Query 048006
Match_columns 833
No_of_seqs 874 out of 4963
Neff 10.1
Searched_HMMs 13730
Date Mon Mar 25 08:59:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048006.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/048006hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 4.3E-39 3.1E-43 338.1 16.9 294 10-353 2-303 (313)
2 d1ogqa_ c.10.2.8 (A:) Polygala 100.0 2E-32 1.4E-36 287.0 18.4 259 485-779 50-312 (313)
3 d2omza2 c.10.2.1 (A:33-416) In 99.9 1.5E-25 1.1E-29 242.0 32.0 356 269-744 28-383 (384)
4 d2omza2 c.10.2.1 (A:33-416) In 99.9 2.3E-25 1.6E-29 240.6 32.6 85 84-176 41-125 (384)
5 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 4.8E-25 3.5E-29 226.6 18.4 259 488-790 14-273 (284)
6 d1xkua_ c.10.2.7 (A:) Decorin 99.9 2.8E-23 2E-27 215.9 27.3 223 485-747 31-255 (305)
7 d1xkua_ c.10.2.7 (A:) Decorin 99.9 1.7E-23 1.3E-27 217.5 24.1 269 46-354 10-285 (305)
8 d1ozna_ c.10.2.7 (A:) Reticulo 99.9 4.1E-24 3E-28 219.5 15.5 235 485-753 32-267 (284)
9 d1p9ag_ c.10.2.7 (G:) von Will 99.9 5.7E-23 4.2E-27 208.3 19.8 203 509-751 10-212 (266)
10 d1p9ag_ c.10.2.7 (G:) von Will 99.9 1.9E-22 1.4E-26 204.5 19.8 205 531-775 8-213 (266)
11 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 4.7E-17 3.4E-21 172.2 32.4 54 87-149 38-91 (353)
12 d1jl5a_ c.10.2.6 (A:) Leucine 99.8 5.4E-17 3.9E-21 171.8 32.8 96 59-175 39-134 (353)
13 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 2.6E-20 1.9E-24 205.5 0.4 60 241-300 4-68 (460)
14 d1z7xw1 c.10.1.1 (W:1-460) Rib 99.8 2.4E-21 1.7E-25 214.0 -8.5 113 88-200 3-125 (460)
15 d1h6ua2 c.10.2.1 (A:36-262) In 99.8 1.5E-17 1.1E-21 163.7 19.3 189 83-295 37-225 (227)
16 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 3.3E-17 2.4E-21 161.2 19.2 193 86-302 18-210 (227)
17 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 2E-17 1.4E-21 164.9 15.0 77 665-742 156-233 (242)
18 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.7 2.8E-17 2E-21 163.8 14.8 200 485-717 29-232 (242)
19 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 1E-17 7.6E-22 159.7 9.8 87 665-751 57-143 (192)
20 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.7 6.4E-17 4.7E-21 154.2 12.8 173 442-619 11-183 (192)
21 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 3.3E-16 2.4E-20 151.5 17.0 165 86-296 45-209 (210)
22 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 4.1E-16 3E-20 150.7 17.6 165 111-326 45-209 (210)
23 d2omxa2 c.10.2.1 (A:37-235) In 99.7 6.5E-16 4.7E-20 148.0 18.4 162 85-292 38-199 (199)
24 d2omxa2 c.10.2.1 (A:37-235) In 99.7 1.1E-15 7.9E-20 146.4 18.5 177 92-322 23-199 (199)
25 d2astb2 c.10.1.3 (B:2136-2419) 99.6 2.6E-16 1.9E-20 159.9 2.4 195 112-311 46-249 (284)
26 d2astb2 c.10.1.3 (B:2136-2419) 99.6 1.7E-15 1.3E-19 153.8 7.9 58 88-145 47-104 (284)
27 d1dcea3 c.10.2.2 (A:444-567) R 99.5 3.2E-14 2.3E-18 123.6 11.4 104 90-201 1-104 (124)
28 d1dcea3 c.10.2.2 (A:444-567) R 99.5 8.9E-14 6.5E-18 120.7 10.2 120 62-192 2-122 (124)
29 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.4 5.1E-15 3.7E-19 155.4 0.3 239 484-749 30-317 (344)
30 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 1.7E-13 1.2E-17 125.4 10.4 63 553-619 14-76 (162)
31 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 2E-13 1.5E-17 124.8 9.8 125 484-612 17-145 (162)
32 d2ca6a1 c.10.1.2 (A:2-345) Rna 99.4 3.1E-14 2.3E-18 149.3 4.2 207 79-304 23-260 (344)
33 d2ifga3 c.10.2.7 (A:36-191) Hi 99.4 6.4E-13 4.7E-17 120.5 10.9 109 665-774 11-120 (156)
34 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 1.9E-13 1.4E-17 129.8 -1.2 130 573-740 40-180 (198)
35 d2ifga3 c.10.2.7 (A:36-191) Hi 99.2 2.2E-11 1.6E-15 110.2 11.7 86 664-750 33-119 (156)
36 d1m9la_ c.10.3.1 (A:) Outer ar 99.2 4.5E-13 3.3E-17 127.1 -1.9 132 552-723 43-185 (198)
37 d1koha1 c.10.2.3 (A:201-362) m 98.2 3.3E-08 2.4E-12 89.5 -1.8 79 662-740 65-152 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 98.2 8.7E-08 6.3E-12 86.6 0.3 54 663-716 92-152 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 97.6 1.8E-05 1.3E-09 71.2 3.9 90 85-174 13-113 (167)
40 d1pgva_ c.10.1.1 (A:) Tropomod 97.5 2.3E-05 1.6E-09 70.6 4.2 81 665-745 47-142 (167)
41 d1io0a_ c.10.1.1 (A:) Tropomod 96.9 5.4E-05 3.9E-09 68.1 -0.4 115 83-197 13-142 (166)
42 d1io0a_ c.10.1.1 (A:) Tropomod 96.8 0.0003 2.2E-08 62.9 3.2 45 260-304 14-63 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=100.00 E-value=4.3e-39 Score=338.11 Aligned_cols=294 Identities=29% Similarity=0.398 Sum_probs=208.7
Q ss_pred CCCHHHHHHHHHhhhcCcCCCCCCCCCCCCCCCCCCC--cccceEecCCC--CcEEEEECCCCCCCCCCcce--ecCccc
Q 048006 10 RCIDEEREALLTFKASLVDESGVLSSWGPEDEKRDCC--KWTGLRCSNKT--NHVILLDLQPIDFDSFPLRG--TISPAL 83 (833)
Q Consensus 10 ~~~~~~~~~ll~~k~~~~~~~~~~~~w~~~~~~~~~c--~w~gv~c~~~~--~~v~~l~L~~~~~~~~~l~~--~~~~~l 83 (833)
-|.++|++||++||+++.+|. .+++|. .++||| .|+||+|+..+ +||++|+|++ +.++| .+|+++
T Consensus 2 ~c~~~e~~aLl~~k~~~~~~~-~l~sW~---~~~d~C~~~w~gv~C~~~~~~~~v~~L~L~~-----~~l~g~~~lp~~l 72 (313)
T d1ogqa_ 2 LCNPQDKQALLQIKKDLGNPT-TLSSWL---PTTDCCNRTWLGVLCDTDTQTYRVNNLDLSG-----LNLPKPYPIPSSL 72 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCC---TTSCTTTTCSTTEEECCSSSCCCEEEEEEEC-----CCCSSCEECCGGG
T ss_pred CCCHHHHHHHHHHHHHCCCCC-cCCCCC---CCCCCCCCcCCCeEEeCCCCcEEEEEEECCC-----CCCCCCCCCChHH
Confidence 499999999999999998874 799998 478999 49999998644 4899999999 66766 578899
Q ss_pred cCCCCCCEEeCCC-CCCCCCCccccccCCCCCCEEEccCCCCCCCCCcccCCccccceecccCccCCCCCCcccccCCCC
Q 048006 84 LKLHDLRHLNLSF-NDFSGSPIPEFIGSLSKLRYLDLFGTVFAGPIPPQLGNLSRLQHLDLGSNYLFSTGNLDWLSHLSY 162 (833)
Q Consensus 84 ~~l~~L~~L~Ls~-n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~~l~~l~~ 162 (833)
+++++|++|+|++ |+++|. +|+.|+++++|++|+|++|++.+..|..+..+.+|++++++.|.+.. .
T Consensus 73 ~~L~~L~~L~Ls~~N~l~g~-iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~-~---------- 140 (313)
T d1ogqa_ 73 ANLPYLNFLYIGGINNLVGP-IPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSG-T---------- 140 (313)
T ss_dssp GGCTTCSEEEEEEETTEESC-CCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEES-C----------
T ss_pred hcCccccccccccccccccc-cccccccccccchhhhccccccccccccccchhhhcccccccccccc-c----------
Confidence 9999999999986 788875 89999999999999999999988888888888888888888887653 2
Q ss_pred CcEEecCCCCCCCCchhHHhhcCCCCCCEEEccCCCCCCCCCccccccccCCCCCEEEccCCcCCCCCCCcccccccCCc
Q 048006 163 LRYLNLDESNLANSSDWFQVIGKLHSLKTLSLHSCYLPPVIPLSLNHLNSSTSLETLVLSDNNLTSSIYPWLPNISSIFI 242 (833)
Q Consensus 163 L~~L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~l~~~L~ 242 (833)
+|..+++++.|+++++++|.+.+.+|. ........++.+++++|++++..|..+..+.. .
T Consensus 141 ----------------~p~~l~~l~~L~~l~l~~n~l~~~ip~--~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~--~ 200 (313)
T d1ogqa_ 141 ----------------LPPSISSLPNLVGITFDGNRISGAIPD--SYGSFSKLFTSMTISRNRLTGKIPPTFANLNL--A 200 (313)
T ss_dssp ----------------CCGGGGGCTTCCEEECCSSCCEEECCG--GGGCCCTTCCEEECCSSEEEEECCGGGGGCCC--S
T ss_pred ----------------CchhhccCcccceeecccccccccccc--cccccccccccccccccccccccccccccccc--c
Confidence 333445555555555555555555554 33333222356666666666666666555543 3
Q ss_pred EEEccCccccccccccccCCCCCcEEECcCCcccccccccccCCCCCcEEEccCCCCCchhhHHHhhcCCccccCCccEE
Q 048006 243 SIDLGFNQLQGSIPESFQHMVYLEHLRLSFNELEGGIPKFFGNMCSLITLNLSNNKLSGQLSEIIQNLSSGCLENSLKSL 322 (833)
Q Consensus 243 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~~~~~~~L~~L 322 (833)
.++++.+...+.+|..+..+++++.+++++|.+.+.+| .++.+++|++|+|++|+++|.+|+.+++++ +|++|
T Consensus 201 ~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~------~L~~L 273 (313)
T d1ogqa_ 201 FVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLK------FLHSL 273 (313)
T ss_dssp EEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCT------TCCEE
T ss_pred cccccccccccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCC------CCCEE
Confidence 56777777776667667777777777777777765443 466667777777777777766666666655 55555
Q ss_pred Eccccc-ccccChhhhcCCCCCCEEECcCCcc
Q 048006 323 YLENSL-TGVISESFFSNISNLKELHLANNPL 353 (833)
Q Consensus 323 ~L~~~~-~~~i~~~~~~~l~~L~~L~L~~n~l 353 (833)
+|++|. .+.+|. +.++++|+.+++++|+.
T Consensus 274 ~Ls~N~l~g~iP~--~~~L~~L~~l~l~~N~~ 303 (313)
T d1ogqa_ 274 NVSFNNLCGEIPQ--GGNLQRFDVSAYANNKC 303 (313)
T ss_dssp ECCSSEEEEECCC--STTGGGSCGGGTCSSSE
T ss_pred ECcCCcccccCCC--cccCCCCCHHHhCCCcc
Confidence 553332 235553 45666666666666653
No 2
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.98 E-value=2e-32 Score=286.99 Aligned_cols=259 Identities=32% Similarity=0.517 Sum_probs=239.8
Q ss_pred CcccEEEcCCCcCcC--CCCCcccCCCCCcEEEccC-CcccccCCCCccCcCCccEEEcccCcCccccCccccCCCCCcE
Q 048006 485 SKLTYVDLSSNLLSG--KLPDCWWTFDSLVILNLEN-NSFSGRIPDSMGFLQNIQTLSLHNNRLTGELSSSFRNCSQLRL 561 (833)
Q Consensus 485 ~~L~~L~ls~n~l~~--~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 561 (833)
.+++.|++++|.+++ .+|..++.+++|++|+|++ |.++|.+|..++++++|++|+|++|++.+..+..+..+.+|++
T Consensus 50 ~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 129 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred EEEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcc
Confidence 468999999999987 4789999999999999997 8999999999999999999999999999999999999999999
Q ss_pred eccCCCccCCCCCcchhhcCCccceEEecCCcccccccccccCCCCC-CEEeccCCcCcccCCccccccccccccCCCCc
Q 048006 562 LDLGKNALYGEIPTWMGESLSNLIVLSLKSNKFHGKIPFQLCQLAFL-QVLDLSLNNISGKIPKCFNNFTAMTQERSSDP 640 (833)
Q Consensus 562 L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L-~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~ 640 (833)
+++++|.+.+.+|..+. .++.++++++++|.+.+.+|..+..+..+ +.+++++|++++..|..+.++..
