Query 048002
Match_columns 351
No_of_seqs 276 out of 1793
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 08:52:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048002.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048002hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnx_A Papain; hydrolase, cyto 100.0 9.3E-81 3.2E-85 593.6 29.6 295 19-337 49-362 (363)
2 1pci_A Procaricain; zymogen, h 100.0 3.9E-79 1.3E-83 577.4 27.9 299 19-338 5-322 (322)
3 3qj3_A Cathepsin L-like protei 100.0 4.5E-78 1.5E-82 571.8 26.5 287 25-337 11-331 (331)
4 3qt4_A Cathepsin-L-like midgut 100.0 5.4E-77 1.9E-81 563.1 24.3 283 28-337 19-329 (329)
5 1by8_A Protein (procathepsin K 100.0 8.1E-77 2.8E-81 560.1 24.0 282 31-337 6-314 (314)
6 2c0y_A Procathepsin S; proenzy 100.0 2.2E-76 7.4E-81 557.4 22.2 283 29-337 5-315 (315)
7 1cs8_A Human procathepsin L; p 100.0 8.8E-76 3E-80 553.5 23.0 279 31-337 7-316 (316)
8 2o6x_A Procathepsin L1, secret 100.0 5.4E-75 1.9E-79 546.7 22.6 276 34-338 3-307 (310)
9 1xkg_A DER P I, major mite fec 100.0 2.9E-71 9.9E-76 520.8 22.6 270 35-341 7-306 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 1.7E-65 5.9E-70 500.4 20.5 262 50-336 135-434 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 1.5E-63 5.2E-68 471.1 15.4 271 53-341 2-316 (325)
12 1cqd_A Protein (protease II); 100.0 3.5E-60 1.2E-64 426.4 19.9 201 121-340 2-220 (221)
13 3p5u_A Actinidin; SAD, cystein 100.0 5.7E-60 1.9E-64 424.9 17.4 198 122-338 1-218 (220)
14 1ppo_A Protease omega; hydrola 100.0 8.9E-60 3E-64 422.3 18.3 198 122-338 1-216 (216)
15 1yal_A Chymopapain; hydrolase, 100.0 1.3E-59 4.5E-64 421.8 19.3 199 122-339 1-217 (218)
16 3pbh_A Procathepsin B; thiol p 100.0 6E-60 2.1E-64 445.6 17.6 253 62-336 11-313 (317)
17 1iwd_A Ervatamin B; cysteine p 100.0 1.5E-59 5.1E-64 420.5 19.2 196 122-337 1-214 (215)
18 2fo5_A Cysteine proteinase EP- 100.0 6.9E-60 2.4E-64 433.4 16.7 209 120-343 2-230 (262)
19 1s4v_A Cysteine endopeptidase; 100.0 1.3E-59 4.5E-64 424.7 18.0 205 121-342 1-224 (229)
20 3u8e_A Papain-like cysteine pr 100.0 1.6E-59 5.4E-64 422.5 16.5 198 122-339 1-221 (222)
21 3kwz_A Cathepsin K; enzyme inh 100.0 2.8E-59 9.6E-64 419.1 17.4 194 122-337 1-215 (215)
22 3ioq_A CMS1MS2; caricaceae, cy 100.0 7.5E-59 2.6E-63 415.6 18.1 194 122-338 1-212 (213)
23 2cio_A Papain; hydrolase/inhib 100.0 1.5E-58 5.3E-63 413.1 20.1 194 122-338 1-212 (212)
24 2b1m_A SPE31; papain-like, sug 100.0 1.1E-58 3.9E-63 422.7 19.4 202 121-343 1-230 (246)
25 2bdz_A Mexicain; cysteine prot 100.0 2.3E-58 7.8E-63 412.5 19.4 195 122-339 1-213 (214)
26 2oul_A Falcipain 2; cysteine p 100.0 2.3E-58 7.9E-63 419.7 19.0 199 119-338 15-241 (241)
27 3ovx_A Cathepsin S; hydrolase, 100.0 1.1E-58 3.6E-63 416.2 15.8 194 122-337 2-218 (218)
28 3bwk_A Cysteine protease falci 100.0 2.5E-58 8.5E-63 420.0 17.5 199 119-338 17-243 (243)
29 1o0e_A Ervatamin C; plant cyst 100.0 9.6E-58 3.3E-62 406.7 19.1 189 122-337 1-207 (208)
30 1m6d_A Cathepsin F, catsf; pap 100.0 5.3E-58 1.8E-62 410.4 16.7 191 122-338 1-214 (214)
31 2xu3_A Cathepsin L1; hydrolase 100.0 9E-58 3.1E-62 410.6 17.7 194 122-337 1-220 (220)
32 3f5v_A DER P 1 allergen; aller 100.0 5.1E-58 1.7E-62 412.9 15.9 192 120-337 8-222 (222)
33 3f75_A Toxopain-2, cathepsin L 100.0 2.8E-58 9.7E-63 415.1 14.1 199 120-337 5-224 (224)
34 3i06_A Cruzipain; autocatalyti 100.0 1.5E-57 5E-62 407.7 18.6 190 122-337 1-214 (215)
35 8pch_A Cathepsin H; hydrolase, 100.0 9.7E-58 3.3E-62 410.5 15.3 192 122-337 1-218 (220)
36 3cbj_A Cathepsin B; cathepsin 100.0 6.8E-53 2.3E-57 389.1 17.6 205 120-340 5-260 (266)
37 3qsd_A Cathepsin B-like peptid 100.0 8.7E-53 3E-57 386.0 16.2 202 121-336 2-252 (254)
38 1deu_A Procathepsin X; cystein 100.0 1.4E-52 4.7E-57 388.7 15.9 210 118-337 32-275 (277)
39 2wbf_X Serine-repeat antigen p 100.0 3.1E-48 1.1E-52 358.1 18.0 207 124-337 9-261 (265)
40 3ois_A Cysteine protease; alph 100.0 1.5E-46 5.1E-51 351.0 10.2 226 76-320 14-274 (291)
41 2e01_A Cysteine proteinase 1; 100.0 1.9E-35 6.4E-40 287.2 15.4 89 121-210 52-169 (457)
42 2cb5_A Protein (bleomycin hydr 100.0 1.6E-35 5.4E-40 287.4 14.1 92 121-213 47-169 (453)
43 3pw3_A Aminopeptidase C; bleom 100.0 1.9E-31 6.6E-36 253.8 13.6 76 133-209 21-108 (383)
44 3f75_P Toxopain-2, cathepsin L 99.8 1.5E-18 5.1E-23 136.1 9.1 74 27-100 16-90 (106)
45 2l95_A Crammer, LP06209P; cyst 99.7 4.9E-17 1.7E-21 121.8 5.5 64 34-99 8-76 (80)
46 1x9y_A Cysteine proteinase; ha 76.1 26 0.00087 32.4 11.0 120 139-317 202-337 (367)
47 1pxv_A Cysteine protease; hydr 74.4 36 0.0012 28.2 11.1 121 139-318 26-162 (183)
48 1cv8_A Staphopain; cysteine pr 49.8 1.1E+02 0.0037 25.2 11.6 120 139-317 17-152 (174)
49 1th5_A NIFU1; iron-sulfur clus 20.2 30 0.001 24.3 0.7 26 134-161 37-62 (74)
No 1
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=9.3e-81 Score=593.59 Aligned_cols=295 Identities=42% Similarity=0.777 Sum_probs=255.0
Q ss_pred ccCCccccCCHHHHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHHHccCCCCeEEEcccCCCCChhhhhhhcCC
Q 048002 19 FDYQESDLASEECLWDLYERWRSHH-TVSRDLKEKQIRFNVFKQNLKRIHKVNQMDKPYKLRLNRFADMTNHEFMSSRSS 97 (351)
Q Consensus 19 ~~~~~~~~~~~~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~~~s~~~g~N~FsD~t~eEf~~~~~~ 97 (351)
+.+++.++++++.+.++|++||++| |.|.+.+|+.+|+.||++|+++|++||+++.+|++|+|+|+|||.+||++++++
T Consensus 49 ~~y~~~dl~s~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~~~sy~~g~N~FaDlT~eEf~~~~~~ 128 (363)
T 3tnx_A 49 VGYSQNDLTSTERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTG 128 (363)
T ss_dssp -----CCSSCHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTSCCSEEECSCTTTTSCHHHHHHHHSC
T ss_pred cCCChhhhcCHHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcCCCCeEEeccccccCCHHHHHHHhcc
Confidence 4677888999999999999999999 999999999999999999999999999999999999999999999999999887
Q ss_pred ccccCccCCCCCCccccccCCCCCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhc
Q 048002 98 KVSHHRMLHGPRRQTGFMHGKTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDC 177 (351)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc 177 (351)
.............. ........+||++||||++|+|+||||||.||||||||++++||++++|++++++.||+|+|+||
T Consensus 129 ~~~~~~~~~~~~~~-~~~~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC 207 (363)
T 3tnx_A 129 SIAGNYTTTELSYE-EVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDC 207 (363)
T ss_dssp SSCSCCCCSSSSSS-CCCCCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHH
T ss_pred cccccccccccccc-cccCcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcc
Confidence 65421111110000 11112235799999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchHHHHHHHHHcCCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChH
Q 048002 178 DKDNHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDE 257 (351)
Q Consensus 178 ~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~ 257 (351)
+..+.||+||++..|+.|+.++ ||++|.+|||.+.++.|.... ......++.++..++..++
T Consensus 208 ~~~~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~c~~~~-----------------~~~~~~~~~~~~~~~~~~e 269 (363)
T 3tnx_A 208 DRRSYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSRE-----------------KGPYAAKTDGVRQVQPYNE 269 (363)
T ss_dssp CTTSCTTBCCCHHHHHHHHHHT-CBCBTTTSCCCSSCCCCCGGG-----------------GCSCSBCCCEEEEECSSCH
T ss_pred cCCCCCCCCCChHHHHhHHHhc-CccccccCCCcCcCCCcccCC-----------------CCCceeeccceEEcchhhH
Confidence 9988999999999999999987 999999999999888776543 1234556778888888899
Q ss_pred HHHHHHHhcCCEEEEEecCCCCccCCCC------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecC
Q 048002 258 NALMKAVANQPVAVAIDAGGKDFQFYSE------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGI 319 (351)
Q Consensus 258 ~~i~~~l~~gPV~v~~~~~~~~f~~Y~~------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~ 319 (351)
.+++.+|++|||+|+|++...+|++|++ |||+ +|||||||||++|||+|||||+||.
T Consensus 270 ~~l~~~v~~gPvsvai~a~~~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~-----~YWIVKNSWGt~WGe~GY~rI~Rg~ 344 (363)
T 3tnx_A 270 GALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP-----NYILIRNSWGTGWGENGYIRIKRGT 344 (363)
T ss_dssp HHHHHHHTTSCEEEEECCCSHHHHTEEEEEECCCCCSCCCEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECCS
T ss_pred HHHHHHHHcCCcEEEEEecchhhhCCCCCEECCCCCCCCCeEEEEEEcCC-----CcEEEEeCCCCccccCcEEEEEcCC
Confidence 9999999999999999987678999987 8876 3999999999999999999999999
Q ss_pred CCCCCCcccccccceeee
Q 048002 320 DAEEGLCGITLEASYPVK 337 (351)
Q Consensus 320 ~~~~~~Cgi~~~~~yp~~ 337 (351)
++..|+|||+++++||+.
T Consensus 345 ~~~~~~CGI~~~a~yPik 362 (363)
T 3tnx_A 345 GNSYGVCGLYTSSFYPVK 362 (363)
T ss_dssp CCSSCGGGTTSCEEEEEC
T ss_pred CCCCCcCCccceeeeccc
Confidence 887799999999999985
No 2
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=3.9e-79 Score=577.43 Aligned_cols=299 Identities=43% Similarity=0.824 Sum_probs=255.0
Q ss_pred ccCCccccCCHHHHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHHHccCCCCeEEEcccCCCCChhhhhhhcCC
Q 048002 19 FDYQESDLASEECLWDLYERWRSHH-TVSRDLKEKQIRFNVFKQNLKRIHKVNQMDKPYKLRLNRFADMTNHEFMSSRSS 97 (351)
Q Consensus 19 ~~~~~~~~~~~~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~~~s~~~g~N~FsD~t~eEf~~~~~~ 97 (351)
+.+...++++++.+..+|++||++| |.|.+.+|+.+|+.+|++|+++|++||+++.+|++|+|+|+|||.+||++++++
T Consensus 5 ~~~~~~~~~~e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~~~~g~N~FaDlt~eEf~~~~~g 84 (322)
T 1pci_A 5 VGYSQDDLTSTERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKKNNSYWLGLNEFADLSNDEFNEKYVG 84 (322)
T ss_dssp -------CTHHHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSCTTTTSCHHHHHHHHCC
T ss_pred ccCCcccccchHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCceEEecCccccCCHHHHHHHhcC
Confidence 4455556778889999999999999 999989999999999999999999999988899999999999999999998877
Q ss_pred ccccCccCCCCCCccccccCCCCCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhc
Q 048002 98 KVSHHRMLHGPRRQTGFMHGKTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDC 177 (351)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc 177 (351)
............. .+......+||++||||++|+|+||||||.||||||||++++||++++|++++.+.||+|+|+||
T Consensus 85 ~~~~~~~~~~~~~--~~~~~~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC 162 (322)
T 1pci_A 85 SLIDATIEQSYDE--EFINEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDC 162 (322)
T ss_dssp CBCCCSSCCCCSE--ECCCCCCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHS
T ss_pred CCCcccccccccc--ccccccccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhh
Confidence 5432111000000 12222334799999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCchHHHHHHHHHcCCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChH
Q 048002 178 DKDNHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDE 257 (351)
Q Consensus 178 ~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~ 257 (351)
+..+.||+||++..|++|+.++ ||++|.+|||.+..+.|.... .....++|.+|..++..++
T Consensus 163 ~~~~~gC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~-----------------~~~~~~~i~~~~~v~~~~e 224 (322)
T 1pci_A 163 ERRSHGCKGGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQ-----------------VGGPIVKTSGVGRVQPNNE 224 (322)
T ss_dssp CTTSCGGGCBCHHHHHHHHHHH-CBCBTTTSCCCSSCCCCTTTT-----------------CCSCCBCCCCEEECCSSBH
T ss_pred cCCCCCCCCCCHHHHHHHHHHh-CCCchhhCCCCCCCCCCCCCC-----------------CCCceEEEeeEEEeCCCcH
Confidence 9778899999999999999998 899999999999989998653 1224567899999988889
Q ss_pred HHHHHHHhcCCEEEEEecCCCCccCCCC------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecC
Q 048002 258 NALMKAVANQPVAVAIDAGGKDFQFYSE------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGI 319 (351)
Q Consensus 258 ~~i~~~l~~gPV~v~~~~~~~~f~~Y~~------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~ 319 (351)
++|+++|++|||+|+|+++..+|++|++ |||++ +|++|||||||||++|||+|||||+|+.
T Consensus 225 ~~l~~~l~~GPV~v~i~~~~~~f~~Y~~Gvy~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~ 303 (322)
T 1pci_A 225 GNLLNAIAKQPVSVVVESKGRPFQLYKGGIFEGPCGTKVDGAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAP 303 (322)
T ss_dssp HHHHHHHHHSCEEEEECTTCHHHHTEEEEEECCSCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCSSSTBTTEEEEECCC
T ss_pred HHHHHHHHHCCEEEEEecccccccccCCeEeCCCCCCCCCEEEEEEEEecc-CCccEEEEEeCCCCcccCCeEEEEEcCC
Confidence 9999999889999999997568999886 99987 7999999999999999999999999997
Q ss_pred CCCCCCcccccccceeeec
Q 048002 320 DAEEGLCGITLEASYPVKL 338 (351)
Q Consensus 320 ~~~~~~Cgi~~~~~yp~~~ 338 (351)
+...|.|||+++++||++.
T Consensus 304 ~~~~n~CgI~~~~~yp~~~ 322 (322)
T 1pci_A 304 GNSPGVCGLYKSSYYPTKN 322 (322)
T ss_dssp SBSSCGGGGGGCCEEECCC
T ss_pred CCCCCcCCcccceeEEEeC
Confidence 5445789999999999863
No 3
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=4.5e-78 Score=571.82 Aligned_cols=287 Identities=36% Similarity=0.649 Sum_probs=250.7
Q ss_pred ccCCHHHHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHHHccC----CCCeEEEcccCCCCChhhhhhhcCCcc
Q 048002 25 DLASEECLWDLYERWRSHH-TVSRDLKEKQIRFNVFKQNLKRIHKVNQM----DKPYKLRLNRFADMTNHEFMSSRSSKV 99 (351)
Q Consensus 25 ~~~~~~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~----~~s~~~g~N~FsD~t~eEf~~~~~~~~ 99 (351)
+...+..+..+|++||++| |.|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++++++..
T Consensus 11 ~~~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~ 90 (331)
T 3qj3_A 11 SALPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLI 90 (331)
T ss_dssp --CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCC
T ss_pred CCCCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccc
Confidence 3467788899999999999 99998899999999999999999999986 489999999999999999999888755
Q ss_pred ccCccCCCCCCccccccC------CCCCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCC--CccCCH
Q 048002 100 SHHRMLHGPRRQTGFMHG------KTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGE--LWSLSE 171 (351)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~------~~~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~--~~~lS~ 171 (351)
.+...... .. .+... ...+||++||||++|+||||||||.||||||||++++||++++++++. ++.||+
T Consensus 91 ~~~~~~~~--~~-~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSe 167 (331)
T 3qj3_A 91 MPADLHKN--GI-PIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSE 167 (331)
T ss_dssp CCSSTTTT--CE-EECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCH
T ss_pred cccccccc--Cc-ccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCH
Confidence 42111000 00 01111 234799999999999999999999999999999999999999999998 899999
Q ss_pred HHhhhcCCCCCCCCCCchHHHHHHHHHcCCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEE
Q 048002 172 QELVDCDKDNHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEM 251 (351)
Q Consensus 172 q~l~dc~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 251 (351)
|+|+||+..+.||+||++..|++|+.+++||++|++|||.+.++.|.... ....+++.+|..
