BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048009
(531 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4DGK|A Chain A, Crystal Structure Of Phytoene Desaturase Crti From Pantoea
Ananatis
Length = 501
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 129/536 (24%), Positives = 213/536 (39%), Gaps = 81/536 (15%)
Query: 22 VIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSL 81
VIG G GL A L AG+ V +LE+R GG A E GF F + + PS
Sbjct: 6 VIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYE-DQGFTFDAGPTV--ITDPSA 62
Query: 82 IK-CGTRIGETWNEVVEAKSII-VYAIFEDQLDKFSQFVDLLFDSSPPELLQGSSSYSHQ 139
I+ G+ E VE + Y + + F+ +D+ L ++ +
Sbjct: 63 IEELFALAGKQLKEYVELLPVTPFYRLCWESGKVFN------YDNDQTRLEAQIQQFNPR 116
Query: 140 FKNKIRNSAFWAHCLRRA--ISLGQKDLVEFVDLL-LSPASKVLNKWFETDVLKATLATD 196
R ++ + + + LG + F D+L +P L W A+ D
Sbjct: 117 DVEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIED 176
Query: 197 AVIGTMSSVHT---------PGSGYVLLHHVMGETDGNPGIWSYVEGGMGSVSMAIGSAA 247
+ S H+ S Y L+H + E G+W + GG G++ +
Sbjct: 177 EHLRQAFSFHSLLVGGNPFATSSIYTLIHALEREW----GVW-FPRGGTGALVQGMIKLF 231
Query: 248 REAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLV---PGN 304
++ G +V A VS M ++ V L DG + + V SNA T+ DL+ P
Sbjct: 232 QDLGGEVVLNARVSH-METTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAA 290
Query: 305 ILPDDFILSIKHSD-YSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEE 363
+ + + + + S+ +N D+L C GP++ E ++E
Sbjct: 291 VKQSNKLQTKRMSNSLFVLYFGLNHHHDQLAHHTVCF------GPRY-------RELIDE 337
Query: 364 I--HSACQEAVNGLPSRRPIIEMTIPSVLDKTISPPGNHVINLFIQYTPYKPSDGSWM-- 419
I H E + + + P V D +++P G + ++ W
Sbjct: 338 IFNHDGLAEDFS--------LYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTANLDWTVE 389
Query: 420 DPAYRDSFANRCFSLIDE-YAPGFSSSIIGYDMLTPPDLEREIGLTGGNIFHGAMGLDSL 478
P RD R F+ +++ Y PG S ++ + M TP D ++ N +HG S
Sbjct: 390 GPKLRD----RIFAYLEQHYMPGLRSQLVTHRMFTPFDFRDQL-----NAYHG-----SA 435
Query: 479 FLMRPVKGWSNYRTP------LQGLYMCGSGTHPGGGVMGAPG--RNAAGIVLQDL 526
F + PV S + P + LY+ G+GTHPG G+ G G + AG++L+DL
Sbjct: 436 FSVEPVLTQSAWFRPHNRDKTITNLYLVGAGTHPGAGIPGVIGSAKATAGLMLEDL 491
>pdb|3RHA|A Chain A, The Crystal Structure Of Oxidoreductase From
Arthrobacter Aurescens
pdb|3RHA|B Chain B, The Crystal Structure Of Oxidoreductase From
Arthrobacter Aurescens
Length = 482
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEEL 61
D +++G G +GLTAA L +AGLSVAVLE R +GG T+ +
Sbjct: 9 DVVIVGAGPSGLTAARELKKAGLSVAVLEARDRVGGRTWTDTI 51
>pdb|2CVJ|A Chain A, Crystal Structure Of Thioredoxin Reductase-Related
Protein Ttha0370 From Thermus Thermophilus Hb8
pdb|2YWL|A Chain A, Crystal Structure Of Thioredoxin Reductase-Related
Protein Ttha0370 From Thermus Thermophilus Hb8
pdb|2YWL|B Chain B, Crystal Structure Of Thioredoxin Reductase-Related
Protein Ttha0370 From Thermus Thermophilus Hb8
Length = 180
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLE 47
WD +V+GGG +GL+AA +LARAGL V VL+
Sbjct: 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLD 31
>pdb|2VVM|A Chain A, The Structure Of Mao-N-D5, A Variant Of Monoamine
Oxidase From Aspergillus Niger.
pdb|2VVM|B Chain B, The Structure Of Mao-N-D5, A Variant Of Monoamine
Oxidase From Aspergillus Niger
Length = 495
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 14 KEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGG 54
K+ WD +VIGGG+ GLTA L AG +LE R IGG
Sbjct: 36 KDGPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGG 76
>pdb|2VVL|A Chain A, The Structure Of Mao-N-D3, A Variant Of Monoamine
Oxidase From Aspergillus Niger.
pdb|2VVL|B Chain B, The Structure Of Mao-N-D3, A Variant Of Monoamine
Oxidase From Aspergillus Niger.
pdb|2VVL|C Chain C, The Structure Of Mao-N-D3, A Variant Of Monoamine
Oxidase From Aspergillus Niger.
pdb|2VVL|D Chain D, The Structure Of Mao-N-D3, A Variant Of Monoamine
Oxidase From Aspergillus Niger.
pdb|2VVL|E Chain E, The Structure Of Mao-N-D3, A Variant Of Monoamine
Oxidase From Aspergillus Niger.
pdb|2VVL|F Chain F, The Structure Of Mao-N-D3, A Variant Of Monoamine
Oxidase From Aspergillus Niger.
pdb|2VVL|H Chain H, The Structure Of Mao-N-D3, A Variant Of Monoamine
Oxidase From Aspergillus Niger
Length = 495
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 14 KEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGG 54
K+ WD +VIGGG+ GLTA L AG +LE R IGG
Sbjct: 36 KDGPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGG 76
>pdb|2VVL|G Chain G, The Structure Of Mao-N-D3, A Variant Of Monoamine
Oxidase From Aspergillus Niger
Length = 495
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 14 KEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGG 54
K+ WD +VIGGG+ GLTA L AG +LE R IGG
Sbjct: 36 KDGPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGG 76
>pdb|2Q7V|A Chain A, Crystal Structure Of Deinococcus Radiodurans Thioredoxin
Reductase
pdb|2Q7V|B Chain B, Crystal Structure Of Deinococcus Radiodurans Thioredoxin
Reductase
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEEL--IPGF 65
+D ++IGGG GLTAA Y RA LS +LE+ G A +EE+ PGF
Sbjct: 9 YDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQIAWSEEVENFPGF 58
>pdb|2BXR|A Chain A, Human Monoamine Oxidase A In Complex With Clorgyline,
Crystal Form A
pdb|2BXR|B Chain B, Human Monoamine Oxidase A In Complex With Clorgyline,
Crystal Form A
pdb|2BXS|A Chain A, Human Monoamine Oxidase A In Complex With Clorgyline,
Crystal Form B
pdb|2BXS|B Chain B, Human Monoamine Oxidase A In Complex With Clorgyline,
Crystal Form B
Length = 527
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58
+D +VIGGG +GL+AA L G+SV VLE R +GG T
Sbjct: 14 FDVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGGRTYT 54
>pdb|2Z5Y|A Chain A, Crystal Structure Of Human Monoamine Oxidase A (G110a)
With Harmine
Length = 513
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58
+D +VIGGG +GL+AA L G+SV VLE R +GG T
Sbjct: 3 FDVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGGRTYT 43
>pdb|2Z5X|A Chain A, Crystal Structure Of Human Monoamine Oxidase A With
Harmine
Length = 513
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58
+D +VIGGG +GL+AA L G+SV VLE R +GG T
Sbjct: 3 FDVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGGRTYT 43
>pdb|2YG7|A Chain A, Structure-Based Redesign Of Cofactor Binding In
Putrescine Oxidase: A394c-A396t-Q431g Triple Mutant
pdb|2YG7|B Chain B, Structure-Based Redesign Of Cofactor Binding In
Putrescine Oxidase: A394c-A396t-Q431g Triple Mutant
Length = 453
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEEL 61
D ++G G +GL AA L +AGLSVAV+E R +GG T+ +
Sbjct: 7 DVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTI 49
>pdb|2YG5|A Chain A, Structure-Based Redesign Of Cofactor Binding In
Putrescine Oxidase: A394c Mutant
Length = 453
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEEL 61
D ++G G +GL AA L +AGLSVAV+E R +GG T+ +
Sbjct: 7 DVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTI 49
>pdb|2YG3|A Chain A, Structure-Based Redesign Of Cofactor Binding In
Putrescine Oxidase: Wild Type Enzyme
pdb|2YG3|B Chain B, Structure-Based Redesign Of Cofactor Binding In
Putrescine Oxidase: Wild Type Enzyme
pdb|2YG4|A Chain A, Structure-Based Redesign Of Cofactor Binding In
Putrescine Oxidase: Wild Type Bound To Putrescine
pdb|2YG4|B Chain B, Structure-Based Redesign Of Cofactor Binding In
Putrescine Oxidase: Wild Type Bound To Putrescine
Length = 453
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEEL 61
D ++G G +GL AA L +AGLSVAV+E R +GG T+ +
Sbjct: 7 DVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTI 49
>pdb|2YG6|A Chain A, Structure-Based Redesign Of Cofactor Binding In
Putrescine Oxidase: P15i-A394c Double Mutant
pdb|2YG6|B Chain B, Structure-Based Redesign Of Cofactor Binding In
Putrescine Oxidase: P15i-A394c Double Mutant
Length = 453
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEEL 61
D ++G G +GL AA L +AGLSVAV+E R +GG T+ +
Sbjct: 7 DVAIVGAGISGLAAATALRKAGLSVAVIEARDRVGGRTWTDTI 49
>pdb|1JEH|A Chain A, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1JEH|B Chain B, Crystal Structure Of Yeast E3, Lipoamide Dehydrogenase
pdb|1V59|A Chain A, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
pdb|1V59|B Chain B, Crystal Structure Of Yeast Lipoamide Dehydrogenase
Complexed With Nad+
Length = 478
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQS 75
K D ++IGGG G AA A+ G + A +E+R +GG + IP S+L
Sbjct: 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFH 63
Query: 76 LLRPSLIKCGTRIGETWNEVVEAKSIIVYAIFEDQLDKFSQFVDLLFDSSPPELLQGSSS 135
+ K G + N ++ +D + + + ++LLF + +G+ S
Sbjct: 64 QMHTEAQKRGIDV----NGDIKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGS 119
Query: 136 YSHQFKNKI 144
+ + K ++
Sbjct: 120 FEDETKIRV 128
>pdb|3K7M|X Chain X, Crystal Structure Of 6-Hydroxy-L-Nicotine Oxidase From
Arthrobacter Nicotinovorans
pdb|3K7Q|X Chain X, Crystal Structure Of Substrate-Bound
6-Hydroxy-L-Nicotine Oxidase From Arthrobacter
Nicotinovorans
pdb|3NG7|X Chain X, Complex Of Dithionite-Reduced 6-Hydroxy-L-Nicotine
Oxidase With Substrate Bound At Active Site And
Inhibitor At Exit Cavity
pdb|3NGC|X Chain X, Complex Of 6-Hydroxy-L-Nicotine Oxidase With
Intermediate Methylmyosmine Product Formed During
Catalytic Turnover
pdb|3NH3|X Chain X, Complex Of 6-Hydroxy-L-Nicotine Oxidase With Final
Ketone Product Formed During Catalytic Turnover
pdb|3NHO|X Chain X, Complex Of 6-Hydroxy-L-Nicotine Oxidase With Product
Bound At Active Site
pdb|3NK0|X Chain X, Complex Of 6-Hydroxy-L-Nicotine Oxidase With Inhibitor
Bound At Active Site And Turnover Product At Exit
Cavity
pdb|3NK1|X Chain X, Complex Of 6-Hydroxy-L-Nicotine Oxidase With Serotonin
pdb|3NK2|X Chain X, Complex Of 6-Hydroxy-L-Nicotine Oxidase With Dopamine
pdb|3NN6|X Chain X, Crystal Structure Of Inhibitor-Bound In Active Centre
