI KEA H+EGF+PE A+VT GGG+EL EKL VRPTSETI+ + +WI S
Sbjct: 65 YFPLFIPESFIAKEAEHIEGFAPECAVVTHGGGQELAEKLYVRPTSETIIWSSYKKWIQS 124
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLPLL+NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EEA++E ++MI++Y FA
Sbjct: 125 YRDLPLLINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATHEEAQEEVLRMINVYKTFA 184
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
E+ A+PVI G+KS E FAGA T+ IEAMM D +ALQAGTSH+LGQNF+ AF +F
Sbjct: 185 EEYMALPVILGKKSDSEKFAGALETFCIEAMMQDGKALQAGTSHDLGQNFAKAFDCKFQT 244
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
++VW TSW +STR +G +IM H DD GL+LPPR+A QVVI+PI K +K VL
Sbjct: 245 HEKTLEYVWATSWGVSTRLIGALIMAHSDDRGLVLPPRLATRQVVIIPILK--GDKESVL 302
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A + L K+GI +D S+Q +PGWKF +E++GIPLR+E+GPRD+ +G V++RR
Sbjct: 303 HHADNIAAALTKAGISAFVDSSEQNSPGWKFAEYELQGIPLRLELGPRDIKNGMCVVARR 362
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAIS 500
D K I+++ ++ + + + L++IQ + + A FR V V++Y++ K A+
Sbjct: 363 DTLEKT----EIALDDRLVMS-INEILNDIQQDMFDAALRFRQERTVQVNNYDDFKVAVE 417
Query: 501 MGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNK-------TCFMTGNPAQEVAL 553
G + W + E K+KEET ATIR P E + TC +G P+ +
Sbjct: 418 KG-FVIAHWDGTVETEAKIKEETKATIRVLPQEDDYCDTYGINEPGTCIYSGKPSARKVV 476
Query: 554 FAKSY 558
FAK+Y
Sbjct: 477 FAKAY 481
>sp|B8G3V5|SYP_CHLAD Proline--tRNA ligase OS=Chloroflexus aggregans (strain MD-66 / DSM
9485) GN=proS PE=3 SV=1
Length = 480
Score = 511 bits (1315), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/481 (53%), Positives = 345/481 (71%), Gaps = 7/481 (1%)
Query: 80 VITPRSQDFNAWYLDVISNAELADYGPV-RGTMVIRPYGYAIWEAIQDYLNVKFKETGHS 138
VIT RS D+N WYLD++ A+LA+ V RG +V++ +G+AIWE +Q L+ + K TGH+
Sbjct: 5 VITQRSVDYNQWYLDIVREADLAEVAEVVRGCIVVKAHGWAIWELMQRALDDRIKATGHA 64
Query: 139 NMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWI 198
N+ FP IP SFI KEA HVEGF+PE+A VT GG+EL E V+RPTSETI+ + +++WI
Sbjct: 65 NVQFPLLIPKSFIMKEAEHVEGFAPEVAEVTRAGGEELAEPYVIRPTSETIIGYFYSKWI 124
Query: 199 HSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMI-DIYT 257
SYRDLPLL NQWANV RWEMRT+PF+RT EF WQEGHTAHAT EAE+E ++++ ++Y
Sbjct: 125 RSYRDLPLLYNQWANVMRWEMRTRPFLRTAEFWWQEGHTAHATEAEAEEETLRILHEVYA 184
Query: 258 KFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQ 317
F + A+PVI G K++ E F GA R+Y IEAMM D RALQAGTSHNLGQNF+ AF
Sbjct: 185 DFVEKEMAVPVIRGLKTEKEKFPGALRSYCIEAMMQDGRALQAGTSHNLGQNFARAFDIT 244
Query: 318 FTDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKT 377
FTD++ Q+ W TSW +STR +G +IMTH DD GL+LPPR+APIQVV+VPI+K +E++
Sbjct: 245 FTDQHNTIQYAWTTSWGVSTRLIGALIMTHSDDEGLVLPPRLAPIQVVVVPIYKNDEERS 304
Query: 378 GVLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVI 437
V+ A++ K +R K+DD D +PG+KFN WE+KG+P+RIEIGP+DV+ +V +
Sbjct: 305 AVME-AVNRMTAAWKGRLRFKVDDRDTYSPGYKFNEWELKGVPVRIEIGPKDVAKETVAL 363
Query: 438 SRRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKE 497
+RRD+PGK GK F + + L ++ L E+Q+ L +RA +FR++ DV++Y+ELKE
Sbjct: 364 ARRDMPGKAGKSF---VPQAGLTERIEALLAEMQTGLFQRALAFREARTADVTTYDELKE 420
Query: 498 AISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKS 557
I G +AR W+ S ADE +++EET ATIRC P EQP C TG +FA++
Sbjct: 421 QIERG-FARAYWAGSTADEKRIQEETRATIRCIPLEQPGTVGRCVYTGRETDRQVIFARA 479
Query: 558 Y 558
Y
Sbjct: 480 Y 480
>sp|B4SG51|SYP_PELPB Proline--tRNA ligase OS=Pelodictyon phaeoclathratiforme (strain DSM
5477 / BU-1) GN=proS PE=3 SV=1
Length = 481
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 250/485 (51%), Positives = 328/485 (67%), Gaps = 15/485 (3%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
IT RS+D++ WY+D++ +A+LADY VRG M IRP GYAIWE +Q L+ FKETGH N
Sbjct: 5 ITSRSEDYSQWYIDLVRSAKLADYADVRGCMDIRPNGYAIWEKMQAALDRMFKETGHVNA 64
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP FIP SFI KEA H+EGF+PE A+VT GGG+EL EKL +RPTSETI+ + +WI S
Sbjct: 65 YFPLFIPESFIAKEAEHIEGFAPECAVVTHGGGEELAEKLYIRPTSETIIWSSYKKWIQS 124
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHTAHA PEE+++E ++MI++Y FA
Sbjct: 125 YRDLPILINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHANPEESQEEVLRMINVYKTFA 184
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
E+ A+PVI G+K+ E FAGA T+ IEAMM D +ALQAGTSHNLGQNF+ AF QF
Sbjct: 185 EEYMAMPVIMGKKTDNEKFAGAVDTWCIEAMMQDSKALQAGTSHNLGQNFAKAFDCQFQT 244
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
++G +VW TSW +STR +G +IM H DD GL+LPP++A QVVI+PI + +K V+
Sbjct: 245 KDGVLDYVWATSWGVSTRLIGALIMAHSDDRGLVLPPKLATRQVVIIPILR--GDKAAVI 302
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A + + L K+GI +D S+Q +PGWKF +E++GIP+RIE+GPRD+ G + +RR
Sbjct: 303 ERANALAQELNKNGIPSFVDSSEQNSPGWKFAEYELQGIPIRIELGPRDIEKGICIAARR 362
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAIS 500
D K ++ I E L+ IQ ++ ERA FR + +V SYEE K A+
Sbjct: 363 DTLEKTELALDETLPDQISEI-----LNTIQESMFERALQFRTEHTFEVQSYEEFKVAVE 417
Query: 501 MGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNK-------TCFMTGNPAQEVAL 553
G + W + E K+K ET ATIR P E + TC +G PA +
Sbjct: 418 KG-FVIAHWDGTAETEAKIKAETKATIRVLPEEADYIAQYRIDEPGTCIYSGKPAARKVV 476
Query: 554 FAKSY 558
FAK+Y
Sbjct: 477 FAKAY 481
>sp|A6LAP3|SYP_PARD8 Proline--tRNA ligase OS=Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC 11152) GN=proS PE=3 SV=1
Length = 493
Score = 507 bits (1305), Expect = e-142, Method: Compositional matrix adjust.
Identities = 245/492 (49%), Positives = 327/492 (66%), Gaps = 20/492 (4%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
+TPRS +++ WY D++ A+LA+ VRG MVI+PYGYAIWE +Q L+ FKETGH N
Sbjct: 8 LTPRSVNYSQWYQDLVIKADLAENSAVRGCMVIKPYGYAIWEKMQRILDDMFKETGHVNA 67
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVT--------------IGGGKELEEKLVVRPTS 186
YFP IP SF+ KEA HVEGF+ E A+VT + +LEE+L++RPTS
Sbjct: 68 YFPLLIPKSFLSKEAEHVEGFAKECAVVTHYRLKTNHDGTGVVVDPAAKLEEELIIRPTS 127
Query: 187 ETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAE 246
ETI+ + + WI SYRDLP+L NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EEAE
Sbjct: 128 ETIIWNTYRNWIQSYRDLPILCNQWANVMRWEMRTRLFLRTAEFLWQEGHTAHATREEAE 187
Query: 247 KEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNL 306
EA +M D+Y FA + A+PVI G KS+ E FAGA TYTIEAMM D +ALQAGTSH L
Sbjct: 188 IEAKKMQDVYANFAENYMAMPVIKGVKSESERFAGALDTYTIEAMMQDGKALQAGTSHFL 247
Query: 307 GQNFSLAFGTQFTDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVI 366
GQNF AF F D+NG+ + W TSW +STR +G +IM+H DD GL+LPP +APIQVVI
Sbjct: 248 GQNFGKAFDVTFIDKNGKSDYAWATSWGVSTRLIGALIMSHSDDNGLVLPPHLAPIQVVI 307
Query: 367 VPIWKKADEKTGVLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIG 426
VPI++ A++ T + L+ GI VK DD+D + PGWKF +E+KG+P+R+ +G
Sbjct: 308 VPIYRSAEQLTQISEKVAGIVAKLKALGISVKYDDADNKKPGWKFAEYELKGVPVRLAMG 367
Query: 427 PRDVSSGSVVISRRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNI 486
RD+ + ++ + RRD K+ ++ +E YVK+ L+EIQ+ + ++A R++NI
Sbjct: 368 GRDLENNTIEVMRRDTLEKE------TITCDGIEEYVKNLLEEIQANIFKKAYDHREANI 421
Query: 487 VDVSSYEELKEAISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGN 546
++V +YEE KE I G + W + E +K ET ATIRC P + C +TG
Sbjct: 422 INVDTYEEFKEKIEDGVFIMAHWDGTPETEELIKNETKATIRCIPLAGDKTPGKCMVTGK 481
Query: 547 PAQEVALFAKSY 558
P+ LFA++Y
Sbjct: 482 PSACRVLFARAY 493
>sp|B2A5T8|SYP_NATTJ Proline--tRNA ligase OS=Natranaerobius thermophilus (strain ATCC
BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=proS PE=3 SV=1
Length = 483
Score = 504 bits (1297), Expect = e-142, Method: Compositional matrix adjust.