T Consensus 168 Q~LvdC~~~~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~------------------~~~~~~i~~~~~ 229 (331)
T 3qj3_A 168 QQLVDCVPNALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYDP------------------NQVAARLSGYVY 229 (331)
T ss_dssp HHHHHHCTTSCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCT------------------TSEEECCSEEEE
T ss_pred HHHhhhccCCCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCCc------------------ccceeEeeEEEE
Confidence 99999998889999999999999999888999999999999999998764 345678899999
Q ss_pred cCCChHHHHHHHHh-cCCEEEEEecCCCCccCCCC--------------------ccccCCCCccEEEEEcCCCCCccCC
Q 048002 252 VPESDENALMKAVA-NQPVAVAIDAGGKDFQFYSE--------------------GYGATQDGTKYWIVKNSWGTDWEEK 310 (351)
Q Consensus 252 v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~Y~~--------------------Gyg~~~~g~~yWivkNSWG~~WGe~ 310 (351)
++..++++|+++|. +|||+|+|++. .+|++|++ |||++ +|++|||||||||++|||+
T Consensus 230 v~~~~e~~lk~al~~~GPV~v~i~a~-~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~ 307 (331)
T 3qj3_A 230 LSGPDENMLADMVATKGPVAVAFDAD-DPFGSYSGGVYYNPTCETNKFTHAVLIVGYGNE-NGQDYWLVKNSWGDGWGLD 307 (331)
T ss_dssp ESSCCHHHHHHHHHHHCCEEEEECCC-TTGGGEEEEEECCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBT
T ss_pred eCCCCHHHHHHHHHhCCCEEEEEEcc-cccccccCceEeCCCCCCCcCCEEEEEEEEecc-CCceEEEEEcCCCCCcCCC
Confidence 98888999999995 59999999998 45999876 99987 8999999999999999999
Q ss_pred ceEEEEecCCCCCCCcccccccceeee
Q 048002 311 GYIRMLRGIDAEEGLCGITLEASYPVK 337 (351)
Q Consensus 311 Gy~~i~r~~~~~~~~Cgi~~~~~yp~~ 337 (351)
|||||+|+.+ |.|||+++++||++
T Consensus 308 GY~~i~r~~~---n~CgI~~~~~~p~v 331 (331)
T 3qj3_A 308 GYFKIARNAN---NHCGIAGVASVPTL 331 (331)
T ss_dssp TEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred CEEEEEcCCC---CccCcCCceeeeeC
Confidence 9999999963 56999999999985
No 4
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=5.4e-77 Score=563.14 Aligned_cols=283 Identities=40% Similarity=0.751 Sum_probs=244.1
Q ss_pred CHHHHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHHHccC----CCCeEEEcccCCCCChhhhhhhcCCccccC
Q 048002 28 SEECLWDLYERWRSHH-TVSRDLKEKQIRFNVFKQNLKRIHKVNQM----DKPYKLRLNRFADMTNHEFMSSRSSKVSHH 102 (351)
Q Consensus 28 ~~~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~----~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~ 102 (351)
++..+...|++||++| |.|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++ +++.....
T Consensus 19 ~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~~~ 97 (329)
T 3qt4_A 19 PKSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGKAQ 97 (329)
T ss_dssp -CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTCCC
T ss_pred CHHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCcccc
Confidence 4567888999999999 99998899999999999999999999984 479999999999999999998 76654311
Q ss_pred ccCCCCCCccccccCCCCCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCC--C
Q 048002 103 RMLHGPRRQTGFMHGKTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDK--D 180 (351)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~--~ 180 (351)
...........+.... .+||++||||++ +||||||||.||||||||++++||+++++++++++.||+|+|+||+. .
T Consensus 98 ~~~~~~~~~~~~~~~~-~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~~g 175 (329)
T 3qt4_A 98 KPKHPENLRMPYVSSK-KPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSSYG 175 (329)
T ss_dssp ------CCEEECCCCC-SCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGT
T ss_pred cccccccccccccCCc-cCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhccccC
Confidence 0000000000122122 479999999999 99999999999999999999999999999999999999999999997 4
Q ss_pred CCCCCCCchHHHHHHHHHcCCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHH
Q 048002 181 NHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENAL 260 (351)
Q Consensus 181 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i 260 (351)
+.||+||++..|++|+.++ ||++|++|||.+.++.|...+ ....++|.+|..++..++++|
T Consensus 176 ~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~------------------~~~~~~i~~~~~v~~~~e~~l 236 (329)
T 3qt4_A 176 NAGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQGDYCRFDS------------------SQSVTTLSGYYDLPSGDENSL 236 (329)
T ss_dssp CCTTBCCCHHHHHHHHHHS-CBCBTTTSCCCSSCCCCCCCG------------------GGCCBCCSEEEECCTTCHHHH
T ss_pred CCCCCCCChhHHHHHHHHc-CCCcHHHeeeecCCCCCCCCc------------------ccceEEeceEEEecCCCHHHH
Confidence 7899999999999999998 999999999999999998754 234567899999988889999
Q ss_pred HHHHh-cCCEEEEEecCCCCccCCCC--------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecC
Q 048002 261 MKAVA-NQPVAVAIDAGGKDFQFYSE--------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGI 319 (351)
Q Consensus 261 ~~~l~-~gPV~v~~~~~~~~f~~Y~~--------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~ 319 (351)
+++|. +|||+|+|++. .+|++|++ |||++ +|++|||||||||++|||+|||||+|+.
T Consensus 237 k~al~~~GPV~v~i~a~-~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~ 314 (329)
T 3qt4_A 237 ADAVGQAGPVAVAIDAT-DELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSD-NGQDYWILKNSWGSGWGESGYWRQVRNY 314 (329)
T ss_dssp HHHHHHTCCEEEEECCC-GGGTTEEEEEECCSSCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSS
T ss_pred HHHHHhCCCEEEEEecC-hhhhhccCceeecCCCCCCcCCEEEEEEEEEee-CCccEEEEEeCCCCcccCCcEEEEEeCC
Confidence 99995 58999999998 59999986 99987 8999999999999999999999999996
Q ss_pred CCCCCCcccccccceeee
Q 048002 320 DAEEGLCGITLEASYPVK 337 (351)
Q Consensus 320 ~~~~~~Cgi~~~~~yp~~ 337 (351)
+ |.|||+++++||++
T Consensus 315 ~---n~CgI~~~~~yp~v 329 (329)
T 3qt4_A 315 G---NNCGIATAASYPAL 329 (329)
T ss_dssp S---SGGGTTTTCEEEEC
T ss_pred C---CccCCCCceeEeeC
Confidence 3 56999999999985
No 5
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=8.1e-77 Score=560.06 Aligned_cols=282 Identities=41% Similarity=0.705 Sum_probs=243.7
Q ss_pred HHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHHHccC----CCCeEEEcccCCCCChhhhhhhcCCccccCccC
Q 048002 31 CLWDLYERWRSHH-TVSRDLKEKQIRFNVFKQNLKRIHKVNQM----DKPYKLRLNRFADMTNHEFMSSRSSKVSHHRML 105 (351)
Q Consensus 31 ~~~~~f~~~~~~~-k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~----~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~~~ 105 (351)
.+..+|++||++| |.|.+.+|+.+|+.||++|+++|++||++ ..+|++|+|+|+|||.+||++++++........
T Consensus 6 ~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~ 85 (314)
T 1by8_A 6 ILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSHS 85 (314)
T ss_dssp THHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSCCC
T ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCcccc
Confidence 5677999999999 99998899999999999999999999975 278999999999999999998887755421110
Q ss_pred CCCCCccccccC-CCCCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCC
Q 048002 106 HGPRRQTGFMHG-KTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGC 184 (351)
Q Consensus 106 ~~~~~~~~~~~~-~~~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC 184 (351)
... . .+... ....||++||||++|+|+||||||.||||||||++++||++++|++++.+.||+|+|+||+..+.||
T Consensus 86 ~~~-~--~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~gC 162 (314)
T 1by8_A 86 RSN-D--TLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGC 162 (314)
T ss_dssp CSS-S--SSBCCCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCTTSCGG
T ss_pred cCC-c--cccccccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCCCCCC
Confidence 000 0 11111 1223999999999999999999999999999999999999999999999999999999999778899
Q ss_pred CCCchHHHHHHHHHcCCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHH
Q 048002 185 DGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAV 264 (351)
Q Consensus 185 ~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l 264 (351)
+||++..|++|+.++.||++|++|||.+..+.|...+ ....++|.+|..++..++++|+++|
T Consensus 163 ~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~------------------~~~~~~i~~~~~v~~~~~~~i~~al 224 (314)
T 1by8_A 163 GGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNP------------------TGKAAKCRGYREIPEGNEKALKRAV 224 (314)
T ss_dssp GCCCSHHHHHHHHHTTCBCBTTTSCCCSSCCCCCCCG------------------GGCCBCCSCEEECCSSCHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcCCcCcHhhCCCCCCCCCcCCCC------------------ccceeEECcEEEecCCCHHHHHHHH
Confidence 9999999999998656999999999999988998653 1234678899999877899999999
Q ss_pred h-cCCEEEEEecCCCCccCCCC--------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCC
Q 048002 265 A-NQPVAVAIDAGGKDFQFYSE--------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEE 323 (351)
Q Consensus 265 ~-~gPV~v~~~~~~~~f~~Y~~--------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~ 323 (351)
. +|||+|+|+++..+|++|++ |||++ +|++|||||||||++|||+|||||+|+.+
T Consensus 225 ~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~--- 300 (314)
T 1by8_A 225 ARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKN--- 300 (314)
T ss_dssp HHHCCEEEEECCCSHHHHTEEEECBCCTTCCSSCCCEEEEEEEEEEE-TTEEEEEEECSBTTTSTBTTEEEECCSSS---
T ss_pred HHcCCEEEEEEeChHHhhhccCceecCCCCCCCCCCeEEEEEEEecc-CCceEEEEEcCCCCCcCcCCEEEEEcCCC---
Confidence 5 59999999997568998876 99987 89999999999999999999999999852
Q ss_pred CCcccccccceeee
Q 048002 324 GLCGITLEASYPVK 337 (351)
Q Consensus 324 ~~Cgi~~~~~yp~~ 337 (351)
|.|||+++++||++
T Consensus 301 n~CgI~~~~~~p~~ 314 (314)
T 1by8_A 301 NACGIANLASFPKM 314 (314)
T ss_dssp CGGGTTSSCEEECC
T ss_pred CcCCccCeeEEeeC
Confidence 56999999999974
No 6
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=2.2e-76 Score=557.38 Aligned_cols=283 Identities=39% Similarity=0.687 Sum_probs=243.0
Q ss_pred HHHHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHHHccC----CCCeEEEcccCCCCChhhhhhhcCCccccCc
Q 048002 29 EECLWDLYERWRSHH-TVSRDLKEKQIRFNVFKQNLKRIHKVNQM----DKPYKLRLNRFADMTNHEFMSSRSSKVSHHR 103 (351)
Q Consensus 29 ~~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~----~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~ 103 (351)
+..+..+|++||++| |.|.+.+|+.+|+.||++|+++|++||++ ..+|++|+|+|+|||.+||++++++......
T Consensus 5 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 84 (315)
T 2c0y_A 5 DPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQ 84 (315)
T ss_dssp CGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCG
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCcc
Confidence 345678999999999 99988889999999999999999999975 2799999999999999999988877554211
Q ss_pred cCCCCCCccccccCCCCCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcC-C--C
Q 048002 104 MLHGPRRQTGFMHGKTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCD-K--D 180 (351)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~-~--~ 180 (351)
.... . .+......+||++||||++|+|+||||||.||||||||++++||++++|++++.+.||+|+|+||+ . .
T Consensus 85 ~~~~--~--~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~~ 160 (315)
T 2c0y_A 85 WQRN--I--TYKSNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYG 160 (315)
T ss_dssp GGSC--B--CC------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGT
T ss_pred ccCC--c--cccCcccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhcccccC
Confidence 1000 0 111111236999999999999999999999999999999999999999999999999999999998 4 5
Q ss_pred CCCCCCCchHHHHHHHHHcCCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHH
Q 048002 181 NHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENAL 260 (351)
Q Consensus 181 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i 260 (351)
+.||+||++..|++|+.++.||++|++|||.+..+.|...+ ....++|.+|..++..++++|
T Consensus 161 ~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~------------------~~~~~~i~~~~~v~~~~~~~i 222 (315)
T 2c0y_A 161 NKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDS------------------KYRAATCSKYTELPYGREDVL 222 (315)
T ss_dssp CCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG------------------GGEEECCCEEEECCTTCHHHH
T ss_pred CCCCCCCCHHHHHHHHHHhCCcCchhcCCCccCCCCcccCC------------------cccccccCCeEEeCCCCHHHH
Confidence 89999999999999998656999999999999989998654 223567889999987789999
Q ss_pred HHHHh-cCCEEEEEecCCCCccCCCC-------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCC
Q 048002 261 MKAVA-NQPVAVAIDAGGKDFQFYSE-------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGID 320 (351)
Q Consensus 261 ~~~l~-~gPV~v~~~~~~~~f~~Y~~-------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~ 320 (351)
+++|. +|||+|+|+++..+|++|++ |||++ +|++|||||||||++|||+|||||+|+.+
T Consensus 223 ~~al~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~ 301 (315)
T 2c0y_A 223 KEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARNKG 301 (315)
T ss_dssp HHHHHHTCCEEEEECCCSHHHHTEEEEEECCTTCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS
T ss_pred HHHHHHcCCEEEEEecCchhhhccCCCcccCCCCCCcCCEEEEEEEEeec-CCCcEEEEEcCCCCCcCCCcEEEEEcCCC
Confidence 99995 58999999997568999876 99987 89999999999999999999999999852
Q ss_pred CCCCCcccccccceeee
Q 048002 321 AEEGLCGITLEASYPVK 337 (351)
Q Consensus 321 ~~~~~Cgi~~~~~yp~~ 337 (351)
|.|||+++++||++
T Consensus 302 ---n~CgI~~~~~~p~~ 315 (315)
T 2c0y_A 302 ---NHCGIASFPSYPEI 315 (315)
T ss_dssp ---SGGGTTTSCEEEEC
T ss_pred ---CccCcCceeEEeeC
Confidence 56999999999984
No 7
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=8.8e-76 Score=553.46 Aligned_cols=279 Identities=42% Similarity=0.773 Sum_probs=241.2
Q ss_pred HHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHHHccC----CCCeEEEcccCCCCChhhhhhhcCCccccCccC
Q 048002 31 CLWDLYERWRSHH-TVSRDLKEKQIRFNVFKQNLKRIHKVNQM----DKPYKLRLNRFADMTNHEFMSSRSSKVSHHRML 105 (351)
Q Consensus 31 ~~~~~f~~~~~~~-k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~----~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~~~ 105 (351)
.+..+|++||++| |.| +.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.+||++++++.......
T Consensus 7 ~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~- 84 (316)
T 1cs8_A 7 SLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR- 84 (316)
T ss_dssp GGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCS-
T ss_pred HHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCccc-
Confidence 4677999999999 999 8889999999999999999999975 47999999999999999999888775431110
Q ss_pred CCCCCccccccCCCCCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCC--CCCC
Q 048002 106 HGPRRQTGFMHGKTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDK--DNHG 183 (351)
Q Consensus 106 ~~~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~--~~~g 183 (351)
... .+......+||++||||++|+|+||||||.||||||||++++||++++|++++.+.||+|+|+||+. .+.|
T Consensus 85 --~~~--~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~g 160 (316)
T 1cs8_A 85 --KGK--VFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEG 160 (316)
T ss_dssp --CCE--ECCCCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCG
T ss_pred --cCc--cccCccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCCC
Confidence 000 1111222469999999999999999999999999999999999999999999999999999999986 4789
Q ss_pred CCCCchHHHHHHHHHcCCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHH
Q 048002 184 CDGGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKA 263 (351)
Q Consensus 184 C~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~ 263 (351)
|+||++..|++|+.++.||++|++|||.+..+.|...+ ....+++.+|..++. ++++|+++
T Consensus 161 C~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~------------------~~~~~~i~~~~~v~~-~~~~ik~~ 221 (316)
T 1cs8_A 161 CNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNP------------------KYSVANDAGFVDIPK-QEKALMKA 221 (316)
T ss_dssp GGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG------------------GGEEECCCCEEECCS-CHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCcCchhccCCCCCCCCcCCCC------------------ccceeEeccEEEeCC-CHHHHHHH
Confidence 99999999999997545999999999999988998653 234567889999987 89999999
Q ss_pred Hh-cCCEEEEEecCCCCccCCCC--------------------ccc---cCCCCccEEEEEcCCCCCccCCceEEEEecC
Q 048002 264 VA-NQPVAVAIDAGGKDFQFYSE--------------------GYG---ATQDGTKYWIVKNSWGTDWEEKGYIRMLRGI 319 (351)
Q Consensus 264 l~-~gPV~v~~~~~~~~f~~Y~~--------------------Gyg---~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~ 319 (351)
|. +|||+|+|+++..+|++|++ ||| ++++|++|||||||||++|||+|||||+|+.
T Consensus 222 l~~~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~ 301 (316)
T 1cs8_A 222 VATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDR 301 (316)
T ss_dssp HHHHCCEEEEECCCSHHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSS
T ss_pred HHhcCCEEEEEecCChhhccccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCC
Confidence 95 59999999997458998876 999 6547899999999999999999999999986
Q ss_pred CCCCCCcccccccceeee
Q 048002 320 DAEEGLCGITLEASYPVK 337 (351)
Q Consensus 320 ~~~~~~Cgi~~~~~yp~~ 337 (351)
+ |.|||+++++||++
T Consensus 302 ~---n~CgI~~~~~~p~~ 316 (316)
T 1cs8_A 302 R---NHCGIASAASYPTV 316 (316)
T ss_dssp S---SGGGTTTSCEEECC
T ss_pred C---CccCccceeeEeeC
Confidence 3 56999999999974
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=5.4e-75 Score=546.69 Aligned_cols=276 Identities=41% Similarity=0.735 Sum_probs=238.3
Q ss_pred HHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHHHccC----CCCeEEEcccCCCCChhhhhhhcCC-ccccCccCCC
Q 048002 34 DLYERWRSHH-TVSRDLKEKQIRFNVFKQNLKRIHKVNQM----DKPYKLRLNRFADMTNHEFMSSRSS-KVSHHRMLHG 107 (351)
Q Consensus 34 ~~f~~~~~~~-k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~----~~s~~~g~N~FsD~t~eEf~~~~~~-~~~~~~~~~~ 107 (351)
.+|++||++| |.|.+.+|+.+| .||++|+++|++||++ +.+|++|+|+|+|||.+||++++++ .........
