BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048010
(320 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 297 bits (760), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 168/313 (53%), Positives = 208/313 (66%), Gaps = 28/313 (8%)
Query: 1 MLLVAHALPLSLAQRSPEPPGSVDPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCS 60
LL+ + L+ +Q P P PY+ + SP++A+I+V+LI+ALFFMGFFSIY RHCS
Sbjct: 17 FLLILSSADLAASQSQPGPTN--QPYNYGRLSPAMAVIVVILIAALFFMGFFSIYFRHCS 74
Query: 61 DSSNSVIRPAGAGGNRSR---RGAARGLDREVIDTFPTFVYSEVKTLKVGKGALECAVCL 117
++ + PAG G RSR AARGLD V++TFPTF+YS+VKT K+GKG LECA+CL
Sbjct: 75 GVPDAGVSPAG--GARSRATVNAAARGLDVSVVETFPTFLYSDVKTQKLGKGELECAICL 132
Query: 118 NEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEV 177
NEFEDDETLRL+PKCDHVFHP CIDAWLE+H TCPVCR+NLA + E + E G +E
Sbjct: 133 NEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQVAEG--ESVEPGGTEP 190
Query: 178 DLEAQNDAAVAAETPQETQPQAQCSQPPEPQVISGNFANQTLNRNRTRGSRSGRPRKFPR 237
DLE Q V P T P + Q +V S ++ R KF R
Sbjct: 191 DLELQQ--VVVNPEPVVTAPVPE--QLVTSEVDSRRLPGVPVDLKRV---------KFSR 237
Query: 238 SHSTGHSLVQPGEDTERFTLRLPVDVRKQIM-NRELNRSNSLVVLPREASSRRGYRPGGG 296
SH+TGHS+VQPGE TERFTLRLP DVRK+IM + +LNR+NSL+VLPR SSRRG +P
Sbjct: 238 SHTTGHSVVQPGECTERFTLRLPEDVRKRIMKDWKLNRTNSLLVLPRGGSSRRG-KP--- 293
Query: 297 GEGSSRGRNTRWL 309
SR R+ RWL
Sbjct: 294 -IDRSRARSDRWL 305
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 270 bits (690), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/290 (52%), Positives = 190/290 (65%), Gaps = 52/290 (17%)
Query: 24 DPYS-NMKFSPSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPAGAGGNR-SRRGA 81
DPY+ + SP++A+++VV+I+ALFFMGFF++YIRHC+ + + + PAG R +
Sbjct: 33 DPYAYSGSLSPAMAVVVVVVIAALFFMGFFTVYIRHCTGAVDGSVTPAGGARRRVTNATV 92
Query: 82 ARGLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECI 141
ARGLD E I+TFPTFVYSEVKT K+GKGALECA+CLNEFEDDETLRL+PKCDHVFHP CI
Sbjct: 93 ARGLDAETIETFPTFVYSEVKTQKIGKGALECAICLNEFEDDETLRLLPKCDHVFHPHCI 152
Query: 142 DAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQNDAAVAAETPQETQPQAQC 201
AWL+ H TCPVCR+NLA E TP+P + E DLEAQ +AV
Sbjct: 153 GAWLQGHVTCPVCRTNLA----EQTPEPEVV--VETDLEAQQQSAV-------------- 192
Query: 202 SQPPEPQVISGNFANQTLNRNRTRGSRSGRPR-KFPRSHSTGHSLVQPGEDTERFTLRLP 260
P P V PR KFPRSH+TGHS+V PGE T+RFTLR+P
Sbjct: 193 ---PVPVV--------------------ELPRVKFPRSHTTGHSVVLPGESTDRFTLRVP 229
Query: 261 VDVRKQIM-NRELNRSNSLVVLPREASSRRGYRPGGGGEGSSRGRNTRWL 309
++RK+IM N +LNRSNS+ VLPR SSR G + SR ++ RWL
Sbjct: 230 EELRKKIMANWKLNRSNSVFVLPRGGSSRSGKQ-----VDRSRAKSDRWL 274
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 205 bits (522), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/278 (43%), Positives = 160/278 (57%), Gaps = 33/278 (11%)