Identities = 246/490 (50%), Positives = 335/490 (68%), Gaps = 14/490 (2%)
Query: 74 RGNRERV--ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVK 131
+ N E V ITP+S+D++ WYLDVI +L DY PV+G MVIRPYGYAIWE +++ L+ +
Sbjct: 3 KNNEEFVKEITPQSEDYSQWYLDVIKKTKLVDYAPVKGCMVIRPYGYAIWEKMKEGLDRR 62
Query: 132 FKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVN 191
KETGH N YFP FIP S ++KEA HVEGF+PE+A +T GG +EL E L VRPTSE +
Sbjct: 63 IKETGHENAYFPLFIPESLLQKEADHVEGFAPEVAWITKGGDEELSESLAVRPTSEAMFG 122
Query: 192 HMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQ 251
M++ WI S+RDLP+L+NQWANV RWE TKPF+RT EFLWQEGHTAH T E+AE+EA+Q
Sbjct: 123 EMYSDWIQSWRDLPVLINQWANVVRWEKSTKPFLRTSEFLWQEGHTAHRTEEDAEEEALQ 182
Query: 252 MIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFS 311
M+D+Y F AIPV+ G KS+ E FAGA RT+ IEA+M D RALQAGTSHNLGQ+F+
Sbjct: 183 MLDVYKDFVENDMAIPVLNGLKSEKEKFAGALRTFCIEALMSDGRALQAGTSHNLGQHFA 242
Query: 312 LAFGTQFTDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWK 371
F F D++ +R++VWQTSW +STR +G +IM HGD+ GL +PP++AP Q+V+VPI
Sbjct: 243 KVFDITFLDQDDERKYVWQTSWGVSTRLIGALIMVHGDNRGLKIPPKVAPHQLVMVPITP 302
Query: 372 KADEKTGVLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVS 431
K ++ VL + + L K RVKLD+ ++ TPGWKFN WEMKG+P+R+EIGP+D+
Sbjct: 303 KK-QREQVLEESDKLYQEL-KDKFRVKLDNREEHTPGWKFNEWEMKGVPIRLEIGPKDIE 360
Query: 432 SGSVVISRRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSS 491
VV+ RRD K + ++ L +++ +++IQ+ +L+ A +F + N SS
Sbjct: 361 KDQVVLVRRDTDEK------MFVKRDELIDKLEELIEDIQNKMLQTAKNFLEENTHTASS 414
Query: 492 YEELKEAISMGK-WARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTG--NPA 548
+EL + + + + W + A E KVK++T ATIR PFE G +C G N
Sbjct: 415 LDELGQILEQKRGMIKAYWCGNQACEEKVKDDTKATIRVIPFEAETGG-SCIACGYHNDD 473
Query: 549 QEVALFAKSY 558
+ FA++Y
Sbjct: 474 NKEVFFARAY 483
>sp|A0Q2I3|SYP_CLONN Proline--tRNA ligase OS=Clostridium novyi (strain NT) GN=proS PE=3
SV=1
Length = 478
Score = 503 bits (1296), Expect = e-141, Method: Compositional matrix adjust.
Identities = 245/479 (51%), Positives = 321/479 (67%), Gaps = 12/479 (2%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
ITP +DF WY D++ AEL DY V+G M+IRPYGYAIWE IQ YL+ KFKETGH N+
Sbjct: 11 ITPMDEDFAKWYTDIVKKAELVDYASVKGCMIIRPYGYAIWENIQKYLDTKFKETGHENV 70
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
Y P FIP S ++KE HVEGF+PE+A VT GG L E+L VRPTSET+ + + I S
Sbjct: 71 YMPMFIPESLLQKEKDHVEGFAPEVAWVTQGGNDTLAERLCVRPTSETLFCDHYAKIIQS 130
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
+ DLP NQW +V RWE T+PF+RT EFLWQEGHTAHAT EE+ KE + M+++Y F
Sbjct: 131 HNDLPKKYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTAHATAEESAKETIDMLNVYANFC 190
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
AIPVI G+K++ E FAGA TYTIE++M D +ALQ+GTSHN G NFS AF Q+ D
Sbjct: 191 ENVLAIPVIKGQKTEKEKFAGAKATYTIESLMHDGKALQSGTSHNFGDNFSKAFNIQYND 250
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
+N Q Q+V QTSW ++TR +G IIM HGDD+GL LPPRIAP+QVVIVPI A K GVL
Sbjct: 251 KNSQLQYVHQTSWGVTTRLIGAIIMVHGDDSGLKLPPRIAPLQVVIVPI---AQHKEGVL 307
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A ++ + K RVK+D SD + PGWKFN +EMKG+P+R+E+GP+D+ + VV+ RR
Sbjct: 308 DKAEELRQRIAKVA-RVKVDSSD-KMPGWKFNEYEMKGVPVRLEVGPKDIENNQVVLVRR 365
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKE-AI 499
D + K+F +SM+ LE + + LDEI +++LE A + RD + + +E KE A
Sbjct: 366 DT---REKIF-VSMDE--LETKIPELLDEIHNSMLEHARTHRDEHTYTAKTLDEFKEIAD 419
Query: 500 SMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKSY 558
+ + + W A E K+KE G + RC PFEQ + C G A+ + + K+Y
Sbjct: 420 TKPGFIKAMWCGDTACEEKLKEVAGVSSRCMPFEQEEITDKCICCGKEAKHMVYWGKAY 478
>sp|B8I5R4|SYP_CLOCE Proline--tRNA ligase OS=Clostridium cellulolyticum (strain ATCC
35319 / DSM 5812 / JCM 6584 / H10) GN=proS PE=3 SV=1
Length = 478
Score = 502 bits (1293), Expect = e-141, Method: Compositional matrix adjust.
Identities = 248/479 (51%), Positives = 323/479 (67%), Gaps = 12/479 (2%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
IT + DF WY DVI AEL DY VRG MVI+PYGYAIWE IQ L+ +FKETGH N+
Sbjct: 11 ITSMNDDFGQWYTDVIKKAELVDYSSVRGCMVIKPYGYAIWENIQKSLDTRFKETGHENV 70
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
Y P FIP S + KE HVEGF+PE+A VT GG ++L E+L VRPTSET+ ++ I S
Sbjct: 71 YMPMFIPESLLLKEKEHVEGFAPEVAWVTHGGDEKLTERLCVRPTSETLFCEHYSNSIQS 130
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLP L NQW +V RWE T+PF+RTLEFLWQEGHTAHAT EEA++E ++M+++Y
Sbjct: 131 YRDLPKLYNQWCSVVRWEKTTRPFLRTLEFLWQEGHTAHATAEEAQEETIRMLNVYADVL 190
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
AIPVI GRK++ E FAGA TYT+E++M D +ALQ+GTSHN G F+ AF Q+TD
Sbjct: 191 ENVLAIPVIKGRKTEKEKFAGAHATYTVESLMHDGKALQSGTSHNFGDGFAKAFDIQYTD 250
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
+N Q Q+V QTSW ++TR +G IIM HGDD+GL+LPP IAP Q+VI+P+ + K GVL
Sbjct: 251 KNNQLQYVHQTSWGVTTRLIGAIIMVHGDDSGLVLPPAIAPTQLVIIPV---SQHKEGVL 307
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A K+ L + RVK+DDSD + PGWKF+ +EMKG+PLRIEIGP+D+ V+ RR
Sbjct: 308 EKANELKQKLS-AKFRVKMDDSD-KMPGWKFSEYEMKGVPLRIEIGPKDIEKNQAVLVRR 365
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAI- 499
D + K+F +S++ LE V + L ++Q +LLE+A RD ++ EE + I
Sbjct: 366 D---NREKIF-VSLDN--LEETVVNTLADVQKSLLEKARELRDKKTYIAATLEEFDQIIN 419
Query: 500 SMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKSY 558
S + +G W E VKE+TGAT RC P EQ Q + C G PA+ + + K+Y
Sbjct: 420 STPGFVKGMWCGERECEDLVKEKTGATARCMPLEQEQLSDKCMCCGKPAKSMVYWGKAY 478
>sp|A4SFS0|SYP_PROVI Proline--tRNA ligase OS=Prosthecochloris vibrioformis (strain DSM
265) GN=proS PE=3 SV=1
Length = 481
Score = 501 bits (1289), Expect = e-141, Method: Compositional matrix adjust.
Identities = 252/485 (51%), Positives = 326/485 (67%), Gaps = 15/485 (3%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
IT R D++ WY+D++ +A+LADY VRG MVIRP GYA+WE +Q L+ FKETGH N
Sbjct: 5 ITSREADYSQWYIDLVRSAKLADYSDVRGCMVIRPNGYAVWEKMQAALDRMFKETGHVNA 64
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP FIP SFI KEA H+EGF+PE A+VT GGG+EL EKL VRPTSETI+ + +WI S
Sbjct: 65 YFPLFIPESFIAKEAEHIEGFAPECAVVTHGGGEELAEKLYVRPTSETIIWSSYKKWIQS 124
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLPLL+NQWANV RWEMRT+ F+RT EFLWQEGHTAHATPEE+++E M+MI +Y FA
Sbjct: 125 YRDLPLLINQWANVVRWEMRTRLFLRTTEFLWQEGHTAHATPEESQEEVMRMIRVYKTFA 184
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
E+ A+PVI GRK+ E FAGA TY IEAMM D +ALQAGTSHNLGQNF+ AF QF
Sbjct: 185 EEYMAMPVIMGRKTDSEKFAGADETYCIEAMMQDGKALQAGTSHNLGQNFAKAFDCQFQT 244
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
+ G +VW TSW +STR +G +IM H DD GL+LPP++A QVVI+PI + +K VL
Sbjct: 245 KEGVLDYVWATSWGVSTRLIGALIMAHSDDRGLVLPPKLATRQVVIIPILR--GDKAAVL 302
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
+ A S L+++GI +DDS+Q +PGWKF +E++GIP+RIE+GPRD+ G + +RR
Sbjct: 303 AKAESMAAELKENGIPAFVDDSEQNSPGWKFAEYELQGIPVRIEVGPRDIDKGVCIAARR 362
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAIS 500
D K + L V L +Q+ + ++A FR+ N +V+ YE K A+
Sbjct: 363 DTLEKTELQLD-----ATLAVQVSGMLSAMQADMFQKALRFREENTREVTDYETFKSAVE 417
Query: 501 MGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNK-------TCFMTGNPAQEVAL 553
G + W + E K+KEET ATIR P E C +G P+ + +
Sbjct: 418 EG-FVIAHWDGTAETEEKIKEETRATIRVLPEESDYREHYHMDEPGVCIFSGKPSSQKVV 476
Query: 554 FAKSY 558
FAK+Y
Sbjct: 477 FAKAY 481
>sp|Q6HNZ7|SYP2_BACHK Proline--tRNA ligase 2 OS=Bacillus thuringiensis subsp. konkukian
(strain 97-27) GN=proS2 PE=3 SV=1
Length = 476
Score = 493 bits (1268), Expect = e-138, Method: Compositional matrix adjust.