6-Hydroxy-L- Nicotine Oxidase From Arthrobacter
Nicotinovorans
pdb|3NN0|X Chain X, Complex Of 6-Hydroxy-L-Nicotine Oxidase With
Nicotinamide
Length = 431
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEEL--IPGFKFS-RCSYLQ 74
+DA+V+GGG +GL AA L AG V +LE +GG A + E +PG + +YL
Sbjct: 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLH 61
Query: 75 SLLRPSLIKCGTRIG 89
P L R G
Sbjct: 62 RKHHPRLAAELDRYG 76
>pdb|3K7T|A Chain A, Crystal Structure Of Apo-Form 6-Hydroxy-L-Nicotine
Oxidase, Crystal Form P3121
pdb|3K7T|B Chain B, Crystal Structure Of Apo-Form 6-Hydroxy-L-Nicotine
Oxidase, Crystal Form P3121
Length = 425
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEEL--IPGFKFS-RCSYLQ 74
+DA+V+GGG +GL AA L AG V +LE +GG A + E +PG + +YL
Sbjct: 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLH 61
Query: 75 SLLRPSLIKCGTRIG 89
P L R G
Sbjct: 62 RKHHPRLAAELDRYG 76
>pdb|3HDQ|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|I Chain I, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDQ|J Chain J, Crystal Structure Of Udp-Galactopyranose Mutase
(Oxidized Form) In Complex With Substrate
pdb|3HDY|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|I Chain I, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HDY|J Chain J, Crystal Structure Of Udp-Galactopyranose Mutase (Reduced
Form) In Complex With Substrate
pdb|3HE3|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|I Chain I, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3HE3|J Chain J, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Udp
pdb|3MJ4|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|I Chain I, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
pdb|3MJ4|J Chain J, Crystal Structure Of Udp-Galactopyranose Mutase In
Complex With Phosphonate Analog Of Udp-Galactopyranose
Length = 397
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 3 RRSFTSTTSALKEKK-WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAA 56
R T+TT+ +E K +D L++G G G A LA +G V +++RR IGG A
Sbjct: 14 RTEQTNTTNEQQESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNA 68
>pdb|3K30|A Chain A, Histamine Dehydrogenase From Nocardiodes Simplex
pdb|3K30|B Chain B, Histamine Dehydrogenase From Nocardiodes Simplex
Length = 690
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 2 WRRSFTSTTSALKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEEL 61
WRR + KE LV+G G +GL AA L G V + E +GG E
Sbjct: 376 WRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESA 435
Query: 62 IPGF 65
+PG
Sbjct: 436 LPGL 439
>pdb|1O5W|A Chain A, The Structure Basis Of Specific Recognitions For
Substrates And Inhibitors Of Rat Monoamine Oxidase A
pdb|1O5W|B Chain B, The Structure Basis Of Specific Recognitions For
Substrates And Inhibitors Of Rat Monoamine Oxidase A
pdb|1O5W|C Chain C, The Structure Basis Of Specific Recognitions For
Substrates And Inhibitors Of Rat Monoamine Oxidase A
pdb|1O5W|D Chain D, The Structure Basis Of Specific Recognitions For
Substrates And Inhibitors Of Rat Monoamine Oxidase A
Length = 534
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58
+D +VIGGG +GL AA L+ ++V VLE R +GG T
Sbjct: 22 FDVVVIGGGISGLAAAKLLSEYKINVLVLEARDRVGGRTYT 62
>pdb|4A9W|A Chain A, Flavin-Containing Monooxygenase From Stenotrophomonas
Maltophilia
pdb|4A9W|B Chain B, Flavin-Containing Monooxygenase From Stenotrophomonas
Maltophilia
Length = 357
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGA 55
D +VIGGG +GL+A +L R+GLS +L+ GGA
Sbjct: 5 DVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGA 41
>pdb|3IHG|A Chain A, Crystal Structure Of A Ternary Complex Of Aklavinone-11
Hydroxylase With Fad And Aklavinone
pdb|3IHG|B Chain B, Crystal Structure Of A Ternary Complex Of Aklavinone-11
Hydroxylase With Fad And Aklavinone
pdb|3IHG|C Chain C, Crystal Structure Of A Ternary Complex Of Aklavinone-11
Hydroxylase With Fad And Aklavinone
Length = 535
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 13 LKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERR 49
+ + + D LV+G G GL+ A +LAR G+ V V+ERR
Sbjct: 1 MNDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERR 37
>pdb|3ATQ|A Chain A, Geranylgeranyl Reductase (Ggr) From Sulfolobus
Acidocaldarius
pdb|3ATR|A Chain A, Geranylgeranyl Reductase (Ggr) From Sulfolobus
Acidocaldarius Co- Crystallized With Its Ligand
Length = 453
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 13 LKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERR 49
+KE K+D L+IGGG G +AA L+R GL + +++ +
Sbjct: 2 MKELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSK 38
>pdb|1MO9|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MO9|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MOK|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|C Chain C, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|D Chain D, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|2C3D|A Chain A, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3D|B Chain B, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3C|A Chain A, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|2C3C|B Chain B, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|3Q6J|A Chain A, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
pdb|3Q6J|B Chain B, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
Length = 523
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQS 75
+++DA+ IGGG G +AYL G +++R +GG+ +P FS C+
Sbjct: 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELM 101
Query: 76 LLR 78
L R
Sbjct: 102 LAR 104
>pdb|1I8T|A Chain A, Strcuture Of Udp-Galactopyranose Mutase From E.Coli
pdb|1I8T|B Chain B, Strcuture Of Udp-Galactopyranose Mutase From E.Coli
Length = 367
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEE 60
+D +++G G G A L + V V+E+R+ IGG A TE+
Sbjct: 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTED 44
>pdb|2XAF|A Chain A, Crystal Structure Of Lsd1-Corest In Complex With
Para-Bromo- (+)-Cis-2-Phenylcyclopropyl-1-Amine
pdb|2XAG|A Chain A, Crystal Structure Of Lsd1-Corest In Complex With
Para-Bromo- (-)-Trans-2-Phenylcyclopropyl-1-Amine
pdb|2XAH|A Chain A, Crystal Structure Of Lsd1-Corest In Complex With (+)-
Trans-2-Phenylcyclopropyl-1-Amine
pdb|2XAJ|A Chain A, Crystal Structure Of Lsd1-Corest In Complex With
(-)-Trans- 2-Phenylcyclopropyl-1-Amine
pdb|2XAQ|A Chain A, Crystal Structure Of Lsd1-Corest In Complex With A
Tranylcypromine Derivative (Mc2584, 13b)
pdb|2XAS|A Chain A, Crystal Structure Of Lsd1-Corest In Complex With A
Tranylcypromine Derivative (Mc2580, 14e)
Length = 852
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 19/151 (12%)
Query: 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQ 74
+K ++IG G +GL AA L G+ V +LE R +GG T F + +Y+
Sbjct: 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT--------FRKGNYVA 327
Query: 75 SLLRPSLIKCGTRIGETWNEVVE---AKSIIVYAIFEDQLDKFSQFVDLLFDSSPPELLQ 131
L + G ++ V AK ++E + D + + LL+
Sbjct: 328 DLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLE 387
Query: 132 GSSSYSHQFKNKIRNSAFWAHCLRRAISLGQ 162
+S SHQ + N+ + +SLGQ
Sbjct: 388 ATSYLSHQLDFNVLNN--------KPVSLGQ 410
>pdb|3E1T|A Chain A, Structure And Action Of The Myxobacterial Chondrochloren
Halogenase Cndh, A New Variant Of Fad-Dependent
Halogenases
Length = 512
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 9/60 (15%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLER----RHVIGGAAVTEELIPGFKFSRCSYL 73
+D +VIGGG G T A+++A G V +LER RH IG E L+P C+ L
Sbjct: 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIG-----ESLLPATVHGICAML 62
>pdb|2GAG|B Chain B, Heteroteterameric Sarcosine: Structure Of A Diflavin
Metaloenzyme At 1.85 A Resolution
Length = 405
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 15 EKKWDALVIGGGHNGLTAAAYLARA-GLS-VAVLERRHVIGG 54
+K +DA+++GGG +GL A +LA+ G++ VAVLE+ + GG
Sbjct: 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGG 60
>pdb|1GRT|A Chain A, Human Glutathione Reductase A34eR37W MUTANT
Length = 478
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIP 63
+D LVIGGG GL +A A G AV+E H +GG V +P
Sbjct: 21 YDYLVIGGGSGGLESAWRAAELGARAAVVE-SHKLGGTCVNVGCVP 65
>pdb|2GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Glutathione Complex
pdb|3GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Oxidized
Trypanothione Complex
pdb|4GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant, Mixed
Disulfide Between Trypanothione And The Enzyme
pdb|5GRT|A Chain A, Human Glutathione Reductase A34e, R37w Mutant,
Glutathionylspermidine Complex
Length = 461
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIP 63
+D LVIGGG GL +A A G AV+E H +GG V +P
Sbjct: 4 YDYLVIGGGSGGLESAWRAAELGARAAVVE-SHKLGGTCVNVGCVP 48
>pdb|2GAH|B Chain B, Heterotetrameric Sarcosine: Structure Of A Diflavin
Metaloenzyme At 1.85 A Resolution
Length = 405
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 15 EKKWDALVIGGGHNGLTAAAYLARA-GLS-VAVLERRHVIGG 54
+K +DA+++GGG +GL A +LA+ G++ VAVLE+ + GG
Sbjct: 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGG 60
>pdb|2EQ7|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From
Thermus Thermophilus Hb8 With Psbdo
pdb|2EQ7|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From
Thermus Thermophilus Hb8 With Psbdo
pdb|2YQU|A Chain A, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
pdb|2YQU|B Chain B, Crystal Structures And Evolutionary Relationship Of Two
Different Lipoamide Dehydrogenase(e3s) From Thermus
Thermophilus
Length = 455
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIP 63
+D LVIG G G AA A+ G+ V V+E+ +GG + IP
Sbjct: 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIP 47
>pdb|4E0V|A Chain A, Structure Of L-Amino Acid Oxidase From The B.
Jararacussu Venom
pdb|4E0V|B Chain B, Structure Of L-Amino Acid Oxidase From The B.
