BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>048001
MYIAITLKRYRAVKEVGKIKMSVGVIAYYQLVQVCQAEYFRQLLKPVT

High Scoring Gene Products

Symbol, full name Information P value
CPuORF35
conserved peptide upstream open reading frame 35 		protein from Arabidopsis thaliana 7.6e-09

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  048001
        (48 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:4515102609 - symbol:CPuORF35 "conserved peptid...   132  7.6e-09   1


>TAIR|locus:4515102609 [details] [associations]
            symbol:CPuORF35 "conserved peptide upstream open
            reading frame 35" species:3702 "Arabidopsis thaliana" [GO:0005739
            "mitochondrion" evidence=ISM] EMBL:CP002684
            GenomeReviews:CT485782_GR EMBL:AC022455 UniGene:At.43371
            GeneID:6240759 KEGG:ath:AT1G29951 IPI:IPI00892106
            RefSeq:NP_001117386.1 EnsemblPlants:AT1G29951.1 TAIR:At1g29951
            eggNOG:NOG298811 Genevestigator:B3H687 Uniprot:B3H687
        Length = 48

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 29/48 (60%), Positives = 33/48 (68%)

Query:     1 MYIAITLKRYRAVKEVGKIKMSVGVIAYYQLVQVCQAEYFRQLLKPVT 48
             M I    K  R++KE+G   M+   IA YQ VQVCQAEYFRQLLKPVT
Sbjct:     1 MCIVGNKKGNRSLKEIGTFMMTTCFIANYQSVQVCQAEYFRQLLKPVT 48


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.329   0.140   0.393    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       48        48   0.00091  102 3  11 22  0.39    26
                                                     29  0.36    26


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  340 (36 KB)
  Total size of DFA:  56 KB (2058 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  5.01u 0.29s 5.30t   Elapsed:  00:00:00
  Total cpu time:  5.01u 0.29s 5.30t   Elapsed:  00:00:00
  Start:  Fri May 10 04:48:08 2013   End:  Fri May 10 04:48:08 2013

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