Identities = 235/481 (48%), Positives = 323/481 (67%), Gaps = 12/481 (2%)
Query: 79 RVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHS 138
+ IT +DF WY D++ AEL DY V+G M++RPYGYA+WE +Q ++ K K TGH
Sbjct: 7 QAITKMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKATGHE 66
Query: 139 NMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWI 198
N+Y P FIP S ++KE HVEGF+PE+A VT GG ++L E+L VRPTSET+ F++ +
Sbjct: 67 NVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERLCVRPTSETLFCEHFSKIV 126
Query: 199 HSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTK 258
SY DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EE++ E + ++++Y
Sbjct: 127 QSYNDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYAS 186
Query: 259 FAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQF 318
F ++ AIPVI G+K++ E FAGA TYTIE++M D +ALQ GTSHN G NFS AF +F
Sbjct: 187 FCEDYLAIPVIKGQKTEKEKFAGAKATYTIESLMHDGKALQTGTSHNFGTNFSEAFDIKF 246
Query: 319 TDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTG 378
D NG+ Q+V QTSW +STR +GG+IM H D+ GL++PP++AP+QVVIVPI A K G
Sbjct: 247 LDRNGKWQYVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPI---AQHKEG 303
Query: 379 VLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVIS 438
VL+ A+ + +QK RVK+D S+ +TPGWKFN +EMKGIP+R+E+GP+D+ VV+
Sbjct: 304 VLAKAIELQGHIQKVA-RVKIDASN-KTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLV 361
Query: 439 RRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEA 498
RRD K+ ISM+ LE + L+EI ++L +A FRD N V+S+EE+K+
Sbjct: 362 RRDTKEKE----FISMDQ--LEERIPALLEEIHNSLFNKAKVFRDENTYSVTSFEEMKKV 415
Query: 499 ISMGK-WARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKS 557
+ + + W A E K+KEE G + RC PFEQ C G A+++ + K+
Sbjct: 416 ADEKQGFIKAMWCGEVACEEKLKEEVGVSSRCMPFEQEHLADECVCCGKEAKQMVYWGKA 475
Query: 558 Y 558
Y
Sbjct: 476 Y 476
>sp|Q73E50|SYP2_BACC1 Proline--tRNA ligase 2 OS=Bacillus cereus (strain ATCC 10987)
GN=proS2 PE=3 SV=1
Length = 476
Score = 492 bits (1266), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/481 (48%), Positives = 321/481 (66%), Gaps = 12/481 (2%)
Query: 79 RVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHS 138
+ IT +DF WY D++ AEL DY V+G M++RPYGYA+WE +Q ++ K K TGH
Sbjct: 7 QAITKMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKATGHE 66
Query: 139 NMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWI 198
N+Y P FIP S ++KE HVEGF+PE+A VT GG ++L E+L +RPTSET+ F++ +
Sbjct: 67 NVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERLCIRPTSETLFCEHFSKIV 126
Query: 199 HSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTK 258
SY DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EE++ E + ++++Y
Sbjct: 127 QSYNDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYAS 186
Query: 259 FAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQF 318
F ++ AIPVI G+K++ E FAGA TYTIE++M D +ALQ GTSHN G NFS AF +F
Sbjct: 187 FCEDYLAIPVIKGQKTEKEKFAGAKATYTIESLMHDGKALQTGTSHNFGTNFSEAFDIKF 246
Query: 319 TDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTG 378
D NG+ Q+V QTSW +S R +GG+IM H D+ GL++PP++AP+QVVIVPI A K G
Sbjct: 247 LDRNGKWQYVHQTSWGVSARMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPI---AQHKEG 303
Query: 379 VLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVIS 438
VL+ A +E +QK RVK+D S+ +TPGWKFN +EMKGIP+R+E+GP+D+ VV+
Sbjct: 304 VLAKATELQEHIQKVA-RVKIDASN-KTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLV 361
Query: 439 RRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEA 498
RRD K+ I+ME LE + L+EI ++L +A FRD N V+ +EE+K+
Sbjct: 362 RRDTKEKE----FIAMEQ--LEERIPALLEEIHNSLFNKAKVFRDENTYSVTKFEEMKKV 415
Query: 499 ISMGK-WARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKS 557
+ + + W A E K+KEE G + RC PFEQ C G A+++ + K+
Sbjct: 416 ADEKQGFIKAMWCGELACEEKLKEEVGVSSRCMPFEQEHLANECICCGKEAKQMVYWGKA 475
Query: 558 Y 558
Y
Sbjct: 476 Y 476
>sp|Q63GI2|SYP2_BACCZ Proline--tRNA ligase 2 OS=Bacillus cereus (strain ZK / E33L)
GN=proS2 PE=3 SV=2
Length = 476
Score = 491 bits (1264), Expect = e-138, Method: Compositional matrix adjust.
Identities = 234/481 (48%), Positives = 323/481 (67%), Gaps = 12/481 (2%)
Query: 79 RVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHS 138
+ IT +DF WY D++ AEL DY V+G M++RPYGYA+WE +Q ++ K K TGH
Sbjct: 7 QAITKMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKATGHE 66
Query: 139 NMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWI 198
N+Y P FIP S ++KE HVEGF+PE+A VT GG ++L E+L +RPTSET+ F++ +
Sbjct: 67 NVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERLCIRPTSETLFCEHFSKIV 126
Query: 199 HSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTK 258
SY DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EE++ E + ++++Y
Sbjct: 127 QSYNDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYAS 186
Query: 259 FAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQF 318
F ++ AIPVI G+K++ E FAGA TYTIE++M D +ALQ GTSHN G NFS AF +F
Sbjct: 187 FCEDYLAIPVIKGQKTEKEKFAGAKATYTIESLMHDGKALQTGTSHNFGTNFSEAFDIKF 246
Query: 319 TDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTG 378
D G+ Q+V QTSW +STR +GG+IM HGD+ GL++PP++AP+QVVIVPI A K G
Sbjct: 247 LDRTGKWQYVHQTSWGVSTRMIGGLIMVHGDNNGLVMPPKVAPVQVVIVPI---AQHKEG 303
Query: 379 VLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVIS 438
VL+ A+ + +QK RVK+D S+ +TPGWKFN +EMKGIP+R+E+GP+D+ VV+
Sbjct: 304 VLAKAIELQGHIQKVA-RVKIDASN-KTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLV 361
Query: 439 RRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKE- 497
RRD K+ ISM+ LE + L+EI ++L +A FRD N V+++EE+K+
Sbjct: 362 RRDTKEKE----FISMDQ--LEERIPALLEEIHNSLFNKAKVFRDENTYSVTNFEEMKKI 415
Query: 498 AISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKS 557
A + + W A E K+KEE G + RC PFEQ C G A+++ + K+
Sbjct: 416 ADEKQGFIKAMWCGELACEEKLKEEVGVSSRCMPFEQEHLADECVCCGKEAKQMVYWGKA 475
Query: 558 Y 558
Y
Sbjct: 476 Y 476
>sp|A0R9A0|SYP2_BACAH Proline--tRNA ligase 2 OS=Bacillus thuringiensis (strain Al Hakam)
GN=proS2 PE=3 SV=2
Length = 476
Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust.
Identities = 234/481 (48%), Positives = 322/481 (66%), Gaps = 12/481 (2%)
Query: 79 RVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHS 138
+ IT +DF WY D++ AEL DY V+G M++RPYGYA+WE +Q ++ K K T H
Sbjct: 7 QAITKMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKATSHE 66
Query: 139 NMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWI 198
N+Y P FIP S ++KE HVEGF+PE+A VT GG ++L E+L VRPTSET+ F++ +
Sbjct: 67 NVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERLCVRPTSETLFCEHFSKIV 126
Query: 199 HSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTK 258
SY DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EE++ E + ++++Y
Sbjct: 127 QSYNDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYAS 186
Query: 259 FAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQF 318
F ++ AIPVI G+K++ E FAGA TYTIE++M D +ALQ GTSHN G NFS AF +F
Sbjct: 187 FCEDYLAIPVIKGQKTEKEKFAGAKATYTIESLMHDGKALQTGTSHNFGTNFSEAFDIKF 246
Query: 319 TDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTG 378
D NG+ Q+V QTSW +STR +GG+IM H D+ GL++PP++AP+QVVIVPI A K G
Sbjct: 247 LDRNGKWQYVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPI---AQHKEG 303
Query: 379 VLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVIS 438
VL+ A + +QK RVK+D S+ +TPGWKFN +EMKGIP+R+E+GP+D+ VV+
Sbjct: 304 VLAKATELQGHIQKVA-RVKIDASN-KTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLV 361
Query: 439 RRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEA 498
RRD K+ ISM+ LE + L+EI ++L +A FRD N V+S+EE+K+
Sbjct: 362 RRDTKEKE----FISMDQ--LEERIPALLEEIHNSLFNKAKVFRDENTYSVTSFEEMKKV 415
Query: 499 ISMGK-WARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKS 557
+ + + W A E K+KEE G + RC PFEQ + C G A+++ + K+
Sbjct: 416 ADEKQGFIKAMWCGELACEEKLKEEVGVSSRCMPFEQEHLAEECVCCGKEAKQMVYWGKA 475
Query: 558 Y 558
Y
Sbjct: 476 Y 476
>sp|Q81IE9|SYP2_BACCR Proline--tRNA ligase 2 OS=Bacillus cereus (strain ATCC 14579 / DSM
31) GN=proS2 PE=3 SV=1
Length = 476
Score = 489 bits (1259), Expect = e-137, Method: Compositional matrix adjust.