Jararacussu Venom
Length = 497
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 8 STTSALKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58
STTS K +++G G +GL+AA LA AG V VLE GG T
Sbjct: 41 STTSNPKR----VVIVGAGMSGLSAAYVLANAGHQVTVLEASERAGGQVKT 87
>pdb|3KA7|A Chain A, Crystal Structure Of An Oxidoreductase From
Methanosarcina Mazei. Northeast Structural Genomics
Consortium Target Id Mar208
Length = 425
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 21 LVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSY 72
+VIG G GL +AA L++AG V V ER + GG T GF+ S ++
Sbjct: 4 VVIGAGLGGLLSAARLSKAGHEVEVFERLPITGG-RFTNLSYKGFQLSSGAF 54
>pdb|2AN1|A Chain A, Structural Genomics, The Crystal Structure Of A Putative
Kinase From Salmonella Typhimurim Lt2
pdb|2AN1|B Chain B, Structural Genomics, The Crystal Structure Of A Putative
Kinase From Salmonella Typhimurim Lt2
pdb|2AN1|C Chain C, Structural Genomics, The Crystal Structure Of A Putative
Kinase From Salmonella Typhimurim Lt2
pdb|2AN1|D Chain D, Structural Genomics, The Crystal Structure Of A Putative
Kinase From Salmonella Typhimurim Lt2
Length = 292
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 7 TSTTSALKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFK 66
T T + + ++ A+V+GG N L AA LAR ++V + R G +L P
Sbjct: 54 TGTLAEIGQQADLAVVVGGDGNMLGAARTLARYDINVIGINR----GNLGFLTDLDPDNA 109
Query: 67 FSRCS------YLQS---LLRPSLIKCG--TRIGETWNEVV----EAKSIIVYAIFEDQL 111
+ S Y+ LL + + RI NEVV + +I + ++ D+
Sbjct: 110 LQQLSDVLEGRYISEKRFLLEAQVCQQDRQKRISTAINEVVLHPGKVAHMIEFEVYIDET 169
Query: 112 DKFSQFVDLLFDSSPPELLQGSSSYS 137
FSQ D L S+P GS++YS
Sbjct: 170 FAFSQRSDGLIISTP----TGSTAYS 191
>pdb|2V1D|A Chain A, Structural Basis Of Lsd1-Corest Selectivity In Histone H3
Recognition
pdb|2Y48|A Chain A, Crystal Structure Of Lsd1-Corest In Complex With A N-
Terminal Snail Peptide
Length = 730
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 19/151 (12%)
Query: 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQ 74
+K ++IG G +GL AA L G+ V +LE R +GG T F + +Y+
Sbjct: 154 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT--------FRKGNYVA 205
Query: 75 SLLRPSLIKCGTRIGETWNEVVE---AKSIIVYAIFEDQLDKFSQFVDLLFDSSPPELLQ 131
L + G ++ V AK ++E + D + + LL+
Sbjct: 206 DLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLE 265
Query: 132 GSSSYSHQFKNKIRNSAFWAHCLRRAISLGQ 162
+S SHQ + N+ + +SLGQ
Sbjct: 266 ATSYLSHQLDFNVLNN--------KPVSLGQ 288
>pdb|2X0L|A Chain A, Crystal Structure Of A Neuro-Specific Splicing Variant Of
Human Histone Lysine Demethylase Lsd1
Length = 734
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58
+K ++IG G +GL AA L G+ V +LE R +GG T
Sbjct: 154 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 197
>pdb|4HAO|A Chain A, Crystal Structure Of Inorganic PolyphosphateATP-Nad Kinase
From Yersinia Pestis Co92
pdb|4HAO|B Chain B, Crystal Structure Of Inorganic PolyphosphateATP-Nad Kinase
From Yersinia Pestis Co92
Length = 304
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 23/148 (15%)
Query: 5 SFTSTTSALKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPG 64
+ T + + + +K A+V+GG N L AA LAR + V + R G +L P
Sbjct: 53 AITGSLADIGQKADLAVVVGGDGNMLGAARVLARYDIKVIGVNR----GNLGFLTDLDPD 108
Query: 65 FKFSRCS------YL--QSLLRPSLIK---CGTRIGETWNEVV----EAKSIIVYAIFED 109
+ S YL Q L + ++ +RI NEVV + +I + ++ D
Sbjct: 109 NALQQLSDVLEGEYLSEQRFLLETHVRRTNQQSRISTAINEVVLHPGKVAHMIEFEVYID 168
Query: 110 QLDKFSQFVDLLFDSSPPELLQGSSSYS 137
FSQ D L ++P GS++YS
Sbjct: 169 DRFAFSQRSDGLIIATP----TGSTAYS 192
>pdb|2Z6G|A Chain A, Crystal Structure Of A Full-Length Zebrafish Beta-Catenin
Length = 780
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 25/206 (12%)
Query: 105 AIFEDQLDKFSQFVDLLFDSSPPELLQGSSSYSHQFKNKIRNSAFW---AHCLRRAISLG 161
A+F + LD+ Q FDS+ P +Q + S K+ + N + A RAI
Sbjct: 96 AMFPETLDEGMQIPSTQFDSAHPTNVQRLAEPSQMLKHAVVNLINYQDDAELATRAIPEL 155
Query: 162 QKDLVEFVDLLLSPASKVLNKWFETD-----VLKATLATDAVIGTMSSVH-------TPG 209
K L + ++++ A+ ++++ + + ++++ A++ TM + + T G
Sbjct: 156 TKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSG 215
Query: 210 SGYVLLHHVMGETDGNPGIWSYVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSG 269
+ + L HH G + + GG+ ++ +GS H +T + L+++ G
Sbjct: 216 TLHNLSHHREGL------LAIFKSGGIPALVNMLGSPVDSVLFHAIT--TLHNLLLHQEG 267
Query: 270 RVNGVQLADGAQVHSSIVLSNATPYK 295
V+LA G Q + L N T K
Sbjct: 268 AKMAVRLAGGLQ--KMVALLNKTNVK 291
>pdb|2EJR|A Chain A, Lsd1-Tranylcypromine Complex
pdb|2Z3Y|A Chain A, Crystal Structure Of Lysine-Specific Demethylase1
pdb|2Z5U|A Chain A, Crystal Structure Of Lysine-Specific Histone Demethylase 1
pdb|3ABT|A Chain A, Crystal Structure Of Lsd1 In Complex With Trans-2-
Pentafluorophenylcyclopropylamine
pdb|3ABU|A Chain A, Crystal Structure Of Lsd1 In Complex With A 2-Pcpa
Derivative, S1201
Length = 662
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58
+K ++IG G +GL AA L G+ V +LE R +GG T
Sbjct: 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 148
>pdb|2IW5|A Chain A, Structural Basis For Corest-dependent Demethylation Of
Nucleosomes By The Human Lsd1 Histone Demethylase
pdb|2UXN|A Chain A, Structural Basis Of Histone Demethylation By Lsd1 Revealed
By Suicide Inactivation
pdb|2UXX|A Chain A, Human Lsd1 Histone Demethylase-Corest In Complex With An
Fad-Tranylcypromine Adduct
Length = 666
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58
+K ++IG G +GL AA L G+ V +LE R +GG T
Sbjct: 106 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 149
>pdb|2H94|A Chain A, Crystal Structure And Mechanism Of Human Lysine-Specific
Demethylase-1
Length = 664
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58
+K ++IG G +GL AA L G+ V +LE R +GG T
Sbjct: 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 148
>pdb|2HKO|A Chain A, Crystal Structure Of Lsd1
Length = 664
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58
+K ++IG G +GL AA L G+ V +LE R +GG T
Sbjct: 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 148
>pdb|2DW4|A Chain A, Crystal Structure Of Human Lsd1 At 2.3 A Resolution
Length = 660
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58
+K ++IG G +GL AA L G+ V +LE R +GG T
Sbjct: 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 148
>pdb|3URH|A Chain A, Crystal Structure Of A Dihydrolipoamide Dehydrogenase
From Sinorhizobium Meliloti 1021
pdb|3URH|B Chain B, Crystal Structure Of A Dihydrolipoamide Dehydrogenase
From Sinorhizobium Meliloti 1021
Length = 491
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIP 63
+D +VIG G G A A+ G VAV+E+R GG + IP
Sbjct: 26 YDLIVIGSGPGGYVCAIKAAQLGXKVAVVEKRSTYGGTCLNVGCIP 71
>pdb|1V0J|A Chain A, Udp-galactopyranose Mutase From Mycobacterium
Tuberculosis
pdb|1V0J|B Chain B, Udp-galactopyranose Mutase From Mycobacterium
Tuberculosis
pdb|1V0J|C Chain C, Udp-galactopyranose Mutase From Mycobacterium
Tuberculosis
pdb|1V0J|D Chain D, Udp-galactopyranose Mutase From Mycobacterium
Tuberculosis
Length = 399
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 17 KWDALVIGGGHNGLTAAAYLA-RAGLSVAVLERRHVIGGAAVTE 59
++D V+G G GLT A +A + V VLERR IGG A +E
Sbjct: 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSE 50
>pdb|1ZDL|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
pdb|1ZKQ|A Chain A, Crystal Structure Of Mouse Thioredoxin Reductase Type 2
Length = 517
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 6 FTSTTSALKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLE--------RRHVIGGAAV 57
S ++A ++ +D LVIGGG GL A A+ G VAV + + +GG V
Sbjct: 21 MASASAAGGQQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCV 80
Query: 58 TEELIPGFKFSRCSYLQSLLR 78
IP + + L ++R
Sbjct: 81 NVGCIPKKLMHQAALLGGMIR 101
>pdb|3LXD|A Chain A, Crystal Structure Of Ferredoxin Reductase Arr From
Novosphingobium Aromaticivorans
Length = 415
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 19 DALVIGGGHNGLTAAAYLARAGLSVAVLE 47
+A+VIGGG+ GL AAA L + G++V +LE
Sbjct: 154 NAVVIGGGYIGLEAAAVLTKFGVNVTLLE 182
>pdb|3NIX|A Chain A, Crystal Structure Of FlavoproteinDEHYDROGENASE FROM
CYTOPHAGA Hutchinsonii. Northeast Structural Genomics
Consortium Target Chr43.
pdb|3NIX|B Chain B, Crystal Structure Of FlavoproteinDEHYDROGENASE FROM
CYTOPHAGA Hutchinsonii. Northeast Structural Genomics
Consortium Target Chr43.
pdb|3NIX|C Chain C, Crystal Structure Of FlavoproteinDEHYDROGENASE FROM
CYTOPHAGA Hutchinsonii. Northeast Structural Genomics
Consortium Target Chr43.
pdb|3NIX|D Chain D, Crystal Structure Of FlavoproteinDEHYDROGENASE FROM
CYTOPHAGA Hutchinsonii. Northeast Structural Genomics
Consortium Target Chr43.
pdb|3NIX|E Chain E, Crystal Structure Of FlavoproteinDEHYDROGENASE FROM
CYTOPHAGA Hutchinsonii. Northeast Structural Genomics
Consortium Target Chr43.
pdb|3NIX|F Chain F, Crystal Structure Of FlavoproteinDEHYDROGENASE FROM
CYTOPHAGA Hutchinsonii. Northeast Structural Genomics
Consortium Target Chr43.
pdb|3NIX|G Chain G, Crystal Structure Of FlavoproteinDEHYDROGENASE FROM
CYTOPHAGA Hutchinsonii. Northeast Structural Genomics
Consortium Target Chr43.
pdb|3NIX|H Chain H, Crystal Structure Of FlavoproteinDEHYDROGENASE FROM
CYTOPHAGA Hutchinsonii. Northeast Structural Genomics
Consortium Target Chr43
Length = 421
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 14/61 (22%)
Query: 14 KEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLER----RHVIGGAAVTEELIPGFKFSR 69
+ +K D LVIG G G AA+ + ++G V ++E+ R VIG E L+P R
Sbjct: 2 QREKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIG-----ESLLP-----R 51
Query: 70 C 70
C
Sbjct: 52 C 52
>pdb|1H7W|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
pdb|1H7W|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
pdb|1H7W|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
pdb|1H7W|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig
pdb|1GT8|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
pdb|1GT8|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
pdb|1GT8|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
pdb|1GT8|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And Uracil-4-Acetic Acid
pdb|1GTE|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
pdb|1GTE|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
pdb|1GTE|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
pdb|1GTE|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Binary
Complex With 5-Iodouracil
pdb|1GTH|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
pdb|1GTH|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
pdb|1GTH|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
pdb|1GTH|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex With Nadph And 5-Iodouracil
Length = 1025
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 22 VIGGGHNGLTAAAYLARAGLS-VAVLERRHVIGGAAVTEELIPGFKF 67
++G G ++ A++LAR G S + + E++ +GG + +E IP F+
Sbjct: 192 LLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSE--IPQFRL 236
>pdb|1H7X|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
pdb|1H7X|B Chain B, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
pdb|1H7X|C Chain C, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
pdb|1H7X|D Chain D, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary
Complex Of A Mutant Enzyme (C671a), Nadph And 5-
Fluorouracil
Length = 1025
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 22 VIGGGHNGLTAAAYLARAGLS-VAVLERRHVIGGAAVTEELIPGFK--FSRCSYLQSLLR 78
++G G ++ A++LAR G S + + E++ +GG + +E IP F+ + ++ L++
Sbjct: 192 LLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSE--IPQFRLPYDVVNFEIELMK 249
Query: 79 PSLIK--CGTRIGETWNEV 95
+K CG + E NE+
Sbjct: 250 DLGVKIICGKSLSE--NEI 266
>pdb|2A87|A Chain A, Crystal Structure Of M. Tuberculosis Thioredoxin
Reductase
pdb|2A87|B Chain B, Crystal Structure Of M. Tuberculosis Thioredoxin
Reductase
Length = 335
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTE---ELIPGFK 66
D +VIG G G TAA Y ARA L+ V E GGA +T E PGF+
Sbjct: 16 DVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FGGALMTTTDVENYPGFR 65
Score = 28.5 bits (62), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERR 49
+ D VIGGG + + A +L R SV ++ RR
Sbjct: 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRR 187
>pdb|3KVE|A Chain A, Structure Of Native L-Amino Acid Oxidase From Vipera
Ammodytes Ammodytes: Stabilization Of The Quaternary
Structure By Divalent Ions And Structural Changes In
The Dynamic Active Site
pdb|3KVE|B Chain B, Structure Of Native L-Amino Acid Oxidase From Vipera
Ammodytes Ammodytes: Stabilization Of The Quaternary
Structure By Divalent Ions And Structural Changes In
The Dynamic Active Site
pdb|3KVE|C Chain C, Structure Of Native L-Amino Acid Oxidase From Vipera
Ammodytes Ammodytes: Stabilization Of The Quaternary
Structure By Divalent Ions And Structural Changes In
The Dynamic Active Site
pdb|3KVE|D Chain D, Structure Of Native L-Amino Acid Oxidase From Vipera
Ammodytes Ammodytes: Stabilization Of The Quaternary
Structure By Divalent Ions And Structural Changes In
The Dynamic Active Site
Length = 486
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 21 LVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58
+V+G G +GL+AA LA AG V VLE GG T
Sbjct: 37 VVVGAGMSGLSAAYVLAGAGHKVTVLEASERAGGRVRT 74
>pdb|2Q0K|A Chain A, Oxidized Thioredoxin Reductase From Helicobacter Pylori
In Complex With Nadp+
pdb|2Q0K|B Chain B, Oxidized Thioredoxin Reductase From Helicobacter Pylori
In Complex With Nadp+
pdb|2Q0L|A Chain A, Helicobacter Pylori Thioredoxin Reductase Reduced By
Sodium Dithionite In Complex With Nadp+
pdb|2Q0L|B Chain B, Helicobacter Pylori Thioredoxin Reductase Reduced By
Sodium Dithionite In Complex With Nadp+
pdb|3ISH|A Chain A, Crystal Structure Of Helicobacter Pylori Thioredoxin
Reductase
pdb|3ISH|B Chain B, Crystal Structure Of Helicobacter Pylori Thioredoxin
Reductase
pdb|3ISH|C Chain C, Crystal Structure Of Helicobacter Pylori Thioredoxin
Reductase
Length = 311
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGG 54
D +IGGG GL+A Y R G+ AVL + + GG
Sbjct: 3 DCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGG 38
>pdb|2JAE|A Chain A, The Structure Of L-Amino Acid Oxidase From Rhodococcus
Opacus In The Unbound State
pdb|2JAE|B Chain B, The Structure Of L-Amino Acid Oxidase From Rhodococcus
Opacus In The Unbound State
pdb|2JB1|A Chain A, The L-Amino Acid Oxidase From Rhodococcus Opacus In
Complex With L-Alanine
pdb|2JB1|B Chain B, The L-Amino Acid Oxidase From Rhodococcus Opacus In
Complex With L-Alanine
pdb|2JB3|A Chain A, The Structure Of L-Amino Acid Oxidase From Rhodococcus
Opacus In Complex With O-Aminobenzoate
pdb|2JB3|B Chain B, The Structure Of L-Amino Acid Oxidase From Rhodococcus
Opacus In Complex With O-Aminobenzoate
pdb|2JB2|A Chain A, The Structure Of L-Amino Acid Oxidase From Rhodococcus
Opacus In Complex With L-Phenylalanine.