T Consensus 130 l~l~~N~~~~~~p~~l~-~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~--------- 199 (313)
T d1ogqa_ 130 LDFSYNALSGTLPPSIS-SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNL--------- 199 (313)
T ss_dssp EECCSSEEESCCCGGGG-GCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCC---------
T ss_pred cccccccccccCchhhc-cCcccceeecccccccccccccccccccccccccccccccccccccccccccc---------
Confidence 99999999999999887 69999999999999999999999988886 88999999999988887765543
Q ss_pred ccccceEEeeccCcchhccccCcccEEEccCCcCCCCCchhhhcccCCcEEECCCccccccCCcccCCCCCCCEEeCCCC
Q 048006 641 TIKDKLMLTWKGSEREYRSTLGLVKSLELSNNNLNGAVPEEIMDLVGLVALNLSKNHLTGQISPKIGQLKSLDFLDLSRN 720 (833)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 720 (833)
..++++++...+.+|..+..+++++.+++++|.+++.+| .++.+++|+.|+|++|
T Consensus 200 ------------------------~~l~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N 254 (313)
T d1ogqa_ 200 ------------------------AFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNN 254 (313)
T ss_dssp ------------------------SEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSS
T ss_pred ------------------------ccccccccccccccccccccccccccccccccccccccc-ccccccccccccCccC
Confidence 569999999999999999999999999999999997655 6888999999999999
Q ss_pred cCcccCCccccCCCCCCEEECcCCcCccCCCCccccCccccccccCCCCCCCCCCCCCC
Q 048006 721 QLVGGIPSSLSQLSGLSVMDLSYNNLSGKIPTVTQLQSFNDTVYAGNPELCGLPLPNKC 779 (833)
Q Consensus 721 ~l~~~~p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~l~~~~~~gn~~lc~~~~~~~c 779 (833)
+++|.+|+.+.++++|++|||++|+|+|.+|+.+.+..++.+++.||+.+||.|++ .|
T Consensus 255 ~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g~plp-~c 312 (313)
T d1ogqa_ 255 RIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp CCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred eecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCccccCCCCC-CC
Confidence 99999999999999999999999999999999888899999999999999998875 66
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.94 E-value=1.5e-25 Score=241.96 Aligned_cols=356 Identities=21% Similarity=0.257 Sum_probs=214.7
Q ss_pred ECcCCcccccccccccCCCCCcEEEccCCCCCchhhHHHhhcCCccccCCccEEEcccccccccChhhhcCCCCCCEEEC
Q 048006 269 RLSFNELEGGIPKFFGNMCSLITLNLSNNKLSGQLSEIIQNLSSGCLENSLKSLYLENSLTGVISESFFSNISNLKELHL 348 (833)
Q Consensus 269 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~~~~~~~L~~L~L~~~~~~~i~~~~~~~l~~L~~L~L 348 (833)
.+..+.+++.+. ...+.+|++|+++++.++.. +.+..++ +|++|++++|.+..+++ ++++++|++|++
T Consensus 28 ~l~~~~~~~~~~--~~~l~~l~~L~l~~~~I~~l--~gl~~L~------nL~~L~Ls~N~l~~l~~--l~~L~~L~~L~L 95 (384)
T d2omza2 28 VLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSI--DGVEYLN------NLTQINFSNNQLTDITP--LKNLTKLVDILM 95 (384)
T ss_dssp HTTCSSTTSEEC--HHHHTTCCEEECCSSCCCCC--TTGGGCT------TCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred HhCCCCCCCccC--HHHhCCCCEEECCCCCCCCc--cccccCC------CCCEEeCcCCcCCCCcc--ccCCcccccccc
Confidence 455555554433 34566777778877777643 2344555 56666665555555553 555555555555
Q ss_pred cCCccccccCCCccCCccccEEEccCccCCCCCChhhcccccccEEeecCCccccccchhHHhhcccccEEEcccccccc
Q 048006 349 ANNPLVLKLSHDWVPPFQLIIISLSSCKIGPHFPKWLQTQNQIELLDISNTGISDTIPDWFWNLSNKFSFLDLASNQIKG 428 (833)
Q Consensus 349 ~~n~l~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~~~~~~~~L~~L~L~~n~l~~ 428 (833)
++|++... . .+..+++|+.|+++++.+++..+.... ..+.......|.+..
T Consensus 96 ~~n~i~~i------------------------~--~l~~l~~L~~L~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~ 146 (384)
T d2omza2 96 NNNQIADI------------------------T--PLANLTNLTGLTLFNNQITDIDPLKNL---TNLNRLELSSNTISD 146 (384)
T ss_dssp CSSCCCCC------------------------G--GGTTCTTCCEEECCSSCCCCCGGGTTC---TTCSEEEEEEEEECC
T ss_pred cccccccc------------------------c--ccccccccccccccccccccccccccc---ccccccccccccccc
Confidence 55555432 1 145555666666666655543332211 134444444444432
Q ss_pred cCCccccccCCCCCceecccCcccccCCCCCCCCceeecCCCcccccccccccccCCcccEEEcCCCcCcCCCCCcccCC
Q 048006 429 KLPNLSSRFGTSNPGIDISSNHFEGLIPPLPSNSSFLNLSKNRFSGSISFLCSISGSKLTYVDLSSNLLSGKLPDCWWTF 508 (833)
Q Consensus 429 ~~p~~~~~~~~~l~~l~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l 508 (833)
..+.. .. ......... ...... ... ...+.........|... ....+..+
T Consensus 147 ~~~~~---~~-~~~~~~~~~------------------~~~~~~----~~~--~~~~~~~~~~~~~~~~~--~~~~~~~l 196 (384)
T d2omza2 147 ISALS---GL-TSLQQLSFG------------------NQVTDL----KPL--ANLTTLERLDISSNKVS--DISVLAKL 196 (384)
T ss_dssp CGGGT---TC-TTCSEEEEE------------------ESCCCC----GGG--TTCTTCCEEECCSSCCC--CCGGGGGC
T ss_pred ccccc---cc-ccccccccc------------------cccchh----hhh--ccccccccccccccccc--cccccccc
Confidence 11110 00 000000000 000000 000 00133334444444433 23455667
Q ss_pred CCCcEEEccCCcccccCCCCccCcCCccEEEcccCcCccccCccccCCCCCcEeccCCCccCCCCCcchhhcCCccceEE
Q 048006 509 DSLVILNLENNSFSGRIPDSMGFLQNIQTLSLHNNRLTGELSSSFRNCSQLRLLDLGKNALYGEIPTWMGESLSNLIVLS 588 (833)
Q Consensus 509 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~ 588 (833)
++++.+++++|.+++..| +..+++|++|++++|+++.. ..+..+++|+.|++++|++++ ++. +. .+++|++|+
T Consensus 197 ~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~-~~~-~~-~~~~L~~L~ 269 (384)
T d2omza2 197 TNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISN-LAP-LS-GLTKLTELK 269 (384)
T ss_dssp TTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC-CGG-GT-TCTTCSEEE
T ss_pred cccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCCc--chhhcccccchhccccCccCC-CCc-cc-ccccCCEee
Confidence 778888888887776543 45567788888888887742 357778888888888888873 433 22 478888888
Q ss_pred ecCCcccccccccccCCCCCCEEeccCCcCcccCCccccccccccccCCCCcccccceEEeeccCcchhccccCcccEEE
Q 048006 589 LKSNKFHGKIPFQLCQLAFLQVLDLSLNNISGKIPKCFNNFTAMTQERSSDPTIKDKLMLTWKGSEREYRSTLGLVKSLE 668 (833)
Q Consensus 589 L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ 668 (833)
+++|++++.. .+..++.++.+++++|.+.+. ..+..++ .++.|+
T Consensus 270 l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~~--~~~~~~~--------------------------------~l~~L~ 313 (384)
T d2omza2 270 LGANQISNIS--PLAGLTALTNLELNENQLEDI--SPISNLK--------------------------------NLTYLT 313 (384)
T ss_dssp CCSSCCCCCG--GGTTCTTCSEEECCSSCCSCC--GGGGGCT--------------------------------TCSEEE
T ss_pred ccCcccCCCC--ccccccccccccccccccccc--cccchhc--------------------------------ccCeEE
Confidence 8888887543 366788888888888888642 2233333 348889
Q ss_pred ccCCcCCCCCchhhhcccCCcEEECCCccccccCCcccCCCCCCCEEeCCCCcCcccCCccccCCCCCCEEECcCC
Q 048006 669 LSNNNLNGAVPEEIMDLVGLVALNLSKNHLTGQISPKIGQLKSLDFLDLSRNQLVGGIPSSLSQLSGLSVMDLSYN 744 (833)
Q Consensus 669 Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N 744 (833)
+++|++++.. .+..+++|++|++++|++++ + +.++++++|++|++++|++++..| +.++++|+.|+|++|
T Consensus 314 ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l-~~l~~l~~L~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~N 383 (384)
T d2omza2 314 LYFNNISDIS--PVSSLTKLQRLFFANNKVSD-V-SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383 (384)
T ss_dssp CCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCCEEECCSSCCCBCGG--GTTCTTCSEEECCCE
T ss_pred CCCCCCCCCc--ccccCCCCCEEECCCCCCCC-C-hhHcCCCCCCEEECCCCcCCCChh--hccCCCCCEeeCCCC
Confidence 9999888643 37888999999999999885 3 368889999999999999987654 888899999999887
No 4
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.94 E-value=2.3e-25 Score=240.55 Aligned_cols=85 Identities=19% Similarity=0.265 Sum_probs=52.0
Q ss_pred cCCCCCCEEeCCCCCCCCCCccccccCCCCCCEEEccCCCCCCCCCcccCCccccceecccCccCCCCCCcccccCCCCC
Q 048006 84 LKLHDLRHLNLSFNDFSGSPIPEFIGSLSKLRYLDLFGTVFAGPIPPQLGNLSRLQHLDLGSNYLFSTGNLDWLSHLSYL 163 (833)
Q Consensus 84 ~~l~~L~~L~Ls~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~~l~~l~~L 163 (833)
..+.+|++|++++++|+. + +.++.+++|++|+|++|++++ +| .++++++|++|++++|.+.. ...++++++|
T Consensus 41 ~~l~~l~~L~l~~~~I~~--l-~gl~~L~nL~~L~Ls~N~l~~-l~-~l~~L~~L~~L~L~~n~i~~---i~~l~~l~~L 112 (384)
T d2omza2 41 TDLDQVTTLQADRLGIKS--I-DGVEYLNNLTQINFSNNQLTD-IT-PLKNLTKLVDILMNNNQIAD---ITPLANLTNL 112 (384)
T ss_dssp HHHTTCCEEECCSSCCCC--C-TTGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC---CGGGTTCTTC
T ss_pred HHhCCCCEEECCCCCCCC--c-cccccCCCCCEEeCcCCcCCC-Cc-cccCCccccccccccccccc---cccccccccc
Confidence 345567777777776663 3 345666777777777777664 33 26666777777777666632 2345566666
Q ss_pred cEEecCCCCCCCC
Q 048006 164 RYLNLDESNLANS 176 (833)
Q Consensus 164 ~~L~Ls~n~~~~~ 176 (833)
+.|+++++.+++.
T Consensus 113 ~~L~~~~~~~~~~ 125 (384)
T d2omza2 113 TGLTLFNNQITDI 125 (384)
T ss_dssp CEEECCSSCCCCC
T ss_pred ccccccccccccc
Confidence 6666666665553
No 5
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=4.8e-25 Score=226.58 Aligned_cols=259 Identities=20% Similarity=0.146 Sum_probs=208.4
Q ss_pred cEEEcCCCcCcCCCCCcccCCCCCcEEEccCCcccccCCCCccCcCCccEEEcccCcCccccCccccCCCCCcEeccCC-
Q 048006 488 TYVDLSSNLLSGKLPDCWWTFDSLVILNLENNSFSGRIPDSMGFLQNIQTLSLHNNRLTGELSSSFRNCSQLRLLDLGK- 566 (833)
Q Consensus 488 ~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~- 566 (833)
..++.++++++ .+|..+. +++++|+|++|+|++..+.+|.++++|++|++++|++....+..+..++.++.++...
T Consensus 14 ~~v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~ 90 (284)
T d1ozna_ 14 VTTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (284)
T ss_dssp CEEECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccc
Confidence 34566777777 4565443 5788999999999877777889999999999999999988888888888888887754
Q ss_pred CccCCCCCcchhhcCCccceEEecCCcccccccccccCCCCCCEEeccCCcCcccCCccccccccccccCCCCcccccce
Q 048006 567 NALYGEIPTWMGESLSNLIVLSLKSNKFHGKIPFQLCQLAFLQVLDLSLNNISGKIPKCFNNFTAMTQERSSDPTIKDKL 646 (833)
Q Consensus 567 n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~ 646 (833)
|.+. .++...+.++++|++|++++|.+....+..+...++|+.+++++|++++..+..|..++.|
T Consensus 91 ~~~~-~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L-------------- 155 (284)
T d1ozna_ 91 AQLR-SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNL-------------- 155 (284)
T ss_dssp TTCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC--------------
T ss_pred cccc-cccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccch--------------
Confidence 4454 6655555578999999999999887777788888999999999999987777777766665
Q ss_pred EEeeccCcchhccccCcccEEEccCCcCCCCCchhhhcccCCcEEECCCccccccCCcccCCCCCCCEEeCCCCcCcccC
Q 048006 647 MLTWKGSEREYRSTLGLVKSLELSNNNLNGAVPEEIMDLVGLVALNLSKNHLTGQISPKIGQLKSLDFLDLSRNQLVGGI 726 (833)
Q Consensus 647 ~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 726 (833)
+.|++++|++++..+..|.++++|+++++++|++++..|..|..+++|++||+++|++.+..
T Consensus 156 ------------------~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~ 217 (284)
T d1ozna_ 156 ------------------THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALP 217 (284)
T ss_dssp ------------------CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred ------------------hhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhccccccccccccccc
Confidence 89999999999888889999999999999999999999999999999999999999999998
Q ss_pred CccccCCCCCCEEECcCCcCccCCCCccccCccccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 048006 727 PSSLSQLSGLSVMDLSYNNLSGKIPTVTQLQSFNDTVYAGNPELCGLPLPNKCRDEESAAGPGI 790 (833)
Q Consensus 727 p~~l~~l~~L~~L~ls~N~l~g~ip~~~~~~~l~~~~~~gn~~lc~~~~~~~c~~~~~~~~~~~ 790 (833)
|..|..+++|++|++++|++.|.++......+++......+. ..|..|...++.+.
