Query 048009
Match_columns 531
No_of_seqs 267 out of 2369
Neff 10.6
Searched_HMMs 29240
Date Mon Mar 25 09:01:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048009.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048009hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dgk_A Phytoene dehydrogenase; 100.0 2E-60 6.9E-65 488.3 24.4 462 17-528 1-493 (501)
2 3ka7_A Oxidoreductase; structu 100.0 1.2E-35 4E-40 298.0 33.2 405 18-523 1-424 (425)
3 3nrn_A Uncharacterized protein 100.0 4.1E-33 1.4E-37 278.8 28.4 383 18-522 1-403 (421)
4 1s3e_A Amine oxidase [flavin-c 100.0 3.7E-31 1.3E-35 271.7 27.9 419 17-528 4-456 (520)
5 2yg5_A Putrescine oxidase; oxi 100.0 1.9E-30 6.6E-35 262.2 22.4 410 16-527 4-452 (453)
6 2ivd_A PPO, PPOX, protoporphyr 100.0 1.4E-30 4.9E-35 265.0 15.8 417 16-529 15-476 (478)
7 2vvm_A Monoamine oxidase N; FA 100.0 8.1E-29 2.8E-33 253.0 25.5 418 18-528 40-487 (495)
8 3i6d_A Protoporphyrinogen oxid 100.0 5.9E-29 2E-33 252.8 14.7 241 228-526 226-468 (470)
9 1sez_A Protoporphyrinogen oxid 100.0 9.1E-29 3.1E-33 253.3 11.1 426 16-529 12-496 (504)
10 2jae_A L-amino acid oxidase; o 100.0 1.4E-27 4.7E-32 243.5 19.5 249 227-529 229-488 (489)
11 1b37_A Protein (polyamine oxid 99.9 3.3E-27 1.1E-31 239.3 19.6 245 232-529 201-461 (472)
12 3nks_A Protoporphyrinogen oxid 99.9 4E-27 1.4E-31 239.6 19.1 243 231-526 228-474 (477)
13 3lov_A Protoporphyrinogen oxid 99.9 1.6E-27 5.3E-32 242.3 15.2 239 227-528 226-467 (475)
14 4gde_A UDP-galactopyranose mut 99.9 3E-26 1E-30 235.4 20.7 93 231-333 216-308 (513)
15 2bcg_G Secretory pathway GDP d 99.9 1.3E-25 4.5E-30 225.5 22.8 189 172-407 174-369 (453)
16 2iid_A L-amino-acid oxidase; f 99.9 9.5E-25 3.2E-29 223.1 23.4 435 16-527 32-485 (498)
17 3k7m_X 6-hydroxy-L-nicotine ox 99.9 3.5E-24 1.2E-28 214.9 26.3 394 17-525 1-425 (431)
18 1rsg_A FMS1 protein; FAD bindi 99.9 4.7E-24 1.6E-28 218.4 24.7 98 231-333 197-304 (516)
19 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 4.3E-24 1.5E-28 207.2 20.7 229 231-525 106-341 (342)
20 1d5t_A Guanine nucleotide diss 99.9 9.4E-24 3.2E-28 210.5 19.9 312 16-407 5-358 (433)
21 4dsg_A UDP-galactopyranose mut 99.9 8.2E-24 2.8E-28 213.7 19.2 235 228-523 206-452 (484)
22 2z3y_A Lysine-specific histone 99.9 1E-21 3.5E-26 205.8 25.1 249 227-528 391-660 (662)
23 2b9w_A Putative aminooxidase; 99.9 8E-22 2.7E-26 197.2 22.2 256 16-319 5-278 (424)
24 2xag_A Lysine-specific histone 99.9 3.3E-21 1.1E-25 204.1 27.5 248 227-528 562-831 (852)
25 4gut_A Lysine-specific histone 99.9 3.3E-22 1.1E-26 210.6 18.8 240 230-524 527-775 (776)
26 3ayj_A Pro-enzyme of L-phenyla 99.8 4.2E-20 1.4E-24 190.2 20.3 101 228-330 338-483 (721)
27 1yvv_A Amine oxidase, flavin-c 99.8 1.7E-18 5.9E-23 167.4 25.8 223 231-528 104-329 (336)
28 3p1w_A Rabgdi protein; GDI RAB 99.8 1.2E-18 4E-23 172.3 15.4 251 16-294 19-313 (475)
29 1vg0_A RAB proteins geranylger 99.8 3.6E-17 1.2E-21 166.2 25.0 194 169-406 310-507 (650)
30 1v0j_A UDP-galactopyranose mut 99.8 1.5E-18 5.1E-23 171.0 9.8 69 16-84 6-77 (399)
31 1i8t_A UDP-galactopyranose mut 99.7 8.2E-17 2.8E-21 156.6 17.4 66 17-83 1-67 (367)
32 2bi7_A UDP-galactopyranose mut 99.7 1.8E-16 6E-21 155.1 15.5 69 16-84 2-72 (384)
33 3dje_A Fructosyl amine: oxygen 99.6 1.3E-14 4.4E-19 145.4 15.2 64 236-302 160-226 (438)
34 2e1m_A L-glutamate oxidase; L- 99.6 7.6E-15 2.6E-19 141.2 12.4 66 16-81 43-118 (376)
35 3dme_A Conserved exported prot 99.6 2.9E-14 9.9E-19 139.5 14.5 59 236-295 149-209 (369)
36 3hdq_A UDP-galactopyranose mut 99.5 1E-14 3.6E-19 141.4 9.9 70 15-84 27-97 (397)
37 3pvc_A TRNA 5-methylaminomethy 99.5 2.4E-13 8.3E-18 143.4 17.8 62 237-302 412-474 (689)
38 3ps9_A TRNA 5-methylaminomethy 99.5 4.8E-13 1.6E-17 141.0 17.9 62 237-302 417-478 (676)
39 3nyc_A D-arginine dehydrogenas 99.5 1.2E-13 4.2E-18 135.7 11.4 56 237-295 154-209 (381)
40 2gag_B Heterotetrameric sarcos 99.4 4.6E-12 1.6E-16 125.5 19.2 57 237-295 174-230 (405)
41 3oz2_A Digeranylgeranylglycero 99.4 1.4E-12 4.8E-17 128.8 15.1 64 237-301 102-168 (397)
42 1ryi_A Glycine oxidase; flavop 99.4 1.6E-12 5.5E-17 127.7 14.7 56 237-295 164-219 (382)
43 3v76_A Flavoprotein; structura 99.4 1.4E-12 4.9E-17 128.3 14.0 62 231-295 126-187 (417)
44 1y56_B Sarcosine oxidase; dehy 99.4 2.6E-12 9.1E-17 126.2 15.7 57 237-295 149-205 (382)
45 3da1_A Glycerol-3-phosphate de 99.4 8.5E-13 2.9E-17 135.4 11.3 58 237-295 170-232 (561)
46 3o0h_A Glutathione reductase; 99.4 2.2E-13 7.4E-18 137.9 4.5 58 236-295 231-288 (484)
47 2uzz_A N-methyl-L-tryptophan o 99.3 3.1E-12 1.1E-16 125.2 11.1 61 237-302 149-209 (372)
48 2i0z_A NAD(FAD)-utilizing dehy 99.3 1.1E-11 3.8E-16 123.9 15.3 59 236-295 133-191 (447)
49 3axb_A Putative oxidoreductase 99.3 1.4E-11 4.8E-16 123.6 15.8 57 237-295 181-254 (448)
50 4at0_A 3-ketosteroid-delta4-5a 99.3 3.4E-11 1.1E-15 122.5 18.5 62 234-295 199-264 (510)
51 2gf3_A MSOX, monomeric sarcosi 99.3 9.7E-12 3.3E-16 122.4 13.9 60 237-301 150-209 (389)
52 1qo8_A Flavocytochrome C3 fuma 99.3 1.2E-11 4.1E-16 127.5 13.6 61 236-296 249-313 (566)
53 3nlc_A Uncharacterized protein 99.3 2.8E-11 9.6E-16 122.4 15.6 58 237-295 220-277 (549)
54 4dna_A Probable glutathione re 99.3 1.3E-12 4.6E-17 131.4 5.6 58 236-295 210-268 (463)
55 1y0p_A Fumarate reductase flav 99.3 4.4E-11 1.5E-15 123.5 16.7 59 237-295 255-317 (571)
56 2gqf_A Hypothetical protein HI 99.3 1.7E-11 5.7E-16 120.4 12.9 57 236-295 108-168 (401)
57 2oln_A NIKD protein; flavoprot 99.3 1.2E-11 4.1E-16 122.1 11.6 56 237-295 153-208 (397)
58 1pj5_A N,N-dimethylglycine oxi 99.3 3.7E-11 1.3E-15 129.6 16.4 57 237-295 151-207 (830)
59 2rgh_A Alpha-glycerophosphate 99.3 2E-11 6.9E-16 125.5 13.7 58 237-295 188-250 (571)
60 4b1b_A TRXR, thioredoxin reduc 99.3 1.4E-13 4.7E-18 139.5 -3.1 256 17-295 42-319 (542)
61 4ap3_A Steroid monooxygenase; 99.2 4.7E-11 1.6E-15 121.9 13.4 58 238-295 100-159 (549)
62 2qcu_A Aerobic glycerol-3-phos 99.2 2E-10 6.9E-15 116.5 17.4 58 236-295 148-210 (501)
63 1fec_A Trypanothione reductase 99.2 6.3E-13 2.1E-17 134.5 -1.2 59 236-295 230-288 (490)
64 3nix_A Flavoprotein/dehydrogen 99.2 2.5E-11 8.6E-16 120.8 9.2 66 237-302 106-173 (421)
65 3urh_A Dihydrolipoyl dehydroge 99.2 7.6E-13 2.6E-17 134.3 -2.0 49 15-63 23-71 (491)
66 3gwf_A Cyclohexanone monooxyge 99.2 6.9E-11 2.4E-15 120.4 12.4 58 238-295 88-147 (540)
67 4a9w_A Monooxygenase; baeyer-v 99.2 1.4E-10 4.7E-15 112.7 13.6 57 237-295 76-132 (357)
68 3cgv_A Geranylgeranyl reductas 99.2 2.7E-11 9.1E-16 119.6 8.6 64 237-301 102-168 (397)
69 3kkj_A Amine oxidase, flavin-c 99.2 1.6E-11 5.3E-16 115.8 6.6 55 17-72 2-56 (336)
70 3i3l_A Alkylhalidase CMLS; fla 99.2 4E-11 1.4E-15 123.2 10.0 64 237-301 128-194 (591)
71 1d4d_A Flavocytochrome C fumar 99.2 2.7E-10 9.2E-15 117.3 15.8 59 237-295 255-317 (572)
72 1mo9_A ORF3; nucleotide bindin 99.2 1.6E-11 5.3E-16 125.3 6.5 60 236-295 254-316 (523)
73 3uox_A Otemo; baeyer-villiger 99.2 1.5E-10 5E-15 118.2 13.5 49 15-64 7-55 (545)
74 3rp8_A Flavoprotein monooxygen 99.2 3E-11 1E-15 119.6 8.0 61 237-301 127-187 (407)
75 1ges_A Glutathione reductase; 99.2 1.9E-12 6.4E-17 129.7 -0.9 58 237-295 208-265 (450)
76 3alj_A 2-methyl-3-hydroxypyrid 99.2 1.5E-10 5.2E-15 113.3 12.7 61 237-302 107-167 (379)
77 2wpf_A Trypanothione reductase 99.2 1.4E-12 4.8E-17 132.1 -2.6 59 236-295 234-292 (495)
78 2cul_A Glucose-inhibited divis 99.2 2.6E-10 8.9E-15 103.2 12.7 56 238-295 69-125 (232)
79 2wdq_A Succinate dehydrogenase 99.2 6.2E-10 2.1E-14 114.6 17.0 59 237-295 143-206 (588)
80 1w4x_A Phenylacetone monooxyge 99.2 2.2E-10 7.4E-15 117.4 13.4 44 15-58 14-57 (542)
81 3fmw_A Oxygenase; mithramycin, 99.2 1.2E-10 4.2E-15 119.4 11.4 64 237-302 148-214 (570)
82 2x3n_A Probable FAD-dependent 99.1 1.7E-10 5.8E-15 113.9 11.8 65 237-302 107-173 (399)
83 2r9z_A Glutathione amide reduc 99.1 4.8E-12 1.6E-16 127.2 0.5 57 237-295 207-264 (463)
84 4fk1_A Putative thioredoxin re 99.1 2.5E-10 8.6E-15 108.1 12.3 40 15-55 4-43 (304)
85 3lad_A Dihydrolipoamide dehydr 99.1 1E-12 3.4E-17 133.0 -5.1 58 236-295 220-280 (476)
86 3f8d_A Thioredoxin reductase ( 99.1 2.7E-10 9.4E-15 108.9 12.1 55 238-295 71-125 (323)
87 2bs2_A Quinol-fumarate reducta 99.1 5.8E-10 2E-14 115.8 15.3 58 237-295 158-220 (660)
88 3ihg_A RDME; flavoenzyme, anth 99.1 2.1E-10 7.1E-15 117.7 11.8 64 237-302 120-190 (535)
89 2hqm_A GR, grase, glutathione 99.1 4.5E-12 1.6E-16 128.0 -0.6 60 236-295 225-285 (479)
90 3e1t_A Halogenase; flavoprotei 99.1 1.2E-10 4.1E-15 118.6 9.6 64 237-301 111-178 (512)
91 1rp0_A ARA6, thiazole biosynth 99.1 4.8E-10 1.6E-14 104.8 12.9 41 16-56 38-79 (284)
92 3ab1_A Ferredoxin--NADP reduct 99.1 5.1E-10 1.7E-14 108.8 13.2 57 238-295 75-131 (360)
93 2yqu_A 2-oxoglutarate dehydrog 99.1 2.5E-12 8.7E-17 129.1 -3.3 59 235-295 206-264 (455)
94 2gmh_A Electron transfer flavo 99.1 2.9E-10 9.8E-15 117.2 11.8 62 237-298 144-220 (584)
95 2zbw_A Thioredoxin reductase; 99.1 4.1E-10 1.4E-14 108.3 12.0 55 238-294 66-120 (335)
96 1onf_A GR, grase, glutathione 99.1 2.7E-11 9.1E-16 123.0 3.6 59 236-295 216-275 (500)
97 3lzw_A Ferredoxin--NADP reduct 99.1 2.9E-10 9.9E-15 109.2 10.2 55 238-294 68-122 (332)
98 2h88_A Succinate dehydrogenase 99.1 1.4E-09 4.8E-14 112.1 15.7 58 237-295 155-217 (621)
99 3ic9_A Dihydrolipoamide dehydr 99.1 7.2E-12 2.4E-16 126.8 -1.8 57 236-295 214-274 (492)
100 2vou_A 2,6-dihydroxypyridine h 99.0 5.8E-10 2E-14 109.9 10.6 61 238-302 100-160 (397)
101 2zxi_A TRNA uridine 5-carboxym 99.0 8E-10 2.7E-14 112.2 11.7 57 237-295 123-180 (637)
102 3c4n_A Uncharacterized protein 99.0 1.2E-10 4E-15 115.1 5.5 56 237-295 172-236 (405)
103 3dgh_A TRXR-1, thioredoxin red 99.0 8.7E-11 3E-15 118.8 4.6 59 236-295 226-289 (483)
104 1xdi_A RV3303C-LPDA; reductase 99.0 4.7E-11 1.6E-15 121.3 2.3 58 236-295 222-279 (499)
105 2eq6_A Pyruvate dehydrogenase 99.0 7.3E-12 2.5E-16 125.9 -3.8 58 236-295 209-271 (464)
106 3itj_A Thioredoxin reductase 1 99.0 1.1E-09 3.9E-14 105.3 11.8 55 238-295 85-142 (338)
107 2ywl_A Thioredoxin reductase r 99.0 3.1E-09 1E-13 92.1 13.3 54 238-295 57-110 (180)
108 3jsk_A Cypbp37 protein; octame 99.0 2.4E-09 8.2E-14 100.8 13.4 42 16-57 78-121 (344)
109 2qa1_A PGAE, polyketide oxygen 99.0 6.7E-10 2.3E-14 112.4 10.3 64 237-302 106-172 (500)
110 2qa2_A CABE, polyketide oxygen 99.0 3.5E-10 1.2E-14 114.4 8.1 64 237-302 107-173 (499)
111 1chu_A Protein (L-aspartate ox 99.0 1.2E-09 4E-14 111.5 12.0 57 238-295 139-208 (540)
112 3dk9_A Grase, GR, glutathione 99.0 3.1E-11 1.1E-15 122.0 0.3 60 236-295 227-293 (478)
113 4hb9_A Similarities with proba 99.0 5.5E-10 1.9E-14 110.7 9.3 60 238-301 113-172 (412)
114 3ces_A MNMG, tRNA uridine 5-ca 99.0 8.4E-10 2.9E-14 112.5 10.5 56 238-295 125-181 (651)
115 3lxd_A FAD-dependent pyridine 99.0 8.2E-09 2.8E-13 102.2 17.3 59 236-295 193-251 (415)
116 1zmd_A Dihydrolipoyl dehydroge 99.0 1.2E-11 4.1E-16 124.9 -3.4 59 236-295 219-282 (474)
117 3atr_A Conserved archaeal prot 99.0 3E-10 1E-14 113.9 6.8 65 237-302 100-169 (453)
118 1kf6_A Fumarate reductase flav 99.0 6.3E-09 2.1E-13 107.4 16.4 59 237-296 134-198 (602)
119 2bry_A NEDD9 interacting prote 99.0 2.6E-09 9E-14 107.9 13.3 60 237-296 166-231 (497)
120 2qae_A Lipoamide, dihydrolipoy 99.0 1E-11 3.4E-16 125.3 -4.5 58 236-295 214-276 (468)
121 2gjc_A Thiazole biosynthetic e 99.0 4.9E-09 1.7E-13 98.1 13.9 42 16-57 64-107 (326)
122 3dgz_A Thioredoxin reductase 2 99.0 1.2E-10 4E-15 118.0 3.1 59 236-295 224-287 (488)
123 1k0i_A P-hydroxybenzoate hydro 99.0 1.2E-09 4.2E-14 107.5 10.1 65 237-302 103-170 (394)
124 3d1c_A Flavin-containing putat 99.0 3.6E-09 1.2E-13 103.1 13.2 55 238-295 89-143 (369)
125 1lvl_A Dihydrolipoamide dehydr 99.0 1.7E-11 5.9E-16 123.0 -3.6 45 16-61 4-48 (458)
126 3cp8_A TRNA uridine 5-carboxym 99.0 1.9E-09 6.6E-14 109.8 10.6 56 238-295 118-174 (641)
127 2xdo_A TETX2 protein; tetracyc 99.0 1.2E-09 4.3E-14 107.5 9.0 60 238-301 129-188 (398)
128 3fg2_P Putative rubredoxin red 99.0 1.9E-09 6.4E-14 106.4 10.0 60 235-295 182-241 (404)
129 3qfa_A Thioredoxin reductase 1 98.9 7E-09 2.4E-13 105.6 14.4 54 6-59 20-82 (519)
130 2q0l_A TRXR, thioredoxin reduc 98.9 7.6E-09 2.6E-13 98.2 13.6 55 238-295 60-114 (311)
131 2gv8_A Monooxygenase; FMO, FAD 98.9 4.9E-09 1.7E-13 104.9 12.7 43 16-58 5-49 (447)
132 3k30_A Histamine dehydrogenase 98.9 5.6E-11 1.9E-15 125.3 -1.5 45 15-59 389-433 (690)
133 2q7v_A Thioredoxin reductase; 98.9 7.4E-09 2.5E-13 99.0 13.0 40 17-57 8-47 (325)
134 1zk7_A HGII, reductase, mercur 98.9 9.4E-11 3.2E-15 118.1 -0.4 57 236-295 215-271 (467)
135 1vdc_A NTR, NADPH dependent th 98.9 4.3E-09 1.5E-13 101.0 11.2 54 238-295 71-124 (333)
136 3c96_A Flavin-containing monoo 98.9 4.1E-09 1.4E-13 104.2 10.7 63 237-302 107-176 (410)
137 2aqj_A Tryptophan halogenase, 98.9 7.8E-09 2.7E-13 105.9 13.1 59 237-296 165-223 (538)
138 3fbs_A Oxidoreductase; structu 98.9 8E-09 2.7E-13 97.3 12.0 34 17-50 2-35 (297)
139 4a5l_A Thioredoxin reductase; 98.9 1.2E-08 4.1E-13 97.0 13.0 40 16-56 3-42 (314)
140 2e4g_A Tryptophan halogenase; 98.9 1.5E-08 5E-13 104.0 14.3 59 237-296 194-253 (550)
141 1jnr_A Adenylylsulfate reducta 98.9 3E-08 1E-12 103.3 16.8 57 238-295 152-218 (643)
142 3cty_A Thioredoxin reductase; 98.9 1.3E-08 4.3E-13 97.1 12.9 41 16-57 15-55 (319)
143 2a87_A TRXR, TR, thioredoxin r 98.9 1.2E-08 4.2E-13 97.9 12.9 41 15-56 12-52 (335)
144 1fl2_A Alkyl hydroperoxide red 98.9 1.1E-08 3.8E-13 97.0 12.4 57 239-295 58-115 (310)
145 3gyx_A Adenylylsulfate reducta 98.9 1E-08 3.5E-13 106.4 12.7 57 238-295 167-233 (662)
146 2e5v_A L-aspartate oxidase; ar 98.9 2.5E-08 8.5E-13 100.1 15.1 58 237-296 119-177 (472)
147 3l8k_A Dihydrolipoyl dehydroge 98.9 2.4E-09 8.2E-14 107.7 7.6 43 17-59 4-46 (466)
148 3s5w_A L-ornithine 5-monooxyge 98.9 9.1E-09 3.1E-13 103.6 11.5 39 16-54 29-72 (463)
149 1trb_A Thioredoxin reductase; 98.9 1.5E-08 5.1E-13 96.6 12.2 40 16-56 4-43 (320)
150 1hyu_A AHPF, alkyl hydroperoxi 98.8 2.5E-08 8.4E-13 101.5 13.8 58 238-295 268-326 (521)
151 2pyx_A Tryptophan halogenase; 98.8 4.2E-08 1.4E-12 100.2 15.5 60 237-297 175-235 (526)
152 2r0c_A REBC; flavin adenine di 98.8 4.7E-09 1.6E-13 107.6 7.9 60 238-302 139-203 (549)
153 2dkh_A 3-hydroxybenzoate hydro 98.8 1.5E-08 5.1E-13 105.8 11.7 66 237-302 141-218 (639)
154 2weu_A Tryptophan 5-halogenase 98.8 2.4E-08 8.2E-13 101.7 12.6 59 237-296 173-231 (511)
155 1dxl_A Dihydrolipoamide dehydr 98.8 3.4E-08 1.2E-12 99.5 13.4 43 16-58 5-47 (470)
156 2xve_A Flavin-containing monoo 98.8 2.9E-08 9.9E-13 99.5 12.6 41 18-58 3-49 (464)
157 3iwa_A FAD-dependent pyridine 98.8 8.5E-09 2.9E-13 103.9 7.7 59 235-295 200-258 (472)
158 1v59_A Dihydrolipoamide dehydr 98.8 1.4E-08 4.6E-13 102.6 9.1 42 17-58 5-46 (478)
159 3qvp_A Glucose oxidase; oxidor 98.8 1.5E-08 5.2E-13 103.4 9.2 53 247-301 237-298 (583)
160 4gcm_A TRXR, thioredoxin reduc 98.8 6.3E-09 2.1E-13 98.9 5.9 45 16-61 5-49 (312)
161 2a8x_A Dihydrolipoyl dehydroge 98.7 2E-08 6.7E-13 101.0 9.5 41 17-58 3-43 (464)
162 1ojt_A Surface protein; redox- 98.7 1.8E-08 6.1E-13 101.7 8.6 42 17-58 6-47 (482)
163 3oc4_A Oxidoreductase, pyridin 98.7 3.3E-08 1.1E-12 99.0 9.7 57 236-295 188-244 (452)
164 1ebd_A E3BD, dihydrolipoamide 98.7 4.2E-08 1.4E-12 98.3 10.5 41 17-58 3-43 (455)
165 3klj_A NAD(FAD)-dependent dehy 98.7 4E-08 1.4E-12 95.8 9.9 45 247-295 72-116 (385)
166 3fpz_A Thiazole biosynthetic e 98.7 8.9E-09 3E-13 98.4 4.5 43 16-58 64-108 (326)
167 3q9t_A Choline dehydrogenase a 98.6 5.4E-08 1.9E-12 99.4 8.2 52 248-301 217-275 (577)
168 3t37_A Probable dehydrogenase; 98.6 2.8E-07 9.7E-12 94.2 12.9 51 249-301 223-276 (526)
169 1y56_A Hypothetical protein PH 98.6 8.3E-08 2.8E-12 96.9 7.7 40 17-57 108-147 (493)
170 3kd9_A Coenzyme A disulfide re 98.6 1.5E-07 5.3E-12 94.0 9.4 38 16-53 2-41 (449)
171 1coy_A Cholesterol oxidase; ox 98.5 4.5E-07 1.6E-11 91.8 12.2 59 238-296 227-294 (507)
172 1n4w_A CHOD, cholesterol oxida 98.5 3.6E-07 1.2E-11 92.5 11.1 59 238-296 222-289 (504)
173 3ics_A Coenzyme A-disulfide re 98.5 2E-07 6.8E-12 96.6 9.3 39 15-53 34-74 (588)
174 1q1r_A Putidaredoxin reductase 98.5 3.8E-07 1.3E-11 90.5 9.8 45 247-295 70-114 (431)
175 3ef6_A Toluene 1,2-dioxygenase 98.5 2.4E-07 8.1E-12 91.4 8.1 44 248-295 68-111 (410)
176 4g6h_A Rotenone-insensitive NA 98.5 1.2E-06 4.2E-11 88.3 13.0 56 236-293 271-330 (502)
177 3h8l_A NADH oxidase; membrane 98.4 1.3E-07 4.5E-12 93.4 5.3 34 18-51 2-38 (409)
178 2jbv_A Choline oxidase; alcoho 98.4 1.4E-06 4.9E-11 88.9 13.1 61 240-301 211-278 (546)
179 1pn0_A Phenol 2-monooxygenase; 98.4 5.6E-07 1.9E-11 94.0 10.2 37 16-52 7-48 (665)
180 3fim_B ARYL-alcohol oxidase; A 98.4 8.6E-07 3E-11 90.3 10.9 36 17-52 2-38 (566)
181 1c0p_A D-amino acid oxidase; a 98.4 1.9E-07 6.4E-12 90.6 5.8 39 16-54 5-43 (363)
182 1q1r_A Putidaredoxin reductase 98.4 2.9E-06 1E-10 84.1 13.8 52 243-295 197-250 (431)
183 3ntd_A FAD-dependent pyridine 98.4 6.5E-07 2.2E-11 92.4 8.8 36 18-53 2-39 (565)
184 2vdc_G Glutamate synthase [NAD 98.4 3.5E-07 1.2E-11 91.0 6.2 43 15-57 120-162 (456)
185 3sx6_A Sulfide-quinone reducta 98.4 6.4E-07 2.2E-11 89.1 8.0 34 17-50 4-40 (437)
186 2v3a_A Rubredoxin reductase; a 98.3 3.1E-06 1E-10 82.7 12.5 52 242-295 192-243 (384)
187 3r9u_A Thioredoxin reductase; 98.3 2.8E-07 9.7E-12 87.4 5.0 42 16-58 3-45 (315)
188 3ef6_A Toluene 1,2-dioxygenase 98.3 3.7E-06 1.3E-10 82.8 12.1 53 241-295 189-241 (410)
189 3g3e_A D-amino-acid oxidase; F 98.3 2.9E-07 9.8E-12 88.9 3.4 50 237-302 142-191 (351)
190 3hyw_A Sulfide-quinone reducta 98.3 6.2E-07 2.1E-11 89.0 5.7 43 248-295 67-109 (430)
191 2gqw_A Ferredoxin reductase; f 98.2 1.1E-05 3.7E-10 79.3 12.8 47 243-295 193-239 (408)
192 1o94_A Tmadh, trimethylamine d 98.2 9.1E-07 3.1E-11 93.6 5.3 45 15-59 387-431 (729)
193 2cdu_A NADPH oxidase; flavoenz 98.2 1E-05 3.5E-10 80.8 12.3 52 242-295 196-247 (452)
194 3c4a_A Probable tryptophan hyd 98.2 1.3E-06 4.3E-11 85.4 5.3 35 18-52 1-37 (381)
195 3ihm_A Styrene monooxygenase A 98.2 9E-07 3.1E-11 87.8 4.1 34 17-50 22-55 (430)
196 1nhp_A NADH peroxidase; oxidor 98.1 1.5E-05 5E-10 79.6 12.5 51 242-295 196-246 (447)
197 3g5s_A Methylenetetrahydrofola 98.1 2.1E-06 7.3E-11 81.2 5.8 41 17-57 1-41 (443)
198 3pl8_A Pyranose 2-oxidase; sub 98.1 1.5E-06 5.2E-11 89.9 5.1 41 17-57 46-86 (623)
199 4b63_A L-ornithine N5 monooxyg 98.1 5.1E-06 1.7E-10 83.9 8.9 40 16-55 38-77 (501)
200 1v59_A Dihydrolipoamide dehydr 98.1 1.4E-05 4.9E-10 80.4 11.7 35 17-51 183-217 (478)
201 2bc0_A NADH oxidase; flavoprot 98.1 1.8E-05 6.1E-10 79.9 12.3 50 243-295 242-291 (490)
202 1ebd_A E3BD, dihydrolipoamide 98.1 1.3E-05 4.6E-10 80.0 11.0 35 17-51 170-204 (455)
203 1lqt_A FPRA; NADP+ derivative, 98.1 1.8E-06 6.2E-11 86.0 3.7 42 16-57 2-50 (456)
204 1ojt_A Surface protein; redox- 98.0 1.5E-05 5.1E-10 80.3 10.3 51 243-295 232-286 (482)
205 2a8x_A Dihydrolipoyl dehydroge 98.0 3.3E-05 1.1E-09 77.4 12.5 51 243-295 218-271 (464)
206 1ps9_A 2,4-dienoyl-COA reducta 98.0 3E-06 1E-10 89.0 4.9 43 16-58 372-414 (671)
207 1xhc_A NADH oxidase /nitrite r 98.0 2E-05 7E-10 76.1 10.3 34 18-51 144-177 (367)
208 3ntd_A FAD-dependent pyridine 98.0 4.8E-05 1.7E-09 78.3 13.0 35 17-51 151-185 (565)
209 2gag_A Heterotetrameric sarcos 98.0 3.9E-06 1.3E-10 91.5 5.0 41 17-57 128-168 (965)
210 1m6i_A Programmed cell death p 98.0 4.6E-05 1.6E-09 76.8 12.5 51 243-295 232-282 (493)
211 2x8g_A Thioredoxin glutathione 98.0 4.3E-06 1.5E-10 86.7 4.7 44 15-58 105-156 (598)
212 1trb_A Thioredoxin reductase; 98.0 5.9E-05 2E-09 71.4 12.4 50 245-295 192-247 (320)
213 1gte_A Dihydropyrimidine dehyd 97.9 5.8E-06 2E-10 90.8 5.4 42 16-57 186-228 (1025)
214 1cjc_A Protein (adrenodoxin re 97.9 5.2E-06 1.8E-10 82.8 4.6 42 16-57 5-48 (460)
215 1dxl_A Dihydrolipoamide dehydr 97.9 3.4E-05 1.2E-09 77.4 10.6 35 17-51 177-211 (470)
216 3cgb_A Pyridine nucleotide-dis 97.9 5.2E-05 1.8E-09 76.2 11.5 50 243-295 233-282 (480)
217 3ics_A Coenzyme A-disulfide re 97.9 7.4E-05 2.5E-09 77.3 12.6 48 243-294 234-281 (588)
218 4eqs_A Coenzyme A disulfide re 97.9 3.8E-05 1.3E-09 76.1 9.8 47 243-295 194-240 (437)
219 2bc0_A NADH oxidase; flavoprot 97.9 1E-05 3.6E-10 81.6 5.5 37 17-53 35-74 (490)
220 3h28_A Sulfide-quinone reducta 97.9 6.8E-06 2.3E-10 81.5 4.0 38 18-55 3-42 (430)
221 3gwf_A Cyclohexanone monooxyge 97.9 9.3E-05 3.2E-09 75.2 12.3 35 17-51 178-212 (540)
222 2gqw_A Ferredoxin reductase; f 97.8 1.4E-05 4.7E-10 78.6 5.4 37 16-52 6-44 (408)
223 1kdg_A CDH, cellobiose dehydro 97.8 1.2E-05 4E-10 82.5 5.0 73 240-314 198-280 (546)
224 2cdu_A NADPH oxidase; flavoenz 97.8 1.2E-05 4.1E-10 80.3 4.9 36 18-53 1-38 (452)
225 3uox_A Otemo; baeyer-villiger 97.8 0.00019 6.6E-09 73.0 13.8 35 17-51 185-219 (545)
226 1ju2_A HydroxynitrIle lyase; f 97.8 6.4E-06 2.2E-10 83.8 2.8 37 16-53 25-61 (536)
227 1nhp_A NADH peroxidase; oxidor 97.8 1.5E-05 5.1E-10 79.5 4.6 36 18-53 1-38 (447)
228 3cgb_A Pyridine nucleotide-dis 97.8 1.8E-05 6.1E-10 79.6 5.0 37 17-53 36-74 (480)
229 1m6i_A Programmed cell death p 97.7 1.5E-05 5.3E-10 80.3 4.3 38 16-53 10-49 (493)
230 2v3a_A Rubredoxin reductase; a 97.7 2.5E-05 8.4E-10 76.2 5.0 34 17-50 4-39 (384)
231 2zbw_A Thioredoxin reductase; 97.7 0.00024 8.3E-09 67.6 11.7 48 246-295 200-252 (335)
232 1xhc_A NADH oxidase /nitrite r 97.7 2.4E-05 8.1E-10 75.7 4.3 52 237-295 183-234 (367)
233 4eqs_A Coenzyme A disulfide re 97.7 3E-05 1E-09 76.9 5.0 35 18-52 1-37 (437)
234 3ab1_A Ferredoxin--NADP reduct 97.6 0.00018 6E-09 69.4 9.9 48 247-295 212-263 (360)
235 1gpe_A Protein (glucose oxidas 97.6 3.6E-05 1.2E-09 79.1 5.1 40 13-52 20-60 (587)
236 4ap3_A Steroid monooxygenase; 97.6 0.0007 2.4E-08 68.9 13.3 35 17-51 191-225 (549)
237 3itj_A Thioredoxin reductase 1 97.6 0.00034 1.1E-08 66.6 10.5 45 250-295 222-271 (338)
238 3s5w_A L-ornithine 5-monooxyge 97.5 0.0013 4.6E-08 65.6 14.5 35 17-51 227-263 (463)
239 3d1c_A Flavin-containing putat 97.5 0.00064 2.2E-08 65.6 11.8 53 241-295 218-272 (369)
240 3cty_A Thioredoxin reductase; 97.5 0.00068 2.3E-08 64.0 11.0 46 249-295 202-252 (319)
241 3vrd_B FCCB subunit, flavocyto 97.4 8.1E-05 2.8E-09 73.0 4.6 52 239-292 204-255 (401)
242 3r9u_A Thioredoxin reductase; 97.4 0.00086 2.9E-08 63.0 11.1 46 248-294 194-243 (315)
243 3kd9_A Coenzyme A disulfide re 97.4 0.00071 2.4E-08 67.3 10.7 35 17-51 148-182 (449)
244 1fl2_A Alkyl hydroperoxide red 97.4 0.001 3.5E-08 62.4 11.1 35 17-51 144-178 (310)
245 2x8g_A Thioredoxin glutathione 97.3 0.0017 5.9E-08 67.1 12.7 32 18-49 287-318 (598)
246 2q0l_A TRXR, thioredoxin reduc 97.3 0.0015 5E-08 61.4 11.1 35 17-51 143-177 (311)
247 1vdc_A NTR, NADPH dependent th 97.2 0.002 6.9E-08 61.1 10.9 35 17-51 159-193 (333)
248 3l8k_A Dihydrolipoyl dehydroge 97.2 0.0022 7.6E-08 64.0 11.5 35 17-51 172-206 (466)
249 2q7v_A Thioredoxin reductase; 97.1 0.0027 9.1E-08 60.0 11.1 34 17-50 152-185 (325)
250 3qfa_A Thioredoxin reductase 1 97.1 0.0037 1.3E-07 63.2 12.2 33 17-49 210-242 (519)
251 1hyu_A AHPF, alkyl hydroperoxi 97.0 0.0029 9.9E-08 64.1 10.5 35 17-51 355-389 (521)
252 3f8d_A Thioredoxin reductase ( 96.9 0.0053 1.8E-07 57.7 10.8 35 16-50 153-187 (323)
253 3lzw_A Ferredoxin--NADP reduct 96.9 0.0028 9.7E-08 59.9 8.9 35 17-51 154-188 (332)
254 3fbs_A Oxidoreductase; structu 96.9 0.0024 8.4E-08 59.3 8.1 32 17-49 141-172 (297)
255 2e1m_C L-glutamate oxidase; L- 96.9 7.1E-05 2.4E-09 63.9 -2.3 38 491-528 114-154 (181)
256 2gag_A Heterotetrameric sarcos 96.6 0.0036 1.2E-07 68.2 8.2 33 18-50 285-317 (965)
257 1w4x_A Phenylacetone monooxyge 96.6 0.038 1.3E-06 56.2 15.0 35 17-51 186-220 (542)
258 1o94_A Tmadh, trimethylamine d 96.5 0.0036 1.2E-07 66.2 7.0 34 17-50 528-563 (729)
259 1f0y_A HCDH, L-3-hydroxyacyl-C 96.4 0.0028 9.4E-08 59.2 5.2 38 13-50 11-48 (302)
260 2g1u_A Hypothetical protein TM 96.4 0.0032 1.1E-07 52.2 4.8 37 15-51 17-53 (155)
261 1lss_A TRK system potassium up 96.4 0.0031 1E-07 51.1 4.6 34 17-50 4-37 (140)
262 3klj_A NAD(FAD)-dependent dehy 96.4 0.0028 9.5E-08 61.4 5.0 38 17-54 146-183 (385)
263 1gte_A Dihydropyrimidine dehyd 96.3 0.012 4.2E-07 64.6 10.4 33 18-50 333-366 (1025)
264 3k96_A Glycerol-3-phosphate de 96.3 0.0038 1.3E-07 59.5 5.2 44 7-50 19-62 (356)
265 3fwz_A Inner membrane protein 96.2 0.0066 2.3E-07 49.2 5.7 35 17-51 7-41 (140)
266 4gcm_A TRXR, thioredoxin reduc 96.1 0.0037 1.3E-07 58.7 4.3 35 17-51 145-179 (312)
267 1id1_A Putative potassium chan 96.1 0.0071 2.4E-07 49.9 5.5 35 16-50 2-36 (153)
268 4huj_A Uncharacterized protein 96.1 0.0031 1.1E-07 55.8 3.4 49 2-50 7-57 (220)
269 3llv_A Exopolyphosphatase-rela 96.1 0.0069 2.4E-07 49.1 5.1 34 17-50 6-39 (141)
270 1lvl_A Dihydrolipoamide dehydr 96.0 0.005 1.7E-07 61.3 4.7 36 17-52 171-206 (458)
271 2eq6_A Pyruvate dehydrogenase 95.9 0.0059 2E-07 60.9 4.9 37 17-53 169-205 (464)
272 1pzg_A LDH, lactate dehydrogen 95.9 0.0076 2.6E-07 56.8 5.3 38 13-50 5-43 (331)
273 2yqu_A 2-oxoglutarate dehydrog 95.9 0.0065 2.2E-07 60.4 4.9 36 17-52 167-202 (455)
274 3ado_A Lambda-crystallin; L-gu 95.9 0.0061 2.1E-07 56.7 4.3 34 17-50 6-39 (319)
275 3ic5_A Putative saccharopine d 95.8 0.0075 2.6E-07 47.0 4.1 34 17-50 5-39 (118)
276 1ps9_A 2,4-dienoyl-COA reducta 95.8 0.021 7.1E-07 59.8 8.6 48 243-295 579-628 (671)
277 2dpo_A L-gulonate 3-dehydrogen 95.6 0.01 3.4E-07 55.6 4.9 34 17-50 6-39 (319)
278 1ges_A Glutathione reductase; 95.6 0.0098 3.4E-07 59.0 4.9 36 17-52 167-202 (450)
279 4a5l_A Thioredoxin reductase; 95.6 0.01 3.4E-07 55.6 4.7 35 17-51 152-186 (314)
280 4e12_A Diketoreductase; oxidor 95.5 0.013 4.3E-07 54.1 5.1 34 17-50 4-37 (283)
281 3lk7_A UDP-N-acetylmuramoylala 95.5 0.013 4.3E-07 58.1 5.2 34 17-50 9-42 (451)
282 3c85_A Putative glutathione-re 95.4 0.018 6E-07 49.1 5.2 34 17-50 39-73 (183)
283 3tl2_A Malate dehydrogenase; c 95.4 0.015 5.2E-07 54.1 5.1 37 13-49 4-41 (315)
284 2r9z_A Glutathione amide reduc 95.4 0.013 4.4E-07 58.4 4.9 36 17-52 166-201 (463)
285 4dll_A 2-hydroxy-3-oxopropiona 95.3 0.016 5.5E-07 54.4 5.1 35 16-50 30-64 (320)
286 2x5o_A UDP-N-acetylmuramoylala 95.3 0.012 3.9E-07 58.2 4.1 38 17-54 5-42 (439)
287 2hmt_A YUAA protein; RCK, KTN, 95.3 0.017 5.7E-07 46.8 4.5 33 18-50 7-39 (144)
288 3l4b_C TRKA K+ channel protien 95.2 0.015 5.1E-07 51.2 4.2 33 18-50 1-33 (218)
289 3ghy_A Ketopantoate reductase 95.2 0.019 6.7E-07 54.3 5.3 33 17-49 3-35 (335)
290 3dtt_A NADP oxidoreductase; st 95.1 0.018 6.2E-07 51.7 4.7 36 15-50 17-52 (245)
291 3ic9_A Dihydrolipoamide dehydr 95.1 0.019 6.5E-07 57.6 5.3 37 17-53 174-210 (492)
292 2y0c_A BCEC, UDP-glucose dehyd 95.1 0.017 5.8E-07 57.4 4.9 35 16-50 7-41 (478)
293 1zmd_A Dihydrolipoyl dehydroge 95.1 0.017 5.8E-07 57.7 4.9 38 17-54 178-215 (474)
294 3k6j_A Protein F01G10.3, confi 95.1 0.022 7.7E-07 55.7 5.6 36 16-51 53-88 (460)
295 3i83_A 2-dehydropantoate 2-red 95.1 0.019 6.5E-07 53.9 4.9 33 18-50 3-35 (320)
296 2raf_A Putative dinucleotide-b 95.1 0.022 7.7E-07 49.7 5.0 35 17-51 19-53 (209)
297 2ew2_A 2-dehydropantoate 2-red 95.1 0.018 6.1E-07 54.0 4.7 34 17-50 3-36 (316)
298 3hn2_A 2-dehydropantoate 2-red 95.1 0.02 6.8E-07 53.6 4.9 33 18-50 3-35 (312)
299 3g79_A NDP-N-acetyl-D-galactos 95.1 0.021 7.2E-07 56.3 5.3 36 16-51 17-54 (478)
300 1zej_A HBD-9, 3-hydroxyacyl-CO 95.0 0.02 6.8E-07 52.7 4.7 34 16-50 11-44 (293)
301 3doj_A AT3G25530, dehydrogenas 95.0 0.022 7.6E-07 53.2 5.0 36 16-51 20-55 (310)
302 1ks9_A KPA reductase;, 2-dehyd 95.0 0.023 8E-07 52.5 5.0 34 18-51 1-34 (291)
303 3g0o_A 3-hydroxyisobutyrate de 94.9 0.022 7.7E-07 53.0 4.9 35 16-50 6-40 (303)
304 2qyt_A 2-dehydropantoate 2-red 94.9 0.015 5.2E-07 54.5 3.6 36 13-48 4-45 (317)
305 2uyy_A N-PAC protein; long-cha 94.9 0.029 1E-06 52.6 5.5 35 16-50 29-63 (316)
306 4a7p_A UDP-glucose dehydrogena 94.9 0.025 8.5E-07 55.4 5.1 36 16-51 7-42 (446)
307 2hqm_A GR, grase, glutathione 94.8 0.023 7.8E-07 56.8 4.9 36 17-52 185-220 (479)
308 3mog_A Probable 3-hydroxybutyr 94.8 0.027 9.3E-07 55.9 5.3 34 17-50 5-38 (483)
309 2e1m_B L-glutamate oxidase; L- 94.8 0.034 1.2E-06 43.8 4.8 51 281-333 5-55 (130)
310 4e21_A 6-phosphogluconate dehy 94.8 0.025 8.7E-07 53.8 4.9 36 15-50 20-55 (358)
311 4dio_A NAD(P) transhydrogenase 94.8 0.029 9.8E-07 53.7 5.2 36 16-51 189-224 (405)
312 1onf_A GR, grase, glutathione 94.7 0.023 7.7E-07 57.2 4.6 37 17-53 176-212 (500)
313 3qha_A Putative oxidoreductase 94.7 0.026 8.7E-07 52.4 4.6 35 17-51 15-49 (296)
314 1lld_A L-lactate dehydrogenase 94.7 0.028 9.6E-07 52.8 4.9 34 17-50 7-42 (319)
315 1bg6_A N-(1-D-carboxylethyl)-L 94.6 0.028 9.7E-07 53.7 4.9 34 17-50 4-37 (359)
316 3gg2_A Sugar dehydrogenase, UD 94.6 0.028 9.5E-07 55.4 4.7 33 18-50 3-35 (450)
317 3eag_A UDP-N-acetylmuramate:L- 94.6 0.035 1.2E-06 52.2 5.2 35 17-51 4-39 (326)
318 1zk7_A HGII, reductase, mercur 94.6 0.03 1E-06 55.8 5.0 36 17-52 176-211 (467)
319 2qae_A Lipoamide, dihydrolipoy 94.5 0.03 1E-06 55.8 4.9 37 17-53 174-210 (468)
320 3g17_A Similar to 2-dehydropan 94.5 0.026 8.8E-07 52.3 4.1 33 18-50 3-35 (294)
321 1zcj_A Peroxisomal bifunctiona 94.5 0.031 1.1E-06 55.3 4.8 35 16-50 36-70 (463)
322 3pef_A 6-phosphogluconate dehy 94.5 0.033 1.1E-06 51.4 4.7 34 18-51 2-35 (287)
323 3fg2_P Putative rubredoxin red 94.4 0.035 1.2E-06 54.1 5.0 37 17-53 142-178 (404)
324 3pdu_A 3-hydroxyisobutyrate de 94.4 0.032 1.1E-06 51.4 4.6 34 18-51 2-35 (287)
325 3p2y_A Alanine dehydrogenase/p 94.4 0.032 1.1E-06 52.9 4.5 34 17-50 184-217 (381)
326 3gvi_A Malate dehydrogenase; N 94.4 0.041 1.4E-06 51.4 5.1 36 15-50 5-41 (324)
327 3h8l_A NADH oxidase; membrane 94.4 0.055 1.9E-06 52.8 6.4 52 237-294 218-269 (409)
328 3lxd_A FAD-dependent pyridine 94.4 0.034 1.2E-06 54.4 4.8 37 17-53 152-188 (415)
329 2xve_A Flavin-containing monoo 94.3 0.036 1.2E-06 55.1 4.9 35 17-51 197-231 (464)
330 1z82_A Glycerol-3-phosphate de 94.3 0.038 1.3E-06 52.2 4.9 34 17-50 14-47 (335)
331 3pid_A UDP-glucose 6-dehydroge 94.3 0.035 1.2E-06 53.9 4.6 35 15-50 34-68 (432)
332 3l6d_A Putative oxidoreductase 94.3 0.056 1.9E-06 50.3 5.9 34 17-50 9-42 (306)
333 3qsg_A NAD-binding phosphogluc 94.2 0.035 1.2E-06 51.9 4.4 35 16-50 23-58 (312)
334 2vns_A Metalloreductase steap3 94.2 0.047 1.6E-06 47.8 4.9 35 16-50 27-61 (215)
335 2ewd_A Lactate dehydrogenase,; 94.2 0.042 1.4E-06 51.4 4.9 34 17-50 4-38 (317)
336 3dfu_A Uncharacterized protein 94.2 0.018 6.1E-07 50.7 2.1 34 16-49 5-38 (232)
337 3urh_A Dihydrolipoyl dehydroge 94.2 0.035 1.2E-06 55.7 4.6 36 17-52 198-233 (491)
338 2hjr_A Malate dehydrogenase; m 94.2 0.048 1.6E-06 51.2 5.2 33 18-50 15-48 (328)
339 4g65_A TRK system potassium up 94.1 0.019 6.6E-07 56.7 2.5 36 16-51 2-37 (461)
340 1mv8_A GMD, GDP-mannose 6-dehy 94.1 0.038 1.3E-06 54.3 4.6 33 18-50 1-33 (436)
341 2a87_A TRXR, TR, thioredoxin r 94.1 0.036 1.2E-06 52.4 4.3 36 17-52 155-190 (335)
342 3dk9_A Grase, GR, glutathione 94.1 0.041 1.4E-06 55.0 4.9 36 17-52 187-222 (478)
343 3dfz_A SIRC, precorrin-2 dehyd 94.1 0.054 1.9E-06 47.3 5.0 34 16-49 30-63 (223)
344 2v6b_A L-LDH, L-lactate dehydr 94.1 0.045 1.5E-06 50.8 4.7 33 18-50 1-35 (304)
345 3vtf_A UDP-glucose 6-dehydroge 94.1 0.052 1.8E-06 52.8 5.3 36 15-50 19-54 (444)
346 3hwr_A 2-dehydropantoate 2-red 94.0 0.044 1.5E-06 51.4 4.7 34 16-50 18-51 (318)
347 2a9f_A Putative malic enzyme ( 94.0 0.042 1.5E-06 52.0 4.4 35 16-50 187-222 (398)
348 2h78_A Hibadh, 3-hydroxyisobut 94.0 0.048 1.7E-06 50.7 4.8 34 17-50 3-36 (302)
349 1t2d_A LDH-P, L-lactate dehydr 94.0 0.057 2E-06 50.5 5.3 34 17-50 4-38 (322)
350 2wpf_A Trypanothione reductase 93.9 0.042 1.4E-06 55.1 4.4 36 17-52 191-229 (495)
351 4gwg_A 6-phosphogluconate dehy 93.9 0.06 2.1E-06 53.2 5.4 35 16-50 3-37 (484)
352 3oc4_A Oxidoreductase, pyridin 93.9 0.048 1.6E-06 54.0 4.8 36 17-52 147-182 (452)
353 2gv8_A Monooxygenase; FMO, FAD 93.8 0.047 1.6E-06 54.0 4.7 36 17-52 212-248 (447)
354 1y6j_A L-lactate dehydrogenase 93.8 0.059 2E-06 50.3 5.0 35 16-50 6-42 (318)
355 1evy_A Glycerol-3-phosphate de 93.8 0.032 1.1E-06 53.5 3.4 32 19-50 17-48 (366)
356 3ego_A Probable 2-dehydropanto 93.7 0.055 1.9E-06 50.4 4.7 32 18-50 3-34 (307)
357 1txg_A Glycerol-3-phosphate de 93.7 0.046 1.6E-06 51.6 4.3 31 18-48 1-31 (335)
358 1kyq_A Met8P, siroheme biosynt 93.7 0.04 1.4E-06 49.9 3.5 35 16-50 12-46 (274)
359 1fec_A Trypanothione reductase 93.7 0.047 1.6E-06 54.7 4.4 36 17-52 187-225 (490)
360 1kdg_A CDH, cellobiose dehydro 93.7 0.11 3.6E-06 52.9 7.1 37 16-52 6-42 (546)
361 2rcy_A Pyrroline carboxylate r 93.7 0.065 2.2E-06 48.5 5.0 35 17-51 4-42 (262)
362 2o3j_A UDP-glucose 6-dehydroge 93.7 0.058 2E-06 53.7 5.0 34 17-50 9-44 (481)
363 1mo9_A ORF3; nucleotide bindin 93.6 0.058 2E-06 54.5 5.0 36 18-53 215-250 (523)
364 1vl6_A Malate oxidoreductase; 93.6 0.056 1.9E-06 51.1 4.5 34 16-49 191-225 (388)
365 1guz_A Malate dehydrogenase; o 93.6 0.062 2.1E-06 50.1 4.8 33 18-50 1-35 (310)
366 3pqe_A L-LDH, L-lactate dehydr 93.6 0.063 2.2E-06 50.2 4.8 35 16-50 4-40 (326)
367 3p7m_A Malate dehydrogenase; p 93.6 0.077 2.6E-06 49.5 5.3 35 16-50 4-39 (321)
368 1xdi_A RV3303C-LPDA; reductase 93.5 0.067 2.3E-06 53.7 5.3 37 17-53 182-218 (499)
369 3lad_A Dihydrolipoamide dehydr 93.5 0.06 2.1E-06 53.7 4.8 36 17-52 180-215 (476)
370 2izz_A Pyrroline-5-carboxylate 93.5 0.071 2.4E-06 50.0 5.0 36 15-50 20-59 (322)
371 3tri_A Pyrroline-5-carboxylate 93.5 0.088 3E-06 48.2 5.5 35 16-50 2-39 (280)
372 4ezb_A Uncharacterized conserv 93.5 0.047 1.6E-06 51.1 3.7 34 17-50 24-58 (317)
373 4b1b_A TRXR, thioredoxin reduc 93.4 0.088 3E-06 53.2 5.8 35 17-51 223-257 (542)
374 3oj0_A Glutr, glutamyl-tRNA re 93.4 0.029 9.9E-07 45.6 1.9 34 17-50 21-54 (144)
375 3c24_A Putative oxidoreductase 93.3 0.089 3E-06 48.4 5.4 33 18-50 12-45 (286)
376 1dlj_A UDP-glucose dehydrogena 93.3 0.054 1.8E-06 52.5 3.9 32 18-50 1-32 (402)
377 2vdc_G Glutamate synthase [NAD 93.2 0.082 2.8E-06 52.3 5.2 35 17-51 264-299 (456)
378 3l9w_A Glutathione-regulated p 93.2 0.083 2.8E-06 51.3 5.1 36 16-51 3-38 (413)
379 1jay_A Coenzyme F420H2:NADP+ o 93.2 0.073 2.5E-06 46.4 4.3 31 19-49 2-33 (212)
380 1x13_A NAD(P) transhydrogenase 93.2 0.079 2.7E-06 51.2 4.8 34 17-50 172-205 (401)
381 1x0v_A GPD-C, GPDH-C, glycerol 93.1 0.047 1.6E-06 52.1 3.2 35 17-51 8-49 (354)
382 1a5z_A L-lactate dehydrogenase 93.1 0.072 2.5E-06 49.8 4.4 33 18-50 1-35 (319)
383 3dgz_A Thioredoxin reductase 2 93.1 0.09 3.1E-06 52.6 5.3 34 17-50 185-218 (488)
384 2zyd_A 6-phosphogluconate dehy 93.1 0.079 2.7E-06 52.6 4.8 36 15-50 13-48 (480)
385 2wtb_A MFP2, fatty acid multif 93.1 0.085 2.9E-06 55.3 5.2 34 17-50 312-345 (725)
386 4gbj_A 6-phosphogluconate dehy 93.1 0.068 2.3E-06 49.4 4.1 34 18-51 6-39 (297)
387 2gf2_A Hibadh, 3-hydroxyisobut 93.0 0.096 3.3E-06 48.4 5.1 33 18-50 1-33 (296)
388 1yqg_A Pyrroline-5-carboxylate 93.0 0.079 2.7E-06 48.0 4.4 33 18-50 1-34 (263)
389 2p4q_A 6-phosphogluconate dehy 93.0 0.097 3.3E-06 52.2 5.3 34 17-50 10-43 (497)
390 3ktd_A Prephenate dehydrogenas 93.0 0.11 3.8E-06 48.9 5.4 34 17-50 8-41 (341)
391 3ggo_A Prephenate dehydrogenas 93.0 0.11 3.6E-06 48.5 5.3 34 17-50 33-68 (314)
392 1hyh_A L-hicdh, L-2-hydroxyiso 93.0 0.081 2.8E-06 49.3 4.5 33 18-50 2-36 (309)
393 1ur5_A Malate dehydrogenase; o 92.9 0.1 3.4E-06 48.6 5.0 33 18-50 3-36 (309)
394 2f1k_A Prephenate dehydrogenas 92.9 0.094 3.2E-06 48.0 4.7 33 18-50 1-33 (279)
395 1l7d_A Nicotinamide nucleotide 92.8 0.1 3.5E-06 50.2 5.1 36 16-51 171-206 (384)
396 3iwa_A FAD-dependent pyridine 92.8 0.083 2.8E-06 52.6 4.6 36 17-52 159-195 (472)
397 1oju_A MDH, malate dehydrogena 92.8 0.089 3E-06 48.4 4.4 33 18-50 1-35 (294)
398 2q3e_A UDP-glucose 6-dehydroge 92.7 0.088 3E-06 52.2 4.6 34 17-50 5-40 (467)
399 2pgd_A 6-phosphogluconate dehy 92.7 0.11 3.8E-06 51.7 5.3 33 18-50 3-35 (482)
400 1yj8_A Glycerol-3-phosphate de 92.7 0.084 2.9E-06 50.8 4.3 34 18-51 22-62 (375)
401 1nyt_A Shikimate 5-dehydrogena 92.6 0.12 4.1E-06 47.1 5.0 34 17-50 119-152 (271)
402 3cky_A 2-hydroxymethyl glutara 92.6 0.11 3.7E-06 48.2 4.9 34 17-50 4-37 (301)
403 2pv7_A T-protein [includes: ch 92.6 0.11 3.8E-06 48.0 4.9 33 18-50 22-55 (298)
404 3phh_A Shikimate dehydrogenase 92.6 0.13 4.4E-06 46.4 5.0 35 17-51 118-152 (269)
405 2i6t_A Ubiquitin-conjugating e 92.5 0.1 3.6E-06 48.2 4.5 35 17-51 14-50 (303)
406 1y56_A Hypothetical protein PH 92.5 0.17 5.8E-06 50.6 6.4 49 245-295 265-313 (493)
407 2iz1_A 6-phosphogluconate dehy 92.5 0.13 4.3E-06 51.2 5.4 34 17-50 5-38 (474)
408 2cvz_A Dehydrogenase, 3-hydrox 92.5 0.11 3.7E-06 47.9 4.6 32 18-50 2-33 (289)
409 3gpi_A NAD-dependent epimerase 92.5 0.14 4.7E-06 47.0 5.3 35 17-51 3-37 (286)
410 2ahr_A Putative pyrroline carb 92.5 0.098 3.4E-06 47.3 4.3 34 17-50 3-36 (259)
411 1pgj_A 6PGDH, 6-PGDH, 6-phosph 92.5 0.12 4.1E-06 51.4 5.1 33 18-50 2-34 (478)
412 3d1l_A Putative NADP oxidoredu 92.5 0.1 3.5E-06 47.4 4.3 34 17-50 10-44 (266)
413 1pjc_A Protein (L-alanine dehy 92.4 0.1 3.5E-06 49.8 4.5 33 18-50 168-200 (361)
414 3ojo_A CAP5O; rossmann fold, c 92.4 0.1 3.5E-06 50.7 4.5 33 18-50 12-44 (431)
415 2qrj_A Saccharopine dehydrogen 92.4 0.1 3.5E-06 49.6 4.3 40 16-55 213-257 (394)
416 1yb4_A Tartronic semialdehyde 92.3 0.086 3E-06 48.7 3.8 33 17-50 3-35 (295)
417 1vpd_A Tartronate semialdehyde 92.3 0.11 3.9E-06 48.0 4.6 33 18-50 6-38 (299)
418 3nep_X Malate dehydrogenase; h 92.3 0.12 4E-06 48.1 4.5 33 18-50 1-35 (314)
419 1wdk_A Fatty oxidation complex 92.3 0.11 3.8E-06 54.3 4.9 35 16-50 313-347 (715)
420 3fi9_A Malate dehydrogenase; s 92.3 0.16 5.5E-06 47.7 5.5 35 15-49 6-43 (343)
421 4dna_A Probable glutathione re 92.3 0.12 4.1E-06 51.3 4.9 36 17-52 170-205 (463)
422 3kkj_A Amine oxidase, flavin-c 92.3 0.04 1.4E-06 50.2 1.4 38 491-529 291-330 (336)
423 3o0h_A Glutathione reductase; 92.2 0.12 4.1E-06 51.6 4.9 36 17-52 191-226 (484)
424 2g5c_A Prephenate dehydrogenas 92.2 0.14 4.7E-06 47.0 4.9 33 18-50 2-36 (281)