pdb|2JB2|B Chain B, The Structure Of L-Amino Acid Oxidase From Rhodococcus
Opacus In Complex With L-Phenylalanine
Length = 489
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 21 LVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58
+V+GGG GL +A L +AG V VLE R GG T
Sbjct: 15 VVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWT 52
>pdb|3DGZ|A Chain A, Crystal Structure Of Mouse Mitochondrial Thioredoxin
Reductase, C- Terminal 3-Residue Truncation
Length = 488
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLE--------RRHVIGGAAVTEELIPGFK 66
++ +D LVIGGG GL A A+ G VAV + + +GG V IP
Sbjct: 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKL 63
Query: 67 FSRCSYLQSLLR 78
+ + L ++R
Sbjct: 64 MHQAALLGGMIR 75
>pdb|3LAD|A Chain A, Refined Crystal Structure Of Lipoamide Dehydrogenase
From Azotobacter Vinelandii At 2.2 Angstroms
Resolution. A Comparison With The Structure Of
Glutathione Reductase
pdb|3LAD|B Chain B, Refined Crystal Structure Of Lipoamide Dehydrogenase
From Azotobacter Vinelandii At 2.2 Angstroms
Resolution. A Comparison With The Structure Of
Glutathione Reductase
Length = 476
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLER------RHVIGGAAVTEELIPGFKFSR 69
+K+D +VIG G G AA A+ GL A++E+ + +GG + IP
Sbjct: 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLD 61
Query: 70 CSY 72
SY
Sbjct: 62 SSY 64
>pdb|1REO|A Chain A, L-Amino Acid Oxidase From Agkistrodon Halys Pallas
pdb|1TDK|A Chain A, L-amino Acid Oxidase From Agkistrodon Halys In Complex
With Suicide Substrate L-vinylglycine
pdb|1TDN|A Chain A, L-Amino Acid Oxidase From Agkistrodon Halys In Complex
With L-Leucine
pdb|1TDO|A Chain A, L-Amino Acid Oxidae From Agkistrodon Halys In Complex
With L- Phenylalanine
Length = 486
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%)
Query: 21 LVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58
+V+G G +GL+AA L+ AG V VLE GG T
Sbjct: 37 VVVGAGMSGLSAAYVLSGAGHQVTVLEASERAGGRVRT 74
>pdb|4AT0|A Chain A, The Crystal Structure Of 3-Ketosteroid-Delta4-(5alpha)-
Dehydrogenase From Rhodococcus Jostii Rha1
pdb|4AT2|A Chain A, The Crystal Structure Of 3-Ketosteroid-Delta4-(5alpha)-
Dehydrogenase From Rhodococcus Jostii Rha1 In Complex
With 4-Androstene-3,17- Dione
Length = 510
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 4 RSFTSTTSALKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGA 55
R ++TT + + D +V G G G+ A+ ARAG V VLER GGA
Sbjct: 28 RPRSATTVTEWDYEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGA 79
>pdb|2VC9|A Chain A, Family 89 Glycoside Hydrolase From Clostridium Perfringens
In Complex With 2-Acetamido-1,2-Dideoxynojirmycin
pdb|2VCA|A Chain A, Family 89 Glycoside Hydrolase From Clostridium Perfringens
In Complex With Beta-N-Acetyl-D-Glucosamine
pdb|2VCB|A Chain A, Family 89 Glycoside Hydrolase From Clostridium Perfringens
In Complex With Pugnac
pdb|2VCC|A Chain A, Family 89 Glycoside Hydrolase From Clostridium Perfringens
Length = 891
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 82/208 (39%), Gaps = 32/208 (15%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTE---------ELIPGFKFS 68
W+ L GG G+ AA + A+ H++G E EL+ ++
Sbjct: 535 WNMLHNFGGRMGMDAAPEKLATEIPKALANSEHMVGIGITPEAINTNPLAYELLFDMAWT 594
Query: 69 RCSYLQSLLRPSLIKCGTRIGETWNEVVEAKSIIVYAIFEDQLDKFSQFVDLLFDSSPPE 128
R I+ R G+T E++EA +II+ ++ + D + + + ++ P
Sbjct: 595 RDQINFRTWTEDYIE--RRYGKTNKEILEAWNIILDTAYKKRNDYYQGAAESIINARPGF 652
Query: 129 LLQGSSSYSHQFKNKIRNSAFWAHCLRRAISLGQKDLVEFVD---LLLSPASKVLNKWFE 185
++ +S++ H KI + +AI + K+ EF D L A
Sbjct: 653 GIKSASTWGHS---KI---VYDKSEFEKAIEIFAKNYDEFKDSDAFLYDFA--------- 697
Query: 186 TDVLKATLATDA--VIGTMSSVHTPGSG 211
D+LK LA A M + + G+G
Sbjct: 698 -DILKQLLANSAQEYYEVMCNAYNNGNG 724
>pdb|2FUG|4 Chain 4, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus
pdb|2FUG|D Chain D, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus
pdb|2FUG|M Chain M, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus
pdb|2FUG|V Chain V, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus
pdb|3I9V|4 Chain 4, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 2 MolASU
pdb|3I9V|D Chain D, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 2 MolASU
pdb|3IAM|4 Chain 4, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Reduced, 2 MolASU,
WITH BOUND NADH
pdb|3IAM|D Chain D, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Reduced, 2 MolASU,
WITH BOUND NADH
pdb|3IAS|4 Chain 4, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 4 MolASU,
RE-Refined To 3.15 Angstrom Resolution
pdb|3IAS|D Chain D, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 4 MolASU,
RE-Refined To 3.15 Angstrom Resolution
pdb|3IAS|M Chain M, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 4 MolASU,
RE-Refined To 3.15 Angstrom Resolution
pdb|3IAS|V Chain V, Crystal Structure Of The Hydrophilic Domain Of Respiratory
Complex I From Thermus Thermophilus, Oxidized, 4 MolASU,
RE-Refined To 3.15 Angstrom Resolution
pdb|3M9S|4 Chain 4, Crystal Structure Of Respiratory Complex I From Thermus
Thermophilus
pdb|3M9S|D Chain D, Crystal Structure Of Respiratory Complex I From Thermus
Thermophilus
pdb|2YBB|4 Chain 4, Fitted Model For Bovine Mitochondrial Supercomplex
I1iii2iv1 By Single Particle Cryo-Em (Emd-1876)
pdb|4HEA|4 Chain 4, Crystal Structure Of The Entire Respiratory Complex I From
Thermus Thermophilus
pdb|4HEA|E Chain E, Crystal Structure Of The Entire Respiratory Complex I From
Thermus Thermophilus
Length = 409
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 9/63 (14%)
Query: 435 IDEYAPGFSSSIIGYDM-----LTPPDLEREIGLTGGNIFHGAMGLDSLFLMRPVKGWSN 489
IDEY F+ S I Y+ + PP++ ++GLTGG++ + D +R +S
Sbjct: 201 IDEYEALFAESPIFYERARGVGVIPPEVAIDLGLTGGSLRASGVNYD----VRKAYPYSG 256
Query: 490 YRT 492
Y T
Sbjct: 257 YET 259
>pdb|3P9U|A Chain A, Crystal Structure Of Tetx2 From Bacteroides
Thetaiotaomicron With Substrate Analogue
pdb|3P9U|B Chain B, Crystal Structure Of Tetx2 From Bacteroides
Thetaiotaomicron With Substrate Analogue
pdb|3P9U|C Chain C, Crystal Structure Of Tetx2 From Bacteroides
Thetaiotaomicron With Substrate Analogue
pdb|3P9U|D Chain D, Crystal Structure Of Tetx2 From Bacteroides
Thetaiotaomicron With Substrate Analogue
Length = 378
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 22 VIGGGHNGLTAAAYLARAGLSVAVLER 48
+IGGG GLT A L + G+ V+V ER
Sbjct: 11 IIGGGPVGLTXAKLLQQNGIDVSVYER 37
>pdb|2XYO|A Chain A, Structural Basis For A New Tetracycline Resistance
Mechanism Relying On The Tetx Monooxygenase
pdb|2XYO|B Chain B, Structural Basis For A New Tetracycline Resistance
Mechanism Relying On The Tetx Monooxygenase
pdb|2XYO|C Chain C, Structural Basis For A New Tetracycline Resistance
Mechanism Relying On The Tetx Monooxygenase
pdb|2XYO|D Chain D, Structural Basis For A New Tetracycline Resistance
Mechanism Relying On The Tetx Monooxygenase
Length = 399
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 22 VIGGGHNGLTAAAYLARAGLSVAVLER 48
+IGGG GLT A L + G+ V+V ER
Sbjct: 32 IIGGGPVGLTXAKLLQQNGIDVSVYER 58
>pdb|3V3N|A Chain A, Crystal Structure Of Tetx2 T280a: An Adaptive Mutant In
Complex With Minocycline
pdb|3V3N|B Chain B, Crystal Structure Of Tetx2 T280a: An Adaptive Mutant In
Complex With Minocycline
pdb|3V3N|C Chain C, Crystal Structure Of Tetx2 T280a: An Adaptive Mutant In
Complex With Minocycline
pdb|3V3N|D Chain D, Crystal Structure Of Tetx2 T280a: An Adaptive Mutant In
Complex With Minocycline
pdb|3V3O|A Chain A, Crystal Structure Of Tetx2 T280a: An Adaptive Mutant In
Complex With Tigecycline
pdb|3V3O|B Chain B, Crystal Structure Of Tetx2 T280a: An Adaptive Mutant In
Complex With Tigecycline
pdb|3V3O|C Chain C, Crystal Structure Of Tetx2 T280a: An Adaptive Mutant In
Complex With Tigecycline
pdb|3V3O|D Chain D, Crystal Structure Of Tetx2 T280a: An Adaptive Mutant In
Complex With Tigecycline
Length = 378
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 22 VIGGGHNGLTAAAYLARAGLSVAVLER 48
+IGGG GLT A L + G+ V+V ER
Sbjct: 11 IIGGGPVGLTMAKLLQQNGIDVSVYER 37
>pdb|1QLB|A Chain A, Respiratory Complex Ii-Like Fumarate Reductase From
Wolinella Succinogenes
pdb|1QLB|D Chain D, Respiratory Complex Ii-Like Fumarate Reductase From
Wolinella Succinogenes
Length = 656
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 13 LKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVL 46
+K + D+LVIGGG GL AA + GLS VL
Sbjct: 1 MKVQYCDSLVIGGGLAGLRAAVATQQKGLSTIVL 34
>pdb|3CTY|A Chain A, Crystal Structure Of T. Acidophilum Thioredoxin
Reductase
pdb|3CTY|B Chain B, Crystal Structure Of T. Acidophilum Thioredoxin
Reductase
Length = 319
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 8 STTSALKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIP---G 64
+ +S KE+ +D +++G G G +AA Y AR+G SVA+L++ V GG L+ G
Sbjct: 7 AVSSEEKERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAPLVENYLG 65
Query: 65 FK 66
FK
Sbjct: 66 FK 67
>pdb|2BS2|A Chain A, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|2BS2|D Chain D, Quinol:fumarate Reductase From Wolinella Succinogenes
Length = 660
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 13 LKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVL 46
+K + D+LVIGGG GL AA + GLS VL
Sbjct: 1 MKVQYCDSLVIGGGLAGLRAAVATQQKGLSTIVL 34
>pdb|1E7P|A Chain A, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|1E7P|D Chain D, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|2BS3|A Chain A, Glu C180-> Gln Variant Quinol:fumarate Reductase From
Wolinella Succinogenes
pdb|2BS3|D Chain D, Glu C180-> Gln Variant Quinol:fumarate Reductase From
Wolinella Succinogenes
pdb|2BS4|A Chain A, Glu C180-> Ile Variant Quinol:fumarate Reductase From
Wolinella Succinogenes
pdb|2BS4|D Chain D, Glu C180-> Ile Variant Quinol:fumarate Reductase From
Wolinella Succinogenes
pdb|1E7P|G Chain G, Quinol:fumarate Reductase From Wolinella Succinogenes
pdb|1E7P|J Chain J, Quinol:fumarate Reductase From Wolinella Succinogenes
Length = 656
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 21/34 (61%)
Query: 13 LKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVL 46
+K + D+LVIGGG GL AA + GLS VL
Sbjct: 1 MKVQYCDSLVIGGGLAGLRAAVATQQKGLSTIVL 34
>pdb|4A6N|A Chain A, Structure Of The Tetracycline Degrading Monooxygenase
Tetx In Complex With Tigecycline
Length = 398
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 22 VIGGGHNGLTAAAYLARAGLSVAVLER 48
+IGGG GLT A L + G+ V+V ER
Sbjct: 31 IIGGGPVGLTMAKLLQQNGIDVSVYER 57
>pdb|3CP8|A Chain A, Crystal Structure Of Gida From Chlorobium Tepidum
pdb|3CP8|B Chain B, Crystal Structure Of Gida From Chlorobium Tepidum
pdb|3CP8|C Chain C, Crystal Structure Of Gida From Chlorobium Tepidum
pdb|3CP8|D Chain D, Crystal Structure Of Gida From Chlorobium Tepidum
Length = 641
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 13/57 (22%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGL----------SVAVLERRHVIGGAA---VTEEL 61
+D +V+G GH G AA +AR GL +VA + IGG A +T E+
Sbjct: 22 YDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREI 78
>pdb|1LPF|A Chain A, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
pdb|1LPF|B Chain B, Three-Dimensional Structure Of Lipoamide Dehydrogenase
From Pseudomonas Fluorescens At 2.8 Angstroms
Resolution. Analysis Of Redox And Thermostability
Properties
Length = 477
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLER------RHVIGGAAVTEELIPGFKFSR 69
+K+D +VIG G G AA A+ GL A +E+ + +GG + IP
Sbjct: 2 QKFDVVVIGAGPGGYVAAIRAAQLGLKTACIEKYIGKEGKVALGGTCLNVGCIPSKALLD 61
Query: 70 CSY 72
SY
Sbjct: 62 SSY 64
>pdb|2XDO|A Chain A, Structure Of The Tetracycline Degrading Monooxygenase
Tetx2 From Bacteroides Thetaiotaomicron
pdb|2XDO|B Chain B, Structure Of The Tetracycline Degrading Monooxygenase
Tetx2 From Bacteroides Thetaiotaomicron
pdb|2XDO|C Chain C, Structure Of The Tetracycline Degrading Monooxygenase