T Consensus 218 ~~~~~~~~~L~~L~l~~N~l~C~C~~~~l~~~l~~~~~~~~~--------~~C~~p~~l~g~~l 273 (284)
T d1ozna_ 218 TEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSE--------VPCSLPQRLAGRDL 273 (284)
T ss_dssp HHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECC--------CBEEESGGGTTCBG
T ss_pred ccccccccccCEEEecCCCCCCCccchHHHHHHHhCcCCCCc--------eEeCCchHHcCCcc
Confidence 899999999999999999999988755433344433322232 35655555555333
No 6
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.91 E-value=2.8e-23 Score=215.90 Aligned_cols=223 Identities=23% Similarity=0.290 Sum_probs=112.8
Q ss_pred CcccEEEcCCCcCcCCCCCcccCCCCCcEEEccCCcccccCCCCccCcCCccEEEcccCcCccccCccccCCCCCcEecc
Q 048006 485 SKLTYVDLSSNLLSGKLPDCWWTFDSLVILNLENNSFSGRIPDSMGFLQNIQTLSLHNNRLTGELSSSFRNCSQLRLLDL 564 (833)
Q Consensus 485 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 564 (833)
+.+++|++++|+|+...+..|.++++|++|++++|.+....|..|.+++.|++|++++|+++. +|.. ....++.|++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~-l~~~--~~~~l~~L~~ 107 (305)
T d1xkua_ 31 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEK--MPKTLQELRV 107 (305)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSS--CCTTCCEEEC
T ss_pred CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCc-Cccc--hhhhhhhhhc
Confidence 345555555555554444445555555555555555555445555555555555555555553 2221 1234555555
Q ss_pred CCCccCCCCCcchhhcCCccceEEecCCccc--ccccccccCCCCCCEEeccCCcCcccCCccccccccccccCCCCccc
Q 048006 565 GKNALYGEIPTWMGESLSNLIVLSLKSNKFH--GKIPFQLCQLAFLQVLDLSLNNISGKIPKCFNNFTAMTQERSSDPTI 642 (833)
Q Consensus 565 ~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~--~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~ 642 (833)
.+|.+. .++...+.....++.++...|... ...+..+..+++|+.+++++|.+.. +|..+
T Consensus 108 ~~n~l~-~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~-l~~~~---------------- 169 (305)
T d1xkua_ 108 HENEIT-KVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGL---------------- 169 (305)
T ss_dssp CSSCCC-BBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSC----------------
T ss_pred cccchh-hhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCccc-cCccc----------------
Confidence 555554 344433334444555555554322 2233345555555555555555542 22111
Q ss_pred ccceEEeeccCcchhccccCcccEEEccCCcCCCCCchhhhcccCCcEEECCCccccccCCcccCCCCCCCEEeCCCCcC
Q 048006 643 KDKLMLTWKGSEREYRSTLGLVKSLELSNNNLNGAVPEEIMDLVGLVALNLSKNHLTGQISPKIGQLKSLDFLDLSRNQL 722 (833)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 722 (833)
+++++.|++++|..++..+..+.+++.+++|++++|.+++..+..+.++++|++|+|++|+|
T Consensus 170 ------------------~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L 231 (305)
T d1xkua_ 170 ------------------PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL 231 (305)
T ss_dssp ------------------CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCC
T ss_pred ------------------CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeecccccc
Confidence 12235555555555555555555555555555555555555555555555555555555555
Q ss_pred cccCCccccCCCCCCEEECcCCcCc
Q 048006 723 VGGIPSSLSQLSGLSVMDLSYNNLS 747 (833)
Q Consensus 723 ~~~~p~~l~~l~~L~~L~ls~N~l~ 747 (833)
+ .+|.++..+++|++|++++|+|+
T Consensus 232 ~-~lp~~l~~l~~L~~L~Ls~N~i~ 255 (305)
T d1xkua_ 232 V-KVPGGLADHKYIQVVYLHNNNIS 255 (305)
T ss_dssp S-SCCTTTTTCSSCCEEECCSSCCC
T ss_pred c-ccccccccccCCCEEECCCCccC
Confidence 5 34455555555555555555554
No 7
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.91 E-value=1.7e-23 Score=217.47 Aligned_cols=269 Identities=22% Similarity=0.267 Sum_probs=208.3
Q ss_pred CcccceEecCCCCcEEEEECCCCCCCCCCcceecCccccCCCCCCEEeCCCCCCCCCCcc-ccccCCCCCCEEEccCCCC
Q 048006 46 CKWTGLRCSNKTNHVILLDLQPIDFDSFPLRGTISPALLKLHDLRHLNLSFNDFSGSPIP-EFIGSLSKLRYLDLFGTVF 124 (833)
Q Consensus 46 c~w~gv~c~~~~~~v~~l~L~~~~~~~~~l~~~~~~~l~~l~~L~~L~Ls~n~~~~~~~p-~~~~~l~~L~~L~Ls~n~l 124 (833)
|.|++|.|.+. +++ .+|+.+. +.+++|+|++|+|+. +| ..|.++++|++|++++|.+
T Consensus 10 c~~~~~~C~~~-----------------~L~-~lP~~l~--~~l~~L~Ls~N~i~~--l~~~~f~~l~~L~~L~l~~n~~ 67 (305)
T d1xkua_ 10 CHLRVVQCSDL-----------------GLE-KVPKDLP--PDTALLDLQNNKITE--IKDGDFKNLKNLHTLILINNKI 67 (305)
T ss_dssp EETTEEECTTS-----------------CCC-SCCCSCC--TTCCEEECCSSCCCC--BCTTTTTTCTTCCEEECCSSCC
T ss_pred ecCCEEEecCC-----------------CCC-ccCCCCC--CCCCEEECcCCcCCC--cChhHhhccccccccccccccc
Confidence 78999999642 232 3455553 579999999999985 55 4799999999999999999
Q ss_pred CCCCCcccCCccccceecccCccCCCCCCcccccCCCCCcEEecCCCCCCCCchhHHhhcCCCCCCEEEccCCCCCCCCC
Q 048006 125 AGPIPPQLGNLSRLQHLDLGSNYLFSTGNLDWLSHLSYLRYLNLDESNLANSSDWFQVIGKLHSLKTLSLHSCYLPPVIP 204 (833)
Q Consensus 125 ~~~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~~l~~l~~L~~L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~ 204 (833)
....|..|.++++|++|++++|++.... . .....++.|++++|.+..+.. ..+.....++.++...+.......
T Consensus 68 ~~i~~~~f~~l~~L~~L~l~~n~l~~l~--~--~~~~~l~~L~~~~n~l~~l~~--~~~~~~~~~~~l~~~~n~~~~~~~ 141 (305)
T d1xkua_ 68 SKISPGAFAPLVKLERLYLSKNQLKELP--E--KMPKTLQELRVHENEITKVRK--SVFNGLNQMIVVELGTNPLKSSGI 141 (305)
T ss_dssp CCBCTTTTTTCTTCCEEECCSSCCSBCC--S--SCCTTCCEEECCSSCCCBBCH--HHHTTCTTCCEEECCSSCCCGGGB
T ss_pred cccchhhhhCCCccCEecccCCccCcCc--c--chhhhhhhhhccccchhhhhh--hhhhccccccccccccccccccCC
Confidence 9877889999999999999999986422 2 234688999999999988643 457778888999988876533221
Q ss_pred ccccccccCCCCCEEEccCCcCCCCCCCcccccccCCcEEEccCccccccccccccCCCCCcEEECcCCccccccccccc
Q 048006 205 LSLNHLNSSTSLETLVLSDNNLTSSIYPWLPNISSIFISIDLGFNQLQGSIPESFQHMVYLEHLRLSFNELEGGIPKFFG 284 (833)
Q Consensus 205 ~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~l~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~ 284 (833)
.. ..+..+++|+.+++++|.++. ++..+ .++ +++|++++|..++..+..|.+++.+++|++++|.+++..+.++.
T Consensus 142 ~~-~~~~~l~~L~~l~l~~n~l~~-l~~~~--~~~-L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~ 216 (305)
T d1xkua_ 142 EN-GAFQGMKKLSYIRIADTNITT-IPQGL--PPS-LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLA 216 (305)
T ss_dssp CT-TGGGGCTTCCEEECCSSCCCS-CCSSC--CTT-CSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGG
T ss_pred Cc-cccccccccCccccccCCccc-cCccc--CCc-cCEEECCCCcCCCCChhHhhcccccccccccccccccccccccc
Confidence 11 233334899999999999874 34433 345 89999999999999999999999999999999999998889999
Q ss_pred CCCCCcEEEccCCCCCchhhHHHhhcCCccccCCccEEEcccccccccChhhhc------CCCCCCEEECcCCccc
Q 048006 285 NMCSLITLNLSNNKLSGQLSEIIQNLSSGCLENSLKSLYLENSLTGVISESFFS------NISNLKELHLANNPLV 354 (833)
Q Consensus 285 ~l~~L~~L~Ls~n~l~~~~~~~l~~l~~~~~~~~L~~L~L~~~~~~~i~~~~~~------~l~~L~~L~L~~n~l~ 354 (833)
++++|++|+|++|+++.. |..+..++ +|++|++++|.++.++...|. .+++|+.|++++|++.
T Consensus 217 ~l~~L~~L~L~~N~L~~l-p~~l~~l~------~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 217 NTPHLRELHLNNNKLVKV-PGGLADHK------YIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp GSTTCCEEECCSSCCSSC-CTTTTTCS------SCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred ccccceeeeccccccccc-cccccccc------CCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCc
Confidence 999999999999999854 55677777 777777777777777655443 3455666666666553
No 8
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.90 E-value=4.1e-24 Score=219.53 Aligned_cols=235 Identities=22% Similarity=0.238 Sum_probs=195.1
Q ss_pred CcccEEEcCCCcCcCCCCCcccCCCCCcEEEccCCcccccCCCCccCcCCccEEEcc-cCcCccccCccccCCCCCcEec
Q 048006 485 SKLTYVDLSSNLLSGKLPDCWWTFDSLVILNLENNSFSGRIPDSMGFLQNIQTLSLH-NNRLTGELSSSFRNCSQLRLLD 563 (833)
Q Consensus 485 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~-~n~l~~~~~~~~~~l~~L~~L~ 563 (833)
+.+++|+|++|+|+...+..|.++++|++|++++|.+....+..+..+..++.+... .+.++...+..|.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 567889999999987777789999999999999999998888888888889988765 5677777788899999999999
Q ss_pred cCCCccCCCCCcchhhcCCccceEEecCCcccccccccccCCCCCCEEeccCCcCcccCCccccccccccccCCCCcccc
Q 048006 564 LGKNALYGEIPTWMGESLSNLIVLSLKSNKFHGKIPFQLCQLAFLQVLDLSLNNISGKIPKCFNNFTAMTQERSSDPTIK 643 (833)
Q Consensus 564 L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~ 643 (833)
+++|.+. .++...+....+|+.+++++|.+++..+..|..+++|+.|++++|++++..+..|.++++|
T Consensus 112 l~~n~~~-~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L----------- 179 (284)
T d1ozna_ 112 LDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSL----------- 179 (284)
T ss_dssp CTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC-----------
T ss_pred cCCcccc-cccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccchhhhcccccc-----------
Confidence 9999987 5555444468899999999999997777888899999999999999988777888777766
Q ss_pred cceEEeeccCcchhccccCcccEEEccCCcCCCCCchhhhcccCCcEEECCCccccccCCcccCCCCCCCEEeCCCCcCc
Q 048006 644 DKLMLTWKGSEREYRSTLGLVKSLELSNNNLNGAVPEEIMDLVGLVALNLSKNHLTGQISPKIGQLKSLDFLDLSRNQLV 723 (833)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 723 (833)
+.+++++|++++..|..|..+++|++|++++|++++..|..|+.+++|+.|+|++|++.
T Consensus 180 ---------------------~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 180 ---------------------DRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp ---------------------CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred ---------------------chhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence 88999999999888999999999999999999999888888999999999999999988
Q ss_pred ccCCccccCCCCCCEEECcCCcCccCCCCc
Q 048006 724 GGIPSSLSQLSGLSVMDLSYNNLSGKIPTV 753 (833)
Q Consensus 724 ~~~p~~l~~l~~L~~L~ls~N~l~g~ip~~ 753 (833)
..-+.. .-...++.+....+++.+..|..
T Consensus 239 C~C~~~-~l~~~l~~~~~~~~~~~C~~p~~ 267 (284)
T d1ozna_ 239 CDCRAR-PLWAWLQKFRGSSSEVPCSLPQR 267 (284)
T ss_dssp CSGGGH-HHHHHHHHCCSEECCCBEEESGG
T ss_pred CCccch-HHHHHHHhCcCCCCceEeCCchH
Confidence 643311 11123556667778888877754
No 9
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=5.7e-23 Score=208.35 Aligned_cols=203 Identities=24% Similarity=0.275 Sum_probs=146.5
Q ss_pred CCCcEEEccCCcccccCCCCccCcCCccEEEcccCcCccccCccccCCCCCcEeccCCCccCCCCCcchhhcCCccceEE
Q 048006 509 DSLVILNLENNSFSGRIPDSMGFLQNIQTLSLHNNRLTGELSSSFRNCSQLRLLDLGKNALYGEIPTWMGESLSNLIVLS 588 (833)
Q Consensus 509 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~ 588 (833)
.++.+++.+++.++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|+++ .+|.. . .+++|++|+
T Consensus 10 ~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~-~l~~~-~-~l~~L~~L~ 83 (266)
T d1p9ag_ 10 ASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-KLQVD-G-TLPVLGTLD 83 (266)
T ss_dssp TTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCC-EEECC-S-CCTTCCEEE
T ss_pred CCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhcccccccccccccccc-ccccc-c-ccccccccc
Confidence 34444555555555 2343332 35666666666666555556666666666666666665 45432 2 466777777
Q ss_pred ecCCcccccccccccCCCCCCEEeccCCcCcccCCccccccccccccCCCCcccccceEEeeccCcchhccccCcccEEE
Q 048006 589 LKSNKFHGKIPFQLCQLAFLQVLDLSLNNISGKIPKCFNNFTAMTQERSSDPTIKDKLMLTWKGSEREYRSTLGLVKSLE 668 (833)
Q Consensus 589 L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ 668 (833)
+++|++++ .+..+..+++|+.|++++|.+.+..+..+..+..+ +.|+
T Consensus 84 Ls~N~l~~-~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l--------------------------------~~L~ 130 (266)
T d1p9ag_ 84 LSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGEL--------------------------------QELY 130 (266)
T ss_dssp CCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTC--------------------------------CEEE
T ss_pred cccccccc-cccccccccccccccccccccceeecccccccccc--------------------------------cccc
Confidence 77777763 45567777888888888888776555555555444 7888
Q ss_pred ccCCcCCCCCchhhhcccCCcEEECCCccccccCCcccCCCCCCCEEeCCCCcCcccCCccccCCCCCCEEECcCCcCcc
Q 048006 669 LSNNNLNGAVPEEIMDLVGLVALNLSKNHLTGQISPKIGQLKSLDFLDLSRNQLVGGIPSSLSQLSGLSVMDLSYNNLSG 748 (833)
Q Consensus 669 Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~g 748 (833)
+++|.+++..+..+..++.|+.|++++|++++..+..|..+++|++|+|++|+|+ .+|+.+..+++|+.|++++|++.+
T Consensus 131 l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~C 209 (266)
T d1p9ag_ 131 LKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (266)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred ccccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCC
Confidence 8888888777777788899999999999999888888999999999999999998 788888889999999999999887
Q ss_pred CCC
Q 048006 749 KIP 751 (833)
Q Consensus 749 ~ip 751 (833)
.+.