425 3ldh_A Lactate dehydrogenase; 92.2 0.16 5.6E-06 47.2 5.4 35 16-50 20-56 (330)
426 3gt0_A Pyrroline-5-carboxylate 92.1 0.16 5.4E-06 45.5 5.1 33 18-50 3-39 (247)
427 4aj2_A L-lactate dehydrogenase 92.1 0.16 5.6E-06 47.4 5.3 35 15-49 17-53 (331)
428 3h28_A Sulfide-quinone reducta 92.0 0.11 3.9E-06 50.9 4.3 50 237-292 200-253 (430)
429 3dgh_A TRXR-1, thioredoxin red 92.0 0.14 4.8E-06 51.1 5.0 33 17-49 187-219 (483)
430 4ffl_A PYLC; amino acid, biosy 91.9 0.15 5E-06 48.8 4.9 34 18-51 2-35 (363)
431 1jw9_B Molybdopterin biosynthe 91.9 0.14 4.7E-06 46.0 4.3 34 17-50 31-65 (249)
432 2eez_A Alanine dehydrogenase; 91.8 0.15 5.2E-06 48.8 4.9 34 17-50 166-199 (369)
433 3d0o_A L-LDH 1, L-lactate dehy 91.8 0.16 5.3E-06 47.5 4.7 35 15-49 4-40 (317)
434 1cjc_A Protein (adrenodoxin re 91.6 0.12 4.2E-06 51.1 4.1 46 250-295 270-333 (460)
435 1p77_A Shikimate 5-dehydrogena 91.6 0.12 4.2E-06 47.0 3.8 34 17-50 119-152 (272)
436 3e8x_A Putative NAD-dependent 91.6 0.16 5.6E-06 45.0 4.6 35 16-50 20-55 (236)
437 1i36_A Conserved hypothetical 91.6 0.14 4.8E-06 46.4 4.2 30 19-48 2-31 (264)
438 3c7a_A Octopine dehydrogenase; 91.5 0.098 3.4E-06 50.9 3.2 30 18-47 3-33 (404)
439 3obb_A Probable 3-hydroxyisobu 91.5 0.18 6.1E-06 46.6 4.8 34 17-50 3-36 (300)
440 2egg_A AROE, shikimate 5-dehyd 91.5 0.17 5.9E-06 46.7 4.7 34 17-50 141-175 (297)
441 3b1f_A Putative prephenate deh 91.5 0.16 5.6E-06 46.7 4.6 34 17-50 6-41 (290)
442 1np3_A Ketol-acid reductoisome 91.4 0.21 7.1E-06 47.1 5.3 34 17-50 16-49 (338)
443 2hk9_A Shikimate dehydrogenase 91.4 0.16 5.5E-06 46.3 4.4 34 17-50 129-162 (275)
444 3vku_A L-LDH, L-lactate dehydr 91.3 0.19 6.4E-06 46.9 4.8 34 16-49 8-43 (326)
445 3ew7_A LMO0794 protein; Q8Y8U8 91.3 0.19 6.5E-06 43.8 4.7 33 18-50 1-34 (221)
446 1ldn_A L-lactate dehydrogenase 91.3 0.19 6.7E-06 46.8 4.9 34 17-50 6-41 (316)
447 3u62_A Shikimate dehydrogenase 91.2 0.21 7.1E-06 44.8 4.8 32 19-50 110-142 (253)
448 2vhw_A Alanine dehydrogenase; 91.2 0.2 6.7E-06 48.1 4.9 34 17-50 168-201 (377)
449 3abi_A Putative uncharacterize 91.0 0.15 5.1E-06 48.8 3.9 41 8-49 7-47 (365)
450 1hdo_A Biliverdin IX beta redu 90.9 0.24 8.1E-06 42.6 4.8 33 18-50 4-37 (206)
451 3zwc_A Peroxisomal bifunctiona 90.9 0.26 9E-06 51.5 5.9 35 16-50 315-349 (742)
452 4b4o_A Epimerase family protei 90.8 0.25 8.4E-06 45.6 5.2 34 18-51 1-35 (298)
453 1edz_A 5,10-methylenetetrahydr 90.8 0.22 7.5E-06 46.0 4.6 33 17-49 177-210 (320)
454 2rir_A Dipicolinate synthase, 90.8 0.23 8E-06 45.9 4.9 34 17-50 157-190 (300)
455 2d5c_A AROE, shikimate 5-dehyd 90.7 0.25 8.5E-06 44.7 4.9 32 19-50 118-149 (263)
456 3h2s_A Putative NADH-flavin re 90.6 0.24 8.2E-06 43.4 4.6 33 18-50 1-34 (224)
457 3don_A Shikimate dehydrogenase 90.5 0.19 6.6E-06 45.6 4.0 34 17-50 117-151 (277)
458 3vrd_B FCCB subunit, flavocyto 90.4 0.15 5.1E-06 49.5 3.4 34 18-51 3-38 (401)
459 3d4o_A Dipicolinate synthase s 90.4 0.27 9.1E-06 45.3 4.9 34 17-50 155-188 (293)
460 4hv4_A UDP-N-acetylmuramate--L 90.3 0.21 7.3E-06 49.8 4.4 36 16-51 21-57 (494)
461 2aef_A Calcium-gated potassium 90.2 0.11 3.9E-06 46.0 2.2 34 17-51 9-42 (234)
462 1mld_A Malate dehydrogenase; o 90.1 0.23 8E-06 46.2 4.3 33 18-50 1-36 (314)
463 3ius_A Uncharacterized conserv 90.1 0.24 8E-06 45.4 4.3 33 18-50 6-38 (286)
464 4a9w_A Monooxygenase; baeyer-v 90.1 0.2 7E-06 47.4 4.0 33 17-50 163-195 (357)
465 1pjq_A CYSG, siroheme synthase 90.0 0.23 8E-06 48.9 4.4 34 17-50 12-45 (457)
466 2d4a_B Malate dehydrogenase; a 89.9 0.29 9.9E-06 45.4 4.7 32 19-50 1-33 (308)
467 2yjz_A Metalloreductase steap4 89.3 0.061 2.1E-06 46.5 0.0 36 16-51 18-53 (201)
468 2zqz_A L-LDH, L-lactate dehydr 89.7 0.32 1.1E-05 45.5 4.9 35 15-49 7-43 (326)
469 3fbt_A Chorismate mutase and s 89.6 0.34 1.2E-05 44.1 4.8 34 17-50 122-156 (282)
470 3pwz_A Shikimate dehydrogenase 89.6 0.37 1.3E-05 43.6 5.0 34 17-50 120-154 (272)
471 1nvt_A Shikimate 5'-dehydrogen 89.5 0.26 9E-06 45.2 4.1 32 17-49 128-159 (287)
472 3ond_A Adenosylhomocysteinase; 89.4 0.32 1.1E-05 47.6 4.7 34 17-50 265-298 (488)
473 3jyo_A Quinate/shikimate dehyd 89.3 0.4 1.4E-05 43.7 5.1 34 17-50 127-161 (283)
474 1b8p_A Protein (malate dehydro 89.2 0.26 9.1E-06 46.2 3.9 34 16-49 4-45 (329)
475 2dbq_A Glyoxylate reductase; D 89.2 0.43 1.5E-05 44.8 5.3 35 17-51 150-184 (334)
476 3k30_A Histamine dehydrogenase 89.1 0.29 1E-05 51.2 4.6 36 18-53 524-561 (690)
477 3tnl_A Shikimate dehydrogenase 89.1 0.39 1.3E-05 44.5 4.9 33 17-49 154-187 (315)
478 1leh_A Leucine dehydrogenase; 89.1 0.39 1.3E-05 45.4 5.0 33 17-49 173-205 (364)
479 3i6i_A Putative leucoanthocyan 89.0 0.4 1.4E-05 45.3 5.0 34 17-50 10-44 (346)
480 3o8q_A Shikimate 5-dehydrogena 88.9 0.37 1.3E-05 43.9 4.6 34 17-50 126-160 (281)
481 1npy_A Hypothetical shikimate 88.9 0.42 1.4E-05 43.3 4.8 33 17-49 119-152 (271)
482 1ez4_A Lactate dehydrogenase; 88.9 0.36 1.2E-05 45.0 4.5 33 17-49 5-39 (318)
483 1smk_A Malate dehydrogenase, g 88.9 0.29 9.9E-06 45.8 3.9 35 17-51 8-45 (326)
484 1lqt_A FPRA; NADP+ derivative, 88.8 0.28 9.7E-06 48.4 4.0 44 250-295 265-326 (456)
485 4a26_A Putative C-1-tetrahydro 88.8 0.45 1.5E-05 43.3 4.9 33 17-49 165-198 (300)
486 2pzm_A Putative nucleotide sug 88.7 0.43 1.5E-05 44.8 5.1 36 15-50 18-54 (330)
487 1ff9_A Saccharopine reductase; 88.7 0.34 1.2E-05 47.6 4.5 34 17-50 3-36 (450)
488 3gvp_A Adenosylhomocysteinase 88.7 0.32 1.1E-05 46.8 4.0 34 17-50 220-253 (435)
489 1a4i_A Methylenetetrahydrofola 88.6 0.52 1.8E-05 42.9 5.2 33 17-49 165-198 (301)
490 3ngx_A Bifunctional protein fo 88.5 0.46 1.6E-05 42.6 4.7 33 17-49 150-183 (276)
491 4g6h_A Rotenone-insensitive NA 88.5 0.29 1E-05 49.0 3.9 35 18-52 218-266 (502)
492 3vps_A TUNA, NAD-dependent epi 88.4 0.49 1.7E-05 44.0 5.2 35 17-51 7-42 (321)
493 3ce6_A Adenosylhomocysteinase; 88.4 0.39 1.3E-05 47.4 4.6 34 17-50 274-307 (494)
494 3hyw_A Sulfide-quinone reducta 88.3 0.56 1.9E-05 45.9 5.7 56 235-294 198-255 (430)
495 2gcg_A Glyoxylate reductase/hy 88.3 0.44 1.5E-05 44.6 4.7 34 17-50 155-188 (330)
496 3dhn_A NAD-dependent epimerase 88.2 0.35 1.2E-05 42.4 3.8 34 17-50 4-38 (227)
497 4id9_A Short-chain dehydrogena 88.2 0.46 1.6E-05 44.8 5.0 37 15-51 17-54 (347)
498 3r6d_A NAD-dependent epimerase 88.2 0.58 2E-05 40.8 5.2 32 19-50 7-40 (221)
499 3ba1_A HPPR, hydroxyphenylpyru 88.0 0.58 2E-05 43.8 5.3 35 17-51 164-198 (333)
500 4fgw_A Glycerol-3-phosphate de 87.9 0.26 8.8E-06 47.1 2.8 38 15-52 32-77 (391)
No 1
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=2e-60 Score=488.26 Aligned_cols=462 Identities=22% Similarity=0.320 Sum_probs=262.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccccCCeeecccchhhhcch--hhhhhc-Cc--ccccc
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLR--PSLIKC-GT--RIGET 91 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~~g~~~d~g~~~~~~~~--~~~~~~-gl--~~~~~ 91 (531)
+.+|||||||++||+||++|+++|++|+|||+++++||+++++. .+||.||.|++++.... ..++.. |. ...+.
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~-~~G~~~D~G~~~~~~~~~~~~l~~~~g~~~~~~~~ 79 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYE-DQGFTFDAGPTVITDPSAIEELFALAGKQLKEYVE 79 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEE-ETTEEEECSCCCBSCTHHHHHHHHTTTCCGGGTCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEE-eCCEEEecCceeecCchhHHHHHHHhcchhhhcee
Confidence 46899999999999999999999999999999999999999986 78999999998753211 112222 21 11110
Q ss_pred hh--------------hhccchhhhHHHH--------HHHHHHHHHHHHHHhhcCCCccccc-CCCcchhhhhhhhhhhh
Q 048009 92 WN--------------EVVEAKSIIVYAI--------FEDQLDKFSQFVDLLFDSSPPELLQ-GSSSYSHQFKNKIRNSA 148 (531)
Q Consensus 92 ~~--------------~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 148 (531)
.. .+....+...+.. ....+.++......+.......... ....+.+
T Consensus 80 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 149 (501)
T 4dgk_A 80 LLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRD---------- 149 (501)
T ss_dssp EEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--CCCCCCCHHH----------
T ss_pred eEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhccccccchhhh----------
Confidence 00 0000111111111 0111122222222222211111000 0000000
Q ss_pred hHHHHHHHHHhcChhhHHHHHHHHhccHHHHhhcccCChhHHHHHhhhhhhccCCCCCCCChHHHHHHHHhhccCCCCCc
Q 048009 149 FWAHCLRRAISLGQKDLVEFVDLLLSPASKVLNKWFETDVLKATLATDAVIGTMSSVHTPGSGYVLLHHVMGETDGNPGI 228 (531)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (531)
.+... .....+. ...+..+++.+++.++.++..+......... .+......+.++.+. ....|.
T Consensus 150 ----~~~~~-----~~~~~l~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~-~p~~~~~~~~~~~~~----~~~~G~ 213 (501)
T 4dgk_A 150 ----MLRAA-----PQLAKLQ--AWRSVYSKVASYIEDEHLRQAFSFHSLLVGG-NPFATSSIYTLIHAL----EREWGV 213 (501)
T ss_dssp ----HHHSG-----GGTTTSH--HHHHHHHHHHTTCCCHHHHHHHHHHHHHHHS-CC--CCCTHHHHHHH----HSCCCE
T ss_pred ----hhhhh-----hhhhhhh--hcccHHHHHHHHhccHHHHhhhhhhhcccCC-Ccchhhhhhhhhhhh----hccCCe
Confidence 00000 0000000 1235567788899999999888744332221 233333444444433 234566
Q ss_pred cccccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCCCCCCCh
Q 048009 229 WSYVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVPGNILPD 308 (531)
Q Consensus 229 ~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~~~~~~~ 308 (531)
| +|+||+++|+++|++.++++|++|++|++|++|..++ +++++|+++||+++.||.||+|++++.++..|+++...+.
T Consensus 214 ~-~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~-~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~~ 291 (501)
T 4dgk_A 214 W-FPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETTG-NKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAAV 291 (501)
T ss_dssp E-EETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETTSCEEECSCEEECCC----------------
T ss_pred E-EeCCCCcchHHHHHHHHHHhCCceeeecceeEEEeeC-CeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccch
Confidence 6 9999999999999999999999999999999999998 9999999999999999999999999998888988776777
Q ss_pred HHHHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEEEEeCC
Q 048009 309 DFILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIEMTIPS 388 (531)
Q Consensus 309 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 388 (531)
...+.++..+++.+.++++++++..++. ..+ +++++..+....+++.+ ..+.+++++.+++++||
T Consensus 292 ~~~~~~~~~~~~~s~~~~~~~l~~~~~~----------l~~--~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~v~~~s 356 (501)
T 4dgk_A 292 KQSNKLQTKRMSNSLFVLYFGLNHHHDQ----------LAH--HTVCFGPRYRELIDEIF---NHDGLAEDFSLYLHAPC 356 (501)
T ss_dssp -----------CCEEEEEEEEESSCCTT----------SCS--EEEEEECC----------------CCCEEEEEEECGG
T ss_pred hhhhhhhccccCCceeEEEecccCCccc----------ccc--ceeccccchhhhccccc---cccccccCCceecccCC
Confidence 7778888888989999999999986532 122 37777666655555444 35678889999999999
Q ss_pred CCCCCCCCCCceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHH-hCCCCCCceeEEEecCcchHHHHhCCCCCc
Q 048009 389 VLDKTISPPGNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDE-YAPGFSSSIIGYDMLTPPDLEREIGLTGGN 467 (531)
Q Consensus 389 ~~d~~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~-~~P~~~~~i~~~~~~tp~~~~~~~~~~~G~ 467 (531)
..||+++|+|++++++++. .|+.... ..++++.|+++.+++++.|++ ++|+++++|+..++.||.||+++++.++|+
T Consensus 357 ~~dp~~ap~G~~~~~~~~~-~p~~~~~-~~~~~~~~~~~~~~vl~~l~~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~ 434 (501)
T 4dgk_A 357 VTDSSLAPEGCGSYYVLAP-VPHLGTA-NLDWTVEGPKLRDRIFAYLEQHYMPGLRSQLVTHRMFTPFDFRDQLNAYHGS 434 (501)
T ss_dssp GTCGGGSSTTCEEEEEEEE-ECCTTTS-CCCHHHHHHHHHHHHHHHHHHHTCTTHHHHEEEEEEECTTTTC---------
T ss_pred CCCCCcCCCCCceEEEEEe-cCccccc-cccHHHHHHHHHHHHHHHHHHhhCCChHHceEEEEECCHHHHHHHcCCCCcc
Confidence 9999999999999998865 4443221 222345689999999999987 569999999999999999999999999999
Q ss_pred ccccCCCccccccCCCCCCCCCCCCCCCCeeecCCCCCCCCCcCCc--hHHHHHHHHHHHhhh
Q 048009 468 IFHGAMGLDSLFLMRPVKGWSNYRTPLQGLYMCGSGTHPGGGVMGA--PGRNAAGIVLQDLKK 528 (531)
Q Consensus 468 ~~~~~~~~~~~~~~rp~~~~~~~~t~~~~ly~aG~~~~~g~g~~~~--sg~~aa~~i~~~~~~ 528 (531)
+||..+.+.|...+||. +..|||+|||+||+||+||+|++++ ||++||++|++|+.+
T Consensus 435 ~~g~~~~~~q~~~~RP~----~~~t~i~gLyl~G~~t~pG~Gv~ga~~SG~~aA~~il~dL~g 493 (501)
T 4dgk_A 435 AFSVEPVLTQSAWFRPH----NRDKTITNLYLVGAGTHPGAGIPGVIGSAKATAGLMLEDLIG 493 (501)
T ss_dssp -------------------------CCTTEEECCCH------HHHHHHHHHHHHHHHHHHHC-
T ss_pred ccChhcchhhccccCCC----CCCCCCCCEEEECCCCCCcccHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999998889983 4568999999999999999999997 999999999999843
No 2
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=1.2e-35 Score=298.02 Aligned_cols=405 Identities=20% Similarity=0.221 Sum_probs=245.2
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccccCCeeecccchhhh-c-chh---hhhhc-Ccccccc
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQS-L-LRP---SLIKC-GTRIGET 91 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~~g~~~d~g~~~~~-~-~~~---~~~~~-gl~~~~~ 91 (531)
+||+|||||++||+||++|+++|++|+|+|+++++||++.++. ..|+.+|.|+.+.. . ..+ .+++. |+...+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 79 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLS-YKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIV 79 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEE-ETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeec-cCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEE
Confidence 5899999999999999999999999999999999999999875 77999999964321 1 111 11111 3321110
Q ss_pred hhhhc-cchhhhHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcc-hhhhhhhhhhhhhHHHHHHHHHhcChhhHHHHH
Q 048009 92 WNEVV-EAKSIIVYAIFEDQLDKFSQFVDLLFDSSPPELLQGSSSY-SHQFKNKIRNSAFWAHCLRRAISLGQKDLVEFV 169 (531)
Q Consensus 92 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (531)
..... .... ..........+...+ .......+.... ..+.......... .
T Consensus 80 ~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~------~ 131 (425)
T 3ka7_A 80 RSEMTTVRVP---------------------LKKGNPDYVKGFKDISFNDFPSLLSYKD-RMKIALLIVSTRK------N 131 (425)
T ss_dssp ECCCCEEEEE---------------------SSTTCCSSTTCEEEEEGGGGGGGSCHHH-HHHHHHHHHHTTT------S
T ss_pred ecCCceEEee---------------------cCCCcccccccccceehhhhhhhCCHHH-HHHHHHHHHhhhh------c
Confidence 00000 0000 000000000000000 000000000000 0000000000000 0
Q ss_pred HHHhccHHHHhhcccCChhHHHHHhhh--hhhccCCCCCCCCh--HHHHHHHHhhccCCCCCccccccCchHHHHHHHHH
Q 048009 170 DLLLSPASKVLNKWFETDVLKATLATD--AVIGTMSSVHTPGS--GYVLLHHVMGETDGNPGIWSYVEGGMGSVSMAIGS 245 (531)
Q Consensus 170 ~~~~~~~~~~l~~~~~~~~l~~~~~~~--~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~ 245 (531)
.....++.+++.+++.++.++.++... ...+. .+..... .+..+.... ...+. .++.||++.++++|++
T Consensus 132 ~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~~~~~~~~----~~~~~-~~~~gG~~~l~~~l~~ 204 (425)
T 3ka7_A 132 RPSGSSLQAWIKSQVSDEWLIKFADSFCGWALSL--KSDEVPVEEVFEIIENMY----RFGGT-GIPEGGCKGIIDALET 204 (425)
T ss_dssp CCCSSBHHHHHHHHCCCHHHHHHHHHHHHHHHSS--CGGGSBHHHHHHHHHHHH----HHCSC-EEETTSHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhcCCHHHHHHHHHHHHHHhCC--CcccchHHHHHHHHHHHH----hcCCc-cccCCCHHHHHHHHHH
Confidence 002356777788877777776665421 12221 2222222 122222211 11233 3899999999999999
Q ss_pred HHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCCC-CCC--ChHHHHHhhccCCCCC
Q 048009 246 AAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVPG-NIL--PDDFILSIKHSDYSSG 322 (531)
Q Consensus 246 ~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~~-~~~--~~~~~~~i~~~~~~~~ 322 (531)
.++++|++|+++++|++|..++ +++++|+++ |+++.||.||+|++++.+ .+|++. ..+ ++.+.++++++++ .+
T Consensus 205 ~~~~~G~~i~~~~~V~~i~~~~-~~~~gv~~~-g~~~~ad~VV~a~~~~~~-~~ll~~~~~~~~~~~~~~~~~~~~~-~~ 280 (425)
T 3ka7_A 205 VISANGGKIHTGQEVSKILIEN-GKAAGIIAD-DRIHDADLVISNLGHAAT-AVLCSEALSKEADAAYFKMVGTLQP-SA 280 (425)
T ss_dssp HHHHTTCEEECSCCEEEEEEET-TEEEEEEET-TEEEECSEEEECSCHHHH-HHHTTTTCCTTTTHHHHHHHHHCCC-BE
T ss_pred HHHHcCCEEEECCceeEEEEEC-CEEEEEEEC-CEEEECCEEEECCCHHHH-HHhcCCcccccCCHHHHHHhhCcCC-Cc
Confidence 9999999999999999999987 888888875 677999999999999985 578864 334 7778888888887 46
Q ss_pred eEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCCCceEE
Q 048009 323 TTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIEMTIPSVLDKTISPPGNHVI 402 (531)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l 402 (531)
.+++++++++++ . .+. .++++.+. .+...++++|..||+++|+|++++
T Consensus 281 ~~~v~l~~~~~~-~------------~~~-~~~~~~~~------------------~~~~~~~~~s~~~p~~ap~G~~~l 328 (425)
T 3ka7_A 281 GIKICLAADEPL-V------------GHT-GVLLTPYT------------------RRINGVNEVTQADPELAPPGKHLT 328 (425)
T ss_dssp EEEEEEEESSCS-S------------CSS-SEEECCSS------------------SSEEEEECGGGTCGGGSCTTCEEE
T ss_pred eEEEEeecCCCc-c------------CcC-EEEECCCh------------------hhcceEEeccCCCCCcCCCCCeEE
Confidence 789999998853 1 222 45553221 235578999999999999999999
Q ss_pred EEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCceeEEEecCcchHHHHhCCCCCcccccCCCccccccCC
Q 048009 403 NLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFSSSIIGYDMLTPPDLEREIGLTGGNIFHGAMGLDSLFLMR 482 (531)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~~~~~~~~~~~G~~~~~~~~~~~~~~~r 482 (531)
+++.. .+ |++.+..++..+.++++|++++|+.+..+. .+ ..|.. ..|.... . ...+
T Consensus 329 ~~~~~-~~-------~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~--~v---~~~~~--~~P~~~~---~------~~~~ 384 (425)
T 3ka7_A 329 MCHQY-VA-------PENVKNLESEIEMGLEDLKEIFPGKRYEVL--LI---QSYHD--EWPVNRA---A------SGTD 384 (425)
T ss_dssp EEEEE-EC-------GGGGGGHHHHHHHHHHHHHHHSTTCCEEEE--EE---EEEBT--TBCSBSS---C------TTCC
T ss_pred EEEec-cc-------cccccchHHHHHHHHHHHHHhCCCCceEEE--EE---EEECC--Ccccccc---c------cCCC
Confidence 88642 22 322222356679999999999998543332 21 12221 1121111 0 0134
Q ss_pred CCCCCCCCCCCCCCeeecCCCCCC--CCCcCCc--hHHHHHHHHH
Q 048009 483 PVKGWSNYRTPLQGLYMCGSGTHP--GGGVMGA--PGRNAAGIVL 523 (531)
Q Consensus 483 p~~~~~~~~t~~~~ly~aG~~~~~--g~g~~~~--sg~~aa~~i~ 523 (531)
| ..+||++|||+||||+++ |.|++++ ||+.||+.|+
T Consensus 385 ~-----~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 385 P-----GNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp C-----CSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred C-----CCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 4 678999999999999998 5666776 9999999886
No 3
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=100.00 E-value=4.1e-33 Score=278.80 Aligned_cols=383 Identities=21% Similarity=0.213 Sum_probs=234.4
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccccCCeeecccchhhhcc--hh---hhhhc-Ccccccc
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLL--RP---SLIKC-GTRIGET 91 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~~g~~~d~g~~~~~~~--~~---~~~~~-gl~~~~~ 91 (531)
+||+|||||++||+||++|+++|++|+|+|+++++||++.+.. ..|+.+|.|+++.... .+ .+++. |+...+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~-~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 79 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLP-YKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIV 79 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEE-ETTEEEESSSCSEETTTTSSHHHHHHHHHTCCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEec-cCCEEEecCCeEEEccCCChHHHHHHHHhCCcceEE
Confidence 4899999999999999999999999999999999999999876 6799999997442110 11 11111 2110000
Q ss_pred hhhhccchhhhHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcchhhhhhhhhh-hhhHHHHHHHHHhcChhhHHHHH-
Q 048009 92 WNEVVEAKSIIVYAIFEDQLDKFSQFVDLLFDSSPPELLQGSSSYSHQFKNKIRN-SAFWAHCLRRAISLGQKDLVEFV- 169 (531)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 169 (531)
. ..+... .+.+.....+.. ...+......... .......
T Consensus 80 ~-------------------------------~~~~~~-----~~~~g~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~ 120 (421)
T 3nrn_A 80 N-------------------------------SNPKGK-----ILWEGKIFHYRESWKFLSVKEKAKAL---KLLAEIRM 120 (421)
T ss_dssp E-------------------------------CSSSCE-----EEETTEEEEGGGGGGGCC-----------CCHHHHHT
T ss_pred E-------------------------------CCCCeE-----EEECCEEEEcCCchhhCCHhHHHHHH---HHHHHHHh
Confidence 0 000000 000000000000 0000000000000 0000000
Q ss_pred ---HHHhccHHHHhhcc-cCChhHHHHHhh--hhhhccCCCCCCCCh--HHHHHHHHhhccCCCCCccccccCchHHHHH
Q 048009 170 ---DLLLSPASKVLNKW-FETDVLKATLAT--DAVIGTMSSVHTPGS--GYVLLHHVMGETDGNPGIWSYVEGGMGSVSM 241 (531)
Q Consensus 170 ---~~~~~~~~~~l~~~-~~~~~l~~~~~~--~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~ 241 (531)
.....+..+++.++ +.++.++..+.. ..+.+. .+..... .+..+..... ..+.+ +++||++.+++
T Consensus 121 ~~~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~g~~-~~~gG~~~l~~ 193 (421)
T 3nrn_A 121 NKLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSV--SLSDLTALELAKEIRAALR----WGGPG-LIRGGCKAVID 193 (421)
T ss_dssp TCCCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSS--CGGGSBHHHHHHHHHHHHH----HCSCE-EETTCHHHHHH
T ss_pred ccCCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCC--CcccCCHHHHHHHHHHHhh----cCCcc-eecCCHHHHHH
Confidence 00125677777777 777776665442 112221 2222222 2222222211 12334 89999999999
Q ss_pred HHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCCCCCCChHHHHHhhccCCCC
Q 048009 242 AIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVPGNILPDDFILSIKHSDYSS 321 (531)
Q Consensus 242 ~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~~~~~~~~~~~~i~~~~~~~ 321 (531)
+|++.++++|++|+++++|++|..++ +++ | +.+|+++.||.||+|++++.+ .+|++.+.+++...+.+.+++++
T Consensus 194 ~l~~~~~~~G~~i~~~~~V~~i~~~~-~~v--V-~~~g~~~~ad~Vv~a~~~~~~-~~ll~~~~~~~~~~~~~~~~~~~- 267 (421)
T 3nrn_A 194 ELERIIMENKGKILTRKEVVEINIEE-KKV--Y-TRDNEEYSFDVAISNVGVRET-VKLIGRDYFDRDYLKQVDSIEPS- 267 (421)
T ss_dssp HHHHHHHTTTCEEESSCCEEEEETTT-TEE--E-ETTCCEEECSEEEECSCHHHH-HHHHCGGGSCHHHHHHHHTCCCC-
T ss_pred HHHHHHHHCCCEEEcCCeEEEEEEEC-CEE--E-EeCCcEEEeCEEEECCCHHHH-HHhcCcccCCHHHHHHHhCCCCC-
Confidence 99999999999999999999999877 665 5 567778999999999999985 67887545788888889999985
Q ss_pred CeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCCCceE
Q 048009 322 GTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIEMTIPSVLDKTISPPGNHV 401 (531)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~ 401 (531)
+++++++++++.+ + + +. +++++.+. . +..++++|..||+++|+|+++
T Consensus 268 ~~~~v~l~~~~~~-~-----------~-~~-~~~~~~~~------------------~-~~~i~~~s~~~p~~ap~G~~~ 314 (421)
T 3nrn_A 268 EGIKFNLAVPGEP-R-----------I-GN-TIVFTPGL------------------M-INGFNEPSALDKSLAREGYTL 314 (421)
T ss_dssp CEEEEEEEEESSC-S-----------S-CS-SEEECTTS------------------S-SCEEECGGGTCGGGSCTTEEE
T ss_pred ceEEEEEEEcCCc-c-----------c-CC-eEEEcCCc------------------c-eeeEeccCCCCCCcCCCCceE
Confidence 8899999998753 1 1 22 45553331 1 225889999999999999999
Q ss_pred EEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCceeEEEecCcchHHHHhCCCCCcccccCCCccccccC
Q 048009 402 INLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFSSSIIGYDMLTPPDLEREIGLTGGNIFHGAMGLDSLFLM 481 (531)
Q Consensus 402 l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~~~~~~~~~~~G~~~~~~~~~~~~~~~ 481 (531)
++++.. .+. .+. ++..+.++++|++++| ...+... .+|.. +.|. |+... ..
T Consensus 315 ~~~~~~-~~~-------~~~---~~~~~~~~~~L~~~~p--~~~~~~~-----~~~~~--~~p~---~~~~~------~~ 365 (421)
T 3nrn_A 315 IMAHMA-LKN-------GNV---KKAIEKGWEELLEIFP--EGEPLLA-----QVYRD--GNPV---NRTRA------GL 365 (421)
T ss_dssp EEEEEE-CTT-------CCH---HHHHHHHHHHHHHHCT--TCEEEEE-----EEC------------------------
T ss_pred EEEEEe-ecc-------ccH---HHHHHHHHHHHHHHcC--CCeEEEe-----eeccC--CCCc---ccccC------CC
Confidence 888642 321 221 3458999999999999 2222222 11211 1121 11000 01
Q ss_pred CCCCCCCCCCCCCCCeeecCCCCCCCCCc--CCc--hHHHHHHHH
Q 048009 482 RPVKGWSNYRTPLQGLYMCGSGTHPGGGV--MGA--PGRNAAGIV 522 (531)
Q Consensus 482 rp~~~~~~~~t~~~~ly~aG~~~~~g~g~--~~~--sg~~aa~~i 522 (531)
++ . .++ +|||+|||++.+++|+ ++| ||+.||++|
T Consensus 366 ~~-----~-~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 366 HI-----E-WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp CC-----C-CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred CC-----C-CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 22 3 678 9999999999987778 777 999999998
No 4
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=3.7e-31 Score=271.69 Aligned_cols=419 Identities=19% Similarity=0.160 Sum_probs=243.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccccCCeeecccchhhhcchhhhhhc----Ccccccch
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSLIKC----GTRIGETW 92 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~~g~~~d~g~~~~~~~~~~~~~~----gl~~~~~~ 92 (531)
++||+|||||++||+||++|+++|++|+|+|+++++||++.+....+|+.+|.|++++....+.+.+. |+......
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~~~~ 83 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETYKVN 83 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEEECC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcceecc
Confidence 58999999999999999999999999999999999999999876335899999987755433333322 54311100
Q ss_pred ---hhh--------ccchhhhH--HHHHHHHHHHHHHHHHHhhcCCCcccccCCCcchhhhhhhhhhhhhHHHHHHHHHh
Q 048009 93 ---NEV--------VEAKSIIV--YAIFEDQLDKFSQFVDLLFDSSPPELLQGSSSYSHQFKNKIRNSAFWAHCLRRAIS 159 (531)
Q Consensus 93 ---~~~--------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (531)
..+ ........ ..........+...+..+.......
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------- 132 (520)
T 1s3e_A 84 EVERLIHHVKGKSYPFRGPFPPVWNPITYLDHNNFWRTMDDMGREIPSD------------------------------- 132 (520)
T ss_dssp CSSEEEEEETTEEEEECSSSCCCCSHHHHHHHHHHHHHHHHHHTTSCTT-------------------------------
T ss_pred cCCceEEEECCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCcC-------------------------------
Confidence 000 00000000 0000000111111111111110000
Q ss_pred cChhhHHHHHHHHhccHHHHhhcccCChhHHHHHhh--hhhhccCCCCCCCChHHHHHHHHhhc------c-CCCCCccc
Q 048009 160 LGQKDLVEFVDLLLSPASKVLNKWFETDVLKATLAT--DAVIGTMSSVHTPGSGYVLLHHVMGE------T-DGNPGIWS 230 (531)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~ 230 (531)
..............++.+++.+.+.++.++.++.. ..+.+. .+...+..+. +..+... . ....+.+.
T Consensus 133 -~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~g~--~~~~~s~~~~-~~~~~~~g~~~~~~~~~~~~~~~ 208 (520)
T 1s3e_A 133 -APWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTA--ETHEVSALWF-LWYVKQCGGTTRIISTTNGGQER 208 (520)
T ss_dssp -CGGGSTTHHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHHHHSS--CTTTSBHHHH-HHHHHTTTCHHHHHCSTTSTTSE
T ss_pred -CCccccchhhhhccCHHHHHHhhCCCHHHHHHHHHHHhhhcCC--ChHHhHHHHH-HHHHhhcCchhhhcccCCCcceE
Confidence 00000001123457888888888887777666552 223332 2233333222 1111100 0 01123334
Q ss_pred cccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCCCCCCChHH
Q 048009 231 YVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVPGNILPDDF 310 (531)
Q Consensus 231 ~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~~~~~~~~~ 310 (531)
++.||+++|+++|++.+ |++|++|++|++|..++ +++. |++.+|+++.||+||+|+++.. +.+++..+.+|+..
T Consensus 209 ~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~-~~v~-v~~~~g~~~~ad~VI~a~p~~~-l~~l~~~p~lp~~~ 282 (520)
T 1s3e_A 209 KFVGGSGQVSERIMDLL---GDRVKLERPVIYIDQTR-ENVL-VETLNHEMYEAKYVISAIPPTL-GMKIHFNPPLPMMR 282 (520)
T ss_dssp EETTCTHHHHHHHHHHH---GGGEESSCCEEEEECSS-SSEE-EEETTSCEEEESEEEECSCGGG-GGGSEEESCCCHHH
T ss_pred EEeCCHHHHHHHHHHHc---CCcEEcCCeeEEEEECC-CeEE-EEECCCeEEEeCEEEECCCHHH-HcceeeCCCCCHHH
Confidence 88999999999998755 78999999999999877 6665 8899998899999999999888 46776455688888
Q ss_pred HHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEEEEeCCCC
Q 048009 311 ILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIEMTIPSVL 390 (531)
Q Consensus 311 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 390 (531)
.+.++++.+ .++.++++.++++. +. +. ...+.+++.++ ..+..++..
T Consensus 283 ~~~i~~~~~-~~~~kv~l~~~~~~-w~-------~~--~~~g~~~~~~~------------------~~~~~~~~d---- 329 (520)
T 1s3e_A 283 NQMITRVPL-GSVIKCIVYYKEPF-WR-------KK--DYCGTMIIDGE------------------EAPVAYTLD---- 329 (520)
T ss_dssp HHHTTSCCB-CCEEEEEEECSSCG-GG-------GG--TEEEEEEECST------------------TCSCSEEEE----
T ss_pred HHHHHhCCC-cceEEEEEEeCCCc-cc-------CC--CCCceeeccCC------------------CCceEEEee----
Confidence 889998887 68899999998752 21 00 11223333111 112223222
Q ss_pred CCCCCCCCceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCceeEEEecCcchHHHHh----CCCCC
Q 048009 391 DKTISPPGNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFSSSIIGYDMLTPPDLEREI----GLTGG 466 (531)
Q Consensus 391 d~~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~~~~~~~----~~~~G 466 (531)
++..|.++.+++.++...+.. .|... .++++.+.+++.|++++|.-. ..+|.++.... ....|
T Consensus 330 -~~~~~~~~~~l~~~~~~~~a~----~~~~~-~~~e~~~~vl~~L~~~~~~~~-------~~~p~~~~~~~W~~~~~~~G 396 (520)
T 1s3e_A 330 -DTKPEGNYAAIMGFILAHKAR----KLARL-TKEERLKKLCELYAKVLGSLE-------ALEPVHYEEKNWCEEQYSGG 396 (520)
T ss_dssp -CCCTTSCSCEEEEEEETHHHH----HHTTS-CHHHHHHHHHHHHHHHHTCGG-------GGCCSEEEEEEGGGCTTTCS
T ss_pred -CCCCCCCCCEEEEEccchhhh----hhhcC-CHHHHHHHHHHHHHHHhCccc-------cCCccEEEEEeeCCCCCCCC
Confidence 222233346666665322211 23321 258899999999999987521 12343332211 11233
Q ss_pred cccccCCCccccccCCCCCCCCCCCCCCCCeeecCCCCCC--CCCcCCc--hHHHHHHHHHHHhhh
Q 048009 467 NIFHGAMGLDSLFLMRPVKGWSNYRTPLQGLYMCGSGTHP--GGGVMGA--PGRNAAGIVLQDLKK 528 (531)
Q Consensus 467 ~~~~~~~~~~~~~~~rp~~~~~~~~t~~~~ly~aG~~~~~--g~g~~~~--sg~~aa~~i~~~~~~ 528 (531)
++.+ ...+.+...+++ ..++|++||||||+++.. .++++|| ||+.||++|++.+++
T Consensus 397 ~~~~-~~~~g~~~~~~~-----~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~~l~~ 456 (520)
T 1s3e_A 397 CYTT-YFPPGILTQYGR-----VLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGK 456 (520)
T ss_dssp SSCB-CCCTTHHHHHGG-----GTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCcc-ccCCCccccchH-----HHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHHHHhc
Confidence 3221 111122112333 456789999999999832 3478888 999999999998764
No 5
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.97 E-value=1.9e-30 Score=262.17 Aligned_cols=410 Identities=18% Similarity=0.165 Sum_probs=233.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccccCCeeecccchhhhcchhhhhhc----Ccccccc
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSLIKC----GTRIGET 91 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~~g~~~d~g~~~~~~~~~~~~~~----gl~~~~~ 91 (531)
.++||+|||||++||+||++|+++|++|+|+|+++++||++.+.. .+|+.+|.|++++....+.+.+. |+.....
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~ 82 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDT-IDGAVLEIGGQWVSPDQTALISLLDELGLKTFER 82 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEE-ETTEEEECSCCCBCTTCHHHHHHHHHTTCCEEEC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccc-cCCceeccCCeEecCccHHHHHHHHHcCCccccc
Confidence 358999999999999999999999999999999999999998876 47899999987654333332222 4421100
Q ss_pred hh---hhc-c-------------chhhhHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcchhhhhhhhhhhhhHHHHH
Q 048009 92 WN---EVV-E-------------AKSIIVYAIFEDQLDKFSQFVDLLFDSSPPELLQGSSSYSHQFKNKIRNSAFWAHCL 154 (531)
Q Consensus 92 ~~---~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (531)
.. .+. . .........+......+......+...
T Consensus 83 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------ 132 (453)
T 2yg5_A 83 YREGESVYISSAGERTRYTGDSFPTNETTKKEMDRLIDEMDDLAAQIGAE------------------------------ 132 (453)
T ss_dssp CCCSEEEEECTTSCEEEECSSSCSCCHHHHHHHHHHHHHHHHHHHHHCSS------------------------------
T ss_pred ccCCCEEEEeCCCceeeccCCCCCCChhhHHHHHHHHHHHHHHHhhcCCC------------------------------
Confidence 00 000 0 000000000000000000000000000
Q ss_pred HHHHhcChhhHHHHHHHHhccHHHHhhcccCChhHHHHHhhhhhhccCC-CCC-CCChHHHHHHHHhhc--c----CCCC
Q 048009 155 RRAISLGQKDLVEFVDLLLSPASKVLNKWFETDVLKATLATDAVIGTMS-SVH-TPGSGYVLLHHVMGE--T----DGNP 226 (531)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~g~~~-~~~-~~~~~~~~~~~~~~~--~----~~~~ 226 (531)
..........+...++.+++.+.+.++.++.++.... .+.+. .+. ..+..+ ++...... . ....
T Consensus 133 ------~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~-~~~~~~~~g~~~~~~~~~~ 204 (453)
T 2yg5_A 133 ------EPWAHPLARDLDTVSFKQWLINQSDDAEARDNIGLFI-AGGMLTKPAHSFSALQ-AVLMAASAGSFSHLVDEDF 204 (453)
T ss_dssp ------CGGGSTTHHHHHSSBHHHHHHHHCSCHHHHHHHHHHH-CCCCCCSCTTSSBHHH-HHHHHHHTTCHHHHHCHHH
T ss_pred ------CCCCCcchhhhhhccHHHHHHhhcCCHHHHHHHHHHH-HhhcccCCcccccHHH-HHHHhccCCcHhhhccCCC
Confidence 0000001123356788888888888887777655321 11111 222 222222 22111100 0 0000
Q ss_pred CccccccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCc-eeEEEeCCCcEEEcCeEEecCChHhHHhhcCCCCC
Q 048009 227 GIWSYVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGR-VNGVQLADGAQVHSSIVLSNATPYKTFMDLVPGNI 305 (531)
Q Consensus 227 ~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~-~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~~~~ 305 (531)
..+.+++||++.++++|++.+ |++|++|++|++|..++ ++ +. |++ +|+++.||+||+|+++.. +.+|+..+.
T Consensus 205 ~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~-~~~v~-v~~-~~~~~~ad~VI~a~p~~~-~~~l~~~p~ 277 (453)
T 2yg5_A 205 ILDKRVIGGMQQVSIRMAEAL---GDDVFLNAPVRTVKWNE-SGATV-LAD-GDIRVEASRVILAVPPNL-YSRISYDPP 277 (453)
T ss_dssp HTCEEETTCTHHHHHHHHHHH---GGGEECSCCEEEEEEET-TEEEE-EET-TTEEEEEEEEEECSCGGG-GGGSEEESC
T ss_pred cceEEEcCChHHHHHHHHHhc---CCcEEcCCceEEEEEeC-CceEE-EEE-CCeEEEcCEEEEcCCHHH-HhcCEeCCC
Confidence 123478999999999998754 78999999999999877 65 44 666 677899999999999887 467765556
Q ss_pred CChHHHHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEEEE
Q 048009 306 LPDDFILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIEMT 385 (531)
Q Consensus 306 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (531)
+|+...+.++++.+ .+++++++.++++. +. +. ...+.+ +.. ..+...+.
T Consensus 278 lp~~~~~~i~~~~~-~~~~kv~l~~~~~~-w~-------~~--~~~g~~-~~~-------------------~~~~~~~~ 326 (453)
T 2yg5_A 278 LPRRQHQMHQHQSL-GLVIKVHAVYETPF-WR-------ED--GLSGTG-FGA-------------------SEVVQEVY 326 (453)
T ss_dssp CCHHHHHHGGGEEE-CCEEEEEEEESSCG-GG-------GG--TEEEEE-ECT-------------------TSSSCEEE
T ss_pred CCHHHHHHHhcCCC-cceEEEEEEECCCC-CC-------CC--CCCcee-ecC-------------------CCCeEEEE
Confidence 88888888998888 57899999998742 21 00 011222 211 11222222
Q ss_pred eCCCCCCCCCCCC-ceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCceeEEEecCcchHHHHh---
Q 048009 386 IPSVLDKTISPPG-NHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFSSSIIGYDMLTPPDLEREI--- 461 (531)
Q Consensus 386 ~~s~~d~~~ap~G-~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~~~~~~~--- 461 (531)
.++ .|+| +.++++++...... .|.. ..++++.+.+++.|++++|.- ..+|.++....
T Consensus 327 ~~~------~~~~~~~~l~~~~~~~~~~----~~~~-~~~~~~~~~~l~~L~~~~~~~--------~~~p~~~~~~~W~~ 387 (453)
T 2yg5_A 327 DNT------NHEDDRGTLVAFVSDEKAD----AMFE-LSAEERKATILASLARYLGPK--------AEEPVVYYESDWGS 387 (453)
T ss_dssp ECC------CTTCSSEEEEEEEEHHHHH----HHHH-SCHHHHHHHHHHHHHHHHCGG--------GGCCSEEEECCTTT
T ss_pred eCC------CCCCCCCEEEEEeccHHHH----HHhc-CCHHHHHHHHHHHHHHHhCcc--------CCCccEEEEeecCC
Confidence 222 3444 45666654321111 2321 124788899999999998741 12343332111
Q ss_pred -CCCCCcccccCCCccccccCCCCCCCCCCCCCCCCeeecCCCCCC--CCCcCCc--hHHHHHHHHHHHhh
Q 048009 462 -GLTGGNIFHGAMGLDSLFLMRPVKGWSNYRTPLQGLYMCGSGTHP--GGGVMGA--PGRNAAGIVLQDLK 527 (531)
Q Consensus 462 -~~~~G~~~~~~~~~~~~~~~rp~~~~~~~~t~~~~ly~aG~~~~~--g~g~~~~--sg~~aa~~i~~~~~ 527 (531)
....|++. ....+.+...+++ ..++|++||||||+++.+ .++++|| ||+.||++|++.++
T Consensus 388 ~~~~~G~~~-~~~~~g~~~~~~~-----~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 388 EEWTRGCYA-ASFDLGGLHRYGA-----DSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp CTTTCSSSC-EEECTTHHHHHGG-----GTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCCc-CcCCCCccccchH-----HHhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHHHhc
Confidence 11223321 1111111111233 457789999999999842 2378888 99999999998764
No 6
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.97 E-value=1.4e-30 Score=265.02 Aligned_cols=417 Identities=14% Similarity=0.142 Sum_probs=229.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccccCCeeecccchhhhcchhhhhhc----Ccccccc
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSLIKC----GTRIGET 91 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~~g~~~d~g~~~~~~~~~~~~~~----gl~~~~~ 91 (531)
..+||+|||||++||+||+.|+++|++|+|+|+++++||++.+.. ..|+.+|.|++++....+.+.+. |+.....
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~~~~~ 93 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHA-LAGYLVEQGPNSFLDREPATRALAAALNLEGRIR 93 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEE-ETTEEEESSCCCEETTCHHHHHHHHHTTCGGGEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeec-cCCeeeecChhhhhhhhHHHHHHHHHcCCcceee
Confidence 468999999999999999999999999999999999999999976 57999999988765434433322 5432111
Q ss_pred hhh------h-ccchhhhHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcchhhhhhhhhhhhhHHHHHHHHHhcChhh
Q 048009 92 WNE------V-VEAKSIIVYAIFEDQLDKFSQFVDLLFDSSPPELLQGSSSYSHQFKNKIRNSAFWAHCLRRAISLGQKD 164 (531)
Q Consensus 92 ~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (531)
... + ........++. .. ..++.... ..+.++.. .+.........
T Consensus 94 ~~~~~~~~~~~~~~g~~~~~p~---~~-------~~~~~~~~-------~~~~~~~~-----------~~~~~~~~~~~- 144 (478)
T 2ivd_A 94 AADPAAKRRYVYTRGRLRSVPA---SP-------PAFLASDI-------LPLGARLR-----------VAGELFSRRAP- 144 (478)
T ss_dssp CSCSSCCCEEEEETTEEEECCC---SH-------HHHHTCSS-------SCHHHHHH-----------HHGGGGCCCCC-
T ss_pred ecCccccceEEEECCEEEECCC---CH-------HHhccCCC-------CCHHHHHH-----------HhhhhhcCCCC-
Confidence 000 0 00000000000 00 00000000 00000000 00000000000
Q ss_pred HHHHHHHHhccHHHHhhcccCChhHHHHHhh--hhhhccCCCCCCCChHHH--H-----------HHHHhhc----c---
Q 048009 165 LVEFVDLLLSPASKVLNKWFETDVLKATLAT--DAVIGTMSSVHTPGSGYV--L-----------LHHVMGE----T--- 222 (531)
Q Consensus 165 ~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~~g~~~~~~~~~~~~~--~-----------~~~~~~~----~--- 222 (531)
.....++.+++.+.+.++.++..+.. ..+.+. .+........ . +..+... .