Identities = 235/481 (48%), Positives = 322/481 (66%), Gaps = 12/481 (2%)
Query: 79 RVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHS 138
+ IT +DF WY D++ AEL DY V+G M++RPYGYA+WE +Q ++ K KETGH
Sbjct: 7 QAITKMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKETGHE 66
Query: 139 NMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWI 198
N+Y P FIP S ++KE HVEGF+PE+A VT GG ++L E+L VRPTSET+ F++ +
Sbjct: 67 NVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERLCVRPTSETLFCEHFSKIV 126
Query: 199 HSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTK 258
SY DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EE++ E + ++++Y
Sbjct: 127 QSYNDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYAS 186
Query: 259 FAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQF 318
F ++ AIPVI G+K++ E FAGA TYTIE++M D +ALQ GTSHN G NFS AF +F
Sbjct: 187 FCEDYLAIPVIKGQKTEKEKFAGAKATYTIESLMHDGKALQTGTSHNFGTNFSEAFDIKF 246
Query: 319 TDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTG 378
D NG+ Q+V QTSW +STR +GG+IM H D+ GL+LPP++AP+QVVIVPI A K G
Sbjct: 247 LDRNGKWQYVHQTSWGVSTRMIGGLIMVHSDNNGLVLPPKVAPVQVVIVPI---AQHKEG 303
Query: 379 VLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVIS 438
VL+ A + +QK RVK+D S+ +TPGWKFN +EMKGIP+R+E+GP+D+ VV+
Sbjct: 304 VLAKATELQAHIQKVA-RVKIDASN-KTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLV 361
Query: 439 RRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKE- 497
RRD K+ + M+ LE + L+EI AL +A +FRD N +++EE+K+
Sbjct: 362 RRDTKEKE----FVPMDQ--LEERIPALLEEIHIALFNKAKAFRDENTYVATNFEEMKKI 415
Query: 498 AISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKS 557
A + + W A E K+KEE G + RC PFEQ + C G A+++ + K+
Sbjct: 416 ADEKQGFIKAMWCGELACEEKLKEEFGVSSRCMPFEQEHLAEECICCGKEAKQMVYWGKA 475
Query: 558 Y 558
Y
Sbjct: 476 Y 476
>sp|Q7MVS7|SYP_PORGI Proline--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=proS PE=3 SV=1
Length = 493
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 240/492 (48%), Positives = 327/492 (66%), Gaps = 20/492 (4%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
+TPRS+ ++ WY D++ A+LA+ VRG MVI+PYGYAIWE +Q L+ FKETGH N
Sbjct: 8 LTPRSESYSQWYQDLVIKADLAENSAVRGCMVIKPYGYAIWEKMQRQLDDMFKETGHVNA 67
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVT--------------IGGGKELEEKLVVRPTS 186
YFP FIP SF+ +EA HVEGF+ E A+VT + +LEE+L+VRPTS
Sbjct: 68 YFPLFIPKSFLSREAEHVEGFAKECAVVTHYRLKANPDGDGVVVDPQAKLEEELIVRPTS 127
Query: 187 ETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAE 246
ETI+ + + WI S+RDLP+L NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EEAE
Sbjct: 128 ETIIWNTYKNWIQSHRDLPILCNQWANVVRWEMRTRLFLRTAEFLWQEGHTAHATKEEAE 187
Query: 247 KEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNL 306
+EA +M+++Y FA E+ A+PV+ G KS E FAGA TYTIEA+M D +ALQ+GTSH L
Sbjct: 188 EEARRMLEVYATFAEEYMAMPVVKGVKSANERFAGAVDTYTIEALMQDGKALQSGTSHFL 247
Query: 307 GQNFSLAFGTQFTDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVI 366
GQNF+ AF F D++G R VW TSW +STR +G +IM+H DD GL+LPP++AP QVVI
Sbjct: 248 GQNFAKAFNVTFADKDGNRDFVWATSWGVSTRLMGALIMSHSDDNGLVLPPKLAPYQVVI 307
Query: 367 VPIWKKADEKTGVLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIG 426
+PI++ ++ + A + L+ GI VK D+SD + PGWKF +E+KGIP+R+ +G
Sbjct: 308 IPIYRNEEQLAQIDEKATQITQALRAKGISVKYDNSDNKKPGWKFAEYELKGIPVRLAMG 367
Query: 427 PRDVSSGSVVISRRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNI 486
RD+ + ++ I+RRD K+ G+ +E V LD+IQ + ++A ++R +
Sbjct: 368 ARDLENNTIEIARRDTLTKE--TVGLDG----IEETVATLLDDIQKNIFQKALNYRKEHT 421
Query: 487 VDVSSYEELKEAISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGN 546
+ V SYEE KE I G + W + E ++K ET ATIRC P C +TG
Sbjct: 422 ITVDSYEEFKEKIEDGGFILAHWDGTSETEERIKAETKATIRCIPLNGDMTPGKCMVTGK 481
Query: 547 PAQEVALFAKSY 558
P+ + LFA++Y
Sbjct: 482 PSPQRVLFARAY 493
>sp|B2RJG1|SYP_PORG3 Proline--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC 33277
/ DSM 20709 / JCM 12257) GN=proS PE=3 SV=1
Length = 493
Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/492 (48%), Positives = 327/492 (66%), Gaps = 20/492 (4%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
+TPRS+ ++ WY D++ A+LA+ VRG MVI+PYGYAIWE +Q L+ FKETGH N
Sbjct: 8 LTPRSESYSQWYQDLVIKADLAENSAVRGCMVIKPYGYAIWEKMQRQLDDMFKETGHVNA 67
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVT--------------IGGGKELEEKLVVRPTS 186
YFP FIP SF+ +EA HVEGF+ E A+VT + +LEE+L+VRPTS
Sbjct: 68 YFPLFIPKSFLSREAEHVEGFAKECAVVTHYRLKANPDGDGVVVDPQAKLEEELIVRPTS 127
Query: 187 ETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAE 246
ETI+ + + WI S+RDLP+L NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EEAE
Sbjct: 128 ETIIWNTYKNWIQSHRDLPILCNQWANVVRWEMRTRLFLRTAEFLWQEGHTAHATKEEAE 187
Query: 247 KEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNL 306
+EA +M+++Y FA E+ A+PV+ G KS E FAGA TYTIEA+M D +ALQ+GTSH L
Sbjct: 188 EEARRMLEVYATFAEEYMAMPVVKGVKSANERFAGAVDTYTIEALMQDGKALQSGTSHFL 247
Query: 307 GQNFSLAFGTQFTDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVI 366
GQNF+ AF F D++G R VW TSW +STR +G +IM+H DD GL+LPP++AP QVVI
Sbjct: 248 GQNFAKAFNVTFADKDGNRDFVWATSWGVSTRLMGALIMSHSDDNGLVLPPKLAPYQVVI 307
Query: 367 VPIWKKADEKTGVLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIG 426
VPI++ ++ + A + L+ GI VK D+SD + PGWKF +E+KG+P+R+ +G
Sbjct: 308 VPIYRNEEQLAQIDEKATQIIQALRAKGISVKYDNSDNKKPGWKFAEYELKGVPVRLAMG 367
Query: 427 PRDVSSGSVVISRRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNI 486
RD+ + ++ I+RRD K+ G+ +E V LD+IQ + ++A ++R +
Sbjct: 368 ARDLENNTIEIARRDTLTKE--TVGLDG----IEETVATLLDDIQKNIFQKALNYRKEHT 421
Query: 487 VDVSSYEELKEAISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGN 546
+ V SYEE KE I G + W + E ++K ET ATIRC P C +TG
Sbjct: 422 ITVDSYEEFKEKIEDGGFILAHWDGTSETEERIKAETKATIRCIPLNGDMTPGKCMVTGK 481
Query: 547 PAQEVALFAKSY 558
P+ + LFA++Y
Sbjct: 482 PSPQRVLFARAY 493
>sp|A5FA31|SYP_FLAJ1 Proline--tRNA ligase OS=Flavobacterium johnsoniae (strain ATCC
17061 / DSM 2064 / UW101) GN=proS PE=3 SV=1
Length = 492
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 240/497 (48%), Positives = 334/497 (67%), Gaps = 28/497 (5%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
+T RS+D++ WY +++ A+LA+ VRG MVI+PYGYAIWE +Q L+ FKETGH N
Sbjct: 5 LTTRSEDYSKWYNELVVKADLAENSGVRGCMVIKPYGYAIWEKMQAELDRMFKETGHQNA 64
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVT---------------IGGGKELEEKLVVRPT 185
YFP F+P S E E + EGF+ E A+VT + +LEE+L+VRPT
Sbjct: 65 YFPLFVPKSMFEAEEKNAEGFAKECAVVTHYRLKNDEDRPGKLMVDPNAKLEEELIVRPT 124
Query: 186 SETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEA 245
SE I+ + W+ SYRDLPLL+NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT +EA
Sbjct: 125 SEAIIWSTYKGWVQSYRDLPLLINQWANVVRWEMRTRLFLRTAEFLWQEGHTAHATKDEA 184
Query: 246 EKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHN 305
+E+ +M+++Y FA AIPV+ G K++ E FAGA TY IEA+M D +ALQAGTSH
Sbjct: 185 IEESEKMMNVYADFAENFMAIPVVKGFKTETERFAGADETYCIEALMQDGKALQAGTSHF 244
Query: 306 LGQNFSLAFGTQFTDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVV 365
LGQNF+ AF +F + G+++HVW TSW +STR +G +IMTH DD GL+LPP +APIQVV
Sbjct: 245 LGQNFAKAFDVKFANAEGKQEHVWGTSWGVSTRLMGALIMTHSDDQGLVLPPNLAPIQVV 304
Query: 366 IVPIWKKADEKTGVLSAA---LSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLR 422
IVPI K DE+ ++AA L+AK L+K I VK DD + PG+KF WE+KG+P+R
Sbjct: 305 IVPI-HKTDEQLAQITAAVNELTAK--LRKLKISVKYDDRTTQKPGFKFAEWELKGVPVR 361
Query: 423 IEIGPRDVSSGSVVISRRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFR 482
I +GP+D+ +G+ ++RRD K+ + I++ +V D L++IQ L ++A ++R
Sbjct: 362 IAVGPKDLENGTFEVARRDNLSKE-----VVAAEKIVD-HVNDLLEQIQKDLFDKALTYR 415
Query: 483 DSNIVDVSSYEELKEAI-SMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTC 541