T Consensus 210 dC~ 212 (266)
T d1p9ag_ 210 NCE 212 (266)
T ss_dssp SGG
T ss_pred Ccc
Confidence 654
No 10
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.89 E-value=1.9e-22 Score=204.49 Aligned_cols=205 Identities=23% Similarity=0.256 Sum_probs=175.1
Q ss_pred CcCCccEEEcccCcCccccCccccCCCCCcEeccCCCccCCCCCcchhhcCCccceEEecCCcccccccccccCCCCCCE
Q 048006 531 FLQNIQTLSLHNNRLTGELSSSFRNCSQLRLLDLGKNALYGEIPTWMGESLSNLIVLSLKSNKFHGKIPFQLCQLAFLQV 610 (833)
Q Consensus 531 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~ 610 (833)
....+.+.+.+++.++. +|..+. +++++|+|++|+|+ .+|...+..+++|++|+|++|+++. +| .+..+++|++
T Consensus 8 ~~~~~~~v~C~~~~L~~-iP~~lp--~~l~~L~Ls~N~i~-~l~~~~f~~l~~L~~L~L~~N~l~~-l~-~~~~l~~L~~ 81 (266)
T d1p9ag_ 8 KVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLY-TFSLATLMPYTRLTQLNLDRAELTK-LQ-VDGTLPVLGT 81 (266)
T ss_dssp CSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCS-EEEGGGGTTCTTCCEEECTTSCCCE-EE-CCSCCTTCCE
T ss_pred ccCCCeEEEccCCCCCe-eCcCcC--cCCCEEECcCCcCC-CcCHHHhhccccccccccccccccc-cc-cccccccccc
Confidence 45567778999999994 676553 57999999999998 6776655579999999999999984 44 4578999999
Q ss_pred EeccCCcCcccCCccccccccccccCCCCcccccceEEeeccCcchhccccCcccEEEccCCcCCCCCchhhhcccCCcE
Q 048006 611 LDLSLNNISGKIPKCFNNFTAMTQERSSDPTIKDKLMLTWKGSEREYRSTLGLVKSLELSNNNLNGAVPEEIMDLVGLVA 690 (833)
Q Consensus 611 L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~ 690 (833)
|+|++|++++ .+..+..++.| +.|++++|.+.+..+..+..+.++++
T Consensus 82 L~Ls~N~l~~-~~~~~~~l~~L--------------------------------~~L~l~~~~~~~~~~~~~~~l~~l~~ 128 (266)
T d1p9ag_ 82 LDLSHNQLQS-LPLLGQTLPAL--------------------------------TVLDVSFNRLTSLPLGALRGLGELQE 128 (266)
T ss_dssp EECCSSCCSS-CCCCTTTCTTC--------------------------------CEEECCSSCCCCCCSSTTTTCTTCCE
T ss_pred cccccccccc-ccccccccccc--------------------------------ccccccccccceeecccccccccccc
Confidence 9999999974 45556555555 99999999999888888999999999
Q ss_pred EECCCccccccCCcccCCCCCCCEEeCCCCcCcccCCccccCCCCCCEEECcCCcCccCCCCc-cccCccccccccCCCC
Q 048006 691 LNLSKNHLTGQISPKIGQLKSLDFLDLSRNQLVGGIPSSLSQLSGLSVMDLSYNNLSGKIPTV-TQLQSFNDTVYAGNPE 769 (833)
Q Consensus 691 L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N~l~g~ip~~-~~~~~l~~~~~~gn~~ 769 (833)
|++++|.+++..+..+..+++|+.|++++|++++..+..|..+++|++||+++|+|+ .+|.. .....+..+.+.||||
T Consensus 129 L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~ 207 (266)
T d1p9ag_ 129 LYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (266)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred ccccccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCC
Confidence 999999999888888899999999999999999988899999999999999999999 66654 5567778889999999
Q ss_pred CCCCCC
Q 048006 770 LCGLPL 775 (833)
Q Consensus 770 lc~~~~ 775 (833)
.|+|.+
T Consensus 208 ~CdC~~ 213 (266)
T d1p9ag_ 208 LCNCEI 213 (266)
T ss_dssp CCSGGG
T ss_pred CCCcch
Confidence 999863
No 11
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.79 E-value=4.7e-17 Score=172.24 Aligned_cols=54 Identities=22% Similarity=0.253 Sum_probs=41.3
Q ss_pred CCCCEEeCCCCCCCCCCccccccCCCCCCEEEccCCCCCCCCCcccCCccccceecccCccCC
Q 048006 87 HDLRHLNLSFNDFSGSPIPEFIGSLSKLRYLDLFGTVFAGPIPPQLGNLSRLQHLDLGSNYLF 149 (833)
Q Consensus 87 ~~L~~L~Ls~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~~~ 149 (833)
.++++|||++++++ .+|+. .++|++|+|++|+|+ .+|..+ .+|++|++++|.+.
T Consensus 38 ~~l~~LdLs~~~L~--~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~ 91 (353)
T d1jl5a_ 38 RQAHELELNNLGLS--SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK 91 (353)
T ss_dssp HTCSEEECTTSCCS--CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS
T ss_pred cCCCEEEeCCCCCC--CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc
Confidence 36889999999988 47764 568899999999988 677654 46777777777664
No 12
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.79 E-value=5.4e-17 Score=171.75 Aligned_cols=96 Identities=23% Similarity=0.317 Sum_probs=65.5
Q ss_pred cEEEEECCCCCCCCCCcceecCccccCCCCCCEEeCCCCCCCCCCccccccCCCCCCEEEccCCCCCCCCCcccCCcccc
Q 048006 59 HVILLDLQPIDFDSFPLRGTISPALLKLHDLRHLNLSFNDFSGSPIPEFIGSLSKLRYLDLFGTVFAGPIPPQLGNLSRL 138 (833)
Q Consensus 59 ~v~~l~L~~~~~~~~~l~~~~~~~l~~l~~L~~L~Ls~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L 138 (833)
++++|||++ +.++ .+|+. .++|++|+|++|+++ .+|+. +.+|+.|++++|.++ .++. + .+.|
T Consensus 39 ~l~~LdLs~-----~~L~-~lp~~---~~~L~~L~Ls~N~l~--~lp~~---~~~L~~L~l~~n~l~-~l~~-l--p~~L 100 (353)
T d1jl5a_ 39 QAHELELNN-----LGLS-SLPEL---PPHLESLVASCNSLT--ELPEL---PQSLKSLLVDNNNLK-ALSD-L--PPLL 100 (353)
T ss_dssp TCSEEECTT-----SCCS-CCCSC---CTTCSEEECCSSCCS--SCCCC---CTTCCEEECCSSCCS-CCCS-C--CTTC
T ss_pred CCCEEEeCC-----CCCC-CCCCC---CCCCCEEECCCCCCc--ccccc---hhhhhhhhhhhcccc-hhhh-h--cccc
Confidence 467899998 5565 35543 468999999999998 47765 458899999999887 3442 1 1358
Q ss_pred ceecccCccCCCCCCcccccCCCCCcEEecCCCCCCC
Q 048006 139 QHLDLGSNYLFSTGNLDWLSHLSYLRYLNLDESNLAN 175 (833)
Q Consensus 139 ~~L~Ls~n~~~~~~~~~~l~~l~~L~~L~Ls~n~~~~ 175 (833)
++|++++|.+.. .+.++.+++|++|+++++.+..
T Consensus 101 ~~L~L~~n~l~~---lp~~~~l~~L~~L~l~~~~~~~ 134 (353)
T d1jl5a_ 101 EYLGVSNNQLEK---LPELQNSSFLKIIDVDNNSLKK 134 (353)
T ss_dssp CEEECCSSCCSS---CCCCTTCTTCCEEECCSSCCSC
T ss_pred cccccccccccc---ccchhhhccceeeccccccccc
Confidence 888888887743 2234556666666666655544
No 13
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=2.6e-20 Score=205.55 Aligned_cols=60 Identities=23% Similarity=0.248 Sum_probs=29.5
Q ss_pred CcEEEccCcccccc-ccccccCCCCCcEEECcCCcccc----cccccccCCCCCcEEEccCCCCC
Q 048006 241 FISIDLGFNQLQGS-IPESFQHMVYLEHLRLSFNELEG----GIPKFFGNMCSLITLNLSNNKLS 300 (833)
Q Consensus 241 L~~L~Ls~n~l~~~-~p~~~~~l~~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~Ls~n~l~ 300 (833)
|+.||+++|++++. +.+.+..++++++|+|++|.++. .++..+..+++|++|+|++|+++
T Consensus 4 l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~ 68 (460)
T d1z7xw1 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELG 68 (460)
T ss_dssp EEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCH
T ss_pred CCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCC
Confidence 44444444444432 12223445555566666665542 22333455556666666666554
No 14
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=2.4e-21 Score=213.96 Aligned_cols=113 Identities=21% Similarity=0.238 Sum_probs=70.2
Q ss_pred CCCEEeCCCCCCCCCCccccccCCCCCCEEEccCCCCCC----CCCcccCCccccceecccCccCCCCCCc---cccc-C
Q 048006 88 DLRHLNLSFNDFSGSPIPEFIGSLSKLRYLDLFGTVFAG----PIPPQLGNLSRLQHLDLGSNYLFSTGNL---DWLS-H 159 (833)
Q Consensus 88 ~L~~L~Ls~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~Ls~n~~~~~~~~---~~l~-~ 159 (833)
+|++||++++++++..+.+.+..++++++|+|++|.++. .++..+..+++|++|||++|.+...+.. ..+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 467777777777764445556667777777777777652 2334456677777777777765321100 1111 2
Q ss_pred CCCCcEEecCCCCCCCC--chhHHhhcCCCCCCEEEccCCCCC
Q 048006 160 LSYLRYLNLDESNLANS--SDWFQVIGKLHSLKTLSLHSCYLP 200 (833)
Q Consensus 160 l~~L~~L~Ls~n~~~~~--~~~~~~l~~l~~L~~L~Ls~n~l~ 200 (833)
..+|++|++++|.+++. ..++..+..+++|++|++++|.+.
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccccch
Confidence 34677777777777653 234556677777777777777664
No 15
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.75 E-value=1.5e-17 Score=163.70 Aligned_cols=189 Identities=21% Similarity=0.288 Sum_probs=102.4
Q ss_pred ccCCCCCCEEeCCCCCCCCCCccccccCCCCCCEEEccCCCCCCCCCcccCCccccceecccCccCCCCCCcccccCCCC
Q 048006 83 LLKLHDLRHLNLSFNDFSGSPIPEFIGSLSKLRYLDLFGTVFAGPIPPQLGNLSRLQHLDLGSNYLFSTGNLDWLSHLSY 162 (833)
Q Consensus 83 l~~l~~L~~L~Ls~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~~l~~l~~ 162 (833)
+..+++|++|++.+|+++. + +.+..+++|++|++++|.+.+..| +.++++|+++++++|.+. ..+.++++++
T Consensus 37 ~~~l~~L~~L~l~~~~i~~--l-~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~~~n~~~---~i~~l~~l~~ 108 (227)
T d1h6ua2 37 QADLDGITTLSAFGTGVTT--I-EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK---NVSAIAGLQS 108 (227)
T ss_dssp HHHHHTCCEEECTTSCCCC--C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS---CCGGGTTCTT
T ss_pred HHHcCCcCEEECCCCCCCc--c-hhHhcCCCCcEeecCCceeecccc--cccccccccccccccccc---cccccccccc
Confidence 4456667777777777763 4 346677777777777777664332 666777777777776653 3345666666
Q ss_pred CcEEecCCCCCCCCchhHHhhcCCCCCCEEEccCCCCCCCCCccccccccCCCCCEEEccCCcCCCCCCCcccccccCCc
Q 048006 163 LRYLNLDESNLANSSDWFQVIGKLHSLKTLSLHSCYLPPVIPLSLNHLNSSTSLETLVLSDNNLTSSIYPWLPNISSIFI 242 (833)
Q Consensus 163 L~~L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~l~~~L~ 242 (833)
|++++++++...+. ..+...+.++.+.++.+.+....+ ...+++|+.|++++|.+.+. ..+.++++ |+
T Consensus 109 L~~l~l~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~L~~L~l~~n~~~~~--~~l~~l~~-L~ 176 (227)
T d1h6ua2 109 IKTLDLTSTQITDV----TPLAGLSNLQVLYLDLNQITNISP-----LAGLTNLQYLSIGNAQVSDL--TPLANLSK-LT 176 (227)
T ss_dssp CCEEECTTSCCCCC----GGGTTCTTCCEEECCSSCCCCCGG-----GGGCTTCCEEECCSSCCCCC--GGGTTCTT-CC
T ss_pred cccccccccccccc----chhccccchhhhhchhhhhchhhh-----hccccccccccccccccccc--hhhccccc-ce
Confidence 66666666666553 224455666666666665544322 11125555666555555432 12344444 45
Q ss_pred EEEccCccccccccccccCCCCCcEEECcCCcccccccccccCCCCCcEEEcc
Q 048006 243 SIDLGFNQLQGSIPESFQHMVYLEHLRLSFNELEGGIPKFFGNMCSLITLNLS 295 (833)
Q Consensus 243 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 295 (833)
+|++++|++++. + .++++++|++|++++|++++.. .++++++|++|+++
T Consensus 177 ~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~lt~i~--~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 177 TLKADDNKISDI-S-PLASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLT 225 (227)
T ss_dssp EEECCSSCCCCC-G-GGGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEE
T ss_pred ecccCCCccCCC-h-hhcCCCCCCEEECcCCcCCCCc--ccccCCCCCEEEee
Confidence 555555544432 1 2444455555555555444321 14444455554443
No 16
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.74 E-value=3.3e-17 Score=161.19 Aligned_cols=193 Identities=24% Similarity=0.319 Sum_probs=136.6
Q ss_pred CCCCCEEeCCCCCCCCCCccccccCCCCCCEEEccCCCCCCCCCcccCCccccceecccCccCCCCCCcccccCCCCCcE
Q 048006 86 LHDLRHLNLSFNDFSGSPIPEFIGSLSKLRYLDLFGTVFAGPIPPQLGNLSRLQHLDLGSNYLFSTGNLDWLSHLSYLRY 165 (833)
Q Consensus 86 l~~L~~L~Ls~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~~l~~l~~L~~ 165 (833)
++.+..++++.+++++. ..+..+.+|++|++++|.++. ++ .+.++++|++|++++|.+.. ...+.++++|++
T Consensus 18 l~~~~~~~l~~~~~~d~---~~~~~l~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~ls~n~i~~---~~~l~~l~~l~~ 89 (227)
T d1h6ua2 18 LANAIKIAAGKSNVTDT---VTQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD---LAPLKNLTKITE 89 (227)
T ss_dssp HHHHHHHHTTCSSTTSE---ECHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC---CGGGTTCCSCCE
T ss_pred HHHHHHHHhCCCCcCCc---CCHHHcCCcCEEECCCCCCCc-ch-hHhcCCCCcEeecCCceeec---cccccccccccc
Confidence 33444567777877754 245678899999999999984 54 58999999999999998853 445899999999
Q ss_pred EecCCCCCCCCchhHHhhcCCCCCCEEEccCCCCCCCCCccccccccCCCCCEEEccCCcCCCCCCCcccccccCCcEEE
Q 048006 166 LNLDESNLANSSDWFQVIGKLHSLKTLSLHSCYLPPVIPLSLNHLNSSTSLETLVLSDNNLTSSIYPWLPNISSIFISID 245 (833)
Q Consensus 166 L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~l~~~L~~L~ 245 (833)
+++++|.++.+ ..+.++++|+.++++++...+..+ ....+.++.+.++++.+... ..+...++ +++|+
T Consensus 90 l~~~~n~~~~i----~~l~~l~~L~~l~l~~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~--~~~~~~~~-L~~L~ 157 (227)
T d1h6ua2 90 LELSGNPLKNV----SAIAGLQSIKTLDLTSTQITDVTP-----LAGLSNLQVLYLDLNQITNI--SPLAGLTN-LQYLS 157 (227)
T ss_dssp EECCSCCCSCC----GGGTTCTTCCEEECTTSCCCCCGG-----GTTCTTCCEEECCSSCCCCC--GGGGGCTT-CCEEE
T ss_pred ccccccccccc----ccccccccccccccccccccccch-----hccccchhhhhchhhhhchh--hhhccccc-ccccc
Confidence 99999998875 357789999999999888766532 22237778888877776543 23445555 67777
Q ss_pred ccCccccccccccccCCCCCcEEECcCCcccccccccccCCCCCcEEEccCCCCCch
Q 048006 246 LGFNQLQGSIPESFQHMVYLEHLRLSFNELEGGIPKFFGNMCSLITLNLSNNKLSGQ 302 (833)
Q Consensus 246 Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~ 302 (833)
+++|.+++. ..++++++|++|++++|++++. + .++++++|++|++++|++++.