T Consensus 145 -----~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (478)
T 2ivd_A 145 -----EGVDESLAAFGRRHLGHRATQVLLDAVQTGIYAG--DVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAA 217 (478)
T ss_dssp -----TTCCCBHHHHHHHHTCHHHHHHTHHHHHHHHHCC--CTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC-
T ss_pred -----CCCCCCHHHHHHHhhCHHHHHHHHHHHhceeecC--CHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhcccccc
Confidence 01223455555554444433333321 111111 1111111110 0 0000000 0
Q ss_pred --CCCC----CccccccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEe---CCCcEEEcCeEEecCCh
Q 048009 223 --DGNP----GIWSYVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQL---ADGAQVHSSIVLSNATP 293 (531)
Q Consensus 223 --~~~~----~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~---~~g~~~~ad~VV~aa~~ 293 (531)
.... +.+.+++||++.|+++|++.+ |++|+++++|++|..++ ++ +.|++ .+|+++.||+||+|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~-~~-~~v~~~~~~~g~~~~ad~vV~a~~~ 292 (478)
T 2ivd_A 218 LPAGTAPKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLARED-GG-WRLIIEEHGRRAELSVAQVVLAAPA 292 (478)
T ss_dssp ---CCSCCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC---C-CEEEEEETTEEEEEECSEEEECSCH
T ss_pred CcccccccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEecC-Ce-EEEEEeecCCCceEEcCEEEECCCH
Confidence 0011 334489999999999998876 67999999999999877 55 45887 67878999999999998
Q ss_pred HhHHhhcCCCCCCChHHHHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHc
Q 048009 294 YKTFMDLVPGNILPDDFILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVN 373 (531)
Q Consensus 294 ~~~~~~ll~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (531)
+.+ .+|+++ +++...+.++++++ .+++++++.++++. +. . +...+ +.++..
T Consensus 293 ~~~-~~ll~~--l~~~~~~~l~~~~~-~~~~~v~l~~~~~~-~~-------~--~~~~~-~~~~~~-------------- 343 (478)
T 2ivd_A 293 HAT-AKLLRP--LDDALAALVAGIAY-APIAVVHLGFDAGT-LP-------A--PDGFG-FLVPAE-------------- 343 (478)
T ss_dssp HHH-HHHHTT--TCHHHHHHHHTCCB-CCEEEEEEEECTTS-SC-------C--CCSSE-EECCGG--------------
T ss_pred HHH-HHHhhc--cCHHHHHHHhcCCC-CcEEEEEEEEcccc-CC-------C--CCceE-EEecCC--------------
Confidence 884 677754 78888888999988 58899999998753 21 1 11222 222110
Q ss_pred CCCCCCCeEEEEeCCCCCCCCCCCCceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCceeEEEecC
Q 048009 374 GLPSRRPIIEMTIPSVLDKTISPPGNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFSSSIIGYDMLT 453 (531)
Q Consensus 374 ~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~t 453 (531)
...+...+.+++..++.++|+|+.++++++...... .|.. ..++++.+.+++.|++++|... .+....+
T Consensus 344 ---~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~----~~~~-~~~~~~~~~~~~~l~~~~~~~~-~p~~~~~-- 412 (478)
T 2ivd_A 344 ---EQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQP----GLVE-QDEDALAALAREELKALAGVTA-RPSFTRV-- 412 (478)
T ss_dssp ---GCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCG----GGGG-SCHHHHHHHHHHHHHHHHCCCS-CCSEEEE--
T ss_pred ---CCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCc----cccC-CCHHHHHHHHHHHHHHHhCCCC-CCcEEEE--
Confidence 112344566666667777888988888775422110 1211 1358899999999999998653 2221111
Q ss_pred cchHHHHhCCCCCc-ccccCCCccccccCCCCCCCCCCCCCCCCeeecCCCCCCCCCcCCc--hHHHHHHHHHHHhhhh
Q 048009 454 PPDLEREIGLTGGN-IFHGAMGLDSLFLMRPVKGWSNYRTPLQGLYMCGSGTHPGGGVMGA--PGRNAAGIVLQDLKKS 529 (531)
Q Consensus 454 p~~~~~~~~~~~G~-~~~~~~~~~~~~~~rp~~~~~~~~t~~~~ly~aG~~~~~g~g~~~~--sg~~aa~~i~~~~~~~ 529 (531)
..| ..+. .|+.... .....+++ ..++ ++||||||+++ +|.|+++| ||+.||+.|++.++.+
T Consensus 413 -~~w------~~~~p~~~~g~~-~~~~~~~~-----~~~~-~~~l~~aG~~~-~g~gv~gA~~SG~~aA~~i~~~l~~~ 476 (478)
T 2ivd_A 413 -FRW------PLGIPQYNLGHL-ERVAAIDA-----ALQR-LPGLHLIGNAY-KGVGLNDCIRNAAQLADALVAGNTSH 476 (478)
T ss_dssp -EEE------SSCCBCCBTTHH-HHHHHHHH-----HHHT-STTEEECSTTT-SCCSHHHHHHHHHHHHHHHCC-----
T ss_pred -EEC------CCcccCCCcCHH-HHHHHHHH-----HHhh-CCCEEEEccCC-CCCCHHHHHHHHHHHHHHHHHhhccC
Confidence 111 1111 1211110 00000111 1122 68999999998 57789888 9999999998877653
No 7
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.97 E-value=8.1e-29 Score=253.02 Aligned_cols=418 Identities=17% Similarity=0.146 Sum_probs=234.3
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccccCCeeecccchhhhcchhhhhhc----Ccccccchh
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSLIKC----GTRIGETWN 93 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~~g~~~d~g~~~~~~~~~~~~~~----gl~~~~~~~ 93 (531)
+||+|||||++||+||+.|+++|++|+|+|+++++||++.+.. ..|+.+|.|++++....+.+++. |+...+...
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~-~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~~~~~ 118 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSN-IDGYPYEMGGTWVHWHQSHVWREITRYKMHNALSPS 118 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEE-ETTEEEECSCCCBCTTSHHHHHHHHHTTCTTCEEES
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecc-cCCeeecCCCeEecCccHHHHHHHHHcCCcceeecc
Confidence 8999999999999999999999999999999999999999876 67999999998876556665544 652221111
Q ss_pred h--------hc-cc--hhhhHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcchhhhhhhhhhhhhHHHHHHHHHhcCh
Q 048009 94 E--------VV-EA--KSIIVYAIFEDQLDKFSQFVDLLFDSSPPELLQGSSSYSHQFKNKIRNSAFWAHCLRRAISLGQ 162 (531)
Q Consensus 94 ~--------~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (531)
. +. .. .....++. ......+...+..+....... .. .+........ ..
T Consensus 119 ~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~----------------~~ 177 (495)
T 2vvm_A 119 FNFSRGVNHFQLRTNPTTSTYMTH-EAEDELLRSALHKFTNVDGTN-GR---TVLPFPHDMF----------------YV 177 (495)
T ss_dssp CCCSSSCCEEEEESSTTCCEEECH-HHHHHHHHHHHHHHHCSSSST-TT---TTCSCTTSTT----------------SS
T ss_pred cccCCCceEEEecCCCCceeecCH-HHHHHHHHHHHHHHHccchhh-hh---hcCCCCCCcc----------------cC
Confidence 0 00 00 00000000 000111112222232210000 00 0000000000 00
Q ss_pred hhHHHHHHHHhccHHHHhhccc--CChhHHHHHhhh--hhhccCCCCCCCChHHHHHHHHhhcc------CCCCCccccc
Q 048009 163 KDLVEFVDLLLSPASKVLNKWF--ETDVLKATLATD--AVIGTMSSVHTPGSGYVLLHHVMGET------DGNPGIWSYV 232 (531)
Q Consensus 163 ~~~~~~~~~~~~~~~~~l~~~~--~~~~l~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 232 (531)
..+..+...++.+++.+.. .++.++.++... .+.+ ..+...+... ++....... ....+.| ++
T Consensus 178 ---~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~-~~ 250 (495)
T 2vvm_A 178 ---PEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLCSG--GTLENSSFGE-FLHWWAMSGYTYQGCMDCLMSY-KF 250 (495)
T ss_dssp ---TTHHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHHHS--SCTTTSBHHH-HHHHHHHTTSSHHHHHHHHHSE-EE
T ss_pred ---cchhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHhcC--CCcchhhHHH-HHHHHHHcCCCHHHHHhhhceE-Ee
Confidence 0012234556677776654 344444444311 1221 1223332222 222110000 0012334 68
Q ss_pred cCchHHHHHHHHHHHHHcC-cEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCCCCCCChHHH
Q 048009 233 EGGMGSVSMAIGSAAREAG-AHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVPGNILPDDFI 311 (531)
Q Consensus 233 ~gG~~~l~~~l~~~~~~~G-~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~~~~~~~~~~ 311 (531)
+||++.++++|.+.+++.| ++|+++++|++|..++ +++ .|++.+|+++.||+||+|+++..+ .++...+.+|+...
T Consensus 251 ~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~-~~v-~v~~~~g~~~~ad~vI~a~~~~~l-~~i~~~p~lp~~~~ 327 (495)
T 2vvm_A 251 KDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNER-DAA-RVTARDGREFVAKRVVCTIPLNVL-STIQFSPALSTERI 327 (495)
T ss_dssp TTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECS-SSE-EEEETTCCEEEEEEEEECCCGGGG-GGSEEESCCCHHHH
T ss_pred CCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcC-CEE-EEEECCCCEEEcCEEEECCCHHHH-hheeeCCCCCHHHH
Confidence 9999999999999999998 9999999999999876 555 488889988999999999998884 56653445888888
Q ss_pred HHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEEEEeCCCCC
Q 048009 312 LSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIEMTIPSVLD 391 (531)
Q Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d 391 (531)
+.++.+.+ .++.++++.++++. +. . ...+... +.+..++..
T Consensus 328 ~ai~~~~~-~~~~kv~l~~~~~~-~~------------~--~~g~~~~------------------~~~~~~~~~----- 368 (495)
T 2vvm_A 328 SAMQAGHV-SMCTKVHAEVDNKD-MR------------S--WTGIAYP------------------FNKLCYAIG----- 368 (495)
T ss_dssp HHHHHCCC-CCCEEEEEEESCGG-GG------------G--EEEEECS------------------SCSSCEEEE-----
T ss_pred HHHHhcCC-CceeEEEEEECCcc-CC------------C--ceeEecC------------------CCCcEEEec-----
Confidence 88988887 67789999998732 11 1 1111000 011111111
Q ss_pred CCCCCCCceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCceeEEEecCcchHHHHhCCCCCccccc
Q 048009 392 KTISPPGNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFSSSIIGYDMLTPPDLEREIGLTGGNIFHG 471 (531)
Q Consensus 392 ~~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~~~~~~~~~~~G~~~~~ 471 (531)
....|.|+.+++.++. . .. .+.+ ++..+.+++.|++++|+..+ +....+ ..|.+.. ...|++-.
T Consensus 369 ~~~~~~~~~vl~~~~~-~-~~----~~~~----~e~~~~~~~~L~~~~~~~~~-~~~~~~---~~W~~dp-~~~g~y~~- 432 (495)
T 2vvm_A 369 DGTTPAGNTHLVCFGN-S-AN----HIQP----DEDVRETLKAVGQLAPGTFG-VKRLVF---HNWVKDE-FAKGAWFF- 432 (495)
T ss_dssp EEECTTSCEEEEEEEC-S-TT----CCCT----TTCHHHHHHHHHTTSTTSCC-EEEEEE---CCTTTCT-TTSSSSCC-
T ss_pred CCCCCCCCeEEEEEeC-c-cc----cCCC----HHHHHHHHHHHHHhcCCCCC-ceEEEE---eEcCCCC-CCCCCccC-
Confidence 1124556666666542 1 11 1232 23456678889999886432 221111 1232111 11122110
Q ss_pred CCCccccccCCCCCCCCCCCCCCCCeeecCCCCCC--CCCcCCc--hHHHHHHHHHHHhhh
Q 048009 472 AMGLDSLFLMRPVKGWSNYRTPLQGLYMCGSGTHP--GGGVMGA--PGRNAAGIVLQDLKK 528 (531)
Q Consensus 472 ~~~~~~~~~~rp~~~~~~~~t~~~~ly~aG~~~~~--g~g~~~~--sg~~aa~~i~~~~~~ 528 (531)
..+.+....++ ..++|++||||||+++.+ .+.+.|| ||+.||++|++.+++
T Consensus 433 -~~~g~~~~~~~-----~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~~ 487 (495)
T 2vvm_A 433 -SRPGMVSECLQ-----GLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELGT 487 (495)
T ss_dssp -CCTTHHHHHHH-----HHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHCC
T ss_pred -cCCCcchhhHH-----HHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhcc
Confidence 11111100111 234568999999999964 3556777 999999999998754
No 8
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.96 E-value=5.9e-29 Score=252.82 Aligned_cols=241 Identities=14% Similarity=0.166 Sum_probs=151.3
Q ss_pred ccccccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCCCCCCC
Q 048009 228 IWSYVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVPGNILP 307 (531)
Q Consensus 228 ~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~~~~~~ 307 (531)
.+.+++||++.|+++|++.+.+ ++|+++++|++|..++ +++ .|++.+|+++.||+||+|++++.+ .++++...
T Consensus 226 ~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~-~~~-~v~~~~g~~~~ad~vi~a~p~~~~-~~l~~~~~-- 298 (470)
T 3i6d_A 226 QFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHSG-SCY-SLELDNGVTLDADSVIVTAPHKAA-AGMLSELP-- 298 (470)
T ss_dssp -EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEECS-SSE-EEEESSSCEEEESEEEECSCHHHH-HHHTTTST--
T ss_pred eEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEcC-CeE-EEEECCCCEEECCEEEECCCHHHH-HHHcCCch--
Confidence 4457899999999999886654 7999999999999887 554 488999988999999999998884 67775532
Q ss_pred hHHHHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEEEEeC
Q 048009 308 DDFILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIEMTIP 387 (531)
Q Consensus 308 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (531)
....++.+++ .++.++++.++++. +. ......+.+.. .+ ...+...+.+.
T Consensus 299 --~~~~~~~~~~-~~~~~v~l~~~~~~-~~--------~~~~~~g~l~~-~~-----------------~~~~~~~~~~~ 348 (470)
T 3i6d_A 299 --AISHLKNMHS-TSVANVALGFPEGS-VQ--------MEHEGTGFVIS-RN-----------------SDFAITACTWT 348 (470)
T ss_dssp --THHHHHTCEE-EEEEEEEEEESSTT-CC--------CSSCSSEEEEC-ST-----------------TCCSEEEEEEH
T ss_pred --hhHHHhcCCC-CceEEEEEEECchh-cC--------CCCCCeEEEcc-CC-----------------CCCCceEEEEE
Confidence 2456777777 67899999998753 21 11112222222 11 01123335555
Q ss_pred CCCCCCCCCCCceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCceeEEEecCcchHHHHhCCCCCc
Q 048009 388 SVLDKTISPPGNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFSSSIIGYDMLTPPDLEREIGLTGGN 467 (531)
Q Consensus 388 s~~d~~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~~~~~~~~~~~G~ 467 (531)
|...+..+|.|+.++.+++. .++. ..+.. ...+++.+.+++.|++++|...+.+.......+..+..| ..|.
T Consensus 349 s~~~~~~~p~~~~~l~~~~~-~~~~---~~~~~-~~~~~~~~~~~~~l~~~~g~~~~p~~~~~~~w~~a~p~~---~~g~ 420 (470)
T 3i6d_A 349 NKKWPHAAPEGKTLLRAYVG-KAGD---ESIVD-LSDNDIINIVLEDLKKVMNINGEPEMTCVTRWHESMPQY---HVGH 420 (470)
T ss_dssp HHHCGGGSCTTCEEEEEEEC-CSSC---CGGGT-SCHHHHHHHHHHHHGGGSCCCSCCSEEEEEEEEEEEEEC---BTTH
T ss_pred cCcCCCcCCCCCEEEEEEEC-CCCC---ccccC-CCHHHHHHHHHHHHHHHhCCCCCceEEEEEEcCCccCCC---CCCH
Confidence 55556678888887777652 2221 11111 124889999999999999754322211111111111000 0010
Q ss_pred ccccCCCccccccCCCCCCCCCCCCCCCCeeecCCCCCCCCCcCCc--hHHHHHHHHHHHh
Q 048009 468 IFHGAMGLDSLFLMRPVKGWSNYRTPLQGLYMCGSGTHPGGGVMGA--PGRNAAGIVLQDL 526 (531)
Q Consensus 468 ~~~~~~~~~~~~~~rp~~~~~~~~t~~~~ly~aG~~~~~g~g~~~~--sg~~aa~~i~~~~ 526 (531)
. .+...+++ ...++++|||+||+++. |.|+++| ||+.+|++|++.+
T Consensus 421 ~-------~~~~~~~~-----~l~~~~~~l~~aG~~~~-g~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 421 K-------QRIKELRE-----ALASAYPGVYMTGASFE-GVGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp H-------HHHHHHHH-----HHHHHSTTEEECSTTTS-CCSHHHHHHHHHHHHHHHHHHH
T ss_pred H-------HHHHHHHH-----HHHhhCCCEEEEeecCC-CCCHHHHHHHHHHHHHHHHHHh
Confidence 0 00001111 12245689999999985 6678887 9999999999876
No 9
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.95 E-value=9.1e-29 Score=253.33 Aligned_cols=426 Identities=16% Similarity=0.162 Sum_probs=225.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccccCCeeecccchhhhcchhhhhhc----Ccccccc
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSLIKC----GTRIGET 91 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~~g~~~d~g~~~~~~~~~~~~~~----gl~~~~~ 91 (531)
..+||+|||||++||+||+.|+++|++|+|+|+++++||++.+.. ..|+.+|.|++++....+.+.+. |+.....
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~~~~~ 90 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVS-QDGLIWDEGANTMTESEGDVTFLIDSLGLREKQQ 90 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEE-ETTEEEESSCCCBCCCSHHHHHHHHHTTCGGGEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeec-cCCeEEecCCcccccCcHHHHHHHHHcCCcccce
Confidence 358999999999999999999999999999999999999999876 67999999988765444443332 5532211
Q ss_pred hhh-----h-ccchhhhHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcchhhhhhhhhhhhhHHHHHHHHHhcChhhH
Q 048009 92 WNE-----V-VEAKSIIVYAIFEDQLDKFSQFVDLLFDSSPPELLQGSSSYSHQFKNKIRNSAFWAHCLRRAISLGQKDL 165 (531)
Q Consensus 92 ~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (531)
+.. + ........++. .. .. +.... .....++..... ..+ .......
T Consensus 91 ~~~~~~~~~~~~~g~~~~~p~---~~---~~----~~~~~-------~~~~~~~~~~~~-------~~~----~~~~~~~ 142 (504)
T 1sez_A 91 FPLSQNKRYIARNGTPVLLPS---NP---ID----LIKSN-------FLSTGSKLQMLL-------EPI----LWKNKKL 142 (504)
T ss_dssp CCSSCCCEEEESSSSEEECCS---SH---HH----HHHSS-------SSCHHHHHHHHT-------HHH----HC-----
T ss_pred eccCCCceEEEECCeEEECCC---CH---HH----Hhccc-------cCCHHHHHHHhH-------hhh----ccCcccc
Confidence 100 0 00000000000 00 00 00000 000000000000 000 0000000
Q ss_pred HHHHHHHhccHHHHhhcccCChhHHHHHhh--hhhhccCCCCCCCChHHH--HHHH---------------Hhhcc----
Q 048009 166 VEFVDLLLSPASKVLNKWFETDVLKATLAT--DAVIGTMSSVHTPGSGYV--LLHH---------------VMGET---- 222 (531)
Q Consensus 166 ~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~~g~~~~~~~~~~~~~--~~~~---------------~~~~~---- 222 (531)
.. ......++.+++.+.+.++.++.++.. ..+.+. .+........ .+.. .+...
T Consensus 143 ~~-~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 219 (504)
T 1sez_A 143 SQ-VSDSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGG--DPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKK 219 (504)
T ss_dssp ------CCCBHHHHHHHHHCHHHHHTTHHHHHHHHHSC--CGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC------
T ss_pred cc-cCCCCccHHHHHHHHcCHHHHHHHHHHHHccccCC--ChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhccccccc
Confidence 00 011235666666666655544443331 112221 1111111100 0000 00000
Q ss_pred ----------CCCCCccccccCchHHHHHHHHHHHHHcC-cEEEcCcceeEEEecCCCc-----eeEEEeC--CC---cE
Q 048009 223 ----------DGNPGIWSYVEGGMGSVSMAIGSAAREAG-AHIVTRAEVSQLMINDSGR-----VNGVQLA--DG---AQ 281 (531)
Q Consensus 223 ----------~~~~~~~~~~~gG~~~l~~~l~~~~~~~G-~~i~~~~~V~~I~~~~~g~-----~~~V~~~--~g---~~ 281 (531)
....+.+ +++||++.|+++|++.+ + ++|++|++|++|..++ ++ .+.|++. +| ++
T Consensus 220 ~~~~~~~~~~~~~~~~~-~~~GG~~~l~~~l~~~l---~~~~i~~~~~V~~I~~~~-~~~~~~~~~~v~~~~~~g~~~~~ 294 (504)
T 1sez_A 220 QGPPKTSANKKRQRGSF-SFLGGMQTLTDAICKDL---REDELRLNSRVLELSCSC-TEDSAIDSWSIISASPHKRQSEE 294 (504)
T ss_dssp ----CCCSCCSTTCSCB-EETTCTHHHHHHHHTTS---CTTTEETTCCEEEEEEEC-SSSSSSCEEEEEEBCSSSSCBCC
T ss_pred ccccchhhccccCCceE-eeCcHHHHHHHHHHhhc---ccceEEcCCeEEEEEecC-CCCcccceEEEEEcCCCCcccee
Confidence 0011334 88999999999998744 4 7899999999999877 44 1446664 45 56
Q ss_pred EEcCeEEecCChHhHHhhcCCC---CCCChHHHHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECC
Q 048009 282 VHSSIVLSNATPYKTFMDLVPG---NILPDDFILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGS 358 (531)
Q Consensus 282 ~~ad~VV~aa~~~~~~~~ll~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (531)
+.||+||+|+++..+ .+++.+ ..+++.. +..+++ .++.++++.++++. +. .. .... .++++.
T Consensus 295 ~~ad~VI~a~p~~~l-~~ll~~~~~~~~~~~~---l~~~~~-~~~~~v~l~~~~~~-~~-------~~-~~~~-~~l~~~ 359 (504)
T 1sez_A 295 ESFDAVIMTAPLCDV-KSMKIAKRGNPFLLNF---IPEVDY-VPLSVVITTFKREN-VK-------YP-LEGF-GVLVPS 359 (504)
T ss_dssp CEESEEEECSCHHHH-HTSEEESSSSBCCCTT---SCCCCE-EEEEEEEEEEEGGG-BS-------SC-CCSS-EEECCG
T ss_pred EECCEEEECCCHHHH-HHHhhcccCCcccHHH---HhcCCC-CceEEEEEEEchhh-cC-------CC-CCce-EEEcCC
Confidence 899999999998885 566621 1233322 455555 57889999988743 21 11 1222 233321
Q ss_pred CCHHHHHHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCCCceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHh
Q 048009 359 ESMEEIHSACQEAVNGLPSRRPIIEMTIPSVLDKTISPPGNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEY 438 (531)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~ 438 (531)
... ..| .+...+.+++..+|..+|+|+.++++++...... .|... .++++.+.+++.|+++
T Consensus 360 ~~~----------~~g----~~~~~~~~~s~~~~~~~p~g~~~l~~~~~g~~~~----~~~~~-~~ee~~~~v~~~L~~~ 420 (504)
T 1sez_A 360 KEQ----------QHG----LKTLGTLFSSMMFPDRAPNNVYLYTTFVGGSRNR----ELAKA-SRTELKEIVTSDLKQL 420 (504)
T ss_dssp GGG----------GGT----CCSSEEEEHHHHCGGGSCTTEEEEEEEEESTTCG----GGTTC-CHHHHHHHHHHHHHHH
T ss_pred CCC----------CCC----CccceEEeeccccCCcCCCCCEEEEEEeCCCCcc----cccCC-CHHHHHHHHHHHHHHH
Confidence 100 011 1222344555667778899988887765422111 22221 2488999999999999
Q ss_pred CCCCCCceeEEEecCcchHHHHhCCCCCcccccCCCccccccCCCCCCCCCCCCCCCCeeecCCCCCCCCCcCCc--hHH
Q 048009 439 APGFSSSIIGYDMLTPPDLEREIGLTGGNIFHGAMGLDSLFLMRPVKGWSNYRTPLQGLYMCGSGTHPGGGVMGA--PGR 516 (531)
Q Consensus 439 ~P~~~~~i~~~~~~tp~~~~~~~~~~~G~~~~~~~~~~~~~~~rp~~~~~~~~t~~~~ly~aG~~~~~g~g~~~~--sg~ 516 (531)
+|.-.+.+.......+..+..| ..| |. . .... .+ ...++++||||||+++. |.++++| ||+
T Consensus 421 ~g~~~~p~~~~~~~w~~~~p~~---~~g--~~-~-~~~~---~~------~~~~~~~~l~~aG~~~~-g~~v~gai~sG~ 483 (504)
T 1sez_A 421 LGAEGEPTYVNHLYWSKAFPLY---GHN--YD-S-VLDA---ID------KMEKNLPGLFYAGNHRG-GLSVGKALSSGC 483 (504)
T ss_dssp HCBCSCCSSEEEEEEEEEEECC---CTT--HH-H-HHHH---HH------HHHHHSTTEEECCSSSS-CSSHHHHHHHHH
T ss_pred hCCCCCCeEEEEeECCCCCCcc---CcC--HH-H-HHHH---HH------HHHHhCCCEEEEeecCC-CCCHHHHHHHHH
Confidence 8752211111111111111111 001 00 0 0000 01 22356799999999996 6788887 999
Q ss_pred HHHHHHHHHhhhh
Q 048009 517 NAAGIVLQDLKKS 529 (531)
Q Consensus 517 ~aa~~i~~~~~~~ 529 (531)
.||++|++.++..
T Consensus 484 ~aA~~il~~l~~~ 496 (504)
T 1sez_A 484 NAADLVISYLESV 496 (504)
T ss_dssp HHHHHHHHHHSSC
T ss_pred HHHHHHHHHHhhc
Confidence 9999999987643
No 10
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.95 E-value=1.4e-27 Score=243.53 Aligned_cols=249 Identities=14% Similarity=0.127 Sum_probs=160.4
Q ss_pred CccccccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCC---cEEEcCeEEecCChHhHHhhcCCC
Q 048009 227 GIWSYVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADG---AQVHSSIVLSNATPYKTFMDLVPG 303 (531)
Q Consensus 227 ~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g---~~~~ad~VV~aa~~~~~~~~ll~~ 303 (531)
..+.+++||++.|+++|++.+.+ ++|++|++|++|..++ +++. |++.+| +++.||+||+|+++.. +.+|..
T Consensus 229 ~~~~~~~gG~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~-~~v~-v~~~~g~~~~~~~ad~vI~a~p~~~-l~~l~~- 302 (489)
T 2jae_A 229 MMMFTPVGGMDRIYYAFQDRIGT--DNIVFGAEVTSMKNVS-EGVT-VEYTAGGSKKSITADYAICTIPPHL-VGRLQN- 302 (489)
T ss_dssp SSEEEETTCTTHHHHHHHHHHCG--GGEETTCEEEEEEEET-TEEE-EEEEETTEEEEEEESEEEECSCHHH-HTTSEE-
T ss_pred ccEEeecCCHHHHHHHHHHhcCC--CeEEECCEEEEEEEcC-CeEE-EEEecCCeEEEEECCEEEECCCHHH-HHhCcc-
Confidence 34458999999999999887643 7899999999999887 6655 777776 5799999999998886 566654
Q ss_pred CCCChHHHHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEE
Q 048009 304 NILPDDFILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIE 383 (531)
Q Consensus 304 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (531)
.+|+...+.+++++| .+++++++.++++. +. +. ....|.+.. ++.+...
T Consensus 303 -~l~~~~~~~l~~~~~-~~~~kv~l~~~~~~-w~-------~~-~~~~g~~~~--------------------~~~~~~~ 351 (489)
T 2jae_A 303 -NLPGDVLTALKAAKP-SSSGKLGIEYSRRW-WE-------TE-DRIYGGASN--------------------TDKDISQ 351 (489)
T ss_dssp -CCCHHHHHHHHTEEC-CCEEEEEEEESSCH-HH-------HT-TCCCSCEEE--------------------ESSTTCE
T ss_pred -CCCHHHHHHHHhCCC-ccceEEEEEeCCCC-cc-------CC-CCccccccc--------------------CCCCceE
Confidence 488888889999988 57899999998742 21 00 011111111 1224456
Q ss_pred EEeCCCCCCCCCCCCceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCC-CCCceeEEEecCcchHHHHhC
Q 048009 384 MTIPSVLDKTISPPGNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPG-FSSSIIGYDMLTPPDLEREIG 462 (531)
Q Consensus 384 ~~~~s~~d~~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~-~~~~i~~~~~~tp~~~~~~~~ 462 (531)
+.+++..++ .|+ ..++..++...... .|... .++++.+.+++.|++++|. +++.+.... +.+|.+...
T Consensus 352 ~~~~s~~~~--~~~-~~l~~~~~~g~~~~----~~~~~-~~~~~~~~~l~~L~~~~~~~~~~~~~~~~---~~~W~~~~~ 420 (489)
T 2jae_A 352 IMFPYDHYN--SDR-GVVVAYYSSGKRQE----AFESL-THRQRLAKAIAEGSEIHGEKYTRDISSSF---SGSWRRTKY 420 (489)
T ss_dssp EECCSSSTT--SSC-EEEEEEEEETHHHH----HHHTS-CHHHHHHHHHHHHHHHHCGGGGSSEEEEE---EEEGGGSTT
T ss_pred EEeCCCCCC--CCC-CEEEEEeeCCchhh----hhhcC-CHHHHHHHHHHHHHHHcCcchhhhccccE---EEEcCCCCC
Confidence 777765442 232 23333343222111 23211 2488999999999999997 776665542 445655422
Q ss_pred CCCCcccccCC----CccccccCCCCCCCCCCCCCCCCeeecCCCC-CCCCCcCCc--hHHHHHHHHHHHhhhh
Q 048009 463 LTGGNIFHGAM----GLDSLFLMRPVKGWSNYRTPLQGLYMCGSGT-HPGGGVMGA--PGRNAAGIVLQDLKKS 529 (531)
Q Consensus 463 ~~~G~~~~~~~----~~~~~~~~rp~~~~~~~~t~~~~ly~aG~~~-~~g~g~~~~--sg~~aa~~i~~~~~~~ 529 (531)
..|++..... .+.+....++ ..++|++||||||+++ ++++++++| ||+.||++|++.+..+
T Consensus 421 -~~G~~~~~~~~~~~~~~~~~~~~~-----~l~~~~~~l~faG~~~~~~~~~v~gAi~sg~~aA~~i~~~l~~~ 488 (489)
T 2jae_A 421 -SESAWANWAGSGGSHGGAATPEYE-----KLLEPVDKIYFAGDHLSNAIAWQHGALTSARDVVTHIHERVAQE 488 (489)
T ss_dssp -TSCSSCEETTC-------CCHHHH-----HHTSCBTTEEECSGGGBSSTTSHHHHHHHHHHHHHHHHHHHHC-
T ss_pred -CCCcchhcccccCCCcccchhhHH-----HHhCCCCcEEEeEHHhccCccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 2333221110 0111101111 2346789999999998 568889998 9999999999987654
No 11
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.95 E-value=3.3e-27 Score=239.26 Aligned_cols=245 Identities=16% Similarity=0.162 Sum_probs=156.6
Q ss_pred ccCchHHHHHHHHHHHHHc--------CcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCC-
Q 048009 232 VEGGMGSVSMAIGSAAREA--------GAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVP- 302 (531)
Q Consensus 232 ~~gG~~~l~~~l~~~~~~~--------G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~- 302 (531)
++||++.++++|.+.+.+. |++|+++++|++|..++ +++. |++.+|+++.||+||+|+++..+ .+++.
T Consensus 201 ~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~-~~v~-v~~~~g~~~~ad~vI~a~~~~~l-~~~~~~ 277 (472)
T 1b37_A 201 DQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSP-GGVT-VKTEDNSVYSADYVMVSASLGVL-QSDLIQ 277 (472)
T ss_dssp CTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECS-SCEE-EEETTSCEEEESEEEECSCHHHH-HTTSSE
T ss_pred cCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcC-CcEE-EEECCCCEEEcCEEEEecCHHHh-ccCCee
Confidence 4899999999999887765 78999999999999887 6665 89999988999999999998885 44332
Q ss_pred -CCCCChHHHHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCe
Q 048009 303 -GNILPDDFILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPI 381 (531)
Q Consensus 303 -~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (531)
.+.+|+.+.++++.+.+ .++.++++.++++. +. + .+.. +.+...+.. .+ ...
T Consensus 278 ~~p~Lp~~~~~ai~~~~~-~~~~kv~l~~~~~~-w~-------~-~~~~-~~~~~~~~~------------~~----~~~ 330 (472)
T 1b37_A 278 FKPKLPTWKVRAIYQFDM-AVYTKIFLKFPRKF-WP-------E-GKGR-EFFLYASSR------------RG----YYG 330 (472)
T ss_dssp EESCCCHHHHHHHHHSEE-ECEEEEEEECSSCC-SC-------C-STTC-SEEEECCSS------------TT----SSC
T ss_pred ECCCCCHHHHHHHHhcCC-cceeEEEEECCCcC-CC-------C-CCCc-ceEEecccC------------Cc----cce
Confidence 35588888889998887 57789999998742 21 1 1111 122221110 01 011
Q ss_pred EEEEeCCCCCCCCCCCCceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCC--CceeEEEecCcchHHH
Q 048009 382 IEMTIPSVLDKTISPPGNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFS--SSIIGYDMLTPPDLER 459 (531)
Q Consensus 382 ~~~~~~s~~d~~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~--~~i~~~~~~tp~~~~~ 459 (531)
++... |++ .| |..++.+++...... .|... .++++.+.+++.|++++|+.. +.+ ...+.++.+.
T Consensus 331 ~~~~~----~~~-~p-~~~~l~~~~~~~~a~----~~~~~-~~~e~~~~~l~~L~~~~Pg~~~~~~~-~~~~~~W~~~-- 396 (472)
T 1b37_A 331 VWQEF----EKQ-YP-DANVLLVTVTDEESR----RIEQQ-SDEQTKAEIMQVLRKMFPGKDVPDAT-DILVPRWWSD-- 396 (472)
T ss_dssp EEEEC----TTT-ST-TCCEEEEEEEHHHHH----HHHTS-CHHHHHHHHHHHHHHHCTTSCCCCCS-EEECCCTTTC--
T ss_pred eeecc----cCC-CC-CCCEEEEEechHHHH----HHHhC-CHHHHHHHHHHHHHHHcCCCCCCCCc-eEEecccCCC--
Confidence 22221 333 34 556666654311100 12111 258999999999999999853 333 2233333221
Q ss_pred HhCCCCCcccccCCCccccccCCCCCCCCCCCCCCCCeeecCCCCCC--CCCcCCc--hHHHHHHHHHHHhhhh
Q 048009 460 EIGLTGGNIFHGAMGLDSLFLMRPVKGWSNYRTPLQGLYMCGSGTHP--GGGVMGA--PGRNAAGIVLQDLKKS 529 (531)
Q Consensus 460 ~~~~~~G~~~~~~~~~~~~~~~rp~~~~~~~~t~~~~ly~aG~~~~~--g~g~~~~--sg~~aa~~i~~~~~~~ 529 (531)
....|++......... ..++ ..++|++||||||+++++ +++++|| ||+.||++|++.+++.
T Consensus 397 --~~~~G~~~~~~~g~~~--~~~~-----~l~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~~ 461 (472)
T 1b37_A 397 --RFYKGTFSNWPVGVNR--YEYD-----QLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQKK 461 (472)
T ss_dssp --TTTSSSEEECBTTCCH--HHHH-----HHHCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred --CCCCcccCCCCCCCCh--hHHH-----HHhccCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHhC
Confidence 1123432211111110 0112 456789999999999987 5678888 9999999999987653
No 12
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.95 E-value=4e-27 Score=239.60 Aligned_cols=243 Identities=15% Similarity=0.120 Sum_probs=149.6
Q ss_pred cccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCCCCCCChHH
Q 048009 231 YVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVPGNILPDDF 310 (531)
Q Consensus 231 ~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~~~~~~~~~ 310 (531)
+++||++.++++|++.++++|++|+++++|++|..++ ++++.|++ ++.++.||+||+|++++.+ .+|+++ .++..
T Consensus 228 ~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~-~~~~~v~~-~~~~~~ad~vv~a~p~~~~-~~ll~~--~~~~~ 302 (477)
T 3nks_A 228 SLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQA-EGRWKVSL-RDSSLEADHVISAIPASVL-SELLPA--EAAPL 302 (477)
T ss_dssp EETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECG-GGCEEEEC-SSCEEEESEEEECSCHHHH-HHHSCG--GGHHH
T ss_pred EECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcC-CceEEEEE-CCeEEEcCEEEECCCHHHH-HHhccc--cCHHH
Confidence 8899999999999999999999999999999999876 55455766 4556999999999998884 778765 45667
Q ss_pred HHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEEEEeCCCC
Q 048009 311 ILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIEMTIPSVL 390 (531)
Q Consensus 311 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 390 (531)
.+.+.++++ .++.++++.++++. ++ ....|.+.. .. .....+.+.+.|..
T Consensus 303 ~~~l~~~~~-~~~~~v~l~~~~~~-~~----------~~~~g~l~~-~~-----------------~~~~~~~~~~~s~~ 352 (477)
T 3nks_A 303 ARALSAITA-VSVAVVNLQYQGAH-LP----------VQGFGHLVP-SS-----------------EDPGVLGIVYDSVA 352 (477)
T ss_dssp HHHHHTCCE-EEEEEEEEEETTCC-CS----------SCSSEEECC-TT-----------------TCSSEEEEECHHHH
T ss_pred HHHHhcCCC-CcEEEEEEEECCCC-CC----------CCCceEEcc-CC-----------------CCCCceEEEEeccc
Confidence 788888887 67788999998742 21 112222221 11 01234445555544
Q ss_pred CCCCC-CCCceEEEEEeccccCC-CCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCceeEEEecCcchHHHHhCCCCCcc
Q 048009 391 DKTIS-PPGNHVINLFIQYTPYK-PSDGSWMDPAYRDSFANRCFSLIDEYAPGFSSSIIGYDMLTPPDLEREIGLTGGNI 468 (531)
Q Consensus 391 d~~~a-p~G~~~l~~~~~~~~~~-~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~~~~~~~~~~~G~~ 468 (531)
.|... |+|+.++++++....+. ..+..|.. .++++.+.+++.|+++++...+.........+..+..| ..
T Consensus 353 ~~~~~~~~~~~~l~~~~gg~~~~~~~~~~~~~--~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~a~p~~------~~ 424 (477)
T 3nks_A 353 FPEQDGSPPGLRVTVMLGGSWLQTLEASGCVL--SQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQY------TL 424 (477)
T ss_dssp CGGGSTTTTCEEEEEEECHHHHHHHHHSSCCC--CHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEEEEECC------BT
T ss_pred cCCCCCCCCceEEEEEECCccccccccccCCC--CHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCCccCCC------CC
Confidence 45433 44788887775422111 00001211 24889999999999987432221111111112111111 11
Q ss_pred cccCCCccccccCCCCCCCCCCCCCCCCeeecCCCCCCCCCcCCc--hHHHHHHHHHHHh
Q 048009 469 FHGAMGLDSLFLMRPVKGWSNYRTPLQGLYMCGSGTHPGGGVMGA--PGRNAAGIVLQDL 526 (531)
Q Consensus 469 ~~~~~~~~~~~~~rp~~~~~~~~t~~~~ly~aG~~~~~g~g~~~~--sg~~aa~~i~~~~ 526 (531)
.+. ..... .+. ......+|||+||+|. .|.|+++| ||+.||++|+.+.
T Consensus 425 g~~-~~~~~---~~~-----~l~~~~~~l~l~G~~~-~G~gv~~a~~sg~~aA~~il~~~ 474 (477)
T 3nks_A 425 GHW-QKLES---ARQ-----FLTAHRLPLTLAGASY-EGVAVNDCIESGRQAAVSVLGTE 474 (477)
T ss_dssp THH-HHHHH---HHH-----HHHHTTCSEEECSTTT-SCCSHHHHHHHHHHHHHHHHHCC
T ss_pred CHH-HHHHH---HHH-----HHHhcCCCEEEEccCC-CCCcHHHHHHHHHHHHHHHHhcc
Confidence 000 00000 000 0001136899999997 68899988 9999999998753
No 13
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.95 E-value=1.6e-27 Score=242.29 Aligned_cols=239 Identities=14% Similarity=0.193 Sum_probs=148.9
Q ss_pred CccccccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCCCCCC
Q 048009 227 GIWSYVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVPGNIL 306 (531)
Q Consensus 227 ~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~~~~~ 306 (531)
+.+.+++||++.++++|++.+.+ ++|+++++|++|..++ +++. |++.+| ++.||+||+|++++.+ .+|++...+
T Consensus 226 ~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~-~~~~-v~~~~g-~~~ad~vV~a~p~~~~-~~ll~~~~~ 299 (475)
T 3lov_A 226 GQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISRED-GRYR-LKTDHG-PEYADYVLLTIPHPQV-VQLLPDAHL 299 (475)
T ss_dssp CSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEET-TEEE-EECTTC-CEEESEEEECSCHHHH-HHHCTTSCC
T ss_pred CcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEeC-CEEE-EEECCC-eEECCEEEECCCHHHH-HHHcCccCH
Confidence 44558999999999999887754 7999999999999877 6554 888889 6999999999998884 678765433
Q ss_pred ChHHHHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEEEEe
Q 048009 307 PDDFILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIEMTI 386 (531)
Q Consensus 307 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (531)
..+..+++ .++.++++.++++... .....+.+.. .+ .......+++
T Consensus 300 -----~~~~~~~~-~~~~~v~l~~~~~~~~----------~~~g~g~l~~-~~-----------------~~~~~~~~~~ 345 (475)
T 3lov_A 300 -----PELEQLTT-HSTATVTMIFDQQQSL----------PIEGTGFVVN-RR-----------------APYSITACTA 345 (475)
T ss_dssp -----HHHHTCCE-EEEEEEEEEEECCSSC----------SSSSSEEEEC-TT-----------------SSCSEEEEEE
T ss_pred -----HHHhcCCC-CeEEEEEEEECCcCCC----------CCCCEEEEec-CC-----------------CCCceEEEEE
Confidence 56677777 6789999999875411 0122222222 11 1123344566
Q ss_pred CCCCCCCCCCCCceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCceeEEEecCcchHHHHh-CCCC
Q 048009 387 PSVLDKTISPPGNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFSSSIIGYDMLTPPDLEREI-GLTG 465 (531)
Q Consensus 387 ~s~~d~~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~~~~~~~-~~~~ 465 (531)
.+...+...|. +.++.+++. .+.. ..+.. ...+++.+.+++.|+++++.-. ......+ ..|..-. ....
T Consensus 346 ~s~~~~~~~p~-~~~l~~~~~-~~~~---~~~~~-~~~e~~~~~~~~~L~~~~g~~~-~p~~~~v---~~w~~a~p~~~~ 415 (475)
T 3lov_A 346 IDQKWNHSAPD-HTVLRAFVG-RPGN---DHLVH-ESDEVLQQAVLQDLEKICGRTL-EPKQVII---SRLMDGLPAYTV 415 (475)
T ss_dssp HHHHCTTTCTT-EEEEEEEEC-BTTB---CGGGG-SCHHHHHHHHHHHHHHHHSSCC-CCSEEEE---EEEEEEEECCCT
T ss_pred EcccCCCCCCC-cEEEEEEeC-CCCC---CcccC-CCHHHHHHHHHHHHHHHhCCCC-CCeEEEE---EEcccCCCCCCC
Confidence 66666777777 666666642 2211 01111 1247899999999999986422 2211111 1111100 0011
Q ss_pred CcccccCCCccccccCCCCCCCCCCCCCCCCeeecCCCCCCCCCcCCc--hHHHHHHHHHHHhhh
Q 048009 466 GNIFHGAMGLDSLFLMRPVKGWSNYRTPLQGLYMCGSGTHPGGGVMGA--PGRNAAGIVLQDLKK 528 (531)
Q Consensus 466 G~~~~~~~~~~~~~~~rp~~~~~~~~t~~~~ly~aG~~~~~g~g~~~~--sg~~aa~~i~~~~~~ 528 (531)
|.. ......++ ...++++||||||+++. |.|+++| ||+.+|++|++.++.
T Consensus 416 g~~-------~~~~~~~~-----~l~~~~~~l~~aG~~~~-g~g~~~a~~sG~~aA~~i~~~l~~ 467 (475)
T 3lov_A 416 GHA-------DRIQRVRE-----EVLAQYPGIYLAGLAYD-GVGLPDCVASAKTMIESIELEQSH 467 (475)
T ss_dssp THH-------HHHHHHHH-----HHHHHSTTEEECSTTTS-CSSHHHHHHHHHHHHHHHHHTC--
T ss_pred ChH-------HHHHHHHH-----HHHhhCCCEEEEccCCC-CCCHHHHHHHHHHHHHHHHHHhhc
Confidence 100 00001111 12345789999999986 5678888 999999999987754
No 14
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.94 E-value=3e-26 Score=235.43 Aligned_cols=93 Identities=18% Similarity=0.265 Sum_probs=76.2
Q ss_pred cccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCCCCCCChHH
Q 048009 231 YVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVPGNILPDDF 310 (531)
Q Consensus 231 ~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~~~~~~~~~ 310 (531)
.++||++.|+++|++.+++.|++|+++++|++|..++ ++ |++.||+++.||+||+|+++.. +.+++++ +..
T Consensus 216 ~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~-~~---v~~~~G~~~~ad~vI~t~P~~~-l~~~l~~----~~~ 286 (513)
T 4gde_A 216 PARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANN-KT---VTLQDGTTIGYKKLVSTMAVDF-LAEAMND----QEL 286 (513)
T ss_dssp ESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTT-TE---EEETTSCEEEEEEEEECSCHHH-HHHHTTC----HHH
T ss_pred cccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccC-CE---EEEcCCCEEECCEEEECCCHHH-HHHhcCc----hhh
Confidence 4589999999999999999999999999999999876 43 6689999999999999877776 5677643 345
Q ss_pred HHHhhccCCCCCeEEEeeecCCC
Q 048009 311 ILSIKHSDYSSGTTKINLAVDKL 333 (531)
Q Consensus 311 ~~~i~~~~~~~~~~~~~~~~~~~ 333 (531)
......++| .++.+++++++..
T Consensus 287 ~~~~~~l~y-~~~~~v~l~~~~~ 308 (513)
T 4gde_A 287 VGLTKQLFY-SSTHVIGVGVRGS 308 (513)
T ss_dssp HHHHTTCCE-EEEEEEEEEEESS
T ss_pred HhhhhcccC-CceEEEEEEEecc
Confidence 556677777 6778888888753
No 15
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.94 E-value=1.3e-25 Score=225.47 Aligned_cols=189 Identities=13% Similarity=0.135 Sum_probs=122.9
Q ss_pred HhccHHHHhhcccCChhHHHHHhhhhhhccCCCC-CCCChHHHH---HHHHhhccCCCCCccccccCchHHHHHHHHHHH
Q 048009 172 LLSPASKVLNKWFETDVLKATLATDAVIGTMSSV-HTPGSGYVL---LHHVMGETDGNPGIWSYVEGGMGSVSMAIGSAA 247 (531)
Q Consensus 172 ~~~~~~~~l~~~~~~~~l~~~~~~~~~~g~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~~ 247 (531)
...++.+++.+++.++.++..+............ ..+ ....+ ..+.........+.|.+|+||++.++++|++.+
T Consensus 174 ~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~~~p-~~~~~~~~~~~~~s~~~~~~~~~~~p~gG~~~l~~al~~~~ 252 (453)
T 2bcg_G 174 DKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQP-ARPSFERILLYCQSVARYGKSPYLYPMYGLGELPQGFARLS 252 (453)
T ss_dssp TTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSB-HHHHHHHHHHHHHHHHHHSSCSEEEETTCTTHHHHHHHHHH
T ss_pred ccCCHHHHHHHhCCCHHHHHHHHHHHHhccCccccCCc-hHHHHHHHHHHHHHHHhhcCCceEeeCCCHHHHHHHHHHHH
Confidence 3567788888888888888876532211100001 112 12211 222111111124567799999999999999999
Q ss_pred HHcCcEEEcCcceeEEEec--CCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCCCCCCChHHHHHhhccC-CCCCeE
Q 048009 248 REAGAHIVTRAEVSQLMIN--DSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVPGNILPDDFILSIKHSD-YSSGTT 324 (531)
Q Consensus 248 ~~~G~~i~~~~~V~~I~~~--~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~~~~~~~~~~~~i~~~~-~~~~~~ 324 (531)
++.|++|+++++|++|..+ + +++++|++ +|+++.||+||+|++++. .++ .+.+ ++.+.+
T Consensus 253 ~~~G~~i~~~~~V~~i~~~~~~-~~~~~V~~-~g~~~~ad~VV~a~~~~~--~~l--------------~~~~~~~~~~~ 314 (453)
T 2bcg_G 253 AIYGGTYMLDTPIDEVLYKKDT-GKFEGVKT-KLGTFKAPLVIADPTYFP--EKC--------------KSTGQRVIRAI 314 (453)
T ss_dssp HHTTCEEECSCCCCEEEEETTT-TEEEEEEE-TTEEEECSCEEECGGGCG--GGE--------------EEEEEEEEEEE
T ss_pred HHcCCEEECCCEEEEEEEECCC-CeEEEEEE-CCeEEECCEEEECCCccc--hhh--------------cccCCcceeEE
Confidence 9999999999999999987 6 88888887 477899999999999885 222 1222 334445
Q ss_pred EEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCCCceEEEE
Q 048009 325 KINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIEMTIPSVLDKTISPPGNHVINL 404 (531)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~ 404 (531)
++ ++++.+.. ....|+ .+.++. +..+.++.++++.+|..| ++||+|++++++
T Consensus 315 ~i---~~~~~~~~--------~~~~~~-~ii~~~---------------~~~~~~~~~~v~~~s~~d-~~aP~G~~~~~v 366 (453)
T 2bcg_G 315 CI---LNHPVPNT--------SNADSL-QIIIPQ---------------SQLGRKSDIYVAIVSDAH-NVCSKGHYLAII 366 (453)
T ss_dssp EE---ESSCCTTS--------TTCSSE-EEEECG---------------GGTTCSSCEEEEEEEGGG-TSSCTTCEEEEE
T ss_pred EE---EccccCCC--------CCCccE-EEEeCc---------------cccCCCCCEEEEEeCCCC-CCCCCCcEEEEE
Confidence 44 55532110 012232 455521 124567899999999988 899999999998
Q ss_pred Eec
Q 048009 405 FIQ 407 (531)
Q Consensus 405 ~~~ 407 (531)
++.
T Consensus 367 ~~~ 369 (453)
T 2bcg_G 367 STI 369 (453)
T ss_dssp EEE
T ss_pred EEe
Confidence 864
No 16
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.93 E-value=9.5e-25 Score=223.06 Aligned_cols=435 Identities=16% Similarity=0.055 Sum_probs=224.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccc-cCCeeecccchhhhcchhhhhhc----Cccccc
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEEL-IPGFKFSRCSYLQSLLRPSLIKC----GTRIGE 90 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~-~~g~~~d~g~~~~~~~~~~~~~~----gl~~~~ 90 (531)
..+||+|||||++||+||+.|+++|++|+|+|+++++||++.+... ..|+.+|.|++++....+.+.+. |+....
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~ 111 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLRLNE 111 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCCcee
Confidence 4689999999999999999999999999999999999999977642 46888999887654333222221 543110
Q ss_pred c----hhhhc-cchhhhHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcchhhhhhhhhhhhhHHHHHHHHHhcChhhH
Q 048009 91 T----WNEVV-EAKSIIVYAIFEDQLDKFSQFVDLLFDSSPPELLQGSSSYSHQFKNKIRNSAFWAHCLRRAISLGQKDL 165 (531)
Q Consensus 91 ~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (531)
. ..... ........... ... ...+.. ............+.....+ .............
T Consensus 112 ~~~~~~~~~~~~~g~~~~~~~~-------~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-- 174 (498)
T 2iid_A 112 FSQENDNAWYFIKNIRKKVGEV-------KKD-PGLLKY-PVKPSEAGKSAGQLYEESL------GKVVEELKRTNCS-- 174 (498)
T ss_dssp ECSCCTTSEEEETTEEEEHHHH-------HHC-GGGGCC-CCCGGGTTCCHHHHHHHHT------HHHHHHHHHSCHH--
T ss_pred ecccCCccEEEeCCeeeccccc-------ccC-cccccc-CCCccccCCCHHHHHHHHH------HHHHHHHhhccHH--
Confidence 0 00000 00000000000 000 000000 0000000000000000000 0000000000000
Q ss_pred HHHHHHHhccHHHHhhcccC-ChhHHHHHhhhhhhccCCCCCCCChHHHHHHHHhhccCCCCCccccccCchHHHHHHHH
Q 048009 166 VEFVDLLLSPASKVLNKWFE-TDVLKATLATDAVIGTMSSVHTPGSGYVLLHHVMGETDGNPGIWSYVEGGMGSVSMAIG 244 (531)
Q Consensus 166 ~~~~~~~~~~~~~~l~~~~~-~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~ 244 (531)
.....+...+..+++..... +......+. .+........ ......+..... ......+.++.||+++|+++|+
T Consensus 175 ~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~gG~~~l~~~l~ 248 (498)
T 2iid_A 175 YILNKYDTYSTKEYLIKEGDLSPGAVDMIG--DLLNEDSGYY--VSFIESLKHDDI--FAYEKRFDEIVDGMDKLPTAMY 248 (498)
T ss_dssp HHHHHHTTSBHHHHHHHTSCCCHHHHHHHH--HHTTCGGGTT--SBHHHHHHHHHH--HTTCCCEEEETTCTTHHHHHHH
T ss_pred HHHHHhhhhhHHHHHHHccCCCHHHHHHHH--HhcCcccchh--HHHHHHHHHHhc--cccCcceEEeCCcHHHHHHHHH
Confidence 01112234556666655321 222222221 0111000000 011111110000 0112334478999999999998
Q ss_pred HHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCc----EEEcCeEEecCChHhHHhhcCCCCCCChHHHHHhhccCCC
Q 048009 245 SAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGA----QVHSSIVLSNATPYKTFMDLVPGNILPDDFILSIKHSDYS 320 (531)
Q Consensus 245 ~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~----~~~ad~VV~aa~~~~~~~~ll~~~~~~~~~~~~i~~~~~~ 320 (531)
+.+.+ +|++|++|++|..++ +++ .|++.+|+ ++.||+||+|+++.. +.++...+.+|+.+.++++++.|
T Consensus 249 ~~l~~---~i~~~~~V~~I~~~~-~~v-~v~~~~~~~~~~~~~ad~vI~t~p~~~-~~~i~f~p~Lp~~~~~ai~~l~~- 321 (498)
T 2iid_A 249 RDIQD---KVHFNAQVIKIQQND-QKV-TVVYETLSKETPSVTADYVIVCTTSRA-VRLIKFNPPLLPKKAHALRSVHY- 321 (498)
T ss_dssp HHTGG---GEESSCEEEEEEECS-SCE-EEEEECSSSCCCEEEESEEEECSCHHH-HTTSEEESCCCHHHHHHHHHCCE-
T ss_pred Hhccc---ccccCCEEEEEEECC-CeE-EEEEecCCcccceEEeCEEEECCChHH-HhheecCCCCCHHHHHHHHhCCC-
Confidence 87754 799999999999887 665 47777765 479999999998886 46654334599999999999998
Q ss_pred CCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCCCce
Q 048009 321 SGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIEMTIPSVLDKTISPPGNH 400 (531)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~ 400 (531)
.++.++++.++++. |. +... .+...+ .+.+..++++++. ..|.|..