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~- 80 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILS- 80 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGSC-
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCcccccc-
Confidence 4799999999 999888899999 9999999999999975 4799999999999999999988776 433111000
Q ss_pred CCCccccccCCCCCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCC--CCCCCC
Q 048002 108 PRRQTGFMHGKTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDK--DNHGCD 185 (351)
Q Consensus 108 ~~~~~~~~~~~~~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~--~~~gC~ 185 (351)
... .+..... +||++||||++|+|+||||||.||||||||++++||++++|++++.+.||+|+|+||+. .+.||+
T Consensus 81 -~~~-~~~~~~~-~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC~ 157 (310)
T 2o6x_A 81 -HGV-PYEANNR-AVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCG 157 (310)
T ss_dssp -SSE-ECCC-----CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGGG
T ss_pred -cCC-ccccccC-CCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCCC
Confidence 000 1111122 69999999999999999999999999999999999999999999999999999999986 488999
Q ss_pred CCchHHHHHHHHHcCCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHh
Q 048002 186 GGLMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVA 265 (351)
Q Consensus 186 GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~ 265 (351)
||++..|++|+.+ .||++|++|||.+..+.|.... ....+++.+|..++..++++|+++|.
T Consensus 158 GG~~~~a~~yi~~-~Gi~~e~~yPY~~~~~~C~~~~------------------~~~~~~i~~~~~v~~~~~~~i~~~l~ 218 (310)
T 2o6x_A 158 GGLMENAYQYLKQ-FGLETESSYPYTAVEGQCRYNK------------------QLGVAKVTGFYTVHSGSEVELKNLVG 218 (310)
T ss_dssp CCCHHHHHHHHTT-SCBCBTTTSCCCSSCCCCCCCG------------------GGCCEEEEEEEEECSCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHH-CCcCchhcCCCCCCCCCccCCC------------------CCCceEeCeEEEeCCCCHHHHHHHHH
Confidence 9999999999995 5999999999999888998653 23457899999998778999999995
Q ss_pred -cCCEEEEEecCCCCccCCCC--------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCC
Q 048002 266 -NQPVAVAIDAGGKDFQFYSE--------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEG 324 (351)
Q Consensus 266 -~gPV~v~~~~~~~~f~~Y~~--------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~ 324 (351)
+|||+|+|+++ .+|++|++ |||++ +|++|||||||||++|||+|||||+|+.+ |
T Consensus 219 ~~GPV~v~i~~~-~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n 293 (310)
T 2o6x_A 219 AEGPAAVAVDVE-SDFMMYRSGIYQSQTCSPLRVNHAVLAVGYGTQ-GGTDYWIVKNSWGLSWGERGYIRMVRNRG---N 293 (310)
T ss_dssp HHCCEEEEECCC-HHHHTEEEEEECCSSCCTTCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---S
T ss_pred hcCCeEEEEecc-hhhhhCCCceecCCCCCCCCCCEEEEEEEEecc-CCceEEEEEeCCCCccCCCcEEEEEcCCC---C
Confidence 59999999998 68999876 99987 89999999999999999999999999853 5
Q ss_pred Ccccccccceeeec
Q 048002 325 LCGITLEASYPVKL 338 (351)
Q Consensus 325 ~Cgi~~~~~yp~~~ 338 (351)
.|||+++++||++.
T Consensus 294 ~Cgi~~~~~~p~~~ 307 (310)
T 2o6x_A 294 MCGIASLASLPMVA 307 (310)
T ss_dssp GGGTTTSEEEEEEE
T ss_pred cCCccceeeEEEee
Confidence 69999999999974
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=2.9e-71 Score=520.77 Aligned_cols=270 Identities=27% Similarity=0.510 Sum_probs=230.8
Q ss_pred HHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHHHccCCCCeEEEcccCCCCChhhhhhhcCCccccCccCCCCCCccc
Q 048002 35 LYERWRSHH-TVSRDLKEKQIRFNVFKQNLKRIHKVNQMDKPYKLRLNRFADMTNHEFMSSRSSKVSHHRMLHGPRRQTG 113 (351)
Q Consensus 35 ~f~~~~~~~-k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~~~~~~~~~~~ 113 (351)
+|++||++| |.|.+.+|+.+|+.+|++|+++|++ |+ + |+|+|+|||.+||++++++.......+.. .. .
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~-~-----g~N~F~Dlt~eEf~~~~~~~~~~~~~~~~-~~--~ 76 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG-G-----AINHLSDLSLDEFKNRFLMSAEAFEHLKT-QF--D 76 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC-C-----CCCTTTTSCHHHHHHHHSBCHHHHHHHHH-HH--C
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc-C-----CCCcccCCCHHHHHHHhcCCCCccccccC-Cc--c
Confidence 599999999 9999889999999999999999999 75 2 99999999999999877763321100000 00 0
Q ss_pred ccc-----CCCCCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCC-CCCCCC
Q 048002 114 FMH-----GKTQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDN-HGCDGG 187 (351)
Q Consensus 114 ~~~-----~~~~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~-~gC~GG 187 (351)
+.. ....+||++||||++|+|+||||||.||||||||++++||++++|++++.+.||+|+|+||+ + .||+||
T Consensus 77 ~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~--~~~GC~GG 154 (312)
T 1xkg_A 77 LNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCA--SQHGCHGD 154 (312)
T ss_dssp -----CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHT--CSSTTBCC
T ss_pred cccccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhcc--CCCCCCCC
Confidence 110 01237999999999999999999999999999999999999999999999999999999998 5 899999
Q ss_pred chHHHHHHHHHcCCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHh--
Q 048002 188 LMEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVA-- 265 (351)
Q Consensus 188 ~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~-- 265 (351)
++..|++|+.+. ||++|++|||.+..+.|. .. ....++|++|..++..++++|+++|.
T Consensus 155 ~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~-~~------------------~~~~~~i~~y~~v~~~~~~~ik~al~~~ 214 (312)
T 1xkg_A 155 TIPRGIEYIQHN-GVVQESYYRYVAREQSCR-RP------------------NAQRFGISNYCQIYPPNANKIREALAQT 214 (312)
T ss_dssp CHHHHHHHHHHH-CEEBGGGSCCCSSCCCCC-CC------------------SSCEECCSEEEECCSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHc-CCCccccCCccCCCCCCC-CC------------------CCceEEEeeEEEeCCCCHHHHHHHHHhc
Confidence 999999999995 999999999999888998 43 23567899999998778999999995
Q ss_pred cCCEEEEEecCCC-CccCCCC--------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCC
Q 048002 266 NQPVAVAIDAGGK-DFQFYSE--------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEG 324 (351)
Q Consensus 266 ~gPV~v~~~~~~~-~f~~Y~~--------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~ 324 (351)
+|||+|+|+++.. +|++|++ |||++ +|++|||||||||++|||+|||||+|+. |
T Consensus 215 ~GPV~v~i~~~~~~~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~----n 289 (312)
T 1xkg_A 215 HSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPNYHAVNIVGYSNA-QGVDYWIVRNSWDTNWGDNGYGYFAANI----D 289 (312)
T ss_dssp CCCEEEEEEESCHHHHHTCCSSSCBCCCCSSCCEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----C
T ss_pred CCCEEEEEEecccccccccCCcEEcCCCCCCCcCceEEEEEEEecc-CCceEEEEEeCCCCcccCCcEEEEEcCC----C
Confidence 5999999999832 8998876 78876 7899999999999999999999999983 5
Q ss_pred CcccccccceeeecCCC
Q 048002 325 LCGITLEASYPVKLHPE 341 (351)
Q Consensus 325 ~Cgi~~~~~yp~~~~~~ 341 (351)
.|||++.++||++....
T Consensus 290 ~CgI~~~~~~~~~~~~~ 306 (312)
T 1xkg_A 290 LMMIEEYPYVVILGQTG 306 (312)
T ss_dssp GGGTTTCCEEEECTTCC
T ss_pred cccccceeEEeeccCCC
Confidence 69999999999986543
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=1.7e-65 Score=500.37 Aligned_cols=262 Identities=28% Similarity=0.536 Sum_probs=169.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCeEEE-cccCCCCChhhhhhhcCCccccCccCCCCCCccccccCCCCCCCCceec
Q 048002 50 KEKQIRFNVFKQNLKRIHKVNQMDKPYKLR-LNRFADMTNHEFMSSRSSKVSHHRMLHGPRRQTGFMHGKTQDLPPSVDW 128 (351)
Q Consensus 50 ~E~~~R~~~f~~n~~~I~~~N~~~~s~~~g-~N~FsD~t~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dw 128 (351)
.|+..|+.||++|+++|++||+++.+|+++ +|+|+|||.+||++++++.............. ........+||++|||
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~~~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lP~s~Dw 213 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAIQKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKPAPLT-AEIQQKILFLPTSWDW 213 (441)
T ss_dssp ------------------------------------------------------------------------CCCSCEET
T ss_pred hhHHHHHHHHHHHHHHHHHHHccCCceEeecccccccCCHHHHHHHhCCCcccccccccCccc-cccccccccCCCCEEC
Confidence 567899999999999999999988899998 89999999999999887644311000000000 0111234579999999
Q ss_pred cCCC---CCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCc--cCCHHHhhhcCCCCCCCCCCchHHH-HHHHHHcCCC
Q 048002 129 RKQG---AVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELW--SLSEQELVDCDKDNHGCDGGLMEQA-LNFIAKSEGL 202 (351)
Q Consensus 129 r~~g---~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~--~lS~q~l~dc~~~~~gC~GG~~~~a-~~~~~~~~Gi 202 (351)
|+++ +|+||||||.||||||||++++||++++|+++..+ .||+|+|+||+..+.||+||++..+ ++|+.++ ||
T Consensus 214 R~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~~~~GC~GG~~~~aa~~yi~~~-Gi 292 (441)
T 3pdf_A 214 RNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDF-GL 292 (441)
T ss_dssp TCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCTTSCTTBCCCHHHHTTHHHHHT-CB
T ss_pred CcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhccCCCCCCCCchhHHHHHHHHhc-CC
Confidence 9963 89999999999999999999999999999998765 5999999999988899999999997 8999987 99
Q ss_pred CCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcC----CChHHHHHHHH-hcCCEEEEEecCC
Q 048002 203 TTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVP----ESDENALMKAV-ANQPVAVAIDAGG 277 (351)
Q Consensus 203 ~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~----~~~~~~i~~~l-~~gPV~v~~~~~~ 277 (351)
++|++|||.+..+.|...+ .....++.+|..++ ..++++|+.+| .+|||+|+|+++
T Consensus 293 ~tE~~yPY~~~~~~C~~~~------------------~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~- 353 (441)
T 3pdf_A 293 VEEACFPYTGTDSPCKMKE------------------DCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVY- 353 (441)
T ss_dssp CBGGGSCCCSSCCCSCCCS------------------SCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCC-
T ss_pred CcHHHeeecccCCCCCCcc------------------ccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEec-
Confidence 9999999999989998654 23345677787775 35788999988 679999999997
Q ss_pred CCccCCCC-------------------------ccccC-CCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccc
Q 048002 278 KDFQFYSE-------------------------GYGAT-QDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLE 331 (351)
Q Consensus 278 ~~f~~Y~~-------------------------Gyg~~-~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~ 331 (351)
.+|++|++ |||++ ++|++|||||||||++|||+|||||+|+. |.|||+++
T Consensus 354 ~~F~~Y~sGVy~~~~~~~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~----n~CGI~s~ 429 (441)
T 3pdf_A 354 DDFLHYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGT----DECAIESI 429 (441)
T ss_dssp GGGGGCCSSEECCC---CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTSC
T ss_pred ccccccCCceEecCCCCcccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCC----CccCCCCc
Confidence 79999875 88875 37899999999999999999999999995 45999999
Q ss_pred cceee
Q 048002 332 ASYPV 336 (351)
Q Consensus 332 ~~yp~ 336 (351)
++++.
T Consensus 430 ~~a~~ 434 (441)
T 3pdf_A 430 AVAAT 434 (441)
T ss_dssp CEEEE
T ss_pred eEEee
Confidence 87664
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=1.5e-63 Score=471.11 Aligned_cols=271 Identities=23% Similarity=0.453 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHHHHHHccCC-CCeEEEcc-cCCCCChhhhhhhcCCccccCccCCCCCCcccccc-CCCCCCCCceecc
Q 048002 53 QIRFNVFKQNLKRIHKVNQMD-KPYKLRLN-RFADMTNHEFMSSRSSKVSHHRMLHGPRRQTGFMH-GKTQDLPPSVDWR 129 (351)
Q Consensus 53 ~~R~~~f~~n~~~I~~~N~~~-~s~~~g~N-~FsD~t~eEf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~lP~~~Dwr 129 (351)
+.|...+..|.++|++||+++ .+|++|+| +|+|||.+||++++ +.............. .+.. ....+||++||||
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~~-g~~~~~~~~~~~~~~-~~~~~~~~~~lP~s~DwR 79 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRLN-GVIKKNNNASILPKR-RFTEEEARAPLPSSFDSA 79 (325)
T ss_dssp -------------------------------------------------------CCSCBC-CCCHHHHHCCCCSCEEHH
T ss_pred CcccccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHHh-CCCCCCcccccccCc-cccccccccCCCCcEehh
Confidence 467788888999999999874 89999999 89999999998764 433211100000000 0110 1124799999999
Q ss_pred CC----CCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCC-CccCCHHHhhhcCC-CCCCCCCCchHHHHHHHHHcCCCC
Q 048002 130 KQ----GAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGE-LWSLSEQELVDCDK-DNHGCDGGLMEQALNFIAKSEGLT 203 (351)
Q Consensus 130 ~~----g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~-~~~lS~q~l~dc~~-~~~gC~GG~~~~a~~~~~~~~Gi~ 203 (351)
++ |.|+||||||.||||||||++++||++++|+++. .+.||+|+|+||+. .+.||+||++..|++|+.++ ||+
T Consensus 80 ~~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~~~~A~~yi~~~-Gi~ 158 (325)
T 3hhi_A 80 EAWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSST-GLV 158 (325)
T ss_dssp HHSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBCHHHHHHHHHHT-CBC
T ss_pred HhcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCCHHHHHHHHHHh-CCC
Confidence 98 8999999999999999999999999999999997 89999999999987 57899999999999999998 999
Q ss_pred CCCCCccc-cC----------CCCCCCCCccchhhhhhccccc----CCCCCCCcEEecceEEcCCChHHHHHHHH-hcC
Q 048002 204 TEKSYPYT-AK----------DGSCELPTSMVSIIYRVHICSW----NGDKNAPEVILDGYEMVPESDENALMKAV-ANQ 267 (351)
Q Consensus 204 ~e~~yPY~-~~----------~~~c~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~v~~~~~~~i~~~l-~~g 267 (351)
+|++|||. +. .+.|.... +..+.|.. ..........+.+|. + .++++||++| .+|
T Consensus 159 ~e~~yPY~~~~c~~~~~~~~~~~~C~~~~------~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i~~~i~~~G 229 (325)
T 3hhi_A 159 SDYCQPYPFPHCSHHSKSKNGYPPCSQFN------FDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDYMRELFFRG 229 (325)
T ss_dssp BTTTSCCSSCCCBSSSCCTTCCCBGGGCC------CCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHHHHHHHHHC
T ss_pred cccccCCccccccccccccccCCCCCCcc------cCCcchhhcccccccccceEEeecceE-e--CCHHHHHHHHHHCC
Confidence 99999998 32 24565211 11222221 111122345667786 5 6899999998 679
Q ss_pred CEEEEEecCCCCccCCCC-------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCccc
Q 048002 268 PVAVAIDAGGKDFQFYSE-------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGI 328 (351)
Q Consensus 268 PV~v~~~~~~~~f~~Y~~-------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi 328 (351)
||+|+|+++ .+|++|++ |||++ +|++|||||||||++|||+|||||+|+. |.|||
T Consensus 230 PV~v~i~~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-~g~~YWivkNSWG~~WGe~GY~~i~rg~----n~CGI 303 (325)
T 3hhi_A 230 PFEVAFDVY-EDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTS-NGVPYWKIANSWNTEWGMDGYFLIRRGS----SECGI 303 (325)
T ss_dssp CEEEEEEEE-HHHHTCCSSEECCCSCCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGT
T ss_pred CEEEEEEec-cccccccCceecCCCCCCCCCEEEEEEEEEec-CCceEEEEEeCCCCCcccCCEEEEEcCC----CeecC
Confidence 999999997 79999987 99986 8999999999999999999999999995 46999
Q ss_pred ccccceeeecCCC
Q 048002 329 TLEASYPVKLHPE 341 (351)
Q Consensus 329 ~~~~~yp~~~~~~ 341 (351)
++++++++-.-+.