Tetx2 From Bacteroides Thetaiotaomicron
pdb|2XDO|D Chain D, Structure Of The Tetracycline Degrading Monooxygenase
Tetx2 From Bacteroides Thetaiotaomicron
pdb|2Y6Q|A Chain A, Structure Of The Tetx Monooxygenase In Complex With The
Substrate 7-Iodtetracycline
pdb|2Y6Q|B Chain B, Structure Of The Tetx Monooxygenase In Complex With The
Substrate 7-Iodtetracycline
pdb|2Y6Q|C Chain C, Structure Of The Tetx Monooxygenase In Complex With The
Substrate 7-Iodtetracycline
pdb|2Y6Q|D Chain D, Structure Of The Tetx Monooxygenase In Complex With The
Substrate 7-Iodtetracycline
pdb|4A6N|B Chain B, Structure Of The Tetracycline Degrading Monooxygenase
Tetx In Complex With Tigecycline
pdb|4A6N|C Chain C, Structure Of The Tetracycline Degrading Monooxygenase
Tetx In Complex With Tigecycline
pdb|4A6N|D Chain D, Structure Of The Tetracycline Degrading Monooxygenase
Tetx In Complex With Tigecycline
pdb|4A99|A Chain A, Structure Of The Tetracycline Degrading Monooxygenase
Tetx In Complex With Minocycline
pdb|4A99|B Chain B, Structure Of The Tetracycline Degrading Monooxygenase
Tetx In Complex With Minocycline
pdb|4A99|C Chain C, Structure Of The Tetracycline Degrading Monooxygenase
Tetx In Complex With Minocycline
pdb|4A99|D Chain D, Structure Of The Tetracycline Degrading Monooxygenase
Tetx In Complex With Minocycline
Length = 398
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 22 VIGGGHNGLTAAAYLARAGLSVAVLER 48
+IGGG GLT A L + G+ V+V ER
Sbjct: 31 IIGGGPVGLTMAKLLQQNGIDVSVYER 57
>pdb|1UT6|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With N-9-(1',2',3',4'-Tetrahydroacridinyl)-1,8-
Diaminooctane At 2.4 Angstroms Resolution.
pdb|1ACJ|A Chain A, Quaternary Ligand Binding To Aromatic Residues In The
Active-Site Gorge Of Acetylcholinesterase
pdb|1ACL|A Chain A, Quaternary Ligand Binding To Aromatic Residues In The
Active-Site Gorge Of Acetylcholinesterase
Length = 537
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 377 SRRPIIEMTIPSVLDKTISPPGNHVINL-FIQYTPYKPSDGSWMDPAYRDSFANRCFSLI 435
+R P++ I + L + P V N+ F + P KP G W Y N C +
Sbjct: 18 TRVPVLSSHISAFLGIPFAEPP--VGNMRFRRPEPKKPWSGVWNASTY----PNNCQQYV 71
Query: 436 DEYAPGFSSS 445
DE PGFS S
Sbjct: 72 DEQFPGFSGS 81
>pdb|1FSS|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With
Fasciculin-Ii
pdb|1CFJ|A Chain A, Methylphosphonylated Acetylcholinesterase (Aged) Obtained
By Reaction With O-Isopropylmethylphosphonofluoridate
(Gb, Sarin)
pdb|1VXO|A Chain A, Methylphosphonylated Acetylcholinesterase (Aged) Obtained
By Reaction With
O-Ethyl-S-[2-[bis(1-Methylethyl)amino]ethyl]
Methylphosphonothioate (Vx)
pdb|1VXR|A Chain A, O-Ethylmethylphosphonylated Acetylcholinesterase Obtained
By Reaction With
O-Ethyl-S-[2-[bis(1-Methylethyl)amino]ethyl]
Methylphosphonothioate (Vx)
pdb|1QTI|A Chain A, Acetylcholinesterase (E.C.3.1.1.7)
pdb|1QID|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point A) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIE|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point B) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIF|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point C) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIG|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point D) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIH|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point E) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QII|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point F) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIJ|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point G) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIK|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point H) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIM|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point I) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1EA5|A Chain A, Native Acetylcholinesterase (E.C. 3.1.1.7) From Torpedo
Californica At 1.8a Resolution
pdb|1GPK|A Chain A, Structure Of Acetylcholinesterase Complex With
(+)-Huperzine A At 2.1a Resolution
pdb|1GPN|A Chain A, Structure Of Acetylcholinesterase Complexed With Huperzine
B At 2.35a Resolution
pdb|2C4H|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
500mm Acetylthiocholine
pdb|2C5F|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium
pdb|2C5G|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
20mm Thiocholine
pdb|1AMN|A Chain A, Transition State Analog: Acetylcholinesterase Complexed
With M-(N,N,N-Trimethylammonio)trifluoroacetophenone
pdb|1AX9|A Chain A, Acetylcholinesterase Complexed With Edrophonium, Laue Data
pdb|1OCE|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With Mf268
pdb|1VOT|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With
Huperzine A
pdb|2ACE|A Chain A, Native Acetylcholinesterase (E.C. 3.1.1.7) From Torpedo
Californica
pdb|2ACK|A Chain A, Acetylcholinesterase Complexed With Edrophonium,
Monochromatic Data
pdb|2V96|A Chain A, Structure Of The Unphotolysed Complex Of Tcache With 1-(2-
Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine At 100k
pdb|2V96|B Chain B, Structure Of The Unphotolysed Complex Of Tcache With 1-(2-
Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine At 100k
pdb|2V97|A Chain A, Structure Of The Unphotolysed Complex Of Tcache With
1-(2- Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature
pdb|2V97|B Chain B, Structure Of The Unphotolysed Complex Of Tcache With
1-(2- Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature
pdb|2V98|A Chain A, Structure Of The Complex Of Tcache With
1-(2-Nitrophenyl)-2, 2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature, During
The First 5 Seconds Of Which Laser Irradiation At 266nm
Took Place
pdb|2V98|B Chain B, Structure Of The Complex Of Tcache With
1-(2-Nitrophenyl)-2, 2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature, During
The First 5 Seconds Of Which Laser Irradiation At 266nm
Took Place
pdb|2VA9|A Chain A, Structure Of Native Tcache After A 9 Seconds Annealing To
Room Temperature During The First 5 Seconds Of Which
Laser Irradiation At 266nm Took Place
pdb|2VA9|B Chain B, Structure Of Native Tcache After A 9 Seconds Annealing To
Room Temperature During The First 5 Seconds Of Which
Laser Irradiation At 266nm Took Place
pdb|2VJA|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 100k
pdb|2VJA|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 100k
pdb|2VJB|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset D At 100k
pdb|2VJB|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset D At 100k
pdb|2VJC|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-oxo-n,n,n-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 150k
pdb|2VJC|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-oxo-n,n,n-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 150k
pdb|2VJD|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset C At 150k
pdb|2VJD|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset C At 150k
pdb|2VT6|A Chain A, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 9400000 Gy
pdb|2VT6|B Chain B, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 9400000 Gy
pdb|2VT7|A Chain A, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 800000 Gy
pdb|2VT7|B Chain B, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 800000 Gy
pdb|2WFZ|A Chain A, Non-Aged Conjugate Of Torpedo Californica
Acetylcholinesterase With Soman
pdb|2WG0|A Chain A, Aged Conjugate Of Torpedo Californica Acetylcholinesterase
With Soman (Obtained By In Crystallo Aging)
pdb|2WG1|A Chain A, Ternary Complex Of The Aged Conjugate Of Torpedo
Californica Aceylcholinesterase With Soman And 2-Pam
pdb|2WG2|A Chain A, Non-Aged Conjugate Of Torpedo Californica
Acetylcholinesterase With Soman (Alternative Refinement)
pdb|2XI4|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
Aflatoxin B1 (Orthorhombic Space Group)
pdb|2XI4|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With
Aflatoxin B1 (Orthorhombic Space Group)
Length = 537
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 377 SRRPIIEMTIPSVLDKTISPPGNHVINL-FIQYTPYKPSDGSWMDPAYRDSFANRCFSLI 435
+R P++ I + L + P V N+ F + P KP G W Y N C +
Sbjct: 18 TRVPVLSSHISAFLGIPFAEPP--VGNMRFRRPEPKKPWSGVWNASTY----PNNCQQYV 71
Query: 436 DEYAPGFSSS 445
DE PGFS S
Sbjct: 72 DEQFPGFSGS 81
>pdb|1EEA|A Chain A, Acetylcholinesterase
Length = 534
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 377 SRRPIIEMTIPSVLDKTISPPGNHVINL-FIQYTPYKPSDGSWMDPAYRDSFANRCFSLI 435
+R P++ I + L + P V N+ F + P KP G W Y N C +
Sbjct: 18 TRVPVLSSHISAFLGIPFAEPP--VGNMRFRRPEPKKPWSGVWNASTY----PNNCQQYV 71
Query: 436 DEYAPGFSSS 445
DE PGFS S
Sbjct: 72 DEQFPGFSGS 81
>pdb|3I6M|A Chain A, 3d Structure Of Torpedo Californica Acetylcholinesterase
Complexed With N-Piperidinopropyl-Galanthamine
pdb|3I6Z|A Chain A, 3d Structure Of Torpedo Californica Acetylcholinesterase
Complexed With N-Saccharinohexyl-Galanthamine
Length = 534
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 377 SRRPIIEMTIPSVLDKTISPPGNHVINL-FIQYTPYKPSDGSWMDPAYRDSFANRCFSLI 435
+R P++ I + L + P V N+ F + P KP G W Y N C +
Sbjct: 17 TRVPVLSSHISAFLGIPFAEPP--VGNMRFRRPEPKKPWSGVWNASTY----PNNCQQYV 70
Query: 436 DEYAPGFSSS 445
DE PGFS S
Sbjct: 71 DEQFPGFSGS 80
>pdb|2W6C|X Chain X, Ache In Complex With A Bis-(-)-Nor-Meptazinol Derivative
pdb|2W9I|A Chain A, Ache In Complex With Methylene Blue
Length = 586
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 9/71 (12%)
Query: 377 SRRPIIEMTIPSVLDKTISPP--GNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSL 434
+R P++ I + L + P GN F + P KP G W Y N C
Sbjct: 39 TRVPVLSSHISAFLGIPFAEPPVGNM---RFRRPEPKKPWSGVWNASTY----PNNCQQY 91
Query: 435 IDEYAPGFSSS 445
+DE PGFS S
Sbjct: 92 VDEQFPGFSGS 102
>pdb|2DFP|A Chain A, X-Ray Structure Of Aged Di-Isopropyl-Phosphoro-Fluoridate
(Dfp) Bound To Acetylcholinesterase
Length = 534
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 377 SRRPIIEMTIPSVLDKTISPPGNHVINL-FIQYTPYKPSDGSWMDPAYRDSFANRCFSLI 435
+R P++ I + L + P V N+ F + P KP G W Y N C +
Sbjct: 17 TRVPVLSSHISAFLGIPFAEPP--VGNMRFRRPEPKKPWSGVWNASTY----PNNCQQYV 70
Query: 436 DEYAPGFSSS 445
DE PGFS S
Sbjct: 71 DEQFPGFSGS 80
>pdb|2Y6R|A Chain A, Structure Of The Tetx Monooxygenase In Complex With The
Substrate 7-Chlortetracycline
pdb|2Y6R|B Chain B, Structure Of The Tetx Monooxygenase In Complex With The
Substrate 7-Chlortetracycline
pdb|2Y6R|C Chain C, Structure Of The Tetx Monooxygenase In Complex With The
Substrate 7-Chlortetracycline
pdb|2Y6R|D Chain D, Structure Of The Tetx Monooxygenase In Complex With The
Substrate 7-Chlortetracycline
Length = 398
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 22 VIGGGHNGLTAAAYLARAGLSVAVLER 48
+IGGG GLT A L + G+ V+V ER
Sbjct: 31 IIGGGPVGLTMAKLLQQNGIDVSVYER 57
>pdb|2C58|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
20mm Acetylthiocholine
Length = 537
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 377 SRRPIIEMTIPSVLDKTISPPGNHVINL-FIQYTPYKPSDGSWMDPAYRDSFANRCFSLI 435
+R P++ I + L + P V N+ F + P KP G W Y N C +
Sbjct: 18 TRVPVLSSHISAFLGIPFAEPP--VGNMRFRRPEPKKPWSGVWNASTY----PNNCQQYV 71
Query: 436 DEYAPGFSSS 445
DE PGFS S
Sbjct: 72 DEQFPGFSGS 81
>pdb|2CEK|A Chain A, Conformational Flexibility In The Peripheral Site Of
Torpedo Californica Acetylcholinesterase Revealed By The
Complex Structure With A Bifunctional Inhibitor
Length = 535
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 377 SRRPIIEMTIPSVLDKTISPPGNHVINL-FIQYTPYKPSDGSWMDPAYRDSFANRCFSLI 435
+R P++ I + L + P V N+ F + P KP G W Y N C +
Sbjct: 18 TRVPVLSSHISAFLGIPFAEPP--VGNMRFRRPEPKKPWSGVWNASTY----PNNCQQYV 71
Query: 436 DEYAPGFSSS 445
DE PGFS S
Sbjct: 72 DEQFPGFSGS 81
>pdb|1SOM|A Chain A, Torpedo Californica Acetylcholinesterase Inhibited By
Nerve Agent Gd (Soman).