T Consensus 158 l~~n~~~~~--~~l~~l~~L~~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~lt~i 210 (227)
T d1h6ua2 158 IGNAQVSDL--TPLANLSKLTTLKADDNKISDI-S-PLASLPNLIEVHLKNNQISDV 210 (227)
T ss_dssp CCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred ccccccccc--hhhcccccceecccCCCccCCC-h-hhcCCCCCCEEECcCCcCCCC
Confidence 777766643 2366667777777777766642 2 266666677777766666643
No 17
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=2e-17 Score=164.86 Aligned_cols=77 Identities=18% Similarity=0.109 Sum_probs=42.8
Q ss_pred cEEEccCCcCCCCCchhhhcccCCcEE-ECCCccccccCCcccCCCCCCCEEeCCCCcCcccCCccccCCCCCCEEECc
Q 048006 665 KSLELSNNNLNGAVPEEIMDLVGLVAL-NLSKNHLTGQISPKIGQLKSLDFLDLSRNQLVGGIPSSLSQLSGLSVMDLS 742 (833)
Q Consensus 665 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L-~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls 742 (833)
+.|++++|+++. ++.......+++++ ++++|+++...+..|.++++|+.|+|++|+++...+..|.+++.|+++++.
T Consensus 156 ~~L~l~~n~l~~-i~~~~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~~ 233 (242)
T d1xwdc1 156 VILWLNKNGIQE-IHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY 233 (242)
T ss_dssp EEEECCSSCCCE-ECTTTTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSEE
T ss_pred eeeecccccccc-cccccccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcCC
Confidence 556666666653 33333333443333 455666664444456667777777777777765445556666555555543
No 18
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=2.8e-17 Score=163.75 Aligned_cols=200 Identities=19% Similarity=0.163 Sum_probs=102.5
Q ss_pred CcccEEEcCCCcCcCCCCCcccCCCCCcEEEccCCcccccC-CCCccCcCCccEEEccc-CcCccccCccccCCCCCcEe
Q 048006 485 SKLTYVDLSSNLLSGKLPDCWWTFDSLVILNLENNSFSGRI-PDSMGFLQNIQTLSLHN-NRLTGELSSSFRNCSQLRLL 562 (833)
Q Consensus 485 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L 562 (833)
+++++|++++|+++...+..|.++++|++|++++|.+...+ +..|..++.++++.+.. |++....+..|.++++|+++
T Consensus 29 ~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l 108 (242)
T d1xwdc1 29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 108 (242)
T ss_dssp SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEE
T ss_pred CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccccccccccc
Confidence 35666666666665444445666666666666666555432 33455566666665543 45555555556666666666
Q ss_pred ccCCCccCCCCCc-chhhcCCccceEEecCCcccccccccccCCC-CCCEEeccCCcCcccCCccccccccccccCCCCc
Q 048006 563 DLGKNALYGEIPT-WMGESLSNLIVLSLKSNKFHGKIPFQLCQLA-FLQVLDLSLNNISGKIPKCFNNFTAMTQERSSDP 640 (833)
Q Consensus 563 ~L~~n~l~~~~p~-~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~ 640 (833)
++++|++. ..+. .....+..+..+...++.+....+..+.+++ .++.|++++|+++...+..|. ...+
T Consensus 109 ~l~~~~l~-~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~-~~~l-------- 178 (242)
T d1xwdc1 109 LISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFN-GTQL-------- 178 (242)
T ss_dssp EEESCCCC-SCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTTTT-TCCE--------
T ss_pred ccchhhhc-ccccccccccccccccccccccccccccccccccccccceeeeccccccccccccccc-chhh--------
Confidence 66666654 2322 1122334444444555555544444444443 455566666666533222221 1111
Q ss_pred ccccceEEeeccCcchhccccCcccEEEccCCcCCCCCchhhhcccCCcEEECCCccccccCCcccCCCCCCCEEeC
Q 048006 641 TIKDKLMLTWKGSEREYRSTLGLVKSLELSNNNLNGAVPEEIMDLVGLVALNLSKNHLTGQISPKIGQLKSLDFLDL 717 (833)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 717 (833)
.+.+++++|+++...+..|.++++|++|+|++|+|+...+..|.+++.|+.+++
T Consensus 179 -----------------------~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~ 232 (242)
T d1xwdc1 179 -----------------------DELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 232 (242)
T ss_dssp -----------------------EEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTTCCEEESSSE
T ss_pred -----------------------hccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcCCcccccCcC
Confidence 123345555665333344566666666666666666443444555555555444
No 19
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.70 E-value=1e-17 Score=159.75 Aligned_cols=87 Identities=25% Similarity=0.349 Sum_probs=48.2
Q ss_pred cEEEccCCcCCCCCchhhhcccCCcEEECCCccccccCCcccCCCCCCCEEeCCCCcCcccCCccccCCCCCCEEECcCC
Q 048006 665 KSLELSNNNLNGAVPEEIMDLVGLVALNLSKNHLTGQISPKIGQLKSLDFLDLSRNQLVGGIPSSLSQLSGLSVMDLSYN 744 (833)
Q Consensus 665 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~N 744 (833)
+.|+|++|++.+..+..+..+++|++|+|++|+|++..|.+|.++++|++|+|++|+|++..|..|..+++|++|++++|
T Consensus 57 ~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N 136 (192)
T d1w8aa_ 57 VKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136 (192)
T ss_dssp CEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTC
T ss_pred eeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccccCCccccccCHHHhcCCccccccccccc
Confidence 44555555555445555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred cCccCCC
Q 048006 745 NLSGKIP 751 (833)
Q Consensus 745 ~l~g~ip 751 (833)
++.+.++
T Consensus 137 ~~~~~~~ 143 (192)
T d1w8aa_ 137 PFNCNCH 143 (192)
T ss_dssp CBCCSGG
T ss_pred ccccccc
Confidence 5555443
No 20
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.68 E-value=6.4e-17 Score=154.18 Aligned_cols=173 Identities=19% Similarity=0.169 Sum_probs=136.8
Q ss_pred CceecccCcccccCCCCCCCCceeecCCCcccccccccccccCCcccEEEcCCCcCcCCCCCcccCCCCCcEEEccCCcc
Q 048006 442 PGIDISSNHFEGLIPPLPSNSSFLNLSKNRFSGSISFLCSISGSKLTYVDLSSNLLSGKLPDCWWTFDSLVILNLENNSF 521 (833)
Q Consensus 442 ~~l~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 521 (833)
..++.+++.++......+.+++.|++++|++++.++...+..+++|++|++++|.+....+..|..+++|++|+|++|++
T Consensus 11 ~~v~Cs~~~L~~iP~~lp~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l 90 (192)
T d1w8aa_ 11 TTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKI 90 (192)
T ss_dssp TEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCC
T ss_pred CEEEEeCCCcCccCCCCCCCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccc
Confidence 35566666666554445678888999999888777666655678999999999999988889999999999999999999
Q ss_pred cccCCCCccCcCCccEEEcccCcCccccCccccCCCCCcEeccCCCccCCCCCcchhhcCCccceEEecCCccccccccc
Q 048006 522 SGRIPDSMGFLQNIQTLSLHNNRLTGELSSSFRNCSQLRLLDLGKNALYGEIPTWMGESLSNLIVLSLKSNKFHGKIPFQ 601 (833)
Q Consensus 522 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~ 601 (833)
+...+.+|.++++|++|+|++|+|+++.+..|..+++|++|+|++|++....+...+ ...++.+.+..+.+....|..
T Consensus 91 ~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~~~~~--~~~l~~~~l~~~~~~c~~p~~ 168 (192)
T d1w8aa_ 91 KEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWF--AEWLRKKSLNGGAARCGAPSK 168 (192)
T ss_dssp CEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHH--HHHHHHHCCSGGGCBBCSSTT
T ss_pred cccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccchHHH--hhhhhhhcccCCCeEeCCChh
Confidence 988888899999999999999999988888999999999999999998744333222 234666777777777666644
Q ss_pred ccCCCCCCEEeccCCcCc
Q 048006 602 LCQLAFLQVLDLSLNNIS 619 (833)
Q Consensus 602 l~~l~~L~~L~Ls~N~l~ 619 (833)
+..++.++|+.|.+.
T Consensus 169 ---l~~~~l~~L~~n~l~ 183 (192)
T d1w8aa_ 169 ---VRDVQIKDLPHSEFK 183 (192)
T ss_dssp ---TTTSBGGGSCTTTCC
T ss_pred ---hcCCEeeecCHhhCc
Confidence 455667788888775
No 21
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.68 E-value=3.3e-16 Score=151.45 Aligned_cols=165 Identities=24% Similarity=0.317 Sum_probs=90.3
Q ss_pred CCCCCEEeCCCCCCCCCCccccccCCCCCCEEEccCCCCCCCCCcccCCccccceecccCccCCCCCCcccccCCCCCcE
Q 048006 86 LHDLRHLNLSFNDFSGSPIPEFIGSLSKLRYLDLFGTVFAGPIPPQLGNLSRLQHLDLGSNYLFSTGNLDWLSHLSYLRY 165 (833)
Q Consensus 86 l~~L~~L~Ls~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~~l~~l~~L~~ 165 (833)
+..|++|++++|.++.. + .+..+++|++|+|++|.+++ ++ .++.+++|++|++++|.+. .++.+.++++|++
T Consensus 45 L~~L~~L~l~~~~i~~l--~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~---~l~~l~~l~~L~~ 116 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSV--Q-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVK---DLSSLKDLKKLKS 116 (210)
T ss_dssp HHTCCEEECTTSCCCCC--T-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC---CGGGGTTCTTCCE
T ss_pred hcCccEEECcCCCCCCc--h-hHhhCCCCCEEeCCCccccC-cc-ccccCcccccccccccccc---ccccccccccccc
Confidence 34555555555555532 2 24455555555555555543 22 2445555555555555442 1223444444444
Q ss_pred EecCCCCCCCCchhHHhhcCCCCCCEEEccCCCCCCCCCccccccccCCCCCEEEccCCcCCCCCCCcccccccCCcEEE
Q 048006 166 LNLDESNLANSSDWFQVIGKLHSLKTLSLHSCYLPPVIPLSLNHLNSSTSLETLVLSDNNLTSSIYPWLPNISSIFISID 245 (833)
Q Consensus 166 L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~l~~~L~~L~ 245 (833)
|++++|.+... ..+..+ ++++.+++++|.+++ +..+..+++ |+.++
T Consensus 117 L~l~~~~~~~~----~~l~~l---------------------------~~l~~l~~~~n~l~~--~~~~~~l~~-L~~l~ 162 (210)
T d1h6ta2 117 LSLEHNGISDI----NGLVHL---------------------------PQLESLYLGNNKITD--ITVLSRLTK-LDTLS 162 (210)
T ss_dssp EECTTSCCCCC----GGGGGC---------------------------TTCCEEECCSSCCCC--CGGGGGCTT-CSEEE
T ss_pred ccccccccccc----cccccc---------------------------ccccccccccccccc--ccccccccc-ccccc
Confidence 44444444332 123333 555555555555543 223444555 66667
Q ss_pred ccCccccccccccccCCCCCcEEECcCCcccccccccccCCCCCcEEEccC
Q 048006 246 LGFNQLQGSIPESFQHMVYLEHLRLSFNELEGGIPKFFGNMCSLITLNLSN 296 (833)
Q Consensus 246 Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~ 296 (833)
+++|++++.. .+.++++|++|++++|+++. ++ .+..+++|++|+|++
T Consensus 163 l~~n~l~~i~--~l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 163 LEDNQISDIV--PLAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp CCSSCCCCCG--GGTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred cccccccccc--cccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence 7777666432 37778888888888888874 34 478888888888864
No 22
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.68 E-value=4.1e-16 Score=150.75 Aligned_cols=165 Identities=21% Similarity=0.256 Sum_probs=110.3
Q ss_pred CCCCCEEEccCCCCCCCCCcccCCccccceecccCccCCCCCCcccccCCCCCcEEecCCCCCCCCchhHHhhcCCCCCC
Q 048006 111 LSKLRYLDLFGTVFAGPIPPQLGNLSRLQHLDLGSNYLFSTGNLDWLSHLSYLRYLNLDESNLANSSDWFQVIGKLHSLK 190 (833)
Q Consensus 111 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~~l~~l~~L~~L~Ls~n~~~~~~~~~~~l~~l~~L~ 190 (833)
+.+|++|++++|.+.+ ++ .+..+++|++|++++|.+ ++++ .++.+++|+
T Consensus 45 L~~L~~L~l~~~~i~~-l~-~l~~l~~L~~L~L~~n~i-------------------------~~l~----~~~~l~~L~ 93 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKL-------------------------TDIK----PLANLKNLG 93 (210)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCC-------------------------CCCG----GGTTCTTCC
T ss_pred hcCccEEECcCCCCCC-ch-hHhhCCCCCEEeCCCccc-------------------------cCcc----ccccCcccc
Confidence 4556666666666553 22 255555555555555554 3321 234445555
Q ss_pred EEEccCCCCCCCCCccccccccCCCCCEEEccCCcCCCCCCCcccccccCCcEEEccCccccccccccccCCCCCcEEEC
Q 048006 191 TLSLHSCYLPPVIPLSLNHLNSSTSLETLVLSDNNLTSSIYPWLPNISSIFISIDLGFNQLQGSIPESFQHMVYLEHLRL 270 (833)
Q Consensus 191 ~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~l~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 270 (833)
+|++++|++++. | . ...+++|+.|++++|.+.. ...+..++. ++.+++++|.+++. ..+..+++|+++++