+++I +V+++EE KE + G + W + A E K+K+ T ATIRC P + + TC
Sbjct: 416 NTHITEVNNFEEFKEVLEGKGGFISAHWDGTAATEEKIKDLTKATIRCIPLDAVEEAGTC 475
Query: 542 FMTGNPAQEVALFAKSY 558
TG P+ + LFAK+Y
Sbjct: 476 VFTGEPSSKRVLFAKAY 492
>sp|B1L224|SYP_CLOBM Proline--tRNA ligase OS=Clostridium botulinum (strain Loch Maree /
Type A3) GN=proS PE=3 SV=1
Length = 478
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/479 (48%), Positives = 319/479 (66%), Gaps = 12/479 (2%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
ITP +DF WY D++ AELADY ++G M+IRP GYAIWE IQ Y++ K KE GH N+
Sbjct: 11 ITPMDEDFAQWYTDIVKKAELADYSSIKGCMIIRPNGYAIWENIQKYVDTKLKEYGHENV 70
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
P FIP + ++KE HVEGF+PE+A VT GG EL E+L VRPTSET+ + + + S
Sbjct: 71 SMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERLCVRPTSETLFCEHYAKIVQS 130
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
Y+DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEAE +++++++Y++
Sbjct: 131 YKDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLC 190
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
+ A+PV+ G+K++ E FAGA TYTIE++M D +ALQAGTSH LGQNFS AF QF+D
Sbjct: 191 EDMLAMPVVMGKKTEKEKFAGADDTYTIESLMHDGKALQAGTSHYLGQNFSKAFAIQFSD 250
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
NG+ ++ T+WA++TR +G IIM HGDD+GL LPPRIAP Q VI+P+ A K GVL
Sbjct: 251 RNGKLEYPHYTTWAVTTRLIGAIIMVHGDDSGLKLPPRIAPTQAVIIPV---AQHKEGVL 307
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A KE L K +RVKLDDSD + PGWK++ +EMKGIPLRIEIGP+D+ V+ RR
Sbjct: 308 EKAKELKEKLAKV-VRVKLDDSD-KMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRR 365
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAI- 499
D ++ + + +E V++ LD I +++LE A RD ++ EE ++ I
Sbjct: 366 D--NREKTIVSLDE----IEIKVQEMLDTIHNSMLEEARKARDEKTYVATTMEEFEDIIE 419
Query: 500 SMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKSY 558
+ + + W A E K++E TGAT RC PFEQ + TC G A+ + + ++Y
Sbjct: 420 NKPGFIKAMWCGDRACEDKIREVTGATSRCMPFEQEVVSDTCVCCGKKAKNLIYWGRAY 478
>sp|B3ER64|SYP_AMOA5 Proline--tRNA ligase OS=Amoebophilus asiaticus (strain 5a2) GN=proS
PE=3 SV=1
Length = 491
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/490 (47%), Positives = 320/490 (65%), Gaps = 21/490 (4%)
Query: 84 RSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFP 143
R+++F+ WY ++I AELA+ VRG M IRPYG+AIWE +Q L+ FK TGH N YFP
Sbjct: 8 RAENFSEWYNEIIKRAELAENAAVRGCMTIRPYGFAIWEKMQAILDKAFKATGHENAYFP 67
Query: 144 QFIPYSFIEKEASHVEGFSPELALVT--------------IGGGKELEEKLVVRPTSETI 189
FIP S++ +EA+HVEGF+ E A+VT + +LEE+L+VRPTSETI
Sbjct: 68 IFIPKSYLNREAAHVEGFAKECAVVTHYRLKATEDGQQVVVDPSAKLEEELIVRPTSETI 127
Query: 190 VNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEA 249
+ + + WI SYRDLPLL+NQW NV RWEMRT+ F+RT EFLWQEGHTAHAT EAE+EA
Sbjct: 128 IWNSYKNWIQSYRDLPLLINQWCNVVRWEMRTRLFLRTAEFLWQEGHTAHATQAEAEQEA 187
Query: 250 MQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQN 309
+QM++IY F ++ AIP + G K++ E FAGA TYTIEA+M D +ALQAGTSH LGQ
Sbjct: 188 LQMLNIYADFGKDYLAIPFLKGIKTEHERFAGAEETYTIEALMQDGKALQAGTSHFLGQR 247
Query: 310 FSLAFGTQFTDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPI 369
F+ AF FT++ GQ +VW TSW ++TR +G ++MTH DD GL+LPPR+APIQ+VI+PI
Sbjct: 248 FAKAFEVTFTNQAGQLDYVWGTSWGLTTRLIGALVMTHSDDKGLVLPPRVAPIQIVIIPI 307
Query: 370 WKKADEKTGVLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRD 429
++ +EK + A ++ L I KLD D+ PGWKF +E+KG+P+R+ IGP D
Sbjct: 308 YRTQEEKEAIQQQAQHIQQQLIAHNISAKLDGRDEHKPGWKFAEYELKGVPIRMAIGPND 367
Query: 430 VSSGSVVISRRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDV 489
+++ +V ++RRD K ++ + VK LD I L +RA FR+ N V
Sbjct: 368 LANNTVELTRRDTSEK------TTVPTDNIIVVVKSMLDSIHDNLYQRAYEFREQNTYQV 421
Query: 490 SSYEELKEAISMGK-WARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPA 548
+SYEE K AIS + + W + E ++ ET ATIRC P E C TG P+
Sbjct: 422 NSYEEFKTAISQKRGFILAHWDGTKETERQIHAETKATIRCIPLEVNTEPGVCIYTGKPS 481
Query: 549 QEVALFAKSY 558
++ +F ++Y
Sbjct: 482 KQRVVFGQAY 491
>sp|Q18CD7|SYP2_CLOD6 Proline--tRNA ligase 2 OS=Clostridium difficile (strain 630)
GN=proS2 PE=3 SV=1
Length = 481
Score = 484 bits (1246), Expect = e-136, Method: Compositional matrix adjust.
Identities = 238/479 (49%), Positives = 313/479 (65%), Gaps = 10/479 (2%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
IT DF WY DVI+ +L DY PV+G MV++PYGYA+WE +Q++++ KFKETGH N
Sbjct: 12 ITKMEDDFPQWYTDVITKTDLVDYAPVKGFMVVKPYGYALWEKMQEFMDKKFKETGHKNC 71
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP IP S + KEA HVEGF+PE+A VT GG K+LEE+L VRPTSETI+ M+ +W+ S
Sbjct: 72 YFPLLIPESLLNKEAEHVEGFAPEVAWVTHGGNKKLEERLCVRPTSETIICTMYAKWLKS 131
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YR+LP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEA++E +Q +++Y
Sbjct: 132 YRELPYLYNQWCSVVRWEKSTRPFLRTSEFLWQEGHTLHETAEEAQEETIQQLEVYKALC 191
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
E A+PV+AG+KS+ E FAG RTYTIEAMM D +ALQ+GTSH LGQ+F+ AF F D
Sbjct: 192 EELLAMPVVAGQKSESEKFAGGERTYTIEAMMHDGKALQSGTSHFLGQHFTKAFDITFAD 251
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
G + + TSW STR +GG+IMTH D+ GL+LPPR+APIQVVIVPI A +K V+
Sbjct: 252 REGNLANPYHTSWGASTRLIGGLIMTHSDNRGLVLPPRVAPIQVVIVPI---AAKKGNVM 308
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
L+ G+ V++DD D T GWKFN WEMKG+P+R+EIGP+D+ + ++ RR
Sbjct: 309 ETVDKIYADLKAKGVAVEVDDRDNYTTGWKFNEWEMKGVPVRVEIGPKDIENNQAMVFRR 368
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAIS 500
D K SM L + D D I + + E+A R+ N V + +E ++A+
Sbjct: 369 DTLEKD------SMPLEGLADAICDLFDVIHNDMFEKARKHREDNTSIVENMDEFRKALE 422
Query: 501 MG-KWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKSY 558
+ + W E K+KEETGATIRC PFEQ C G A + + AK+Y
Sbjct: 423 EKPGFIKTMWCGDAECEAKIKEETGATIRCLPFEQENLGHKCVYCGKEADSMVVMAKAY 481
>sp|C3KUV8|SYP_CLOB6 Proline--tRNA ligase OS=Clostridium botulinum (strain 657 / Type
Ba4) GN=proS PE=3 SV=1
Length = 478
Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/479 (48%), Positives = 318/479 (66%), Gaps = 12/479 (2%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
ITP +DF WY D++ AELADY ++G M+IRP GYAIWE IQ Y++ K KE GH N+
Sbjct: 11 ITPMDEDFAQWYTDIVKKAELADYSSIKGCMIIRPNGYAIWENIQKYVDTKLKEYGHENV 70
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
P FIP + ++KE HVEGF+PE+A VT GG EL E+L VRPTSET+ + + + S
Sbjct: 71 SMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERLCVRPTSETLFCEHYAKIVQS 130
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
Y+DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEAE +++++++Y++
Sbjct: 131 YKDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLC 190
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
+ A+PV+ G+K++ E FAGA TYTIE++M D +ALQAGTSH LGQNFS AF QF+D
Sbjct: 191 EDMLAMPVVMGKKTEKEKFAGADDTYTIESLMHDGKALQAGTSHYLGQNFSKAFAIQFSD 250
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
NG+ ++ T+WA++TR +G IIM HGDD+GL LPPRIAP Q VI+P+ A K GVL
Sbjct: 251 RNGKLEYPHYTTWAVTTRLIGAIIMVHGDDSGLKLPPRIAPTQAVIIPV---AQHKEGVL 307
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A KE L K +RVKLDDSD + PGWK++ +EMKGIPLRIEIGP+D+ V+ RR
Sbjct: 308 EKAKELKERLAKV-VRVKLDDSD-KMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRR 365
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAI- 499
D ++ + + +E V++ LD I +++LE A RD + EE ++ I
Sbjct: 366 D--NREKTIVSLDE----IEVKVQEMLDIIHNSMLEEARKSRDEKTYVAITMEEFEDIIE 419
Query: 500 SMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKSY 558
+ + + W A E K++E TGAT RC PFEQ + TC G A+ + + ++Y
Sbjct: 420 NKPGFIKAMWCGDRACEDKIREVTGATSRCMPFEQEVVSDTCVCCGKKAKNLVYWGRAY 478
>sp|B6YQ92|SYP_AZOPC Proline--tRNA ligase OS=Azobacteroides pseudotrichonymphae
genomovar. CFP2 GN=proS PE=3 SV=1
Length = 493
Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust.