pdb|1DX6|A Chain A, Structure Of Acetylcholinesterase Complexed With
(-)-Galanthamine At 2.3a Resolution
pdb|1E3Q|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With
Bw284c51
pdb|1E66|A Chain A, Structure Of Acetylcholinesterase Complexed With
(-)-Huprine X At 2.1a Resolution
pdb|1HBJ|A Chain A, X-Ray Crystal Structure Of Complex Between Torpedo
Californica Ache And A Reversible Inhibitor, 4-Amino-5-
Fluo Ro-2-Methyl-3-(3-Trifluoroacetylbenzylthiomethyl)
Quinoline
pdb|1H22|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With (S,S)-(-)-Bis(10)-Hupyridone At 2.15a Resolution
pdb|1H23|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With (S,S)-(-)-Bis(12)-Hupyridone At 2.15a Resolution
pdb|1W4L|A Chain A, Complex Of Tcache With Bis-Acting Galanthamine Derivative
pdb|1W6R|A Chain A, Complex Of Tcache With Galanthamine Derivative
pdb|1W75|A Chain A, Native Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache)
pdb|1W75|B Chain B, Native Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache)
pdb|1W76|A Chain A, Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache) Complexed With Bis-Acting
Galanthamine Derivative
pdb|1W76|B Chain B, Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache) Complexed With Bis-Acting
Galanthamine Derivative
pdb|1ODC|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With N-4'-Quinolyl-N'-9"-(1",2",3",4"
-Tetrahydroacridinyl)-1,8-Diaminooctane At 2.2a
Resolution
pdb|1U65|A Chain A, Ache W. Cpt-11
pdb|1ZGB|A Chain A, Crystal Structure Of Torpedo Californica
Acetylcholinesterase In Complex With An
(R)-Tacrine(10)-Hupyridone Inhibitor.
pdb|1ZGC|A Chain A, Crystal Structure Of Torpedo Californica
Acetylcholinesterase In Complex With An
(Rs)-Tacrine(10)-Hupyridone Inhibitor.
pdb|1ZGC|B Chain B, Crystal Structure Of Torpedo Californica
Acetylcholinesterase In Complex With An
(Rs)-Tacrine(10)-Hupyridone Inhibitor.
pdb|2BAG|A Chain A, 3d Structure Of Torpedo Californica Acetylcholinesterase
Complexed With Ganstigmine
pdb|2CKM|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With
Alkylene-Linked Bis-Tacrine Dimer (7 Carbon Linker)
pdb|2CMF|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With
Alkylene-Linked Bis-Tacrine Dimer (5 Carbon Linker)
pdb|2J4F|A Chain A, Torpedo Acetylcholinesterase - Hg Heavy-Atom Derivative
pdb|1EVE|A Chain A, Three Dimensional Structure Of The Anti-Alzheimer Drug,
E2020 (Aricept), Complexed With Its Target
Acetylcholinesterase
pdb|2J3Q|A Chain A, Torpedo Acetylcholinesterase Complexed With Fluorophore
Thioflavin T
pdb|2VQ6|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With 2-
Pam
pdb|2J3D|A Chain A, Native Monoclinic Form Of Torpedo Acetylcholinesterase
pdb|3M3D|A Chain A, Crystal Structure Of Acetylcholinesterase In Complex With
Xenon
pdb|3ZV7|A Chain A, Torpedo Californica Acetylcholinesterase Inhibition By
Bisnorcymserine
Length = 543
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 377 SRRPIIEMTIPSVLDKTISPPGNHVINL-FIQYTPYKPSDGSWMDPAYRDSFANRCFSLI 435
+R P++ I + L + P V N+ F + P KP G W Y N C +
Sbjct: 18 TRVPVLSSHISAFLGIPFAEPP--VGNMRFRRPEPKKPWSGVWNASTY----PNNCQQYV 71
Query: 436 DEYAPGFSSS 445
DE PGFS S
Sbjct: 72 DEQFPGFSGS 81
>pdb|3GEL|A Chain A, O-Methylphosphorylated Torpedo Acetylcholinesterase
Obtained By Reaction With Methyl Paraoxon (Aged)
Length = 532
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 9/71 (12%)
Query: 377 SRRPIIEMTIPSVLDKTISPP--GNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSL 434
+R P++ I + L + P GN F + P KP G W Y N C
Sbjct: 15 TRVPVLSSHISAFLGIPFAEPPVGNM---RFRRPEPKKPWSGVWNASTY----PNNCQQY 67
Query: 435 IDEYAPGFSSS 445
+DE PGFS S
Sbjct: 68 VDEQFPGFSGS 78
>pdb|1GQR|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With
Rivastigmine
pdb|1GQS|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With Nap
pdb|1JJB|A Chain A, A Neutral Molecule In Cation-Binding Site: Specific
Binding Of Peg-Sh To Acetylcholinesterase From Torpedo
Californica
Length = 532
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 377 SRRPIIEMTIPSVLDKTISPPGNHVINL-FIQYTPYKPSDGSWMDPAYRDSFANRCFSLI 435
+R P++ I + L + P V N+ F + P KP G W Y N C +
Sbjct: 15 TRVPVLSSHISAFLGIPFAEPP--VGNMRFRRPEPKKPWSGVWNASTY----PNNCQQYV 68
Query: 436 DEYAPGFSSS 445
DE PGFS S
Sbjct: 69 DEQFPGFSGS 78
>pdb|1F8R|A Chain A, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma Complexed With Citrate
pdb|1F8R|B Chain B, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma Complexed With Citrate
pdb|1F8R|C Chain C, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma Complexed With Citrate
pdb|1F8R|D Chain D, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma Complexed With Citrate
pdb|1F8S|A Chain A, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|B Chain B, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|C Chain C, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|D Chain D, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|E Chain E, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|F Chain F, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|G Chain G, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|1F8S|H Chain H, Crystal Structure Of L-Amino Acid Oxidase From
Calloselasma Rhodostoma, Complexed With Three Molecules
Of O-Aminobenzoate.
pdb|2IID|A Chain A, Structure Of L-Amino Acid Oxidase From Calloselasma
Rhodostoma In Complex With L-Phenylalanine
pdb|2IID|B Chain B, Structure Of L-Amino Acid Oxidase From Calloselasma
Rhodostoma In Complex With L-Phenylalanine
pdb|2IID|C Chain C, Structure Of L-Amino Acid Oxidase From Calloselasma
Rhodostoma In Complex With L-Phenylalanine
pdb|2IID|D Chain D, Structure Of L-Amino Acid Oxidase From Calloselasma
Rhodostoma In Complex With L-Phenylalanine
Length = 498
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 21 LVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58
+++G G GL+AA LA AG V VLE GG T
Sbjct: 37 VIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRT 74
>pdb|2J04|B Chain B, The Tau60-Tau91 Subcomplex Of Yeast Transcription Factor
Iiic
pdb|2J04|D Chain D, The Tau60-Tau91 Subcomplex Of Yeast Transcription Factor
Iiic
Length = 524
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Query: 281 QVHSSIVLSNATPYKTFMDLVPGNILPDDFILSIKHSDYSSGTTKINLAVDKLPQFQCCK 340
QVH S +LS +T Y F D V + D + D ++ T ++ +F+
Sbjct: 305 QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVS-------RFRGSN 357
Query: 341 LSHPDPGPQHVGTIHI-GSESMEEIHSACQEAVNGLPSRRPII 382
L PQ I+ G+ S+ + S AV+ L SR I
Sbjct: 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTI 400
>pdb|4A4A|A Chain A, Cpgh89 (E483q, E601q), From Clostridium Perfringens, In
Complex With Its Substrate Glcnac-Alpha-1,4-Galactose
Length = 914
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 82/208 (39%), Gaps = 32/208 (15%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTE---------ELIPGFKFS 68
W+ L GG G+ AA + A+ H++G + EL+ ++
Sbjct: 558 WNMLHNFGGRMGMDAAPEKLATEIPKALANSEHMVGIGITPQAINTNPLAYELLFDMAWT 617
Query: 69 RCSYLQSLLRPSLIKCGTRIGETWNEVVEAKSIIVYAIFEDQLDKFSQFVDLLFDSSPPE 128
R I+ R G+T E++EA +II+ ++ + D + + + ++ P
Sbjct: 618 RDQINFRTWTEDYIE--RRYGKTNKEILEAWNIILDTAYKKRNDYYQGAAESIINARPGF 675
Query: 129 LLQGSSSYSHQFKNKIRNSAFWAHCLRRAISLGQKDLVEFVD---LLLSPASKVLNKWFE 185
++ +S++ H KI + +AI + K+ EF D L A
Sbjct: 676 GIKSASTWGHS---KI---VYDKSEFEKAIEIFAKNYDEFKDSDAFLYDFA--------- 720
Query: 186 TDVLKATLATDA--VIGTMSSVHTPGSG 211
D+LK LA A M + + G+G
Sbjct: 721 -DILKQLLANSAQEYYEVMCNAYNNGNG 747
>pdb|4FR5|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Y210s
Mutant From Helicobacter Pylori In Complex With
Shikimate
pdb|4FR5|B Chain B, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Y210s
Mutant From Helicobacter Pylori In Complex With
Shikimate
Length = 271
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 12 ALKEKKW-DALVIGGGHNGLTAAAYLARAGLSVAVLER 48
+LK+K + +AL++G G + A L + GL V+VL R
Sbjct: 112 SLKQKNYQNALILGAGGSAKALACELKKQGLQVSVLNR 149
>pdb|4FPX|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Q237n
Mutant From Helicobacter Pylori
pdb|4FPX|B Chain B, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Q237n
Mutant From Helicobacter Pylori
Length = 271
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 12 ALKEKKW-DALVIGGGHNGLTAAAYLARAGLSVAVLER 48
+LK+K + +AL++G G + A L + GL V+VL R
Sbjct: 112 SLKQKNYQNALILGAGGSAKALACELKKQGLQVSVLNR 149
>pdb|4FOO|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Q237k
Mutant From Helicobacter Pylori
pdb|4FOO|B Chain B, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Q237k
Mutant From Helicobacter Pylori
Length = 271
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 12 ALKEKKW-DALVIGGGHNGLTAAAYLARAGLSVAVLER 48