T Consensus 322 ~~~~kv~l~~~~~~-w~-------~~~~--~~~~~~--------------------~~~~~~~~~~~s~----~~p~g~~ 367 (498)
T 2iid_A 322 RSGTKIFLTCTTKF-WE-------DDGI--HGGKST--------------------TDLPSRFIYYPNH----NFTNGVG 367 (498)
T ss_dssp ECEEEEEEEESSCG-GG-------GGTC--CSSEEE--------------------ESSTTCEEECCSS----CCTTSCE
T ss_pred cceeEEEEEeCCCC-cc-------CCCc--cCCccc--------------------CCCCcceEEECCC----CCCCCCc
Confidence 56889999998742 21 1000 011111 0113334555542 2467777
Q ss_pred EEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCceeE-EEecCcchHHHHhCCCCCcccccCCCccccc
Q 048009 401 VINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFSSSIIG-YDMLTPPDLEREIGLTGGNIFHGAMGLDSLF 479 (531)
Q Consensus 401 ~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~-~~~~tp~~~~~~~~~~~G~~~~~~~~~~~~~ 479 (531)
+|..++...... .|... ..+++.+.+++.|+++++...+.+.. .....-.+|... ....|++.... +.+..
T Consensus 368 ~L~~~~~g~~a~----~~~~~-~~~~~~~~~l~~L~~~~g~~~~~~~~~~~~~~~~~W~~~-p~~~G~~~~~~--~~~~~ 439 (498)
T 2iid_A 368 VIIAYGIGDDAN----FFQAL-DFKDCADIVFNDLSLIHQLPKKDIQSFCYPSVIQKWSLD-KYAMGGITTFT--PYQFQ 439 (498)
T ss_dssp EEEEEEEHHHHH----TTTTS-CHHHHHHHHHHHHHHHHTCCHHHHHHHEEEEEEEEGGGC-TTTCSSEECCC--TTHHH
T ss_pred EEEEEeCCccHh----hhhcC-CHHHHHHHHHHHHHHHcCCChhhhhhhcCccEEEecCCC-CCCCceeeecC--CcchH
Confidence 777654211111 23221 23778999999999988621111100 000011233331 11223321111 11111
Q ss_pred cCCCCCCCCCCCCCCCCeeecCCCCCC-CCCcCCc--hHHHHHHHHHHHhh
Q 048009 480 LMRPVKGWSNYRTPLQGLYMCGSGTHP-GGGVMGA--PGRNAAGIVLQDLK 527 (531)
Q Consensus 480 ~~rp~~~~~~~~t~~~~ly~aG~~~~~-g~g~~~~--sg~~aa~~i~~~~~ 527 (531)
.+++ ..++|++||||||+++.. .++++|| ||+.||++|++.++
T Consensus 440 ~~~~-----~l~~p~~~l~fAGe~t~~~~g~~~GAi~SG~raA~~i~~~l~ 485 (498)
T 2iid_A 440 HFSD-----PLTASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLASE 485 (498)
T ss_dssp HHHH-----HHHCCBTTEEECSGGGSSSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-----HHhCCCCcEEEEEcccccCCcCHHHHHHHHHHHHHHHHHHhc
Confidence 1121 234567999999999943 4567887 99999999998774
No 17
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.93 E-value=3.5e-24 Score=214.90 Aligned_cols=394 Identities=19% Similarity=0.164 Sum_probs=204.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeeccc--ccCCeeecccchhhhcc-hhhhhhc----Ccccc
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEE--LIPGFKFSRCSYLQSLL-RPSLIKC----GTRIG 89 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~--~~~g~~~d~g~~~~~~~-~~~~~~~----gl~~~ 89 (531)
++||+|||||++||+||+.|+++|++|+|+|+++++||+|.+.. +.+|+.++.|+.+.... .+.+++. |++..
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 80 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRKHHPRLAAELDRYGIPTA 80 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTTTCHHHHHHHHHHTCCEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCCCcHHHHHHHHHhCCeee
Confidence 37999999999999999999999999999999999999998654 56799999998765444 4433322 44211
Q ss_pred cch---h--------hhccc--hhhhHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcchhhhhhhhhhhhhHHHHHHH
Q 048009 90 ETW---N--------EVVEA--KSIIVYAIFEDQLDKFSQFVDLLFDSSPPELLQGSSSYSHQFKNKIRNSAFWAHCLRR 156 (531)
Q Consensus 90 ~~~---~--------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (531)
... . .+... ...............+......+....+... .. .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~---~-------------------- 136 (431)
T 3k7m_X 81 AASEFTSFRHRLGPTAVDQAFPIPGSEAVAVEAATYTLLRDAHRIDLEKGLEN-QD---L-------------------- 136 (431)
T ss_dssp ECCCCCEECCBSCTTCCSSSSCCCGGGHHHHHHHHHHHHHHHTTCCTTTCTTS-SS---C--------------------
T ss_pred ecCCCCcEEEEecCCeecCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCccC-cc---h--------------------
Confidence 000 0 00000 0011111111111111111111100000000 00 0
Q ss_pred HHhcChhhHHHHHHHHhccHHHHhhcccCChhHHHHHhh--hhhhccCCCCCCCChHHHHHHHHhhc--c--C-CCCCcc
Q 048009 157 AISLGQKDLVEFVDLLLSPASKVLNKWFETDVLKATLAT--DAVIGTMSSVHTPGSGYVLLHHVMGE--T--D-GNPGIW 229 (531)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~--~--~-~~~~~~ 229 (531)
.... .+..+++......+..+..+.. ....+. .....+... ++...... . . ......
T Consensus 137 ------------~~~d-~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~ 200 (431)
T 3k7m_X 137 ------------EDLD-IPLNEYVDKLDLPPVSRQFLLAWAWNMLGQ--PADQASALW-MLQLVAAHHYSILGVVLSLDE 200 (431)
T ss_dssp ------------GGGC-SBHHHHHHHHTCCHHHHHHHHHHHHHHHSS--CTTTSBHHH-HHHHHHHTTSCHHHHHHTCCE
T ss_pred ------------hhhc-CCHHHHHHhcCCCHHHHHHHHHHHHHhcCC--ChhhhhHHH-HHHHHHhcCCccceeecchhh
Confidence 0001 2223333333333333322211 111111 111111111 11111000 0 0 000111
Q ss_pred ccccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCCCCCCChH
Q 048009 230 SYVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVPGNILPDD 309 (531)
Q Consensus 230 ~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~~~~~~~~ 309 (531)
.+.+|+..+.+.+.+ +.| +|++|++|++|..++ +++. |++.+|+++.||+||+|+++.. +..+.-.+.+|..
T Consensus 201 -~~~~g~~~l~~~~~~---~~g-~i~~~~~V~~i~~~~-~~v~-v~~~~g~~~~ad~vi~a~~~~~-l~~i~~~p~l~~~ 272 (431)
T 3k7m_X 201 -VFSNGSADLVDAMSQ---EIP-EIRLQTVVTGIDQSG-DVVN-VTVKDGHAFQAHSVIVATPMNT-WRRIVFTPALPER 272 (431)
T ss_dssp -EETTCTHHHHHHHHT---TCS-CEESSCCEEEEECSS-SSEE-EEETTSCCEEEEEEEECSCGGG-GGGSEEESCCCHH
T ss_pred -hcCCcHHHHHHHHHh---hCC-ceEeCCEEEEEEEcC-CeEE-EEECCCCEEEeCEEEEecCcch-HhheeeCCCCCHH
Confidence 468888888877753 556 999999999999877 6655 8888998899999999999887 4566434568888
Q ss_pred HHHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEEEEeCCC
Q 048009 310 FILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIEMTIPSV 389 (531)
Q Consensus 310 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 389 (531)
..+.+....+ ....++++.++.+.. .++...+ +....++.+.+.
T Consensus 273 ~~~~~~~~~~-~~~~kv~~~~~~~~~-----------------~i~~~~d-----------------~~~~~~~~~~~~- 316 (431)
T 3k7m_X 273 RRSVIEEGHG-GQGLKILIHVRGAEA-----------------GIECVGD-----------------GIFPTLYDYCEV- 316 (431)
T ss_dssp HHHHHHHCCC-CCEEEEEEEEESCCT-----------------TEEEEBS-----------------SSSSEEEEEEEC-
T ss_pred HHHHHHhCCC-cceEEEEEEECCCCc-----------------CceEcCC-----------------CCEEEEEeCcCC-
Confidence 8888887776 566899988876421 1222111 011222222221
Q ss_pred CCCCCCCCCceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCceeEEEecCcchHHHHhCCCCCccc
Q 048009 390 LDKTISPPGNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFSSSIIGYDMLTPPDLEREIGLTGGNIF 469 (531)
Q Consensus 390 ~d~~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~~~~~~~~~~~G~~~ 469 (531)
+.+..++..+..... ++.. . + +.+.+.|++++|++. .+ .... ..|.... ...|++-
T Consensus 317 ------~~~~~~l~~~~~g~~-------~~~~-~-~---~~~~~~l~~~~~~~~-~~---~~~~-~~W~~d~-~~~G~~~ 372 (431)
T 3k7m_X 317 ------SESERLLVAFTDSGS-------FDPT-D-I---GAVKDAVLYYLPEVE-VL---GIDY-HDWIADP-LFEGPWV 372 (431)
T ss_dssp ------SSSEEEEEEEEETTT-------CCTT-C-H---HHHHHHHHHHCTTCE-EE---EEEC-CCTTTCT-TTSSSSC
T ss_pred ------CCCCeEEEEEecccc-------CCCC-C-H---HHHHHHHHHhcCCCC-cc---EeEe-cccCCCC-CCCCCCC
Confidence 124445544432111 1111 1 1 245677888898764 11 1111 2232211 1123321
Q ss_pred ccCCCccccccCCCCCCCCCCCCCCCCeeecCCCCCC--CCCcCCc--hHHHHHHHHHHH
Q 048009 470 HGAMGLDSLFLMRPVKGWSNYRTPLQGLYMCGSGTHP--GGGVMGA--PGRNAAGIVLQD 525 (531)
Q Consensus 470 ~~~~~~~~~~~~rp~~~~~~~~t~~~~ly~aG~~~~~--g~g~~~~--sg~~aa~~i~~~ 525 (531)
. ..+.+....++ ..+.|..+|||||+.|.. .+.+.|| ||++||++|+..
T Consensus 373 ~--~~~g~~~~~~~-----~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~~ 425 (431)
T 3k7m_X 373 A--PRVGQFSRVHK-----ELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILHS 425 (431)
T ss_dssp C--CCTTTTTTSSG-----GGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHC
T ss_pred C--cCCCCCcccHH-----HHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHhh
Confidence 1 11222212233 445678999999977743 3566788 999999999864
No 18
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.92 E-value=4.7e-24 Score=218.39 Aligned_cols=98 Identities=11% Similarity=0.092 Sum_probs=77.1
Q ss_pred cccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhh----------c
Q 048009 231 YVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMD----------L 300 (531)
Q Consensus 231 ~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~----------l 300 (531)
+++| ++.++++|++.+. +++|++|++|++|..++ +..+.|++.+|+++.||+||+|+++..+... +
T Consensus 197 ~~~g-~~~l~~~l~~~l~--~~~i~~~~~V~~I~~~~-~~~v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i 272 (516)
T 1rsg_A 197 FALN-YDSVVQRIAQSFP--QNWLKLSCEVKSITREP-SKNVTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRI 272 (516)
T ss_dssp EESC-HHHHHHHHHTTSC--GGGEETTCCEEEEEECT-TSCEEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCC
T ss_pred hhhC-HHHHHHHHHHhCC--CCEEEECCEEEEEEEcC-CCeEEEEECCCcEEECCEEEECCCHHHhhhccccccccccce
Confidence 6777 8999999977664 26799999999999864 3334589999988999999999988874211 1
Q ss_pred CCCCCCChHHHHHhhccCCCCCeEEEeeecCCC
Q 048009 301 VPGNILPDDFILSIKHSDYSSGTTKINLAVDKL 333 (531)
Q Consensus 301 l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 333 (531)
.-.+.+|+.+.+.++++.+ .++.++++.++++
T Consensus 273 ~f~P~Lp~~~~~ai~~~~~-~~~~Kv~l~f~~~ 304 (516)
T 1rsg_A 273 EFQPPLKPVIQDAFDKIHF-GALGKVIFEFEEC 304 (516)
T ss_dssp EEESCCCHHHHHHTTSSCC-CCCEEEEEEESSC
T ss_pred EecCCCCHHHHHHHHhCCC-CcceEEEEEeCCC
Confidence 1123489999999999988 6789999999875
No 19
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.92 E-value=4.3e-24 Score=207.15 Aligned_cols=229 Identities=14% Similarity=0.167 Sum_probs=145.1
Q ss_pred cccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCCC--CCCCh
Q 048009 231 YVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVPG--NILPD 308 (531)
Q Consensus 231 ~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~~--~~~~~ 308 (531)
...+|+..+.++|.+.+ |++|+++++|++|..++ +++. |++.+|+++.||.||+|+++..+ .+|++. +.+|+
T Consensus 106 ~~~~g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~~-~~~~-v~~~~g~~~~ad~vV~A~p~~~~-~~ll~~~~~~l~~ 179 (342)
T 3qj4_A 106 VAPQGISSIIKHYLKES---GAEVYFRHRVTQINLRD-DKWE-VSKQTGSPEQFDLIVLTMPVPEI-LQLQGDITTLISE 179 (342)
T ss_dssp ECTTCTTHHHHHHHHHH---TCEEESSCCEEEEEECS-SSEE-EEESSSCCEEESEEEECSCHHHH-TTCBSTHHHHSCH
T ss_pred ecCCCHHHHHHHHHHhc---CCEEEeCCEEEEEEEcC-CEEE-EEECCCCEEEcCEEEECCCHHHH-HHHhcccccccCH
Confidence 56788899999997755 89999999999999877 6654 88888887899999999988884 678764 24677
Q ss_pred HHHHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEEEEeCC
Q 048009 309 DFILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIEMTIPS 388 (531)
Q Consensus 309 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 388 (531)
.....+..++| .++.++++.++++... + ....|. .+. + ....-++++.+
T Consensus 180 ~~~~~l~~~~~-~~~~~v~l~~~~~~~~--------~--~~~~g~-~~~-~------------------~~~~~~~~~~~ 228 (342)
T 3qj4_A 180 CQRQQLEAVSY-SSRYALGLFYEAGTKI--------D--VPWAGQ-YIT-S------------------NPCIRFVSIDN 228 (342)
T ss_dssp HHHHHHHTCCB-CCEEEEEEECSSCC----------C--CSCSEE-ECS-S------------------CSSEEEEEEHH
T ss_pred HHHHHHhcCCc-cccEEEEEEECCCCcc--------C--CceeeE-Ecc-C------------------CcceEEEEccc
Confidence 78889999999 6899999999864111 0 112222 221 1 01233444444
Q ss_pred CCCCCCC-CCCceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCceeEEEecCcchHHHHhCCCCCc
Q 048009 389 VLDKTIS-PPGNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFSSSIIGYDMLTPPDLEREIGLTGGN 467 (531)
Q Consensus 389 ~~d~~~a-p~G~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~~~~~~~~~~~G~ 467 (531)
.+ |.+. |++..++++++. ..|.. .+.+ ..++++.+.+++.|+++++...+. ++..+ ..|. +..|+..
T Consensus 229 ~k-~~r~~~~~~~~~v~~~~-~~~~~---~~~~-~~~~~~~~~~~~~l~~~~g~~~~p-~~~~v---~rW~--~a~p~~~ 296 (342)
T 3qj4_A 229 KK-RNIESSEIGPSLVIHTT-VPFGV---TYLE-HSIEDVQELVFQQLENILPGLPQP-IATKC---QKWR--HSQVTNA 296 (342)
T ss_dssp HH-TTCCCC-CCCEEEEEEC-HHHHH---HTTT-SCHHHHHHHHHHHHHHHSCSCCCC-SEEEE---EEET--TCSBSSC
T ss_pred cC-CCCCCCCCCceEEEECC-HHHHH---Hhhc-CCHHHHHHHHHHHHHHhccCCCCC-ceeee---cccc--ccccccc
Confidence 44 3322 333345555543 12210 0111 124899999999999999844322 22211 1121 1223211
Q ss_pred ccccCCCccccccCCCCCCCCCCC--CCCCCeeecCCCCCCCCCcCCc--hHHHHHHHHHHH
Q 048009 468 IFHGAMGLDSLFLMRPVKGWSNYR--TPLQGLYMCGSGTHPGGGVMGA--PGRNAAGIVLQD 525 (531)
Q Consensus 468 ~~~~~~~~~~~~~~rp~~~~~~~~--t~~~~ly~aG~~~~~g~g~~~~--sg~~aa~~i~~~ 525 (531)
. . .+| ... ...++|++||||+. |+++++| ||+.||++|+..
T Consensus 297 ~---~--------~~~-----~~~~~~~~~~l~laGd~~~-g~~v~~ai~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 297 A---A--------NCP-----GQMTLHHKPFLACGGDGFT-QSNFDGCITSALCVLEALKNY 341 (342)
T ss_dssp C---S--------SSC-----SCEEEETTTEEEECSGGGS-CSSHHHHHHHHHHHHHHHTTC
T ss_pred c---C--------CCc-----ceeEecCCccEEEEccccC-CCCccHHHHHHHHHHHHHHhh
Confidence 1 0 122 112 34689999999996 6799988 999999999764
No 20
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.91 E-value=9.4e-24 Score=210.52 Aligned_cols=312 Identities=13% Similarity=0.117 Sum_probs=179.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeeccc-cc-------------------CCeeecccchhhh
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEE-LI-------------------PGFKFSRCSYLQS 75 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~-~~-------------------~g~~~d~g~~~~~ 75 (531)
.++||+|||||++||+||+.|+++|++|+|+|+++.+||++.+.. .. .+|.+|.|+.++.
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~l~ 84 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLM 84 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCBEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcceee
Confidence 358999999999999999999999999999999999999998875 11 3466666654422
Q ss_pred cchh--hhhhc-Ccccccchhhhc------------cchh-hhHHHH-H--HHHHHHHHHHHHHhhcCCCcccccCCCcc
Q 048009 76 LLRP--SLIKC-GTRIGETWNEVV------------EAKS-IIVYAI-F--EDQLDKFSQFVDLLFDSSPPELLQGSSSY 136 (531)
Q Consensus 76 ~~~~--~~~~~-gl~~~~~~~~~~------------~~~~-~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (531)
...+ .++.. |+...+.+.... .+.+ ...+.. . ......+...+..+....
T Consensus 85 ~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------- 153 (433)
T 1d5t_A 85 ANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFD----------- 153 (433)
T ss_dssp TTSHHHHHHHHHTGGGGCCEEECCEEEEEETTEEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHHCC-----------
T ss_pred ccchHHHHHHHcCCccceEEEEeCceEEeeCCEEEECCCCHHHHhhCcccChhhHHHHHHHHHHHHhhc-----------
Confidence 1111 12211 432111111110 0000 000000 0 000000011111000000
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHhcChhhHHHHHHHHhccHHHHhhcccCChhHHHHHhhh-hhhccCCCCCCCChH--HH
Q 048009 137 SHQFKNKIRNSAFWAHCLRRAISLGQKDLVEFVDLLLSPASKVLNKWFETDVLKATLATD-AVIGTMSSVHTPGSG--YV 213 (531)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~-~~~g~~~~~~~~~~~--~~ 213 (531)
..........+....++.+++.+++.++.++..+... .+.........+... ..
T Consensus 154 -----------------------~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~ 210 (433)
T 1d5t_A 154 -----------------------ENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINR 210 (433)
T ss_dssp -----------------------TTCGGGGTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHH
T ss_pred -----------------------ccCchhccccccccCCHHHHHHHcCCCHHHHHHHHHHHHhccCCCccCCCHHHHHHH
Confidence 0000000000124567888888888888888877532 111110111222221 22
Q ss_pred HHHHHhhccCCCCCccccccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCCh
Q 048009 214 LLHHVMGETDGNPGIWSYVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATP 293 (531)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~ 293 (531)
+..+.........+.+.+|+||++.++++|.+.+++.|++|+++++|++|..++ +++++|+. +|+++.||+||+|+++
T Consensus 211 ~~~~~~s~~~~g~~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~-~~v~~v~~-~g~~~~ad~VV~a~~~ 288 (433)
T 1d5t_A 211 IKLYSESLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMEN-GKVVGVKS-EGEVARCKQLICDPSY 288 (433)
T ss_dssp HHHHHHSCCSSSCCSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEET-TEEEEEEE-TTEEEECSEEEECGGG
T ss_pred HHHHHHHHHhcCCCcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeC-CEEEEEEE-CCeEEECCEEEECCCC
Confidence 222222111112334559999999999999999999999999999999999887 88877775 6778999999999988
Q ss_pred HhHHhhcCCCCCCChHHHHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHc
Q 048009 294 YKTFMDLVPGNILPDDFILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVN 373 (531)
Q Consensus 294 ~~~~~~ll~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (531)
+. ..+ . +++...+.+.+ ++++.+.. ..+.+ ++++++.
T Consensus 289 ~~--~~~-~-------------~~~~~~~~~~i---l~~~~~~~--------~~~~~-~~i~~~~--------------- 325 (433)
T 1d5t_A 289 VP--DRV-R-------------KAGQVIRIICI---LSHPIKNT--------NDANS-CQIIIPQ--------------- 325 (433)
T ss_dssp CG--GGE-E-------------EEEEEEEEEEE---ESSCCTTS--------TTCSS-EEEEECG---------------
T ss_pred Cc--ccc-c-------------ccCcceeEEEE---EcCccccc--------CCCce-EEEEeCc---------------
Confidence 86 222 1 11111233332 55543211 01122 3666631
Q ss_pred CCCCCCCeEEEEeCCCCCCCCCCCCceEEEEEec
Q 048009 374 GLPSRRPIIEMTIPSVLDKTISPPGNHVINLFIQ 407 (531)
Q Consensus 374 ~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~~~~ 407 (531)
+.++.++.++++++| .||+++|+|++++++++.
T Consensus 326 ~~~~~~~~~~v~~~s-~d~~~aP~G~~~~~~~~~ 358 (433)
T 1d5t_A 326 NQVNRKSDIYVCMIS-YAHNVAAQGKYIAIASTT 358 (433)
T ss_dssp GGTTCSSCEEEEEEE-GGGTSSCTTCEEEEEEEE
T ss_pred cccCCCCCEEEEEEC-CCCcccCCCCEEEEEEEe
Confidence 235677999999999 899999999999988754
No 21
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.91 E-value=8.2e-24 Score=213.75 Aligned_cols=235 Identities=16% Similarity=0.135 Sum_probs=147.1
Q ss_pred ccccc-cCchHHHHHHHHHHHHHcCcEEEcCc--ceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCCC-
Q 048009 228 IWSYV-EGGMGSVSMAIGSAAREAGAHIVTRA--EVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVPG- 303 (531)
Q Consensus 228 ~~~~~-~gG~~~l~~~l~~~~~~~G~~i~~~~--~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~~- 303 (531)
.+.|| .||+++|+++|++.+.+. +|++++ +|++|..++ ++ |++.+|+++.||+||+|++++.+ .+++..
T Consensus 206 ~f~yp~~gG~~~l~~~la~~l~~~--~i~~~~~~~V~~I~~~~-~~---v~~~~G~~~~ad~VI~a~p~~~~-~~ll~~~ 278 (484)
T 4dsg_A 206 TFRFPQRGGTGIIYQAIKEKLPSE--KLTFNSGFQAIAIDADA-KT---ITFSNGEVVSYDYLISTVPFDNL-LRMTKGT 278 (484)
T ss_dssp EEEEESSSCTHHHHHHHHHHSCGG--GEEECGGGCEEEEETTT-TE---EEETTSCEEECSEEEECSCHHHH-HHHEECS
T ss_pred eEEeecCCCHHHHHHHHHhhhhhC--eEEECCCceeEEEEecC-CE---EEECCCCEEECCEEEECCCHHHH-HHHhhcc
Confidence 34456 499999999999877543 789994 699999876 53 56788988999999999988885 667643
Q ss_pred -CCCChHHHHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeE
Q 048009 304 -NILPDDFILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPII 382 (531)
Q Consensus 304 -~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (531)
..+++...+.+..++| .++.+++++++....- ..+... .+++++. +.++.
T Consensus 279 ~~~~~~~~~~~l~~l~y-~s~~~v~l~~~~~~~~---------~~~~~~-~i~vp~~------------------~~~~~ 329 (484)
T 4dsg_A 279 GFKGYDEWPAIADKMVY-SSTNVIGIGVKGTPPP---------HLKTAC-WLYFPED------------------TSPFY 329 (484)
T ss_dssp SCTTGGGHHHHHHHCCE-EEEEEEEEEEESCCCG---------GGTTCC-EEECCST------------------TCSCS
T ss_pred CCCCCHHHHHHHhCCCc-CceEEEEEEEcCCCcc---------cCCCCe-EEEEEcC------------------CCeEE
Confidence 2367778888889988 6889999999875310 001121 4444221 12445
Q ss_pred EEEeCCCCCCCCCCCCceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCC--CceeEEEecCcchHHHH
Q 048009 383 EMTIPSVLDKTISPPGNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFS--SSIIGYDMLTPPDLERE 460 (531)
Q Consensus 383 ~~~~~s~~d~~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~--~~i~~~~~~tp~~~~~~ 460 (531)
-++++++++|.++|+|++++++........ ..++ +++.+.+++.|.++. .++ +.+....+ ..|...
T Consensus 330 ri~~~s~~~p~~ap~g~~~l~~e~~~~~~~----~~~d----~~l~~~a~~~L~~~~-~~~~~~~~~~~~v---~r~~~~ 397 (484)
T 4dsg_A 330 RATVFSNYSKYNVPEGHWSLMLEVSESKYK----PVNH----STLIEDCIVGCLASN-LLLPEDLLVSKWH---YRIEKG 397 (484)
T ss_dssp EEECGGGTCGGGSCTTEEEEEEEEEEBTTB----CCCT----TSHHHHHHHHHHHTT-SCCTTCCEEEEEE---EEEEEE
T ss_pred EEEeecCCCcccCCCCeEEEEEEEecCcCC----cCCH----HHHHHHHHHHHHHcC-CCCccceEEEEEE---EEeCcc
Confidence 688889999999999999888765322110 1222 778899999998873 333 22322111 111211
Q ss_pred hCCCCCcccccCCCccccccCCCCCCCCCCCCCCCCeeecCCCCC-CC--CCcCCc--hHHHHHHHHH
Q 048009 461 IGLTGGNIFHGAMGLDSLFLMRPVKGWSNYRTPLQGLYMCGSGTH-PG--GGVMGA--PGRNAAGIVL 523 (531)
Q Consensus 461 ~~~~~G~~~~~~~~~~~~~~~rp~~~~~~~~t~~~~ly~aG~~~~-~g--~g~~~~--sg~~aa~~i~ 523 (531)
+ |.....+ .......+. ..... |||++|.... .. .+++.+ +|..||+.|+
T Consensus 398 y--P~y~~~~----~~~~~~~~~------~l~~~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 398 Y--PTPFIGR----NNLLEKAQP------ELMSR-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp E--ECCBTTH----HHHHHHHHH------HHHHT-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred c--cCCCccH----HHHHHHHHH------HHHhC-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 1 1111000 000001111 11123 9999998552 22 345555 9999999998
No 22
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.89 E-value=1e-21 Score=205.85 Aligned_cols=249 Identities=16% Similarity=0.160 Sum_probs=142.0
Q ss_pred CccccccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCC------CcEEEcCeEEecCChHhHHhhc
Q 048009 227 GIWSYVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLAD------GAQVHSSIVLSNATPYKTFMDL 300 (531)
Q Consensus 227 ~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~------g~~~~ad~VV~aa~~~~~~~~l 300 (531)
+.+..++||++.|+++|.+ +.+|++|++|++|..++ +.+. |++.+ |+++.||+||+|+++.. +.++
T Consensus 391 g~~~~~~gG~~~l~~~La~-----~l~I~l~~~V~~I~~~~-~~v~-V~~~~~~~~~~~~~~~Ad~VI~tvP~~v-L~~l 462 (662)
T 2z3y_A 391 GSHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYTA-SGCE-VIAVNTRSTSQTFIYKCDAVLCTLPLGV-LKQQ 462 (662)
T ss_dssp SCCEEETTCTTHHHHHHTT-----TCEEETTEEEEEEEEET-TEEE-EEEEESSCTTCEEEEEESEEEECCCHHH-HHCS
T ss_pred CceeeecCcHHHHHHHHHh-----cCceecCCeEEEEEECC-CcEE-EEEeecccCCCCeEEEeCEEEECCCHHH-Hhcc
Confidence 3445789999999999865 56899999999999987 5543 77655 56799999999888777 4553
Q ss_pred C----CCCCCChHHHHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCC
Q 048009 301 V----PGNILPDDFILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLP 376 (531)
Q Consensus 301 l----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (531)
. -.+.+|+...+.++++.| .++.++++.++++. |. + .....-++....
T Consensus 463 ~~~i~f~P~LP~~k~~Ai~~l~~-g~~~KV~l~f~~~f-W~-------~---~~~~~G~l~~~~---------------- 514 (662)
T 2z3y_A 463 PPAVQFVPPLPEWKTSAVQRMGF-GNLNKVVLCFDRVF-WD-------P---SVNLFGHVGSTT---------------- 514 (662)
T ss_dssp SCSSEEESCCCHHHHHHHHHSEE-CCCEEEEEECSSCC-SC-------T---TCSEEEECCSSS----------------
T ss_pred cCceEEcCCCCHHHHHHHHhCCc-cceeEEEEEcCccc-cc-------C---CCCceeeecCCC----------------
Confidence 1 134589988889999988 68899999998742 21 1 011111111110
Q ss_pred CCCCeEEEEeCCCCCCCCCCCCceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCC-CceeEEEecCcc
Q 048009 377 SRRPIIEMTIPSVLDKTISPPGNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFS-SSIIGYDMLTPP 455 (531)
Q Consensus 377 ~~~~~~~~~~~s~~d~~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~-~~i~~~~~~tp~ 455 (531)
.....+++.+++. +..+|..++...... .|.. ...+++.+.+++.|+++++... .......+ .
T Consensus 515 ~~~~~~~~~~~~~--------~~~vL~~~~~G~~a~----~~~~-lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v---~ 578 (662)
T 2z3y_A 515 ASRGELFLFWNLY--------KAPILLALVAGEAAG----IMEN-ISDDVIVGRCLAILKGIFGSSAVPQPKETVV---S 578 (662)
T ss_dssp TTTTEEEEEECCS--------SSSEEEEEECTHHHH----HHTT-SCHHHHHHHHHHHHHHHHCTTSSCCCSEEEE---C
T ss_pred CCCCceeEEEeCC--------CCCEEEEEeccHhHH----HHHh-CCHHHHHHHHHHHHHHHhCCcccCCCceeEE---E
Confidence 1123344444432 223555554211111 1111 1237888999999999886421 11211111 1
Q ss_pred hHHHHhCCCCCcccccCCCc---cccccCCCCCC---CCCCCCCCCCeeecCCCCCC--CCCcCCc--hHHHHHHHHHHH
Q 048009 456 DLEREIGLTGGNIFHGAMGL---DSLFLMRPVKG---WSNYRTPLQGLYMCGSGTHP--GGGVMGA--PGRNAAGIVLQD 525 (531)
Q Consensus 456 ~~~~~~~~~~G~~~~~~~~~---~~~~~~rp~~~---~~~~~t~~~~ly~aG~~~~~--g~g~~~~--sg~~aa~~i~~~ 525 (531)
.|.+. ....|++-...... ......+|..+ ....+++.++|||||++|.. .+.++|| ||+.||++|++.
T Consensus 579 ~W~~d-p~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~ 657 (662)
T 2z3y_A 579 RWRAD-PWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQ 657 (662)
T ss_dssp CTTTC-TTTSSSCEECBTTCCTHHHHHHHCCBCC---------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred EECCC-CCCCcccccCCCCCchhhHHHHhCcCccccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 22221 11122211000100 00001122100 01235567899999999964 3566788 999999999998
Q ss_pred hhh
Q 048009 526 LKK 528 (531)
Q Consensus 526 ~~~ 528 (531)
+++
T Consensus 658 ~~g 660 (662)
T 2z3y_A 658 FLG 660 (662)
T ss_dssp HTC
T ss_pred ccC
Confidence 865
No 23
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.89 E-value=8e-22 Score=197.20 Aligned_cols=256 Identities=16% Similarity=0.196 Sum_probs=138.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcC-CcEEEEccCCCCCceeecccccCCeeecccchhhhcchhhhhhc----Cccccc
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAG-LSVAVLERRHVIGGAAVTEELIPGFKFSRCSYLQSLLRPSLIKC----GTRIGE 90 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G-~~V~v~E~~~~~GG~~~s~~~~~g~~~d~g~~~~~~~~~~~~~~----gl~~~~ 90 (531)
.++||+|||||++||+||++|+++| ++|+|+|+++++||++.+.. ..|+.+|.|++++....+.+.+. |++...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~-~~G~~~d~G~~~~~~~~~~~~~l~~~~g~~~~~ 83 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPN-YHGRRYEMGAIMGVPSYDTIQEIMDRTGDKVDG 83 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCE-ETTEECCSSCCCBCTTCHHHHHHHHHHCCCCCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccC-CCCcccccCceeecCCcHHHHHHHHHhCCcccc
Confidence 4689999999999999999999999 99999999999999999876 67999999987754333333222 442110
Q ss_pred ch--hhhcc-------c-hhhhHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcchhhhhhhhhhhhhHHHHHHHHHhc
Q 048009 91 TW--NEVVE-------A-KSIIVYAIFEDQLDKFSQFVDLLFDSSPPELLQGSSSYSHQFKNKIRNSAFWAHCLRRAISL 160 (531)
Q Consensus 91 ~~--~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (531)
.. ..+.. . .+.............+...+.......... ..+.. .
T Consensus 84 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~-~-------------------- 137 (424)
T 2b9w_A 84 PKLRREFLHEDGEIYVPEKDPVRGPQVMAAVQKLGQLLATKYQGYDAN-----GHYNK-V-------------------- 137 (424)
T ss_dssp CCCCEEEECTTSCEECGGGCTTHHHHHHHHHHHHHHHHHTTTTTTTSS-----SSSSC-C--------------------
T ss_pred ccccceeEcCCCCEeccccCcccchhHHHHHHHHHHHHhhhhhhcccc-----cchhh-h--------------------
Confidence 00 00000 0 000000001111111111111110000000 00000 0
Q ss_pred ChhhHHHHHHHHhccHHHHhhcccCChhHHHHHhhhhhhccCCCCCCCChHHHHHHHHhh---ccCCCCCccccccCchH
Q 048009 161 GQKDLVEFVDLLLSPASKVLNKWFETDVLKATLATDAVIGTMSSVHTPGSGYVLLHHVMG---ETDGNPGIWSYVEGGMG 237 (531)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~gG~~ 237 (531)
.+....++.+++.+..... +...+......+.+..+......+. +.+... ......+.| .+.||++
T Consensus 138 --------~~~~~~s~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~-~~~~~~~~~~~~~~~~~~-~~~~g~~ 206 (424)
T 2b9w_A 138 --------HEDLMLPFDEFLALNGCEA-ARDLWINPFTAFGYGHFDNVPAAYV-LKYLDFVTMMSFAKGDLW-TWADGTQ 206 (424)
T ss_dssp --------CGGGGSBHHHHHHHTTCGG-GHHHHTTTTCCCCCCCTTTSBHHHH-HHHSCHHHHHHHHHTCCB-CCTTCHH
T ss_pred --------hhhhccCHHHHHHhhCcHH-HHHHHHHHHHhhccCChHhcCHHHH-HHhhhHhhhhcccCCceE-EeCChHH
Confidence 0001244555555433332 2222211111111122222222221 111100 000112344 6889999
Q ss_pred HHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCCCCCCChHHHHHhhcc
Q 048009 238 SVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVPGNILPDDFILSIKHS 317 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~~~~~~~~~~~~i~~~ 317 (531)
++++++.+.+ +.+|+++++|++|..++ +++. |++.+|+ +.||+||+|+++..+ .++++. . +..++.+.++
T Consensus 207 ~l~~~l~~~l---~~~v~~~~~V~~i~~~~-~~v~-v~~~~g~-~~ad~Vv~a~~~~~~-~~~l~~--~-~~~~~~~~~~ 276 (424)
T 2b9w_A 207 AMFEHLNATL---EHPAERNVDITRITRED-GKVH-IHTTDWD-RESDVLVLTVPLEKF-LDYSDA--D-DDEREYFSKI 276 (424)
T ss_dssp HHHHHHHHHS---SSCCBCSCCEEEEECCT-TCEE-EEESSCE-EEESEEEECSCHHHH-TTSBCC--C-HHHHHHHTTC
T ss_pred HHHHHHHHhh---cceEEcCCEEEEEEEEC-CEEE-EEECCCe-EEcCEEEECCCHHHH-hhccCC--C-HHHHHHHhcC
Confidence 9999997655 56899999999999877 6665 8888886 899999999999885 566543 2 3334445666
Q ss_pred CC
Q 048009 318 DY 319 (531)
Q Consensus 318 ~~ 319 (531)
++
T Consensus 277 ~~ 278 (424)
T 2b9w_A 277 IH 278 (424)
T ss_dssp EE
T ss_pred Cc
Confidence 55
No 24
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.89 E-value=3.3e-21 Score=204.07 Aligned_cols=248 Identities=16% Similarity=0.174 Sum_probs=141.9
Q ss_pred CccccccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCC------CcEEEcCeEEecCChHhHHhhc
Q 048009 227 GIWSYVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLAD------GAQVHSSIVLSNATPYKTFMDL 300 (531)
Q Consensus 227 ~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~------g~~~~ad~VV~aa~~~~~~~~l 300 (531)
+.+..++||++.|+++|.+ +.+|++|++|++|..++ +.+. |++.+ |+++.||+||+|+++.. +.++
T Consensus 562 g~~~~~~gG~~~L~~aLa~-----~l~I~Lnt~V~~I~~~~-~gV~-V~~~~~~~~~~g~~i~AD~VIvTvPl~v-Lk~l 633 (852)
T 2xag_A 562 GSHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYTA-SGCE-VIAVNTRSTSQTFIYKCDAVLCTLPLGV-LKQQ 633 (852)
T ss_dssp SCCEEETTCTTHHHHHHTT-----TCCEECSEEEEEEEEET-TEEE-EEEEESSSTTCEEEEEESEEEECCCHHH-HHCS
T ss_pred CceEEecCcHHHHHHHHHh-----CCCEEeCCeEEEEEEcC-CcEE-EEEeecccCCCCeEEECCEEEECCCHHH-HHhh
Confidence 3445789999999999865 45799999999999987 5543 77654 56799999999888777 4553
Q ss_pred C----CCCCCChHHHHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCC
Q 048009 301 V----PGNILPDDFILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLP 376 (531)
Q Consensus 301 l----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (531)
+ -.+.+|+...+.|+.+.| .++.++++.|+++ || +. ...+.-++....
T Consensus 634 ~~~I~F~P~LP~~k~~AI~~l~~-g~v~KV~L~F~~~--fW-------~~--~~~~fG~l~~~~---------------- 685 (852)
T 2xag_A 634 PPAVQFVPPLPEWKTSAVQRMGF-GNLNKVVLCFDRV--FW-------DP--SVNLFGHVGSTT---------------- 685 (852)
T ss_dssp SCSSEEESCCCHHHHHHHHHSEE-CCCEEEEEECSSC--CS-------CT--TCCEEEECCSSS----------------
T ss_pred hcccccCCCCCHHHHHHHHcCCc-cceEEEEEEcCCc--cc-------CC--CCCeeeeecccc----------------
Confidence 2 134589888889999988 6889999999874 22 10 011111111110
Q ss_pred CCCCeEEEEeCCCCCCCCCCCCceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCC-----CceeEEEe
Q 048009 377 SRRPIIEMTIPSVLDKTISPPGNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFS-----SSIIGYDM 451 (531)
Q Consensus 377 ~~~~~~~~~~~s~~d~~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~-----~~i~~~~~ 451 (531)
.....+++.+++. +..+|..++...... .|.. ...+++.+.+++.|.++++... ..++..|.
T Consensus 686 ~~~~~l~~~~~~~--------~~pvLl~~v~G~~a~----~l~~-lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~ 752 (852)
T 2xag_A 686 ASRGELFLFWNLY--------KAPILLALVAGEAAG----IMEN-ISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWR 752 (852)
T ss_dssp TTTTTTCEEEECS--------SSSEEEEEECHHHHH----HGGG-SCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTT
T ss_pred CCCCceEEEecCC--------CCCEEEEEecCcCHH----HHhc-CCHHHHHHHHHHHHHHHhCccccCCceEEEEEecC
Confidence 0001112222221 122555554221111 1111 1247889999999999886422 22222222
Q ss_pred cCcchHHHHhCCCCCcccccCCCccccccCCCCCC---CCCCCCCCCCeeecCCCCCC--CCCcCCc--hHHHHHHHHHH
Q 048009 452 LTPPDLEREIGLTGGNIFHGAMGLDSLFLMRPVKG---WSNYRTPLQGLYMCGSGTHP--GGGVMGA--PGRNAAGIVLQ 524 (531)
Q Consensus 452 ~tp~~~~~~~~~~~G~~~~~~~~~~~~~~~rp~~~---~~~~~t~~~~ly~aG~~~~~--g~g~~~~--sg~~aa~~i~~ 524 (531)
..|.+...|...+-|.. ....+ ....|..+ ....+++.++|||||++|.. .+.++|| ||+.||+.|++
T Consensus 753 ~dp~s~GsYs~~~pG~~----~~~~~-~L~~P~~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~ 827 (852)
T 2xag_A 753 ADPWARGSYSYVAAGSS----GNDYD-LMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIAD 827 (852)
T ss_dssp TCTTTSSSCEECBTTCC----TTHHH-HTTSCBCCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCccccccCCCcc----hhhHH-HHhCccccccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHH
Confidence 22222111111111100 00000 01122100 01335677899999999964 3566787 99999999999
Q ss_pred Hhhh
Q 048009 525 DLKK 528 (531)
Q Consensus 525 ~~~~ 528 (531)
.+..
T Consensus 828 ~l~~ 831 (852)
T 2xag_A 828 QFLG 831 (852)
T ss_dssp HHHC
T ss_pred HhhC
Confidence 8754
No 25
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.88 E-value=3.3e-22 Score=210.59 Aligned_cols=240 Identities=14% Similarity=0.083 Sum_probs=137.0
Q ss_pred ccccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhh-cC-CCCCCC
Q 048009 230 SYVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMD-LV-PGNILP 307 (531)
Q Consensus 230 ~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~-ll-~~~~~~ 307 (531)
..+.+|++.+.+++++ |++|+++++|++|..++ +++. |++.+|+++.||+||+|+++..+ .+ .+ -.+.+|
T Consensus 527 ~~~~~G~~~l~~aLa~-----gl~I~l~t~V~~I~~~~-~~v~-V~~~~G~~i~Ad~VIvA~P~~vL-~~~~i~f~P~Lp 598 (776)
T 4gut_A 527 TLLTPGYSVIIEKLAE-----GLDIQLKSPVQCIDYSG-DEVQ-VTTTDGTGYSAQKVLVTVPLALL-QKGAIQFNPPLS 598 (776)
T ss_dssp EECTTCTHHHHHHHHT-----TSCEESSCCEEEEECSS-SSEE-EEETTCCEEEESEEEECCCHHHH-HTTCSEEESCCC
T ss_pred EEECChHHHHHHHHHh-----CCcEEcCCeeEEEEEcC-CEEE-EEECCCcEEEcCEEEECCCHHHH-hhcccccCCCCC
Confidence 4678999999888853 78999999999999887 6655 88899988999999998877763 43 21 234589
Q ss_pred hHHHHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEEEEeC
Q 048009 308 DDFILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIEMTIP 387 (531)
Q Consensus 308 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (531)
+.....+..+.+ .++.++++.++++ |+. +........-++.... .....+.+.+.
T Consensus 599 ~~~~~ai~~l~~-g~~~KV~l~f~~~--FW~------~~~~g~~~fG~l~~~~----------------~~~~~~~~~~d 653 (776)
T 4gut_A 599 EKKMKAINSLGA-GIIEKIALQFPYR--FWD------SKVQGADFFGHVPPSA----------------SKRGLFAVFYD 653 (776)
T ss_dssp HHHHHHHHHEEE-ECCEEEEEECSSC--TTH------HHHTTCSEEEECCSSG----------------GGTTEEEEEEE
T ss_pred HHHHHHHHhCCC-eeEEEEEEecCcc--ccc------ccCCCCceEEeecCCc----------------CCCceEEEEec
Confidence 888889998887 6789999999874 220 0000000011121110 01122223222
Q ss_pred CCCCCCCCCCC-ceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCC-CceeEEEecCcchHHHHhCCCC
Q 048009 388 SVLDKTISPPG-NHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFS-SSIIGYDMLTPPDLEREIGLTG 465 (531)
Q Consensus 388 s~~d~~~ap~G-~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~-~~i~~~~~~tp~~~~~~~~~~~ 465 (531)
. .|+| ..+|..++...... .|.. ...+++.+.+++.|.++++... .......+ .+|.+.. ...
T Consensus 654 ~------~p~g~~~vL~~~i~G~~a~----~l~~-lsdeel~~~~l~~L~~ifg~~~~~~P~~~~v---t~W~~dp-~s~ 718 (776)
T 4gut_A 654 M------DPQKKHSVLMSVIAGEAVA----SVRT-LDDKQVLQQCMATLRELFKEQEVPDPTKYFV---TRWSTDP-WIQ 718 (776)
T ss_dssp S------CTTSCSCEEEEEECTHHHH----HHHT-SCHHHHHHHHHHHHHHHTTTSCCCCCSEEEE---CCGGGCT-TTC
T ss_pred C------CCCCCceEEEEEecchhHH----HHHc-CCHHHHHHHHHHHHHHHhCcccccCcceEEE---ecCCCCC-ccC
Confidence 1 2444 34555554321110 1111 0237899999999999997421 11111111 1233221 112
Q ss_pred CcccccCCCccccccCCCCCCCCCCCCCC-CCeeecCCCCCC--CCCcCCc--hHHHHHHHHHH
Q 048009 466 GNIFHGAMGLDSLFLMRPVKGWSNYRTPL-QGLYMCGSGTHP--GGGVMGA--PGRNAAGIVLQ 524 (531)
Q Consensus 466 G~~~~~~~~~~~~~~~rp~~~~~~~~t~~-~~ly~aG~~~~~--g~g~~~~--sg~~aa~~i~~ 524 (531)
|++-.... .+.....+ ....|+ .+|||||++|++ .+.++|| ||..||++|+.
T Consensus 719 Gsys~~~~--g~~~~~~~-----~L~~p~~grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 719 MAYSFVKT--GGSGEAYD-----IIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp CSEEEEBT--TCCTHHHH-----HHHCCBTTTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred CCCCccCC--CCchhHHH-----HHhCcCCCcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 32210000 00000000 112233 789999999974 3456788 99999999974
No 26
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.84 E-value=4.2e-20 Score=190.16 Aligned_cols=101 Identities=8% Similarity=-0.058 Sum_probs=75.4
Q ss_pred ccccccCchHHHHHHHHHHHHHcCcEEEcCccee--EEEecCCCc-----eeEE-EeCCCc--EEEcCeEEecCChHhHH
Q 048009 228 IWSYVEGGMGSVSMAIGSAAREAGAHIVTRAEVS--QLMINDSGR-----VNGV-QLADGA--QVHSSIVLSNATPYKTF 297 (531)
Q Consensus 228 ~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~--~I~~~~~g~-----~~~V-~~~~g~--~~~ad~VV~aa~~~~~~ 297 (531)
.+..+.||+++|+++|++.+.+ |++|+++++|+ +|..++++. .+.| ...+|+ ++.||+||+|+++..+.
T Consensus 338 ~~~~i~GG~~~L~~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~ 416 (721)
T 3ayj_A 338 EYTLPVTENVEFIRNLFLKAQN-VGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLT 416 (721)
T ss_dssp EECCSSSSTHHHHHHHHHHHHH-HTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHH
T ss_pred ceeEECCcHHHHHHHHHHhccc-CCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHh
Confidence 3458899999999999998753 67789999999 999865341 1336 446777 78999999988776642
Q ss_pred h-----hcC----------------------CCCCC-C-------hHHHHHhhccCCCCCeEEEeeec
Q 048009 298 M-----DLV----------------------PGNIL-P-------DDFILSIKHSDYSSGTTKINLAV 330 (531)
Q Consensus 298 ~-----~ll----------------------~~~~~-~-------~~~~~~i~~~~~~~~~~~~~~~~ 330 (531)
. ++- .++.+ | ....++++++.| .+..|+++.+
T Consensus 417 ~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~-~~s~Kv~l~~ 483 (721)
T 3ayj_A 417 PIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHM-ARSSKVFATV 483 (721)
T ss_dssp HHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCE-ECEEEEEEEE
T ss_pred hccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCc-ccceEEEEEE
Confidence 1 121 12225 7 788899999988 6779999999
No 27
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.83 E-value=1.7e-18 Score=167.39 Aligned_cols=223 Identities=15% Similarity=0.137 Sum_probs=130.7
Q ss_pred cccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEE-cCeEEecCChHhHHhhcCCCCCCChH
Q 048009 231 YVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVH-SSIVLSNATPYKTFMDLVPGNILPDD 309 (531)
Q Consensus 231 ~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~-ad~VV~aa~~~~~~~~ll~~~~~~~~ 309 (531)
....|+..+.+.+.+ |++|+++++|++|..++ +.+. |++.+|+.+. ||.||+|+++..+ .++++. .+.
T Consensus 104 ~~~~~~~~l~~~l~~-----g~~i~~~~~v~~i~~~~-~~~~-v~~~~g~~~~~a~~vV~a~g~~~~-~~~~~~---~~~ 172 (336)
T 1yvv_A 104 VGKPGMSAITRAMRG-----DMPVSFSCRITEVFRGE-EHWN-LLDAEGQNHGPFSHVIIATPAPQA-STLLAA---APK 172 (336)
T ss_dssp EESSCTHHHHHHHHT-----TCCEECSCCEEEEEECS-SCEE-EEETTSCEEEEESEEEECSCHHHH-GGGGTT---CHH
T ss_pred EcCccHHHHHHHHHc-----cCcEEecCEEEEEEEeC-CEEE-EEeCCCcCccccCEEEEcCCHHHH-HHhhcc---CHH
Confidence 345667777777754 88999999999999887 5554 8888998664 9999999999885 556543 345
Q ss_pred HHHHhhccCCCCCeEEEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEEEEeCCC
Q 048009 310 FILSIKHSDYSSGTTKINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIEMTIPSV 389 (531)
Q Consensus 310 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 389 (531)
....+..+.| .++.++++.++.+... ... .++.. ..+.-++...+.
T Consensus 173 l~~~~~~~~~-~~~~~~~~~~~~~~~~------------~~~-~~~~~--------------------~~~~~~l~~~~~ 218 (336)
T 1yvv_A 173 LASVVAGVKM-DPTWAVALAFETPLQT------------PMQ-GCFVQ--------------------DSPLDWLARNRS 218 (336)
T ss_dssp HHHHHTTCCE-EEEEEEEEEESSCCSC------------CCC-EEEEC--------------------SSSEEEEEEGGG
T ss_pred HHHHHhhcCc-cceeEEEEEecCCCCC------------CCC-eEEeC--------------------CCceeEEEecCc
Confidence 5667788888 4888888888764211 111 22221 123334433332
Q ss_pred CCCCCCCCCceEEEEEeccccCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCCCceeEEEecCcchHHHHhCCCCCccc
Q 048009 390 LDKTISPPGNHVINLFIQYTPYKPSDGSWMDPAYRDSFANRCFSLIDEYAPGFSSSIIGYDMLTPPDLEREIGLTGGNIF 469 (531)
Q Consensus 390 ~d~~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~l~~~~P~~~~~i~~~~~~tp~~~~~~~~~~~G~~~ 469 (531)
. |...+.+. .+.++.. ..+.. .+.+ ...+++.+++++.+.++++.-........ ...|. +..+....
T Consensus 219 ~-p~~~~~~~-~~v~~~~-~~~~~---~~~~-~~~~~~~~~l~~~l~~~lg~~~~~p~~~~---~~rw~--~a~~~~~~- 285 (336)
T 1yvv_A 219 K-PERDDTLD-TWILHAT-SQWSR---QNLD-ASREQVIEHLHGAFAELIDCTMPAPVFSL---AHRWL--YARPAGAH- 285 (336)
T ss_dssp S-TTCCCSSE-EEEEEEC-HHHHH---HTTT-SCHHHHHHHHHHHHHTTCSSCCCCCSEEE---EEEEE--EEEESSCC-
T ss_pred C-CCCCCCCc-EEEEEeC-HHHHH---HHHh-CCHHHHHHHHHHHHHHHhCCCCCCCcEEE---ccccC--ccCCCCCC-
Confidence 2 33333322 3444332 11100 0111 02378888999999988753111111110 11111 00111100
Q ss_pred ccCCCccccccCCCCCCCCCCCCCCCCeeecCCCCCCCCCcCCc--hHHHHHHHHHHHhhh
Q 048009 470 HGAMGLDSLFLMRPVKGWSNYRTPLQGLYMCGSGTHPGGGVMGA--PGRNAAGIVLQDLKK 528 (531)
Q Consensus 470 ~~~~~~~~~~~~rp~~~~~~~~t~~~~ly~aG~~~~~g~g~~~~--sg~~aa~~i~~~~~~ 528 (531)
.+ .....+.++|+||||+++ |+|+.+| ||+.+|+.|.+.+++
T Consensus 286 ------------~~----~~~~~~~~rl~laGDa~~-g~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 286 ------------EW----GALSDADLGIYVCGDWCL-SGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp ------------CC----SCEEETTTTEEECCGGGT-TSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred ------------CC----CeeecCCCCEEEEecCCC-CCCHHHHHHHHHHHHHHHHHHhhh
Confidence 00 011123489999999997 5688887 999999999998765
No 28
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.78 E-value=1.2e-18 Score=172.33 Aligned_cols=251 Identities=13% Similarity=0.158 Sum_probs=137.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeeccccc-------------------CCeeecccchhhhc
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELI-------------------PGFKFSRCSYLQSL 76 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~-------------------~g~~~d~g~~~~~~ 76 (531)
.++||+|||+|++|+++|+.|+++|++|+|+|+++.+||++.+.... .+|.+|.++.++..