Identities = 229/492 (46%), Positives = 326/492 (66%), Gaps = 20/492 (4%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
+TP+S + WY D++ A+LA+ VRG MVI+PYGYAIWE IQ L+ FKETGH N
Sbjct: 8 LTPKSVSSSRWYNDLVIKADLAENSAVRGCMVIKPYGYAIWEKIQRQLDEMFKETGHVNA 67
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVT--------IGGG------KELEEKLVVRPTS 186
YFP FIP SF+ +EASH+EGF+ E A+VT IG G +LEE+L++RPTS
Sbjct: 68 YFPLFIPKSFLNREASHIEGFAKECAIVTHYRLKNDPIGKGIIVDSEAKLEEELIIRPTS 127
Query: 187 ETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAE 246
E+I+ + + +WIHSYRDLP+L+NQWANV RWEMRT+ F+RT EFLWQEGHTAH + EEA
Sbjct: 128 ESIIWNTYKKWIHSYRDLPILINQWANVVRWEMRTRLFLRTAEFLWQEGHTAHTSKEEAI 187
Query: 247 KEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNL 306
+E ++++DIY F ++ AIPV G K+ E FAGA+ TY IE +M D +ALQAGTSH L
Sbjct: 188 EETLKILDIYANFVEQYMAIPVTKGVKTPCERFAGATDTYCIETLMQDGKALQAGTSHFL 247
Query: 307 GQNFSLAFGTQFTDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVI 366
GQNF+ AF QF ++ G+R++VW TSW +STR +G +IM H DD GL+LPP++AP Q+VI
Sbjct: 248 GQNFAKAFDVQFLNKKGKREYVWATSWGVSTRLMGALIMMHSDDNGLVLPPKLAPCQIVI 307
Query: 367 VPIWKKADEKTGVLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIG 426
+P+ K + A + + I VK D++D + PGWKF +E+KGIP+R+ +G
Sbjct: 308 IPVSKDRTSLEDINEKATNIINDFKNLDINVKYDNTDNKKPGWKFAEYELKGIPIRLTLG 367
Query: 427 PRDVSSGSVVISRRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNI 486
RD+ +G++ +SRRD K+ ++ + + Y + L++IQ + ++A +R +N
Sbjct: 368 TRDLENGTIEVSRRDTLTKE------TISINNITDYANNLLNDIQQNIYQKALDYRSANT 421
Query: 487 VDVSSYEELKEAISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGN 546
V V +Y+E KE I G + W + E ++K+ET ATIRC P +TG
Sbjct: 422 VYVDNYDEFKERIEEGGFIMAHWDGTAKTEEQIKKETKATIRCIPLNGDITPGIDMLTGM 481
Query: 547 PAQEVALFAKSY 558
P+++ +FA++Y
Sbjct: 482 PSKQRVIFARAY 493
>sp|B1IFI2|SYP_CLOBK Proline--tRNA ligase OS=Clostridium botulinum (strain Okra / Type
B1) GN=proS PE=3 SV=1
Length = 478
Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/479 (48%), Positives = 317/479 (66%), Gaps = 12/479 (2%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
ITP +DF WY D++ AELADY +RG M+IRP GYAIWE IQ Y++ K KE GH N+
Sbjct: 11 ITPMDEDFAQWYTDIVKKAELADYSSIRGCMIIRPNGYAIWENIQKYVDTKLKEYGHENV 70
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
P FIP + ++KE HVEGF+PE+A VT GG EL E+L VRPTSET+ + + + S
Sbjct: 71 SMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERLCVRPTSETLFCEHYAKIVQS 130
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
Y+DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEAE +++++++Y++
Sbjct: 131 YKDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLC 190
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
+ A+PV+ G+K+ E FAGA TYTIE++M D +ALQAGTSH LGQNFS AF QF+D
Sbjct: 191 EDMLAMPVVMGKKTDKEKFAGADDTYTIESLMHDGKALQAGTSHYLGQNFSKAFAIQFSD 250
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
NG+ + T+WA++TR +G IIM HGD++GL LPPRIAP Q VI+P+ A K GVL
Sbjct: 251 RNGKLDYPHYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPV---AQHKEGVL 307
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A KE L K +RVKLDDSD + PGWK++ +EMKGIPLRIEIGP+D+ V+ RR
Sbjct: 308 EKAEELKERLAKV-VRVKLDDSD-KMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRR 365
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAI- 499
D ++ + + +E V++ LD I +++LE A RD ++ EE ++ I
Sbjct: 366 D--NREKTIVSLDE----IEIKVQEMLDIIHNSMLEEAKKTRDEKTYVATNMEEFEDTIE 419
Query: 500 SMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKSY 558
+ + + W A E K++E TGAT RC PFEQ + TC G A+ + + ++Y
Sbjct: 420 NKPGFIKAMWCGDKACEDKIREVTGATSRCMPFEQEVVSDTCVCCGKKAKNLVYWGRAY 478
>sp|C1FM10|SYP_CLOBJ Proline--tRNA ligase OS=Clostridium botulinum (strain Kyoto / Type
A2) GN=proS PE=3 SV=1
Length = 478
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/479 (48%), Positives = 317/479 (66%), Gaps = 12/479 (2%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
ITP +DF WY D++ AELADY +RG M+IRP GYAIWE IQ Y++ K KE GH N+
Sbjct: 11 ITPMDEDFAQWYTDIVKKAELADYSSIRGCMIIRPNGYAIWENIQKYVDTKLKEYGHENV 70
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
P FIP + ++KE HVEGF+PE+A VT GG EL E+L VRPTSET+ + + + S
Sbjct: 71 SMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERLCVRPTSETLFCEHYAKIVQS 130
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
Y+DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEAE +++++++Y++
Sbjct: 131 YKDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLC 190
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
+ A+PV+ G+K+ E FAGA TYTIE++M D +ALQAGTSH LGQNFS AF QF+D
Sbjct: 191 EDMLAMPVVMGKKTDKEKFAGADDTYTIESLMHDGKALQAGTSHYLGQNFSKAFAIQFSD 250
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
NG+ + T+WA++TR +G IIM HGD++GL LPPRIAP Q VI+P+ A K GVL
Sbjct: 251 RNGKLDYPHYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPV---AQHKEGVL 307
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A KE L K +RVKLDDSD + PGWK++ +EMKGIPLRIEIGP+D+ V+ RR
Sbjct: 308 EKAKELKEKLAKV-VRVKLDDSD-KMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRR 365
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAI- 499
D ++ + + +E V++ LD I +++LE A RD ++ EE ++ I
Sbjct: 366 D--NREKTIVSLDE----IEIKVQEMLDIIHNSMLEEAKKTRDEKTYVATNMEEFEDTIE 419
Query: 500 SMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKSY 558
+ + + W A E K++E TGAT RC PFEQ + TC G A+ + + ++Y
Sbjct: 420 NKPGFIKAMWCGDRACEDKIREVTGATSRCMPFEQEVVSDTCVCCGKKAKNLVYWGRAY 478
>sp|A7GIT0|SYP_CLOBL Proline--tRNA ligase OS=Clostridium botulinum (strain Langeland /
NCTC 10281 / Type F) GN=proS PE=3 SV=1
Length = 478
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 234/479 (48%), Positives = 317/479 (66%), Gaps = 12/479 (2%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
ITP +DF WY D++ AELADY +RG M+IRP GYAIWE IQ Y++ K KE GH N+
Sbjct: 11 ITPMDEDFAQWYTDIVKKAELADYSSIRGCMIIRPNGYAIWENIQKYVDTKLKEYGHENV 70
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
P FIP + ++KE HVEGF+PE+A VT GG EL E+L VRPTSET+ + + + S
Sbjct: 71 SMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERLCVRPTSETLFCEHYAKIVQS 130
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
Y+DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEAE +++++++Y++
Sbjct: 131 YKDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLC 190
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
+ A+PV+ G+K+ E FAGA TYTIE++M D +ALQAGTSH LGQNFS AF QF+D
Sbjct: 191 EDMLAMPVVMGKKTDKEKFAGADDTYTIESLMHDGKALQAGTSHYLGQNFSKAFAIQFSD 250
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
NG+ + T+WA++TR +G IIM HGD++GL LPPRIAP Q VI+P+ A K GVL
Sbjct: 251 RNGKLDYPHYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPV---AQHKEGVL 307
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A KE L K +RVKLDDSD + PGWK++ +EMKGIPLRIEIGP+D+ V+ RR
Sbjct: 308 EKAEELKERLAKV-VRVKLDDSD-KMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRR 365
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAI- 499
D ++ + + +E V++ LD I +++LE A RD ++ EE ++ I
Sbjct: 366 D--NREKTIVSLDE----IEIKVQEMLDIIHNSMLEEAKKTRDEKTYVATNMEEFEDTIE 419
Query: 500 SMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKSY 558
+ + + W A E K++E TGAT RC PFEQ + TC G A+ + + ++Y
Sbjct: 420 NKPGFIKAMWCGDRACEDKIREVTGATSRCMPFEQEVVSDTCVCCGKKAKNLVYWGRAY 478
>sp|Q1AX25|SYP_RUBXD Proline--tRNA ligase OS=Rubrobacter xylanophilus (strain DSM 9941 /
NBRC 16129) GN=proS PE=3 SV=1
Length = 476
Score = 482 bits (1240), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/479 (50%), Positives = 328/479 (68%), Gaps = 11/479 (2%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
+T +S+D + WYL+++ A+LADYGPVRGT IRPYG+AIWE IQ L+ +FK TGH N
Sbjct: 8 LTKKSEDSSRWYLELVRMAKLADYGPVRGTFAIRPYGFAIWERIQADLDARFKATGHVNA 67
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP IP S++ KEA HVEGF+PE A VT+GG ELEE+L +RPTSE+I+ + +WIHS
Sbjct: 68 YFPLLIPESYLTKEAEHVEGFAPECAWVTVGGDDELEERLAIRPTSESIICDFYRKWIHS 127
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLP+L+NQW NV RWEM T+PF+RT EFLWQEGHT HAT EEA +EA++M+++Y
Sbjct: 128 YRDLPVLINQWCNVLRWEMVTRPFLRTAEFLWQEGHTVHATAEEAREEALRMLNVYRDCF 187
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
YE AIPV+ G KS E FAGA T+T E +MGD RALQA TSH+LGQNF+ AF F D
Sbjct: 188 YEVLAIPVLTGMKSPSERFAGAVETFTCEGLMGDGRALQAATSHDLGQNFARAFDITFLD 247
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
EN +R H +QTSW STR +G +I+ HGDD GL LPP++AP Q V+VPIW+ + K V
Sbjct: 248 ENQERVHPYQTSWGFSTRTIGALILVHGDDRGLRLPPKLAPTQAVVVPIWRGKN-KGEVR 306
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A + L ++G+R + D ++ +PGWKFN E++G+P+R+E+GP+D+ G V+ RR
Sbjct: 307 REAEALHRELAEAGLRAEADLDEEHSPGWKFNEHELRGVPVRVELGPKDIEKGQAVLVRR 366
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAIS 500
D K+ G + + + +DEIQ +L +A +FRD N +YEE KE I
Sbjct: 367 DTGEKEFVGRGAAARRLV------ELMDEIQQNMLRQAEAFRDENTRRAETYEEFKEIIE 420
Query: 501 MGK-WARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKSY 558
+ + PW ++ E ++KEET ATIR PFE+ +G ++G P + A+FA++Y
Sbjct: 421 EKRGFVVAPWDGTEETEQRIKEETKATIRLLPFEREEGKD--LVSGRPGK-TAVFARAY 476
>sp|Q8A988|SYP_BACTN Proline--tRNA ligase OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=proS
PE=3 SV=1
Length = 497
Score = 482 bits (1240), Expect = e-135, Method: Compositional matrix adjust.