+LK+K + +AL++G G + A L + GL V+VL R
Sbjct: 112 SLKQKNYQNALILGAGGSAKALACELKKQGLQVSVLNR 149
>pdb|3PHG|A Chain A, Crystal Structure Of The Shikimate 5-Dehydrogenase (Aroe)
From Helicobacter Pylori
pdb|3PHG|B Chain B, Crystal Structure Of The Shikimate 5-Dehydrogenase (Aroe)
From Helicobacter Pylori
pdb|3PHH|A Chain A, Shikimate 5-Dehydrogenase (Aroe) From Helicobacter Pylori
In Complex With Shikimate
pdb|3PHI|A Chain A, Shikimate 5-Dehydrogenase (Aroe) From Helicobacter Pylori
In Complex With Shikimate And Nadph
pdb|3PHI|B Chain B, Shikimate 5-Dehydrogenase (Aroe) From Helicobacter Pylori
In Complex With Shikimate And Nadph
pdb|3PHJ|A Chain A, Shikimate 5-Dehydrogenase (Aroe) From Helicobacter Pylori
In Complex With 3-Dehydroshikimate
pdb|3PHJ|B Chain B, Shikimate 5-Dehydrogenase (Aroe) From Helicobacter Pylori
In Complex With 3-Dehydroshikimate
Length = 269
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 12 ALKEKKW-DALVIGGGHNGLTAAAYLARAGLSVAVLER 48
+LK+K + +AL++G G + A L + GL V+VL R
Sbjct: 112 SLKQKNYQNALILGAGGSAKALACELKKQGLQVSVLNR 149
>pdb|4FQ8|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Y210a
Mutant From Helicobacter Pylori In Complex With
Shikimate
pdb|4FQ8|B Chain B, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Y210a
Mutant From Helicobacter Pylori In Complex With
Shikimate
Length = 271
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 12 ALKEKKW-DALVIGGGHNGLTAAAYLARAGLSVAVLER 48
+LK+K + +AL++G G + A L + GL V+VL R
Sbjct: 112 SLKQKNYQNALILGAGGSAKALACELKKQGLQVSVLNR 149
>pdb|4FOS|A Chain A, Crystal Structure Of Shikimate Dehydrogenase (Aroe) Q237a
Mutant From Helicobacter Pylori In Complex With
Shikimate
Length = 271
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 12 ALKEKKW-DALVIGGGHNGLTAAAYLARAGLSVAVLER 48
+LK+K + +AL++G G + A L + GL V+VL R
Sbjct: 112 SLKQKNYQNALILGAGGSAKALACELKKQGLQVSVLNR 149
>pdb|3LZW|A Chain A, Crystal Structure Of Ferredoxin-Nadp+ Oxidoreductase From
Bacillus Subtilis (Form I)
pdb|3LZX|A Chain A, Crystal Structure Of Ferredoxin-Nadp+ Oxidoreductase From
Bacillus Subtilis (Form Ii)
pdb|3LZX|B Chain B, Crystal Structure Of Ferredoxin-Nadp+ Oxidoreductase From
Bacillus Subtilis (Form Ii)
Length = 332
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 20/191 (10%)
Query: 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGG---AAVTEELI---PGFKFSR 69
K +D +IGGG GL A Y SV ++E +GG A E+ I GF R
Sbjct: 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIR 65
Query: 70 CSYLQSLLRPSLIKCGTRIG-ETWNEVVEAKSIIVYAIFEDQLDKFSQFVDLLFDS---S 125
L + L+ + K I E E VE ++ V+ + ++ +S+ V + +
Sbjct: 66 AQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEETHYSKTVIITAGNGAFK 125
Query: 126 PPEL-LQGSSSYS----HQFKNKIRNSAFWAHCLRRAISLGQKDLVEFVDLLLSPASKVL 180
P +L L+ + Y H F + ++ A RR LG D L+L P +K +
Sbjct: 126 PRKLELENAEQYEGKNLHYFVDDLQKFAG-----RRVAILGGGDSAVDWALMLEPIAKEV 180
Query: 181 NKWFETDVLKA 191
+ D +A
Sbjct: 181 SIIHRRDKFRA 191
>pdb|2ZR1|A Chain A, Agglutinin From Abrus Precatorius
pdb|2ZR1|C Chain C, Agglutinin From Abrus Precatorius
Length = 258
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 129 LLQGSSSYSHQFKNKIRNSAFWAHCLRRAISLGQKDLVEFVDLLLSPAS 177
L G+ YS F + WAH R+ ISLG + L + + L S AS
Sbjct: 97 LFTGTQQYSLPFDGNYDDLEKWAHQSRQRISLGLEALRQGIKFLRSGAS 145
>pdb|1KDG|A Chain A, Crystal Structure Of The Flavin Domain Of Cellobiose
Dehydrogenase
pdb|1KDG|B Chain B, Crystal Structure Of The Flavin Domain Of Cellobiose
Dehydrogenase
Length = 546
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 13 LKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLER 48
+ +D +++G G G+ AA L+ AG V +LER
Sbjct: 3 VSATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLER 38
>pdb|2Q3N|A Chain A, Agglutinin From Abrus Precatorius (Apa-I)
Length = 260
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 129 LLQGSSSYSHQFKNKIRNSAFWAHCLRRAISLGQKDLVEFVDLLLSPAS 177
L G+ YS F + WAH R+ ISLG + L + + L S AS
Sbjct: 97 LFTGTQQYSLPFDGNYDDLEKWAHQSRQRISLGLEALRQGIKFLRSGAS 145
>pdb|1NAA|A Chain A, Cellobiose Dehydrogenase Flavoprotein Fragment In
Complex With Cellobionolactam
pdb|1NAA|B Chain B, Cellobiose Dehydrogenase Flavoprotein Fragment In
Complex With Cellobionolactam
Length = 541
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLER 48
+D +++G G G+ AA L+ AG V +LER
Sbjct: 3 YDYIIVGAGPGGIIAADRLSEAGKKVLLLER 33
>pdb|1ZMC|A Chain A, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase Complexed To Nad+
pdb|1ZMC|B Chain B, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase Complexed To Nad+
pdb|1ZMC|C Chain C, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase Complexed To Nad+
pdb|1ZMC|D Chain D, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase Complexed To Nad+
pdb|1ZMC|E Chain E, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase Complexed To Nad+
pdb|1ZMC|F Chain F, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase Complexed To Nad+
pdb|1ZMC|G Chain G, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase Complexed To Nad+
pdb|1ZMC|H Chain H, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase Complexed To Nad+
pdb|1ZMD|A Chain A, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase Complexed To Nadh
pdb|1ZMD|B Chain B, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase Complexed To Nadh
pdb|1ZMD|C Chain C, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase Complexed To Nadh
pdb|1ZMD|D Chain D, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase Complexed To Nadh
pdb|1ZMD|E Chain E, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase Complexed To Nadh
pdb|1ZMD|F Chain F, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase Complexed To Nadh
pdb|1ZMD|G Chain G, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase Complexed To Nadh
pdb|1ZMD|H Chain H, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase Complexed To Nadh
pdb|2F5Z|A Chain A, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase (E3) Complexed To The E3-Binding Domain
Of Human E3- Binding Protein
pdb|2F5Z|B Chain B, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase (E3) Complexed To The E3-Binding Domain
Of Human E3- Binding Protein
pdb|2F5Z|C Chain C, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase (E3) Complexed To The E3-Binding Domain
Of Human E3- Binding Protein
pdb|2F5Z|D Chain D, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase (E3) Complexed To The E3-Binding Domain
Of Human E3- Binding Protein
pdb|2F5Z|E Chain E, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase (E3) Complexed To The E3-Binding Domain
Of Human E3- Binding Protein
pdb|2F5Z|F Chain F, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase (E3) Complexed To The E3-Binding Domain
Of Human E3- Binding Protein
pdb|2F5Z|G Chain G, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase (E3) Complexed To The E3-Binding Domain
Of Human E3- Binding Protein
pdb|2F5Z|H Chain H, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase (E3) Complexed To The E3-Binding Domain
Of Human E3- Binding Protein
pdb|2F5Z|I Chain I, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase (E3) Complexed To The E3-Binding Domain
Of Human E3- Binding Protein
pdb|2F5Z|J Chain J, Crystal Structure Of Human Dihydrolipoamide
Dehydrogenase (E3) Complexed To The E3-Binding Domain
Of Human E3- Binding Protein
Length = 474
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIP 63
D VIG G G AA A+ G +E+ +GG + IP
Sbjct: 8 DVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIP 52
>pdb|3RNM|A Chain A, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|B Chain B, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|C Chain C, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
pdb|3RNM|D Chain D, The Crystal Structure Of The Subunit Binding Of Human
Dihydrolipoamide Transacylase (E2b) Bound To Human
Dihydrolipoamide Dehydrogenase (E3)
Length = 495
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIP 63
D VIG G G AA A+ G +E+ +GG + IP
Sbjct: 29 DVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIP 73
>pdb|1ZY8|A Chain A, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|B Chain B, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|C Chain C, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|D Chain D, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|E Chain E, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|F Chain F, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|G Chain G, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|H Chain H, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|I Chain I, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex.