T Consensus 94 ~L~l~~n~i~~l-~---~-l~~l~~L~~L~l~~~~~~~--~~~l~~l~~-l~~l~~~~n~l~~~--~~~~~l~~L~~l~l 163 (210)
T d1h6ta2 94 WLFLDENKVKDL-S---S-LKDLKKLKSLSLEHNGISD--INGLVHLPQ-LESLYLGNNKITDI--TVLSRLTKLDTLSL 163 (210)
T ss_dssp EEECCSSCCCCG-G---G-GTTCTTCCEEECTTSCCCC--CGGGGGCTT-CCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred cccccccccccc-c---c-ccccccccccccccccccc--ccccccccc-cccccccccccccc--cccccccccccccc
Confidence 555555544432 1 1 1222666666666666543 245667777 99999999999864 46788999999999
Q ss_pred cCCcccccccccccCCCCCcEEEccCCCCCchhhHHHhhcCCccccCCccEEEccc
Q 048006 271 SFNELEGGIPKFFGNMCSLITLNLSNNKLSGQLSEIIQNLSSGCLENSLKSLYLEN 326 (833)
Q Consensus 271 ~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~~~~~~~L~~L~L~~ 326 (833)
++|++++. + .+.++++|++|++++|+++.. + .+..++ +|+.|+|++
T Consensus 164 ~~n~l~~i-~-~l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~------~L~~L~Ls~ 209 (210)
T d1h6ta2 164 EDNQISDI-V-PLAGLTKLQNLYLSKNHISDL-R-ALAGLK------NLDVLELFS 209 (210)
T ss_dssp CSSCCCCC-G-GGTTCTTCCEEECCSSCCCBC-G-GGTTCT------TCSEEEEEE
T ss_pred cccccccc-c-cccCCCCCCEEECCCCCCCCC-h-hhcCCC------CCCEEEccC
Confidence 99999864 3 388999999999999999864 4 488888 999999854
No 23
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.67 E-value=6.5e-16 Score=148.03 Aligned_cols=162 Identities=22% Similarity=0.342 Sum_probs=91.2
Q ss_pred CCCCCCEEeCCCCCCCCCCccccccCCCCCCEEEccCCCCCCCCCcccCCccccceecccCccCCCCCCcccccCCCCCc
Q 048006 85 KLHDLRHLNLSFNDFSGSPIPEFIGSLSKLRYLDLFGTVFAGPIPPQLGNLSRLQHLDLGSNYLFSTGNLDWLSHLSYLR 164 (833)
Q Consensus 85 ~l~~L~~L~Ls~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~~l~~l~~L~ 164 (833)
.+.++++|+++++.++. + +.+..+++|++|++++|++++..| ++++++|++|++++|.+. ..+.++++++|+
T Consensus 38 ~l~~l~~L~l~~~~i~~--l-~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~n~~~---~~~~l~~l~~L~ 109 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKS--I-DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIA---DITPLANLTNLT 109 (199)
T ss_dssp HHTTCCEEECTTSCCCC--C-TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC---CCGGGTTCTTCS
T ss_pred HhcCCCEEECCCCCCCC--c-cccccCCCcCcCccccccccCccc--ccCCcccccccccccccc---cccccccccccc
Confidence 44556666666666653 2 235556666666666666654222 556666666666665542 222344555555
Q ss_pred EEecCCCCCCCCchhHHhhcCCCCCCEEEccCCCCCCCCCccccccccCCCCCEEEccCCcCCCCCCCcccccccCCcEE
Q 048006 165 YLNLDESNLANSSDWFQVIGKLHSLKTLSLHSCYLPPVIPLSLNHLNSSTSLETLVLSDNNLTSSIYPWLPNISSIFISI 244 (833)
Q Consensus 165 ~L~Ls~n~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~l~~~L~~L 244 (833)
+|+++++..... ..+..+ ++|+.|++++|++.. .+.+...++ ++.|
T Consensus 110 ~L~l~~~~~~~~----~~~~~l---------------------------~~L~~L~l~~n~l~~--~~~l~~~~~-L~~L 155 (199)
T d2omxa2 110 GLTLFNNQITDI----DPLKNL---------------------------TNLNRLELSSNTISD--ISALSGLTS-LQQL 155 (199)
T ss_dssp EEECCSSCCCCC----GGGTTC---------------------------TTCSEEECCSSCCCC--CGGGTTCTT-CSEE
T ss_pred cccccccccccc----cccchh---------------------------hhhHHhhhhhhhhcc--ccccccccc-cccc
Confidence 555555544432 123344 445555555554432 123444444 6666
Q ss_pred EccCccccccccccccCCCCCcEEECcCCcccccccccccCCCCCcEE
Q 048006 245 DLGFNQLQGSIPESFQHMVYLEHLRLSFNELEGGIPKFFGNMCSLITL 292 (833)
Q Consensus 245 ~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 292 (833)
++++|++++. +.++++++|++|++++|++++ ++ .++.+++|++|
T Consensus 156 ~l~~n~l~~l--~~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 156 NFSSNQVTDL--KPLANLTTLERLDISSNKVSD-IS-VLAKLTNLESL 199 (199)
T ss_dssp ECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred ccccccccCC--ccccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCcC
Confidence 6666666643 247788888888888888875 33 47778888775
No 24
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.66 E-value=1.1e-15 Score=146.45 Aligned_cols=177 Identities=22% Similarity=0.311 Sum_probs=115.1
Q ss_pred EeCCCCCCCCCCccccccCCCCCCEEEccCCCCCCCCCcccCCccccceecccCccCCCCCCcccccCCCCCcEEecCCC
Q 048006 92 LNLSFNDFSGSPIPEFIGSLSKLRYLDLFGTVFAGPIPPQLGNLSRLQHLDLGSNYLFSTGNLDWLSHLSYLRYLNLDES 171 (833)
Q Consensus 92 L~Ls~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~~l~~l~~L~~L~Ls~n 171 (833)
+.++.+.+++. + ....+.++++|++++|.+.. ++ .+..+++|++|++++|.+.. ...++++++|++|++++|
T Consensus 23 ~~l~~~~~~~~-~--~~~~l~~l~~L~l~~~~i~~-l~-~l~~l~nL~~L~Ls~N~l~~---~~~l~~l~~L~~L~l~~n 94 (199)
T d2omxa2 23 TVLGKTNVTDT-V--SQTDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTD---ITPLKNLTKLVDILMNNN 94 (199)
T ss_dssp HHTTCSSTTSE-E--CHHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC---CGGGTTCTTCCEEECCSS
T ss_pred HHhCCCCCCCc-c--CHHHhcCCCEEECCCCCCCC-cc-ccccCCCcCcCccccccccC---cccccCCccccccccccc
Confidence 34555555542 1 22345666777777766653 32 35566666666666665532 222445555555555555
Q ss_pred CCCCCchhHHhhcCCCCCCEEEccCCCCCCCCCccccccccCCCCCEEEccCCcCCCCCCCcccccccCCcEEEccCccc
Q 048006 172 NLANSSDWFQVIGKLHSLKTLSLHSCYLPPVIPLSLNHLNSSTSLETLVLSDNNLTSSIYPWLPNISSIFISIDLGFNQL 251 (833)
Q Consensus 172 ~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~l~~~L~~L~Ls~n~l 251 (833)
.+..++ .++++ ++|+.|++++|..... ..+..+++ |+.|++++|++
T Consensus 95 ~~~~~~----~l~~l---------------------------~~L~~L~l~~~~~~~~--~~~~~l~~-L~~L~l~~n~l 140 (199)
T d2omxa2 95 QIADIT----PLANL---------------------------TNLTGLTLFNNQITDI--DPLKNLTN-LNRLELSSNTI 140 (199)
T ss_dssp CCCCCG----GGTTC---------------------------TTCSEEECCSSCCCCC--GGGTTCTT-CSEEECCSSCC
T ss_pred cccccc----ccccc---------------------------cccccccccccccccc--cccchhhh-hHHhhhhhhhh
Confidence 444321 13333 5566666666555432 23566677 99999999999
Q ss_pred cccccccccCCCCCcEEECcCCcccccccccccCCCCCcEEEccCCCCCchhhHHHhhcCCccccCCccEE
Q 048006 252 QGSIPESFQHMVYLEHLRLSFNELEGGIPKFFGNMCSLITLNLSNNKLSGQLSEIIQNLSSGCLENSLKSL 322 (833)
Q Consensus 252 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~~~~~~~L~~L 322 (833)
... +.+..+++|++|++.+|++++.. .++++++|++|++++|++++. + .++.++ +|++|
T Consensus 141 ~~~--~~l~~~~~L~~L~l~~n~l~~l~--~l~~l~~L~~L~ls~N~i~~i-~-~l~~L~------~L~~L 199 (199)
T d2omxa2 141 SDI--SALSGLTSLQQLNFSSNQVTDLK--PLANLTTLERLDISSNKVSDI-S-VLAKLT------NLESL 199 (199)
T ss_dssp CCC--GGGTTCTTCSEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCC-G-GGGGCT------TCSEE
T ss_pred ccc--ccccccccccccccccccccCCc--cccCCCCCCEEECCCCCCCCC-c-cccCCC------CCCcC
Confidence 853 46889999999999999998643 488999999999999999874 3 477887 78775
No 25
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.56 E-value=2.6e-16 Score=159.94 Aligned_cols=195 Identities=23% Similarity=0.268 Sum_probs=91.5
Q ss_pred CCCCEEEccCCCCCCC-CCcccCCccccceecccCccCCCCCCcccccCCCCCcEEecCCCC-CCCCchhHHhhcCCCCC
Q 048006 112 SKLRYLDLFGTVFAGP-IPPQLGNLSRLQHLDLGSNYLFSTGNLDWLSHLSYLRYLNLDESN-LANSSDWFQVIGKLHSL 189 (833)
Q Consensus 112 ~~L~~L~Ls~n~l~~~-~p~~~~~l~~L~~L~Ls~n~~~~~~~~~~l~~l~~L~~L~Ls~n~-~~~~~~~~~~l~~l~~L 189 (833)
.+|++|||+++.+.+. ++..+.++++|++|++++|.+.. ..+..++++++|++|+++++. +++ ..+......+++|
T Consensus 46 ~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~-~~~~~l~~~~~L~~L~Ls~c~~itd-~~l~~l~~~~~~L 123 (284)
T d2astb2 46 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSD-PIVNTLAKNSNLVRLNLSGCSGFSE-FALQTLLSSCSRL 123 (284)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCH-HHHHHHTTCTTCSEEECTTCBSCCH-HHHHHHHHHCTTC
T ss_pred CCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCc-HHHHHHhcCCCCcCccccccccccc-cccchhhHHHHhc
Confidence 3444445444444321 22223444445555554444321 222334444555555554432 221 1222223445555
Q ss_pred CEEEccCCC-CCCC-CCccccccccCCCCCEEEccCC--cCCCCCCCc-ccccccCCcEEEccCc-cccccccccccCCC
Q 048006 190 KTLSLHSCY-LPPV-IPLSLNHLNSSTSLETLVLSDN--NLTSSIYPW-LPNISSIFISIDLGFN-QLQGSIPESFQHMV 263 (833)
Q Consensus 190 ~~L~Ls~n~-l~~~-~~~~~~~~~~~~~L~~L~Ls~n--~l~~~~~~~-l~~l~~~L~~L~Ls~n-~l~~~~p~~~~~l~ 263 (833)
++|++++|. +++. +.. ......++|+.|+++++ .++...... ...+++ |++|++++| .+++.....+..++
T Consensus 124 ~~L~ls~c~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~-L~~L~L~~~~~itd~~~~~l~~~~ 200 (284)
T d2astb2 124 DELNLSWCFDFTEKHVQV--AVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPN-LVHLDLSDSVMLKNDCFQEFFQLN 200 (284)
T ss_dssp CEEECCCCTTCCHHHHHH--HHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTT-CSEEECTTCTTCCGGGGGGGGGCT
T ss_pred cccccccccccccccchh--hhcccccccchhhhccccccccccccccccccccc-ccccccccccCCCchhhhhhcccC
Confidence 555555542 2111 000 11122245566665543 222211111 123444 666666664 35555556677777
Q ss_pred CCcEEECcCC-cccccccccccCCCCCcEEEccCCCCCchhhHHHhhcC
Q 048006 264 YLEHLRLSFN-ELEGGIPKFFGNMCSLITLNLSNNKLSGQLSEIIQNLS 311 (833)
Q Consensus 264 ~L~~L~L~~n-~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~ 311 (833)
+|++|++++| .+++.....++++++|++|+++++--.+.++.....++
T Consensus 201 ~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~~~d~~l~~l~~~lp 249 (284)
T d2astb2 201 YLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALP 249 (284)
T ss_dssp TCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTSSCTTCHHHHHHHST
T ss_pred cCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCCCCHHHHHHHHHhCc
Confidence 7777777774 56655556677777788888777632233333334444
No 26
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=1.7e-15 Score=153.79 Aligned_cols=58 Identities=29% Similarity=0.389 Sum_probs=25.3
Q ss_pred CCCEEeCCCCCCCCCCccccccCCCCCCEEEccCCCCCCCCCcccCCccccceecccC
Q 048006 88 DLRHLNLSFNDFSGSPIPEFIGSLSKLRYLDLFGTVFAGPIPPQLGNLSRLQHLDLGS 145 (833)
Q Consensus 88 ~L~~L~Ls~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 145 (833)
.|++||++++.++...++..+..+++|++|+|++|.+.+..+..+.++++|++|++++
T Consensus 47 ~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~ 104 (284)
T d2astb2 47 RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSG 104 (284)
T ss_dssp CCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTT
T ss_pred CCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccc
Confidence 4444444444443322333344444444444444444433334444444444444444
No 27
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.51 E-value=3.2e-14 Score=123.59 Aligned_cols=104 Identities=27% Similarity=0.292 Sum_probs=66.6
Q ss_pred CEEeCCCCCCCCCCccccccCCCCCCEEEccCCCCCCCCCcccCCccccceecccCccCCCCCCcccccCCCCCcEEecC
Q 048006 90 RHLNLSFNDFSGSPIPEFIGSLSKLRYLDLFGTVFAGPIPPQLGNLSRLQHLDLGSNYLFSTGNLDWLSHLSYLRYLNLD 169 (833)
Q Consensus 90 ~~L~Ls~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~n~~~~~~~~~~l~~l~~L~~L~Ls 169 (833)
|+|+|++|+++. ++ .++.+++|++|++++|.++ .+|..++.+++|++|++++|.+.. .+.++++++|++|+++
T Consensus 1 R~L~Ls~n~l~~--l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~---l~~~~~l~~L~~L~l~ 73 (124)
T d1dcea3 1 RVLHLAHKDLTV--LC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN---VDGVANLPRLQELLLC 73 (124)
T ss_dssp SEEECTTSCCSS--CC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC---CGGGTTCSSCCEEECC
T ss_pred CEEEcCCCCCCC--Cc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccc---cCccccccccCeEECC
Confidence 567777777763 43 3667777777777777776 466667777777777777777643 3446666777777777
Q ss_pred CCCCCCCchhHHhhcCCCCCCEEEccCCCCCC
Q 048006 170 ESNLANSSDWFQVIGKLHSLKTLSLHSCYLPP 201 (833)
Q Consensus 170 ~n~~~~~~~~~~~l~~l~~L~~L~Ls~n~l~~ 201 (833)
+|++++.+.+ ..++.+++|++|++++|.+..