Identities = 240/496 (48%), Positives = 336/496 (67%), Gaps = 24/496 (4%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
+T RS++++ WY D++ A+LA+ VRG MVI+PYGYAIWE +Q L+ FKETGH N
Sbjct: 8 LTKRSENYSQWYNDLVVKADLAEQSAVRGCMVIKPYGYAIWEKMQRQLDDMFKETGHVNA 67
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVT--------------IGGGKELEEKLVVRPTS 186
YFP IP SF+ +EA HVEGF+ E A+VT + +LEE+L++RPTS
Sbjct: 68 YFPLLIPKSFLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVVVDPAAKLEEELIIRPTS 127
Query: 187 ETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAE 246
ETI+ + + WI SYRDLP+L NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EEAE
Sbjct: 128 ETIIWNTYKNWIQSYRDLPILCNQWANVFRWEMRTRLFLRTAEFLWQEGHTAHATREEAE 187
Query: 247 KEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNL 306
+EA++M+++Y +FA ++ A+PV+ G KS E FAGA TYTIEAMM D +ALQ+GTSH L
Sbjct: 188 EEAIRMLNVYGEFAEKYMAVPVVKGVKSANERFAGALDTYTIEAMMQDGKALQSGTSHFL 247
Query: 307 GQNFSLAFGTQFTDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVI 366
GQNF+ AF QF ++ + ++VW TSW +STR +G +IMTH DD GL+LPP +APIQVVI
Sbjct: 248 GQNFAKAFDVQFVNKENKMEYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVI 307
Query: 367 VPIWKKADEKTGVLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIG 426
VPI+K ++ + + L+ GI VK D++D + PG+KF +E+KG+P+R+ +G
Sbjct: 308 VPIYKNDEQLKQIDAKVEGIVAKLKALGISVKYDNADNKRPGFKFADYELKGVPVRLVMG 367
Query: 427 PRDVSSGSVVISRRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNI 486
RD+ + ++ + RRD K+ ++ +E YV+ L+EIQ+ + ++A +R+S I
Sbjct: 368 GRDLENNTMEVMRRDTLEKE------TVTCDGIETYVQKLLEEIQANIYKKALDYRNSKI 421
Query: 487 VDVSSYEELKEAISMGKWARGPWSASDADELKVKEETGATIRCFPFEQ-PQGNK---TCF 542
V +YEE KE I G + W + E K+KE+T ATIRC PF+ +G+K C
Sbjct: 422 TTVDTYEEFKEKIEEGGFILAHWDGTTETEEKIKEDTKATIRCIPFDSYVEGDKEPGKCM 481
Query: 543 MTGNPAQEVALFAKSY 558
+TG P+ +FA+SY
Sbjct: 482 VTGKPSACRVVFARSY 497
>sp|B7J1X2|SYP_BORBZ Proline--tRNA ligase OS=Borrelia burgdorferi (strain ZS7) GN=proS
PE=3 SV=1
Length = 488
Score = 482 bits (1240), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/488 (48%), Positives = 327/488 (67%), Gaps = 14/488 (2%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
I + D++ WYLD++ A+LADY PV+G MVI PYGY+IW IQ L+ KFKETGH N
Sbjct: 5 IASKEDDYSKWYLDIVQKAKLADYSPVKGCMVIMPYGYSIWSKIQSILDKKFKETGHENA 64
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP IPYSF+E+E H++GFSPE A++ GG+ L E LV+RPTSETI+ +M+++WI S
Sbjct: 65 YFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMYSKWIKS 124
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLPL +NQWANV RWE RT+PF+RT EFLWQEGHTAHAT EEA +E + ++D+Y +F
Sbjct: 125 YRDLPLKINQWANVVRWEKRTRPFLRTTEFLWQEGHTAHATEEEALEETLLILDVYKRFI 184
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
++ AIPV G+KS+ E FAGA TY+IEA+M DK+ALQA TSH LG NF+ AF +F D
Sbjct: 185 EDYLAIPVFCGKKSEKEKFAGAVSTYSIEALMQDKKALQAATSHYLGLNFAKAFDVKFQD 244
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADE-KTGV 379
++G+ +HV+ +SW +STR +G +IM H D+ GL+LPPRIAPI+++++PI+KK DE +
Sbjct: 245 KDGKMRHVFASSWGVSTRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKEDEINKKI 304
Query: 380 LSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISR 439
L + L+K+G RV++D + +PG++F+ E KGIP+R+E+G DV SV ISR
Sbjct: 305 LDYCDCVVDALKKAGFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLLNSVTISR 364
Query: 440 RDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDV-----SSYEE 494
RD + + F + L + VK +LD +Q L +RA +FR N ++ SYE
Sbjct: 365 RD----KDRKFKYQISLDSLVSKVKVELDLMQKDLFQRALNFRILNTKEIFRSSKDSYET 420
Query: 495 LKEAIS-MGKWARGPWSASDADELKVKEETGATIRCFPFE---QPQGNKTCFMTGNPAQE 550
K ++ + W S E +K ET ATIRC P + + TC + A+
Sbjct: 421 FKAYVNDYSGFVLSCWCGSLNCENIIKNETKATIRCIPDDFKARDLTGMTCIYCSSKAKY 480
Query: 551 VALFAKSY 558
LFAKSY
Sbjct: 481 FVLFAKSY 488
>sp|A6L5I2|SYP_BACV8 Proline--tRNA ligase OS=Bacteroides vulgatus (strain ATCC 8482 /
DSM 1447 / NCTC 11154) GN=proS PE=3 SV=1
Length = 496
Score = 481 bits (1238), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/495 (48%), Positives = 330/495 (66%), Gaps = 23/495 (4%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
+T RS++++ WY D++ A+LA+ PVRG MVI+PYGYAIWE +Q L+ FKETGH N
Sbjct: 8 LTKRSENYSQWYNDLVVKADLAEQSPVRGCMVIKPYGYAIWEKMQRQLDDMFKETGHVNA 67
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVT--------------IGGGKELEEKLVVRPTS 186
YFP IP S++ +EA HVEGF+ E A+VT + +LEE+L++RPTS
Sbjct: 68 YFPLLIPKSYLSREAEHVEGFAKECAVVTHYRLKNAEDGSGVIVDPAAKLEEELIIRPTS 127
Query: 187 ETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAE 246
ETI+ + WI+SYRDLP+L NQWANV RWEMRT+ F+RT EFLWQEGHTAHAT EEAE
Sbjct: 128 ETIIWSTYKNWINSYRDLPILCNQWANVMRWEMRTRLFLRTAEFLWQEGHTAHATREEAE 187
Query: 247 KEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNL 306
EA +M+ +Y FA ++ A+PVI G KS E FAGA TYTIE +M D +ALQ GTSH L
Sbjct: 188 AEAQKMLHVYGDFAEKYMAVPVIKGVKSANERFAGALDTYTIEGLMQDGKALQCGTSHFL 247
Query: 307 GQNFSLAFGTQFTDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVI 366
GQNF+ AF QF D+N + +VW TSW +STR +G +IMTH DD GL+LPP +APIQVVI
Sbjct: 248 GQNFAKAFNVQFVDKNNKLDYVWATSWGVSTRLMGALIMTHSDDNGLVLPPHLAPIQVVI 307
Query: 367 VPIWKKADEKTGVLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIG 426
VPI+K + + + L+ GI VK D++D + PG+KF +E+KG+P+R+ +G
Sbjct: 308 VPIYKNDEMLKKIDAKVEGIVNKLKAMGISVKYDNADNKRPGFKFADYELKGVPVRLVMG 367
Query: 427 PRDVSSGSVVISRRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNI 486
RD+ + ++ + RRD K+ + +E YV+ L++IQ+ + ++A ++R+ +I
Sbjct: 368 GRDLENNTMEVMRRDTLEKETR------SCDGIEEYVQQLLEDIQNNIYQKALNYRNEHI 421
Query: 487 VDVSSYEELKEAISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKT---CFM 543
V V SY++ KE I G + W + E ++KEET ATIRC PF+ + + T C +
Sbjct: 422 VKVDSYDDFKEQIEKGGFILAHWDGTPETEDRIKEETKATIRCLPFDADEESLTPGKCMV 481
Query: 544 TGNPAQEVALFAKSY 558
TG P+ LFA++Y
Sbjct: 482 TGKPSARRVLFARAY 496
>sp|A5I768|SYP_CLOBH Proline--tRNA ligase OS=Clostridium botulinum (strain Hall / ATCC
3502 / NCTC 13319 / Type A) GN=proS PE=3 SV=1
Length = 478
Score = 481 bits (1238), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/479 (48%), Positives = 316/479 (65%), Gaps = 12/479 (2%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
ITP +DF WY D++ AELADY +RG M+IRP GY IWE IQ Y++ K KE GH N+
Sbjct: 11 ITPMDEDFAQWYTDIVKKAELADYSSIRGCMIIRPNGYGIWENIQKYVDTKLKEYGHENV 70
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
P FIP + ++KE HVEGF+PE+A VT GG EL E+L VRPTSET+ + + + S
Sbjct: 71 SMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERLCVRPTSETLFCEHYAKIVQS 130
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
Y+DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEAE +++++++Y++
Sbjct: 131 YKDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLC 190
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
+ A+PV+ G+K+ E FAGA TYTIE++M D +ALQAGTSH LGQNFS AF QF+D
Sbjct: 191 EDMLAMPVVMGKKTDKEKFAGADDTYTIESLMHDGKALQAGTSHYLGQNFSKAFAIQFSD 250
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
NG+ + T+WA++TR +G IIM HGD++GL LPPRIAP Q VI+P+ A K GVL
Sbjct: 251 RNGKLDYPHYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPV---AQHKEGVL 307
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A KE L K +RVKLDDSD + PGWK++ +EMKGIPLRIEIGP+D+ V+ RR
Sbjct: 308 EKAKELKEKLAKV-VRVKLDDSD-KMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRR 365
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAI- 499
D ++ + + +E V++ LD I +++LE A RD ++ EE ++ I
Sbjct: 366 D--NREKTIVSLDE----IEIKVQEMLDIIHNSMLEEAKKTRDEKTYVATNMEEFEDTIE 419
Query: 500 SMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKSY 558
+ + + W A E K++E TGAT RC PFEQ + TC G A+ + + ++Y
Sbjct: 420 NKPGFIKAMWCGDRACEDKIREVTGATSRCMPFEQEVVSDTCVCCGKKAKNLVYWGRAY 478
>sp|A7FYU0|SYP_CLOB1 Proline--tRNA ligase OS=Clostridium botulinum (strain ATCC 19397 /
Type A) GN=proS PE=3 SV=1
Length = 478
Score = 481 bits (1238), Expect = e-135, Method: Compositional matrix adjust.