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l~~ 98 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFILV 98 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBEET
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEeec
Confidence 46999999999999999999999999999999999999999876511 14677777654322
Q ss_pred chhhhhh----cCcccccchhhhc----cc-h-------hhhHHHHHHHHHHHHHHHHHHhhcCCCcccccCCCcchhhh
Q 048009 77 LRPSLIK----CGTRIGETWNEVV----EA-K-------SIIVYAIFEDQLDKFSQFVDLLFDSSPPELLQGSSSYSHQF 140 (531)
Q Consensus 77 ~~~~~~~----~gl~~~~~~~~~~----~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (531)
...+++ .++...+.+..+. .. . +...+. +.......+... ...+.++.
T Consensus 99 -~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~--------VPss~~e~~~~~-------lLs~~eK~ 162 (475)
T 3p1w_A 99 -GGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHK--------VPATDMEALVSP-------LLSLMEKN 162 (475)
T ss_dssp -TSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEE--------CCCSHHHHHTCT-------TSCHHHHH
T ss_pred -CcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEe--------CCCCHHHHhhcc-------CCCHHHHH
Confidence 212221 1433222222211 00 0 000000 000000000000 00011111
Q ss_pred hhhhhhhhhHHHHHHHHHhcChhhHHHH--HHHHhccHHHHhhcccCChhHHHHHhh-hhhhccCCCCCCCChH--HHHH
Q 048009 141 KNKIRNSAFWAHCLRRAISLGQKDLVEF--VDLLLSPASKVLNKWFETDVLKATLAT-DAVIGTMSSVHTPGSG--YVLL 215 (531)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~~g~~~~~~~~~~~--~~~~ 215 (531)
. +.+.+.............+ .+....++.+|+.++-.++.++..+.. .++... ..+...... +..+
T Consensus 163 ~--------l~kFL~~l~~~~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~-~~~~~~~a~~~l~ri 233 (475)
T 3p1w_A 163 R--------CKNFYQYVSEWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLN-DDYLKQPAYLTLERI 233 (475)
T ss_dssp H--------HHHHHHHHHHCCTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSS-SGGGGSBHHHHHHHH
T ss_pred H--------HHHHHHHHHhhhhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcC-CCcccCCHHHHHHHH
Confidence 0 0111111100000000000 011245677777776666666665421 111110 011111121 1111
Q ss_pred H-HH--hhccCCCCCccccccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEe-cCCCceeEEEeCCCcEEEcCeEEecC
Q 048009 216 H-HV--MGETDGNPGIWSYVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMI-NDSGRVNGVQLADGAQVHSSIVLSNA 291 (531)
Q Consensus 216 ~-~~--~~~~~~~~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~-~~~g~~~~V~~~~g~~~~ad~VV~aa 291 (531)
. +. +... + ...+.||+||++.|+++|.+.++++|++|+++++|++|.. ++ |++++|++.+|+++.||+||+|+
T Consensus 234 ~~y~~Sl~~y-g-~s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~-g~v~gV~~~~G~~i~Ad~VI~a~ 310 (475)
T 3p1w_A 234 KLYMQSISAF-G-KSPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDD-NKVCGIKSSDGEIAYCDKVICDP 310 (475)
T ss_dssp HHHHHHHHHH-S-SCSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTT-SCEEEEEETTSCEEEEEEEEECG
T ss_pred HHHHHHHhhc-C-CCceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecC-CeEEEEEECCCcEEECCEEEECC
Confidence 1 11 1211 2 3345599999999999999999999999999999999999 55 88999999999889999999998
Q ss_pred ChH
Q 048009 292 TPY 294 (531)
Q Consensus 292 ~~~ 294 (531)
+.+
T Consensus 311 ~~~ 313 (475)
T 3p1w_A 311 SYV 313 (475)
T ss_dssp GGC
T ss_pred Ccc
Confidence 865
No 29
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.78 E-value=3.6e-17 Score=166.21 Aligned_cols=194 Identities=13% Similarity=0.043 Sum_probs=126.6
Q ss_pred HHHHhccHHHHhhcccCChhHHHHHhhhhhhccCCCCCCCChHHHH---HHHHhhccCCCCCccccccCchHHHHHHHHH
Q 048009 169 VDLLLSPASKVLNKWFETDVLKATLATDAVIGTMSSVHTPGSGYVL---LHHVMGETDGNPGIWSYVEGGMGSVSMAIGS 245 (531)
Q Consensus 169 ~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~ 245 (531)
..+...++.+++++++.++.++..+.... +. ...........+ ..++........+.|.|++||++.|+++|.+
T Consensus 310 ~~~d~~S~~d~L~~~~ls~~L~~~L~~~l--al-~~~~~~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~g~L~qaL~r 386 (650)
T 1vg0_A 310 RAYEGTTFSEYLKTQKLTPNLQYFVLHSI--AM-TSETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQGELPQCFCR 386 (650)
T ss_dssp HTTTTSBHHHHHTTSSSCHHHHHHHHHHT--TC---CCSCBHHHHHHHHHHHHHHTTSSSSSSEEEETTCTTHHHHHHHH
T ss_pred hhhccCCHHHHHHHhCCCHHHHHHHHHHH--hc-cCCCCCchhHHHHHHHHHHHHHHhhccCceEEeCCchhHHHHHHHH
Confidence 34567899999999999999988876321 11 111111122221 1222111112224566999999999999999
Q ss_pred HHHHcCcEEEcCcceeEEEecCC-CceeEEEeCCCcEEEcCeEEecCChHhHHhhcCCCCCCChHHHHHhhccCCCCCeE
Q 048009 246 AAREAGAHIVTRAEVSQLMINDS-GRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVPGNILPDDFILSIKHSDYSSGTT 324 (531)
Q Consensus 246 ~~~~~G~~i~~~~~V~~I~~~~~-g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~~~~~~~~~~~~i~~~~~~~~~~ 324 (531)
.++..|++|+++++|++|..+++ |++++|++.+|+++.||+||++. .. ++.. + . ....+ ..+.
T Consensus 387 ~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~--~~-----lp~~-~----~---~~~~~-~~v~ 450 (650)
T 1vg0_A 387 MCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED--SY-----LSEN-T----C---SRVQY-RQIS 450 (650)
T ss_dssp HHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG--GG-----BCTT-T----T---TTCCC-EEEE
T ss_pred HHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh--hh-----cCHh-H----h---ccccc-cceE
Confidence 99999999999999999998764 78899998889999999999943 22 1221 1 1 11123 3567
Q ss_pred EEeeecCCCCccccccCCCCCCCCCcceEEEECCCCHHHHHHHHHHHHcCCCCCCCeEEEEeCCCCCCCCCCCCceEEEE
Q 048009 325 KINLAVDKLPQFQCCKLSHPDPGPQHVGTIHIGSESMEEIHSACQEAVNGLPSRRPIIEMTIPSVLDKTISPPGNHVINL 404 (531)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~d~~~ap~G~~~l~~ 404 (531)
.+.+.+++++.- .....+.+.+.++... | .++.+++..+|. ++..+|+|++++++
T Consensus 451 R~i~i~~~pi~~--------~~~~~~~~~iiiP~~~-------------g---~~~~V~i~~~Ss-~~~~cP~G~~Vv~l 505 (650)
T 1vg0_A 451 RAVLITDGSVLR--------TDADQQVSILTVPAEE-------------P---GSFAVRVIELCS-STMTCMKGTYLVHL 505 (650)
T ss_dssp EEEEEESSCSSC--------CSCCCCCEEEEECCSS-------------T---TSCCEEEEEECG-GGTSSCTTCEEEEE
T ss_pred EEEEEecCCCCC--------cCCCcceEEEEccCcc-------------C---CCCCEEEEEeCC-CCCCCCCCCEEEEE
Confidence 777778875431 1101123445553321 1 357788988888 88999999999887
Q ss_pred Ee
Q 048009 405 FI 406 (531)
Q Consensus 405 ~~ 406 (531)
.+
T Consensus 506 st 507 (650)
T 1vg0_A 506 TC 507 (650)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 30
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.75 E-value=1.5e-18 Score=171.03 Aligned_cols=69 Identities=32% Similarity=0.396 Sum_probs=58.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHc-CCcEEEEccCCCCCceeeccccc-CCeee-cccchhhhcchhhhhhc
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARA-GLSVAVLERRHVIGGAAVTEELI-PGFKF-SRCSYLQSLLRPSLIKC 84 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~-G~~V~v~E~~~~~GG~~~s~~~~-~g~~~-d~g~~~~~~~~~~~~~~ 84 (531)
.++||+|||||++||+||++|+++ |++|+|+|+++++||++.+.... .|+.+ +.|++++....+.+++.
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~ 77 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDY 77 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcCCcHHHHHH
Confidence 369999999999999999999999 99999999999999999987622 68887 58988766555655544
No 31
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.73 E-value=8.2e-17 Score=156.58 Aligned_cols=66 Identities=26% Similarity=0.380 Sum_probs=56.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccccCCeeec-ccchhhhcchhhhhh
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFS-RCSYLQSLLRPSLIK 83 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~~g~~~d-~g~~~~~~~~~~~~~ 83 (531)
++||+|||||++||+||++|+++|++|+|+|+++++||++.+.. ..|+.++ .|++++....+.+++
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~-~~g~~~~~~G~~~~~~~~~~~~~ 67 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTED-CEGIQIHKYGAHIFHTNDKYIWD 67 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEE-ETTEEEETTSCCCEEESCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeec-cCCceeeccCCceecCCCHHHHH
Confidence 37999999999999999999999999999999999999998876 5788885 898876554454443
No 32
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.70 E-value=1.8e-16 Score=155.14 Aligned_cols=69 Identities=19% Similarity=0.261 Sum_probs=58.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccc-cCCeee-cccchhhhcchhhhhhc
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEEL-IPGFKF-SRCSYLQSLLRPSLIKC 84 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~-~~g~~~-d~g~~~~~~~~~~~~~~ 84 (531)
.++||+|||||++||++|+.|+++|++|+|+|+++++||++.+... ..|+.+ |.|++++....+.+++.
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~~~~~~~~~ 72 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHTDNETVWNY 72 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEESCHHHHHH
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECCCCHHHHHH
Confidence 3589999999999999999999999999999999999999988652 168876 89998876656655543
No 33
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.59 E-value=1.3e-14 Score=145.43 Aligned_cols=64 Identities=20% Similarity=0.241 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCc---ceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCC
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRA---EVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~---~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
...+...|.+.++++|++|++++ +|++|..++ +++++|++.+|+++.||.||+|+|.+. ..|++
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~-~~v~gV~t~~G~~i~Ad~VV~AtG~~s--~~l~~ 226 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN-NDVKGAVTADGKIWRAERTFLCAGASA--GQFLD 226 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET-TEEEEEEETTTEEEECSEEEECCGGGG--GGTSC
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC-CeEEEEEECCCCEEECCEEEECCCCCh--hhhcC
Confidence 45789999999999999999999 999999887 888889999997899999999999997 56654
No 34
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.58 E-value=7.6e-15 Score=141.18 Aligned_cols=66 Identities=27% Similarity=0.342 Sum_probs=55.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccC-CCCCceeecccc---------cCCeeecccchhhhcchhhh
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERR-HVIGGAAVTEEL---------IPGFKFSRCSYLQSLLRPSL 81 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~-~~~GG~~~s~~~---------~~g~~~d~g~~~~~~~~~~~ 81 (531)
..+||+|||||++||+||+.|+++|++|+|||++ +++||++.+... ..++.++.|++++....+.+
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~~~~~~ 118 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPSFHPLT 118 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEETTCHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecchHHHH
Confidence 4689999999999999999999999999999999 999999988652 36788999987654444433
No 35
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.56 E-value=2.9e-14 Score=139.52 Aligned_cols=59 Identities=10% Similarity=0.111 Sum_probs=51.3
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCc--EEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGA--QVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~--~~~ad~VV~aa~~~~ 295 (531)
...+.+.|.+.++++|++|+++++|++|..++ ++.+.|++.+|+ ++.||.||+|+|++.
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRP-EGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECT-TSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcC-CceEEEEECCCceeEEEeCEEEECCCcch
Confidence 35789999999999999999999999999887 553458888883 799999999999987
No 36
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.55 E-value=1e-14 Score=141.44 Aligned_cols=70 Identities=26% Similarity=0.321 Sum_probs=58.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccccCCee-ecccchhhhcchhhhhhc
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFK-FSRCSYLQSLLRPSLIKC 84 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~~g~~-~d~g~~~~~~~~~~~~~~ 84 (531)
...+||+|||||++||+||+.|+++|++|+|+|+++++||++.+.....|+. ++.|++++....+.+++.
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~~~~~~~~~ 97 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHTNSKDVFEY 97 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEESCHHHHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCCChHHHHHH
Confidence 4579999999999999999999999999999999999999998765467886 499998866555554443
No 37
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.51 E-value=2.4e-13 Score=143.41 Aligned_cols=62 Identities=13% Similarity=0.119 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCc-EEEcCeEEecCChHhHHhhcCC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGA-QVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~-~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
..+..+|.+.+++.|++|+++++|++|..++ +++ .|++.+|+ ++.||.||+|+|.+. ..+..
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-~~v-~V~t~~G~~~i~Ad~VVlAtG~~s--~~l~~ 474 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRID-SQW-QLTFGQSQAAKHHATVILATGHRL--PEWEQ 474 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECS-SSE-EEEEC-CCCCEEESEEEECCGGGT--TCSTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC-CeE-EEEeCCCcEEEECCEEEECCCcch--hcccc
Confidence 6899999999999999999999999999987 664 58888886 799999999999986 45543
No 38
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.49 E-value=4.8e-13 Score=141.03 Aligned_cols=62 Identities=13% Similarity=0.116 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
..+...|.+.+++.|++|+++++|++|..++ +++ .|++.+|.++.||.||+|+|.+. ..+..
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~-~~v-~V~t~~G~~i~Ad~VVlAtG~~s--~~l~~ 478 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKD-DCW-LLNFAGDQQATHSVVVLANGHQI--SRFSQ 478 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TEE-EEEETTSCEEEESEEEECCGGGG--GCSTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC-CeE-EEEECCCCEEECCEEEECCCcch--hcccc
Confidence 5789999999999999999999999999887 664 68888888899999999999987 45543
No 39
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.48 E-value=1.2e-13 Score=135.70 Aligned_cols=56 Identities=13% Similarity=0.202 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
..+...|.+.++++|++|+++++|++|..++ ++ ++|++.+| ++.||+||+|+|++.
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~-~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVD-GA-WEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEET-TE-EEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC-Ce-EEEEeCCC-EEEcCEEEECCChhH
Confidence 5789999999999999999999999999877 65 56888888 699999999999987
No 40
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.43 E-value=4.6e-12 Score=125.52 Aligned_cols=57 Identities=25% Similarity=0.399 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
..+.+.|.+.+++.|++|+++++|++|..++ +++++|++.+| ++.||.||+|+|.+.
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQNCEVTGFIKDG-EKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEeC-CEEEEEEeCCc-eEECCEEEECCchhH
Confidence 3788999999999999999999999999887 77788999888 599999999999886
No 41
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.43 E-value=1.4e-12 Score=128.76 Aligned_cols=64 Identities=16% Similarity=0.306 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeC-CCc--EEEcCeEEecCChHhHHhhcC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLA-DGA--QVHSSIVLSNATPYKTFMDLV 301 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~-~g~--~~~ad~VV~aa~~~~~~~~ll 301 (531)
..+-..|.+.+++.|++++++++|+.+..++ +++.++... +++ +++||.||-|.|..+.+.+.+
T Consensus 102 ~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~-~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~ 168 (397)
T 3oz2_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHHhcCcEEeeeeeeeeeeecc-ceeeeeeecccccceEEEEeEEEeCCccccHHHHHc
Confidence 3677778888899999999999999999887 777766553 332 689999999999887665554
No 42
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.42 E-value=1.6e-12 Score=127.69 Aligned_cols=56 Identities=20% Similarity=0.180 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
..+.+.|.+.+++.|++|+++++|++|..++ +++ +|++.+| ++.||.||+|+|.+.
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~-~v~~~~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDG-EAL-FIKTPSG-DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSS-SSE-EEEETTE-EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC-CEE-EEEcCCc-eEEcCEEEECCChhH
Confidence 5789999999999999999999999999877 666 6888888 699999999999876
No 43
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.42 E-value=1.4e-12 Score=128.33 Aligned_cols=62 Identities=10% Similarity=0.174 Sum_probs=52.7
Q ss_pred cccCchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 231 YVEGGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 231 ~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
++......+.+.|.+.+++.|++|+++++|++|..++ +. +.|++.+| ++.||.||+|+|.+.
T Consensus 126 ~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~-~~-~~V~~~~g-~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 126 FCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTA-SG-FRVTTSAG-TVDAASLVVASGGKS 187 (417)
T ss_dssp EESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEET-TE-EEEEETTE-EEEESEEEECCCCSS
T ss_pred eeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC-CE-EEEEECCc-EEEeeEEEECCCCcc
Confidence 4445556899999999999999999999999999876 54 45888888 699999999999876
No 44
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.41 E-value=2.6e-12 Score=126.15 Aligned_cols=57 Identities=23% Similarity=0.447 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
..+...|.+.+++.|++|+++++|++|..++ +++.+|++.+| ++.||.||+|+|.+.
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIEN-NEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEEC-CEEEEEEECCc-EEECCEEEECcchhH
Confidence 5788999999999999999999999999887 78877888888 699999999999986
No 45
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.40 E-value=8.5e-13 Score=135.40 Aligned_cols=58 Identities=22% Similarity=0.364 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCC---C--cEEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLAD---G--AQVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~---g--~~~~ad~VV~aa~~~~ 295 (531)
..+..+|.+.++++|++|+++++|++|..++ +++++|++.| | .++.||.||+|+|+|.
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~-g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQ-GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEET-TEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 5789999999999999999999999999987 8888888864 3 3689999999999997
No 46
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.36 E-value=2.2e-13 Score=137.93 Aligned_cols=58 Identities=19% Similarity=0.198 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+++.|++|+++++|++|..++ +++ .|++.+|+++.+|.||+|+|...
T Consensus 231 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vi~A~G~~p 288 (484)
T 3o0h_A 231 DYDLRQLLNDAMVAKGISIIYEATVSQVQSTE-NCY-NVVLTNGQTICADRVMLATGRVP 288 (484)
T ss_dssp CHHHHHHHHHHHHHHTCEEESSCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC-CEE-EEEECCCcEEEcCEEEEeeCCCc
Confidence 45788889999999999999999999999876 555 58899998899999999998654
No 47
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.34 E-value=3.1e-12 Score=125.19 Aligned_cols=61 Identities=23% Similarity=0.284 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
..+.+.|.+.+++.|++|+.+++|++|..++ +++ .|++.+|+ +.||.||+|+|++. ..|++
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~-~~~-~v~~~~g~-~~a~~vV~a~G~~s--~~l~~ 209 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHDD-DGV-TIETADGE-YQAKKAIVCAGTWV--KDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECS-SSE-EEEESSCE-EEEEEEEECCGGGG--GGTST
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEcC-CEE-EEEECCCe-EEcCEEEEcCCccH--Hhhcc
Confidence 4788999999999999999999999999876 554 48888885 99999999999987 56665
No 48
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.34 E-value=1.1e-11 Score=123.95 Aligned_cols=59 Identities=20% Similarity=0.252 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
...+.+.|.+.+++.|++|+++++|++|..++ +++++|++.+|+++.||.||+|+|.+.
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~-~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYEN-GQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-CcEEEEEECCCCEEECCEEEECCCCCc
Confidence 45788999999999999999999999999876 777889999998899999999999876
No 49
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.34 E-value=1.4e-11 Score=123.65 Aligned_cols=57 Identities=18% Similarity=0.194 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEe---------------cCCCceeEEEeCCCcEE--EcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMI---------------NDSGRVNGVQLADGAQV--HSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~---------------~~~g~~~~V~~~~g~~~--~ad~VV~aa~~~~ 295 (531)
..+...|.+.++++|++|+++++|++|.. ++ +++++|++.+|+ + .||.||+|+|++.
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~-~~v~~V~t~~g~-i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE-ARASAAVLSDGT-RVEVGEKLVVAAGVWS 254 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC-EEEEEEEETTSC-EEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC-CceEEEEeCCCE-EeecCCEEEECCCcCH
Confidence 47899999999999999999999999998 55 677788888884 8 9999999999987
No 50
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.33 E-value=3.4e-11 Score=122.55 Aligned_cols=62 Identities=23% Similarity=0.322 Sum_probs=51.8
Q ss_pred CchHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCC-Cc--EEEcC-eEEecCChHh
Q 048009 234 GGMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLAD-GA--QVHSS-IVLSNATPYK 295 (531)
Q Consensus 234 gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~-g~--~~~ad-~VV~aa~~~~ 295 (531)
+|...+...|.+.++++|++|+++++|++|..+++|++++|++.+ |+ ++.|| .||+|+|.+.
T Consensus 199 ~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 199 GGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp CTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred CCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 344489999999999999999999999999998338999988864 32 58996 9999999876
No 51
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.33 E-value=9.7e-12 Score=122.44 Aligned_cols=60 Identities=18% Similarity=0.295 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLV 301 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll 301 (531)
..+...|.+.++++|++|+++++|++|..++ +++ .|++.+| ++.||.||+|+|.+. ..++
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~~-~v~~~~g-~~~a~~vV~A~G~~~--~~l~ 209 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISP-DSV-KIETANG-SYTADKLIVSMGAWN--SKLL 209 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECS-SCE-EEEETTE-EEEEEEEEECCGGGH--HHHG
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecC-CeE-EEEeCCC-EEEeCEEEEecCccH--HHHh
Confidence 5788999999999999999999999999876 554 4777777 599999999999986 4444
No 52
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.31 E-value=1.2e-11 Score=127.51 Aligned_cols=61 Identities=20% Similarity=0.248 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeC--CCc--EEEcCeEEecCChHhH
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLA--DGA--QVHSSIVLSNATPYKT 296 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~--~g~--~~~ad~VV~aa~~~~~ 296 (531)
...+.+.|.+.+++.|++|+++++|++|..++++++++|++. +|+ ++.||.||+|+|.+..
T Consensus 249 ~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 249 GPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 357889999999999999999999999987653788888775 675 6899999999998763
No 53
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.30 E-value=2.8e-11 Score=122.41 Aligned_cols=58 Identities=22% Similarity=0.351 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
..+.+.|.+.+++.|++|+++++|++|..++ +++++|++.+|+++.||.||+|+|.+.
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~-~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMED-GQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESS-SBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC-CEEEEEEECCCCEEECCEEEECCCCCh
Confidence 4788889999999999999999999999887 888889999999999999999999876
No 54
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.30 E-value=1.3e-12 Score=131.42 Aligned_cols=58 Identities=10% Similarity=0.133 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEE-eCCCcEEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQ-LADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~-~~~g~~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+++.|++|+++++|++|..++ ++...|+ +.+|+ +.+|.||+|+|...
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADA-DGRRVATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECT-TSCEEEEESSSCE-EEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcC-CCEEEEEEcCCCe-EEeCEEEEeeCccc
Confidence 45788999999999999999999999999876 4434588 88998 99999999998654
No 55
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.29 E-value=4.4e-11 Score=123.47 Aligned_cols=59 Identities=14% Similarity=0.197 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeC--CCc--EEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLA--DGA--QVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~--~g~--~~~ad~VV~aa~~~~ 295 (531)
..+...|.+.+++.|++|+++++|++|..+++|++++|++. +|+ ++.||.||+|+|.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 57889999999999999999999999998654788888775 675 689999999999865
No 56
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.29 E-value=1.7e-11 Score=120.40 Aligned_cols=57 Identities=21% Similarity=0.187 Sum_probs=48.6
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEec----CCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMIN----DSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~----~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
...+.+.|.+.+++.|++|+++++|++|..+ + +++ .|++.+| ++.||.||+|+|.+.
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~-~~~-~v~~~~g-~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK-VRF-VLQVNST-QWQCKNLIVATGGLS 168 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS-CCE-EEEETTE-EEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC-CeE-EEEECCC-EEECCEEEECCCCcc
Confidence 4578889999999999999999999999976 4 554 5878777 699999999999876
No 57
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.28 E-value=1.2e-11 Score=122.12 Aligned_cols=56 Identities=23% Similarity=0.310 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
..+...|.+.+++.|++|+++++|++|..++ +.+. |++.+| ++.||.||+|+|.+.
T Consensus 153 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~-~~v~-v~t~~g-~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 153 RGTLAALFTLAQAAGATLRAGETVTELVPDA-DGVS-VTTDRG-TYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEET-TEEE-EEESSC-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEcC-CeEE-EEECCC-EEEcCEEEEcCCcCh
Confidence 4688889999999999999999999999876 6554 777666 699999999999985
No 58
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.28 E-value=3.7e-11 Score=129.60 Aligned_cols=57 Identities=28% Similarity=0.339 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
..+...|.+.++++|++|+++++|++|..++ +++++|++.+| ++.||.||+|+|.+.
T Consensus 151 ~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~-~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 151 ARAVQLLIKRTESAGVTYRGSTTVTGIEQSG-GRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEECCceEEEEEEeC-CEEEEEEECCc-EEECCEEEECCccch
Confidence 4789999999999999999999999999877 77778888888 599999999999987
No 59
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.28 E-value=2e-11 Score=125.46 Aligned_cols=58 Identities=16% Similarity=0.352 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeC---CCc--EEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLA---DGA--QVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~---~g~--~~~ad~VV~aa~~~~ 295 (531)
..++..+.+.++++|++|+.+++|++|..++ +++++|++. +|+ ++.||.||+|+|+|.
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~-~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG-DQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEeC-CEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 4688888888999999999999999999887 788888864 343 689999999999997
No 60
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.27 E-value=1.4e-13 Score=139.53 Aligned_cols=256 Identities=14% Similarity=0.112 Sum_probs=128.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccC--------CCCCceeecccccCCeeecccchhhhcchhhhhhcCccc
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERR--------HVIGGAAVTEELIPGFKFSRCSYLQSLLRPSLIKCGTRI 88 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~--------~~~GG~~~s~~~~~g~~~d~g~~~~~~~~~~~~~~gl~~ 88 (531)
+|||+|||||.+|++||.++++.|.+|+|+|+. ..+||.|-..+|+|.-.+-..+..........-..|+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 489999999999999999999999999999974 358999988776654222111111111000000012210
Q ss_pred ccchhhhccchhhhHH-HHHHHHHHHHHHHHHHhhcCCCcccccCCCcchhhhhhhhh-------hhhhHHHHHHHHHhc
Q 048009 89 GETWNEVVEAKSIIVY-AIFEDQLDKFSQFVDLLFDSSPPELLQGSSSYSHQFKNKIR-------NSAFWAHCLRRAISL 160 (531)
Q Consensus 89 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 160 (531)
.. ...++... .+.......+.......+.....+...+...|.+....... ...+..+.+..+.+.
T Consensus 122 ----~~--~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~~~v~V~~~~~~~~~~~i~a~~iiIATGs 195 (542)
T 4b1b_A 122 ----DN--LKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLKGDLSKEETVTGKYILIATGC 195 (542)
T ss_dssp ----EE--EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEETTEEEEEEC--CCCEEEEEEEEEEECCCE
T ss_pred ----Cc--ccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCCCcceEeecccCCceEEEeeeeEEeccCC
Confidence 00 11122221 22223334444444445555556666665555544332110 000001111111111
Q ss_pred ChhhH--HHHHHHHhccHHHHhhcccCChhHHHHHh--hhhhhccCCCCCCCChHHHHHHHHhhcc--CCCCCccccccC
Q 048009 161 GQKDL--VEFVDLLLSPASKVLNKWFETDVLKATLA--TDAVIGTMSSVHTPGSGYVLLHHVMGET--DGNPGIWSYVEG 234 (531)
Q Consensus 161 ~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g 234 (531)
.+... .........+-.+. +..+.+...+. +.+++|. .+..+...++.- ..... ....+
T Consensus 196 ~P~~P~~~~~~~~~~~ts~~~----l~l~~lP~~lvIIGgG~IGl---------E~A~~~~~lG~~VTii~~~--~~L~~ 260 (542)
T 4b1b_A 196 RPHIPDDVEGAKELSITSDDI----FSLKKDPGKTLVVGASYVAL---------ECSGFLNSLGYDVTVAVRS--IVLRG 260 (542)
T ss_dssp EECCCSSSBTHHHHCBCHHHH----TTCSSCCCSEEEECCSHHHH---------HHHHHHHHHTCCEEEEESS--CSSTT
T ss_pred CCCCCCcccCCCccccCchhh----hccccCCceEEEECCCHHHH---------HHHHHHHhcCCeEEEeccc--ccccc
Confidence 11000 00000000111111 11111111111 2223321 111111111110 00011 12344
Q ss_pred chHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 235 GMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 235 G~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
-...+.+.+.+.+++.|+++++++.|+++...+ +++. |.+.++.++.+|.|++|+|-..
T Consensus 261 ~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~-~~~~-v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 261 FDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD-DKIL-VEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEETCCEEEEEEET-TEEE-EEETTSCEEEESEEEECSCEEE
T ss_pred cchhHHHHHHHHHHhhcceeecceEEEEEEecC-CeEE-EEEcCCCeEEEEEEEEcccccC
Confidence 467899999999999999999999999999877 6554 8888888899999999998554
No 61
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.24 E-value=4.7e-11 Score=121.90 Aligned_cols=58 Identities=16% Similarity=0.224 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHcCc--EEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 238 SVSMAIGSAAREAGA--HIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~--~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
.+.+.+.+.+++.|+ +++++++|+++..++++..+.|++.+|+++.||.||+|+|...
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLS 159 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEE
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCC
Confidence 556666777778887 8999999999998763445669999999999999999999654
No 62
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.23 E-value=2e-10 Score=116.54 Aligned_cols=58 Identities=12% Similarity=0.177 Sum_probs=49.7
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeC---CCc--EEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLA---DGA--QVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~---~g~--~~~ad~VV~aa~~~~ 295 (531)
...+...|.+.++++|++|+++++|++|..++ ++++|++. +|+ ++.||.||+|+|++.
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 45789999999999999999999999999865 45678773 575 689999999999997
No 63
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.23 E-value=6.3e-13 Score=134.52 Aligned_cols=59 Identities=14% Similarity=0.186 Sum_probs=50.1
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+++.|++|+++++|++|..++ ++...|++.+|+++.+|.||+|+|...
T Consensus 230 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~~v~~~~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 230 DSELRKQLTEQLRANGINVRTHENPAKVTKNA-DGTRHVVFESGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCCEEEEEECT-TSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEECCCcEEEcCEEEEccCCCc
Confidence 35788889999999999999999999998765 433458889998899999999998654
No 64
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.20 E-value=2.5e-11 Score=120.82 Aligned_cols=66 Identities=9% Similarity=0.232 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCc--EEEcCeEEecCChHhHHhhcCC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGA--QVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~--~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
..+...|.+.+++.|++|+++++|++|..++++..+.|++.+|+ ++.||.||.|+|.+..+.+++.
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g 173 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFG 173 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcC
Confidence 46788888888899999999999999998763434456778887 6999999999998886666654
No 65
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.20 E-value=7.6e-13 Score=134.27 Aligned_cols=49 Identities=37% Similarity=0.610 Sum_probs=42.0
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccccC
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIP 63 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~~ 63 (531)
|.++||+|||||++|++||..|+++|++|+|+|+++.+||.|....+.+
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP 71 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIP 71 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchh
Confidence 4469999999999999999999999999999999999999987654433
No 66
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.20 E-value=6.9e-11 Score=120.42 Aligned_cols=58 Identities=12% Similarity=0.104 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHcCc--EEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 238 SVSMAIGSAAREAGA--HIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~--~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
.+.+.+.+.+++.|+ +|+++++|+++..++++..+.|++.+|+++.||.||+|+|...
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 556667777778887 8999999999998763445669999999999999999999765
No 67
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.19 E-value=1.4e-10 Score=112.66 Aligned_cols=57 Identities=12% Similarity=0.086 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
..+.+.+.+.+++.|++++++++|++|..++ +.+.+|++.+| ++.+|+||+|+|.+.
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~~~~g-~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHFG-ERLRVVARDGR-QWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEET-TEEEEEETTSC-EEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEECC-CcEEEEEeCCC-EEEeCEEEECCCCCC
Confidence 3566777788888999999999999999876 55433788887 699999999999766
No 68
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.19 E-value=2.7e-11 Score=119.65 Aligned_cols=64 Identities=16% Similarity=0.283 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeC---CCcEEEcCeEEecCChHhHHhhcC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLA---DGAQVHSSIVLSNATPYKTFMDLV 301 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~---~g~~~~ad~VV~aa~~~~~~~~ll 301 (531)
..+...|.+.+++.|++|+.+++|++|..++ +++.+|++. ++.++.||.||.|.|.+..+.+.+
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~ 168 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEeC-CEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhc
Confidence 4678888888999999999999999999887 887778773 456899999999999887665554
No 69
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.19 E-value=1.6e-11 Score=115.77 Aligned_cols=55 Identities=24% Similarity=0.299 Sum_probs=49.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccccCCeeecccch
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPGFKFSRCSY 72 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~~g~~~d~g~~ 72 (531)
++||+|||||++||+||+.|+++|++|+||||++.+||++.+.. ..+..+|.|..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~-~~~~~~d~g~~ 56 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR-SDAGALDMGAQ 56 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE-ETTEEEECSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccc-cCCceeecCcc
Confidence 48999999999999999999999999999999999999998765 56777887754
No 70
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.19 E-value=4e-11 Score=123.21 Aligned_cols=64 Identities=14% Similarity=0.164 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeC-CC--cEEEcCeEEecCChHhHHhhcC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLA-DG--AQVHSSIVLSNATPYKTFMDLV 301 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~-~g--~~~~ad~VV~aa~~~~~~~~ll 301 (531)
..+...|.+.+++.|++|+.+++|++|..++ +.+++|++. +| .++.||.||.|+|.+..+.+.+
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~-g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr~~l 194 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLSD-PDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKL 194 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECCS-TTCEEEEEEETTEEEEEEESEEEECCGGGCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEEecCCceEEEEcCEEEECCCCcchhHHHc
Confidence 4788888889999999999999999999875 666778887 67 4799999999999887655544
No 71
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.18 E-value=2.7e-10 Score=117.30 Aligned_cols=59 Identities=20% Similarity=0.312 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeC--CCc--EEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLA--DGA--QVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~--~g~--~~~ad~VV~aa~~~~ 295 (531)
..+...|.+.+++.|++|+++++|++|..+++|++++|++. +|+ ++.||.||+|+|.+.
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 47889999999999999999999999987643788888775 664 689999999999765
No 72
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.18 E-value=1.6e-11 Score=125.34 Aligned_cols=60 Identities=15% Similarity=0.248 Sum_probs=49.8
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCce--eEEEeCCCc-EEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRV--NGVQLADGA-QVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~--~~V~~~~g~-~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+++.|++|+++++|++|..++++++ ..|++.+|+ ++.||.||+|+|...
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p 316 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQP 316 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEE
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCcc
Confidence 457888999999999999999999999997653443 357888887 799999999998654
No 73
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.18 E-value=1.5e-10 Score=118.18 Aligned_cols=49 Identities=33% Similarity=0.493 Sum_probs=42.6
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccccCC
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEELIPG 64 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~~g 64 (531)
+.++||+|||||++|++||..|++.|++|+|||+++.+||.+... ..+|
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~-~yPg 55 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWN-RYPG 55 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHC-CCTT
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccC-CCCc
Confidence 456899999999999999999999999999999999999987533 2444
No 74
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.18 E-value=3e-11 Score=119.65 Aligned_cols=61 Identities=10% Similarity=0.116 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLV 301 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll 301 (531)
..+.+.|.+.+++ ++|+++++|++|..++ +.+. |++.||+++.||.||.|.|.+..+.+.+
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~-~~v~-v~~~~g~~~~a~~vV~AdG~~S~vr~~l 187 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEEDA-DGVT-VWFTDGSSASGDLLIAADGSHSALRPWV 187 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEET-TEEE-EEETTSCEEEESEEEECCCTTCSSHHHH
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEecC-CcEE-EEEcCCCEEeeCEEEECCCcChHHHHHh
Confidence 4677778777766 8899999999999887 6554 8899999999999999999887655554
No 75
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.17 E-value=1.9e-12 Score=129.71 Aligned_cols=58 Identities=14% Similarity=0.108 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
..+.+.+.+.+++.|++++++++|++|..++ +....|++.+|+++.+|.||+|+|...
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~g~~i~~D~vv~a~G~~p 265 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVKNT-DGSLTLELEDGRSETVDCLIWAIGREP 265 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEECT-TSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CcEEEEEECCCcEEEcCEEEECCCCCc
Confidence 4688888999999999999999999998765 333458888998899999999988654
No 76
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.17 E-value=1.5e-10 Score=113.34 Aligned_cols=61 Identities=16% Similarity=0.191 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
..+.+.|.+.+++.|++|+++++|++|.. + + .|++.||+++.||.||.|.|.+....+.+.
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~-~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~ 167 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP-V-G---RLTLQTGEVLEADLIVGADGVGSKVRDSIG 167 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET-T-T---EEEETTSCEEECSEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C-C---EEEECCCCEEEcCEEEECCCccHHHHHHhc
Confidence 47888888889899999999999999987 4 5 478889988999999999999886666553
No 77
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.16 E-value=1.4e-12 Score=132.05 Aligned_cols=59 Identities=12% Similarity=0.210 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+++.|++|+++++|++|..++ ++...|++.+|+++.+|.||+++|...
T Consensus 234 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~~v~~~~G~~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 234 DETIREEVTKQLTANGIEIMTNENPAKVSLNT-DGSKHVTFESGKTLDVDVVMMAIGRIP 292 (495)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEEECT-TSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CceEEEEECCCcEEEcCEEEECCCCcc
Confidence 35788889999999999999999999998765 433558889998899999999998654
No 78
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.16 E-value=2.6e-10 Score=103.17 Aligned_cols=56 Identities=16% Similarity=0.238 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHc-CcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 238 SVSMAIGSAAREA-GAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 238 ~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
.+.+.|.+.+++. |++++ +++|++|..++ +++++|++.+|+++.||.||+|+|.+.
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~-~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEG-NRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-TEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC-CEEEEEEECCCCEEECCEEEECCCCCh
Confidence 5566777888887 89998 67999999877 777789999998899999999999765
No 79
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.15 E-value=6.2e-10 Score=114.63 Aligned_cols=59 Identities=12% Similarity=0.084 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEe---CCCc--EEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQL---ADGA--QVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~---~~g~--~~~ad~VV~aa~~~~ 295 (531)
..+...|.+.+++.|++|+++++|++|..++++++.+|.+ .+|+ .+.|+.||+|+|.+.
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 5788999999999999999999999999862288888875 4565 588999999999876
No 80
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.15 E-value=2.2e-10 Score=117.45 Aligned_cols=44 Identities=36% Similarity=0.453 Sum_probs=40.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeec
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s 58 (531)
+.++||+|||||++||+||..|+++|++|+|||+++.+||.+..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~ 57 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYW 57 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc
Confidence 34689999999999999999999999999999999999998753
No 81
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.15 E-value=1.2e-10 Score=119.41 Aligned_cols=64 Identities=25% Similarity=0.267 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEe--CCC-cEEEcCeEEecCChHhHHhhcCC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQL--ADG-AQVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~--~~g-~~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
..+.+.|.+.+++.|++|+++++|++|+.++ +.+. |++ .+| +++.||.||.|.|.++.+.+.+.
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~-~~v~-v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lG 214 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQDA-EAVE-VTVAGPSGPYPVRARYGVGCDGGRSTVRRLAA 214 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBCS-SCEE-EEEEETTEEEEEEESEEEECSCSSCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CeEE-EEEEeCCCcEEEEeCEEEEcCCCCchHHHHcC
Confidence 4678888888888999999999999999877 5554 666 678 68999999999999887777664
No 82
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.14 E-value=1.7e-10 Score=113.88 Aligned_cols=65 Identities=9% Similarity=0.095 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHc-CcEEEcCcceeEEEecCCCcee-EEEeCCCcEEEcCeEEecCChHhHHhhcCC
Q 048009 237 GSVSMAIGSAAREA-GAHIVTRAEVSQLMINDSGRVN-GVQLADGAQVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 237 ~~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~g~~~-~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
..+.+.|.+.+++. |++|+++++|++|..++ ++++ .|++.+|+++.||.||.|.|.+..+.+.+.
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~-~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRDE-RHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEECT-TSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC-CceEEEEEECCCCEEECCEEEECCCCChHHHHHhC
Confidence 47888888888888 99999999999999877 6653 588899988999999999999887666654
No 83
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.14 E-value=4.8e-12 Score=127.16 Aligned_cols=57 Identities=12% Similarity=0.040 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCc-EEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGA-QVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~-~~~ad~VV~aa~~~~ 295 (531)
..+.+.+.+.+++.|++++++++|++|..++ +. ..|++.+|+ ++.+|.||+|+|...
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~-~~v~~~~G~~~i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERDA-QG-TTLVAQDGTRLEGFDSVIWAVGRAP 264 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEET-TE-EEEEETTCCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-Ce-EEEEEeCCcEEEEcCEEEECCCCCc
Confidence 4678888899999999999999999998765 44 458888998 899999999988654
No 84
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.14 E-value=2.5e-10 Score=108.07 Aligned_cols=40 Identities=33% Similarity=0.420 Sum_probs=34.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCce
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGA 55 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~ 55 (531)
|++|||+|||||+|||+||++|+++|++|+|+|++. +||.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~ 43 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNR 43 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGG
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCe
Confidence 457999999999999999999999999999999964 4554
No 85
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.13 E-value=1e-12 Score=132.95 Aligned_cols=58 Identities=14% Similarity=0.141 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCC---cEEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADG---AQVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g---~~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+++.|++|+++++|++|..++ +.+. |++.++ +++.+|.||+++|...
T Consensus 220 ~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~-~~~~-v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 220 DEQVAKEAQKILTKQGLKILLGARVTGTEVKN-KQVT-VKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCEEEEEEECS-SCEE-EEEESSSEEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcC-CEEE-EEEEeCCCcEEEECCEEEEeeCCcc
Confidence 45788899999999999999999999999876 5544 666654 5789999999998654
No 86
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.13 E-value=2.7e-10 Score=108.85 Aligned_cols=55 Identities=5% Similarity=0.026 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 238 SVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
.+.+.+.+.+++.|+++++ ++|++|..++ +.+ .|++.+|+++.+|+||+|+|...
T Consensus 71 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~-~~~-~v~~~~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 71 DMIKVFNKHIEKYEVPVLL-DIVEKIENRG-DEF-VVKTKRKGEFKADSVILGIGVKR 125 (323)
T ss_dssp HHHHHHHHHHHTTTCCEEE-SCEEEEEEC---CE-EEEESSSCEEEEEEEEECCCCEE
T ss_pred HHHHHHHHHHHHcCCEEEE-EEEEEEEecC-CEE-EEEECCCCEEEcCEEEECcCCCC
Confidence 4455566667778999999 8999999876 554 48888888899999999999764
No 87
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.13 E-value=5.8e-10 Score=115.77 Aligned_cols=58 Identities=21% Similarity=0.302 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEe---CCCc--EEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQL---ADGA--QVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~---~~g~--~~~ad~VV~aa~~~~ 295 (531)
..+...|.+.+++.|++|+.++.|++|..++ |++.+|.+ .+|+ .+.|+.||+|+|.+.
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQD-GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecC-CEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 4788999999999999999999999999876 88888766 4676 489999999999887
No 88
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.13 E-value=2.1e-10 Score=117.68 Aligned_cols=64 Identities=13% Similarity=0.133 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCC----ceeEEEeCCC---cEEEcCeEEecCChHhHHhhcCC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSG----RVNGVQLADG---AQVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g----~~~~V~~~~g---~~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
..+...|.+.+++.|++|+++++|++|..++ + .+. |++.++ .++.||.||.|.|.++.+.+.+.
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~~~~~v~-v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~lg 190 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHD-DDAGAGVT-ARLAGPDGEYDLRAGYLVGADGNRSLVRESLG 190 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEEC-GGGCSEEE-EEEEETTEEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECC-CCccccEE-EEEEcCCCeEEEEeCEEEECCCCcchHHHHcC
Confidence 4688888999999999999999999999877 4 443 666665 67999999999999987666663
No 89
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.12 E-value=4.5e-12 Score=127.97 Aligned_cols=60 Identities=7% Similarity=0.022 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCC-cEEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADG-AQVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g-~~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+++.|++|+++++|++|..++++++..|++.+| +++.+|.||+|+|...
T Consensus 225 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 225 DECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKS 285 (479)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCC
Confidence 35788888999999999999999999998765243456888899 7899999999998654
No 90
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.12 E-value=1.2e-10 Score=118.56 Aligned_cols=64 Identities=16% Similarity=0.292 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEe--CCCc--EEEcCeEEecCChHhHHhhcC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQL--ADGA--QVHSSIVLSNATPYKTFMDLV 301 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~--~~g~--~~~ad~VV~aa~~~~~~~~ll 301 (531)
..+.+.|.+.+++.|++|+++++|++|..++ +++.+|++ .+|+ ++.||.||.|+|.+..+.+.+
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~-~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~l 178 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFEG-ERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQAV 178 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEET-TEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC-CEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHHc
Confidence 3678888888999999999999999999987 77766665 4574 799999999999987655555
No 91
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.12 E-value=4.8e-10 Score=104.78 Aligned_cols=41 Identities=34% Similarity=0.581 Sum_probs=37.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHHc-CCcEEEEccCCCCCcee
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARA-GLSVAVLERRHVIGGAA 56 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~-G~~V~v~E~~~~~GG~~ 56 (531)
.++||+|||||++||+||+.|+++ |.+|+|+|+++.+||.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 468999999999999999999997 99999999999988754
No 92
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.11 E-value=5.1e-10 Score=108.80 Aligned_cols=57 Identities=18% Similarity=0.127 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 238 SVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
.+.+.+.+.+++.|++++++++|++|..++++. +.|++.+|+++.+|+||+|+|...
T Consensus 75 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 75 DLVESLWAQAERYNPDVVLNETVTKYTKLDDGT-FETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp HHHHHHHHHHHTTCCEEECSCCEEEEEECTTSC-EEEEETTSCEEEEEEEEECCTTCS
T ss_pred HHHHHHHHHHHHhCCEEEcCCEEEEEEECCCce-EEEEECCCcEEEeeEEEEccCCCc
Confidence 445556666777899999999999999876234 458888898899999999999743
No 93
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.11 E-value=2.5e-12 Score=129.11 Aligned_cols=59 Identities=20% Similarity=0.143 Sum_probs=50.0
Q ss_pred chHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 235 GMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 235 G~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
....+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++++|+++.+|.||+|+|...
T Consensus 206 ~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~-~~v-~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 206 MDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA-KGA-RVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp SCHHHHHHHHHHHHHHTCEEECSCCEEEEEEET-TEE-EEEETTSCEEEESEEEECSCEEE
T ss_pred cCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC-CEE-EEEECCCeEEEcCEEEECcCCCc
Confidence 346788899999999999999999999999765 443 47777888899999999999765
No 94
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.11 E-value=2.9e-10 Score=117.24 Aligned_cols=62 Identities=16% Similarity=0.369 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCC------C---------cEEEcCeEEecCChHhHHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLAD------G---------AQVHSSIVLSNATPYKTFM 298 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~------g---------~~~~ad~VV~aa~~~~~~~ 298 (531)
..+.+.|.+.+++.|++|+++++|++|..++++++++|++.+ | .++.||.||.|.|.+..+.
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr 220 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLA 220 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHH
Confidence 478889999999999999999999999987646787888763 3 5799999999999887543
No 95
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.10 E-value=4.1e-10 Score=108.30 Aligned_cols=55 Identities=9% Similarity=-0.027 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChH
Q 048009 238 SVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPY 294 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~ 294 (531)
.+.+.+.+.+++.|++++++++|++|..++ +. +.|.+.+|+++.+|+||+|+|..
T Consensus 66 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~-~~-~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 66 DLVKGLVEQVAPFNPVYSLGERAETLEREG-DL-FKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHHGGGCCEEEESCCEEEEEEET-TE-EEEEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEECC-CE-EEEEECCCCEEEeCEEEECCCCC
Confidence 444555666677789999999999999876 54 34788888889999999999974
No 96
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.10 E-value=2.7e-11 Score=122.98 Aligned_cols=59 Identities=20% Similarity=0.180 Sum_probs=49.4
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcE-EEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQ-VHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~-~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.++++|++|+++++|++|..++ ++...|++.+|++ +.+|.||+++|...
T Consensus 216 d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~~~~v~~~~g~~~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 216 DESVINVLENDMKKNNINIVTFADVVEIKKVS-DKNLSIHLSDGRIYEHFDHVIYCVGRSP 275 (500)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-TTCEEEEETTSCEEEEESEEEECCCBCC
T ss_pred chhhHHHHHHHHHhCCCEEEECCEEEEEEEcC-CceEEEEECCCcEEEECCEEEECCCCCc
Confidence 35788889999999999999999999998765 3324588889987 99999999988654
No 97
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.08 E-value=2.9e-10 Score=109.16 Aligned_cols=55 Identities=11% Similarity=0.001 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChH
Q 048009 238 SVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPY 294 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~ 294 (531)
.+...+.+.+++.|++++++++|++|..++ +..+.|.+.+|+ +.+|+||+|+|..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~~~~g~-~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 68 ELINNLKEQMAKFDQTICLEQAVESVEKQA-DGVFKLVTNEET-HYSKTVIITAGNG 122 (332)
T ss_dssp HHHHHHHHHHTTSCCEEECSCCEEEEEECT-TSCEEEEESSEE-EEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHhCCcEEccCEEEEEEECC-CCcEEEEECCCE-EEeCEEEECCCCC
Confidence 555666677777899999999999999876 423458888887 9999999999973
No 98
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.08 E-value=1.4e-09 Score=112.08 Aligned_cols=58 Identities=14% Similarity=0.186 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEe---CCCc--EEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQL---ADGA--QVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~---~~g~--~~~ad~VV~aa~~~~ 295 (531)
..+...|.+.+++.|++|+.++.|++|..++ |++.+|.+ .+|+ .+.|+.||+|+|.+.
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMEN-GECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEET-TEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEEC-CEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 4788999999989999999999999999877 88888876 3675 688999999999887
No 99
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.07 E-value=7.2e-12 Score=126.82 Aligned_cols=57 Identities=14% Similarity=0.049 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeC--CC--cEEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLA--DG--AQVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~--~g--~~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+++. ++|+++++|++|..++ +++. |++. +| +++.+|.||+|+|...
T Consensus 214 d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~-~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 214 DEEMKRYAEKTFNEE-FYFDAKARVISTIEKE-DAVE-VIYFDKSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp CHHHHHHHHHHHHTT-SEEETTCEEEEEEECS-SSEE-EEEECTTCCEEEEEESEEEECSCCEE
T ss_pred CHHHHHHHHHHHhhC-cEEEECCEEEEEEEcC-CEEE-EEEEeCCCceEEEECCEEEEeeCCcc
Confidence 457888888888887 9999999999999876 6554 6664 67 5799999999998654
No 100
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.05 E-value=5.8e-10 Score=109.88 Aligned_cols=61 Identities=11% Similarity=0.087 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCC
Q 048009 238 SVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
.+.+.|.+.+ .|++|+++++|++|..++ +++. |++.+|+++.||.||.|.|.++...+.+.
T Consensus 100 ~l~~~L~~~~--~~~~i~~~~~v~~i~~~~-~~v~-v~~~~g~~~~ad~vV~AdG~~S~vr~~~~ 160 (397)
T 2vou_A 100 SIYGGLYELF--GPERYHTSKCLVGLSQDS-ETVQ-MRFSDGTKAEANWVIGADGGASVVRKRLL 160 (397)
T ss_dssp HHHHHHHHHH--CSTTEETTCCEEEEEECS-SCEE-EEETTSCEEEESEEEECCCTTCHHHHHHH
T ss_pred HHHHHHHHhC--CCcEEEcCCEEEEEEecC-CEEE-EEECCCCEEECCEEEECCCcchhHHHHhc
Confidence 5555565554 489999999999999877 6654 88899988999999999999887665543
No 101
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.04 E-value=8e-10 Score=112.16 Aligned_cols=57 Identities=14% Similarity=0.250 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHH-cCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAARE-AGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~-~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
..+...|.+.+++ .|++| ++++|++|..++ +++.+|.+.+|.++.||.||+|+|.+.
T Consensus 123 ~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~-g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 123 KRYREYMKKVCENQENLYI-KQEEVVDIIVKN-NQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHHHHHHHTCTTEEE-EESCEEEEEESS-SBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHHHHHHHHHhCCCCEE-EEeEEEEEEecC-CEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 3577788888887 59999 578999999887 888899999998999999999999875
No 102
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.04 E-value=1.2e-10 Score=115.07 Aligned_cols=56 Identities=16% Similarity=0.249 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHcCcEEEcCccee---------EEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVS---------QLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~---------~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
..+...|.+.+++.|++|+++++|+ +|..++ +++ +|++.+| ++.||.||+|+|++.
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~-~~v-~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN-THQ-IVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC-CeE-EEEECCc-EEECCEEEECCCccH
Confidence 5788999999999999999999999 888766 665 6777777 699999999999986
No 103
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.04 E-value=8.7e-11 Score=118.84 Aligned_cols=59 Identities=12% Similarity=0.090 Sum_probs=47.3
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCc-----EEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGA-----QVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~-----~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+++.|++|+++++|++|..++++.+ .|++.+++ ++.+|.||+++|...
T Consensus 226 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 226 DQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp CHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECccccc
Confidence 457888899999999999999999999998652444 47776553 789999999988543
No 104
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.03 E-value=4.7e-11 Score=121.26 Aligned_cols=58 Identities=17% Similarity=0.231 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+++.|++|+++++|++|..++ +++ .|++.+|+++.+|.||+|+|...
T Consensus 222 d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~-~~v-~v~~~~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 222 DADAALVLEESFAERGVRLFKNARAASVTRTG-AGV-LVTMTDGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp SHHHHHHHHHHHHHTTCEEETTCCEEEEEECS-SSE-EEEETTSCEEEESEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC-CEE-EEEECCCcEEEcCEEEECCCCCc
Confidence 35788889999999999999999999999876 554 47788888899999999999775
No 105
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.03 E-value=7.3e-12 Score=125.91 Aligned_cols=58 Identities=16% Similarity=0.150 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeC-C--Cc--EEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLA-D--GA--QVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~-~--g~--~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++. + |+ ++.+|.||+|+|...