Query: 30 KFSPSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVI--RPAGAGGN-RSRRGAARGLD 86
+F P++AI+++VL+S FF+GFFS+YIR C + + P AG + R ARGLD
Sbjct: 58 RFDPTMAILMIVLVSVFFFLGFFSVYIRRCLERVMGMDYGNPNDAGNWLATNRQQARGLD 117
Query: 87 REVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLE 146
+I+TFPTF YS VKTL++GK ALEC+VCLNEFEDDETLRLIPKC HVFHP CIDAWL
Sbjct: 118 ASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLR 177
Query: 147 SHTTCPVCRSNLASEPGET--TPQPSELGSSEVDLEAQNDAAVAAETPQETQPQA---QC 201
SHTTCP+CR++L PGE+ + Q L + + D + +P ++ C
Sbjct: 178 SHTTCPLCRADLIPVPGESIVSIQIPGLVNDPPGSDPNGDRIRSLGSPDARLIESVALTC 237
Query: 202 SQ--PPEPQVISGNFANQTLNRNRTRGSRSGRPRKFPRSHSTGHSLVQPGEDTERFTLRL 259
+Q P N A N +RT Q E+ +RFTLRL
Sbjct: 238 NQSMPRRSMSTGWNLAGMFTNSDRTG---------------------QHSENLDRFTLRL 276
Query: 260 PVDVRKQIMNRELNRSNSLVVLPREASSRRGYRPGGGG 297
P D+ +++N L++ + V LP+ SS RGYR G G
Sbjct: 277 PQDIHNKLVNPNLSKVH--VALPQVMSSTRGYRTGSLG 312
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/277 (43%), Positives = 159/277 (57%), Gaps = 14/277 (5%)
Query: 24 DPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPAGAGGNRSRRGAAR 83
D FSP+ AII++VL+S F +G S+Y+R C + + G G + R
Sbjct: 28 DDEGRTSFSPTTAIIMIVLVSVFFALGCISVYMRRCLQHALGMDSGGGPGNWLNVRQTTE 87
Query: 84 -GLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECID 142
GLD VI+TFPTF YS VKTL++GK ALEC VCLNEFEDDETLRLIP+C HVFHP CID
Sbjct: 88 PGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCID 147
Query: 143 AWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQNDAAVAAETPQETQPQAQCS 202
AWL S TTCP+CR+NL PGE+ SSE+ A+ + TP + + +
Sbjct: 148 AWLRSQTTCPLCRANLVPVPGESV-------SSEIPGLARETGQNSLRTPIDDNRKRVLT 200
Query: 203 QPPEPQVISGNFANQTLNRNRTRGSRSGRPRKFPRSHSTGHSLVQPGEDTERFTLRLPVD 262
P E + S T N++ R S S K +S S QP E+ +R+TLRLP +
Sbjct: 201 SPDERLIDS---VAWTGNQSMPRKSMS-TGWKLAELYSPASSPGQPEENLDRYTLRLPQE 256
Query: 263 VRKQIMNRELNR--SNSLVVLPREASSRRGYRPGGGG 297
+ Q++N L + S + LP+E SS RG+R G G
Sbjct: 257 IHDQLVNSSLGKQGSKGQLALPQERSSVRGFRTGSLG 293
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 195 bits (495), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/278 (41%), Positives = 162/278 (58%), Gaps = 38/278 (13%)
Query: 36 AIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPAGAGGNRSRRGAARGLDREVIDTFPT 95
+II +V+++ +G S + HC + AG + A RGL++EVI++FPT
Sbjct: 50 SIIAIVVLAIFISLGMVSCCL-HCIFYREEI---GAAGQDVLHSRARRGLEKEVIESFPT 105
Query: 96 FVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCR 155
F+YSEVK LK+GKG +ECA+CL+EFED ETLR +P C H FH CID WL S +TCPVCR
Sbjct: 106 FLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCR 165
Query: 156 SNLASEPGETTPQPSELGSSEVDLEAQNDAAVAAETPQETQPQAQCSQPPEPQVISGNFA 215