Identities = 233/479 (48%), Positives = 316/479 (65%), Gaps = 12/479 (2%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
ITP +DF WY D++ AELADY +RG M+IRP GY IWE IQ Y++ K KE GH N+
Sbjct: 11 ITPMDEDFAQWYTDIVKKAELADYSSIRGCMIIRPNGYGIWENIQKYVDTKLKEYGHENV 70
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
P FIP + ++KE HVEGF+PE+A VT GG EL E+L VRPTSET+ + + + S
Sbjct: 71 SMPIFIPENLLQKEKDHVEGFAPEVAWVTHGGDDELAERLCVRPTSETLFCEHYAKIVQS 130
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
Y+DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EEAE +++++++Y++
Sbjct: 131 YKDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETKEEAESHSLKILNMYSRLC 190
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
+ A+PV+ G+K+ E FAGA TYTIE++M D +ALQAGTSH LGQNFS AF QF+D
Sbjct: 191 EDMLAMPVVMGKKTDKEKFAGADDTYTIESLMHDGKALQAGTSHYLGQNFSKAFAIQFSD 250
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTGVL 380
NG+ + T+WA++TR +G IIM HGD++GL LPPRIAP Q VI+P+ A K GVL
Sbjct: 251 RNGKLDYPHYTTWAVTTRLIGAIIMVHGDNSGLKLPPRIAPTQAVIIPV---AQHKEGVL 307
Query: 381 SAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISRR 440
A KE L K +RVKLDDSD + PGWK++ +EMKGIPLRIEIGP+D+ V+ RR
Sbjct: 308 EKAKELKEKLAKV-VRVKLDDSD-KMPGWKYSEYEMKGIPLRIEIGPKDIEKNQAVLVRR 365
Query: 441 DVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKEAI- 499
D ++ + + +E V++ LD I +++LE A RD ++ EE ++ I
Sbjct: 366 D--NREKTIVSLDE----IEIKVQEMLDIIHNSMLEEAKKTRDEKTYVATNMEEFEDTIE 419
Query: 500 SMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGNPAQEVALFAKSY 558
+ + + W A E K++E TGAT RC PFEQ + TC G A+ + + ++Y
Sbjct: 420 NKPGFIKAMWCGDRACEDKIREVTGATSRCMPFEQEVVSDTCVCCGKKAKNLVYWGRAY 478
>sp|O51363|SYP_BORBU Proline--tRNA ligase OS=Borrelia burgdorferi (strain ATCC 35210 /
B31 / CIP 102532 / DSM 4680) GN=proS PE=1 SV=1
Length = 488
Score = 478 bits (1231), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/488 (48%), Positives = 327/488 (67%), Gaps = 14/488 (2%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
I + D++ WYLD++ A+LADY PV+G MVI PYGY+IW IQ L+ KFKETGH N
Sbjct: 5 IASKEDDYSKWYLDIVQKAKLADYSPVKGCMVIMPYGYSIWSKIQSILDKKFKETGHENA 64
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHS 200
YFP IPYSF+E+E H++GFSPE A++ GG+ L E LV+RPTSETI+ +M+++WI S
Sbjct: 65 YFPMLIPYSFLEREKDHIDGFSPEFAIIKDAGGESLAEPLVLRPTSETIIWNMYSKWIKS 124
Query: 201 YRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTKFA 260
YRDLPL +NQWANV RWE RT+PF+RT EFLWQEGHTAHAT EEA +E + ++D+Y +F
Sbjct: 125 YRDLPLKINQWANVVRWEKRTRPFLRTTEFLWQEGHTAHATEEEALEETLLILDVYKRFI 184
Query: 261 YEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQFTD 320
++ AIPV G+KS+ E FAGA TY+IEA+M DK+ALQA TSH LG NF+ AF +F D
Sbjct: 185 EDYLAIPVFCGKKSEKEKFAGAVSTYSIEALMQDKKALQAATSHYLGLNFAKAFDVKFQD 244
Query: 321 ENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADE-KTGV 379
++G+ +HV+ +SW +STR +G +IM H D+ GL+LPPRIAPI+++++PI+KK DE +
Sbjct: 245 KDGKMRHVFASSWGVSTRLIGALIMVHSDEKGLVLPPRIAPIEIIVIPIFKKEDEINKKI 304
Query: 380 LSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVISR 439
L + + L+K+ RV++D + +PG++F+ E KGIP+R+E+G DV SV ISR
Sbjct: 305 LDYSDCVVDALKKAEFRVEIDKDVRSSPGFRFSSAEFKGIPIRLEVGINDVLLNSVTISR 364
Query: 440 RDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDV-----SSYEE 494
RD + + F + L + VK +LD +Q L +RA +FR N ++ SYE
Sbjct: 365 RD----KDRKFKYQISLDSLISKVKVELDLMQKDLFQRALNFRILNTKEIFRSSKDSYET 420
Query: 495 LKEAIS-MGKWARGPWSASDADELKVKEETGATIRCFPFE---QPQGNKTCFMTGNPAQE 550
K ++ + W S E +K ET ATIRC P + + TC + A+
Sbjct: 421 FKAYVNDYSGFVLSCWCGSLNCENIIKNETKATIRCIPDDFKARDLTGMTCIYCSSKAKY 480
Query: 551 VALFAKSY 558
LFAKSY
Sbjct: 481 FVLFAKSY 488
>sp|A0M4Z3|SYP_GRAFK Proline--tRNA ligase OS=Gramella forsetii (strain KT0803) GN=proS
PE=3 SV=1
Length = 492
Score = 477 bits (1228), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/494 (46%), Positives = 324/494 (65%), Gaps = 22/494 (4%)
Query: 81 ITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNM 140
+T RS+D++ WY +++ A+LA+ VRG MVI+PYGYAIWE +Q L+ FKETGH N
Sbjct: 5 LTKRSEDYSKWYNELVVKADLAENSAVRGCMVIKPYGYAIWEKMQAELDRMFKETGHQNA 64
Query: 141 YFPQFIPYSFIEKEASHVEGFSPELALVT---------------IGGGKELEEKLVVRPT 185
YFP F+P E E + EGF+ E A+VT + +LEE+LVVRPT
Sbjct: 65 YFPLFVPKHLFEAEEKNAEGFAKECAVVTHYRLKNDPDKPGKLMVDPDAKLEEELVVRPT 124
Query: 186 SETIVNHMFTQWIHSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEA 245
SE I+ + + WI SYRDLP+ VNQWANV RWEMRT+ F+RT EFLWQEGHTAHAT +EA
Sbjct: 125 SEAIIWNTYKNWIQSYRDLPIKVNQWANVVRWEMRTRLFLRTAEFLWQEGHTAHATKDEA 184
Query: 246 EKEAMQMIDIYTKFAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHN 305
+E M +IY +FA A+PV+ G K++ E FAGA TY IEA+M D +ALQAGTSH
Sbjct: 185 LEETELMNNIYAEFAENFMAMPVVKGSKTESERFAGALETYCIEALMQDGKALQAGTSHF 244
Query: 306 LGQNFSLAFGTQFTDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVV 365
LGQNF+ AF +F + G +HVW TSW +STR +G +IMTH DD GL+LPP +APIQVV
Sbjct: 245 LGQNFAEAFDVKFATKEGGLEHVWATSWGVSTRLMGALIMTHSDDNGLVLPPNLAPIQVV 304
Query: 366 IVPIWKKADEKTGVLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEI 425
IVPI++ ++ + A + L+ G+ VK D++D + PGWKF +E++G+PLR+ I
Sbjct: 305 IVPIYRSEEQLDQISEVANELVKELRAVGVSVKFDNNDNQKPGWKFAQYELQGVPLRLAI 364
Query: 426 GPRDVSSGSVVISRRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSN 485
GP+D+ G+V ++RRD K+ ++E +K + EIQ +L ++A +R+ +
Sbjct: 365 GPKDLEKGTVELARRDTLTKE-----FVNRSEVVEK-IKALMTEIQDSLFDKAKQYRNEH 418
Query: 486 IVDVSSYEELKEAIS-MGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMT 544
I +V S+++ K+ + G + W + E K+K+ T ATIRC PF++ +G C +T
Sbjct: 419 ITEVDSFDDFKKVLKEKGGFISAHWDGTPETENKIKDLTKATIRCVPFDRKEGAGECVLT 478
Query: 545 GNPAQEVALFAKSY 558
GNP++ LFAK+Y
Sbjct: 479 GNPSEGRVLFAKAY 492
>sp|Q81Z76|SYP2_BACAN Proline--tRNA ligase 2 OS=Bacillus anthracis GN=proS2 PE=3 SV=1
Length = 508
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 231/469 (49%), Positives = 314/469 (66%), Gaps = 14/469 (2%)
Query: 79 RVITPRSQDFNAWYLDVISNAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHS 138
+ IT +DF WY D++ AEL DY V+G M++RPYGYA+WE +Q ++ K K TGH
Sbjct: 7 QAITKMEEDFAQWYTDIVKKAELVDYSSVKGCMILRPYGYALWENMQKVMDEKLKATGHE 66
Query: 139 NMYFPQFIPYSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVNHMFTQWI 198
N+Y P FIP S ++KE HVEGF+PE+A VT GG ++L E+L VRPTSET+ F++ +
Sbjct: 67 NVYMPMFIPESLLQKEKDHVEGFAPEVAWVTHGGDEKLAERLCVRPTSETLFCEHFSKIV 126
Query: 199 HSYRDLPLLVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAEKEAMQMIDIYTK 258
SY DLP L NQW +V RWE T+PF+RT EFLWQEGHT H T EE++ E + ++++Y
Sbjct: 127 QSYNDLPKLYNQWCSVVRWEKTTRPFLRTTEFLWQEGHTIHETAEESQAETLNILNLYAS 186
Query: 259 FAYEHTAIPVIAGRKSKVETFAGASRTYTIEAMMGDKRALQAGTSHNLGQNFSLAFGTQF 318
F ++ AIPVI G+K++ E FAGA TYTIE++M D +ALQ GTSHN G NFS AF +F
Sbjct: 187 FCEDYLAIPVIKGQKTEKEKFAGAKATYTIESLMHDGKALQTGTSHNFGTNFSEAFDIKF 246
Query: 319 TDENGQRQHVWQTSWAISTRFVGGIIMTHGDDTGLMLPPRIAPIQVVIVPIWKKADEKTG 378
D NG+ Q+V QTSW +STR +GG+IM H D+ GL++PP++AP+QVVIVPI A K G
Sbjct: 247 LDRNGKWQYVHQTSWGVSTRMIGGLIMVHSDNNGLVMPPKVAPVQVVIVPI---AQHKEG 303
Query: 379 VLSAALSAKEVLQKSGIRVKLDDSDQRTPGWKFNFWEMKGIPLRIEIGPRDVSSGSVVIS 438
VL+ A + +QK RVK+D S+ +TPGWKFN +EMKGIP+R+E+GP+D+ VV+
Sbjct: 304 VLAKATELQGHIQKVA-RVKIDASN-KTPGWKFNEYEMKGIPIRLEVGPKDIEKNQVVLV 361
Query: 439 RRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSALLERATSFRDSNIVDVSSYEELKE- 497
RRD K+ ISM+ LE + L+EI ++L +A FRD N V+++EE+K+
Sbjct: 362 RRDTKEKE----FISMDQ--LEERIPALLEEIHNSLFNKAKVFRDENTYSVTNFEEMKKL 415
Query: 498 AISMGKWARGPWSASDADELKVKEETGATIRCFPFEQPQGNKTCFMTGN 546
A + + W A E K+KEE + RC PFEQ + C N
Sbjct: 416 ADEKQGFIKAMWCGELACEEKLKEEVAS--RCMPFEQEHLAEECVCCVN 462
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 214,862,257
Number of Sequences: 539616
Number of extensions: 9211481
Number of successful extensions: 26799
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 1121
Number of HSP's that attempted gapping in prelim test: 23636
Number of HSP's gapped (non-prelim): 2551
length of query: 558
length of database: 191,569,459
effective HSP length: 123
effective length of query: 435
effective length of database: 125,196,691
effective search space: 54460560585
effective search space used: 54460560585
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)