T Consensus 209 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~~p 271 (464)
T 2eq6_A 209 DPETAALLRRALEKEGIRVRTKTKAVGYEKKK-DGL-HVRLEPAEGGEGEEVVVDKVLVAVGRKP 271 (464)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEE-EEEEEETTCCSCEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC-CEE-EEEEeecCCCceeEEEcCEEEECCCccc
Confidence 45788888999999999999999999998765 544 36665 6 76 799999999988554
No 106
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.03 E-value=1.1e-09 Score=105.27 Aligned_cols=55 Identities=13% Similarity=0.205 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEe---CCCcEEEcCeEEecCChHh
Q 048009 238 SVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQL---ADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~---~~g~~~~ad~VV~aa~~~~ 295 (531)
.+...+.+.+++.|+++++++ |++|..++ +.+. +.+ .++.++.+|.||+|+|...
T Consensus 85 ~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~-~~~~-v~~~~~~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 85 ELMDRMREQSTKFGTEIITET-VSKVDLSS-KPFK-LWTEFNEDAEPVTTDAIILATGASA 142 (338)
T ss_dssp HHHHHHHHHHHHTTCEEECSC-EEEEECSS-SSEE-EEETTCSSSCCEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHcCCEEEEeE-EEEEEEcC-CEEE-EEEEecCCCcEEEeCEEEECcCCCc
Confidence 455566777788899999998 99998876 5544 666 3667899999999999753
No 107
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.03 E-value=3.1e-09 Score=92.05 Aligned_cols=54 Identities=17% Similarity=0.112 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 238 SVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
.+.+.+.+.+++.|++++++ +|++|..++ +. ..|++++| ++.+|.||+|+|...
T Consensus 57 ~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~-~~-~~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 57 ELLRRLEAHARRYGAEVRPG-VVKGVRDMG-GV-FEVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CCCEEEECS-SS-EEEECSSC-EEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHcCCEEEeC-EEEEEEEcC-CE-EEEEECCC-EEEECEEEECCCCCC
Confidence 55666777788899999999 999999876 44 34888888 799999999999765
No 108
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.03 E-value=2.4e-09 Score=100.77 Aligned_cols=42 Identities=31% Similarity=0.491 Sum_probs=38.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHc--CCcEEEEccCCCCCceee
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARA--GLSVAVLERRHVIGGAAV 57 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~--G~~V~v~E~~~~~GG~~~ 57 (531)
.++||+|||||++||+||+.|+++ |++|+|+|+.+.+||.+.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~ 121 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAW 121 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccc
Confidence 358999999999999999999998 999999999999887653
No 109
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.02 E-value=6.7e-10 Score=112.39 Aligned_cols=64 Identities=14% Similarity=0.110 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCc---EEEcCeEEecCChHhHHhhcCC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGA---QVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~---~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
..+.+.|.+.+++.|++|+++++|++|..++ +.++ |++.+++ +++||+||.|.|.++...+.+.
T Consensus 106 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~-~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 106 SVTETHLEQWATGLGADIRRGHEVLSLTDDG-AGVT-VEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCEEEEEEEET-TEEE-EEEEETTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCEEECCcEEEEEEEcC-CeEE-EEEEcCCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 3677888888889999999999999999877 6554 7777664 7999999999999987777664
No 110
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.02 E-value=3.5e-10 Score=114.44 Aligned_cols=64 Identities=14% Similarity=0.111 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCc---EEEcCeEEecCChHhHHhhcCC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGA---QVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~---~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
..+.+.|.+.+++.|++|+++++|++|..++ +.++ |++.+++ ++.||+||.|.|.++...+.+.
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~-~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDEG-DHVV-VEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEECS-SCEE-EEEECSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CEEE-EEEEcCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 3678888888888999999999999999887 5555 7777764 7999999999999987777664
No 111
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.02 E-value=1.2e-09 Score=111.49 Aligned_cols=57 Identities=18% Similarity=0.229 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHH-cCcEEEcCcceeEEEe-cCCC------ceeEEEeC---CCc--EEEcCeEEecCChHh
Q 048009 238 SVSMAIGSAARE-AGAHIVTRAEVSQLMI-NDSG------RVNGVQLA---DGA--QVHSSIVLSNATPYK 295 (531)
Q Consensus 238 ~l~~~l~~~~~~-~G~~i~~~~~V~~I~~-~~~g------~~~~V~~~---~g~--~~~ad~VV~aa~~~~ 295 (531)
.+...|.+.+++ .|++|++++.|++|.. ++ + ++.+|.+. +|+ ++.|+.||+|+|.+.
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~-g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDK-IGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGG-TTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCC-CCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 567778888888 6999999999999998 44 5 78888775 565 689999999999877
No 112
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.02 E-value=3.1e-11 Score=121.99 Aligned_cols=60 Identities=13% Similarity=0.011 Sum_probs=47.3
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCC---C----cEEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLAD---G----AQVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~---g----~~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+++.|++|+++++|++|..++++....|++.+ | +++.+|.||+++|...
T Consensus 227 d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 227 DSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecccc
Confidence 4578888899999999999999999999876534233477765 2 5789999999988554
No 113
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.02 E-value=5.5e-10 Score=110.69 Aligned_cols=60 Identities=8% Similarity=0.136 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcC
Q 048009 238 SVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLV 301 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll 301 (531)
.|-+.|.+ ..+.+|+++++|++++..+++++. |+++||++++||.||-|-|..+...+.+
T Consensus 113 ~L~~~L~~---~~~~~v~~~~~v~~~~~~~~~~v~-v~~~dG~~~~adlvVgADG~~S~vR~~l 172 (412)
T 4hb9_A 113 ELKEILNK---GLANTIQWNKTFVRYEHIENGGIK-IFFADGSHENVDVLVGADGSNSKVRKQY 172 (412)
T ss_dssp HHHHHHHT---TCTTTEECSCCEEEEEECTTSCEE-EEETTSCEEEESEEEECCCTTCHHHHHH
T ss_pred HHHHHHHh---hccceEEEEEEEEeeeEcCCCeEE-EEECCCCEEEeeEEEECCCCCcchHHHh
Confidence 34444433 335679999999999876645554 8999999999999999989888766554
No 114
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.01 E-value=8.4e-10 Score=112.47 Aligned_cols=56 Identities=18% Similarity=0.258 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHH-cCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 238 SVSMAIGSAARE-AGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 238 ~l~~~l~~~~~~-~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
.+...|.+.+++ .|++| ++++|++|..++ +++++|++.+|.++.||.||+|+|.+.
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~-g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVEN-DRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEESS-SBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEecC-CEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 567778888887 69999 578999999887 888899999998899999999999875
No 115
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.01 E-value=8.2e-09 Score=102.21 Aligned_cols=59 Identities=20% Similarity=0.265 Sum_probs=52.8
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.++++|++|+++++|++|..++ +++.+|+++||+++.||.||+++|...
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~v~l~dG~~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG-TKVTGVRMQDGSVIPADIVIVGIGIVP 251 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESS-SBEEEEEESSSCEEECSEEEECSCCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecC-CcEEEEEeCCCCEEEcCEEEECCCCcc
Confidence 35788888999999999999999999999877 888889999999999999999998654
No 116
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.00 E-value=1.2e-11 Score=124.88 Aligned_cols=59 Identities=8% Similarity=0.055 Sum_probs=47.3
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEe-----CCCcEEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQL-----ADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~-----~~g~~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+++.|++|+++++|++|..++ ++...|++ .+++++.+|.||+++|...
T Consensus 219 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p 282 (474)
T 1zmd_A 219 DMEISKNFQRILQKQGFKFKLNTKVTGATKKS-DGKIDVSIEAASGGKAEVITCDVLLVCIGRRP 282 (474)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEECT-TSCEEEEEEETTSCCCEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCceEEEEEEcC-CceEEEEEEecCCCCceEEEcCEEEECcCCCc
Confidence 45788889999999999999999999999876 44223553 4566899999999998654
No 117
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.00 E-value=3e-10 Score=113.87 Aligned_cols=65 Identities=20% Similarity=0.273 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeC---CCc--EEEcCeEEecCChHhHHhhcCC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLA---DGA--QVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~---~g~--~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
..+.+.|.+.+++.|++|+++++|++|..++ +++++|++. +|+ ++.||.||.|.|.+..+.+.+.
T Consensus 100 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~~l~ 169 (453)
T 3atr_A 100 PLYNQRVLKEAQDRGVEIWDLTTAMKPIFED-GYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRSKLP 169 (453)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGGGSC
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC-CEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHHhcC
Confidence 3677888888888999999999999999877 777777765 675 7899999999999886665553
No 118
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.00 E-value=6.3e-09 Score=107.36 Aligned_cols=59 Identities=14% Similarity=0.179 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHcC-cEEEcCcceeEEEecCCCceeEEEe---CCCc--EEEcCeEEecCChHhH
Q 048009 237 GSVSMAIGSAAREAG-AHIVTRAEVSQLMINDSGRVNGVQL---ADGA--QVHSSIVLSNATPYKT 296 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G-~~i~~~~~V~~I~~~~~g~~~~V~~---~~g~--~~~ad~VV~aa~~~~~ 296 (531)
..+...|.+.+++.| ++|+++++|++|..++ +++.+|.. .+|+ .+.|+.||+|+|.+..
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~ 198 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD-GHVRGLVAMNMMEGTLVQIRANAVVMATGGAGR 198 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEET-TEEEEEEEEETTTTEEEEEECSCEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcc
Confidence 478888999888888 9999999999999887 88877754 5676 6899999999998763
No 119
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.99 E-value=2.6e-09 Score=107.92 Aligned_cols=60 Identities=17% Similarity=0.065 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecC-CCceeEEEe--C-CC--cEEEcCeEEecCChHhH
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMIND-SGRVNGVQL--A-DG--AQVHSSIVLSNATPYKT 296 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~-~g~~~~V~~--~-~g--~~~~ad~VV~aa~~~~~ 296 (531)
..+.+.|.+.+++.|++|+++++|++|..++ ++..+.|++ . +| +++.||.||.|+|....
T Consensus 166 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 166 RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 4677788888888999999999999998741 133455777 4 66 46899999999998773
No 120
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.99 E-value=1e-11 Score=125.27 Aligned_cols=58 Identities=17% Similarity=0.182 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHH-HHcCcEEEcCcceeEEEecCCCceeEEEeC--CC--cEEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAA-REAGAHIVTRAEVSQLMINDSGRVNGVQLA--DG--AQVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~-~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~--~g--~~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+ ++.|++|+++++|++|..++ +++ .|++. +| +++.+|.||+|+|...
T Consensus 214 d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~~~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 214 DEDVTNALVGALAKNEKMKFMTSTKVVGGTNNG-DSV-SLEVEGKNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp CHHHHHHHHHHHHHHTCCEEECSCEEEEEEECS-SSE-EEEEECC---EEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC-CeE-EEEEEcCCCceEEEECCEEEECCCccc
Confidence 356788889999 99999999999999999866 443 36665 66 5799999999998654
No 121
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.99 E-value=4.9e-09 Score=98.12 Aligned_cols=42 Identities=31% Similarity=0.548 Sum_probs=38.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHHc--CCcEEEEccCCCCCceee
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARA--GLSVAVLERRHVIGGAAV 57 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~--G~~V~v~E~~~~~GG~~~ 57 (531)
.++||+|||||++||+||+.|+++ |++|+|+|+++.+||.+.
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~ 107 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccccc
Confidence 347999999999999999999998 999999999999987543
No 122
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.99 E-value=1.2e-10 Score=117.97 Aligned_cols=59 Identities=14% Similarity=0.085 Sum_probs=45.8
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCC---Cc--EEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLAD---GA--QVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~---g~--~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+++.|++++++++|++|...+++.+ .|++.+ |+ ++.+|.||+++|...
T Consensus 224 d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~p 287 (488)
T 3dgz_A 224 DQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQL-QVTWEDHASGKEDTGTFDTVLWAIGRVP 287 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCE-EEEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcE-EEEEEeCCCCeeEEEECCEEEEcccCCc
Confidence 457888899999999999999999999987542443 355543 54 478999999988553
No 123
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.98 E-value=1.2e-09 Score=107.50 Aligned_cols=65 Identities=18% Similarity=0.144 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEe-CCCc--EEEcCeEEecCChHhHHhhcCC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQL-ADGA--QVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~-~~g~--~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
..+.+.|.+.+.+.|++|+++++|++|..++++.+ .|++ .+|+ ++.||.||.|.|.+....+.+.
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l~ 170 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHGISRQSIP 170 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTCSTGGGSC
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCcHHHHhcC
Confidence 35777788888888999999999999987642333 4777 6887 7999999999999886666653
No 124
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.98 E-value=3.6e-09 Score=103.10 Aligned_cols=55 Identities=11% Similarity=0.183 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 238 SVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
.+...+.+.+++.|++++++++|++|..++ +.+ .|.+.+|+ +.+|+||+|+|.+.
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~~g~-~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADD-AYY-TIATTTET-YHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS-SSE-EEEESSCC-EEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECC-CeE-EEEeCCCE-EEeCEEEECCCCCC
Confidence 456667777788899999999999999876 444 47777774 99999999999775
No 125
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.97 E-value=1.7e-11 Score=122.98 Aligned_cols=45 Identities=27% Similarity=0.483 Sum_probs=40.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccc
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEEL 61 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~ 61 (531)
.++||+|||||++|++||..|++.|++|+|+|+ +.+||.|....+
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~ 48 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGC 48 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCc
Confidence 358999999999999999999999999999999 789999875443
No 126
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.96 E-value=1.9e-09 Score=109.77 Aligned_cols=56 Identities=11% Similarity=0.256 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHc-CcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 238 SVSMAIGSAAREA-GAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 238 ~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
.+...+.+.+++. |++|+ +.+|+.|..++ +++.+|.+.+|+++.||.||+|+|.+.
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~-g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSANS-GKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-TEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEecC-CEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 5677777778774 89995 56999998877 888889999998999999999999774
No 127
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.96 E-value=1.2e-09 Score=107.52 Aligned_cols=60 Identities=5% Similarity=0.087 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcC
Q 048009 238 SVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLV 301 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll 301 (531)
.|.+.|.+.++ +++|+++++|++|..++ +.+. |++.+|+++.||.||.|.|.+....+.+
T Consensus 129 ~l~~~L~~~~~--~~~i~~~~~v~~i~~~~-~~v~-v~~~~g~~~~ad~vV~AdG~~S~vR~~l 188 (398)
T 2xdo_A 129 DLRAILLNSLE--NDTVIWDRKLVMLEPGK-KKWT-LTFENKPSETADLVILANGGMSKVRKFV 188 (398)
T ss_dssp HHHHHHHHTSC--TTSEEESCCEEEEEECS-SSEE-EEETTSCCEEESEEEECSCTTCSCCTTT
T ss_pred HHHHHHHhhcC--CCEEEECCEEEEEEECC-CEEE-EEECCCcEEecCEEEECCCcchhHHhhc
Confidence 56666666553 36899999999999877 5554 8889998899999999999887555544
No 128
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.95 E-value=1.9e-09 Score=106.38 Aligned_cols=60 Identities=18% Similarity=0.249 Sum_probs=53.5
Q ss_pred chHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 235 GMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 235 G~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
....+.+.+.+.++++|++|+++++|++|..++ +++.+|++.||+++.||.||+++|...
T Consensus 182 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~V~~~dG~~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 182 VTPEISSYFHDRHSGAGIRMHYGVRATEIAAEG-DRVTGVVLSDGNTLPCDLVVVGVGVIP 241 (404)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETTSCEEECSEEEECCCEEE
T ss_pred cCHHHHHHHHHHHHhCCcEEEECCEEEEEEecC-CcEEEEEeCCCCEEEcCEEEECcCCcc
Confidence 346788899999999999999999999999877 788889999999999999999998654
No 129
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.95 E-value=7e-09 Score=105.57 Aligned_cols=54 Identities=33% Similarity=0.493 Sum_probs=40.5
Q ss_pred ccccccccc-CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC--------CCCceeecc
Q 048009 6 FTSTTSALK-EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH--------VIGGAAVTE 59 (531)
Q Consensus 6 ~~~~~~~~~-~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~--------~~GG~~~s~ 59 (531)
++..+..++ +.++||+|||||++|++||..|++.|++|+|+|+.+ .+||.|...
T Consensus 20 ~m~~~~~~~~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~ 82 (519)
T 3qfa_A 20 HMNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNV 82 (519)
T ss_dssp ------CCCSSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHH
T ss_pred CCCcccccCcCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCc
Confidence 344444444 346999999999999999999999999999999965 677776543
No 130
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.94 E-value=7.6e-09 Score=98.20 Aligned_cols=55 Identities=11% Similarity=0.065 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 238 SVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
.+.+.+.+.+++.|+++++ ++|++|..++ +.+ .|++.+|+++.+|+||+|+|...
T Consensus 60 ~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~-~~~-~v~~~~g~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 60 DFMQPWQEQCFRFGLKHEM-TAVQRVSKKD-SHF-VILAEDGKTFEAKSVIIATGGSP 114 (311)
T ss_dssp HHHHHHHHHHHTTSCEEEC-SCEEEEEEET-TEE-EEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHcCCEEEE-EEEEEEEEcC-CEE-EEEEcCCCEEECCEEEECCCCCC
Confidence 3444455556778999988 7999998876 543 37778888899999999999654
No 131
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.94 E-value=4.9e-09 Score=104.87 Aligned_cols=43 Identities=30% Similarity=0.373 Sum_probs=39.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCC--cEEEEccCCCCCceeec
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGL--SVAVLERRHVIGGAAVT 58 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~~~~GG~~~s 58 (531)
..+||+|||||++||+||..|+++|+ +|+|||+++.+||.+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~ 49 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecC
Confidence 46899999999999999999999999 99999999999987643
No 132
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.94 E-value=5.6e-11 Score=125.29 Aligned_cols=45 Identities=36% Similarity=0.511 Sum_probs=41.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecc
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTE 59 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~ 59 (531)
...+||+|||||++||+||+.|+++|++|+|+|+++.+||.+...
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~ 433 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQE 433 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHH
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeec
Confidence 346899999999999999999999999999999999999987653
No 133
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.93 E-value=7.4e-09 Score=98.97 Aligned_cols=40 Identities=48% Similarity=0.797 Sum_probs=36.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceee
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAV 57 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~ 57 (531)
++||+|||||++||+||..|+++|++|+|+|++ .+||.+.
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 47 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIA 47 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccc
Confidence 589999999999999999999999999999998 6787654
No 134
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.93 E-value=9.4e-11 Score=118.09 Aligned_cols=57 Identities=16% Similarity=0.209 Sum_probs=47.1
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+++.|++|+++++|++|..++ +. ..|++++ .++.+|.||+|+|.+.
T Consensus 215 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~-~~v~~~~-~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 215 DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMD-GE-FVLTTTH-GELRADKLLVATGRTP 271 (467)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTCCEEEEEEET-TE-EEEEETT-EEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC-CE-EEEEECC-cEEEcCEEEECCCCCc
Confidence 45788899999999999999999999998765 43 4477764 4699999999999765
No 135
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.92 E-value=4.3e-09 Score=101.01 Aligned_cols=54 Identities=11% Similarity=0.161 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 238 SVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
.+.+.+.+.+++.|++++.++ |++|..++ +.+. |++ +|+++.+|+||+|+|.+.
T Consensus 71 ~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~-~~~~-v~~-~~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 71 ELTDKFRKQSERFGTTIFTET-VTKVDFSS-KPFK-LFT-DSKAILADAVILAIGAVA 124 (333)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-CCEEECSS-SSEE-EEC-SSEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHCCCEEEEeE-EEEEEEcC-CEEE-EEE-CCcEEEcCEEEECCCCCc
Confidence 455556666778899999986 99998766 5443 767 777899999999999765
No 136
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.91 E-value=4.1e-09 Score=104.25 Aligned_cols=63 Identities=16% Similarity=0.158 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHH-cC-cEEEcCcceeEEEecCCCceeEEEeCC---C--cEEEcCeEEecCChHhHHhhcCC
Q 048009 237 GSVSMAIGSAARE-AG-AHIVTRAEVSQLMINDSGRVNGVQLAD---G--AQVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 237 ~~l~~~l~~~~~~-~G-~~i~~~~~V~~I~~~~~g~~~~V~~~~---g--~~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
..|.+.|.+.+++ .| ++|+++++|++|.. + +.+. |++.+ | +++.||.||.|.|.++...+.+.
T Consensus 107 ~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~-~~v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~ 176 (410)
T 3c96_A 107 GELQMILLAAVRERLGQQAVRTGLGVERIEE-R-DGRV-LIGARDGHGKPQALGADVLVGADGIHSAVRAHLH 176 (410)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-E-TTEE-EEEEEETTSCEEEEEESEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHHHhhCCCcEEEECCEEEEEec-C-CccE-EEEecCCCCCceEEecCEEEECCCccchhHHHhc
Confidence 3677778887776 36 58999999999988 5 5554 66654 7 47899999999999887766553
No 137
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.91 E-value=7.8e-09 Score=105.94 Aligned_cols=59 Identities=17% Similarity=0.223 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhH
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKT 296 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~ 296 (531)
..+...|.+.+++.|++++.+ +|++|..++++.+++|++.+|+++.||.||.|+|.+..
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 578889999999999999999 89999986536667788999988999999999998874
No 138
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.90 E-value=8e-09 Score=97.30 Aligned_cols=34 Identities=35% Similarity=0.618 Sum_probs=32.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++||+|||||++||+||..|+++|++|+|+|+++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3899999999999999999999999999999965
No 139
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.89 E-value=1.2e-08 Score=96.97 Aligned_cols=40 Identities=38% Similarity=0.537 Sum_probs=35.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCcee
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAA 56 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~ 56 (531)
+.|||+|||||+|||+||.+|+++|++|+|+|+.. .||.|
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~-~gg~~ 42 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM-AGGVA 42 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS-GGGCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCcc
Confidence 35999999999999999999999999999999964 44443
No 140
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.89 E-value=1.5e-08 Score=104.04 Aligned_cols=59 Identities=17% Similarity=0.195 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHc-CcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhH
Q 048009 237 GSVSMAIGSAAREA-GAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKT 296 (531)
Q Consensus 237 ~~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~ 296 (531)
..+.+.|.+.+++. |++++++ +|++|..++++.+++|++.+|+++.||.||.|+|.+..
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 46889999999998 9999999 99999886546677899999988999999999998874
No 141
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.89 E-value=3e-08 Score=103.28 Aligned_cols=57 Identities=21% Similarity=0.214 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHc-Cc-EEEcCcceeEEEecCCC---ceeEEEe---CCCc--EEEcCeEEecCChHh
Q 048009 238 SVSMAIGSAAREA-GA-HIVTRAEVSQLMINDSG---RVNGVQL---ADGA--QVHSSIVLSNATPYK 295 (531)
Q Consensus 238 ~l~~~l~~~~~~~-G~-~i~~~~~V~~I~~~~~g---~~~~V~~---~~g~--~~~ad~VV~aa~~~~ 295 (531)
.+...|.+.+++. |+ +|+.++.|++|..++ + +++||.. .+|+ .+.|+.||+|+|.+.
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~-~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDN-NDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECT-TCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcC-CccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 4667777778887 99 999999999999877 6 8888775 4665 589999999999876
No 142
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.89 E-value=1.3e-08 Score=97.09 Aligned_cols=41 Identities=41% Similarity=0.858 Sum_probs=36.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceee
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAV 57 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~ 57 (531)
.++||+|||||++|++||+.|+++|++|+|+|+ ..+||.+.
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~ 55 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTA 55 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGG
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCcccc
Confidence 358999999999999999999999999999999 46777653
No 143
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.89 E-value=1.2e-08 Score=97.88 Aligned_cols=41 Identities=46% Similarity=0.617 Sum_probs=36.0
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCcee
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAA 56 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~ 56 (531)
+.++||+|||||++|++||..|+++|++|+|+|+. .+||.+
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 52 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGAL 52 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGG
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCce
Confidence 35689999999999999999999999999999975 566654
No 144
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.88 E-value=1.1e-08 Score=97.03 Aligned_cols=57 Identities=14% Similarity=0.221 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHcCcEEEcCcceeEEEecCC-CceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 239 VSMAIGSAAREAGAHIVTRAEVSQLMINDS-GRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 239 l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~-g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
+.+.+.+.+++.|++++++++|+.|..+.+ +..+.|.+.+|+++.+|+||+|+|...
T Consensus 58 ~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 58 LAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKW 115 (310)
T ss_dssp HHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 344455556778999999999999986531 223458888898899999999999754
No 145
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.88 E-value=1e-08 Score=106.42 Aligned_cols=57 Identities=16% Similarity=0.253 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHc--CcEEEcCcceeEEEecCCC---ceeEEEe---CCCc--EEEcCeEEecCChHh
Q 048009 238 SVSMAIGSAAREA--GAHIVTRAEVSQLMINDSG---RVNGVQL---ADGA--QVHSSIVLSNATPYK 295 (531)
Q Consensus 238 ~l~~~l~~~~~~~--G~~i~~~~~V~~I~~~~~g---~~~~V~~---~~g~--~~~ad~VV~aa~~~~ 295 (531)
.+...|.+.++++ |++|+.++.|++|..++ + ++.||.. .+|+ .+.|+.||+|+|...
T Consensus 167 ~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~-~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 167 SYKVIVAEAAKNALGQDRIIERIFIVKLLLDK-NTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp SHHHHHHHHHHHHHCTTTEECSEEECCCEECS-SSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEEceEEEEEEEeC-CccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 5777888888887 99999999999999887 5 8888865 3554 588999999999776
No 146
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.87 E-value=2.5e-08 Score=100.06 Aligned_cols=58 Identities=21% Similarity=0.279 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCC-CcEEEcCeEEecCChHhH
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLAD-GAQVHSSIVLSNATPYKT 296 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~-g~~~~ad~VV~aa~~~~~ 296 (531)
..+...|.+.+++.|++|+.+++| +|..++ +++.+|.+.+ +.++.+|.||+|+|.+..
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~-~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKD-GKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEET-TEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeC-CEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 467888888888889999999999 998877 8887777642 224789999999998873
No 147
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.87 E-value=2.4e-09 Score=107.66 Aligned_cols=43 Identities=33% Similarity=0.542 Sum_probs=40.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecc
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTE 59 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~ 59 (531)
++||+|||||++|++||..|+++|++|+|+|+++.+||.|...
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~ 46 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYS 46 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccccc
Confidence 5899999999999999999999999999999999999998653
No 148
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.86 E-value=9.1e-09 Score=103.55 Aligned_cols=39 Identities=21% Similarity=0.200 Sum_probs=36.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcC-----CcEEEEccCCCCCc
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAG-----LSVAVLERRHVIGG 54 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G-----~~V~v~E~~~~~GG 54 (531)
..+||+|||||++||+||..|+++| .+|+|||+++.+|.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~ 72 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRW 72 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCC
Confidence 3579999999999999999999999 99999999998873
No 149
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.85 E-value=1.5e-08 Score=96.58 Aligned_cols=40 Identities=38% Similarity=0.538 Sum_probs=35.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCcee
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAA 56 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~ 56 (531)
.++||+|||||++|++||..|+++|++|+|+|+. .+||.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 43 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQL 43 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceE
Confidence 3589999999999999999999999999999974 566654
No 150
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.84 E-value=2.5e-08 Score=101.51 Aligned_cols=58 Identities=12% Similarity=0.229 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHcCcEEEcCcceeEEEecCC-CceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 238 SVSMAIGSAAREAGAHIVTRAEVSQLMINDS-GRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~-g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
.+...+.+.+++.|++++.+++|++|..+.+ +..+.|++.+|+++.+|+||+|+|...
T Consensus 268 ~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 268 KLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKW 326 (521)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCc
Confidence 3444556667788999999999999986421 223458888998899999999999754
No 151
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.84 E-value=4.2e-08 Score=100.16 Aligned_cols=60 Identities=12% Similarity=0.237 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHH-cCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHH
Q 048009 237 GSVSMAIGSAARE-AGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTF 297 (531)
Q Consensus 237 ~~l~~~l~~~~~~-~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~ 297 (531)
..+.+.|.+.+++ .|++++.+ +|++|..++++.+++|++.+|+++.||.||.|.|.+..+
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 4688888888988 89999999 699998875366667888887789999999999988743
No 152
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.82 E-value=4.7e-09 Score=107.62 Aligned_cols=60 Identities=17% Similarity=0.239 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCC---C--cEEEcCeEEecCChHhHHhhcCC
Q 048009 238 SVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLAD---G--AQVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 238 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~---g--~~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
.+.+.|.+.+++. |+++++|++|..++ +.++ |++.+ | .++.||+||.|.|.++...+.+.
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~-~~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 203 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRD-DHVR-ATITDLRTGATRAVHARYLVACDGASSPTRKALG 203 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECS-SCEE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeC-CEEE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcC
Confidence 5666777777766 99999999999887 6555 66554 6 36899999999999987666653
No 153
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.82 E-value=1.5e-08 Score=105.75 Aligned_cols=66 Identities=12% Similarity=0.068 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHcCc--EEEcCcceeEEEecCC--CceeEEEeC------CC--cEEEcCeEEecCChHhHHhhcCC
Q 048009 237 GSVSMAIGSAAREAGA--HIVTRAEVSQLMINDS--GRVNGVQLA------DG--AQVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~--~i~~~~~V~~I~~~~~--g~~~~V~~~------~g--~~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
..+.+.|.+.+++.|+ +|+++++|++|..+++ +..+.|++. +| ++++||+||.|.|.++...+.+.
T Consensus 141 ~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 141 ARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 4678888899999987 9999999999998652 222346554 46 47899999999999987777764
No 154
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.81 E-value=2.4e-08 Score=101.75 Aligned_cols=59 Identities=14% Similarity=0.212 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhH
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKT 296 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~ 296 (531)
..+...|.+.+++.|++++.+ +|++|..++++.+++|++.+|+++.||.||.|+|.+..
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 478888999999999999999 99999986546677799999988999999999998874
No 155
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.80 E-value=3.4e-08 Score=99.52 Aligned_cols=43 Identities=33% Similarity=0.637 Sum_probs=40.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeec
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s 58 (531)
.++||+|||||++|++||..|++.|++|+|+|+++.+||.|..
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~ 47 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLN 47 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccC
Confidence 4699999999999999999999999999999999899998754
No 156
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.80 E-value=2.9e-08 Score=99.49 Aligned_cols=41 Identities=17% Similarity=0.308 Sum_probs=38.8
Q ss_pred CcEEEECCChhHHHHHHHHHH---cCCc---EEEEccCCCCCceeec
Q 048009 18 WDALVIGGGHNGLTAAAYLAR---AGLS---VAVLERRHVIGGAAVT 58 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~---~G~~---V~v~E~~~~~GG~~~s 58 (531)
+||+|||||++||+||..|++ .|++ |+|||+++.+||.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 699999999999999999999 9999 9999999999998764
No 157
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.77 E-value=8.5e-09 Score=103.91 Aligned_cols=59 Identities=17% Similarity=0.180 Sum_probs=50.9
Q ss_pred chHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 235 GMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 235 G~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
....+.+.+.+.+++.|++|+++++|++|..++ +++. |++.+|+++.+|.||+|+|...
T Consensus 200 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~-v~~~~g~~i~aD~Vv~a~G~~p 258 (472)
T 3iwa_A 200 TSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN-GKVA-RVITDKRTLDADLVILAAGVSP 258 (472)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEE-EEEESSCEEECSEEEECSCEEE
T ss_pred cCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC-CeEE-EEEeCCCEEEcCEEEECCCCCc
Confidence 346788899999999999999999999999866 6665 7888998999999999998653
No 158
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.77 E-value=1.4e-08 Score=102.64 Aligned_cols=42 Identities=36% Similarity=0.654 Sum_probs=39.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeec
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s 58 (531)
++||+|||||++|++||..|+++|++|+|+|+++.+||.|..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 46 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLN 46 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccce
Confidence 589999999999999999999999999999999999998754
No 159
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.76 E-value=1.5e-08 Score=103.36 Aligned_cols=53 Identities=19% Similarity=0.293 Sum_probs=42.1
Q ss_pred HHHcCcEEEcCcceeEEEec----CCCceeEEEeC--CCc--EEEcC-eEEecCChHhHHhhcC
Q 048009 247 AREAGAHIVTRAEVSQLMIN----DSGRVNGVQLA--DGA--QVHSS-IVLSNATPYKTFMDLV 301 (531)
Q Consensus 247 ~~~~G~~i~~~~~V~~I~~~----~~g~~~~V~~~--~g~--~~~ad-~VV~aa~~~~~~~~ll 301 (531)
+.+.+.+|++++.|++|..+ + ++++||++. +|+ ++.|+ .||+++|...+ .+||
T Consensus 237 ~~r~NL~V~t~a~V~rIl~d~~~~~-~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~S-PqLL 298 (583)
T 3qvp_A 237 YQRPNLQVLTGQYVGKVLLSQNGTT-PRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVS-PTIL 298 (583)
T ss_dssp TTCTTEEEECSCEEEEEEEECSSSS-CEEEEEEEESSTTCEEEEEEEEEEEECSCTTTH-HHHH
T ss_pred hcCCCcEEEcCCEEEEEEeccCCCC-CEEEEEEEEecCCcEEEEEECCEEEEeCCccCC-HHHH
Confidence 34668999999999999987 5 789999875 565 56786 59999998875 5554
No 160
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.76 E-value=6.3e-09 Score=98.85 Aligned_cols=45 Identities=38% Similarity=0.635 Sum_probs=39.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecccc
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTEEL 61 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~~~ 61 (531)
.+|||+|||||+|||+||.+|+++|++|+|+|+ ..+||.|....+
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~~~~~~ 49 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQMANTEE 49 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGGGGCSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCeeecccc
Confidence 469999999999999999999999999999998 468998865443
No 161
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.75 E-value=2e-08 Score=100.98 Aligned_cols=41 Identities=37% Similarity=0.647 Sum_probs=37.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeec
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s 58 (531)
++||+|||||++|++||..|+++|++|+|+|++ .+||.|..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~ 43 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLN 43 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccc
Confidence 589999999999999999999999999999998 78887754
No 162
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.73 E-value=1.8e-08 Score=101.74 Aligned_cols=42 Identities=40% Similarity=0.745 Sum_probs=39.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeec
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s 58 (531)
++||+|||||++|++||..|++.|++|+|+|+++.+||.|..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~ 47 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLN 47 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceee
Confidence 589999999999999999999999999999999999988754
No 163
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.71 E-value=3.3e-08 Score=98.99 Aligned_cols=57 Identities=2% Similarity=-0.045 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
...+.+.+.+.+++.|++|+++++|++|..++ +++ .|++++| ++.+|.||+|+|...
T Consensus 188 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v-~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 188 DKEMVAEVQKSLEKQAVIFHFEETVLGIEETA-NGI-VLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp CHHHHHHHHHHHHTTTEEEEETCCEEEEEECS-SCE-EEEESSC-EEEESEEEECSCCBC
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC-CeE-EEEECCC-EEEeCEEEECcCCCC
Confidence 46788899999999999999999999999766 666 6888777 799999999988654
No 164
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.71 E-value=4.2e-08 Score=98.30 Aligned_cols=41 Identities=32% Similarity=0.576 Sum_probs=38.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeec
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s 58 (531)
++||+|||||++|++||..|++.|++|+|+|++ .+||.|..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~ 43 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLN 43 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcC
Confidence 589999999999999999999999999999998 78888754
No 165
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.71 E-value=4e-08 Score=95.81 Aligned_cols=45 Identities=11% Similarity=0.155 Sum_probs=38.0
Q ss_pred HHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 247 AREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 247 ~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
+++.|++++++++|++|..++ . .|++++|+++.+|+||+|+|...
T Consensus 72 ~~~~~i~~~~~~~V~~id~~~-~---~v~~~~g~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 72 YEKNNIKVITSEFATSIDPNN-K---LVTLKSGEKIKYEKLIIASGSIA 116 (385)
T ss_dssp HHHTTCEEECSCCEEEEETTT-T---EEEETTSCEEECSEEEECCCEEE
T ss_pred HHHCCCEEEeCCEEEEEECCC-C---EEEECCCCEEECCEEEEecCCCc
Confidence 456799999999999998765 3 37889999999999999999643
No 166
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.68 E-value=8.9e-09 Score=98.35 Aligned_cols=43 Identities=30% Similarity=0.529 Sum_probs=39.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHH--cCCcEEEEccCCCCCceeec
Q 048009 16 KKWDALVIGGGHNGLTAAAYLAR--AGLSVAVLERRHVIGGAAVT 58 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~--~G~~V~v~E~~~~~GG~~~s 58 (531)
..+||+|||||++||+||++|++ .|++|+|||+++.+||.+..
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~ 108 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe
Confidence 45899999999999999999986 49999999999999998753
No 167
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.62 E-value=5.4e-08 Score=99.38 Aligned_cols=52 Identities=23% Similarity=0.391 Sum_probs=40.7
Q ss_pred HHcCcEEEcCcceeEEEec--CCCceeEEEeC--CCc--EEEcC-eEEecCChHhHHhhcC
Q 048009 248 REAGAHIVTRAEVSQLMIN--DSGRVNGVQLA--DGA--QVHSS-IVLSNATPYKTFMDLV 301 (531)
Q Consensus 248 ~~~G~~i~~~~~V~~I~~~--~~g~~~~V~~~--~g~--~~~ad-~VV~aa~~~~~~~~ll 301 (531)
.+.|.+|++++.|++|..+ + ++++||++. +|+ ++.|+ .||+++|...+ .+||
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~-~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~s-p~lL 275 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEAD-RTCKGVTVVTAAGNELNFFADREVILSQGVFET-PKLL 275 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTT-TEEEEEEEEETTSCEEEEEEEEEEEECSHHHHH-HHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCC-CEEEEEEEEeCCCcEEEEEeeeEEEEcccccCC-hHHH
Confidence 3568999999999999998 5 789999885 365 46674 59999998875 4443
No 168
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.60 E-value=2.8e-07 Score=94.23 Aligned_cols=51 Identities=18% Similarity=0.294 Sum_probs=41.2
Q ss_pred HcCcEEEcCcceeEEEecCCCceeEEEeCCC---cEEEcCeEEecCChHhHHhhcC
Q 048009 249 EAGAHIVTRAEVSQLMINDSGRVNGVQLADG---AQVHSSIVLSNATPYKTFMDLV 301 (531)
Q Consensus 249 ~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g---~~~~ad~VV~aa~~~~~~~~ll 301 (531)
..+.+|++++.|++|..++ +++++|...+. ..+.++.||++||...+ .+||
T Consensus 223 r~nl~v~~~~~v~~i~~~~-~~a~gv~~~~~~~~~~~~a~~VILsAGai~S-P~LL 276 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEG-NQVRSLEVVGRQGSAEVFADQIVLCAGALES-PALL 276 (526)
T ss_dssp CTTEEEECSCEEEEEEEET-TEEEEEEEEETTEEEEEEEEEEEECSHHHHH-HHHH
T ss_pred CCCeEEEeCCEEEEEEecC-CeEEEEEEEecCceEEEeecceEEcccccCC-cchh
Confidence 3468999999999999998 88888887532 25778999999999886 4554
No 169
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.56 E-value=8.3e-08 Score=96.95 Aligned_cols=40 Identities=40% Similarity=0.585 Sum_probs=37.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceee
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAV 57 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~ 57 (531)
++||+|||||++||+||+.|+++ ++|+|||+++.+||.+.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~ 147 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW 147 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee
Confidence 47999999999999999999999 99999999999887754
No 170
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.55 E-value=1.5e-07 Score=94.00 Aligned_cols=38 Identities=29% Similarity=0.476 Sum_probs=34.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHc--CCcEEEEccCCCCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARA--GLSVAVLERRHVIG 53 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~--G~~V~v~E~~~~~G 53 (531)
.++||+|||||++||+||..|++. |++|+|+|+++.++
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~ 41 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVS 41 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccc
Confidence 358999999999999999999998 78999999987654
No 171
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.53 E-value=4.5e-07 Score=91.76 Aligned_cols=59 Identities=19% Similarity=0.134 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHcC-cEEEcCcceeEEEecCCC-ceeEEEeC--CC-----cEEEcCeEEecCChHhH
Q 048009 238 SVSMAIGSAAREAG-AHIVTRAEVSQLMINDSG-RVNGVQLA--DG-----AQVHSSIVLSNATPYKT 296 (531)
Q Consensus 238 ~l~~~l~~~~~~~G-~~i~~~~~V~~I~~~~~g-~~~~V~~~--~g-----~~~~ad~VV~aa~~~~~ 296 (531)
....++...++++| ++|++++.|++|..++++ ++++|++. +| .++.|+.||+|+|...+
T Consensus 227 s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~s 294 (507)
T 1coy_A 227 SLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGT 294 (507)
T ss_dssp CTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHH
T ss_pred ChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCC
Confidence 34455555556665 999999999999987534 68899885 56 26789999999999865
No 172
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.52 E-value=3.6e-07 Score=92.48 Aligned_cols=59 Identities=20% Similarity=0.223 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHcC-cEEEcCcceeEEEecCCC-ceeEEEeC--CC-----cEEEcCeEEecCChHhH
Q 048009 238 SVSMAIGSAAREAG-AHIVTRAEVSQLMINDSG-RVNGVQLA--DG-----AQVHSSIVLSNATPYKT 296 (531)
Q Consensus 238 ~l~~~l~~~~~~~G-~~i~~~~~V~~I~~~~~g-~~~~V~~~--~g-----~~~~ad~VV~aa~~~~~ 296 (531)
....++.+.++++| ++|++++.|++|..++++ ++++|++. +| .++.|+.||+|+|...+
T Consensus 222 s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s 289 (504)
T 1n4w_A 222 SLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGS 289 (504)
T ss_dssp CTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHH
T ss_pred CHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCC
Confidence 34445555566675 999999999999987533 78899884 56 36889999999999865
No 173
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.51 E-value=2e-07 Score=96.63 Aligned_cols=39 Identities=28% Similarity=0.340 Sum_probs=35.3
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHc--CCcEEEEccCCCCC
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARA--GLSVAVLERRHVIG 53 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~--G~~V~v~E~~~~~G 53 (531)
+.++||+|||||++||+||..|+++ |++|+|||+++.+|
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~ 74 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS 74 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 4568999999999999999999998 89999999988654
No 174
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.47 E-value=3.8e-07 Score=90.47 Aligned_cols=45 Identities=11% Similarity=0.132 Sum_probs=37.4
Q ss_pred HHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 247 AREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 247 ~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
+++.|++++++++|+.|..++ . .|++.+|+++.+|+||+|+|...
T Consensus 70 ~~~~gv~~~~~~~v~~i~~~~-~---~v~~~~g~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 70 YAAQNIQLLGGTQVTAINRDR-Q---QVILSDGRALDYDRLVLATGGRP 114 (431)
T ss_dssp HHHTTEEEECSCCEEEEETTT-T---EEEETTSCEEECSEEEECCCEEE
T ss_pred HHhCCCEEEeCCEEEEEECCC-C---EEEECCCCEEECCEEEEcCCCCc
Confidence 456799999999999998765 3 37788898899999999999754
No 175
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.47 E-value=2.4e-07 Score=91.40 Aligned_cols=44 Identities=20% Similarity=0.323 Sum_probs=36.9
Q ss_pred HHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 248 REAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 248 ~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
++.|++++++++|+.|..+. . .|.+.+|+++.+|++|+|+|...
T Consensus 68 ~~~~i~~~~~~~v~~id~~~-~---~v~~~~g~~~~~d~lvlAtG~~p 111 (410)
T 3ef6_A 68 GEARIDMLTGPEVTALDVQT-R---TISLDDGTTLSADAIVIATGSRA 111 (410)
T ss_dssp HHTTCEEEESCCEEEEETTT-T---EEEETTSCEEECSEEEECCCEEE
T ss_pred HHCCCEEEeCCEEEEEECCC-C---EEEECCCCEEECCEEEEccCCcc
Confidence 46789999999999998765 3 37788998999999999999653
No 176
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.46 E-value=1.2e-06 Score=88.29 Aligned_cols=56 Identities=11% Similarity=0.086 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCc----EEEcCeEEecCCh
Q 048009 236 MGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGA----QVHSSIVLSNATP 293 (531)
Q Consensus 236 ~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~----~~~ad~VV~aa~~ 293 (531)
...+.+.+.+.++++|++|+++++|++|..+ +.+..+...||+ ++.||.||+|+|.
T Consensus 271 ~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~--~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 271 EKKLSSYAQSHLENTSIKVHLRTAVAKVEEK--QLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEECSS--EEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred CHHHHHHHHHHHHhcceeeecCceEEEEeCC--ceEEEEEecCcccceeeeccCEEEEccCC
Confidence 4678888999999999999999999998643 333345556764 6899999999884
No 177
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.44 E-value=1.3e-07 Score=93.37 Aligned_cols=34 Identities=35% Similarity=0.475 Sum_probs=32.1
Q ss_pred CcEEEECCChhHHHHHHHHHH---cCCcEEEEccCCC
Q 048009 18 WDALVIGGGHNGLTAAAYLAR---AGLSVAVLERRHV 51 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~---~G~~V~v~E~~~~ 51 (531)
.||+|||||++||+||..|++ .|++|+|+|+++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 589999999999999999999 8999999999874
No 178
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.44 E-value=1.4e-06 Score=88.88 Aligned_cols=61 Identities=20% Similarity=0.305 Sum_probs=44.6
Q ss_pred HHHHHHHH-HHcCcEEEcCcceeEEEecCCCceeEEEeCC---Cc--EEEcC-eEEecCChHhHHhhcC
Q 048009 240 SMAIGSAA-REAGAHIVTRAEVSQLMINDSGRVNGVQLAD---GA--QVHSS-IVLSNATPYKTFMDLV 301 (531)
Q Consensus 240 ~~~l~~~~-~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~---g~--~~~ad-~VV~aa~~~~~~~~ll 301 (531)
..++.+.+ ++.|++|++++.|++|..++++++++|++.+ |+ ++.|+ .||+|+|...+ .+|+
T Consensus 211 ~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~s-p~lL 278 (546)
T 2jbv_A 211 SVSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDT-PKLL 278 (546)
T ss_dssp HHHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHH-HHHH
T ss_pred HHHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCC-chhh
Confidence 33443333 3568999999999999987546788998754 54 68898 89999998753 4443
No 179
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.43 E-value=5.6e-07 Score=94.05 Aligned_cols=37 Identities=32% Similarity=0.576 Sum_probs=34.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHH-----cCCcEEEEccCCCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLAR-----AGLSVAVLERRHVI 52 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~-----~G~~V~v~E~~~~~ 52 (531)
.++||+|||||++||++|..|++ .|++|+||||.+.+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 35899999999999999999999 99999999998653
No 180
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.42 E-value=8.6e-07 Score=90.30 Aligned_cols=36 Identities=36% Similarity=0.468 Sum_probs=33.5
Q ss_pred CCcEEEECCChhHHHHHHHHHH-cCCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLAR-AGLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~-~G~~V~v~E~~~~~ 52 (531)
+||+||||||.+|+++|.+|++ .|.+|+|+|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999999 68999999998765
No 181
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.42 E-value=1.9e-07 Score=90.64 Aligned_cols=39 Identities=36% Similarity=0.449 Sum_probs=35.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCc
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGG 54 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG 54 (531)
.++||+|||||++|+++|++|+++|++|+|+|+....+|
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 468999999999999999999999999999999875544
No 182
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.39 E-value=2.9e-06 Score=84.07 Aligned_cols=52 Identities=23% Similarity=0.355 Sum_probs=43.5
Q ss_pred HHHHHHHcCcEEEcCcceeEEEe--cCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 243 IGSAAREAGAHIVTRAEVSQLMI--NDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 243 l~~~~~~~G~~i~~~~~V~~I~~--~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
+.+.+++.|++++++++|++|.. ++ +++..|++.+|+++.+|.||+++|...
T Consensus 197 l~~~l~~~GV~i~~~~~v~~i~~~~~~-~~v~~v~~~~G~~i~~D~Vv~a~G~~p 250 (431)
T 1q1r_A 197 YEHLHREAGVDIRTGTQVCGFEMSTDQ-QKVTAVLCEDGTRLPADLVIAGIGLIP 250 (431)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECTTT-CCEEEEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHHHhCCeEEEeCCEEEEEEeccCC-CcEEEEEeCCCCEEEcCEEEECCCCCc
Confidence 44556778999999999999987 55 777779999999999999999998553
No 183
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.37 E-value=6.5e-07 Score=92.39 Aligned_cols=36 Identities=31% Similarity=0.415 Sum_probs=33.1
Q ss_pred CcEEEECCChhHHHHHHHHHHc--CCcEEEEccCCCCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARA--GLSVAVLERRHVIG 53 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~--G~~V~v~E~~~~~G 53 (531)
.||+|||||++||+||..|+++ |++|+|+|+++.++
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 6899999999999999999998 89999999987643
No 184
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.36 E-value=3.5e-07 Score=91.03 Aligned_cols=43 Identities=40% Similarity=0.503 Sum_probs=39.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceee
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAV 57 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~ 57 (531)
...+||+|||||++||+||+.|+++|++|+|||+.+.+||...
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 3568999999999999999999999999999999999998753
No 185
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.35 E-value=6.4e-07 Score=89.12 Aligned_cols=34 Identities=21% Similarity=0.448 Sum_probs=32.1
Q ss_pred CCcEEEECCChhHHHHHHHHHH---cCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLAR---AGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~---~G~~V~v~E~~~ 50 (531)
+.||+|||||++|++||..|++ .|++|+|+|+++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 4799999999999999999999 899999999976
No 186
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.35 E-value=3.1e-06 Score=82.66 Aligned_cols=52 Identities=15% Similarity=0.172 Sum_probs=42.3
Q ss_pred HHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 242 AIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 242 ~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
.+.+.+++.|++|+++++|++|..++ +. ..|++.+|+++.+|.||+|+|...
T Consensus 192 ~l~~~l~~~gv~i~~~~~v~~i~~~~-~~-~~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 192 AVQAGLEGLGVRFHLGPVLASLKKAG-EG-LEAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp HHHHHHHTTTCEEEESCCEEEEEEET-TE-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEecC-CE-EEEEECCCCEEECCEEEECcCCCc
Confidence 34555677899999999999998765 44 458888998899999999998654
No 187
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.35 E-value=2.8e-07 Score=87.36 Aligned_cols=42 Identities=38% Similarity=0.670 Sum_probs=38.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEE-EccCCCCCceeec
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAV-LERRHVIGGAAVT 58 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v-~E~~~~~GG~~~s 58 (531)
.++||+|||||++||+||..|+++|++|+| +|+ +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 468999999999999999999999999999 999 778988754
No 188
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.31 E-value=3.7e-06 Score=82.79 Aligned_cols=53 Identities=15% Similarity=0.129 Sum_probs=43.6
Q ss_pred HHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 241 MAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 241 ~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
+.+.+.++++|++|+++++|++|..+ +++.+|+++||+++.||.||+++|...
T Consensus 189 ~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 189 AWLRGLLTELGVQVELGTGVVGFSGE--GQLEQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp HHHHHHHHHHTCEEECSCCEEEEECS--SSCCEEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEecc--CcEEEEEECCCCEEEcCEEEEeeCCee
Confidence 33455567889999999999999864 455679999999999999999998654
No 189
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.28 E-value=2.9e-07 Score=88.88 Aligned_cols=50 Identities=8% Similarity=0.060 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHhHHhhcCC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYKTFMDLVP 302 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~~~~~ll~ 302 (531)
..+..+|.+.++++|++|+. ++|++|...+ .+.||.||+|+|.+. ..|++
T Consensus 142 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-------------~~~a~~VV~A~G~~s--~~l~~ 191 (351)
T 3g3e_A 142 KNYLQWLTERLTERGVKFFQ-RKVESFEEVA-------------REGADVIVNCTGVWA--GALQR 191 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-------------HTTCSEEEECCGGGG--GGTSC
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-------------cCCCCEEEECCCcCh--HhhcC
Confidence 47899999999999999998 8998875432 157999999999998 56654
No 190
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.27 E-value=6.2e-07 Score=88.96 Aligned_cols=43 Identities=7% Similarity=0.149 Sum_probs=35.1
Q ss_pred HHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 248 REAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 248 ~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
++.|++++.+ +|++|+.++ . .|++++|+++.+|++|+|+|...
T Consensus 67 ~~~gv~~i~~-~v~~Id~~~-~---~V~~~~g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 67 PKFNIEFINE-KAESIDPDA-N---TVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp GGGTEEEECS-CEEEEETTT-T---EEEETTCCEEECSEEEECCCCEE
T ss_pred HHCCcEEEEe-EEEEEECCC-C---EEEECCCCEEECCEEEEeCCCCc
Confidence 4568898766 899998765 3 37899999999999999999753
No 191
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.20 E-value=1.1e-05 Score=79.33 Aligned_cols=47 Identities=19% Similarity=0.303 Sum_probs=39.0
Q ss_pred HHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 243 IGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 243 l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
+.+.+++.|++|+++++|++|. + + .|++.+|+++.+|.||+++|...
T Consensus 193 l~~~l~~~GV~i~~~~~v~~i~--~-~---~v~~~~g~~i~~D~vi~a~G~~p 239 (408)
T 2gqw_A 193 VARYHAAQGVDLRFERSVTGSV--D-G---VVLLDDGTRIAADMVVVGIGVLA 239 (408)
T ss_dssp HHHHHHHTTCEEEESCCEEEEE--T-T---EEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHcCcEEEeCCEEEEEE--C-C---EEEECCCCEEEcCEEEECcCCCc
Confidence 4455678899999999999998 4 4 47888998999999999988553
No 192
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.20 E-value=9.1e-07 Score=93.64 Aligned_cols=45 Identities=29% Similarity=0.442 Sum_probs=41.0
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeecc
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVTE 59 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s~ 59 (531)
...+||+|||||++||+||..|+++|++|+|||+++.+||.+...
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~ 431 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQV 431 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeec
Confidence 346899999999999999999999999999999999999987653
No 193
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.18 E-value=1e-05 Score=80.79 Aligned_cols=52 Identities=17% Similarity=0.219 Sum_probs=41.8
Q ss_pred HHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 242 AIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 242 ~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
.+.+.+++.|++|+++++|++|..++ +++..|.+ +|+++.+|.||+++|...