T Consensus 304 ~~~~~~g~p~~~~ 316 (325)
T 3hhi_A 304 EDGGSAGIPLAPN 316 (325)
T ss_dssp TSCEEEEEEC---
T ss_pred ccceEEeecCCCC
Confidence 9998877754443
No 12
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=3.5e-60 Score=426.39 Aligned_cols=201 Identities=58% Similarity=1.081 Sum_probs=182.2
Q ss_pred CCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHcC
Q 048002 121 DLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSE 200 (351)
Q Consensus 121 ~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~ 200 (351)
+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+..+.||+||++..|++|+.+++
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~~ 81 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTANHGCRGGWMNPAFQFIVNNG 81 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCCCCCCCCCCHHHHHHHHHHhC
Confidence 58999999999999999999999999999999999999999999999999999999997788999999999999999877
Q ss_pred CCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhcCCEEEEEecCCCCc
Q 048002 201 GLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDF 280 (351)
Q Consensus 201 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f 280 (351)
||++|++|||.+..+.|.... ....+++++|..++..++++|+++|++|||+|+|++...+|
T Consensus 82 Gi~~e~~yPY~~~~~~C~~~~------------------~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f 143 (221)
T 1cqd_A 82 GINSEETYPYRGQDGICNSTV------------------NAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDF 143 (221)
T ss_dssp SBCBTTTSCCCSSCCCCCSSS------------------CCCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHH
T ss_pred CccccccCCccCCCCCcCCCC------------------CCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCccc
Confidence 999999999999888897654 23457889999998878999999998899999999975689
Q ss_pred cCCCC------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeeecCC
Q 048002 281 QFYSE------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKLHP 340 (351)
Q Consensus 281 ~~Y~~------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~~~~ 340 (351)
++|++ |||++ +|++|||||||||++|||+|||||+|+.+...|.|||+++++||++..+
T Consensus 144 ~~Y~~Giy~~~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~~~ 220 (221)
T 1cqd_A 144 QLYRSGIFTGSCNISANHALTVVGYGTE-NDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVKKGT 220 (221)
T ss_dssp HTCCSSEECCCCCCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECC--
T ss_pred ccccCccccCCCCCcCCeEEEEEEEccc-CCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEecCC
Confidence 99987 99987 8999999999999999999999999997544578999999999998654
No 13
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=5.7e-60 Score=424.93 Aligned_cols=198 Identities=57% Similarity=1.052 Sum_probs=180.1
Q ss_pred CCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCC--CCCCCCCchHHHHHHHHHc
Q 048002 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKD--NHGCDGGLMEQALNFIAKS 199 (351)
Q Consensus 122 lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~--~~gC~GG~~~~a~~~~~~~ 199 (351)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+.. +.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999984 8899999999999999987
Q ss_pred CCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhcCCEEEEEecCCCC
Q 048002 200 EGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKD 279 (351)
Q Consensus 200 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~ 279 (351)
+|+++|++|||....+.|.... .....+++.+|..++..++++|+++|++|||+|+|++...+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~-----------------~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~ 143 (220)
T 3p5u_A 81 GGINTEANYPYTAEEGQCNLDL-----------------QQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYN 143 (220)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHH-----------------HTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHH
T ss_pred CCcCcccccccccCCCCcCcCC-----------------CCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchh
Confidence 7999999999999888887532 02234678899999888899999999999999999997568
Q ss_pred ccCCCC------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeeec
Q 048002 280 FQFYSE------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKL 338 (351)
Q Consensus 280 f~~Y~~------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~~ 338 (351)
|++|++ |||++ +|++|||||||||++|||+|||||+|+.++ .|.|||+++++||+++
T Consensus 144 f~~Y~~Giy~~~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~-~~~Cgi~~~~~~p~~~ 218 (220)
T 3p5u_A 144 FQHYSSGIFTGPCGTAVDHAVTIVGYGTE-GGIDYWIVKNSWGTTWGEEGYMRIQRNVGG-VGQCGIAKKASYPVKY 218 (220)
T ss_dssp HHTCCSSEECCCCCCSCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCCCT-TCGGGTTSSCEEEECS
T ss_pred hccccCceECCCCCCccceEEEEEEEecC-CCceEEEEECCCCCCcccCCEEEEECCCCC-CCccCcccccceEEEe
Confidence 999987 99986 899999999999999999999999999863 4689999999999864
No 14
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=8.9e-60 Score=422.34 Aligned_cols=198 Identities=51% Similarity=0.974 Sum_probs=180.1
Q ss_pred CCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 048002 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEG 201 (351)
Q Consensus 122 lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~G 201 (351)
||++||||++|+|+||||||.||||||||++++||++++|++++.++||+|+|+||+..+.||+||++..|++|+.++ |
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~yi~~~-G 79 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERRSHGCKGGYPPYALEYVAKN-G 79 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSSSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccCCCCCCCCCCHHHHHHHHHHh-C
Confidence 699999999999999999999999999999999999999999999999999999998778899999999999999998 8
Q ss_pred CCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhcCCEEEEEecCCCCcc
Q 048002 202 LTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQ 281 (351)
Q Consensus 202 i~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~ 281 (351)
|++|++|||....+.|+... .....+++.+|..++..++++|+++|.+|||+|+|+++..+|+
T Consensus 80 i~~e~~yPY~~~~~~C~~~~-----------------~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~ 142 (216)
T 1ppo_A 80 IHLRSKYPYKAKQGTCRAKQ-----------------VGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQ 142 (216)
T ss_dssp BCBTTTSCCCSSCCCCCGGG-----------------CCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHH
T ss_pred cCccccCCccCCCCCcCCCC-----------------CCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhh
Confidence 99999999999888897543 1234567889999987789999999988999999999656899
Q ss_pred CCCC------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeeec
Q 048002 282 FYSE------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKL 338 (351)
Q Consensus 282 ~Y~~------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~~ 338 (351)
+|++ |||++ +|++|||||||||++|||+|||||+|+.++..|.|||+++++||++.
T Consensus 143 ~Y~~Giy~~~~~~~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~~ 216 (216)
T 1ppo_A 143 LYKGGIFEGPCGTKVDHAVTAVGYGKS-GGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTKN 216 (216)
T ss_dssp HCCSSEECCSCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEECC
T ss_pred hcCCceECCCCCCCCCEEEEEEEeecc-CCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEeeC
Confidence 9887 99987 78999999999999999999999999975545789999999999863
No 15
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=1.3e-59 Score=421.79 Aligned_cols=199 Identities=52% Similarity=1.001 Sum_probs=180.9
Q ss_pred CCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 048002 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEG 201 (351)
Q Consensus 122 lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~G 201 (351)
||++||||++|+|+||||||.||||||||++++||++++|++++.++||+|+|+||+..+.||+||++..|++|+.++ |
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~-G 79 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKHSYGCKGGYQTTSLQYVANN-G 79 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHc-C
Confidence 699999999999999999999999999999999999999999999999999999998778899999999999999998 8
Q ss_pred CCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhcCCEEEEEecCCCCcc
Q 048002 202 LTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQ 281 (351)
Q Consensus 202 i~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~ 281 (351)
+++|++|||....+.|...+ .....+++.+|..++..++++|+++|.+|||+|+|+++..+|+
T Consensus 80 i~~e~~yPY~~~~~~C~~~~-----------------~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~ 142 (218)
T 1yal_A 80 VHTSKVYPYQAKQYKCRATD-----------------KPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQ 142 (218)
T ss_dssp BCBTTTSCCCSSCCCCCGGG-----------------CCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHH
T ss_pred CCccccccccCCCCCcccCc-----------------CCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhcc
Confidence 99999999999888887543 1234567899999987789999999988999999999656899
Q ss_pred CCCC------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeeecC
Q 048002 282 FYSE------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKLH 339 (351)
Q Consensus 282 ~Y~~------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~~~ 339 (351)
+|++ |||++ +|++|||||||||++|||+|||||+|+.++..|.|||+++++||++.+
T Consensus 143 ~Y~~Giy~~~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~~ 217 (218)
T 1yal_A 143 LYKSGVFDGPCGTKLDHAVTAVGYGTS-DGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFKGF 217 (218)
T ss_dssp TCCSSEECCSCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEECCC
T ss_pred ccCCceECCCCCCCCCEEEEEEEeecc-CCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEEec
Confidence 9987 99987 789999999999999999999999999754457899999999999754
No 16
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=6e-60 Score=445.63 Aligned_cols=253 Identities=29% Similarity=0.533 Sum_probs=194.8
Q ss_pred HHHHHHHHccCCCCeEEEcccCCCCChhhhhhhcCCccccCccCCCCCCccccccCCCCCCCCceeccCC----CCCCcc
Q 048002 62 NLKRIHKVNQMDKPYKLRLNRFADMTNHEFMSSRSSKVSHHRMLHGPRRQTGFMHGKTQDLPPSVDWRKQ----GAVTGV 137 (351)
Q Consensus 62 n~~~I~~~N~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~~Dwr~~----g~v~pV 137 (351)
+.++|++||+.+.+|++|+| |+|++.||++ .++|........ .. .+......+||++||||++ +.|+||
T Consensus 11 ~~~~i~~~N~~~~~~~~~~n-f~~~~~e~~~-~~lg~~~~~~~~---~~--~~~~~~~~~lP~s~DwR~~~~~c~~vtpV 83 (317)
T 3pbh_A 11 SDELVNYVNKRNTTWQAGHN-FYNVDMSYLK-RLCGTFLGGPKP---PQ--RVMFTEDLKLPASFDAREQWPQCPTIKEI 83 (317)
T ss_dssp CHHHHHHHHHHTCSEEECCC-CSSCCHHHHH-HTCCBCTTCCCC---SE--EECCCSCCCCCSSEEHHHHCTTCGGGTCC
T ss_pred cHHHHHHHHCCCCCeEEeec-cccCCHHHHH-HHcCCCCCcccc---Cc--ccccccccCCCCCEechhccCCCCCcCCc
Confidence 45789999988899999999 9988887765 455654421110 00 1112223579999999987 689999
Q ss_pred CCCCCCchHHHHHHHHHhhhhHHHhhCC--CccCCHHHhhhcCC--CCCCCCCCchHHHHHHHHHcCCCCCCCCC-----
Q 048002 138 KDQGRCGSCWAFSTVVSVEGINKIKTGE--LWSLSEQELVDCDK--DNHGCDGGLMEQALNFIAKSEGLTTEKSY----- 208 (351)
Q Consensus 138 knQg~cGsCwAfA~~~~~e~~~~i~~~~--~~~lS~q~l~dc~~--~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y----- 208 (351)
||||.||||||||++++||++++|+++. .+.||+|+|+||+. .+.||+||++..|++|+.++ ||++|.+|
T Consensus 84 kdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~~~~~ 162 (317)
T 3pbh_A 84 RDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYESHVG 162 (317)
T ss_dssp CBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCSTTCCCB
T ss_pred cccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhccCCCC
Confidence 9999999999999999999999999874 78999999999986 57899999999999999998 99999888
Q ss_pred --cccc---------CCCCCCCCCccchhhhhhcccccCCCC--C----CCcEEecceEEcCCChHHHHHHHH-hcCCEE
Q 048002 209 --PYTA---------KDGSCELPTSMVSIIYRVHICSWNGDK--N----APEVILDGYEMVPESDENALMKAV-ANQPVA 270 (351)
Q Consensus 209 --PY~~---------~~~~c~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~i~~~~~v~~~~~~~i~~~l-~~gPV~ 270 (351)
||.. ..+.|.... ..+.|...... . ...........++ .++++||++| .+|||+
T Consensus 163 c~PY~~~~c~~~~~~~~~~C~~~~-------~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~e~~i~~~i~~~GPV~ 234 (317)
T 3pbh_A 163 CRPYSIPPCEHHVNGSRPPCTGEG-------DTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSEKDIMAEIYKNGPVE 234 (317)
T ss_dssp SSCCCSCCCCCCCTTCCSCCCSCC-------CCCCCCCSCCSSCCSCGGGSEECBCCCEEEC-SCHHHHHHHHHHHCCEE
T ss_pred CcCcccCcccccccCcCCCCCCcC-------CCCcccccccCCCccceeeeeeeeeecccCC-cHHHHHHHHHHHCCCEE
Confidence 9984 345565321 11112111000 0 0111112223454 4789999988 679999
Q ss_pred EEEecCCCCccCCCC-------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccc
Q 048002 271 VAIDAGGKDFQFYSE-------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLE 331 (351)
Q Consensus 271 v~~~~~~~~f~~Y~~-------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~ 331 (351)
|+|+++ .+|++|++ |||++ +|++|||||||||++|||+|||||+|+. |.|||+++
T Consensus 235 v~i~~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~-~g~~YWivkNSWG~~WGe~GY~ri~rg~----n~CgI~~~ 308 (317)
T 3pbh_A 235 GAFSVY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-NGTPYWLVANSWNTDWGDNGFFKILRGQ----DHCGIESE 308 (317)
T ss_dssp EEEEEE-GGGGGEEEEEECCCSCCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTS
T ss_pred EEEEec-ccccCCCCcEEccCCCCCCCCEEEEEEEEEEe-CCeeEEEEEcCCCCCcCCCcEEEEEcCC----CcccCCCc
Confidence 999997 89999987 99987 8999999999999999999999999995 45999998
Q ss_pred cceee
Q 048002 332 ASYPV 336 (351)
Q Consensus 332 ~~yp~ 336 (351)
++.++
T Consensus 309 ~~a~~ 313 (317)
T 3pbh_A 309 VVAGI 313 (317)
T ss_dssp CEECC
T ss_pred eEeee
Confidence 87654
No 17
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=1.5e-59 Score=420.48 Aligned_cols=196 Identities=53% Similarity=1.027 Sum_probs=179.4
Q ss_pred CCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 048002 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEG 201 (351)
Q Consensus 122 lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~G 201 (351)
||++||||++|+|+||||||.||||||||+++++|++++|++++.++||+|+|+||+..+.||+||++..|++|+.+++|
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 80 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTASHGCNGGWMNNAFQYIITNGG 80 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 69999999999999999999999999999999999999999999999999999999976889999999999999998779
Q ss_pred CCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhcCCEEEEEecCCCCcc
Q 048002 202 LTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQ 281 (351)
Q Consensus 202 i~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~ 281 (351)
+++|++|||....+.|.... ...+++.+|..++..++++|+++|.+|||+|+|++...+|+
T Consensus 81 i~~e~~yPY~~~~~~C~~~~-------------------~~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~ 141 (215)
T 1iwd_A 81 IDTQQNYPYSAVQGSCKPYR-------------------LRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQ 141 (215)
T ss_dssp BCBTTTSCCCSSCCCCCTTC-------------------CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHH
T ss_pred cccccccCccCCCCCCCCCC-------------------CceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchh
Confidence 99999999999888897643 24567889999987789999999988999999999834799
Q ss_pred CCCC------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeee
Q 048002 282 FYSE------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVK 337 (351)
Q Consensus 282 ~Y~~------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~ 337 (351)
+|++ |||++ +|++|||||||||++|||+|||||+|+.+...|.|||+++++||++
T Consensus 142 ~Y~~Gvy~~~c~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 214 (215)
T 1iwd_A 142 HYSSGIFTGPCGTAQNHGVVIVGYGTQ-SGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214 (215)
T ss_dssp TCCSSEECCCCCCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred hcCCceECCCCCCcCCEEEEEEEEecc-CCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeee
Confidence 9987 99987 8999999999999999999999999997544478999999999986
No 18
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=6.9e-60 Score=433.43 Aligned_cols=209 Identities=61% Similarity=1.125 Sum_probs=184.3
Q ss_pred CCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCC-CCCCCCCCchHHHHHHHHH
Q 048002 120 QDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDK-DNHGCDGGLMEQALNFIAK 198 (351)
Q Consensus 120 ~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~~gC~GG~~~~a~~~~~~ 198 (351)
.+||++||||++|+|+||||||.||||||||++++||++++|++++.++||+|+|+||+. .+.||+||++..|++|+.+
T Consensus 2 ~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~~yi~~ 81 (262)
T 2fo5_A 2 SDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKN 81 (262)
T ss_dssp -CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHHHHHHH
T ss_pred CCCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHHHHHHH
Confidence 469999999999999999999999999999999999999999999999999999999997 6889999999999999998
Q ss_pred cCCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCC-cEEecceEEcCCChHHHHHHHHhcCCEEEEEecCC
Q 048002 199 SEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAP-EVILDGYEMVPESDENALMKAVANQPVAVAIDAGG 277 (351)
Q Consensus 199 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~ 277 (351)
++|+++|++|||....+.|..... + .... .++|.+|..++..++++|+++|.+|||+|+|+++.
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~-----~----------~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~ 146 (262)
T 2fo5_A 82 NGGLITEAAYPYRAARGTCNVARA-----A----------QNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASG 146 (262)
T ss_dssp TTCEEBTTTSCCCSSCCCCCHHHH-----H----------HHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCS
T ss_pred cCCcCchhcCCCcCccCccCCccc-----c----------cCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecCh
Confidence 779999999999998888875320 0 0123 57788999998778999999998899999999975
Q ss_pred CCccCCCC------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeeecC
Q 048002 278 KDFQFYSE------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKLH 339 (351)
Q Consensus 278 ~~f~~Y~~------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~~~ 339 (351)
.+|++|++ |||++.+|++|||||||||++|||+|||||+|+.++..|.|||+++++||++..
T Consensus 147 ~~f~~Y~sGVy~~~c~~~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~~~ 226 (262)
T 2fo5_A 147 KAFMFYSEGVFTGECGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTY 226 (262)
T ss_dssp HHHHTCCSSEECCCCCCCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEECCC
T ss_pred HHHhccCCceECCCCCCcCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEecC
Confidence 68999987 999875689999999999999999999999999876568899999999999988
Q ss_pred CCCC
Q 048002 340 PENS 343 (351)
Q Consensus 340 ~~~~ 343 (351)
+.+.
T Consensus 227 ~~~~ 230 (262)
T 2fo5_A 227 SKPK 230 (262)
T ss_dssp ----
T ss_pred CCCC
Confidence 7773
No 19
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=1.3e-59 Score=424.73 Aligned_cols=205 Identities=70% Similarity=1.234 Sum_probs=183.9
Q ss_pred CCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCC-CCCCCCCCchHHHHHHHHHc
Q 048002 121 DLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDK-DNHGCDGGLMEQALNFIAKS 199 (351)
Q Consensus 121 ~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~-~~~gC~GG~~~~a~~~~~~~ 199 (351)
+||++||||++|+|+||||||.||||||||++++||++++|++++.++||+|+|+||+. .+.||+||++..|++|+.++
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 80 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQR 80 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999986 58899999999999999987
Q ss_pred CCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhcCCEEEEEecCCCC
Q 048002 200 EGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKD 279 (351)
Q Consensus 200 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~ 279 (351)
+|+++|++|||....+.|.... .....+++.+|..++..++++|+++|.+|||+|+|++...+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~-----------------~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~ 143 (229)
T 1s4v_A 81 GGITTEANYPYEAYDGTCDVSK-----------------ENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSD 143 (229)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHH-----------------HTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHH
T ss_pred CCccccccCCccCCCCCCCCCC-----------------CCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHH
Confidence 7999999999999888887532 02345678899999877899999999889999999995478
Q ss_pred ccCCCC------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeeecCCC
Q 048002 280 FQFYSE------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKLHPE 341 (351)
Q Consensus 280 f~~Y~~------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~~~~~ 341 (351)
|++|++ |||++.+|++|||||||||++|||+|||||+|+.++..|.|||+++++||++..+.
T Consensus 144 f~~Y~~Giy~~~c~~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~~~~ 223 (229)
T 1s4v_A 144 FQFYSEGVFTGSCGTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKKSSN 223 (229)
T ss_dssp HHTCCSSEECCCCCCCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECCSSC
T ss_pred HhhCCCcEECCCCCCCCCeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEecCCC
Confidence 999987 99987448999999999999999999999999976545789999999999988765
Q ss_pred C
Q 048002 342 N 342 (351)
Q Consensus 342 ~ 342 (351)
+
T Consensus 224 ~ 224 (229)
T 1s4v_A 224 N 224 (229)
T ss_dssp C
T ss_pred C
Confidence 4
No 20
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=1.6e-59 Score=422.54 Aligned_cols=198 Identities=46% Similarity=0.916 Sum_probs=175.2
Q ss_pred CCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 048002 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEG 201 (351)
Q Consensus 122 lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~G 201 (351)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+..+.||+||++..|++|+.+++|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~~G 80 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTXXXXXXGGDADDAFRWVITNGG 80 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC------CCCHHHHHHHHHHHTC
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCcccccCCCCHHHHHHHHHHcCC
Confidence 79999999999999999999999999999999999999999999999999999999987899999999999999998779
Q ss_pred CCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhcCCEEEEEecCCCCcc
Q 048002 202 LTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQ 281 (351)
Q Consensus 202 i~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~ 281 (351)
|++|++|||.+..+.|.... .. .+++.+|..++ .++++|+++|++|||+|+|+++..+|+
T Consensus 81 i~~e~~yPY~~~~~~C~~~~------------------~~-~~~i~~~~~v~-~~~~~i~~~l~~GPV~v~i~~~~~~f~ 140 (222)
T 3u8e_A 81 IASDANYPYTGVDGTCDLNK------------------PI-AARIDGYTNVP-NSSSALLDAVAKQPVSVNIYTSSTSFQ 140 (222)
T ss_dssp BCBTTTSCCCSSCCCCCCCS------------------CC-CBCCCEEEECC-SCHHHHHHHHHHSCEEEEECCCSHHHH
T ss_pred ccchhcCCCcccCCccccCC------------------CC-eEEEccEEEeC-CcHHHHHHHHhCCCEEEEEEecChhhh
Confidence 99999999999888998754 12 57788999997 789999999999999999999744788
Q ss_pred CCCC-----------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeeec
Q 048002 282 FYSE-----------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKL 338 (351)
Q Consensus 282 ~Y~~-----------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~~ 338 (351)
+|++ |||++.+|++|||||||||++|||+|||||+|+.++..|.|||+++++||++.