T Consensus 74 ~N~i~~~~~~-~~l~~~~~L~~L~l~~N~i~~ 104 (124)
T d1dcea3 74 NNRLQQSAAI-QPLVSCPRLVLLNLQGNSLCQ 104 (124)
T ss_dssp SSCCCSSSTT-GGGGGCTTCCEEECTTSGGGG
T ss_pred CCccCCCCCc-hhhcCCCCCCEEECCCCcCCc
Confidence 7766655332 345666666666666666543
No 28
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.46 E-value=8.9e-14 Score=120.73 Aligned_cols=120 Identities=26% Similarity=0.315 Sum_probs=99.3
Q ss_pred EEECCCCCCCCCCcceecCccccCCCCCCEEeCCCCCCCCCCccccccCCCCCCEEEccCCCCCCCCCcccCCcccccee
Q 048006 62 LLDLQPIDFDSFPLRGTISPALLKLHDLRHLNLSFNDFSGSPIPEFIGSLSKLRYLDLFGTVFAGPIPPQLGNLSRLQHL 141 (833)
Q Consensus 62 ~l~L~~~~~~~~~l~~~~~~~l~~l~~L~~L~Ls~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 141 (833)
.|+|++ +.++ .++ .+..+++|++|++++|+++ .+|+.++.+++|++|++++|.+++ +| .+.++++|++|
T Consensus 2 ~L~Ls~-----n~l~-~l~-~l~~l~~L~~L~ls~N~l~--~lp~~~~~l~~L~~L~l~~N~i~~-l~-~~~~l~~L~~L 70 (124)
T d1dcea3 2 VLHLAH-----KDLT-VLC-HLEQLLLVTHLDLSHNRLR--ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQEL 70 (124)
T ss_dssp EEECTT-----SCCS-SCC-CGGGGTTCCEEECCSSCCC--CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEE
T ss_pred EEEcCC-----CCCC-CCc-ccccCCCCCEEECCCCccC--cchhhhhhhhcccccccccccccc-cC-ccccccccCeE
Confidence 588888 6665 333 5899999999999999998 478889999999999999999984 55 59999999999
Q ss_pred cccCccCCCCCCcccccCCCCCcEEecCCCCCCCCchhHHh-hcCCCCCCEE
Q 048006 142 DLGSNYLFSTGNLDWLSHLSYLRYLNLDESNLANSSDWFQV-IGKLHSLKTL 192 (833)
Q Consensus 142 ~Ls~n~~~~~~~~~~l~~l~~L~~L~Ls~n~~~~~~~~~~~-l~~l~~L~~L 192 (833)
++++|.+.....+..++.+++|++|++++|.++..+.++.. ...+|+|+.|
T Consensus 71 ~l~~N~i~~~~~~~~l~~~~~L~~L~l~~N~i~~~~~~~~~l~~~lp~L~~L 122 (124)
T d1dcea3 71 LLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122 (124)
T ss_dssp ECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred ECCCCccCCCCCchhhcCCCCCCEEECCCCcCCcCccHHHHHHHHCcCcceE
Confidence 99999998766667889999999999999999776444333 3446777665
No 29
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.43 E-value=5.1e-15 Score=155.44 Aligned_cols=239 Identities=15% Similarity=0.151 Sum_probs=144.9
Q ss_pred CCcccEEEcCCCcCcCC----CCCcccCCCCCcEEEccCCccccc----------CCCCccCcCCccEEEcccCcCccc-
Q 048006 484 GSKLTYVDLSSNLLSGK----LPDCWWTFDSLVILNLENNSFSGR----------IPDSMGFLQNIQTLSLHNNRLTGE- 548 (833)
Q Consensus 484 ~~~L~~L~ls~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----------~~~~~~~l~~L~~L~L~~n~l~~~- 548 (833)
...+++|++++|.+... +...+...++|+.++++++..... +...+..+++|+.|++++|.+...
T Consensus 30 ~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 109 (344)
T d2ca6a1 30 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 109 (344)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccccccc
Confidence 35677777777766432 222345566777777776643311 112234566777777777777643
Q ss_pred ---cCccccCCCCCcEeccCCCccCCCCCcch------------hhcCCccceEEecCCccccc----ccccccCCCCCC
Q 048006 549 ---LSSSFRNCSQLRLLDLGKNALYGEIPTWM------------GESLSNLIVLSLKSNKFHGK----IPFQLCQLAFLQ 609 (833)
Q Consensus 549 ---~~~~~~~l~~L~~L~L~~n~l~~~~p~~~------------~~~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~ 609 (833)
+...+..+++|++|++++|.+...-...+ ....+.|+.+++++|.+... +...+...+.|+
T Consensus 110 ~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~ 189 (344)
T d2ca6a1 110 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLH 189 (344)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCC
T ss_pred ccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhhhhhhc
Confidence 23344566777888887776542111111 12356777888888776522 233345667788
Q ss_pred EEeccCCcCcccCCccccccccccccCCCCcccccceEEeeccCcchhccccCcccEEEccCCcCCCC----Cchhhhcc
Q 048006 610 VLDLSLNNISGKIPKCFNNFTAMTQERSSDPTIKDKLMLTWKGSEREYRSTLGLVKSLELSNNNLNGA----VPEEIMDL 685 (833)
Q Consensus 610 ~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~----~p~~l~~l 685 (833)
.|++++|.+.......+ ........+.|+.|+|++|.++.. +...+..+
T Consensus 190 ~L~L~~n~i~~~g~~~~---------------------------l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~ 242 (344)
T d2ca6a1 190 TVKMVQNGIRPEGIEHL---------------------------LLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSW 242 (344)
T ss_dssp EEECCSSCCCHHHHHHH---------------------------HHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGC
T ss_pred ccccccccccccccccc---------------------------hhhhhcchhhhccccccccccccccccccccccccc
Confidence 88888887753210000 001122345568899999887643 34556778
Q ss_pred cCCcEEECCCccccccCCccc----C--CCCCCCEEeCCCCcCccc----CCcccc-CCCCCCEEECcCCcCccC
Q 048006 686 VGLVALNLSKNHLTGQISPKI----G--QLKSLDFLDLSRNQLVGG----IPSSLS-QLSGLSVMDLSYNNLSGK 749 (833)
Q Consensus 686 ~~L~~L~Ls~N~l~~~~p~~l----~--~l~~L~~L~Ls~N~l~~~----~p~~l~-~l~~L~~L~ls~N~l~g~ 749 (833)
++|++|+|++|.|++.....+ . ..+.|++||+++|+|+.. +...+. +.+.|++|++++|++...
T Consensus 243 ~~L~~L~Ls~n~i~~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~ 317 (344)
T d2ca6a1 243 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 317 (344)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred ccchhhhhhcCccCchhhHHHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCCc
Confidence 889999999999875433333 2 246799999999998753 233342 567899999999998653
No 30
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.43 E-value=1.7e-13 Score=125.36 Aligned_cols=63 Identities=22% Similarity=0.253 Sum_probs=30.2
Q ss_pred ccCCCCCcEeccCCCccCCCCCcchhhcCCccceEEecCCcccccccccccCCCCCCEEeccCCcCc
Q 048006 553 FRNCSQLRLLDLGKNALYGEIPTWMGESLSNLIVLSLKSNKFHGKIPFQLCQLAFLQVLDLSLNNIS 619 (833)
Q Consensus 553 ~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~ 619 (833)
|.++.++++|+|++|+|+ .+|.. +..+++|+.|++++|+++.. + .+..+++|++|++++|+++
T Consensus 14 ~~n~~~lr~L~L~~n~I~-~i~~~-~~~l~~L~~L~Ls~N~i~~l-~-~~~~l~~L~~L~ls~N~i~ 76 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIP-VIENL-GATLDQFDAIDFSDNEIRKL-D-GFPLLRRLKTLLVNNNRIC 76 (162)
T ss_dssp EECTTSCEEEECTTSCCC-SCCCG-GGGTTCCSEEECCSSCCCEE-C-CCCCCSSCCEEECCSSCCC
T ss_pred ccCcCcCcEEECCCCCCC-ccCcc-ccccccCCEEECCCCCCCcc-C-CcccCcchhhhhccccccc
Confidence 344445555555555554 44432 22345555555555555422 1 2444555555555555554
No 31
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=2e-13 Score=124.75 Aligned_cols=125 Identities=22% Similarity=0.220 Sum_probs=90.4
Q ss_pred CCcccEEEcCCCcCcCCCCCcccCCCCCcEEEccCCcccccCCCCccCcCCccEEEcccCcCccccCccccCCCCCcEec
Q 048006 484 GSKLTYVDLSSNLLSGKLPDCWWTFDSLVILNLENNSFSGRIPDSMGFLQNIQTLSLHNNRLTGELSSSFRNCSQLRLLD 563 (833)
Q Consensus 484 ~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 563 (833)
..++++|++++|+|+.. +..+..+++|+.|++++|+++.. +.+..+++|++|++++|+++...+..+..+++|++|+
T Consensus 17 ~~~lr~L~L~~n~I~~i-~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~~L~ 93 (162)
T d1a9na_ 17 AVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 93 (162)
T ss_dssp TTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred cCcCcEEECCCCCCCcc-CccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCccccccccccccce
Confidence 36788888888888744 56667788888888888888754 3477788888888888888866666667788888888
Q ss_pred cCCCccCCCCCc-chhhcCCccceEEecCCcccccc---cccccCCCCCCEEe
Q 048006 564 LGKNALYGEIPT-WMGESLSNLIVLSLKSNKFHGKI---PFQLCQLAFLQVLD 612 (833)
Q Consensus 564 L~~n~l~~~~p~-~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~l~~L~~L~ 612 (833)
+++|++. .++. .....+++|++|++++|+++... +..+..+++|++||
T Consensus 94 L~~N~i~-~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 94 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred ecccccc-ccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 8888886 4543 22235778888888888776322 12456677787776
No 32
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=99.41 E-value=3.1e-14 Score=149.31 Aligned_cols=207 Identities=18% Similarity=0.182 Sum_probs=98.5
Q ss_pred cCccccCCCCCCEEeCCCCCCCCC---CccccccCCCCCCEEEccCCCCCCC---CC-------cccCCccccceecccC
Q 048006 79 ISPALLKLHDLRHLNLSFNDFSGS---PIPEFIGSLSKLRYLDLFGTVFAGP---IP-------PQLGNLSRLQHLDLGS 145 (833)
Q Consensus 79 ~~~~l~~l~~L~~L~Ls~n~~~~~---~~p~~~~~l~~L~~L~Ls~n~l~~~---~p-------~~~~~l~~L~~L~Ls~ 145 (833)
+..++.+.+.|++|+|++|.+... .+...+...++|+.|+++++..... .| ..+..+++|++|+|++
T Consensus 23 l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~ 102 (344)
T d2ca6a1 23 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 102 (344)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccc
Confidence 344567778888888888877542 1334466778888888887654321 11 2233455566666666
Q ss_pred ccCCCCCCc---ccccCCCCCcEEecCCCCCCCCc--hhHHhhcCCCCCCEEEccCCCCCCCCCccccccccCCCCCEEE
Q 048006 146 NYLFSTGNL---DWLSHLSYLRYLNLDESNLANSS--DWFQVIGKLHSLKTLSLHSCYLPPVIPLSLNHLNSSTSLETLV 220 (833)
Q Consensus 146 n~~~~~~~~---~~l~~l~~L~~L~Ls~n~~~~~~--~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~ 220 (833)
|.+...... ..+...++|++|++++|.+.... .+...+..+ ... ......+.|+.++
T Consensus 103 n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~----------------~~~--~~~~~~~~L~~l~ 164 (344)
T d2ca6a1 103 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQEL----------------AVN--KKAKNAPPLRSII 164 (344)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHH----------------HHH--HHHHTCCCCCEEE
T ss_pred cccccccccchhhhhcccccchheeccccccccccccccccccccc----------------ccc--cccccCcccceee
Confidence 655321110 12233444555555544432210 000000000 000 0001124455555
Q ss_pred ccCCcCCCCCC----CcccccccCCcEEEccCcccccc-----ccccccCCCCCcEEECcCCccccc----ccccccCCC
Q 048006 221 LSDNNLTSSIY----PWLPNISSIFISIDLGFNQLQGS-----IPESFQHMVYLEHLRLSFNELEGG----IPKFFGNMC 287 (833)
Q Consensus 221 Ls~n~l~~~~~----~~l~~l~~~L~~L~Ls~n~l~~~-----~p~~~~~l~~L~~L~L~~n~l~~~----~p~~l~~l~ 287 (833)
+++|.+..... ..+..... ++.|++++|.++.. +...+..+++|++|++++|.++.. +...+..++
T Consensus 165 l~~n~i~~~~~~~l~~~l~~~~~-L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~ 243 (344)
T d2ca6a1 165 CGRNRLENGSMKEWAKTFQSHRL-LHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP 243 (344)
T ss_dssp CCSSCCTGGGHHHHHHHHHHCTT-CCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT
T ss_pred cccccccccccccccchhhhhhh-hcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccc
Confidence 55554432111 11222333 55555555555421 223345566666666666665432 233455666
Q ss_pred CCcEEEccCCCCCchhh
Q 048006 288 SLITLNLSNNKLSGQLS 304 (833)
Q Consensus 288 ~L~~L~Ls~n~l~~~~~ 304 (833)
+|++|++++|.+++...
T Consensus 244 ~L~~L~Ls~n~i~~~g~ 260 (344)
T d2ca6a1 244 NLRELGLNDCLLSARGA 260 (344)
T ss_dssp TCCEEECTTCCCCHHHH
T ss_pred cchhhhhhcCccCchhh
Confidence 66677776666665433
No 33
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.38 E-value=6.4e-13 Score=120.54 Aligned_cols=109 Identities=20% Similarity=0.216 Sum_probs=83.9
Q ss_pred cEEEccCCcCCCCCchhhhcccCCcEEECCCcc-ccccCCcccCCCCCCCEEeCCCCcCcccCCccccCCCCCCEEECcC
Q 048006 665 KSLELSNNNLNGAVPEEIMDLVGLVALNLSKNH-LTGQISPKIGQLKSLDFLDLSRNQLVGGIPSSLSQLSGLSVMDLSY 743 (833)
Q Consensus 665 ~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls~ 743 (833)
+.++.+++.+. ..|..+..+++|++|++++|+ ++...+.+|.++++|+.|+|++|+|+...|.+|..+++|++|+|++
T Consensus 11 ~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~ 89 (156)
T d2ifga3 11 SGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (156)
T ss_dssp SCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred CeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccC
Confidence 56788888877 567778888888888887664 7766667788888888888888888877788888888888888888
Q ss_pred CcCccCCCCccccCccccccccCCCCCCCCC
Q 048006 744 NNLSGKIPTVTQLQSFNDTVYAGNPELCGLP 774 (833)
Q Consensus 744 N~l~g~ip~~~~~~~l~~~~~~gn~~lc~~~ 774 (833)
|+|+...+.......+..+.+.|||+.|+|.