T Consensus 196 ~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~v~~v~~-~g~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 196 ILAKDYEAHGVNLVLGSKVAAFEEVD-DEIITKTL-DGKEIKSDIAILCIGFRP 247 (452)
T ss_dssp HHHHHHHHTTCEEEESSCEEEEEEET-TEEEEEET-TSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHCCCEEEcCCeeEEEEcCC-CeEEEEEe-CCCEEECCEEEECcCCCC
Confidence 34555678899999999999998755 66665665 778899999999998654
No 194
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.17 E-value=1.3e-06 Score=85.35 Aligned_cols=35 Identities=31% Similarity=0.448 Sum_probs=33.2
Q ss_pred CcEEEECCChhHHHHHHHHHHc--CCcEEEEccCCCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARA--GLSVAVLERRHVI 52 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~--G~~V~v~E~~~~~ 52 (531)
+||+|||||++||++|+.|+++ |++|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998876
No 195
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.16 E-value=9e-07 Score=87.80 Aligned_cols=34 Identities=26% Similarity=0.450 Sum_probs=32.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++||+|||||++||++|+.|+++|++|+|+|+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4799999999999999999999999999999976
No 196
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.14 E-value=1.5e-05 Score=79.56 Aligned_cols=51 Identities=18% Similarity=0.181 Sum_probs=39.2
Q ss_pred HHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 242 AIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 242 ~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
.+.+.+++.|++|+++++|++|..+ +++..|.+ +|+++.+|.||+|+|...
T Consensus 196 ~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~-~~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 196 VLTEEMEANNITIATGETVERYEGD--GRVQKVVT-DKNAYDADLVVVAVGVRP 246 (447)
T ss_dssp HHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEE-SSCEEECSEEEECSCEEE
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEE-CCCEEECCEEEECcCCCC
Confidence 3455567889999999999999864 44545666 456799999999998654
No 197
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.14 E-value=2.1e-06 Score=81.16 Aligned_cols=41 Identities=32% Similarity=0.262 Sum_probs=36.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceee
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAV 57 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~ 57 (531)
++||+|||||++|+.||+.|+++|++|+|+|+++..+...+
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h 41 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAH 41 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSC
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccc
Confidence 37999999999999999999999999999999986655443
No 198
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.13 E-value=1.5e-06 Score=89.91 Aligned_cols=41 Identities=32% Similarity=0.516 Sum_probs=38.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceee
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAV 57 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~ 57 (531)
.+||+|||||++|++||+.|+++|++|+|+|+.+..||.+.
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~ 86 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKI 86 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSST
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCccc
Confidence 58999999999999999999999999999999999988553
No 199
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.13 E-value=5.1e-06 Score=83.93 Aligned_cols=40 Identities=20% Similarity=0.087 Sum_probs=30.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCce
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGA 55 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~ 55 (531)
..+||||||+|++||++|+.|.++|...+++|+.+..|+.
T Consensus 38 ~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~ 77 (501)
T 4b63_A 38 ELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQP 77 (501)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCC
T ss_pred CcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCc
Confidence 3589999999999999999999988777777777666654
No 200
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.11 E-value=1.4e-05 Score=80.38 Aligned_cols=35 Identities=31% Similarity=0.411 Sum_probs=32.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 217 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQ 217 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 46899999999999999999999999999999764
No 201
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.10 E-value=1.8e-05 Score=79.85 Aligned_cols=50 Identities=14% Similarity=0.210 Sum_probs=39.8
Q ss_pred HHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 243 IGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 243 l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
+.+.+++.|++|+++++|++|.. + +++..|.+ +|+++.+|.||+++|...
T Consensus 242 l~~~l~~~GV~i~~~~~v~~i~~-~-~~v~~v~~-~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 242 MAKNMEEHGIQLAFGETVKEVAG-N-GKVEKIIT-DKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp HHHHHHTTTCEEEETCCEEEEEC-S-SSCCEEEE-SSCEEECSEEEECCCEEE
T ss_pred HHHHHHhCCeEEEeCCEEEEEEc-C-CcEEEEEE-CCcEEECCEEEECCCCCc
Confidence 45556788999999999999986 4 55555666 677899999999988654
No 202
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.09 E-value=1.3e-05 Score=80.03 Aligned_cols=35 Identities=31% Similarity=0.399 Sum_probs=32.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 204 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE 204 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 46899999999999999999999999999999754
No 203
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.05 E-value=1.8e-06 Score=85.96 Aligned_cols=42 Identities=26% Similarity=0.340 Sum_probs=39.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHH-c------CCcEEEEccCCCCCceee
Q 048009 16 KKWDALVIGGGHNGLTAAAYLAR-A------GLSVAVLERRHVIGGAAV 57 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~-~------G~~V~v~E~~~~~GG~~~ 57 (531)
..+||+|||||++|++||..|++ + |++|+|||+.+.+||.+.
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 46899999999999999999999 7 999999999999999874
No 204
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.04 E-value=1.5e-05 Score=80.28 Aligned_cols=51 Identities=10% Similarity=-0.033 Sum_probs=40.0
Q ss_pred HHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCC----CcEEEcCeEEecCChHh
Q 048009 243 IGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLAD----GAQVHSSIVLSNATPYK 295 (531)
Q Consensus 243 l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~----g~~~~ad~VV~aa~~~~ 295 (531)
+.+.+++.|++|+++++|++|..++ +. ..|++.+ |+++.+|.||+++|...
T Consensus 232 l~~~l~~~gV~i~~~~~v~~i~~~~-~~-~~v~~~~~~~~g~~~~~D~vv~a~G~~p 286 (482)
T 1ojt_A 232 WQKQNEYRFDNIMVNTKTVAVEPKE-DG-VYVTFEGANAPKEPQRYDAVLVAAGRAP 286 (482)
T ss_dssp HHHHHGGGEEEEECSCEEEEEEEET-TE-EEEEEESSSCCSSCEEESCEEECCCEEE
T ss_pred HHHHHHhcCCEEEECCEEEEEEEcC-Ce-EEEEEeccCCCceEEEcCEEEECcCCCc
Confidence 3445667899999999999998765 43 3477766 77799999999998654
No 205
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.03 E-value=3.3e-05 Score=77.39 Aligned_cols=51 Identities=22% Similarity=0.297 Sum_probs=39.1
Q ss_pred HHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeC-CC--cEEEcCeEEecCChHh
Q 048009 243 IGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLA-DG--AQVHSSIVLSNATPYK 295 (531)
Q Consensus 243 l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~-~g--~~~~ad~VV~aa~~~~ 295 (531)
+.+.++++|++++++++|++|..++ +++ .|++. +| +++.+|.||+++|...
T Consensus 218 l~~~l~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~~~g~~~~~~~D~vv~a~G~~p 271 (464)
T 2a8x_A 218 IEKQFKKLGVTILTATKVESIADGG-SQV-TVTVTKDGVAQELKAEKVLQAIGFAP 271 (464)
T ss_dssp HHHHHHHHTCEEECSCEEEEEEECS-SCE-EEEEESSSCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHcCCEEEeCcEEEEEEEcC-CeE-EEEEEcCCceEEEEcCEEEECCCCCc
Confidence 3445667899999999999998765 544 36664 66 5799999999988654
No 206
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.02 E-value=3e-06 Score=88.99 Aligned_cols=43 Identities=30% Similarity=0.421 Sum_probs=39.7
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceeec
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAVT 58 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~s 58 (531)
..+||+|||||++|++||..|+++|++|+|+|+++.+||.+..
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~ 414 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNI 414 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeec
Confidence 4689999999999999999999999999999999999988653
No 207
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.02 E-value=2e-05 Score=76.13 Aligned_cols=34 Identities=41% Similarity=0.655 Sum_probs=32.0
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 6899999999999999999999999999999764
No 208
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.98 E-value=4.8e-05 Score=78.32 Aligned_cols=35 Identities=31% Similarity=0.423 Sum_probs=32.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 35899999999999999999999999999999653
No 209
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.98 E-value=3.9e-06 Score=91.49 Aligned_cols=41 Identities=39% Similarity=0.614 Sum_probs=39.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCceee
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGGAAV 57 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG~~~ 57 (531)
++||+|||||++||+||..|+++|++|+|||+++.+||++.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 58999999999999999999999999999999999999987
No 210
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.98 E-value=4.6e-05 Score=76.83 Aligned_cols=51 Identities=18% Similarity=0.324 Sum_probs=42.2
Q ss_pred HHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 243 IGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 243 l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
+.+.++++|++|+++++|++|..++ +++ .|++.+|+++.||.||+++|...
T Consensus 232 ~~~~l~~~GV~v~~~~~V~~i~~~~-~~~-~v~l~dG~~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 232 TMEKVRREGVKVMPNAIVQSVGVSS-GKL-LIKLKDGRKVETDHIVAAVGLEP 282 (493)
T ss_dssp HHHHHHTTTCEEECSCCEEEEEEET-TEE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHhcCCEEEeCCEEEEEEecC-CeE-EEEECCCCEEECCEEEECCCCCc
Confidence 3455678899999999999998765 554 58899999999999999988654
No 211
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.96 E-value=4.3e-06 Score=86.74 Aligned_cols=44 Identities=39% Similarity=0.613 Sum_probs=37.5
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccC-C-------CCCceeec
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERR-H-------VIGGAAVT 58 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~-~-------~~GG~~~s 58 (531)
..++||+|||||++||+||..|+++|++|+|+|+. + .+||.|..
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~ 156 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVN 156 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHH
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEec
Confidence 34699999999999999999999999999999983 3 36776654
No 212
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.96 E-value=5.9e-05 Score=71.42 Aligned_cols=50 Identities=12% Similarity=0.135 Sum_probs=40.0
Q ss_pred HHHHHcCcEEEcCcceeEEEecCCCceeEEEeCC----C--cEEEcCeEEecCChHh
Q 048009 245 SAAREAGAHIVTRAEVSQLMINDSGRVNGVQLAD----G--AQVHSSIVLSNATPYK 295 (531)
Q Consensus 245 ~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~----g--~~~~ad~VV~aa~~~~ 295 (531)
+.+++.|++|+++++|++|..++ +++.+|++.+ | +++.+|.||+++|...
T Consensus 192 ~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 192 DKVENGNIILHTNRTLEEVTGDQ-MGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp HHHHTSSEEEECSCEEEEEEECS-SSEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred HhcccCCeEEEcCceeEEEEcCC-CceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 34567899999999999999876 6777787765 4 4789999999988543
No 213
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.94 E-value=5.8e-06 Score=90.80 Aligned_cols=42 Identities=24% Similarity=0.578 Sum_probs=38.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCC-cEEEEccCCCCCceee
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGL-SVAVLERRHVIGGAAV 57 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~~~GG~~~ 57 (531)
..+||+|||||++||+||..|+++|+ +|+|||+.+.+||.+.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~ 228 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLST 228 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccc
Confidence 35899999999999999999999999 7999999999999863
No 214
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.94 E-value=5.2e-06 Score=82.80 Aligned_cols=42 Identities=24% Similarity=0.274 Sum_probs=38.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcC--CcEEEEccCCCCCceee
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAG--LSVAVLERRHVIGGAAV 57 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G--~~V~v~E~~~~~GG~~~ 57 (531)
..+||+|||||++|++||..|+++| ++|+|||+.+.+||+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 4589999999999999999999998 99999999999998763
No 215
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.93 E-value=3.4e-05 Score=77.42 Aligned_cols=35 Identities=31% Similarity=0.370 Sum_probs=32.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 211 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE 211 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCc
Confidence 46899999999999999999999999999999764
No 216
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.91 E-value=5.2e-05 Score=76.23 Aligned_cols=50 Identities=24% Similarity=0.258 Sum_probs=39.1
Q ss_pred HHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 243 IGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 243 l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
+.+.+++.|++|+++++|++|..+ +++..|.+.++ ++.+|.||+++|...
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~~~-~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 233 IYKEADKHHIEILTNENVKAFKGN--ERVEAVETDKG-TYKADLVLVSVGVKP 282 (480)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEES--SBEEEEEETTE-EEECSEEEECSCEEE
T ss_pred HHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEECCC-EEEcCEEEECcCCCc
Confidence 445567889999999999999864 45655766544 699999999998664
No 217
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.90 E-value=7.4e-05 Score=77.27 Aligned_cols=48 Identities=15% Similarity=0.224 Sum_probs=39.8
Q ss_pred HHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChH
Q 048009 243 IGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPY 294 (531)
Q Consensus 243 l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~ 294 (531)
+.+.+++.|++|+++++|++|..++ + +|++.+|+++.+|.||+|+|..
T Consensus 234 l~~~l~~~GV~i~~~~~v~~i~~~~-~---~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 234 VHEHMKNHDVELVFEDGVDALEENG-A---VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEGGG-T---EEEETTSCEEECSEEEECSCEE
T ss_pred HHHHHHHcCCEEEECCeEEEEecCC-C---EEEECCCCEEEcCEEEEccCCC
Confidence 4455678899999999999998754 3 3778899999999999999854
No 218
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.89 E-value=3.8e-05 Score=76.15 Aligned_cols=47 Identities=11% Similarity=0.124 Sum_probs=38.0
Q ss_pred HHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 243 IGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 243 l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
+.+.++++|++++++++|+++..+ .|++++|+++.+|.||+++|...
T Consensus 194 ~~~~l~~~gV~i~~~~~v~~~~~~------~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 194 ILDELDKREIPYRLNEEINAINGN------EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp HHHHHHHTTCCEEESCCEEEEETT------EEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHhhccceEEEeccEEEEecCC------eeeecCCeEEeeeeEEEEeceec
Confidence 345567889999999999988632 27789999999999999988543
No 219
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.87 E-value=1e-05 Score=81.57 Aligned_cols=37 Identities=16% Similarity=0.267 Sum_probs=34.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcC---CcEEEEccCCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAG---LSVAVLERRHVIG 53 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G---~~V~v~E~~~~~G 53 (531)
++||+|||||++|++||..|++.| ++|+|+|+++.++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~ 74 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNIS 74 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCC
Confidence 589999999999999999999988 9999999987654
No 220
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.87 E-value=6.8e-06 Score=81.52 Aligned_cols=38 Identities=29% Similarity=0.490 Sum_probs=35.1
Q ss_pred CcEEEECCChhHHHHHHHHHH--cCCcEEEEccCCCCCce
Q 048009 18 WDALVIGGGHNGLTAAAYLAR--AGLSVAVLERRHVIGGA 55 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~--~G~~V~v~E~~~~~GG~ 55 (531)
.||+|||||++||+||..|++ .|++|+|+|+++..++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~ 42 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT 42 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC
Confidence 699999999999999999999 78999999999887654
No 221
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.86 E-value=9.3e-05 Score=75.24 Aligned_cols=35 Identities=26% Similarity=0.216 Sum_probs=33.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||+|..|+-+|..|++.|.+|+|+++++.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 46899999999999999999999999999999876
No 222
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.83 E-value=1.4e-05 Score=78.60 Aligned_cols=37 Identities=24% Similarity=0.315 Sum_probs=33.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCc--EEEEccCCCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLS--VAVLERRHVI 52 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~--V~v~E~~~~~ 52 (531)
.++||+|||||++|++||..|+++|++ |+|+|+++.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 468999999999999999999999984 9999998754
No 223
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.82 E-value=1.2e-05 Score=82.46 Aligned_cols=73 Identities=23% Similarity=0.276 Sum_probs=50.8
Q ss_pred HHHHHHHHHH-cCcEEEcCcceeEEEecCCCceeEEEeCC---Cc--EE---EcCeEEecCChHhHHhhcCC-CCCCChH
Q 048009 240 SMAIGSAARE-AGAHIVTRAEVSQLMINDSGRVNGVQLAD---GA--QV---HSSIVLSNATPYKTFMDLVP-GNILPDD 309 (531)
Q Consensus 240 ~~~l~~~~~~-~G~~i~~~~~V~~I~~~~~g~~~~V~~~~---g~--~~---~ad~VV~aa~~~~~~~~ll~-~~~~~~~ 309 (531)
..++.+.+.+ .|++|++++.|++|..++ +++++|++.+ |+ ++ .++.||+|+|.+.+ .+|+- ...-|++
T Consensus 198 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~-~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~s-p~lL~~sGig~~~ 275 (546)
T 1kdg_A 198 VATYLQTALARPNFTFKTNVMVSNVVRNG-SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGT-SRILFQSGIGPTD 275 (546)
T ss_dssp HHTHHHHHHTCTTEEEECSCCEEEEEEET-TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHH-HHHHHHTTBSCHH
T ss_pred HHHHHHHHhhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcC-HHHHHHcCCCcHH
Confidence 3445555555 589999999999999987 8899999875 64 33 78999999999875 34432 2223444
Q ss_pred HHHHh
Q 048009 310 FILSI 314 (531)
Q Consensus 310 ~~~~i 314 (531)
..+.+
T Consensus 276 ~L~~~ 280 (546)
T 1kdg_A 276 MIQTV 280 (546)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 44443
No 224
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.82 E-value=1.2e-05 Score=80.33 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=33.3
Q ss_pred CcEEEECCChhHHHHHHHHHHc--CCcEEEEccCCCCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARA--GLSVAVLERRHVIG 53 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~--G~~V~v~E~~~~~G 53 (531)
+||+|||||++|++||..|++. |++|+|+|+++.++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNIS 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC
Confidence 5899999999999999999998 99999999987653
No 225
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.82 E-value=0.00019 Score=72.97 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=33.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||+|.+|+-.|..|++.+.+|+|+++++.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 46899999999999999999999999999999886
No 226
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.81 E-value=6.4e-06 Score=83.83 Aligned_cols=37 Identities=35% Similarity=0.543 Sum_probs=33.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIG 53 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~G 53 (531)
.+||+||||||.+|+++|.+|++ |.+|+|+|+.+..+
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~ 61 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPT 61 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcC
Confidence 45999999999999999999999 99999999987653
No 227
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.77 E-value=1.5e-05 Score=79.50 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=33.2
Q ss_pred CcEEEECCChhHHHHHHHHHHc--CCcEEEEccCCCCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARA--GLSVAVLERRHVIG 53 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~--G~~V~v~E~~~~~G 53 (531)
+||+|||||++|++||..|++. |++|+|+|+++.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 4899999999999999999998 99999999988654
No 228
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.75 E-value=1.8e-05 Score=79.63 Aligned_cols=37 Identities=27% Similarity=0.513 Sum_probs=33.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHc--CCcEEEEccCCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARA--GLSVAVLERRHVIG 53 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~--G~~V~v~E~~~~~G 53 (531)
++||+|||||++|++||..|++. |.+|+|+|+++..+
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 74 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYS 74 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC
Confidence 47999999999999999999997 89999999987654
No 229
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.74 E-value=1.5e-05 Score=80.29 Aligned_cols=38 Identities=24% Similarity=0.364 Sum_probs=34.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHHc--CCcEEEEccCCCCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARA--GLSVAVLERRHVIG 53 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~--G~~V~v~E~~~~~G 53 (531)
.++||+|||||++|++||..|+++ |.+|+|+|+++.++
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 468999999999999999999987 89999999987654
No 230
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.71 E-value=2.5e-05 Score=76.21 Aligned_cols=34 Identities=15% Similarity=0.245 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHcC--CcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAG--LSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G--~~V~v~E~~~ 50 (531)
++||+|||||++|++||..|+++| .+|+|+|+++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 589999999999999999999998 5699999875
No 231
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.69 E-value=0.00024 Score=67.60 Aligned_cols=48 Identities=19% Similarity=0.094 Sum_probs=37.8
Q ss_pred HHHHcCcEEEcCcceeEEEecCCCceeEEEeC---CC--cEEEcCeEEecCChHh
Q 048009 246 AAREAGAHIVTRAEVSQLMINDSGRVNGVQLA---DG--AQVHSSIVLSNATPYK 295 (531)
Q Consensus 246 ~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~---~g--~~~~ad~VV~aa~~~~ 295 (531)
.+++.|++++++++|++|..+ +++.+|++. +| +++.+|.||+++|...
T Consensus 200 ~l~~~gv~v~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2zbw_A 200 AHEEGRLEVLTPYELRRVEGD--ERVRWAVVFHNQTQEELALEVDAVLILAGYIT 252 (335)
T ss_dssp HHHTTSSEEETTEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred ccccCCeEEecCCcceeEccC--CCeeEEEEEECCCCceEEEecCEEEEeecCCC
Confidence 345679999999999999874 555567775 67 5789999999988654
No 232
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.68 E-value=2.4e-05 Score=75.69 Aligned_cols=52 Identities=15% Similarity=0.207 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
..+.+.+.+.+++.|++++++++|++|. . . +|++++|+ +.+|.||+++|...
T Consensus 183 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~-~---~v~~~~g~-i~~D~vi~a~G~~p 234 (367)
T 1xhc_A 183 EELSNMIKDMLEETGVKFFLNSELLEAN--E-E---GVLTNSGF-IEGKVKICAIGIVP 234 (367)
T ss_dssp HHHHHHHHHHHHHTTEEEECSCCEEEEC--S-S---EEEETTEE-EECSCEEEECCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEE--e-e---EEEECCCE-EEcCEEEECcCCCc
Confidence 4678888888999999999999999987 2 2 37788888 99999999988543
No 233
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.67 E-value=3e-05 Score=76.91 Aligned_cols=35 Identities=20% Similarity=0.329 Sum_probs=31.4
Q ss_pred CcEEEECCChhHHHHHHHHHHcC--CcEEEEccCCCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAG--LSVAVLERRHVI 52 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G--~~V~v~E~~~~~ 52 (531)
++|+|||||.+|++||..|++.| .+|+|+|+++..
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 57999999999999999999998 569999998653
No 234
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.64 E-value=0.00018 Score=69.41 Aligned_cols=48 Identities=19% Similarity=0.195 Sum_probs=38.7
Q ss_pred HHHcCcEEEcCcceeEEEecCCCceeEEEeC--CC--cEEEcCeEEecCChHh
Q 048009 247 AREAGAHIVTRAEVSQLMINDSGRVNGVQLA--DG--AQVHSSIVLSNATPYK 295 (531)
Q Consensus 247 ~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~--~g--~~~~ad~VV~aa~~~~ 295 (531)
+++.|++++++++|++|..++ +++.+|++. +| +++.+|.||+++|...
T Consensus 212 ~~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p 263 (360)
T 3ab1_A 212 RANGTIDVYLETEVASIEESN-GVLTRVHLRSSDGSKWTVEADRLLILIGFKS 263 (360)
T ss_dssp HHHTSEEEESSEEEEEEEEET-TEEEEEEEEETTCCEEEEECSEEEECCCBCC
T ss_pred hhcCceEEEcCcCHHHhccCC-CceEEEEEEecCCCeEEEeCCEEEECCCCCC
Confidence 456789999999999999876 776667774 77 4789999999988543
No 235
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.63 E-value=3.6e-05 Score=79.12 Aligned_cols=40 Identities=35% Similarity=0.557 Sum_probs=35.6
Q ss_pred ccCCCCcEEEECCChhHHHHHHHHHH-cCCcEEEEccCCCC
Q 048009 13 LKEKKWDALVIGGGHNGLTAAAYLAR-AGLSVAVLERRHVI 52 (531)
Q Consensus 13 ~~~~~~dvvIIGaGiaGL~aA~~L~~-~G~~V~v~E~~~~~ 52 (531)
+++.++|++|||+|.+|+++|.+|++ .|.+|+|+|+....
T Consensus 20 ~~~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 20 VAGKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TTTCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cCcccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 33457999999999999999999999 79999999998654
No 236
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.56 E-value=0.0007 Score=68.93 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=33.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||+|..|+-+|..|++.|.+|+|+++++.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 46899999999999999999999999999999875
No 237
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.55 E-value=0.00034 Score=66.64 Aligned_cols=45 Identities=7% Similarity=0.011 Sum_probs=37.3
Q ss_pred cCcEEEcCcceeEEEecCCCceeEEEeCC-----CcEEEcCeEEecCChHh
Q 048009 250 AGAHIVTRAEVSQLMINDSGRVNGVQLAD-----GAQVHSSIVLSNATPYK 295 (531)
Q Consensus 250 ~G~~i~~~~~V~~I~~~~~g~~~~V~~~~-----g~~~~ad~VV~aa~~~~ 295 (531)
.|++++++++|++|..++ +++.+|++.+ ++++.+|.||+++|...
T Consensus 222 ~gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 222 EKIEILYNTVALEAKGDG-KLLNALRIKNTKKNEETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp TTEEEECSEEEEEEEESS-SSEEEEEEEETTTTEEEEEECSEEEECSCEEE
T ss_pred CCeEEeecceeEEEEccc-CcEEEEEEEECCCCceEEEEeCEEEEEeCCCC
Confidence 389999999999999887 7777788866 45789999999988543
No 238
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.50 E-value=0.0013 Score=65.62 Aligned_cols=35 Identities=20% Similarity=0.324 Sum_probs=32.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHc--CCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARA--GLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~--G~~V~v~E~~~~ 51 (531)
..+|+|||||.+|+-+|..|++. |.+|+++++++.
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~ 263 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA 263 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC
Confidence 46899999999999999999999 899999999875
No 239
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.50 E-value=0.00064 Score=65.65 Aligned_cols=53 Identities=13% Similarity=0.242 Sum_probs=39.3
Q ss_pred HHHHHHHHHcC-cEEEcCcceeEEEecCCCceeEEEeCCCcEEE-cCeEEecCChHh
Q 048009 241 MAIGSAAREAG-AHIVTRAEVSQLMINDSGRVNGVQLADGAQVH-SSIVLSNATPYK 295 (531)
Q Consensus 241 ~~l~~~~~~~G-~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~-ad~VV~aa~~~~ 295 (531)
+.+.+.+++.| ++++++++|++|..++ +. ..|++.||+++. +|.||+++|...
T Consensus 218 ~~l~~~l~~~g~v~~~~~~~v~~i~~~~-~~-~~v~~~~g~~~~~~d~vi~a~G~~~ 272 (369)
T 3d1c_A 218 QRLGNVIKQGARIEMNVHYTVKDIDFNN-GQ-YHISFDSGQSVHTPHEPILATGFDA 272 (369)
T ss_dssp HHHHHHHHTTCCEEEECSCCEEEEEEET-TE-EEEEESSSCCEEESSCCEECCCBCG
T ss_pred HHHHHHHhhCCcEEEecCcEEEEEEecC-Cc-eEEEecCCeEeccCCceEEeeccCC
Confidence 33445566776 9999999999997654 43 357888987665 599999888554
No 240
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.45 E-value=0.00068 Score=64.00 Aligned_cols=46 Identities=15% Similarity=0.250 Sum_probs=36.9
Q ss_pred HcCcEEEcCcceeEEEecCCCceeEEEeC---CCc--EEEcCeEEecCChHh
Q 048009 249 EAGAHIVTRAEVSQLMINDSGRVNGVQLA---DGA--QVHSSIVLSNATPYK 295 (531)
Q Consensus 249 ~~G~~i~~~~~V~~I~~~~~g~~~~V~~~---~g~--~~~ad~VV~aa~~~~ 295 (531)
+.|++++++++|++|..++ +++.+|++. +|+ ++.+|.||+++|...
T Consensus 202 ~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 202 KRNIPYIMNAQVTEIVGDG-KKVTGVKYKDRTTGEEKLIETDGVFIYVGLIP 252 (319)
T ss_dssp HTTCCEECSEEEEEEEESS-SSEEEEEEEETTTCCEEEECCSEEEECCCEEE
T ss_pred cCCcEEEcCCeEEEEecCC-ceEEEEEEEEcCCCceEEEecCEEEEeeCCcc
Confidence 5689999999999999876 666677775 675 689999999887543
No 241
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.44 E-value=8.1e-05 Score=72.99 Aligned_cols=52 Identities=8% Similarity=0.013 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCC
Q 048009 239 VSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNAT 292 (531)
Q Consensus 239 l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~ 292 (531)
+.+.+.+.+++.|++++++++|+.+..+. .. ..|++.+|+++.+|.||++++
T Consensus 204 ~~~~~~~~l~~~gi~v~~~~~v~~v~~~~-~~-~~v~~~~g~~i~~D~vi~~~g 255 (401)
T 3vrd_B 204 WERLYGFGTENALIEWHPGPDAAVVKTDT-EA-MTVETSFGETFKAAVINLIPP 255 (401)
T ss_dssp HHHHSCTTSTTCSEEEECTTTTCEEEEET-TT-TEEEETTSCEEECSEEEECCC
T ss_pred HHHHHHHHHHhcCcEEEeCceEEEEEecc-cc-eEEEcCCCcEEEeeEEEEecC
Confidence 44444455678899999999999998876 33 348899999999999999765
No 242
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.41 E-value=0.00086 Score=63.02 Aligned_cols=46 Identities=17% Similarity=0.290 Sum_probs=38.2
Q ss_pred HHcCcEEEcCcceeEEEecCCCceeEEEeC--CCc--EEEcCeEEecCChH
Q 048009 248 REAGAHIVTRAEVSQLMINDSGRVNGVQLA--DGA--QVHSSIVLSNATPY 294 (531)
Q Consensus 248 ~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~--~g~--~~~ad~VV~aa~~~ 294 (531)
++.|++++++++|++|..++ +++.+|++. +|+ ++.+|.||+++|..
T Consensus 194 ~~~gv~~~~~~~v~~i~~~~-~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 194 KNEKIELITSASVDEVYGDK-MGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HCTTEEEECSCEEEEEEEET-TEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred hcCCeEEEeCcEEEEEEcCC-CcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 46689999999999998876 777777776 786 78999999998844
No 243
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.38 E-value=0.00071 Score=67.29 Aligned_cols=35 Identities=29% Similarity=0.443 Sum_probs=32.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.++
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 35899999999999999999999999999999654
No 244
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.37 E-value=0.001 Score=62.42 Aligned_cols=35 Identities=37% Similarity=0.360 Sum_probs=31.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 36899999999999999999999999999998653
No 245
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.30 E-value=0.0017 Score=67.09 Aligned_cols=32 Identities=38% Similarity=0.470 Sum_probs=30.3
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERR 49 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~ 49 (531)
.+|+|||||..|+-+|..|++.|.+|+|+|+.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 57999999999999999999999999999985
No 246
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.28 E-value=0.0015 Score=61.40 Aligned_cols=35 Identities=31% Similarity=0.496 Sum_probs=32.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||+|..|+-.|..|++.|.+|+++++++.
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG 177 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 47899999999999999999999999999998653
No 247
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.18 E-value=0.002 Score=61.10 Aligned_cols=35 Identities=31% Similarity=0.574 Sum_probs=31.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||+|..|+-+|..|++.|.+|+|+++++.
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 193 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA 193 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc
Confidence 46899999999999999999999999999998653
No 248
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.16 E-value=0.0022 Score=64.03 Aligned_cols=35 Identities=26% Similarity=0.393 Sum_probs=32.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||||..|+-.|..|++.|.+|+|+|+.++
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDR 206 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 46899999999999999999999999999999764
No 249
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.12 E-value=0.0027 Score=60.02 Aligned_cols=34 Identities=29% Similarity=0.533 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|+|||+|..|+-+|..|++.|.+|+|+++.+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 4689999999999999999999999999999865
No 250
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.07 E-value=0.0037 Score=63.24 Aligned_cols=33 Identities=36% Similarity=0.521 Sum_probs=30.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERR 49 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~ 49 (531)
..+++|||||..|+-.|..|++.|.+|+|+++.
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 357999999999999999999999999999973
No 251
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.99 E-value=0.0029 Score=64.07 Aligned_cols=35 Identities=37% Similarity=0.360 Sum_probs=31.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+.
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 46899999999999999999999999999998643
No 252
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=96.88 E-value=0.0053 Score=57.71 Aligned_cols=35 Identities=34% Similarity=0.490 Sum_probs=31.8
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
...+|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~ 187 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD 187 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC
Confidence 34789999999999999999999999999999864
No 253
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.88 E-value=0.0028 Score=59.93 Aligned_cols=35 Identities=23% Similarity=0.405 Sum_probs=31.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||+|..|+-+|..|++.|.+|+++++.+.
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK 188 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc
Confidence 46899999999999999999999999999998643
No 254
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.86 E-value=0.0024 Score=59.27 Aligned_cols=32 Identities=16% Similarity=0.113 Sum_probs=29.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERR 49 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~ 49 (531)
..+|+|||+|..|+-.|..|++.| +|+++++.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~ 172 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNG 172 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECC
Confidence 468999999999999999999999 99998764
No 255
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.86 E-value=7.1e-05 Score=63.90 Aligned_cols=38 Identities=21% Similarity=0.133 Sum_probs=29.7
Q ss_pred CCCCCCeeecCCCCCC-CCCcCCc--hHHHHHHHHHHHhhh
Q 048009 491 RTPLQGLYMCGSGTHP-GGGVMGA--PGRNAAGIVLQDLKK 528 (531)
Q Consensus 491 ~t~~~~ly~aG~~~~~-g~g~~~~--sg~~aa~~i~~~~~~ 528 (531)
+.|..+|||||+.|.. .+.+.|| ||..||++|++.++.
T Consensus 114 ~~p~grl~FAGe~ts~~~g~~eGAl~SG~raA~~i~~~l~~ 154 (181)
T 2e1m_C 114 VRPEGPVYFAGEHVSLKHAWIEGAVETAVRAAIAVNEAPVG 154 (181)
T ss_dssp HSCBTTEEECSGGGTTSTTSHHHHHHHHHHHHHHHHTCCC-
T ss_pred hCCCCcEEEEEHHHcCCccCHHHHHHHHHHHHHHHHHHhcc
Confidence 4457899999999963 2456787 999999999987654
No 256
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.60 E-value=0.0036 Score=68.22 Aligned_cols=33 Identities=24% Similarity=0.188 Sum_probs=30.7
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
.+|+|||+|..|+-+|..|++.|.+|+|+|+.+
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~ 317 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARS 317 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 689999999999999999999999999999854
No 257
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.56 E-value=0.038 Score=56.16 Aligned_cols=35 Identities=23% Similarity=0.346 Sum_probs=32.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||+|.+|+-.|..|++.|.+|+|+++.+.
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 46899999999999999999999999999999764
No 258
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.49 E-value=0.0036 Score=66.18 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=31.2
Q ss_pred CCcEEEEC--CChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIG--GGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIG--aGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|+||| ||..|+-+|..|++.|.+|+|+|+.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 35899999 99999999999999999999999864
No 259
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.44 E-value=0.0028 Score=59.22 Aligned_cols=38 Identities=29% Similarity=0.325 Sum_probs=32.7
Q ss_pred ccCCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 13 LKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 13 ~~~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
|.++..+|.|||+|..|.+.|..|+++|++|+++++++
T Consensus 11 ~~~~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 33344679999999999999999999999999999864
No 260
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.40 E-value=0.0032 Score=52.20 Aligned_cols=37 Identities=24% Similarity=0.348 Sum_probs=33.2
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
....+|+|||+|..|...|..|.+.|++|+++++++.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3457899999999999999999999999999999753
No 261
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.38 E-value=0.0031 Score=51.10 Aligned_cols=34 Identities=21% Similarity=0.327 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
.++|+|||+|..|...|..|.+.|++|+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 262
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.37 E-value=0.0028 Score=61.43 Aligned_cols=38 Identities=24% Similarity=0.234 Sum_probs=34.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCc
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGG 54 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG 54 (531)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++..
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~ 183 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLE 183 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch
Confidence 36899999999999999999999999999999887543
No 263
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.34 E-value=0.012 Score=64.60 Aligned_cols=33 Identities=24% Similarity=0.388 Sum_probs=30.3
Q ss_pred CcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
-+|+|||||..|+-+|..|++.|. +|+|+++++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999996 899999864
No 264
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=96.27 E-value=0.0038 Score=59.48 Aligned_cols=44 Identities=25% Similarity=0.296 Sum_probs=33.4
Q ss_pred ccccccccCCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 7 TSTTSALKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 7 ~~~~~~~~~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
+.++.+|.+..++|+|||+|..|.+.|..|++.|++|+++++++
T Consensus 19 ~~~~~~m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 19 YFQSNAMEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp --------CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred hhhhhcccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 44555666556899999999999999999999999999999964
No 265
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.21 E-value=0.0066 Score=49.21 Aligned_cols=35 Identities=23% Similarity=0.304 Sum_probs=32.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
+-+|+|||.|-.|...|..|.+.|++|+++|+++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 46899999999999999999999999999999753
No 266
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.13 E-value=0.0037 Score=58.66 Aligned_cols=35 Identities=26% Similarity=0.510 Sum_probs=32.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 35899999999999999999999999999999775
No 267
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.11 E-value=0.0071 Score=49.89 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=32.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
.+.+|+|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 45789999999999999999999999999999963
No 268
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=96.11 E-value=0.0031 Score=55.77 Aligned_cols=49 Identities=18% Similarity=0.168 Sum_probs=33.7
Q ss_pred ccccccccccccc-CCCCcEEEECCChhHHHHHHHHHHcCCcEEE-EccCC
Q 048009 2 WRRSFTSTTSALK-EKKWDALVIGGGHNGLTAAAYLARAGLSVAV-LERRH 50 (531)
Q Consensus 2 ~~~~~~~~~~~~~-~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v-~E~~~ 50 (531)
|.++.+....... +.+++|.|||+|..|.+.|..|++.|++|++ ++++.
T Consensus 7 ~~~~~~~~~~~~~~m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 7 HSSGVDLGTENLYFQSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp ----------CTTGGGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred ccccccccccchhhhcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 4555666555544 5568999999999999999999999999998 88753
No 269
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.05 E-value=0.0069 Score=49.14 Aligned_cols=34 Identities=24% Similarity=0.456 Sum_probs=31.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
+.+|+|+|+|-.|...|..|.++|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4589999999999999999999999999999964
No 270
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.00 E-value=0.005 Score=61.28 Aligned_cols=36 Identities=33% Similarity=0.483 Sum_probs=33.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~ 52 (531)
..+|+|||||..|+.+|..|++.|.+|+|+|+.+.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 368999999999999999999999999999998764
No 271
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.93 E-value=0.0059 Score=60.85 Aligned_cols=37 Identities=35% Similarity=0.406 Sum_probs=33.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIG 53 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~G 53 (531)
..+|+|||||..|+.+|..|++.|.+|+|+|+.+++.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l 205 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL 205 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc
Confidence 3689999999999999999999999999999987653
No 272
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.90 E-value=0.0076 Score=56.77 Aligned_cols=38 Identities=24% Similarity=0.257 Sum_probs=33.5
Q ss_pred ccCCCCcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 13 LKEKKWDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 13 ~~~~~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
|.....+|+|||||..|.+.|..|++.|+ +|+++|.+.
T Consensus 5 ~~~~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 5 LVQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 44345799999999999999999999998 999999975
No 273
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.87 E-value=0.0065 Score=60.39 Aligned_cols=36 Identities=36% Similarity=0.442 Sum_probs=33.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~ 52 (531)
..+|+|||||.+|+.+|..|++.|.+|+|+|+.+.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~ 202 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRI 202 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 368999999999999999999999999999998764
No 274
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.86 E-value=0.0061 Score=56.68 Aligned_cols=34 Identities=26% Similarity=0.409 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
.-+|+|||||..|..-|..++.+|++|+|+|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 275
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.80 E-value=0.0075 Score=46.99 Aligned_cols=34 Identities=32% Similarity=0.565 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHcC-CcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAG-LSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G-~~V~v~E~~~ 50 (531)
..+|+|+|+|..|...+..|.++| ++|++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 368999999999999999999999 9999999864
No 276
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.79 E-value=0.021 Score=59.78 Aligned_cols=48 Identities=10% Similarity=0.082 Sum_probs=36.2
Q ss_pred HHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCC--cEEEcCeEEecCChHh
Q 048009 243 IGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADG--AQVHSSIVLSNATPYK 295 (531)
Q Consensus 243 l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g--~~~~ad~VV~aa~~~~ 295 (531)
+.+.+++.|++++++++|++|.. +.+. ++ .+| +++.+|.||+++|...
T Consensus 579 ~~~~l~~~GV~v~~~~~v~~i~~---~~v~-~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 579 HRTTLLSRGVKMIPGVSYQKIDD---DGLH-VV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHTTCEEECSCEEEEEET---TEEE-EE-ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHhcCCEEEeCcEEEEEeC---CeEE-Ee-cCCeEEEEeCCEEEECCCccc
Confidence 45667889999999999999973 2222 33 577 5789999999988654
No 277
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.64 E-value=0.01 Score=55.56 Aligned_cols=34 Identities=26% Similarity=0.409 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|.|||+|..|.+-|..|+++|++|+++++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999975
No 278
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.59 E-value=0.0098 Score=58.97 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=33.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~ 52 (531)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 202 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAP 202 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCch
Confidence 468999999999999999999999999999998764
No 279
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.56 E-value=0.01 Score=55.64 Aligned_cols=35 Identities=31% Similarity=0.518 Sum_probs=32.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 46899999999999999999999999999998643
No 280
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.53 E-value=0.013 Score=54.07 Aligned_cols=34 Identities=24% Similarity=0.217 Sum_probs=31.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|+|||+|..|...|..|++.|++|+++++++
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3589999999999999999999999999999864
No 281
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.48 E-value=0.013 Score=58.08 Aligned_cols=34 Identities=32% Similarity=0.394 Sum_probs=32.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|.|||.|.+|+++|..|+++|++|+++|++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4789999999999999999999999999999965
No 282
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.39 E-value=0.018 Score=49.12 Aligned_cols=34 Identities=26% Similarity=0.250 Sum_probs=31.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHc-CCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARA-GLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~-G~~V~v~E~~~ 50 (531)
..+|+|||+|..|...|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 46899999999999999999999 99999999975
No 283
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=95.38 E-value=0.015 Score=54.09 Aligned_cols=37 Identities=32% Similarity=0.442 Sum_probs=33.5
Q ss_pred ccCCCCcEEEECCChhHHHHHHHHHHcCC-cEEEEccC
Q 048009 13 LKEKKWDALVIGGGHNGLTAAAYLARAGL-SVAVLERR 49 (531)
Q Consensus 13 ~~~~~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~ 49 (531)
|.+...+|+|||+|..|.+.|+.|++.|+ +|+++|.+
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 44556789999999999999999999999 99999996
No 284
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.38 E-value=0.013 Score=58.37 Aligned_cols=36 Identities=25% Similarity=0.330 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~ 52 (531)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+.+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~ 201 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRL 201 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 368999999999999999999999999999998764
No 285
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=95.31 E-value=0.016 Score=54.44 Aligned_cols=35 Identities=29% Similarity=0.387 Sum_probs=32.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..++|.|||.|..|...|..|++.|++|+++++++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 35789999999999999999999999999999874
No 286
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.27 E-value=0.012 Score=58.15 Aligned_cols=38 Identities=24% Similarity=0.467 Sum_probs=34.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCc
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGG 54 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG 54 (531)
..+|.|||.|.+|+++|..|+++|++|+++|.+...-|
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~ 42 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG 42 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch
Confidence 35799999999999999999999999999999876543
No 287
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.26 E-value=0.017 Score=46.83 Aligned_cols=33 Identities=27% Similarity=0.251 Sum_probs=30.7
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
.+|+|+|+|..|...|..|.+.|++|++++++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 288
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.19 E-value=0.015 Score=51.23 Aligned_cols=33 Identities=15% Similarity=0.333 Sum_probs=31.0
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|+|||+|..|...|..|.++|++|+++|+++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999865
No 289
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.18 E-value=0.019 Score=54.27 Aligned_cols=33 Identities=33% Similarity=0.348 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERR 49 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~ 49 (531)
.++|+|||+|..|.+.|..|++.|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 478999999999999999999999999999984
No 290
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.14 E-value=0.018 Score=51.69 Aligned_cols=36 Identities=31% Similarity=0.302 Sum_probs=32.0
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
....+|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 346889999999999999999999999999999864
No 291
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=95.14 E-value=0.019 Score=57.61 Aligned_cols=37 Identities=30% Similarity=0.383 Sum_probs=34.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIG 53 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~G 53 (531)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 210 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA 210 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc
Confidence 4689999999999999999999999999999998764
No 292
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.13 E-value=0.017 Score=57.37 Aligned_cols=35 Identities=31% Similarity=0.447 Sum_probs=32.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..++|.|||+|..|+..|..|++.|++|++++++.
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 35899999999999999999999999999999864
No 293
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.13 E-value=0.017 Score=57.73 Aligned_cols=38 Identities=29% Similarity=0.406 Sum_probs=34.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCCc
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIGG 54 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~GG 54 (531)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++..
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 215 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG 215 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC
Confidence 36899999999999999999999999999999887543
No 294
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.11 E-value=0.022 Score=55.71 Aligned_cols=36 Identities=25% Similarity=0.373 Sum_probs=33.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
...+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 346899999999999999999999999999999764
No 295
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.10 E-value=0.019 Score=53.92 Aligned_cols=33 Identities=39% Similarity=0.535 Sum_probs=31.4
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|+|||+|..|.+.|..|++.|++|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999975
No 296
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.08 E-value=0.022 Score=49.66 Aligned_cols=35 Identities=17% Similarity=0.261 Sum_probs=32.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|.|||+|..|.+.|..|++.|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999999765
No 297
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.08 E-value=0.018 Score=53.97 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
+++|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3689999999999999999999999999999864
No 298
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.07 E-value=0.02 Score=53.60 Aligned_cols=33 Identities=36% Similarity=0.507 Sum_probs=30.7
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|+|||+|..|.+.|..|++.|++|+++.|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 689999999999999999999999999999975
No 299
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.07 E-value=0.021 Score=56.35 Aligned_cols=36 Identities=28% Similarity=0.254 Sum_probs=33.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHHc-CC-cEEEEccCCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARA-GL-SVAVLERRHV 51 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~-G~-~V~v~E~~~~ 51 (531)
..++|+|||+|..|+..|..|+++ |+ +|++++++..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 457899999999999999999999 99 9999999875
No 300
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.03 E-value=0.02 Score=52.67 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=31.3
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
.+.+|.|||+|..|..-|..|+ +|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4689999999999999999999 999999999975
No 301
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.98 E-value=0.022 Score=53.18 Aligned_cols=36 Identities=22% Similarity=0.283 Sum_probs=32.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
.+++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 357899999999999999999999999999999753
No 302
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.95 E-value=0.023 Score=52.46 Aligned_cols=34 Identities=24% Similarity=0.166 Sum_probs=31.3
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
++|.|||+|..|.+.|..|++.|++|++++++..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 3699999999999999999999999999999763
No 303
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=94.94 E-value=0.022 Score=52.98 Aligned_cols=35 Identities=29% Similarity=0.309 Sum_probs=31.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
...+|.|||.|..|.+.|..|++.|++|+++++++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34789999999999999999999999999999874
No 304
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.89 E-value=0.015 Score=54.55 Aligned_cols=36 Identities=31% Similarity=0.345 Sum_probs=30.6
Q ss_pred ccCCCCcEEEECCChhHHHHHHHHHHc-----C-CcEEEEcc
Q 048009 13 LKEKKWDALVIGGGHNGLTAAAYLARA-----G-LSVAVLER 48 (531)
Q Consensus 13 ~~~~~~dvvIIGaGiaGL~aA~~L~~~-----G-~~V~v~E~ 48 (531)
|...+++|.|||+|..|.+.|..|++. | ++|+++++
T Consensus 4 m~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 443346899999999999999999999 9 99999987
No 305
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.87 E-value=0.029 Score=52.57 Aligned_cols=35 Identities=23% Similarity=0.237 Sum_probs=32.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
...+|.|||+|..|...|..|++.|++|++++++.
T Consensus 29 ~~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34789999999999999999999999999999864
No 306
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.86 E-value=0.025 Score=55.45 Aligned_cols=36 Identities=22% Similarity=0.321 Sum_probs=33.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
.+.+++|||.|..|+..|..|+++|++|+++++++.
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 358999999999999999999999999999999865
No 307
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.84 E-value=0.023 Score=56.83 Aligned_cols=36 Identities=19% Similarity=0.320 Sum_probs=33.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~ 52 (531)
..+++|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 220 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETV 220 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcc
Confidence 468999999999999999999999999999998764
No 308
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=94.82 E-value=0.027 Score=55.87 Aligned_cols=34 Identities=26% Similarity=0.259 Sum_probs=31.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|.|||+|..|...|..|+++|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999875
No 309
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=94.81 E-value=0.034 Score=43.81 Aligned_cols=51 Identities=8% Similarity=0.014 Sum_probs=42.2
Q ss_pred EEEcCeEEecCChHhHHhhcCCCCCCChHHHHHhhccCCCCCeEEEeeecCCC
Q 048009 281 QVHSSIVLSNATPYKTFMDLVPGNILPDDFILSIKHSDYSSGTTKINLAVDKL 333 (531)
Q Consensus 281 ~~~ad~VV~aa~~~~~~~~ll~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 333 (531)
+++||+||+|..+.. +..+.-.+.+|+.+.++++.+.+ .+..++++.++++
T Consensus 5 ~~~Ad~VIvTvP~~v-L~~I~F~P~LP~~k~~Ai~~l~~-g~~~Kv~l~f~~~ 55 (130)
T 2e1m_B 5 TWTGDLAIVTIPFSS-LRFVKVTPPFSYKKRRAVIETHY-DQATKVLLEFSRR 55 (130)
T ss_dssp EEEESEEEECSCHHH-HTTSEEESCCCHHHHHHHHHCCE-ECEEEEEEEESSC
T ss_pred EEEcCEEEEcCCHHH-HhcCcCCCCCCHHHHHHHHhCCC-cceeEEEEEECCC
Confidence 589999999887776 56664445699999999999988 7889999999875
No 310
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.80 E-value=0.025 Score=53.76 Aligned_cols=36 Identities=19% Similarity=0.200 Sum_probs=32.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
+..++|.|||.|..|...|..|++.|++|+++++++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 345799999999999999999999999999999864
No 311
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.78 E-value=0.029 Score=53.75 Aligned_cols=36 Identities=31% Similarity=0.380 Sum_probs=32.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
...+|+|||+|..|+.+|..|...|.+|+++|+++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 357899999999999999999999999999999764
No 312
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.72 E-value=0.023 Score=57.19 Aligned_cols=37 Identities=16% Similarity=0.233 Sum_probs=33.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIG 53 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~G 53 (531)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 212 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL 212 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC
Confidence 4689999999999999999999999999999987643
No 313
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.71 E-value=0.026 Score=52.37 Aligned_cols=35 Identities=23% Similarity=0.148 Sum_probs=32.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|.|||.|..|...|..|++.|++|+++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999999864
No 314
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.69 E-value=0.028 Score=52.78 Aligned_cols=34 Identities=26% Similarity=0.296 Sum_probs=31.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC--cEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL--SVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~~ 50 (531)
.++|+|||+|..|.+.|..|++.|+ +|++++++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999999 999999964
No 315
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.63 E-value=0.028 Score=53.71 Aligned_cols=34 Identities=35% Similarity=0.366 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
.++|+|||+|..|...|..|++.|++|+++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999863
No 316
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.59 E-value=0.028 Score=55.38 Aligned_cols=33 Identities=30% Similarity=0.459 Sum_probs=31.4
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|.|||+|..|+..|..|+++|++|+++++++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 689999999999999999999999999999974
No 317
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.56 E-value=0.035 Score=52.19 Aligned_cols=35 Identities=23% Similarity=0.185 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHH-HHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLT-AAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~-aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|.|||.|-+|++ +|..|.++|++|++.|++..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 467999999999997 78889999999999999764
No 318
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=94.56 E-value=0.03 Score=55.76 Aligned_cols=36 Identities=33% Similarity=0.350 Sum_probs=33.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~ 52 (531)
..+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLF 211 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc
Confidence 468999999999999999999999999999998764
No 319
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=94.52 E-value=0.03 Score=55.78 Aligned_cols=37 Identities=35% Similarity=0.409 Sum_probs=33.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIG 53 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~G 53 (531)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 210 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA 210 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc
Confidence 4689999999999999999999999999999987643
No 320
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.52 E-value=0.026 Score=52.30 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=31.2
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|+|||+|..|.+.|..|++.|++|+++.|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 689999999999999999999999999999974
No 321
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.47 E-value=0.031 Score=55.30 Aligned_cols=35 Identities=31% Similarity=0.320 Sum_probs=32.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
...+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 34679999999999999999999999999999864
No 322
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.47 E-value=0.033 Score=51.40 Aligned_cols=34 Identities=32% Similarity=0.295 Sum_probs=31.6
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
++|.|||.|..|...|..|++.|++|+++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5799999999999999999999999999999753
No 323
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.43 E-value=0.035 Score=54.13 Aligned_cols=37 Identities=38% Similarity=0.406 Sum_probs=33.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIG 53 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~G 53 (531)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+.+.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~ 178 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM 178 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch
Confidence 4689999999999999999999999999999987653
No 324
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.43 E-value=0.032 Score=51.44 Aligned_cols=34 Identities=35% Similarity=0.336 Sum_probs=31.5
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
.+|.|||.|..|...|..|++.|++|+++++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999999753
No 325
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.42 E-value=0.032 Score=52.95 Aligned_cols=34 Identities=35% Similarity=0.372 Sum_probs=31.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|+|||+|..|+.+|..|...|.+|+++++++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999999999999999999999999999975
No 326
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.40 E-value=0.041 Score=51.40 Aligned_cols=36 Identities=22% Similarity=0.218 Sum_probs=32.4
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
|...+|+|||+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 446799999999999999999999999 999999965
No 327
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.38 E-value=0.055 Score=52.78 Aligned_cols=52 Identities=12% Similarity=0.149 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChH
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPY 294 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~ 294 (531)
..+.+.+.+.+++.|++++++++|++|..+ +|+++||+++.+|.||+++|..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~------~v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIREH------EIVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECSS------EEEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECCC------eEEECCCCEEeeeEEEECCCCC
Confidence 578888899999999999999999998642 2778999999999999987743
No 328
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=94.35 E-value=0.034 Score=54.38 Aligned_cols=37 Identities=43% Similarity=0.557 Sum_probs=34.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIG 53 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~G 53 (531)
..+|+|||+|..|+-+|..|++.|.+|+|+|+.+.+-
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l 188 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL 188 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh
Confidence 5689999999999999999999999999999988753
No 329
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.32 E-value=0.036 Score=55.09 Aligned_cols=35 Identities=11% Similarity=0.088 Sum_probs=32.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||+|.+|+-.|..|++.|.+|+|+++++.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 46899999999999999999999999999998765
No 330
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.31 E-value=0.038 Score=52.23 Aligned_cols=34 Identities=29% Similarity=0.410 Sum_probs=31.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
.++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4899999999999999999999999999999863
No 331
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=94.28 E-value=0.035 Score=53.92 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=31.3
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
+..++|+|||+|..|+..|..|++ |++|+++++++
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 345789999999999999999998 99999999975
No 332
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.26 E-value=0.056 Score=50.28 Aligned_cols=34 Identities=35% Similarity=0.471 Sum_probs=31.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|.|||.|..|...|..|++.|++|+++++++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5789999999999999999999999999999864
No 333
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.22 E-value=0.035 Score=51.86 Aligned_cols=35 Identities=23% Similarity=0.219 Sum_probs=31.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
..++|.|||.|..|.+.|..|++.|+ +|++++++.
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 45789999999999999999999999 999999963
No 334
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.22 E-value=0.047 Score=47.85 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=31.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
...+|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999864
No 335
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.21 E-value=0.042 Score=51.45 Aligned_cols=34 Identities=24% Similarity=0.368 Sum_probs=31.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
..+|+|||+|..|.+.|..|+++|+ +|+++|++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3689999999999999999999998 999999975
No 336
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=94.19 E-value=0.018 Score=50.70 Aligned_cols=34 Identities=21% Similarity=0.256 Sum_probs=31.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERR 49 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~ 49 (531)
..++|.|||+|..|-+-|..|+++|++|+++++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 4578999999999999999999999999999985
No 337
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=94.17 E-value=0.035 Score=55.67 Aligned_cols=36 Identities=36% Similarity=0.484 Sum_probs=33.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~ 52 (531)
..+|+|||||..|+-.|..|++.|.+|+|+|+.+++
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 233 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTI 233 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccc
Confidence 468999999999999999999999999999998753
No 338
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.17 E-value=0.048 Score=51.21 Aligned_cols=33 Identities=27% Similarity=0.345 Sum_probs=31.1
Q ss_pred CcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
.+|+|||||..|.+.|..|++.|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 689999999999999999999998 999999975
No 339
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.15 E-value=0.019 Score=56.75 Aligned_cols=36 Identities=17% Similarity=0.329 Sum_probs=33.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
+.++|+|+|+|-.|...|..|.+.|++|+|+|+++.