T Consensus 141 ~Y~~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~~ 220 (222)
T 3u8e_A 141 LYTGPGIFAGSSCSDDPATVDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTKS 220 (222)
T ss_dssp TCCCSSCBCCTTCCCCGGGCCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEECC
T ss_pred cEeCCceECCCcccCCCCcCCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEEe
Confidence 8875 88887238999999999999999999999999987666789999999999975
Q ss_pred C
Q 048002 339 H 339 (351)
Q Consensus 339 ~ 339 (351)
+
T Consensus 221 ~ 221 (222)
T 3u8e_A 221 T 221 (222)
T ss_dssp C
T ss_pred C
Confidence 4
No 21
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=2.8e-59 Score=419.10 Aligned_cols=194 Identities=51% Similarity=0.928 Sum_probs=178.0
Q ss_pred CCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 048002 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEG 201 (351)
Q Consensus 122 lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~G 201 (351)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+..+.||+||++..|++|+.+++|
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~G 80 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRG 80 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 79999999999999999999999999999999999999999999999999999999987899999999999999988779
Q ss_pred CCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHh-cCCEEEEEecCCCCc
Q 048002 202 LTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVA-NQPVAVAIDAGGKDF 280 (351)
Q Consensus 202 i~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f 280 (351)
+++|++|||....+.|...+ .....++.+|..++..++++||++|. +|||+|+|++..++|
T Consensus 81 i~~e~~yPY~~~~~~C~~~~------------------~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f 142 (215)
T 3kwz_A 81 IDSEDAYPYVGQEESCMYNP------------------TGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSF 142 (215)
T ss_dssp EEBTTTSCCCSSCCCCCCCG------------------GGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHH
T ss_pred ccccccCCCccCCCccccCC------------------CCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhh
Confidence 99999999999888898654 23456788999998778999999995 589999999975689
Q ss_pred cCCCC--------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeee
Q 048002 281 QFYSE--------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVK 337 (351)
Q Consensus 281 ~~Y~~--------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~ 337 (351)
++|++ |||++ +|++|||||||||++|||+|||||+|+.+ |.|||+++++||++
T Consensus 143 ~~y~~Giy~~~~~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WG~~Gy~~i~r~~~---n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 143 QFYSKGVYYDESCNSDNLNHAVLAVGYGIQ-KGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPKM 215 (215)
T ss_dssp HTCCSSEECCTTCCTTCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTSSCEEECC
T ss_pred hcccCCeECCCCCCCChhhCEEEEEEEecc-CCceEEEEECCcCcccccCCEEEEecCCC---CccCcCCceeeeeC
Confidence 99987 99987 88999999999999999999999999963 56999999999985
No 22
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=7.5e-59 Score=415.56 Aligned_cols=194 Identities=48% Similarity=0.958 Sum_probs=177.2
Q ss_pred CCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 048002 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEG 201 (351)
Q Consensus 122 lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~G 201 (351)
||++||||++|+|+||||||.||||||||+++++|+++++++++.++||+|+|+||+..+.||+||++..|++|+.++ |
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~~~~~-G 79 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCERRSYGCRGGFPLYALQYVANS-G 79 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcCCCCCCCCCCHHHHHHHHHHc-C
Confidence 799999999999999999999999999999999999999999999999999999999888999999999999999998 9
Q ss_pred CCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhcCCEEEEEecCCCCcc
Q 048002 202 LTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQ 281 (351)
Q Consensus 202 i~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~ 281 (351)
+++|++|||.+..+.|.... .....+++.+|..++..+++.|++++++|||+|+|+++.++|+
T Consensus 80 i~~e~~yPY~~~~~~C~~~~-----------------~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~ 142 (213)
T 3ioq_A 80 IHLRQYYPYEGVQRQCRASQ-----------------AKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQ 142 (213)
T ss_dssp EEBGGGSCCCSSCCCCCGGG-----------------CCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHH
T ss_pred CCchhccCcCCCCCCCCCCc-----------------cCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhh
Confidence 99999999999888897533 1345678899999988788889999999999999999756899
Q ss_pred CCCC------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeeec
Q 048002 282 FYSE------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKL 338 (351)
Q Consensus 282 ~Y~~------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~~ 338 (351)
+|++ |||+ +|||||||||++|||+|||||+|+.+...|.|||+++++||++.
T Consensus 143 ~y~~Giy~~~~~~~~~HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~ 212 (213)
T 3ioq_A 143 NYRGGIFAGPCGTSIDHAVAAVGYGN-----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTKN 212 (213)
T ss_dssp TCCSSEECCSCCSCCCEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEECC
T ss_pred hccCCeEcCCCCCccCceEEEEecCC-----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEec
Confidence 9987 7775 69999999999999999999999976445789999999999974
No 23
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=1.5e-58 Score=413.13 Aligned_cols=194 Identities=49% Similarity=0.929 Sum_probs=175.5
Q ss_pred CCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 048002 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEG 201 (351)
Q Consensus 122 lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~G 201 (351)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+..+.||+||++..|++|+.++ |
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~yi~~~-G 79 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDRRSYGCNGGYPWSALQLVAQY-G 79 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHT-C
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCCCCCCCCCCCHHHHHHHHHHh-C
Confidence 699999999999999999999999999999999999999999999999999999999778899999999999999997 8
Q ss_pred CCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhcCCEEEEEecCCCCcc
Q 048002 202 LTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQ 281 (351)
Q Consensus 202 i~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~ 281 (351)
+++|++|||....+.|.... .....+++++|..++..++++|+++|.+|||+|+|+++..+|+
T Consensus 80 i~~e~~yPY~~~~~~C~~~~-----------------~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~ 142 (212)
T 2cio_A 80 IHYRNTYPYEGVQRYCRSRE-----------------KGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQ 142 (212)
T ss_dssp BCBTTTSCCCSSCCCCCTTT-----------------TCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHH
T ss_pred cCcccccCCcCCCCCcCCCC-----------------CCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchh
Confidence 99999999999888897653 1234567889999987789999999988999999999744899
Q ss_pred CCCC------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeeec
Q 048002 282 FYSE------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKL 338 (351)
Q Consensus 282 ~Y~~------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~~ 338 (351)
+|++ |||+ +|||||||||++|||+|||||+|+.+...|.|||+++++||++.
T Consensus 143 ~Y~~Gvy~~~~~~~~~HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 212 (212)
T 2cio_A 143 LYRGGIFVGPCGNKVDHAVAAVGYGP-----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVKN 212 (212)
T ss_dssp TCCSSEECCCCCSCCCEEEEEEEEET-----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEECC
T ss_pred hcCCceecCCCCCCCCEEEEEEEecC-----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEeC
Confidence 9987 6665 69999999999999999999999975445789999999999863
No 24
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=1.1e-58 Score=422.65 Aligned_cols=202 Identities=46% Similarity=0.869 Sum_probs=179.3
Q ss_pred CCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHcC
Q 048002 121 DLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSE 200 (351)
Q Consensus 121 ~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~ 200 (351)
+||++||||++|+|+||||||.||||||||++++||++++|++++.++||+|+|+||+..+.||+||++..|++|+.+++
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~~~~gC~GG~~~~a~~y~~~~~ 80 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVDESEGCYNGWHYQSFEWVVKHG 80 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSBTTTBCCHHHHHHHHHHTT
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcCCCCCCCCCCHHHHHHHHHHhC
Confidence 48999999999999999999999999999999999999999999999999999999987788999999999999999877
Q ss_pred CCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecce---EEcCCChHHHHHHHHhc----CCEEEEE
Q 048002 201 GLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGY---EMVPESDENALMKAVAN----QPVAVAI 273 (351)
Q Consensus 201 Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~v~~~~~~~i~~~l~~----gPV~v~~ 273 (351)
|+++|++|||....+.|.... ....+++++| ..++..++++|+++|.+ |||+|+|
T Consensus 81 Gi~~e~~yPY~~~~~~C~~~~------------------~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i 142 (246)
T 2b1m_A 81 GIASEADYPYKARDGKCKANE------------------IQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSI 142 (246)
T ss_dssp CBCBTTTSCCCSSCCCCCGGG------------------CCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEE
T ss_pred CcCccccccccCCCCcCcCCC------------------CCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEE
Confidence 999999999999888897543 2345678888 78877789999999966 9999999
Q ss_pred ecCCCCccCCCC---------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCccccccc
Q 048002 274 DAGGKDFQFYSE---------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEA 332 (351)
Q Consensus 274 ~~~~~~f~~Y~~---------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~ 332 (351)
++ .+|++|++ |||++ +|++|||||||||++|||+|||||+|+.++..|.|||++++
T Consensus 143 ~~--~~f~~Y~~Giy~~~~c~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~ 219 (246)
T 2b1m_A 143 DA--KDFHFYSGGIYDGGNCSSPYGINHFVLIVGYGSE-DGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFA 219 (246)
T ss_dssp CC--TTGGGCCSSEECCTTCCSSCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEE
T ss_pred Ec--chhhcccceeecCCCCCCCCcCceEEEEEEEecc-CCceEEEEEeCCCCcccCCcEEEEEcCCCCCCcccccccee
Confidence 99 58999876 89987 89999999999999999999999999975445789999999
Q ss_pred ceeeecCCCCC
Q 048002 333 SYPVKLHPENS 343 (351)
Q Consensus 333 ~yp~~~~~~~~ 343 (351)
+||++..+.+.
T Consensus 220 ~~p~~~~~~~~ 230 (246)
T 2b1m_A 220 SYPIIEKSETL 230 (246)
T ss_dssp EEEECCC----
T ss_pred eEEEecCCCCC
Confidence 99998776544
No 25
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=2.3e-58 Score=412.53 Aligned_cols=195 Identities=52% Similarity=1.034 Sum_probs=176.7
Q ss_pred CCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 048002 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEG 201 (351)
Q Consensus 122 lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~G 201 (351)
||++||||++|+|+||||||.||||||||++++||++++|++++.++||+|+|+||+..+.||+||++..|++|+.++ |
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~-G 79 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCERRSHGCDGGYQTTSLQYVVDN-G 79 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHH-C
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcCCCCCCCCCCHHHHHHHHHHh-C
Confidence 699999999999999999999999999999999999999999999999999999999768899999999999999998 9
Q ss_pred CCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhcCCEEEEEecCCCCcc
Q 048002 202 LTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQ 281 (351)
Q Consensus 202 i~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~ 281 (351)
+++|++|||....+.|.... .....+++++|..++..++++|+++|.+|||+|+|++..++|+
T Consensus 80 i~~e~~yPY~~~~~~C~~~~-----------------~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~ 142 (214)
T 2bdz_A 80 VHTEREYPYEKKQGRCRAKD-----------------KKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQ 142 (214)
T ss_dssp EEBTTTSCCCSSCCCCCTTT-----------------CCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHH
T ss_pred CCccccCCCCCCCCCCCCCC-----------------CCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhh
Confidence 99999999999888897654 1234678899999988889999999988999999999756899
Q ss_pred CCCC------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeeecC
Q 048002 282 FYSE------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKLH 339 (351)
Q Consensus 282 ~Y~~------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~~~ 339 (351)
+|++ |||+ +|||||||||++|||+|||||+|+.++..|.|||+++++||++.+
T Consensus 143 ~Y~~Giy~~~~~~~~~HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~~ 213 (214)
T 2bdz_A 143 FYKGGIYEGPCGTNTDHAVTAVGYGK-----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIKGY 213 (214)
T ss_dssp TCCSSEECCSCCSCCCEEEEEEEECS-----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEECC-
T ss_pred cccCceecCCCCCCCCeEEEEEEcCC-----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEecC
Confidence 9987 7765 699999999999999999999999754457899999999999753
No 26
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=2.3e-58 Score=419.69 Aligned_cols=199 Identities=35% Similarity=0.713 Sum_probs=179.9
Q ss_pred CCCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHH
Q 048002 119 TQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAK 198 (351)
Q Consensus 119 ~~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~ 198 (351)
..+||++||||++|+|+||||||.||||||||++++||++++|+++..++||+|+|++|+..+.||+||++..|++|+.+
T Consensus 15 ~~~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~~~~gC~GG~~~~a~~yi~~ 94 (241)
T 2oul_A 15 ENFDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSFKNYGCNGGLINNAFEDMIE 94 (241)
T ss_dssp CCCCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCTTSCTTBCBCHHHHHHHHHH
T ss_pred cccCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999977889999999999999998
Q ss_pred cCCCCCCCCCccccCCCC-CCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhcCCEEEEEecCC
Q 048002 199 SEGLTTEKSYPYTAKDGS-CELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGG 277 (351)
Q Consensus 199 ~~Gi~~e~~yPY~~~~~~-c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~ 277 (351)
+.|+++|++|||....+. |+... ....+++.+|..++..++++||++| |||+|+|++.
T Consensus 95 ~~Gi~~e~~yPY~~~~~~~C~~~~------------------~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~- 153 (241)
T 2oul_A 95 LGGICPDGDYPYVSDAPNLCNIDR------------------CTEKYGIKNYLSVPDNKLKEALRFL--GPISISVAVS- 153 (241)
T ss_dssp TTSBCBTTSSCCCTTSCCCCCTTS------------------SSCCBCCSEEEECCTTCHHHHHHHT--CCEEEEECBC-
T ss_pred hCCcCccccCCCcCCCCCcCCCCC------------------CccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-
Confidence 559999999999998877 87643 2345678999999877899999999 9999999997
Q ss_pred CCccCCCC------------------ccccCC---------CCccEEEEEcCCCCCccCCceEEEEecCCCCCCCccccc
Q 048002 278 KDFQFYSE------------------GYGATQ---------DGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITL 330 (351)
Q Consensus 278 ~~f~~Y~~------------------Gyg~~~---------~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~ 330 (351)
.+|++|++ |||++. .|++|||||||||++|||+|||||+|+.++..|.|||++
T Consensus 154 ~~f~~Y~~Giy~~~c~~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~ 233 (241)
T 2oul_A 154 DDFAFYKEGIFDGECGDQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGT 233 (241)
T ss_dssp HHHHTCCSSBCCSCBCSSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTS
T ss_pred cchhhcCCcEEcCcCCCCCCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccc
Confidence 78999976 999862 278999999999999999999999999876567799999
Q ss_pred ccceeeec
Q 048002 331 EASYPVKL 338 (351)
Q Consensus 331 ~~~yp~~~ 338 (351)
+++||+++
T Consensus 234 ~~~~~~~~ 241 (241)
T 2oul_A 234 DAFIPLIE 241 (241)
T ss_dssp SEEEEECC
T ss_pred eEEEEeeC
Confidence 99999863
No 27
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=1.1e-58 Score=416.22 Aligned_cols=194 Identities=47% Similarity=0.896 Sum_probs=176.5
Q ss_pred CCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcC-C--CCCCCCCCchHHHHHHHHH
Q 048002 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCD-K--DNHGCDGGLMEQALNFIAK 198 (351)
Q Consensus 122 lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~-~--~~~gC~GG~~~~a~~~~~~ 198 (351)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+ . .+.||+||++..|++|+.+
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999999 3 5889999999999999987
Q ss_pred cCCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHh-cCCEEEEEecCC
Q 048002 199 SEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVA-NQPVAVAIDAGG 277 (351)
Q Consensus 199 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~-~gPV~v~~~~~~ 277 (351)
+.|+++|++|||....+.|.... .....++.+|..++..++++||++|. +|||+++|++..
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~------------------~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~ 143 (218)
T 3ovx_A 82 NKGIDSDASYPYKAMDQKCQYDS------------------KYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARH 143 (218)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCG------------------GGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCS
T ss_pred hCCcCcccccCccCCCCcccCCC------------------ccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecc
Confidence 56999999999999888998654 23456788899998778999999995 589999999975
Q ss_pred CCccCCCC-------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeee
Q 048002 278 KDFQFYSE-------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVK 337 (351)
Q Consensus 278 ~~f~~Y~~-------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~ 337 (351)
++|++|++ |||++ +|++|||||||||++|||+|||||+|+.+ |.|||+++++||++
T Consensus 144 ~~f~~y~~Giy~~~~~~~~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WG~~Gy~~i~~~~~---n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 144 PSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDL-NGKEYWLVKNSWGHNFGEEGYIRMARNKG---NHCGIASFPSYPEI 218 (218)
T ss_dssp HHHHHCCSSEECCTTCCSCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred hhhhcccCceecCCCCCcccCcEEEEEEEecc-CCceEEEEECCCCCccccCCEEEEecCCC---CcccccCceeeeeC
Confidence 58998887 99987 79999999999999999999999999862 56999999999985
No 28
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=2.5e-58 Score=419.98 Aligned_cols=199 Identities=38% Similarity=0.721 Sum_probs=179.1
Q ss_pred CCCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHH
Q 048002 119 TQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAK 198 (351)
Q Consensus 119 ~~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~ 198 (351)
..+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+..+.||+||++..|++|+.+
T Consensus 17 ~~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~~~gC~GG~~~~a~~y~~~ 96 (243)
T 3bwk_A 17 AKLDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVKNNGCYGGYITNAFDDMID 96 (243)
T ss_dssp CCCCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTTSCGGGCCCHHHHHHHHHH
T ss_pred cccCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999999999976889999999999999998
Q ss_pred cCCCCCCCCCccccCCCC-CCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhcCCEEEEEecCC
Q 048002 199 SEGLTTEKSYPYTAKDGS-CELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGG 277 (351)
Q Consensus 199 ~~Gi~~e~~yPY~~~~~~-c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~ 277 (351)
+.|+++|++|||....+. |+... ....+++.+|..++..++++||++| |||+|+|++.