pdb|1ZY8|J Chain J, The Crystal Structure Of Dihydrolipoamide Dehydrogenase
And Dihydrolipoamide Dehydrogenase-Binding Protein
(Didomain) Subcomplex Of Human Pyruvate Dehydrogenase
Complex
Length = 474
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIP 63
D VIG G G AA A+ G +E+ +GG + IP
Sbjct: 8 DVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIP 52
>pdb|3II4|A Chain A, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
pdb|3II4|B Chain B, Structure Of Mycobacterial Lipoamide Dehydrogenase Bound
To A Triazaspirodimethoxybenzoyl Inhibitor
Length = 466
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYL 73
+D +V+G G G AA A+ GLS A++E ++ GG + IP R + L
Sbjct: 6 YDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAEL 60
>pdb|3UKA|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus
pdb|3UKA|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus
pdb|3UKA|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus
pdb|3UKA|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus
pdb|3UKF|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
pdb|3UKF|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp (Reduced)
Length = 509
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 19 DALVIGGGHNGLTAAAYLARA-GLSVAVLERRHVIGGAAVTEELIPGFK--------FSR 69
D LVIG G GL AA L + G S +++ GG A T+ GF FS
Sbjct: 8 DVLVIGAGPTGLGAAKRLNQIDGPSWXIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSH 67
Query: 70 CSYLQSLLRPSLIK 83
Y L +L K
Sbjct: 68 YKYFDDCLDEALPK 81
>pdb|2YLW|A Chain A, Snapshots Of Enzymatic Baeyer-Villiger Catalysis: Oxygen
Activation And Intermediate Stabilization: Arg337lys
Mutant In Complex With Mes
pdb|2YM1|A Chain A, Snapshots Of Enzymatic Baeyer-Villiger Catalysis: Oxygen
Activation And Intermediate Stabilization: Arg337lys
Mutant In Complex With Nadp
pdb|2YM2|A Chain A, Snapshots Of Enzymatic Baeyer-Villiger Catalysis: Oxygen
Activation And Intermediate Stabilization: Arg337lys
Mutant Reduced State With Nadp
Length = 542
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGG 54
D LV+G G +GL A L G SV V+E +GG
Sbjct: 18 DVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG 53
>pdb|1W4X|A Chain A, Phenylacetone Monooxygenase, A Baeyer-villiger
Monooxygenase
pdb|2YLR|A Chain A, Snapshots Of Enzymatic Baeyer-Villiger Catalysis: Oxygen
Activation And Intermediate Stabilization: Complex With
Nadp
pdb|2YLS|A Chain A, Snapshots Of Enzymatic Baeyer-Villiger Catalysis: Oxygen
Activation And Intermediate Stabilization: Reduced
Enzyme Bound To Nadp
pdb|2YLT|A Chain A, Snapshots Of Enzymatic Baeyer-Villiger Catalysis: Oxygen
Activation And Intermediate Stabilization: Complex With
Nadp And Mes
Length = 542
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGG 54
D LV+G G +GL A L G SV V+E +GG
Sbjct: 18 DVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG 53
>pdb|2A8X|A Chain A, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
pdb|2A8X|B Chain B, Crystal Structure Of Lipoamide Dehydrogenase From
Mycobacterium Tuberculosis
Length = 464
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYL 73
+D +V+G G G AA A+ GLS A++E ++ GG + IP R + L
Sbjct: 4 YDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAEL 58
>pdb|3UKP|A Chain A, Crystal Structure Of R327a Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|B Chain B, Crystal Structure Of R327a Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|C Chain C, Crystal Structure Of R327a Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|D Chain D, Crystal Structure Of R327a Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|E Chain E, Crystal Structure Of R327a Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|F Chain F, Crystal Structure Of R327a Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|G Chain G, Crystal Structure Of R327a Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKP|H Chain H, Crystal Structure Of R327a Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
Length = 509
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 19 DALVIGGGHNGLTAAAYLARA-GLSVAVLERRHVIGGAAVTEELIPGFK--------FSR 69
D LVIG G GL AA L + G S +++ GG A T+ GF FS
Sbjct: 8 DVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSH 67
Query: 70 CSYLQSLLRPSLIK 83
Y L +L K
Sbjct: 68 YKYFDDCLDEALPK 81
>pdb|3UKQ|A Chain A, Crystal Structure Of R327k Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|B Chain B, Crystal Structure Of R327k Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|C Chain C, Crystal Structure Of R327k Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKQ|D Chain D, Crystal Structure Of R327k Udp-Galactopyranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
Length = 510
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 19 DALVIGGGHNGLTAAAYLARA-GLSVAVLERRHVIGGAAVTEELIPGFK--------FSR 69
D LVIG G GL AA L + G S +++ GG A T+ GF FS
Sbjct: 8 DVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSH 67
Query: 70 CSYLQSLLRPSLIK 83
Y L +L K
Sbjct: 68 YKYFDDCLDEALPK 81
>pdb|2YLZ|A Chain A, Snapshots Of Enzymatic Baeyer-Villiger Catalysis: Oxygen
Activation And Intermediate Stabilization: Met446gly
Mutant
Length = 542
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGG 54
D LV+G G +GL A L G SV V+E +GG
Sbjct: 18 DVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG 53
>pdb|3O0H|A Chain A, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
pdb|3O0H|B Chain B, Crystal Structure Of Glutathione Reductase From Bartonella
Henselae
Length = 484
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 37/87 (42%), Gaps = 7/87 (8%)
Query: 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIP-GFKFSRCSYLQSL 76
+D VIG G G+ AA G VA+ E + IGG V +P F Y Q
Sbjct: 27 FDLFVIGSGSGGVRAARLAGALGKRVAIAE-EYRIGGTCVIRGCVPKKLYFYASQYAQEF 85
Query: 77 LRPSLIKCGTRIGE---TWNEVVEAKS 100
+ I G + + W ++V AK+
Sbjct: 86 SKS--IGFGWKYADPIFNWEKLVAAKN 110
>pdb|3UKK|A Chain A, Crystal Structure Of R182k-Udp-Galactopuranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|B Chain B, Crystal Structure Of R182k-Udp-Galactopuranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|C Chain C, Crystal Structure Of R182k-Udp-Galactopuranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
pdb|3UKK|D Chain D, Crystal Structure Of R182k-Udp-Galactopuranose Mutase
From Aspergillus Fumigatus In Complex With Udpgalp
Length = 517
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 19 DALVIGGGHNGLTAAAYLARA-GLSVAVLERRHVIGGAAVTEELIPGFK--------FSR 69
D LVIG G GL AA L + G S +++ GG A T+ GF FS
Sbjct: 8 DVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSH 67
Query: 70 CSYLQSLLRPSLIK 83
Y L +L K
Sbjct: 68 YKYFDDCLDEALPK 81
>pdb|3UKH|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
pdb|3UKH|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udpgalp
(Non-Reduced)
Length = 519
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 19 DALVIGGGHNGLTAAAYLARA-GLSVAVLERRHVIGGAAVTEELIPGFK--------FSR 69
D LVIG G GL AA L + G S +++ GG A T+ GF FS
Sbjct: 8 DVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSH 67
Query: 70 CSYLQSLLRPSLIK 83
Y L +L K
Sbjct: 68 YKYFDDCLDEALPK 81
>pdb|2YLX|A Chain A, Snapshots Of Enzymatic Baeyer-Villiger Catalysis: Oxygen
Activation And Intermediate Stabilization: Asp66ala
Mutant In Complex With Nadp And Mes
Length = 542
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGG 54
D LV+G G +GL A L G SV V+E +GG
Sbjct: 18 DVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG 53
>pdb|3UKL|A Chain A, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|B Chain B, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|C Chain C, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|D Chain D, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|E Chain E, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|F Chain F, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|G Chain G, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
pdb|3UKL|H Chain H, Crystal Structure Of Udp-Galactopyranose Mutase From
Aspergillus Fumigatus In Complex With Udp
Length = 510
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 19 DALVIGGGHNGLTAAAYLARA-GLSVAVLERRHVIGGAAVTEELIPGFK--------FSR 69
D LVIG G GL AA L + G S +++ GG A T+ GF FS
Sbjct: 8 DVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSH 67
Query: 70 CSYLQSLLRPSLIK 83
Y L +L K
Sbjct: 68 YKYFDDCLDEALPK 81
>pdb|3UTE|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTE|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Sulfate Complex
pdb|3UTF|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTF|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase In Reduced State
pdb|3UTG|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTG|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Udp In Reduced
State
pdb|3UTH|A Chain A, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate
Udp-Galp In Reduced State
pdb|3UTH|B Chain B, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate
Udp-Galp In Reduced State
pdb|3UTH|C Chain C, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate
Udp-Galp In Reduced State
pdb|3UTH|D Chain D, Crystal Structure Of Aspergillus Fumigatus Udp
Galactopyranose Mutase Complexed With Substrate
Udp-Galp In Reduced State
pdb|4GDC|A Chain A, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|B Chain B, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|C Chain C, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDC|D Chain D, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadph
pdb|4GDD|A Chain A, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|B Chain B, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|C Chain C, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDD|D Chain D, Crystal Strucure Of Oxidized Aspergillus Fumigatus
Udp-Galactopyranose Mutase Complexed With Nadh
pdb|4GDE|A Chain A, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|B Chain B, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|C Chain C, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
pdb|4GDE|D Chain D, Crystal Strucure Of Nadph-Reduced Aspergillus Fumigatus
Udp- Galactopyranose
Length = 513
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 19 DALVIGGGHNGLTAAAYLARA-GLSVAVLERRHVIGGAAVTEELIPGFK--------FSR 69
D LVIG G GL AA L + G S +++ GG A T+ GF FS
Sbjct: 12 DVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFSH 71
Query: 70 CSYLQSLLRPSLIK 83
Y L +L K
Sbjct: 72 YKYFDDCLDEALPK 85
>pdb|2VOU|A Chain A, Structure Of 2,6-dihydroxypyridine-3-hydroxylase From
Arthrobacter Nicotinovorans
pdb|2VOU|B Chain B, Structure Of 2,6-dihydroxypyridine-3-hydroxylase From
Arthrobacter Nicotinovorans
pdb|2VOU|C Chain C, Structure Of 2,6-dihydroxypyridine-3-hydroxylase From
Arthrobacter Nicotinovorans
Length = 397
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 22 VIGGGHNGLTAAAYLARAGLSVAVLER 48
V+GG +GLTAA L AG+ V V ER
Sbjct: 10 VVGGSISGLTAALMLRDAGVDVDVYER 36
>pdb|2FJA|A Chain A, Adenosine 5'-Phosphosulfate Reductase In Complex With
Substrate
pdb|2FJA|C Chain C, Adenosine 5'-Phosphosulfate Reductase In Complex With
Substrate
pdb|2FJB|A Chain A, Adenosine-5'-Phosphosulfate Reductase Im Complex With
Products
pdb|2FJB|C Chain C, Adenosine-5'-Phosphosulfate Reductase Im Complex With
Products
pdb|2FJD|A Chain A, Adenosine-5-Phosphosulfate Reductase In Complex With
Sulfite (Covalent Adduct)
pdb|2FJD|C Chain C, Adenosine-5-Phosphosulfate Reductase In Complex With
Sulfite (Covalent Adduct)
pdb|2FJE|A Chain A, Adenosine-5-Phosphosulfate Reductase Oxidized State
pdb|2FJE|C Chain C, Adenosine-5-Phosphosulfate Reductase Oxidized State
Length = 643
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 19 DALVIGGGHNGLTA---AAYLAR-AGLSVAVLERRHVIGGAAVTEEL 61
D L+IGGG +G A AAY A+ GL V ++E+ V AV + L
Sbjct: 24 DILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGL 70
>pdb|1JNR|A Chain A, Structure Of Adenylylsulfate Reductase From The
Hyperthermophilic Archaeoglobus Fulgidus At 1.6
Resolution
pdb|1JNR|C Chain C, Structure Of Adenylylsulfate Reductase From The
Hyperthermophilic Archaeoglobus Fulgidus At 1.6
Resolution
pdb|1JNZ|A Chain A, Structure Of Adenylylsulfate Reductase From The
Hyperthermophilic Archaeoglobus Fulgidus At 1.6
Resolution
pdb|1JNZ|C Chain C, Structure Of Adenylylsulfate Reductase From The
Hyperthermophilic Archaeoglobus Fulgidus At 1.6
Resolution
Length = 643
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 19 DALVIGGGHNGLTA---AAYLAR-AGLSVAVLERRHVIGGAAVTEEL 61
D L+IGGG +G A AAY A+ GL V ++E+ V AV + L
Sbjct: 24 DILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGL 70
>pdb|2UZZ|A Chain A, X-Ray Structure Of N-Methyl-L-Tryptophan Oxidase (Mtox)
pdb|2UZZ|B Chain B, X-Ray Structure Of N-Methyl-L-Tryptophan Oxidase (Mtox)
pdb|2UZZ|C Chain C, X-Ray Structure Of N-Methyl-L-Tryptophan Oxidase (Mtox)
pdb|2UZZ|D Chain D, X-Ray Structure Of N-Methyl-L-Tryptophan Oxidase (Mtox)
Length = 372
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 17 KWDALVIGGGHNGLTAAAYLARAGLSV 43
K+D ++IG G G A Y RAGL+V
Sbjct: 2 KYDLIIIGSGSVGAAAGYYATRAGLNV 28
>pdb|3KYH|C Chain C, Saccharomyces Cerevisiae Cet1-Ceg1 Capping Apparatus
pdb|3KYH|D Chain D, Saccharomyces Cerevisiae Cet1-Ceg1 Capping Apparatus
Length = 461
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 294 YKTFMDL---VPGNILPDDFILSIKHSDYSSGTTKINLAVDKLPQF 336
+K + DL P F +S+KH D+S K+ ++DKLP
Sbjct: 180 FKPYFDLRAAYPNRCTTFPFKISMKHMDFSYQLVKVAKSLDKLPHL 225
>pdb|3FBS|A Chain A, The Crystal Structure Of The Oxidoreductase From
Agrobacterium Tumefaciens
pdb|3FBS|B Chain B, The Crystal Structure Of The Oxidoreductase From
Agrobacterium Tumefaciens
Length = 297
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVL---ERRH 50
K+D ++IGG + GL+AA L RA ++ ++ ERR+
Sbjct: 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRN 38
>pdb|3GF4|A Chain A, Structure Of Udp-Galactopyranose Mutase Bound To
Udp-Glucose
pdb|3GF4|B Chain B, Structure Of Udp-Galactopyranose Mutase Bound To
Udp-Glucose
pdb|3INR|A Chain A, Structure Of Udp-Galactopyranose Mutase Bound To Udp-
Galactose (Oxidized)
pdb|3INR|B Chain B, Structure Of Udp-Galactopyranose Mutase Bound To Udp-
Galactose (Oxidized)
pdb|3INT|A Chain A, Structure Of Udp-Galactopyranose Mutase Bound To Udp-
Galactose (Reduced)
pdb|3INT|B Chain B, Structure Of Udp-Galactopyranose Mutase Bound To Udp-
Galactose (Reduced)
pdb|3KYB|A Chain A, Structure Of Udp-Galactopyranose Mutase Bound To Flavin
Mononucleotide
pdb|3KYB|B Chain B, Structure Of Udp-Galactopyranose Mutase Bound To Flavin
Mononucleotide
Length = 390
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 13 LKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGG 54
+K KK L++G G +G LA G V ++++R IGG
Sbjct: 1 MKSKK--ILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGG 40
>pdb|2BI7|A Chain A, Udp-Galactopyranose Mutase From Klebsiella Pneumoniae
Oxidised Fad
pdb|2BI8|A Chain A, Udp-Galactopyranose Mutase From Klebsiella Pneumoniae
With Reduced Fad
Length = 384
Score = 28.5 bits (62), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 13 LKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGG 54
+K KK L++G G +G LA G V ++++R IGG
Sbjct: 1 MKSKK--ILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGG 40
>pdb|1WAM|A Chain A, Structure Of Udp-Galactopyranose Mutase From Klebsiella
Pneumoniae With Fadh-
Length = 384
Score = 28.5 bits (62), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 13 LKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGG 54
+K KK L++G G +G LA G V ++++R IGG
Sbjct: 1 MKSKK--ILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGG 40
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,142,703
Number of Sequences: 62578
Number of extensions: 747076
Number of successful extensions: 2569
Number of sequences better than 100.0: 224
Number of HSP's better than 100.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 2339
Number of HSP's gapped (non-prelim): 278
length of query: 531
length of database: 14,973,337
effective HSP length: 103
effective length of query: 428
effective length of database: 8,527,803
effective search space: 3649899684
effective search space used: 3649899684
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)