T Consensus 90 N~l~~l~~~~~~~~~l~~L~L~~Np~~C~C~ 120 (156)
T d2ifga3 90 NALESLSWKTVQGLSLQELVLSGNPLHCSCA 120 (156)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred CCCcccChhhhccccccccccCCCcccCCch
Confidence 8888544443333456677788888888775
No 34
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.25 E-value=1.9e-13 Score=129.75 Aligned_cols=130 Identities=26% Similarity=0.311 Sum_probs=79.5
Q ss_pred CCcchhhcCCccceEEecCCcccccccccccCCCCCCEEeccCCcCcccCCccccccccccccCCCCcccccceEEeecc
Q 048006 573 IPTWMGESLSNLIVLSLKSNKFHGKIPFQLCQLAFLQVLDLSLNNISGKIPKCFNNFTAMTQERSSDPTIKDKLMLTWKG 652 (833)
Q Consensus 573 ~p~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~l~~~~~~~~~~~~~~~~~ 652 (833)
+|..+. .+++|++|+|++|+++. ++ .+..+++|+.|++++|+++ .+|..+..++
T Consensus 40 l~~sl~-~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~---------------------- 93 (198)
T d1m9la_ 40 MDATLS-TLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD---------------------- 93 (198)
T ss_dssp CHHHHH-HTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHH----------------------
T ss_pred hhhHHh-cccccceeECcccCCCC-cc-cccCCccccChhhcccccc-cccccccccc----------------------
Confidence 333443 46666666666666653 32 3566667777777777665 3333222222
Q ss_pred CcchhccccCcccEEEccCCcCCCCCchhhhcccCCcEEECCCccccccCC-cccCCCCCCCEEeCCCCcCcccCCcc--
Q 048006 653 SEREYRSTLGLVKSLELSNNNLNGAVPEEIMDLVGLVALNLSKNHLTGQIS-PKIGQLKSLDFLDLSRNQLVGGIPSS-- 729 (833)
Q Consensus 653 ~~~~~~~~~~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~-- 729 (833)
.|+.|++++|+++. + +.+..+++|++|++++|+++.... ..+..+++|+.|+|++|++....+..
T Consensus 94 ----------~L~~L~l~~N~i~~-l-~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 161 (198)
T d1m9la_ 94 ----------TLEELWISYNQIAS-L-SGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNA 161 (198)
T ss_dssp ----------HCCEEECSEEECCC-H-HHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTT
T ss_pred ----------cccccccccccccc-c-ccccccccccccccccchhccccccccccCCCccceeecCCCccccCcccccc
Confidence 23777777777763 2 346777778888888887764322 35677778888888888776544332
Q ss_pred --------ccCCCCCCEEE
Q 048006 730 --------LSQLSGLSVMD 740 (833)
Q Consensus 730 --------l~~l~~L~~L~ 740 (833)
+..+++|+.||
T Consensus 162 ~~~~r~~vi~~lp~L~~LD 180 (198)
T d1m9la_ 162 TSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp HHHHHHHHHHHCSSCCEES
T ss_pred hhhHHHHHHHHCCCcCEeC
Confidence 45567777776
No 35
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=2.2e-11 Score=110.16 Aligned_cols=86 Identities=23% Similarity=0.141 Sum_probs=72.8
Q ss_pred ccEEEccCC-cCCCCCchhhhcccCCcEEECCCccccccCCcccCCCCCCCEEeCCCCcCcccCCccccCCCCCCEEECc
Q 048006 664 VKSLELSNN-NLNGAVPEEIMDLVGLVALNLSKNHLTGQISPKIGQLKSLDFLDLSRNQLVGGIPSSLSQLSGLSVMDLS 742 (833)
Q Consensus 664 L~~L~Ls~n-~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ls 742 (833)
+++|++++| .++...+..|.++++|+.|+|++|+|++..|.+|..+++|++|+|++|+|+...+..+..+ .|+.|+|+
T Consensus 33 l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~~-~l~~L~L~ 111 (156)
T d2ifga3 33 LTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGL-SLQELVLS 111 (156)
T ss_dssp CSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSC-CCCEEECC
T ss_pred cCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCcccChhhhccc-cccccccC
Confidence 378888766 4776667789999999999999999998888999999999999999999996555556554 69999999
Q ss_pred CCcCccCC
Q 048006 743 YNNLSGKI 750 (833)
Q Consensus 743 ~N~l~g~i 750 (833)
+|++.+.+
T Consensus 112 ~Np~~C~C 119 (156)
T d2ifga3 112 GNPLHCSC 119 (156)
T ss_dssp SSCCCCCG
T ss_pred CCcccCCc
Confidence 99998755
No 36
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.19 E-value=4.5e-13 Score=127.06 Aligned_cols=132 Identities=23% Similarity=0.269 Sum_probs=68.8
Q ss_pred cccCCCCCcEeccCCCccCCCCCcchhhcCCccceEEecCCcccccccccccCCCCCCEEeccCCcCcccCCcccccccc
Q 048006 552 SFRNCSQLRLLDLGKNALYGEIPTWMGESLSNLIVLSLKSNKFHGKIPFQLCQLAFLQVLDLSLNNISGKIPKCFNNFTA 631 (833)
Q Consensus 552 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 631 (833)
.+..+++|++|++++|+|+ .++. +. .+++|++|++++|.++ .+|.....+++|+.|++++|+++.. ..+..+++
T Consensus 43 sl~~L~~L~~L~Ls~n~I~-~i~~-l~-~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l~~ 116 (198)
T d1m9la_ 43 TLSTLKACKHLALSTNNIE-KISS-LS-GMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL--SGIEKLVN 116 (198)
T ss_dssp HHHHTTTCCEEECSEEEES-CCCC-HH-HHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCCH--HHHHHHHH
T ss_pred HHhcccccceeECcccCCC-Cccc-cc-CCccccChhhcccccc-ccccccccccccccccccccccccc--cccccccc
Confidence 3444455555555555554 3432 22 3455555555555554 2333333334555666666655421 12333333
Q ss_pred ccccCCCCcccccceEEeeccCcchhccccCcccEEEccCCcCCCCCc-hhhhcccCCcEEECCCccccccCCcc-----
Q 048006 632 MTQERSSDPTIKDKLMLTWKGSEREYRSTLGLVKSLELSNNNLNGAVP-EEIMDLVGLVALNLSKNHLTGQISPK----- 705 (833)
Q Consensus 632 L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~----- 705 (833)
| +.|++++|+++.... ..+..+++|+.|+|++|.+....+..
T Consensus 117 L--------------------------------~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~ 164 (198)
T d1m9la_ 117 L--------------------------------RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSE 164 (198)
T ss_dssp S--------------------------------SEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHH
T ss_pred c--------------------------------cccccccchhccccccccccCCCccceeecCCCccccCcccccchhh
Confidence 3 666666666653211 35667777777777777776444332
Q ss_pred -----cCCCCCCCEEeCCCCcCc
Q 048006 706 -----IGQLKSLDFLDLSRNQLV 723 (833)
Q Consensus 706 -----l~~l~~L~~L~Ls~N~l~ 723 (833)
+..+++|+.|| +..++
T Consensus 165 ~r~~vi~~lp~L~~LD--~~~I~ 185 (198)
T d1m9la_ 165 YRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHHHHHCSSCCEES--SGGGT
T ss_pred HHHHHHHHCCCcCEeC--CccCC
Confidence 45677888876 44444
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.24 E-value=3.3e-08 Score=89.47 Aligned_cols=79 Identities=27% Similarity=0.187 Sum_probs=43.6
Q ss_pred CcccEEEccCCcCCCC--CchhhhcccCCcEEECCCccccccCCcccCCCCCCCEEeCCCCcCcccCCc-------cccC
Q 048006 662 GLVKSLELSNNNLNGA--VPEEIMDLVGLVALNLSKNHLTGQISPKIGQLKSLDFLDLSRNQLVGGIPS-------SLSQ 732 (833)
Q Consensus 662 ~~L~~L~Ls~n~l~~~--~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-------~l~~ 732 (833)
+.|++|+|++|+|+.. ++..+..+++|+.|+|++|.|+...+-.+.....|+.|++++|++...... .+..
T Consensus 65 ~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~ 144 (162)
T d1koha1 65 PELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRER 144 (162)
T ss_dssp TTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTT
T ss_pred CCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHHHH
Confidence 3445555555555532 233455666667777777766643332333344567777777776654332 1445
Q ss_pred CCCCCEEE
Q 048006 733 LSGLSVMD 740 (833)
Q Consensus 733 l~~L~~L~ 740 (833)
+|+|++||
T Consensus 145 ~P~L~~LD 152 (162)
T d1koha1 145 FPKLLRLD 152 (162)
T ss_dssp STTCCEET
T ss_pred CCCCCEEC
Confidence 66676665
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.21 E-value=8.7e-08 Score=86.64 Aligned_cols=54 Identities=26% Similarity=0.215 Sum_probs=32.3
Q ss_pred cccEEEccCCcCCCCCchhhhcccCCcEEECCCccccccCCc-------ccCCCCCCCEEe
Q 048006 663 LVKSLELSNNNLNGAVPEEIMDLVGLVALNLSKNHLTGQISP-------KIGQLKSLDFLD 716 (833)
Q Consensus 663 ~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-------~l~~l~~L~~L~ 716 (833)
+|+.|||++|+++...+-.+.....|+.|++++|.+...... .+..+|+|+.||
T Consensus 92 ~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~~~~P~L~~LD 152 (162)
T d1koha1 92 NLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152 (162)
T ss_dssp TCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHHTTSTTCCEET
T ss_pred cccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHHHHCCCCCEEC
Confidence 336667777777643333333445677777777777654432 245677787775
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.56 E-value=1.8e-05 Score=71.22 Aligned_cols=90 Identities=14% Similarity=0.101 Sum_probs=46.0
Q ss_pred CCCCCCEEeCCCC-CCCCCC---ccccccCCCCCCEEEccCCCCCC----CCCcccCCccccceecccCccCCCCCCc--
Q 048006 85 KLHDLRHLNLSFN-DFSGSP---IPEFIGSLSKLRYLDLFGTVFAG----PIPPQLGNLSRLQHLDLGSNYLFSTGNL-- 154 (833)
Q Consensus 85 ~l~~L~~L~Ls~n-~~~~~~---~p~~~~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~Ls~n~~~~~~~~-- 154 (833)
+.++|++|+|+++ .++... +-..+...++|++|+|++|.+.. .+...+...+.|++|+|++|.+...+..
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l 92 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 92 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHH
Confidence 4467777777764 344221 22335566677777777776652 1222334445666666666655321111
Q ss_pred -ccccCCCCCcEEecCCCCCC
Q 048006 155 -DWLSHLSYLRYLNLDESNLA 174 (833)
Q Consensus 155 -~~l~~l~~L~~L~Ls~n~~~ 174 (833)
..+...++|++|++++|.+.
T Consensus 93 ~~aL~~n~sL~~L~l~~n~~~ 113 (167)
T d1pgva_ 93 LRSTLVTQSIVEFKADNQRQS 113 (167)
T ss_dssp HHHTTTTCCCSEEECCCCSSC
T ss_pred HHHHHhCCcCCEEECCCCcCC
Confidence 12344445555555554433
No 40
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=97.54 E-value=2.3e-05 Score=70.60 Aligned_cols=81 Identities=16% Similarity=0.158 Sum_probs=43.1
Q ss_pred cEEEccCCcCCC----CCchhhhcccCCcEEECCCccccccC----CcccCCCCCCCEEeCCCCcCccc-------CCcc
Q 048006 665 KSLELSNNNLNG----AVPEEIMDLVGLVALNLSKNHLTGQI----SPKIGQLKSLDFLDLSRNQLVGG-------IPSS 729 (833)
Q Consensus 665 ~~L~Ls~n~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~----p~~l~~l~~L~~L~Ls~N~l~~~-------~p~~ 729 (833)
++|+|++|.+.. .+...+...+.|++|+|++|.++... -..+...++|++|++++|.+... +...
T Consensus 47 ~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~ 126 (167)
T d1pgva_ 47 EKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMA 126 (167)
T ss_dssp CEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHH
T ss_pred ceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHH
Confidence 444444444432 12233444556666666666665321 12345556677777777655422 2334
Q ss_pred ccCCCCCCEEECcCCc
Q 048006 730 LSQLSGLSVMDLSYNN 745 (833)
Q Consensus 730 l~~l~~L~~L~ls~N~ 745 (833)
+..-++|+.|+++++.
T Consensus 127 L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 127 IEENESLLRVGISFAS 142 (167)
T ss_dssp HHHCSSCCEEECCCCC
T ss_pred HHhCCCccEeeCcCCC
Confidence 4445677777776654
No 41
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.94 E-value=5.4e-05 Score=68.07 Aligned_cols=115 Identities=21% Similarity=0.258 Sum_probs=59.7
Q ss_pred ccCCCCCCEEeCCC-CCCCCCC---ccccccCCCCCCEEEccCCCCCCC----CCcccCCccccceecccCccCCCCCCc
Q 048006 83 LLKLHDLRHLNLSF-NDFSGSP---IPEFIGSLSKLRYLDLFGTVFAGP----IPPQLGNLSRLQHLDLGSNYLFSTGNL 154 (833)
Q Consensus 83 l~~l~~L~~L~Ls~-n~~~~~~---~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~~~~l~~L~~L~Ls~n~~~~~~~~ 154 (833)
..+.+.|++|+|++ +.++... +-..+...++|++|+|++|.+... +-..+...+.++.+++++|.+...+..
T Consensus 13 ~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~ 92 (166)
T d1io0a_ 13 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 92 (166)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHH
Confidence 34557788888876 3454321 223345677777788877776532 122334556677777776665321111
Q ss_pred ---ccccCCCCCcEEecC--CCCCCCC--chhHHhhcCCCCCCEEEccCC
Q 048006 155 ---DWLSHLSYLRYLNLD--ESNLANS--SDWFQVIGKLHSLKTLSLHSC 197 (833)
Q Consensus 155 ---~~l~~l~~L~~L~Ls--~n~~~~~--~~~~~~l~~l~~L~~L~Ls~n 197 (833)
..+...++|+.++|+ +|.+... ..+...+...++|++|+++.+
T Consensus 93 ~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~ 142 (166)
T d1io0a_ 93 ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFT 142 (166)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCS
T ss_pred HHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCC
Confidence 234455556554443 3344321 223344455555555555443
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.76 E-value=0.0003 Score=62.92 Aligned_cols=45 Identities=7% Similarity=0.053 Sum_probs=25.2
Q ss_pred cCCCCCcEEECcC-Cccccc----ccccccCCCCCcEEEccCCCCCchhh
Q 048006 260 QHMVYLEHLRLSF-NELEGG----IPKFFGNMCSLITLNLSNNKLSGQLS 304 (833)
Q Consensus 260 ~~l~~L~~L~L~~-n~l~~~----~p~~l~~l~~L~~L~Ls~n~l~~~~~ 304 (833)
.+.+.|++|++++ +.++.. +...+...++|++|++++|.++....
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~ 63 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVA 63 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHH
T ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHH
Confidence 3456666777665 344421 22334456667777777776655433
Done!