T Consensus 97 ~~Gi~~e~~yPY~~~~~~~C~~~~------------------~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~- 155 (243)
T 3bwk_A 97 LGGLCSQDDYPYVSNLPETCNLKR------------------CNERYTIKSYVSIPDDKFKEALRYL--GPISISIAAS- 155 (243)
T ss_dssp TTSBCBTTTSCCCTTSCCCCCGGG------------------CSSCBCCCEEEECCTTCHHHHHHHT--CCEEEEECCC-
T ss_pred hCCcccccccCCcCCCCCcCCCCC------------------CccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-
Confidence 559999999999988777 87543 2345678899999877899999999 9999999997
Q ss_pred CCccCCCC------------------ccccCC---------CCccEEEEEcCCCCCccCCceEEEEecCCCCCCCccccc
Q 048002 278 KDFQFYSE------------------GYGATQ---------DGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITL 330 (351)
Q Consensus 278 ~~f~~Y~~------------------Gyg~~~---------~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~ 330 (351)
.+|++|++ |||++. .|++|||||||||++|||+|||||+|+.++..|.|||++
T Consensus 156 ~~f~~Y~~Giy~~~c~~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~ 235 (243)
T 3bwk_A 156 DDFAFYRGGFYDGECGAAPNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGT 235 (243)
T ss_dssp HHHHTCCSSSCCCCCCSSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTS
T ss_pred hhHHhcCCceecCCCCCcCCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccc
Confidence 78999876 999862 278999999999999999999999999876567799999
Q ss_pred ccceeeec
Q 048002 331 EASYPVKL 338 (351)
Q Consensus 331 ~~~yp~~~ 338 (351)
+++||+++
T Consensus 236 ~~~~~~~~ 243 (243)
T 3bwk_A 236 EAYVPLLE 243 (243)
T ss_dssp SEEEEEC-
T ss_pred eEEEEecC
Confidence 99999863
No 29
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=9.6e-58 Score=406.73 Aligned_cols=189 Identities=59% Similarity=1.024 Sum_probs=171.9
Q ss_pred CCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 048002 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEG 201 (351)
Q Consensus 122 lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~G 201 (351)
||++||||++|+|+||||||.||||||||++++||++++|++++.++||+|+|+||+..+.||+||++..|++|+.+++|
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~~G 80 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKKNHGCLGGAFVFAYQYIINNGG 80 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcCCCCCCCCCCHHHHHHHHHHhCC
Confidence 69999999999999999999999999999999999999999999999999999999977889999999999999998779
Q ss_pred CCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhcCCEEEEEecCCCCcc
Q 048002 202 LTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGGKDFQ 281 (351)
Q Consensus 202 i~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~~~f~ 281 (351)
+++|++|||.+..+.|+. . ...+++.+|..++..++++|+++|.+|||+|+|++...+|+
T Consensus 81 i~~e~~yPY~~~~~~C~~-~-------------------~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~ 140 (208)
T 1o0e_A 81 IDTQANYPYKAVQGPCQA-A-------------------SKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQ 140 (208)
T ss_dssp BCBTTTSCCCSSCCCCCC-C-------------------CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHH
T ss_pred cCcccccCccCCCCcCCC-C-------------------CceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccc
Confidence 999999999998888875 2 23457888999987789999999988999999999744899
Q ss_pred CCCC------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeee
Q 048002 282 FYSE------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVK 337 (351)
Q Consensus 282 ~Y~~------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~ 337 (351)
+|++ |||+ +|||||||||++|||+|||||+|+.+ .|.|||+++++||++
T Consensus 141 ~Y~~Gvy~~~c~~~~~HaV~iVGyg~-----~yWivkNSWG~~WGe~Gy~~i~~~~~--~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 141 QYSSGIFSGPCGTKLNHGVTIVGYQA-----NYWIVRNSWGRYWGEKGYIRMLRVGG--CGLCGIARLPYYPTK 207 (208)
T ss_dssp TCCSSEECCCCCSCCCEEEEEEEECS-----SEEEEECSBCTTSTBTTEEEEECCST--TCGGGTTSSCEEEEC
T ss_pred cccCceECCCCCCcCCEEEEEEEeCC-----CeEEEEcCCCCcccCCcEEEEEcCCC--CCcCCCcccceeeec
Confidence 9987 7765 69999999999999999999999863 257999999999986
No 30
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=5.3e-58 Score=410.36 Aligned_cols=191 Identities=46% Similarity=0.814 Sum_probs=171.8
Q ss_pred CCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHcCC
Q 048002 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEG 201 (351)
Q Consensus 122 lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~G 201 (351)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+..+.||+||++..|++|+.+++|
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~~i~~~~G 80 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDKMDKACMGGLPSNAYSAIKNLGG 80 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCSSSCTTBCCCHHHHHHHHHHHTC
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcC
Confidence 69999999999999999999999999999999999999999999999999999999977889999999999999998769
Q ss_pred CCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHH-hcCCEEEEEecCCCCc
Q 048002 202 LTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAV-ANQPVAVAIDAGGKDF 280 (351)
Q Consensus 202 i~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l-~~gPV~v~~~~~~~~f 280 (351)
+++|++|||.+..+.|.... ....+++.++..++. ++++||++| .+|||+|+|++. +|
T Consensus 81 i~~e~~yPY~~~~~~C~~~~------------------~~~~~~i~~~~~i~~-~~~~ik~~l~~~GPV~v~i~~~--~f 139 (214)
T 1m6d_A 81 LETEDDYSYQGHMQSCQFSA------------------EKAKVYIQDSVELSQ-NEQKLAAWLAKRGPISVAINAF--GM 139 (214)
T ss_dssp BCBTTTSCCCSSCCCCCCCG------------------GGCCBCCSEEEECCS-CHHHHHHHHHHHCCEEEEECTH--HH
T ss_pred cccccCcCcCCCCCcCCCCc------------------ccceEEecCEEEeCh-HHHHHHHHHHhCCCEEEEEEec--hh
Confidence 99999999999888898654 123456778888865 788999998 579999999986 48
Q ss_pred cCCCC----------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeeec
Q 048002 281 QFYSE----------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVKL 338 (351)
Q Consensus 281 ~~Y~~----------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~~ 338 (351)
++|++ |||++ +|++|||||||||++|||+|||||+|+. |.|||+++++||+++
T Consensus 140 ~~Y~~Giy~~~~~~c~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~Cgi~~~~~~~~~~ 214 (214)
T 1m6d_A 140 QFYRHGISRPLRPLCSPWLIDHAVLLVGYGQR-SDVPFWAIKNSWGTDWGEKGYYYLHRGS----GACGVNTMASSAVVD 214 (214)
T ss_dssp HHCCSSEECCCGGGSCTTCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEESSS----CGGGTTTTCEEEECC
T ss_pred hhcCCceecCCCCcCCCCcCCEEEEEEEEeec-CCcEEEEEEeCCCCCcccCcEEEEEcCC----CccccCceeEEEEeC
Confidence 77765 99986 8899999999999999999999999984 569999999999864
No 31
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=9e-58 Score=410.62 Aligned_cols=194 Identities=51% Similarity=0.946 Sum_probs=173.4
Q ss_pred CCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCC--CCCCCCCCchHHHHHHHHHc
Q 048002 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDK--DNHGCDGGLMEQALNFIAKS 199 (351)
Q Consensus 122 lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~--~~~gC~GG~~~~a~~~~~~~ 199 (351)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 7999999999999999999999999999999999999999999999999999999986 37899999999999999744
Q ss_pred CCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHh-cCCEEEEEecCCC
Q 048002 200 EGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVA-NQPVAVAIDAGGK 278 (351)
Q Consensus 200 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~ 278 (351)
.|+++|++|||....+.|...+ ....+++++|..++. ++++||++|. +|||+|+|++...
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~------------------~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~ 141 (220)
T 2xu3_A 81 GGLDSEESYPYEATEESCKYNP------------------KYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHE 141 (220)
T ss_dssp TCEEBTTTSCCCSSCCCCCCCG------------------GGEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSH
T ss_pred CCcccccccCCcccCcCccCCC------------------CCcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCc
Confidence 5999999999999888897653 234567889999976 8999999995 5999999999745
Q ss_pred CccCCCC--------------------cccc---CCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCccccccccee
Q 048002 279 DFQFYSE--------------------GYGA---TQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYP 335 (351)
Q Consensus 279 ~f~~Y~~--------------------Gyg~---~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp 335 (351)
+|++|++ |||+ +++|++|||||||||++|||+|||||+|+.+ |.|||+++++||
T Consensus 142 ~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~---n~Cgi~~~~~~p 218 (220)
T 2xu3_A 142 SFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYP 218 (220)
T ss_dssp HHHTCCSSEECCTTCCSSCCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEE
T ss_pred ccccccceEEcCCCCCCCCCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCC---CcCCccccceee
Confidence 8999876 9993 2378999999999999999999999999863 469999999999
Q ss_pred ee
Q 048002 336 VK 337 (351)
Q Consensus 336 ~~ 337 (351)
++
T Consensus 219 ~~ 220 (220)
T 2xu3_A 219 TV 220 (220)
T ss_dssp EC
T ss_pred eC
Confidence 84
No 32
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=5.1e-58 Score=412.86 Aligned_cols=192 Identities=33% Similarity=0.630 Sum_probs=175.9
Q ss_pred CCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHc
Q 048002 120 QDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKS 199 (351)
Q Consensus 120 ~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~ 199 (351)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||+. +.||+||++..|++|++++
T Consensus 8 ~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~-~~gC~GG~~~~a~~~~~~~ 86 (222)
T 3f5v_A 8 GNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS-QHGCHGDTIPRGIEYIQHN 86 (222)
T ss_dssp CCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC-SSTTBCCCHHHHHHHHHHH
T ss_pred cCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC-CCCCCCCCHHHHHHHHHHc
Confidence 479999999999999999999999999999999999999999999999999999999997 8999999999999999997
Q ss_pred CCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhc--CCEEEEEecC-
Q 048002 200 EGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVAN--QPVAVAIDAG- 276 (351)
Q Consensus 200 ~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~--gPV~v~~~~~- 276 (351)
|+++|++|||.+..+.|.. + ....+++.+|..++..++++||++|.+ |||+|+|++.
T Consensus 87 -Gi~~e~~yPY~~~~~~C~~-~------------------~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~ 146 (222)
T 3f5v_A 87 -GVVQESYYRYVAREQSCRR-P------------------NAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKD 146 (222)
T ss_dssp -CEEBGGGSCCCSSCCCCCC-C------------------SSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESC
T ss_pred -CCCchhhCCCcccCCCccC-C------------------cCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEecc
Confidence 9999999999998888983 2 345678999999987889999999964 8999999984
Q ss_pred CCCccCCCC--------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceee
Q 048002 277 GKDFQFYSE--------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPV 336 (351)
Q Consensus 277 ~~~f~~Y~~--------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~ 336 (351)
..+|++|++ |||++ +|++|||||||||++|||+|||||+|+. |.|||+++++||+
T Consensus 147 ~~~f~~Y~~gi~~~~~~~~~~~~HaV~iVGyg~~-~g~~ywivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~p~ 221 (222)
T 3f5v_A 147 LDAFRHYDGRTIIQRDNGYQPNYHAVNIVGYSNA-QGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVI 221 (222)
T ss_dssp HHHHHTCCSSSCBCCCCSSSCEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEE
T ss_pred chhhhccCCCceecCCCCCCccCcEEEEEEEecc-CCCEEEEEEcCCCCCcccCCEEEEEcCC----CeecCCCceeEEe
Confidence 257999885 99987 8999999999999999999999999994 5699999999998
Q ss_pred e
Q 048002 337 K 337 (351)
Q Consensus 337 ~ 337 (351)
+
T Consensus 222 ~ 222 (222)
T 3f5v_A 222 L 222 (222)
T ss_dssp C
T ss_pred C
Confidence 5
No 33
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=2.8e-58 Score=415.12 Aligned_cols=199 Identities=47% Similarity=0.912 Sum_probs=179.1
Q ss_pred CCCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCC--CCCCCCCchHHHHHHHH
Q 048002 120 QDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKD--NHGCDGGLMEQALNFIA 197 (351)
Q Consensus 120 ~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~--~~gC~GG~~~~a~~~~~ 197 (351)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|++|+.. +.||+||++..|++|+.
T Consensus 5 ~~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~ 84 (224)
T 3f75_A 5 SELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVL 84 (224)
T ss_dssp GGSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHH
T ss_pred cCCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHH
Confidence 4699999999999999999999999999999999999999999999999999999999873 88999999999999999
Q ss_pred HcCCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhcCCEEEEEecCC
Q 048002 198 KSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQPVAVAIDAGG 277 (351)
Q Consensus 198 ~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~gPV~v~~~~~~ 277 (351)
++.||++|++|||....+.|.... .....++.+|..++..++++|+++|.+|||+|+|++..
T Consensus 85 ~~~Gi~~e~~yPY~~~~~~C~~~~------------------~~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~ 146 (224)
T 3f75_A 85 DSGGICSEDAYPYLARDEECRAQS------------------CEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQ 146 (224)
T ss_dssp HHTCBCBTTTSCCCSSCCCCCGGG------------------SCCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCS
T ss_pred HhCCccccccCCCcCCCCCCCcCC------------------CCceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccc
Confidence 845999999999999888897644 23345688999998888999999999999999999974
Q ss_pred CCccCCCC------------------ccccCC-CCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeee
Q 048002 278 KDFQFYSE------------------GYGATQ-DGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVK 337 (351)
Q Consensus 278 ~~f~~Y~~------------------Gyg~~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~ 337 (351)
.+|++|++ |||++. +|++|||||||||++|||+|||||+|+... .|.|||+++++||++
T Consensus 147 ~~f~~y~~Giy~~~~~~~~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~-~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 147 MPFQFYHEGVFDASCGTDLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKGE-EGQCGLLLDASFPVM 224 (224)
T ss_dssp HHHHTEEEEEECCCCCCCCCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSCT-TCGGGTTSSCEEEEC
T ss_pred hhhhcCccceECCCCCCccCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCCC-CCcCcccCceeeeeC
Confidence 48999886 999864 689999999999999999999999999632 367999999999985
No 34
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=1.5e-57 Score=407.75 Aligned_cols=190 Identities=45% Similarity=0.833 Sum_probs=170.4
Q ss_pred CCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHc--
Q 048002 122 LPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKS-- 199 (351)
Q Consensus 122 lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~-- 199 (351)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+..+.||+||++..|++|+.++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~~~~gC~GG~~~~a~~y~~~~~~ 80 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDKTDSGCSGGLMNNAFEWIVQENN 80 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCSSSCGGGCCCHHHHHHHHHHHST
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCCCCCCCCCCCHHHHHHHHHHhcc
Confidence 699999999999999999999999999999999999999999999999999999999888999999999999999985
Q ss_pred CCCCCCCCCccccCCC---CCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHH-hcCCEEEEEec
Q 048002 200 EGLTTEKSYPYTAKDG---SCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAV-ANQPVAVAIDA 275 (351)
Q Consensus 200 ~Gi~~e~~yPY~~~~~---~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l-~~gPV~v~~~~ 275 (351)
+|+++|++|||....+ .|.... ....+++.+|..++. ++++||++| .+|||+|+|++
T Consensus 81 gGi~~e~~yPY~~~~~~~~~C~~~~------------------~~~~~~i~~~~~v~~-~~~~ik~~l~~~gPV~v~~~~ 141 (215)
T 3i06_A 81 GAVYTEDSYPYASGEGISPPCTTSG------------------HTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA 141 (215)
T ss_dssp TEEEC-CCSCCCCTTSCCCCCCCSS------------------CCEEEEEEEEEECCS-CHHHHHHHHHHHCCEEEEECC
T ss_pred ccccccCccCCcCCCCCCCccccCC------------------cccceEecceEEeCC-hHHHHHHHHHHCCCEEEEEEc
Confidence 5799999999987543 565543 234578899999975 789999999 57999999998
Q ss_pred CCCCccCCCC------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCcccccccceeee
Q 048002 276 GGKDFQFYSE------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYPVK 337 (351)
Q Consensus 276 ~~~~f~~Y~~------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~ 337 (351)
. +|++|++ |||++ +|++|||||||||++|||+|||||+|+. |.|||+++++||++
T Consensus 142 ~--~f~~Y~~Giy~~~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~rg~----n~cgi~~~~~~~~~ 214 (215)
T 3i06_A 142 S--SWMTYTGGVMTSCVSEQLDHGVLLVGYNDS-AAVPYWIIKNSWTTQWGEEGYIRIAKGS----NQCLVKEEASSAVV 214 (215)
T ss_dssp T--TGGGCCSSEECSCCCSCCCEEEEEEEEESS-SSSCEEEEECSBCTTSTBTTEEEEESSS----CGGGTTSSEEEEEE
T ss_pred h--HHhcCCCCcccCCCCCccCcEEEEEEEecc-CCcEEEEEECCCCCCcccCceEEEecCC----CeecCCCceeEEec
Confidence 4 8999987 99987 8899999999999999999999999985 46999999999986
No 35
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=9.7e-58 Score=410.52 Aligned_cols=192 Identities=44% Similarity=0.929 Sum_probs=175.9
Q ss_pred CCCceeccCCC-CCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCC--CCCCCCCCchHHHHHHHHH
Q 048002 122 LPPSVDWRKQG-AVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDK--DNHGCDGGLMEQALNFIAK 198 (351)
Q Consensus 122 lP~~~Dwr~~g-~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~--~~~gC~GG~~~~a~~~~~~ 198 (351)
||++||||++| +|+||||||.||||||||++++||+++++++++.++||+|+|+||+. .+.||+||++..|++|+.+
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 79999999998 89999999999999999999999999999999999999999999986 4789999999999999998
Q ss_pred cCCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHH-hcCCEEEEEecCC
Q 048002 199 SEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAV-ANQPVAVAIDAGG 277 (351)
Q Consensus 199 ~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l-~~gPV~v~~~~~~ 277 (351)
++|+++|++|||....+.|...+ .....++.+|..++..++++||++| .+|||+++|++.