T Consensus 2 ~~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 2 NAMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CCEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred CcCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 468899999999999999999999999999999753
No 340
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.14 E-value=0.038 Score=54.33 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=30.7
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|+|||+|..|+..|..|++.|++|+++++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 379999999999999999999999999999864
No 341
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=94.14 E-value=0.036 Score=52.39 Aligned_cols=36 Identities=36% Similarity=0.600 Sum_probs=32.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~ 52 (531)
..+|+|||+|..|+-.|..|++.|.+|+|+++++.+
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~ 190 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEF 190 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcC
Confidence 478999999999999999999999999999997653
No 342
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=94.13 E-value=0.041 Score=54.99 Aligned_cols=36 Identities=17% Similarity=0.322 Sum_probs=33.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~ 52 (531)
..+|+|||||..|+-.|..|++.|.+|+|+++.+++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 222 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKV 222 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcc
Confidence 368999999999999999999999999999998764
No 343
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.09 E-value=0.054 Score=47.34 Aligned_cols=34 Identities=24% Similarity=0.375 Sum_probs=31.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERR 49 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~ 49 (531)
...+|+|||||-.|...|..|.+.|.+|+|++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4578999999999999999999999999999875
No 344
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=94.07 E-value=0.045 Score=50.82 Aligned_cols=33 Identities=30% Similarity=0.383 Sum_probs=30.6
Q ss_pred CcEEEECCChhHHHHHHHHHHcCC--cEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGL--SVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~~ 50 (531)
++|+|||+|..|.+.|..|+.+|+ +|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999998 999999864
No 345
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.06 E-value=0.052 Score=52.77 Aligned_cols=36 Identities=22% Similarity=0.144 Sum_probs=33.1
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
+.+.+|.|||.|-.||..|..|+++|++|+.+|-+.
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 456789999999999999999999999999999874
No 346
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.05 E-value=0.044 Score=51.36 Aligned_cols=34 Identities=29% Similarity=0.447 Sum_probs=29.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
...+|+|||+|..|.+.|..|++.|++|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 3478999999999999999999999999999 653
No 347
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.03 E-value=0.042 Score=51.97 Aligned_cols=35 Identities=31% Similarity=0.475 Sum_probs=32.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
.+.+|+|+|||.+|+.+|..|...|. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 46899999999999999999999998 899999973
No 348
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.98 E-value=0.048 Score=50.67 Aligned_cols=34 Identities=29% Similarity=0.355 Sum_probs=31.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
+.+|.|||+|..|...|..|++.|++|+++++++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4689999999999999999999999999999864
No 349
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=93.98 E-value=0.057 Score=50.51 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
..+|+|||+|..|.+.|..|+..|+ +|.++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4689999999999999999999998 999999864
No 350
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=93.87 E-value=0.042 Score=55.10 Aligned_cols=36 Identities=25% Similarity=0.357 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHc---CCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARA---GLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~---G~~V~v~E~~~~~ 52 (531)
..+++|||||..|+-.|..|++. |.+|+|+|+.+++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 229 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLI 229 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcc
Confidence 36899999999999999999999 9999999998764
No 351
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=93.87 E-value=0.06 Score=53.20 Aligned_cols=35 Identities=20% Similarity=0.228 Sum_probs=32.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
.+.+|.|||.|..|.+.|..|+++|++|+++++++
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35789999999999999999999999999999975
No 352
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=93.86 E-value=0.048 Score=54.02 Aligned_cols=36 Identities=28% Similarity=0.407 Sum_probs=33.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~ 52 (531)
..+++|||+|..|+-+|..|++.|.+|+|+|+.+++
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 182 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENL 182 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcc
Confidence 467999999999999999999999999999998764
No 353
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=93.84 E-value=0.047 Score=54.02 Aligned_cols=36 Identities=14% Similarity=-0.011 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCc-EEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLS-VAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~-V~v~E~~~~~ 52 (531)
..+|+|||+|.+|+-.|..|++.|.+ |+|+++++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 46899999999999999999999999 9999998765
No 354
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.82 E-value=0.059 Score=50.33 Aligned_cols=35 Identities=20% Similarity=0.285 Sum_probs=31.0
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCC--cEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGL--SVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~~ 50 (531)
...+|+|||+|-.|.+.|+.|+..|+ +|.++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 35799999999999999999999987 899999864
No 355
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.82 E-value=0.032 Score=53.49 Aligned_cols=32 Identities=28% Similarity=0.350 Sum_probs=30.4
Q ss_pred cEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 19 dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
+|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999999864
No 356
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.74 E-value=0.055 Score=50.39 Aligned_cols=32 Identities=41% Similarity=0.575 Sum_probs=30.1
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|+|||+|..|.+.|..|+ .|++|+++.|++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 68999999999999999999 999999999864
No 357
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.74 E-value=0.046 Score=51.63 Aligned_cols=31 Identities=19% Similarity=0.252 Sum_probs=29.5
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEcc
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLER 48 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~ 48 (531)
++|.|||+|..|.+.|..|++.|++|+++++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 3699999999999999999999999999998
No 358
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.73 E-value=0.04 Score=49.89 Aligned_cols=35 Identities=31% Similarity=0.432 Sum_probs=32.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
...+|+|||||-.|+..|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45789999999999999999999999999998754
No 359
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=93.70 E-value=0.047 Score=54.67 Aligned_cols=36 Identities=28% Similarity=0.325 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHc---CCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARA---GLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~---G~~V~v~E~~~~~ 52 (531)
..+++|||||..|+-.|..|++. |.+|+|+|+.+++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 225 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMI 225 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCc
Confidence 36899999999999999999999 9999999998764
No 360
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=93.68 E-value=0.11 Score=52.91 Aligned_cols=37 Identities=35% Similarity=0.563 Sum_probs=34.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVI 52 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~ 52 (531)
.++|++|||||.+|+++|.+|++.|++|+|+|+....
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 5699999999999999999999999999999998754
No 361
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=93.67 E-value=0.065 Score=48.55 Aligned_cols=35 Identities=17% Similarity=0.075 Sum_probs=32.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcC----CcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAG----LSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G----~~V~v~E~~~~ 51 (531)
.++|.|||+|..|.+-|..|++.| ++|++++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 468999999999999999999999 79999999765
No 362
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.67 E-value=0.058 Score=53.69 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHc--CCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARA--GLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~--G~~V~v~E~~~ 50 (531)
.++|.|||.|..|+..|..|+++ |++|++++++.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46899999999999999999998 79999999863
No 363
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=93.65 E-value=0.058 Score=54.51 Aligned_cols=36 Identities=17% Similarity=0.375 Sum_probs=33.5
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIG 53 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~G 53 (531)
.+++|||||..|+-.|..|++.|.+|+|+|+.+.+.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l 250 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK 250 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc
Confidence 789999999999999999999999999999987653
No 364
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.64 E-value=0.056 Score=51.10 Aligned_cols=34 Identities=24% Similarity=0.468 Sum_probs=31.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCC-cEEEEccC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGL-SVAVLERR 49 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~ 49 (531)
...+|+|+|||.+|..+|..|...|. +|+|+|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 46899999999999999999999997 79999996
No 365
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.63 E-value=0.062 Score=50.07 Aligned_cols=33 Identities=30% Similarity=0.365 Sum_probs=30.1
Q ss_pred CcEEEECCChhHHHHHHHHHHc--CCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARA--GLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~--G~~V~v~E~~~ 50 (531)
++|+|||+|..|.+.|..|++. |++|+++|++.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3799999999999999999995 79999999975
No 366
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.62 E-value=0.063 Score=50.16 Aligned_cols=35 Identities=23% Similarity=0.346 Sum_probs=31.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCC--cEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGL--SVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~~ 50 (531)
...+|+|||+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 45789999999999999999999987 899999853
No 367
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.55 E-value=0.077 Score=49.51 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=31.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
...+|+|||+|..|.+.|..|+..|+ +|.++|.+.
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 35789999999999999999999988 999999975
No 368
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=93.55 E-value=0.067 Score=53.73 Aligned_cols=37 Identities=19% Similarity=0.286 Sum_probs=34.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVIG 53 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~G 53 (531)
..+++|||+|..|+-.|..|++.|.+|+|+|+.+.+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l 218 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL 218 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc
Confidence 4689999999999999999999999999999988654
No 369
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.49 E-value=0.06 Score=53.72 Aligned_cols=36 Identities=36% Similarity=0.368 Sum_probs=33.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~ 52 (531)
..+|+|||+|..|+-.|..|++.|.+|+|+|+.+++
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 215 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKF 215 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCc
Confidence 468999999999999999999999999999998764
No 370
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=93.48 E-value=0.071 Score=50.02 Aligned_cols=36 Identities=17% Similarity=0.151 Sum_probs=31.6
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcC----CcEEEEccCC
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAG----LSVAVLERRH 50 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G----~~V~v~E~~~ 50 (531)
+..++|.|||+|..|.+-|..|++.| ++|++++++.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 34578999999999999999999999 8999999865
No 371
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.47 E-value=0.088 Score=48.20 Aligned_cols=35 Identities=23% Similarity=0.313 Sum_probs=32.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCC---cEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGL---SVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~---~V~v~E~~~ 50 (531)
...+|.|||+|..|.+.|..|++.|+ +|+++++++
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 35789999999999999999999999 899999975
No 372
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.45 E-value=0.047 Score=51.08 Aligned_cols=34 Identities=21% Similarity=0.150 Sum_probs=31.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHcC-CcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAG-LSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G-~~V~v~E~~~ 50 (531)
.++|.|||.|..|.+.|..|++.| ++|++++++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 368999999999999999999999 9999999975
No 373
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=93.39 E-value=0.088 Score=53.18 Aligned_cols=35 Identities=29% Similarity=0.393 Sum_probs=31.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+++|||||..|+-.|..+++.|.+|+|+++...
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~ 257 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIV 257 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEeccccc
Confidence 46899999999999999999999999999998543
No 374
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.39 E-value=0.029 Score=45.58 Aligned_cols=34 Identities=24% Similarity=0.297 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|+|||+|..|...|..|++.|++|+|++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 5789999999999999999999999999999863
No 375
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=93.34 E-value=0.089 Score=48.40 Aligned_cols=33 Identities=15% Similarity=0.239 Sum_probs=31.0
Q ss_pred CcEEEECC-ChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGG-GHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGa-GiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|.|||+ |..|.+.|..|++.|++|++++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 58999999 9999999999999999999999864
No 376
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.29 E-value=0.054 Score=52.55 Aligned_cols=32 Identities=22% Similarity=0.270 Sum_probs=29.6
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|.|||+|..|+..|..|++ |++|++++++.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 379999999999999999999 99999999864
No 377
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=93.20 E-value=0.082 Score=52.25 Aligned_cols=35 Identities=31% Similarity=0.460 Sum_probs=31.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC-cEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL-SVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~~ 51 (531)
..+|+|||||..|+-+|..|.+.|. +|+|+++++.
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 4689999999999999999999997 5999999764
No 378
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.19 E-value=0.083 Score=51.30 Aligned_cols=36 Identities=19% Similarity=0.317 Sum_probs=32.5
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
...+|+|||.|-.|...|..|.+.|++|+|+|+++.
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 346899999999999999999999999999999854
No 379
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=93.18 E-value=0.073 Score=46.42 Aligned_cols=31 Identities=32% Similarity=0.397 Sum_probs=29.3
Q ss_pred cEEEEC-CChhHHHHHHHHHHcCCcEEEEccC
Q 048009 19 DALVIG-GGHNGLTAAAYLARAGLSVAVLERR 49 (531)
Q Consensus 19 dvvIIG-aGiaGL~aA~~L~~~G~~V~v~E~~ 49 (531)
+|+||| +|..|...|..|+++|++|++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 699999 9999999999999999999999885
No 380
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=93.15 E-value=0.079 Score=51.23 Aligned_cols=34 Identities=29% Similarity=0.401 Sum_probs=31.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|+|||+|..|+.+|..|...|.+|++++++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999875
No 381
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=93.13 E-value=0.047 Score=52.08 Aligned_cols=35 Identities=14% Similarity=0.149 Sum_probs=32.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHcC-------CcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAG-------LSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G-------~~V~v~E~~~~ 51 (531)
.++|+|||+|..|.+.|..|++.| ++|+++++++.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 468999999999999999999999 99999999765
No 382
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.12 E-value=0.072 Score=49.85 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=30.4
Q ss_pred CcEEEECCChhHHHHHHHHHHcCC--cEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGL--SVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~~ 50 (531)
++|+|||+|..|.+.|..|++.|+ +|+++|++.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 379999999999999999999999 999999863
No 383
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=93.09 E-value=0.09 Score=52.61 Aligned_cols=34 Identities=29% Similarity=0.432 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+++|||||..|+-.|..|++.|.+|+|+++..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI 218 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc
Confidence 3579999999999999999999999999999864
No 384
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=93.09 E-value=0.079 Score=52.62 Aligned_cols=36 Identities=22% Similarity=0.274 Sum_probs=32.0
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
+.+.+|.|||+|..|.+.|..|+++|++|+++++++
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 345789999999999999999999999999999874
No 385
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=93.06 E-value=0.085 Score=55.28 Aligned_cols=34 Identities=26% Similarity=0.271 Sum_probs=31.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 4579999999999999999999999999999975
No 386
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.06 E-value=0.068 Score=49.41 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=28.1
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
.+|.+||-|..|..-|..|.++||+|+++++++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998764
No 387
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=93.02 E-value=0.096 Score=48.42 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=30.6
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999999864
No 388
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=93.01 E-value=0.079 Score=48.03 Aligned_cols=33 Identities=21% Similarity=0.420 Sum_probs=30.3
Q ss_pred CcEEEECCChhHHHHHHHHHHcC-CcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAG-LSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G-~~V~v~E~~~ 50 (531)
++|.|||+|..|.+.|..|++.| ++|+++++++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 36999999999999999999999 9999999863
No 389
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.99 E-value=0.097 Score=52.15 Aligned_cols=34 Identities=24% Similarity=0.203 Sum_probs=32.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|.|||.|..|.+.|..|+++|++|+++++++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4789999999999999999999999999999875
No 390
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=92.98 E-value=0.11 Score=48.86 Aligned_cols=34 Identities=24% Similarity=0.137 Sum_probs=31.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|.|||.|..|-+.|..|++.|++|+++++++
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4679999999999999999999999999999875
No 391
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.98 E-value=0.11 Score=48.52 Aligned_cols=34 Identities=24% Similarity=0.320 Sum_probs=31.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC--cEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL--SVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~~ 50 (531)
..+|.|||.|..|.+.|..|++.|+ +|+++++++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 3689999999999999999999999 999999975
No 392
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.97 E-value=0.081 Score=49.30 Aligned_cols=33 Identities=21% Similarity=0.229 Sum_probs=30.5
Q ss_pred CcEEEECCChhHHHHHHHHHHcC--CcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAG--LSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G--~~V~v~E~~~ 50 (531)
++|+|||+|..|.+.|..|+++| ++|++++++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 57999999999999999999999 7999999964
No 393
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.91 E-value=0.1 Score=48.58 Aligned_cols=33 Identities=30% Similarity=0.432 Sum_probs=30.5
Q ss_pred CcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
.+|+|||+|..|.+.|..|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999997 999999864
No 394
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.85 E-value=0.094 Score=48.01 Aligned_cols=33 Identities=27% Similarity=0.285 Sum_probs=30.4
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 369999999999999999999999999999864
No 395
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.83 E-value=0.1 Score=50.23 Aligned_cols=36 Identities=33% Similarity=0.337 Sum_probs=32.4
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
...+|+|||+|..|+.+|..|...|.+|+++++++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 357899999999999999999999999999998753
No 396
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=92.80 E-value=0.083 Score=52.62 Aligned_cols=36 Identities=36% Similarity=0.538 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHc-CCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARA-GLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~-G~~V~v~E~~~~~ 52 (531)
..+|+|||+|..|+-+|..|++. |.+|+++|+.+.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~ 195 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQI 195 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcc
Confidence 46899999999999999999999 9999999998754
No 397
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=92.77 E-value=0.089 Score=48.36 Aligned_cols=33 Identities=18% Similarity=0.116 Sum_probs=30.4
Q ss_pred CcEEEECCChhHHHHHHHHHHcCC--cEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGL--SVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~~ 50 (531)
++|+|||+|..|.+.|..|++.|+ +|+++|.+.
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 479999999999999999999998 899999864
No 398
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.74 E-value=0.088 Score=52.20 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHc--CCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARA--GLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~--G~~V~v~E~~~ 50 (531)
.++|.|||.|..|+..|..|++. |++|++++++.
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 36899999999999999999999 89999999864
No 399
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=92.69 E-value=0.11 Score=51.70 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=31.1
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|.|||+|..|...|..|+++|++|++++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 589999999999999999999999999999864
No 400
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=92.69 E-value=0.084 Score=50.75 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=31.7
Q ss_pred CcEEEECCChhHHHHHHHHHHcC-------CcEEEEccCCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAG-------LSVAVLERRHV 51 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G-------~~V~v~E~~~~ 51 (531)
.+|.|||+|..|.+.|..|++.| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 57999999999999999999999 99999999765
No 401
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.61 E-value=0.12 Score=47.07 Aligned_cols=34 Identities=21% Similarity=0.207 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
...|+|+|+|-.|.++|..|++.|.+|+|+.|+.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4679999999999999999999999999998863
No 402
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=92.60 E-value=0.11 Score=48.17 Aligned_cols=34 Identities=24% Similarity=0.252 Sum_probs=31.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|.|||+|..|...|..|++.|++|+++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 403
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.58 E-value=0.11 Score=48.02 Aligned_cols=33 Identities=27% Similarity=0.529 Sum_probs=30.9
Q ss_pred CcEEEEC-CChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIG-GGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIG-aGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
.+|.||| +|..|.+.|..|++.|++|+++++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 5799999 99999999999999999999999865
No 404
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.57 E-value=0.13 Score=46.43 Aligned_cols=35 Identities=34% Similarity=0.505 Sum_probs=32.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||+|-+|.++|+.|++.|.+|+|+.|+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999999754
No 405
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=92.51 E-value=0.1 Score=48.17 Aligned_cols=35 Identities=20% Similarity=0.398 Sum_probs=30.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC--cEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL--SVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~~~ 51 (531)
..+|+|||||..|...|+.|+.+|+ +|.|+|.+..
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 4789999999999999999999998 9999999763
No 406
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.50 E-value=0.17 Score=50.61 Aligned_cols=49 Identities=12% Similarity=0.058 Sum_probs=41.6
Q ss_pred HHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCCcEEEcCeEEecCChHh
Q 048009 245 SAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADGAQVHSSIVLSNATPYK 295 (531)
Q Consensus 245 ~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g~~~~ad~VV~aa~~~~ 295 (531)
+.++++|++|+++++|++|..+ +++.+|++.+|+++.+|.||+++|...
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~--~~v~~v~~~~g~~i~aD~Vv~a~G~~p 313 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGN--EKVERVIDMNNHEYKVDALIFADGRRP 313 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECS--SSCCEEEETTCCEEECSEEEECCCEEE
T ss_pred HHHHhCCcEEEeCCeeEEEecC--CceEEEEeCCCeEEEeCEEEECCCcCc
Confidence 6678899999999999999854 445668888998899999999998664
No 407
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=92.48 E-value=0.13 Score=51.15 Aligned_cols=34 Identities=24% Similarity=0.257 Sum_probs=31.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
+.+|.|||+|..|...|..|+++|++|++++++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999864
No 408
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=92.48 E-value=0.11 Score=47.85 Aligned_cols=32 Identities=31% Similarity=0.324 Sum_probs=29.7
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|.|||+|..|...|..|++ |++|++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 479999999999999999999 99999999864
No 409
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.48 E-value=0.14 Score=47.03 Aligned_cols=35 Identities=31% Similarity=0.330 Sum_probs=32.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
+++|+|+|+|..|...+..|.++|++|+++.|+..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 46899999999999999999999999999998753
No 410
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=92.47 E-value=0.098 Score=47.27 Aligned_cols=34 Identities=12% Similarity=0.038 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
+++|.|||+|..|...|..|.+.|++|.++++++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 4689999999999999999999999999999863
No 411
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=92.47 E-value=0.12 Score=51.36 Aligned_cols=33 Identities=36% Similarity=0.438 Sum_probs=30.9
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|.|||+|..|...|..|+++|++|++++++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 412
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=92.47 E-value=0.1 Score=47.41 Aligned_cols=34 Identities=29% Similarity=0.389 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCc-EEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLS-VAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~-V~v~E~~~ 50 (531)
.++|.|||+|..|...|..|++.|++ |.+++++.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 36899999999999999999999999 99999864
No 413
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.43 E-value=0.1 Score=49.76 Aligned_cols=33 Identities=24% Similarity=0.390 Sum_probs=30.9
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
.+|+|+|+|.+|+.++..|+..|.+|+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 689999999999999999999999999999864
No 414
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=92.42 E-value=0.1 Score=50.68 Aligned_cols=33 Identities=24% Similarity=0.346 Sum_probs=31.3
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
-+..|||.|..|+..|..|+++|++|+++++++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 578999999999999999999999999999975
No 415
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=92.41 E-value=0.1 Score=49.63 Aligned_cols=40 Identities=28% Similarity=0.489 Sum_probs=34.8
Q ss_pred CCCcEEEECC-ChhHHHHHHHHHHcCC---cEEEEccCC-CCCce
Q 048009 16 KKWDALVIGG-GHNGLTAAAYLARAGL---SVAVLERRH-VIGGA 55 (531)
Q Consensus 16 ~~~dvvIIGa-GiaGL~aA~~L~~~G~---~V~v~E~~~-~~GG~ 55 (531)
...+|+|||| |.+|+.|+..+...|. +|+++|.+. .-||+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 4689999999 9999999999999997 999999976 34553
No 416
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=92.35 E-value=0.086 Score=48.71 Aligned_cols=33 Identities=33% Similarity=0.241 Sum_probs=29.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
+++|.|||+|..|...|..|++.|++|++++ +.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 3689999999999999999999999999998 54
No 417
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.34 E-value=0.11 Score=47.97 Aligned_cols=33 Identities=30% Similarity=0.339 Sum_probs=30.8
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|.|||+|..|...|..|++.|++|.+++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999864
No 418
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=92.30 E-value=0.12 Score=48.07 Aligned_cols=33 Identities=30% Similarity=0.500 Sum_probs=30.4
Q ss_pred CcEEEECCChhHHHHHHHHHHcCC--cEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGL--SVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~~ 50 (531)
++|+|||+|..|.+.|+.|++.|+ +|.++|.+.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 479999999999999999999987 899999975
No 419
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=92.30 E-value=0.11 Score=54.31 Aligned_cols=35 Identities=23% Similarity=0.188 Sum_probs=32.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
...+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 34679999999999999999999999999999975
No 420
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=92.29 E-value=0.16 Score=47.73 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=31.2
Q ss_pred CCCCcEEEECC-ChhHHHHHHHHHHcC--CcEEEEccC
Q 048009 15 EKKWDALVIGG-GHNGLTAAAYLARAG--LSVAVLERR 49 (531)
Q Consensus 15 ~~~~dvvIIGa-GiaGL~aA~~L~~~G--~~V~v~E~~ 49 (531)
+...+|+|||+ |..|.++|+.|+.+| .+|+++|..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 45689999998 999999999999998 489999985
No 421
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=92.27 E-value=0.12 Score=51.31 Aligned_cols=36 Identities=22% Similarity=0.313 Sum_probs=33.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~ 52 (531)
..+++|||+|..|+-.|..|++.|.+|+++|+.+.+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~ 205 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEI 205 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 468999999999999999999999999999998754
No 422
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.25 E-value=0.04 Score=50.25 Aligned_cols=38 Identities=34% Similarity=0.564 Sum_probs=30.9
Q ss_pred CCCCCCeeecCCCCCCCCCcCCc--hHHHHHHHHHHHhhhh
Q 048009 491 RTPLQGLYMCGSGTHPGGGVMGA--PGRNAAGIVLQDLKKS 529 (531)
Q Consensus 491 ~t~~~~ly~aG~~~~~g~g~~~~--sg~~aa~~i~~~~~~~ 529 (531)
.+..+++|+|||++. |+|+..| ||+.||+.|++.|+.+
T Consensus 291 ~~~~~~v~l~GDa~~-g~gv~~A~~sG~~aA~~I~~~L~~e 330 (336)
T 3kkj_A 291 SDADLGIYVCGDWCL-SGRVEGAWLSGQEAARRLLEHLQLE 330 (336)
T ss_dssp EETTTTEEECCGGGT-TSSHHHHHHHHHHHHHHHHHHTTC-
T ss_pred eeCCCCEEEEecccC-CcCHHHHHHHHHHHHHHHHHHhhcc
Confidence 345689999999985 5678776 9999999999988653
No 423
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.23 E-value=0.12 Score=51.62 Aligned_cols=36 Identities=25% Similarity=0.464 Sum_probs=33.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHVI 52 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~~ 52 (531)
..+++|||+|..|+-.|..|++.|.+|+++|+.+.+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI 226 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc
Confidence 468999999999999999999999999999998764
No 424
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.20 E-value=0.14 Score=46.97 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=30.3
Q ss_pred CcEEEECCChhHHHHHHHHHHcCC--cEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGL--SVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~~ 50 (531)
.+|.|||+|..|.+.|..|++.|+ +|+++++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 479999999999999999999998 899999864
No 425
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=92.19 E-value=0.16 Score=47.24 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=31.6
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCC--cEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGL--SVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~~ 50 (531)
+..+|+|||+|..|.+.|+.|+.+|+ +|.++|.+.
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 45789999999999999999999997 899999853
No 426
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=92.13 E-value=0.16 Score=45.52 Aligned_cols=33 Identities=12% Similarity=0.179 Sum_probs=30.8
Q ss_pred CcEEEECCChhHHHHHHHHHHcCC----cEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGL----SVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~----~V~v~E~~~ 50 (531)
.+|.|||+|..|.+.|..|.+.|+ +|+++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 589999999999999999999998 999999864
No 427
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=92.11 E-value=0.16 Score=47.41 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=31.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCC--cEEEEccC
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGL--SVAVLERR 49 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~ 49 (531)
....+|+|||+|..|.+.|+.|+.+|+ +|.|+|.+
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 456899999999999999999999987 89999985
No 428
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=92.00 E-value=0.11 Score=50.91 Aligned_cols=50 Identities=12% Similarity=0.165 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCC----CcEEEcCeEEecCC
Q 048009 237 GSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLAD----GAQVHSSIVLSNAT 292 (531)
Q Consensus 237 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~----g~~~~ad~VV~aa~ 292 (531)
..+...+.+.++++|++++++++|++|+.+ . +++++ |+++.+|.||++++
T Consensus 200 ~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~---~---v~~~~~~~~g~~i~~D~vv~a~G 253 (430)
T 3h28_A 200 GASKRLVEDLFAERNIDWIANVAVKAIEPD---K---VIYEDLNGNTHEVPAKFTMFMPS 253 (430)
T ss_dssp TTHHHHHHHHHHHTTCEEECSCEEEEECSS---E---EEEECTTSCEEEEECSEEEEECE
T ss_pred hHHHHHHHHHHHHCCCEEEeCCEEEEEeCC---e---EEEEecCCCceEEeeeEEEECCC
Confidence 356777888899999999999999998642 2 44444 67899999999765
No 429
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=91.97 E-value=0.14 Score=51.14 Aligned_cols=33 Identities=33% Similarity=0.511 Sum_probs=30.8
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERR 49 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~ 49 (531)
..+++|||+|..|+-.|..|++.|.+|+|+++.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 219 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS 219 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 357999999999999999999999999999985
No 430
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.88 E-value=0.15 Score=48.80 Aligned_cols=34 Identities=24% Similarity=0.427 Sum_probs=31.3
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
.+|+|||||..|..+|+.+.+.|++|+++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 5799999999999999999999999999998764
No 431
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.87 E-value=0.14 Score=45.96 Aligned_cols=34 Identities=32% Similarity=0.524 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
..+|+|||+|-.|..+|..|++.|. +|+|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4789999999999999999999997 799999964
No 432
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.84 E-value=0.15 Score=48.77 Aligned_cols=34 Identities=29% Similarity=0.496 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
...|+|||+|..|+.+|..|+..|.+|+++++++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4789999999999999999999999999999864
No 433
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=91.75 E-value=0.16 Score=47.46 Aligned_cols=35 Identities=20% Similarity=0.297 Sum_probs=31.0
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCC--cEEEEccC
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGL--SVAVLERR 49 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~ 49 (531)
+...+|+|||+|-.|.+.|..|+.+|. +|.++|.+
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 345799999999999999999999884 89999975
No 434
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=91.64 E-value=0.12 Score=51.08 Aligned_cols=46 Identities=22% Similarity=0.273 Sum_probs=35.6
Q ss_pred cCcEEEcCcceeEEEecCCC-ceeEEEeC---------------CC--cEEEcCeEEecCChHh
Q 048009 250 AGAHIVTRAEVSQLMINDSG-RVNGVQLA---------------DG--AQVHSSIVLSNATPYK 295 (531)
Q Consensus 250 ~G~~i~~~~~V~~I~~~~~g-~~~~V~~~---------------~g--~~~~ad~VV~aa~~~~ 295 (531)
+|++|++++.+.+|..++++ ++.+|++. +| +++.+|.||+++|...
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p 333 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKS 333 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEEC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCC
Confidence 78999999999999865324 66666654 34 4789999999998665
No 435
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.63 E-value=0.12 Score=47.00 Aligned_cols=34 Identities=18% Similarity=0.246 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|+|||+|-+|.++|..|++.|.+|+|+.|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4679999999999999999999999999999863
No 436
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.59 E-value=0.16 Score=44.96 Aligned_cols=35 Identities=20% Similarity=0.262 Sum_probs=31.5
Q ss_pred CCCcEEEECC-ChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 16 KKWDALVIGG-GHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGa-GiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..++|+|.|| |..|...+..|+++|++|+++.|+.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4578999998 9999999999999999999999864
No 437
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=91.56 E-value=0.14 Score=46.36 Aligned_cols=30 Identities=27% Similarity=0.200 Sum_probs=28.3
Q ss_pred cEEEECCChhHHHHHHHHHHcCCcEEEEcc
Q 048009 19 DALVIGGGHNGLTAAAYLARAGLSVAVLER 48 (531)
Q Consensus 19 dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~ 48 (531)
+|.|||+|..|.+.|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 699999999999999999999999999866
No 438
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=91.50 E-value=0.098 Score=50.87 Aligned_cols=30 Identities=33% Similarity=0.458 Sum_probs=28.3
Q ss_pred CcEEEECCChhHHHHHHHHHH-cCCcEEEEc
Q 048009 18 WDALVIGGGHNGLTAAAYLAR-AGLSVAVLE 47 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~-~G~~V~v~E 47 (531)
++|+|||+|..|.+.|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 589999999999999999998 499999999
No 439
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=91.48 E-value=0.18 Score=46.58 Aligned_cols=34 Identities=29% Similarity=0.355 Sum_probs=31.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
+.+|.+||-|..|..-|..|.++||+|+++++++
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~ 36 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4589999999999999999999999999999864
No 440
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.47 E-value=0.17 Score=46.65 Aligned_cols=34 Identities=21% Similarity=0.172 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
..+|+|||+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4679999999999999999999997 899999863
No 441
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=91.47 E-value=0.16 Score=46.70 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=30.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHc--CCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARA--GLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~--G~~V~v~E~~~ 50 (531)
..+|.|||+|..|.+.|..|++. |++|+++++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 46899999999999999999998 68999999863
No 442
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=91.45 E-value=0.21 Score=47.13 Aligned_cols=34 Identities=29% Similarity=0.337 Sum_probs=31.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 4689999999999999999999999999999875
No 443
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=91.44 E-value=0.16 Score=46.32 Aligned_cols=34 Identities=24% Similarity=0.333 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|+|||+|..|.+.|..|.+.|.+|++++++.
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3679999999999999999999999999999874
No 444
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.32 E-value=0.19 Score=46.86 Aligned_cols=34 Identities=15% Similarity=0.340 Sum_probs=30.9
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCC--cEEEEccC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGL--SVAVLERR 49 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~ 49 (531)
...+|+|||+|..|.+.|+.|+..|+ ++.++|.+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 45789999999999999999999987 89999985
No 445
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=91.32 E-value=0.19 Score=43.85 Aligned_cols=33 Identities=21% Similarity=0.276 Sum_probs=30.0
Q ss_pred CcEEEECC-ChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGG-GHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGa-GiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|+|+|| |..|...+..|.++|++|+++.|+.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 36999996 9999999999999999999999864
No 446
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=91.27 E-value=0.19 Score=46.77 Aligned_cols=34 Identities=21% Similarity=0.389 Sum_probs=30.3
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC--cEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL--SVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~~ 50 (531)
..+|+|||+|..|.+.|+.|+..|. +|.++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 4689999999999999999998875 799999863
No 447
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=91.21 E-value=0.21 Score=44.79 Aligned_cols=32 Identities=22% Similarity=0.355 Sum_probs=30.1
Q ss_pred cEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 19 DALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 19 dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
+++|||+|-+|-+++..|.+.|. +|+|+.|+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999998 899999864
No 448
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.15 E-value=0.2 Score=48.07 Aligned_cols=34 Identities=35% Similarity=0.462 Sum_probs=31.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
...|+|||+|..|+.+|..|+..|.+|++++++.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 449
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=91.04 E-value=0.15 Score=48.77 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=28.6
Q ss_pred cccccccCCCCcEEEECCChhHHHHHHHHHHcCCcEEEEccC
Q 048009 8 STTSALKEKKWDALVIGGGHNGLTAAAYLARAGLSVAVLERR 49 (531)
Q Consensus 8 ~~~~~~~~~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~ 49 (531)
.....|+.++++|+|||||..|-.+|..|++. ++|+|.+++
T Consensus 7 ~~~~~~~g~~mkilvlGaG~vG~~~~~~L~~~-~~v~~~~~~ 47 (365)
T 3abi_A 7 HHHHHIEGRHMKVLILGAGNIGRAIAWDLKDE-FDVYIGDVN 47 (365)
T ss_dssp ---------CCEEEEECCSHHHHHHHHHHTTT-SEEEEEESC
T ss_pred cccccccCCccEEEEECCCHHHHHHHHHHhcC-CCeEEEEcC
Confidence 44555666788999999999999999999864 889998775
No 450
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=90.93 E-value=0.24 Score=42.64 Aligned_cols=33 Identities=36% Similarity=0.516 Sum_probs=30.6
Q ss_pred CcEEEECC-ChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGG-GHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGa-GiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|+|+|| |..|...+..|.++|++|+++.|+.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 57999999 9999999999999999999999864
No 451
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=90.92 E-value=0.26 Score=51.46 Aligned_cols=35 Identities=31% Similarity=0.320 Sum_probs=32.2
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
+-.+|.|||||..|-..|+.++..|++|+|+|.++
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 34689999999999999999999999999999864
No 452
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=90.85 E-value=0.25 Score=45.61 Aligned_cols=34 Identities=29% Similarity=0.412 Sum_probs=31.1
Q ss_pred CcEEEECC-ChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 18 WDALVIGG-GHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 18 ~dvvIIGa-GiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
++|+|.|| |..|-..+.+|.++||+|+++-|++.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 57999999 99999999999999999999988654
No 453
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=90.81 E-value=0.22 Score=46.00 Aligned_cols=33 Identities=27% Similarity=0.268 Sum_probs=29.8
Q ss_pred CCcEEEECCC-hhHHHHHHHHHHcCCcEEEEccC
Q 048009 17 KWDALVIGGG-HNGLTAAAYLARAGLSVAVLERR 49 (531)
Q Consensus 17 ~~dvvIIGaG-iaGL~aA~~L~~~G~~V~v~E~~ 49 (531)
..+|+|||+| +.|..+|..|...|.+|+|++++
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 4789999999 67999999999999999999775
No 454
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=90.78 E-value=0.23 Score=45.90 Aligned_cols=34 Identities=32% Similarity=0.371 Sum_probs=31.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|.|||+|..|..+|..|...|.+|++++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4689999999999999999999999999999864
No 455
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=90.74 E-value=0.25 Score=44.71 Aligned_cols=32 Identities=44% Similarity=0.529 Sum_probs=30.3
Q ss_pred cEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 19 DALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 19 dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
+|+|||+|-.|.+.|..|.+.|.+|++++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 89999999999999999999999999999864
No 456
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=90.57 E-value=0.24 Score=43.36 Aligned_cols=33 Identities=27% Similarity=0.350 Sum_probs=29.9
Q ss_pred CcEEEECC-ChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGG-GHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGa-GiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|+|+|| |..|...+..|.++|++|.++.|+.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 36999998 9999999999999999999998853
No 457
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=90.54 E-value=0.19 Score=45.61 Aligned_cols=34 Identities=21% Similarity=0.192 Sum_probs=31.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
..+|+|||+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4689999999999999999999998 899999874
No 458
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=90.44 E-value=0.15 Score=49.49 Aligned_cols=34 Identities=35% Similarity=0.638 Sum_probs=30.9
Q ss_pred CcEEEECCChhHHHHHHHHHHcC--CcEEEEccCCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAG--LSVAVLERRHV 51 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G--~~V~v~E~~~~ 51 (531)
.+|||||||.+|++||.+|++.+ .+|+|+|+++.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 58999999999999999999876 58999999875
No 459
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=90.37 E-value=0.27 Score=45.32 Aligned_cols=34 Identities=29% Similarity=0.349 Sum_probs=31.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
...|.|||+|..|..+|..|...|.+|++++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999864
No 460
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=90.26 E-value=0.21 Score=49.81 Aligned_cols=36 Identities=19% Similarity=0.233 Sum_probs=31.3
Q ss_pred CCCcEEEECCChhHHH-HHHHHHHcCCcEEEEccCCC
Q 048009 16 KKWDALVIGGGHNGLT-AAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~-aA~~L~~~G~~V~v~E~~~~ 51 (531)
...+|.|||.|-+|++ +|..|.++|++|++.|....
T Consensus 21 ~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~ 57 (494)
T 4hv4_A 21 RVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN 57 (494)
T ss_dssp -CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC
T ss_pred cCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC
Confidence 3468999999999997 69999999999999998643
No 461
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.23 E-value=0.11 Score=46.02 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=30.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|+|||+|-.|...|..|.+.|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 4679999999999999999999999 999999753
No 462
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=90.12 E-value=0.23 Score=46.15 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=30.1
Q ss_pred CcEEEECC-ChhHHHHHHHHHHcC--CcEEEEccCC
Q 048009 18 WDALVIGG-GHNGLTAAAYLARAG--LSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGa-GiaGL~aA~~L~~~G--~~V~v~E~~~ 50 (531)
++|+|||| |..|.+.|..|++.| .+|.++|...
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 47999998 999999999999988 7899999875
No 463
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.06 E-value=0.24 Score=45.38 Aligned_cols=33 Identities=21% Similarity=0.175 Sum_probs=30.9
Q ss_pred CcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
++|+|+|||..|...+..|.++|++|+++.|++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 689999999999999999999999999998864
No 464
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=90.05 E-value=0.2 Score=47.35 Aligned_cols=33 Identities=18% Similarity=0.358 Sum_probs=30.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|+|||+|..|+-+|..|++.| +|++++++.
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 468999999999999999999998 699999874
No 465
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.99 E-value=0.23 Score=48.90 Aligned_cols=34 Identities=29% Similarity=0.416 Sum_probs=31.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|+|||+|-.|...|..|.+.|.+|+|++...
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 5789999999999999999999999999999853
No 466
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=89.92 E-value=0.29 Score=45.36 Aligned_cols=32 Identities=22% Similarity=0.444 Sum_probs=29.3
Q ss_pred cEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 19 DALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 19 dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
+|+|||+|..|.+.|+.|+..|+ +|.++|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 58999999999999999999888 699999864
No 467
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=89.33 E-value=0.061 Score=46.46 Aligned_cols=36 Identities=22% Similarity=0.243 Sum_probs=32.1
Q ss_pred CCCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 16 KKWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 16 ~~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..++|.|||+|..|.+.|..|.+.|++|++++++..
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 346899999999999999999999999999988653
No 468
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=89.75 E-value=0.32 Score=45.46 Aligned_cols=35 Identities=14% Similarity=0.341 Sum_probs=31.0
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCC--cEEEEccC
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGL--SVAVLERR 49 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~ 49 (531)
.++.+|+|||+|-.|.+.|+.|+..++ ++.++|.+
T Consensus 7 ~~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 345899999999999999999999885 79999985
No 469
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=89.64 E-value=0.34 Score=44.09 Aligned_cols=34 Identities=21% Similarity=0.259 Sum_probs=31.0
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
..+|+|||+|-+|-++|+.|++.|. +|+|+.|+.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 4689999999999999999999998 899998864
No 470
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=89.56 E-value=0.37 Score=43.62 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
..+++|||+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 4689999999999999999999995 899998863
No 471
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.49 E-value=0.26 Score=45.20 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=29.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERR 49 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~ 49 (531)
...|+|+|+|-.|.++|..|++.| +|+|+.|+
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 357999999999999999999999 99999885
No 472
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=89.38 E-value=0.32 Score=47.65 Aligned_cols=34 Identities=38% Similarity=0.300 Sum_probs=31.2
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
...|+|+|+|-.|.++|..|+..|.+|+++|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4679999999999999999999999999999853
No 473
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=89.31 E-value=0.4 Score=43.72 Aligned_cols=34 Identities=21% Similarity=0.241 Sum_probs=30.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
..+|+|+|+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 4689999999999999999999998 699998863
No 474
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=89.19 E-value=0.26 Score=46.18 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=30.2
Q ss_pred CCCcEEEECC-ChhHHHHHHHHHHcCC-------cEEEEccC
Q 048009 16 KKWDALVIGG-GHNGLTAAAYLARAGL-------SVAVLERR 49 (531)
Q Consensus 16 ~~~dvvIIGa-GiaGL~aA~~L~~~G~-------~V~v~E~~ 49 (531)
+.++|+|||| |..|.+.+..|..+|+ +|.++|..
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 3478999998 9999999999999885 79999886
No 475
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=89.17 E-value=0.43 Score=44.83 Aligned_cols=35 Identities=17% Similarity=0.111 Sum_probs=32.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|.|||.|..|...|..|+..|++|++++++..
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 46799999999999999999999999999998753
No 476
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=89.11 E-value=0.29 Score=51.20 Aligned_cols=36 Identities=19% Similarity=0.175 Sum_probs=32.7
Q ss_pred CcEEEEC--CChhHHHHHHHHHHcCCcEEEEccCCCCC
Q 048009 18 WDALVIG--GGHNGLTAAAYLARAGLSVAVLERRHVIG 53 (531)
Q Consensus 18 ~dvvIIG--aGiaGL~aA~~L~~~G~~V~v~E~~~~~G 53 (531)
.+|+||| +|..|+-+|..|++.|.+|+++++.+.+.
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~ 561 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVS 561 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccc
Confidence 5699999 99999999999999999999999987643
No 477
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=89.10 E-value=0.39 Score=44.46 Aligned_cols=33 Identities=15% Similarity=0.303 Sum_probs=30.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC-cEEEEccC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL-SVAVLERR 49 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~ 49 (531)
..+++|+|+|-+|.++|..|++.|. +|+|+.|+
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 4689999999999999999999998 89999886
No 478
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=89.08 E-value=0.39 Score=45.44 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERR 49 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~ 49 (531)
...|+|+|+|-.|..+|..|.+.|.+|++.|++
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 467999999999999999999999999999975
No 479
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=88.96 E-value=0.4 Score=45.33 Aligned_cols=34 Identities=26% Similarity=0.224 Sum_probs=31.1
Q ss_pred CCcEEEECC-ChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGG-GHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGa-GiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|+|+|| |..|...+..|.++|++|.++.|+.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 568999999 9999999999999999999999975
No 480
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=88.94 E-value=0.37 Score=43.87 Aligned_cols=34 Identities=24% Similarity=0.210 Sum_probs=30.7
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC-cEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL-SVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~~ 50 (531)
..+++|||+|-+|.+.|..|++.|. +|+|+.|+.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 4689999999999999999999996 899998864
No 481
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=88.91 E-value=0.42 Score=43.30 Aligned_cols=33 Identities=18% Similarity=0.329 Sum_probs=30.4
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC-cEEEEccC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL-SVAVLERR 49 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~-~V~v~E~~ 49 (531)
..+|+|||+|-+|-++|+.|++.|. +|+|+.|+
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4689999999999999999999996 79999886
No 482
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=88.91 E-value=0.36 Score=44.96 Aligned_cols=33 Identities=18% Similarity=0.376 Sum_probs=30.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCC--cEEEEccC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGL--SVAVLERR 49 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~--~V~v~E~~ 49 (531)
+.+|+|||+|-.|.+.|+.|+..++ ++.++|.+
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 4799999999999999999999886 79999985
No 483
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=88.89 E-value=0.29 Score=45.82 Aligned_cols=35 Identities=11% Similarity=0.206 Sum_probs=30.8
Q ss_pred CCcEEEEC-CChhHHHHHHHHHHcC--CcEEEEccCCC
Q 048009 17 KWDALVIG-GGHNGLTAAAYLARAG--LSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIG-aGiaGL~aA~~L~~~G--~~V~v~E~~~~ 51 (531)
.++|+||| +|..|.+.|..|+++| .+|.++|....
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~ 45 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA 45 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc
Confidence 46899999 7999999999999998 78999997553
No 484
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=88.82 E-value=0.28 Score=48.40 Aligned_cols=44 Identities=9% Similarity=0.078 Sum_probs=33.7
Q ss_pred cCcEEEcCcceeEEEecCCCceeEEEeC----------------CC--cEEEcCeEEecCChHh
Q 048009 250 AGAHIVTRAEVSQLMINDSGRVNGVQLA----------------DG--AQVHSSIVLSNATPYK 295 (531)
Q Consensus 250 ~G~~i~~~~~V~~I~~~~~g~~~~V~~~----------------~g--~~~~ad~VV~aa~~~~ 295 (531)
+|++|++++.+++|..+ +++.+|++. +| +++.||.||+++|...
T Consensus 265 ~gv~i~~~~~~~~i~~~--~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK--RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp EEEEEECSEEEEEEECS--SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred ceEEEEeCCCCeEEecC--CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 78999999999999754 455556554 34 3689999999988654
No 485
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=88.75 E-value=0.45 Score=43.26 Aligned_cols=33 Identities=24% Similarity=0.328 Sum_probs=29.6
Q ss_pred CCcEEEECC-ChhHHHHHHHHHHcCCcEEEEccC
Q 048009 17 KWDALVIGG-GHNGLTAAAYLARAGLSVAVLERR 49 (531)
Q Consensus 17 ~~dvvIIGa-GiaGL~aA~~L~~~G~~V~v~E~~ 49 (531)
..+|+|||. |+.|..+|..|.+.|..|+|+.++
T Consensus 165 Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 478999995 568999999999999999999874
No 486
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=88.75 E-value=0.43 Score=44.75 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=31.9
Q ss_pred CCCCcEEEECC-ChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 15 EKKWDALVIGG-GHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 15 ~~~~dvvIIGa-GiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
...+.|+|.|| |..|...+..|+++|++|+++.++.
T Consensus 18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34578999998 9999999999999999999999854
No 487
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=88.75 E-value=0.34 Score=47.57 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=30.9
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|+|+|+|..|.+.|..|++.|++|++++++.
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL 36 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCH
Confidence 4679999999999999999999999999999863
No 488
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=88.70 E-value=0.32 Score=46.78 Aligned_cols=34 Identities=29% Similarity=0.204 Sum_probs=31.6
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
...|+|||.|..|..+|..|+..|.+|+++|+++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4689999999999999999999999999999864
No 489
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=88.64 E-value=0.52 Score=42.87 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=30.0
Q ss_pred CCcEEEECCC-hhHHHHHHHHHHcCCcEEEEccC
Q 048009 17 KWDALVIGGG-HNGLTAAAYLARAGLSVAVLERR 49 (531)
Q Consensus 17 ~~dvvIIGaG-iaGL~aA~~L~~~G~~V~v~E~~ 49 (531)
..+|+|||+| +.|..+|..|...|..|+|+.+.
T Consensus 165 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 165 GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 5789999999 68999999999999999999754
No 490
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=88.51 E-value=0.46 Score=42.62 Aligned_cols=33 Identities=12% Similarity=0.158 Sum_probs=29.8
Q ss_pred CCcEEEECCC-hhHHHHHHHHHHcCCcEEEEccC
Q 048009 17 KWDALVIGGG-HNGLTAAAYLARAGLSVAVLERR 49 (531)
Q Consensus 17 ~~dvvIIGaG-iaGL~aA~~L~~~G~~V~v~E~~ 49 (531)
..+|+|||+| +.|..+|..|.+.|..|+++.+.
T Consensus 150 Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 150 ENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp SCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4789999976 79999999999999999999864
No 491
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=88.47 E-value=0.29 Score=48.97 Aligned_cols=35 Identities=26% Similarity=0.493 Sum_probs=30.0
Q ss_pred CcEEEECCChhHHHHHHHHHHc--------------CCcEEEEccCCCC
Q 048009 18 WDALVIGGGHNGLTAAAYLARA--------------GLSVAVLERRHVI 52 (531)
Q Consensus 18 ~dvvIIGaGiaGL~aA~~L~~~--------------G~~V~v~E~~~~~ 52 (531)
..++|||||..|+-.|..|++. ..+|+|+|+.+++
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~i 266 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIV 266 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSS
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccc
Confidence 4699999999999999998864 2679999998875
No 492
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=88.42 E-value=0.49 Score=43.99 Aligned_cols=35 Identities=37% Similarity=0.470 Sum_probs=32.2
Q ss_pred CCcEEEECC-ChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGG-GHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGa-GiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
+.+|+|.|| |..|...+..|.++|++|+++.|+..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 478999999 99999999999999999999998764
No 493
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=88.39 E-value=0.39 Score=47.43 Aligned_cols=34 Identities=26% Similarity=0.260 Sum_probs=31.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
...|+|||.|..|..+|..|+..|.+|+++|+++
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 494
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=88.34 E-value=0.56 Score=45.91 Aligned_cols=56 Identities=13% Similarity=0.154 Sum_probs=41.2
Q ss_pred chHHHHHHHHHHHHHcCcEEEcCcceeEEEecCCCceeEEEeCCC--cEEEcCeEEecCChH
Q 048009 235 GMGSVSMAIGSAAREAGAHIVTRAEVSQLMINDSGRVNGVQLADG--AQVHSSIVLSNATPY 294 (531)
Q Consensus 235 G~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~g~~~~V~~~~g--~~~~ad~VV~aa~~~ 294 (531)
+.....+.+.+.++++|++++++++|++|+. +++. +...+| +++.+|.||+++|..
T Consensus 198 ~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~---~~~~-~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 198 GIGASKRLVEDLFAERNIDWIANVAVKAIEP---DKVI-YEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp CSTTHHHHHHHHHHHTTCEEECSCEEEEECS---SEEE-EECTTSCEEEEECSEEEEECEEE
T ss_pred hhHHHHHHHHHHHHhCCeEEEeCceEEEEeC---CceE-EEeeCCCceEeecceEEEeccCC
Confidence 3445667778888999999999999999853 3332 444444 478999999987743
No 495
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=88.27 E-value=0.44 Score=44.64 Aligned_cols=34 Identities=24% Similarity=0.234 Sum_probs=31.5
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
..+|.|||.|..|...|..|+..|++|++++++.
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 188 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQ 188 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4689999999999999999999999999999864
No 496
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=88.24 E-value=0.35 Score=42.41 Aligned_cols=34 Identities=21% Similarity=0.271 Sum_probs=31.0
Q ss_pred CCcEEEECC-ChhHHHHHHHHHHcCCcEEEEccCC
Q 048009 17 KWDALVIGG-GHNGLTAAAYLARAGLSVAVLERRH 50 (531)
Q Consensus 17 ~~dvvIIGa-GiaGL~aA~~L~~~G~~V~v~E~~~ 50 (531)
+++|+|+|| |..|...+..|.++|++|.++.|+.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 368999996 9999999999999999999999974
No 497
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=88.23 E-value=0.46 Score=44.81 Aligned_cols=37 Identities=27% Similarity=0.294 Sum_probs=31.0
Q ss_pred CCCCcEEEECC-ChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 15 EKKWDALVIGG-GHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 15 ~~~~dvvIIGa-GiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
....+|+|.|| |..|...+..|.++|++|+++.++..
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 34578999999 99999999999999999999998764
No 498
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=88.17 E-value=0.58 Score=40.81 Aligned_cols=32 Identities=16% Similarity=0.227 Sum_probs=28.8
Q ss_pred cEEEECC-ChhHHHHHHHHH-HcCCcEEEEccCC
Q 048009 19 DALVIGG-GHNGLTAAAYLA-RAGLSVAVLERRH 50 (531)
Q Consensus 19 dvvIIGa-GiaGL~aA~~L~-~~G~~V~v~E~~~ 50 (531)
.|+|+|| |-.|...|..|+ ++|++|+++.|+.
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 3999996 899999999999 8999999999864
No 499
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=87.97 E-value=0.58 Score=43.79 Aligned_cols=35 Identities=20% Similarity=0.192 Sum_probs=32.1
Q ss_pred CCcEEEECCChhHHHHHHHHHHcCCcEEEEccCCC
Q 048009 17 KWDALVIGGGHNGLTAAAYLARAGLSVAVLERRHV 51 (531)
Q Consensus 17 ~~dvvIIGaGiaGL~aA~~L~~~G~~V~v~E~~~~ 51 (531)
..+|.|||.|..|...|..|+..|++|++++++..
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~ 198 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKK 198 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCch
Confidence 46799999999999999999999999999998754
No 500
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=87.87 E-value=0.26 Score=47.07 Aligned_cols=38 Identities=32% Similarity=0.316 Sum_probs=31.7
Q ss_pred CCCCcEEEECCChhHHHHHHHHHHcCC--------cEEEEccCCCC
Q 048009 15 EKKWDALVIGGGHNGLTAAAYLARAGL--------SVAVLERRHVI 52 (531)
Q Consensus 15 ~~~~dvvIIGaGiaGL~aA~~L~~~G~--------~V~v~E~~~~~ 52 (531)
.+..+|+|||||.=|-+.|..|++.|+ +|+++-+++.+
T Consensus 32 ~~p~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~ 77 (391)
T 4fgw_A 32 EKPFKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEI 77 (391)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBS
T ss_pred CCCCeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHh
Confidence 345799999999999999999999875 49999887653
Done!