T Consensus 81 ~~Gi~~e~~yPY~~~~~~C~~~~------------------~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~- 141 (220)
T 8pch_A 81 NKGIMGEDTYPYKGQDDHCKFQP------------------DKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVT- 141 (220)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCG------------------GGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCC-
T ss_pred cCCcCcccccCccCCCCCCCCCC------------------CcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEec-
Confidence 77999999999999888898654 2345678899999878899999999 468999999998
Q ss_pred CCccCCCC----------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCCCCCCCccccccccee
Q 048002 278 KDFQFYSE----------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGIDAEEGLCGITLEASYP 335 (351)
Q Consensus 278 ~~f~~Y~~----------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~yp 335 (351)
.+|++|++ |||++ +|++|||||||||++|||+|||||+|+. |.|||+++++||
T Consensus 142 ~~f~~Y~~Giy~~~~~~~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~~ 216 (220)
T 8pch_A 142 NDFLMYRKGIYSSTSCHKTPDKVNHAVLAVGYGEE-NGIPYWIVKNSWGPQWGMNGYFLIERGK----NMCGLAACASYP 216 (220)
T ss_dssp HHHHTCCSSEECCSSCCCSTTTCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEE
T ss_pred cchhhcCCCcccCCcCCCCCCcCCcEEEEEEEEcc-CCeeEEEEECCCCcCcccCCEEEEEcCC----CccccCCCceeE
Confidence 68999876 99987 7899999999999999999999999985 569999999999
Q ss_pred ee
Q 048002 336 VK 337 (351)
Q Consensus 336 ~~ 337 (351)
+.
T Consensus 217 ~p 218 (220)
T 8pch_A 217 IP 218 (220)
T ss_dssp EE
T ss_pred ee
Confidence 85
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=6.8e-53 Score=389.14 Aligned_cols=205 Identities=32% Similarity=0.608 Sum_probs=165.4
Q ss_pred CCCCCceeccCC----CCCCccCCCCCCchHHHHHHHHHhhhhHHHhhC--CCccCCHHHhhhcCC--CCCCCCCCchHH
Q 048002 120 QDLPPSVDWRKQ----GAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTG--ELWSLSEQELVDCDK--DNHGCDGGLMEQ 191 (351)
Q Consensus 120 ~~lP~~~Dwr~~----g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~--~~~~lS~q~l~dc~~--~~~gC~GG~~~~ 191 (351)
.+||++||||++ +.|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+. .+.||+||++..
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 84 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 84 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHH
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHH
Confidence 479999999986 789999999999999999999999999999875 478999999999986 478999999999
Q ss_pred HHHHHHHcCCCCC-------CCCCcccc---------CCCCCCCCCccchhhhhhcccccCCCC-------CCCcEEecc
Q 048002 192 ALNFIAKSEGLTT-------EKSYPYTA---------KDGSCELPTSMVSIIYRVHICSWNGDK-------NAPEVILDG 248 (351)
Q Consensus 192 a~~~~~~~~Gi~~-------e~~yPY~~---------~~~~c~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~~ 248 (351)
|++|+.++ |+++ |.+|||.. ..+.|.... ..+.|...... ....+.+.
T Consensus 85 a~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~-------~~p~c~~~c~~~~~~~~~~~~~~~~~- 155 (266)
T 3cbj_A 85 AWNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEG-------DTPKCSKICEPGYSPTYKQDKHYGYN- 155 (266)
T ss_dssp HHHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCC-------CCCCCCCSCCTTCCSCTGGGCBCBSC-
T ss_pred HHHHHHHh-CcCcCccccccccccCcccccccccccCCCCCCcccc-------CCCccccccCCCCcceeeeeeeeeee-
Confidence 99999997 9999 99999983 345664321 11112111000 00112223
Q ss_pred eEEcCCChHHHHHHHH-hcCCEEEEEecCCCCccCCCC-------------------ccccCCCCccEEEEEcCCCCCcc
Q 048002 249 YEMVPESDENALMKAV-ANQPVAVAIDAGGKDFQFYSE-------------------GYGATQDGTKYWIVKNSWGTDWE 308 (351)
Q Consensus 249 ~~~v~~~~~~~i~~~l-~~gPV~v~~~~~~~~f~~Y~~-------------------Gyg~~~~g~~yWivkNSWG~~WG 308 (351)
+..++ .++++||++| .+|||+|+|++. .+|++|++ |||++ +|++|||||||||++||
T Consensus 156 ~~~v~-~~~~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~-~g~~yWivkNSWG~~WG 232 (266)
T 3cbj_A 156 SYSVS-NSEKDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVE-NGTPYWLVANSWNTDWG 232 (266)
T ss_dssp CEECC-SCHHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTST
T ss_pred eEEeC-CCHHHHHHHHHhcCCEEEEEEec-cchhhcCCeEEecCCCCccCCeEEEEEEeccc-CCceEEEEEcCCCCccC
Confidence 33565 4789999998 569999999997 78999987 99987 89999999999999999
Q ss_pred CCceEEEEecCCCCCCCcccccccceeeecCC
Q 048002 309 EKGYIRMLRGIDAEEGLCGITLEASYPVKLHP 340 (351)
Q Consensus 309 e~Gy~~i~r~~~~~~~~Cgi~~~~~yp~~~~~ 340 (351)
|+|||||+|+. |.|||++.+++++..-.
T Consensus 233 e~Gy~~i~rg~----n~cgI~~~~~~~~p~~~ 260 (266)
T 3cbj_A 233 DNGFFKILRGQ----DHCGIESEVVAGIPRTD 260 (266)
T ss_dssp BTTEEEEECSS----CGGGTTTSCEECCBCCC
T ss_pred CCCEEEEEcCC----CcccccCceEEEEeecc
Confidence 99999999985 46999999998876543
No 37
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=8.7e-53 Score=386.01 Aligned_cols=202 Identities=33% Similarity=0.651 Sum_probs=161.2
Q ss_pred CCCCceeccCC----CCCCccCCCCCCchHHHHHHHHHhhhhHHHhhC--CCccCCHHHhhhcCC-CCCCCCCCchHHHH
Q 048002 121 DLPPSVDWRKQ----GAVTGVKDQGRCGSCWAFSTVVSVEGINKIKTG--ELWSLSEQELVDCDK-DNHGCDGGLMEQAL 193 (351)
Q Consensus 121 ~lP~~~Dwr~~----g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~--~~~~lS~q~l~dc~~-~~~gC~GG~~~~a~ 193 (351)
+||++||||++ +.|+||||||.||||||||++++||++++|+++ ..+.||+|+|+||+. .+.||+||++..|+
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 68999999997 689999999999999999999999999999976 679999999999986 56899999999999
Q ss_pred HHHHHcCCCCCCCCC-------ccc---------cCCCCCCCCCccchhhhhhcccccCCCC--CCCc----EEecceEE
Q 048002 194 NFIAKSEGLTTEKSY-------PYT---------AKDGSCELPTSMVSIIYRVHICSWNGDK--NAPE----VILDGYEM 251 (351)
Q Consensus 194 ~~~~~~~Gi~~e~~y-------PY~---------~~~~~c~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~i~~~~~ 251 (351)
+|++++ ||++|.+| ||. +..+.|..... +.+.|...... .... ........
T Consensus 82 ~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~------~~~~c~~~c~~~~~~~~~~~~~~~~~~~~ 154 (254)
T 3qsd_A 82 DYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIY------KTPRCKQTCQKKYKTPYTQDKHRGKSSYN 154 (254)
T ss_dssp HHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCC------CCCCCCCCCCTTCCSCGGGGCBCCSEEEE
T ss_pred HHHHHc-CCCcccccccCcCcCCcccccccccccCcCCCCccccc------CCccccccccCCccceeeeeeeeeeeeEe
Confidence 999998 99999888 997 34455653210 11111110000 0000 01111224
Q ss_pred cCCChHHHHHHHH-hcCCEEEEEecCCCCccCCCC-------------------ccccCCCCccEEEEEcCCCCCccCCc
Q 048002 252 VPESDENALMKAV-ANQPVAVAIDAGGKDFQFYSE-------------------GYGATQDGTKYWIVKNSWGTDWEEKG 311 (351)
Q Consensus 252 v~~~~~~~i~~~l-~~gPV~v~~~~~~~~f~~Y~~-------------------Gyg~~~~g~~yWivkNSWG~~WGe~G 311 (351)
++ .++++||++| .+|||+|+|++. .+|++|++ |||++ +|++|||||||||++|||+|
T Consensus 155 ~~-~~~~~i~~~l~~~gPv~~~~~~~-~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~-~g~~ywivkNSWG~~WG~~G 231 (254)
T 3qsd_A 155 VK-NDEKAIQKEIMKYGPVEAGFTVY-EDFLNYKSGIYKHITGETLGGHAIRIIGWGVE-NKAPYWLIANSWNEDWGENG 231 (254)
T ss_dssp CC-SCHHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTT
T ss_pred cC-CcHHHHHHHHHHcCCEEEEEEec-cccccccCCeeccCCCCCCCCeEEEEEEEeec-CCeeEEEEEeCCCCCcccCC
Confidence 44 4789999999 579999999997 78999987 99987 89999999999999999999
Q ss_pred eEEEEecCCCCCCCcccccccceee
Q 048002 312 YIRMLRGIDAEEGLCGITLEASYPV 336 (351)
Q Consensus 312 y~~i~r~~~~~~~~Cgi~~~~~yp~ 336 (351)
||||+|+. |.|||+++++..+
T Consensus 232 y~~i~rg~----n~CgI~~~~~~~~ 252 (254)
T 3qsd_A 232 YFRIVRGR----DECSIESEVTAGR 252 (254)
T ss_dssp EEEEECSS----CGGGTTSSEEEEE
T ss_pred eEEEEcCC----CeecCCCceEeec
Confidence 99999985 4699999887654
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=1.4e-52 Score=388.73 Aligned_cols=210 Identities=29% Similarity=0.556 Sum_probs=171.2
Q ss_pred CCCCCCCceeccCC---CCCCccCCCC---CCchHHHHHHHHHhhhhHHHhhC-C--CccCCHHHhhhcCCCCCCCCCCc
Q 048002 118 KTQDLPPSVDWRKQ---GAVTGVKDQG---RCGSCWAFSTVVSVEGINKIKTG-E--LWSLSEQELVDCDKDNHGCDGGL 188 (351)
Q Consensus 118 ~~~~lP~~~Dwr~~---g~v~pVknQg---~cGsCwAfA~~~~~e~~~~i~~~-~--~~~lS~q~l~dc~~~~~gC~GG~ 188 (351)
...+||++||||++ ++|+|||||| .||||||||++++||++++|+++ . .++||+|+|+||+. ..||+||+
T Consensus 32 ~~~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~-~~gC~GG~ 110 (277)
T 1deu_A 32 SPADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN-AGSCEGGN 110 (277)
T ss_dssp CGGGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS-SEETBEEC
T ss_pred ccccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC-CCCCCCCC
Confidence 34579999999998 6799999999 99999999999999999999875 3 47999999999985 48999999
Q ss_pred hHHHHHHHHHcCCCCCCCCCccccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHH-hcC
Q 048002 189 MEQALNFIAKSEGLTTEKSYPYTAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAV-ANQ 267 (351)
Q Consensus 189 ~~~a~~~~~~~~Gi~~e~~yPY~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l-~~g 267 (351)
+..|++|+.++ ||++|++|||...++.|..... ...+.+...|... .....+++.+|..++ ++++||++| .+|
T Consensus 111 ~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~-~~~~~~~~~c~~~--~~~~~~~i~~y~~v~--~~~~i~~~i~~~G 184 (277)
T 1deu_A 111 DLSVWDYAHQH-GIPDETCNNYQAKDQECDKFNQ-CGTCNEFKECHAI--RNYTLWRVGDYGSLS--GREKMMAEIYANG 184 (277)
T ss_dssp HHHHHHHHHHT-CBCBGGGSCCCSSCCCCCHHHH-SEEEEETTEEEEC--SSCCCBCEEEEEEEC--SHHHHHHHHHHHC
T ss_pred HHHHHHHHHHc-CCCcCccCCCcCCCCCcccccc-ccccccCcccccc--cCcceEEeceeEecC--CHHHHHHHHHHcC
Confidence 99999999987 9999999999998888873110 0000001122211 112346788888885 477888888 679
Q ss_pred CEEEEEecCCCCccCCCC-------------------ccccCCCCccEEEEEcCCCCCccCCceEEEEecCC-----CCC
Q 048002 268 PVAVAIDAGGKDFQFYSE-------------------GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGID-----AEE 323 (351)
Q Consensus 268 PV~v~~~~~~~~f~~Y~~-------------------Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~-----~~~ 323 (351)
||+|+|+++ .+|++|++ |||++ +|++|||||||||++|||+|||||+|+.+ + .
T Consensus 185 PV~v~i~~~-~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~-~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~-~ 261 (277)
T 1deu_A 185 PISCGIMAT-ERLANYTGGIYAEYQDTTYINHVVSVAGWGIS-DGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGA-R 261 (277)
T ss_dssp CEEEEECCC-HHHHTCCSSEECBCCSCCCCCEEEEEEEEEEE-TTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGG-G
T ss_pred CEEEEEecc-cccccCcCcEECCCCCCCcCCeEEEEEEeccc-CCccEEEEEeCCCCccCCCcEEEEEcCCCcccccc-c
Confidence 999999997 78999987 99987 89999999999999999999999999975 1 1
Q ss_pred CCcccccccceeee
Q 048002 324 GLCGITLEASYPVK 337 (351)
Q Consensus 324 ~~Cgi~~~~~yp~~ 337 (351)
..|||+++++|++-
T Consensus 262 ~~cgIe~~~~~~~p 275 (277)
T 1deu_A 262 YNLAIEEHCTFGDP 275 (277)
T ss_dssp TBTTTTSCEEEEEE
T ss_pred ccceeccccEeecc
Confidence 16999999998864
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=3.1e-48 Score=358.10 Aligned_cols=207 Identities=24% Similarity=0.440 Sum_probs=153.7
Q ss_pred CceeccCC-CCCC--ccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCC--CCCCCCCCchH-HHHHHHH
Q 048002 124 PSVDWRKQ-GAVT--GVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDK--DNHGCDGGLME-QALNFIA 197 (351)
Q Consensus 124 ~~~Dwr~~-g~v~--pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~--~~~gC~GG~~~-~a~~~~~ 197 (351)
.-.|||++ |+++ ||||||.||||||||++++||++++++++.++.||+|+|+||+. .+.||+||... .++.|+.
T Consensus 9 ~~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~ 88 (265)
T 2wbf_X 9 YCNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIE 88 (265)
T ss_dssp CBCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHH
T ss_pred HHHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHH
Confidence 45799999 6877 99999999999999999999999999999999999999999986 47899999654 5567887
Q ss_pred HcCCCCCCCCCccccC--CCCCCCCCccchhhhh-hcccccCCCCCCCcEEecceEEcCCC----h----HHHHHHHH-h
Q 048002 198 KSEGLTTEKSYPYTAK--DGSCELPTSMVSIIYR-VHICSWNGDKNAPEVILDGYEMVPES----D----ENALMKAV-A 265 (351)
Q Consensus 198 ~~~Gi~~e~~yPY~~~--~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~v~~~----~----~~~i~~~l-~ 265 (351)
+++||++|++|||... .+.|+..........+ ...+... .....+++.+|..++.. + +++||++| .
T Consensus 89 ~~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~ 166 (265)
T 2wbf_X 89 DYGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNK--NEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMN 166 (265)
T ss_dssp HHCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCC--CSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHH
T ss_pred HcCCCCCccccCCcCCCCCCCCCCcccccccccccccccccc--CCCceeecCCceEeeccccccchhhHHHHHHHHHHh
Confidence 7755999999999864 4678764311100000 0000000 01223457778777542 3 47899988 5
Q ss_pred cCCEEEEEecCCCCccCCC--C-------------------ccccC--CCC--ccEEEEEcCCCCCccCCceEEEEecCC
Q 048002 266 NQPVAVAIDAGGKDFQFYS--E-------------------GYGAT--QDG--TKYWIVKNSWGTDWEEKGYIRMLRGID 320 (351)
Q Consensus 266 ~gPV~v~~~~~~~~f~~Y~--~-------------------Gyg~~--~~g--~~yWivkNSWG~~WGe~Gy~~i~r~~~ 320 (351)
+|||+|+|++. +|+.|+ + |||++ ++| ++|||||||||++|||+|||||+|+..
T Consensus 167 ~GPV~v~i~~~--~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g~ 244 (265)
T 2wbf_X 167 KGSVIAYIKAE--NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGP 244 (265)
T ss_dssp HSCEEEEECGG--GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSCC
T ss_pred cCCEEEEEEcc--cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecCC
Confidence 69999999985 576663 2 99984 255 689999999999999999999997532
Q ss_pred CCCCCccccc---ccceeee
Q 048002 321 AEEGLCGITL---EASYPVK 337 (351)
Q Consensus 321 ~~~~~Cgi~~---~~~yp~~ 337 (351)
|.|||+. .+.||+-
T Consensus 245 ---n~Cgi~~~~~~~~~~~~ 261 (265)
T 2wbf_X 245 ---THCHFNFIHSVVIFNVD 261 (265)
T ss_dssp ---TTCSSCSCCEEEEECEE
T ss_pred ---CccCcceeEEEEecccc
Confidence 4699655 5556543
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=1.5e-46 Score=350.98 Aligned_cols=226 Identities=20% Similarity=0.290 Sum_probs=162.3
Q ss_pred eEEEcccCCCCChhhhhhhcCCccccCccCCCCCCccccccCC--CCCCCCceeccCCCCCCccCCCCCCchHHHHHHHH
Q 048002 76 YKLRLNRFADMTNHEFMSSRSSKVSHHRMLHGPRRQTGFMHGK--TQDLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVV 153 (351)
Q Consensus 76 ~~~g~N~FsD~t~eEf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~ 153 (351)
..-..|.+.++..|.++..+ |..+....+.... +.... ..+||++||||+++ ||||||.||||||||+++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~l-G~~p~~~d~rd~~----~~~~~~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~~ 85 (291)
T 3ois_A 14 LVPRGSHMQTVLKRRKKSGY-GYIPDIADIRDFS----YTPEKSVIAALPPKVDLTPPF---QVYDQGRIGSCTANALAA 85 (291)
T ss_dssp ---------CCCCCCCCTTC-CEECCCCCTTCCB----CCCCHHHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHHH
T ss_pred cccchhhHhHhhhccccccC-CCCCCCCcccccc----cCCCccccccCCcceecccCC---CcccCCCCccHHHHHHHH
Confidence 44567899999999987654 6555221111111 11111 24799999999984 999999999999999999
Q ss_pred HhhhhHHHhhCCCccCCHHHhh--hcCC---C-CCCCCCCchHHHHHHHHHcCCCCCCCCCccccCC---CCCCCCCccc
Q 048002 154 SVEGINKIKTGELWSLSEQELV--DCDK---D-NHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAKD---GSCELPTSMV 224 (351)
Q Consensus 154 ~~e~~~~i~~~~~~~lS~q~l~--dc~~---~-~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---~~c~~~~~~~ 224 (351)
++|++++ +++..+.||+|+|+ +|.. . ..+|.||++..|++|+.++ ||++|++|||.+.. +.|...+...
T Consensus 86 alE~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~~~~ 163 (291)
T 3ois_A 86 AIQFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPPGAP 163 (291)
T ss_dssp HHHHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCTTCG
T ss_pred HHHHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCCCcccccccccccccc
Confidence 9999876 56777899999998 6763 2 3468899999999999997 99999999999874 4676532100
Q ss_pred hhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHh-cCCEEEEEecCCCCccCCCC------------------
Q 048002 225 SIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVA-NQPVAVAIDAGGKDFQFYSE------------------ 285 (351)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~Y~~------------------ 285 (351)
....+...|.. ....+++.+|..++. ++++|+++|. .|||+|+|+++ .+|+.|++
T Consensus 164 ~~~~p~~~C~~----~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV~v~~~~~-~~f~~y~~~~Gi~~~~~~~~~~~~~H 237 (291)
T 3ois_A 164 ASKKPSDQCYK----DAQNYKITEYSRVAQ-DIDHLKACLAVGSPFVFGFSVY-NSWVGNNSLPVRIPLPTKNDTLEGGH 237 (291)
T ss_dssp GGSCCCHHHHH----HHGGGCCCEEEECCS-CHHHHHHHHHTTCCEEEEEEEE-HHHHGGGCCCSBCCCCCTTSCEEEEE
T ss_pred ccCCCCHHHHh----hcccceeccEEEcCc-CHHHHHHHHHcCCCEEEEEEec-cchhhcCCCCeEEeCCCCCCCCcCCe
Confidence 01111122221 123467889999976 8999999995 57999999997 78887763
Q ss_pred -----ccccCCCCccEEEEEcCCCCCccCCceEEEEecCC
Q 048002 286 -----GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRGID 320 (351)
Q Consensus 286 -----Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~ 320 (351)
||| ++++|||||||||++|||+|||||+|+.-
T Consensus 238 av~iVGy~---~~~~ywivkNSWG~~WG~~Gy~~i~~~~~ 274 (291)
T 3ois_A 238 AVLCVGYD---DEIRHFRIRNSWGNNVGEDGYFWMPYEYI 274 (291)
T ss_dssp EEEEEEEE---TTTTEEEEECSBCTTSTBTTEEEEEHHHH
T ss_pred EEEEEEEe---CCCCEEEEEeCCCCCCCCCcEEEEEHHHh
Confidence 776 45789999999999999999999999853
No 41
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=1.9e-35 Score=287.22 Aligned_cols=89 Identities=21% Similarity=0.274 Sum_probs=70.1
Q ss_pred CCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHh-hCCCccCCH----------------HHhhhcCC----
Q 048002 121 DLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIK-TGELWSLSE----------------QELVDCDK---- 179 (351)
Q Consensus 121 ~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~-~~~~~~lS~----------------q~l~dc~~---- 179 (351)
..|..|+++....+|||||||.||+|||||+++++|+.++++ +++.++||+ |+|+||+.
T Consensus 52 ~~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~ 131 (457)
T 2e01_A 52 QDNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDID 131 (457)
T ss_dssp HCCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTT
T ss_pred CCCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCccc
Confidence 356788888888899999999999999999999999999998 788999999 78899975
Q ss_pred --------CCCCCCCCchHHHHHHHHHcCCCCCCCCCcc
Q 048002 180 --------DNHGCDGGLMEQALNFIAKSEGLTTEKSYPY 210 (351)
Q Consensus 180 --------~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY 210 (351)
.+.||+||.+..++.++.+. ||+++++|||
T Consensus 132 ~r~v~~l~~~~gcdGG~~~~a~~~i~ky-Givpe~~yP~ 169 (457)
T 2e01_A 132 SRLVQYLLAAPTEDGGQYSMFLNLVKKY-GLIPKDLYGD 169 (457)
T ss_dssp SHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCS
T ss_pred chhhhhhccCCCCCCCCHHHHHHHHHHc-CccchhhcCC
Confidence 37899999999999999887 9999999999
No 42
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=1.6e-35 Score=287.43 Aligned_cols=92 Identities=21% Similarity=0.295 Sum_probs=83.5
Q ss_pred CCCCceeccCCCCCCccCCCCCCchHHHHHHHHHhhhhHHHh-hCCCccCCH----------------HHhhhcCCC---
Q 048002 121 DLPPSVDWRKQGAVTGVKDQGRCGSCWAFSTVVSVEGINKIK-TGELWSLSE----------------QELVDCDKD--- 180 (351)
Q Consensus 121 ~lP~~~Dwr~~g~v~pVknQg~cGsCwAfA~~~~~e~~~~i~-~~~~~~lS~----------------q~l~dc~~~--- 180 (351)
..|..|+++....++||+|||.||+|||||+++++|+.++++ +++.++||+ |+|+||+..
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 457788888888899999999999999999999999999998 578999999 999999743
Q ss_pred -----------CCCCCCCchHHHHHHHHHcCCCCCCCCCccccC
Q 048002 181 -----------NHGCDGGLMEQALNFIAKSEGLTTEKSYPYTAK 213 (351)
Q Consensus 181 -----------~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~ 213 (351)
+.||+||.+..++.++.+. |++++++|||+..
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~ky-Gl~p~~~yP~~~~ 169 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEKY-GVIPKKCFPESYT 169 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHHH-CCCBGGGSCCCTG
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHHc-Cccchhhcccccc
Confidence 6899999999999999886 9999999999763
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=99.97 E-value=1.9e-31 Score=253.79 Aligned_cols=76 Identities=29% Similarity=0.344 Sum_probs=71.6
Q ss_pred CCCccCCCCCCchHHHHHHHHHhhhhHHHhhCCCccCCHHHhhhcCC------------CCCCCCCCchHHHHHHHHHcC
Q 048002 133 AVTGVKDQGRCGSCWAFSTVVSVEGINKIKTGELWSLSEQELVDCDK------------DNHGCDGGLMEQALNFIAKSE 200 (351)
Q Consensus 133 ~v~pVknQg~cGsCwAfA~~~~~e~~~~i~~~~~~~lS~q~l~dc~~------------~~~gC~GG~~~~a~~~~~~~~ 200 (351)
.++||||||.||||||||+++++|+.+++++++.+.||+|+|++|+. .+.||+||.+..|++|+.++
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~- 99 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF- 99 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-
Confidence 48999999999999999999999999999999999999999999974 25799999999999999997
Q ss_pred CCCCCCCCc
Q 048002 201 GLTTEKSYP 209 (351)
Q Consensus 201 Gi~~e~~yP 209 (351)
||+++++||
T Consensus 100 Givpe~~YP 108 (383)
T 3pw3_A 100 GLVPEEEMR 108 (383)
T ss_dssp CCCBGGGSC
T ss_pred CcCcHHhCC
Confidence 999999999
No 44
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.76 E-value=1.5e-18 Score=136.10 Aligned_cols=74 Identities=28% Similarity=0.410 Sum_probs=69.1
Q ss_pred CCHHHHHHHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHHHccCCCCeEEEcccCCCCChhhhhhhcCCccc
Q 048002 27 ASEECLWDLYERWRSHH-TVSRDLKEKQIRFNVFKQNLKRIHKVNQMDKPYKLRLNRFADMTNHEFMSSRSSKVS 100 (351)
Q Consensus 27 ~~~~~~~~~f~~~~~~~-k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~~~s~~~g~N~FsD~t~eEf~~~~~~~~~ 100 (351)
.++..+...|++|+++| |.|.+.+|+..|+.||++|+++|++||+.+.+|++|+|+|+|||.+||++.++|.+.
T Consensus 16 ~~~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~~~sy~lglN~FaDLT~eEF~~~~lg~~~ 90 (106)
T 3f75_P 16 WKEAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQGYSYSLKMNHFGDLSRDEFRRKYLGFKK 90 (106)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTSCCSEEECCCTTTTCCHHHHHHHSCCBCC
T ss_pred cCcHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCCeeeCCcccccCCHHHHHHHHcCCCC
Confidence 56678899999999999 999998999999999999999999999988899999999999999999999987654
No 45
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.66 E-value=4.9e-17 Score=121.76 Aligned_cols=64 Identities=23% Similarity=0.422 Sum_probs=58.2
Q ss_pred HHHHHHHHhc-cccCChHHHHHHHHHHHHHHHHHHHHccC----CCCeEEEcccCCCCChhhhhhhcCCcc
Q 048002 34 DLYERWRSHH-TVSRDLKEKQIRFNVFKQNLKRIHKVNQM----DKPYKLRLNRFADMTNHEFMSSRSSKV 99 (351)
Q Consensus 34 ~~f~~~~~~~-k~Y~~~~E~~~R~~~f~~n~~~I~~~N~~----~~s~~~g~N~FsD~t~eEf~~~~~~~~ 99 (351)
..|++|+.+| |.|.+.+|+..| .||++|++.|++||+. ..+|++|+|+|+|||.+|| +.++|..
T Consensus 8 ~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~ 76 (80)
T 2l95_A 8 EEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKK 76 (80)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSC
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCC
Confidence 5799999999 999888899999 9999999999999986 3789999999999999999 8777644
No 46
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=76.07 E-value=26 Score=32.37 Aligned_cols=120 Identities=14% Similarity=0.081 Sum_probs=77.3
Q ss_pred CCCCCchHHHHHHHHHhhhhHHHh--------hCCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHcCCCCCCCCCcc
Q 048002 139 DQGRCGSCWAFSTVVSVEGINKIK--------TGELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEGLTTEKSYPY 210 (351)
Q Consensus 139 nQg~cGsCwAfA~~~~~e~~~~i~--------~~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY 210 (351)
.||.-+=|-+||.+++|-+..... ..-...+|+++|.+ .|..+...++|++.. |.-.
T Consensus 202 TQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~--------ts~~~~q~Iky~qsy-G~~~------ 266 (367)
T 1x9y_A 202 QQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN--------CATFPNQMIEYGKSQ-GRDI------ 266 (367)
T ss_dssp CCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGG--------CCCCHHHHHHHHHHT-TEEE------
T ss_pred ccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh--------cCCCHHHHHHHHHHh-Ccch------
Confidence 699999999999999887643211 01124677778777 456788899998854 5211
Q ss_pred ccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHh-cCCEEEEEecCCCCccC-CCC---
Q 048002 211 TAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVA-NQPVAVAIDAGGKDFQF-YSE--- 285 (351)
Q Consensus 211 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~-~gPV~v~~~~~~~~f~~-Y~~--- 285 (351)
.-... ..+.+.+++.+. +.||.|.+......... ..+
T Consensus 267 ------------------------------------~~~n~--~ls~deVk~~id~Nk~I~v~~~~v~~~~n~~~~gHAl 308 (367)
T 1x9y_A 267 ------------------------------------HYQEG--VPSYNQVDQLTKDNVGIMILAQSVSQNPNDPHLGHAL 308 (367)
T ss_dssp ------------------------------------EEEES--CCCHHHHHHHHHTTCCEEEEEEETTSCSSSCCCSEEE
T ss_pred ------------------------------------hhhcC--CCCHHHHHHHHhcCCcEEEEccccccCCCCccCceeE
Confidence 00011 124677888884 56999988764232221 222
Q ss_pred ---ccccCCCCccEEEEEcCCCCCccCCceEEEEe
Q 048002 286 ---GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLR 317 (351)
Q Consensus 286 ---Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r 317 (351)
||... ++.+|.++-|=|- ++++-+..
T Consensus 309 avvGyA~~-~~~~~y~~WNPW~-----~~~~~~sa 337 (367)
T 1x9y_A 309 AVVGNAKI-NDQEKLIYWNPWD-----TELSIQDA 337 (367)
T ss_dssp EEEEEEEE-TTEEEEEEECTTC-----SSCEEEET
T ss_pred EEEecccc-CCCcEEEEecCcc-----CCceeecC
Confidence 99765 5889999999993 44666554
No 47
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=74.39 E-value=36 Score=28.25 Aligned_cols=121 Identities=13% Similarity=0.085 Sum_probs=79.4
Q ss_pred CCCCCchHHHHHHHHHhhhhHHHhh--------CCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHcCCCCCCCCCcc
Q 048002 139 DQGRCGSCWAFSTVVSVEGINKIKT--------GELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEGLTTEKSYPY 210 (351)
Q Consensus 139 nQg~cGsCwAfA~~~~~e~~~~i~~--------~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY 210 (351)
.||.-+=|-+|+.+++|-+...... .-...+|+++|.+ .|..+...++|++.. |-...
T Consensus 26 TQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~--------t~~~~~q~Iky~~s~-G~~~~----- 91 (183)
T 1pxv_A 26 QQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPN--------CATFPNQMIEYGKSQ-GRDIH----- 91 (183)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGG--------CCBCHHHHHHHHHHT-TCCCE-----
T ss_pred ccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhh--------cCCCHHHHHHHHHHc-CcChh-----
Confidence 7999999999999998876542111 1124688888877 456788999998864 42210
Q ss_pred ccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhc-CCEEEEEecCCCCccC-CCC---
Q 048002 211 TAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVAN-QPVAVAIDAGGKDFQF-YSE--- 285 (351)
Q Consensus 211 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~-gPV~v~~~~~~~~f~~-Y~~--- 285 (351)
+.. ...+.+.+++.+.+ .||.|...-..+.... ..+
T Consensus 92 --------------------------------------~~n-r~ls~neV~~~i~~Nk~I~v~~~~v~e~~~~~~~gHA~ 132 (183)
T 1pxv_A 92 --------------------------------------YQE-GVPSYNQVDQLTKDNVGIMILAQSVSQNPNDPHLGHAL 132 (183)
T ss_dssp --------------------------------------EEE-SCCCHHHHHHHHHTTCCEEEEEECCCSSTTSCCCEEEE
T ss_pred --------------------------------------Hhc-CCCCHHHHHHHHhcCCcEEEEccccccCCCCccCceeE
Confidence 000 01256788999955 5998877643233332 222
Q ss_pred ---ccccCCCCccEEEEEcCCCCCccCCceEEEEec
Q 048002 286 ---GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLRG 318 (351)
Q Consensus 286 ---Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~ 318 (351)
||-.- ++.++.+|=|=|- +|++-+..+
T Consensus 133 av~Gya~~-~~~~~y~~WNPW~-----~~~~~~~a~ 162 (183)
T 1pxv_A 133 AVVGNAKI-NDQEKLIYWNPWD-----TELSIQDAD 162 (183)
T ss_dssp EEEEEEEE-TTEEEEEEECTTC-----SSCEEEETT
T ss_pred EEEeeeec-CCCeEEEEeCCcc-----CCcEeecCC
Confidence 88876 6889999999993 477766644
No 48
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=49.76 E-value=1.1e+02 Score=25.24 Aligned_cols=120 Identities=16% Similarity=0.179 Sum_probs=77.3
Q ss_pred CCCCCchHHHHHHHHHhhhhHHHhh--------CCCccCCHHHhhhcCCCCCCCCCCchHHHHHHHHHcCCCCCCCCCcc
Q 048002 139 DQGRCGSCWAFSTVVSVEGINKIKT--------GELWSLSEQELVDCDKDNHGCDGGLMEQALNFIAKSEGLTTEKSYPY 210 (351)
Q Consensus 139 nQg~cGsCwAfA~~~~~e~~~~i~~--------~~~~~lS~q~l~dc~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY 210 (351)
.||.-+=|-+||.+++|-+...... .-...+|+++|..+ |..+...++|++.. |--. + +
T Consensus 17 TQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~--------~~t~~e~iky~~s~-g~~~--~--~ 83 (174)
T 1cv8_A 17 TQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFT--------GLTPREMIYFGQTQ-GRSP--Q--L 83 (174)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHC--------CCCHHHHHHHHHHT-TCCC--E--E
T ss_pred ccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhc--------CCCHHHHHHHHHHc-CCCh--h--h
Confidence 6999999999999999876542111 11357899999854 45678899998776 3210 0 0
Q ss_pred ccCCCCCCCCCccchhhhhhcccccCCCCCCCcEEecceEEcCCChHHHHHHHHhcC-CEEEEEecCCCCccC-CCC---
Q 048002 211 TAKDGSCELPTSMVSIIYRVHICSWNGDKNAPEVILDGYEMVPESDENALMKAVANQ-PVAVAIDAGGKDFQF-YSE--- 285 (351)
Q Consensus 211 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~~i~~~l~~g-PV~v~~~~~~~~f~~-Y~~--- 285 (351)
. ....+.+++++++.++ |+.|..+-. +.... ..+
T Consensus 84 -----------------------------------~-----n~~ls~~eV~~~~~~nk~i~i~~~~v-e~~~~~~~gHAl 122 (174)
T 1cv8_A 84 -----------------------------------L-----NRMTTYNEVDNLTKNNKGIAILGSRV-ESRNGMHAGHAM 122 (174)
T ss_dssp -----------------------------------E-----SSCCCHHHHHHHHHTTCCEEEEEEES-SCBTTBCCEEEE
T ss_pred -----------------------------------h-----cCCCCHHHHHHHHhcCCceEEEcccc-cCCCCCCCceeE
Confidence 0 0112467788888654 998877654 22221 222
Q ss_pred ---ccccCCCCccEEEEEcCCCCCccCCceEEEEe
Q 048002 286 ---GYGATQDGTKYWIVKNSWGTDWEEKGYIRMLR 317 (351)
Q Consensus 286 ---Gyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r 317 (351)
||-.-.+|.+|.++=|=| +++.+-+.-
T Consensus 123 av~Gy~~~~ng~~~y~~WNPW-----~~~~~~~s~ 152 (174)
T 1cv8_A 123 AVVGNAKLNNGQEVIIIWNPW-----DNGFMTQDA 152 (174)
T ss_dssp EEEEEEEETTSCEEEEEECTT-----CSSCEEEET
T ss_pred EEEeeeeecCCceEEEEeCCc-----cCCcEEecC
Confidence 888755788999999999 445554443
No 49
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=20.24 E-value=30 Score=24.35 Aligned_cols=26 Identities=12% Similarity=0.101 Sum_probs=19.0
Q ss_pred CCccCCCCCCchHHHHHHHHHhhhhHHH
Q 048002 134 VTGVKDQGRCGSCWAFSTVVSVEGINKI 161 (351)
Q Consensus 134 v~pVknQg~cGsCwAfA~~~~~e~~~~i 161 (351)
+--|+=||.|++| ......+|..++-
T Consensus 37 ~V~v~l~GaC~gc--~Tlk~gIe~~L~~ 62 (74)
T 1th5_A 37 IVKVRLTGPAAVV--RTVRIAVSKKLRE 62 (74)
T ss_dssp EEEECCCSSSSSS--SSHHHHHHHHHHH
T ss_pred EEEEEEecCCcch--HHHHHHHHHHHHH
Confidence 4468899999999 3444678877664
Done!