+NL+ +PGE+ P + +D+E + P + ++GN
Sbjct: 166 ANLSLKPGESYPYLN------MDVET-----------------GGVQKLPNERSLTGN-- 200
Query: 216 NQTLNRNRTRGSRSGRPRK---FPRSHSTGHSLVQP-GEDTERFTLRLPVDVRKQIMNRE 271
R+R+ G S PRSHSTGHSLVQ GE+ +RFTL+LP +V++Q+++
Sbjct: 201 -SVTTRSRSTGLLSSWRMAEIFVPRSHSTGHSLVQQLGENLDRFTLQLPEEVQRQLVSLN 259
Query: 272 LNRSNSLVVLPREASSRRGYRPGGGGE---GSSRGRNT 306
L R S +VLP+ SSR+GYR G G G S+GR T
Sbjct: 260 LIR-RSHIVLPQAVSSRQGYRSGSVGSERGGFSQGRQT 296
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 143/230 (62%), Gaps = 20/230 (8%)
Query: 83 RGLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECID 142
RG+D++VI++FP F+YSEVK K+G G +ECA+CL EFED+E LR +P C H FH CID
Sbjct: 90 RGIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCID 149
Query: 143 AWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQNDAAVAAETPQETQPQAQCS 202
WL S +TCPVCR+NL+ + G++ P PS +D+E N E+P E
Sbjct: 150 EWLSSRSTCPVCRANLSLKSGDSFPHPS------MDVETGNAQRGVQESPDERSLTGS-- 201
Query: 203 QPPEPQVISGNFANQTLNRNRTRGSRSGR--PRKF-PRSHSTGHSLVQPGEDTERFTLRL 259
V N AN T R+R+ G S P F PRSHSTGHSLVQP ++ +RFTL+L
Sbjct: 202 -----SVTCNNNANYTTPRSRSTGLLSSWHVPELFLPRSHSTGHSLVQPCQNIDRFTLQL 256
Query: 260 PVDVRKQIMNRELNRSNSLVVLPREASSRRGYRPGGGGE---GSSRGRNT 306
P +V++Q+++ L + S + LPR SSR+GYR G G G S+GR T
Sbjct: 257 PEEVQRQLVSLNLIK-RSHIALPRARSSRQGYRSGSVGNERTGFSQGRQT 305
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 191 bits (485), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 105/243 (43%), Positives = 145/243 (59%), Gaps = 15/243 (6%)
Query: 35 LAIIIVVLISALFFMGFFSIYIRHCSD--SSNSVIRPAGAGGN----RSRRGAARGLDRE 88
+ ++I VL +FFM F SI+ R + S +S+ R A R RR ARGLD E
Sbjct: 51 VVVVITVLFLVIFFMVFGSIFCRRSNAQFSRSSIFRSTDADAESQVVRIRRLTARGLDAE 110
Query: 89 VIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESH 148
I+TFPTF+YSEVK +++GKG +ECAVCL EFEDDETLRL+P C HVFH +C+D WL H
Sbjct: 111 AIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEH 170
Query: 149 TTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQNDAAVAAETPQETQPQAQCSQPPEPQ 208
+TCP+CR++L Q + S + +++ T E + S
Sbjct: 171 STCPLCRADLVLN------QQGDDDDSTESYSGTDPGTISSSTDPERGMVLESSDAHLLD 224
Query: 209 VISGNFANQTLNRNRTRGSRSGRPRK--FPRSHSTGHSLVQPGEDTERFTLRLPVDVRKQ 266
++ + +N T R+++ G S + FPRSHSTGHSL+QP + +RFTLRLP DVR+Q
Sbjct: 225 AVTWSNSNIT-PRSKSTGLSSWQITGILFPRSHSTGHSLIQPAGNLDRFTLRLPDDVRRQ 283
Query: 267 IMN 269
+M
Sbjct: 284 LMK 286
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 183 bits (464), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/310 (40%), Positives = 157/310 (50%), Gaps = 50/310 (16%)
Query: 16 SPEPPGSVDPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCS----DSSNSVIRPAG 71
SP PP ++ PS + VL++ F G S+YIRHC+ DSS R
Sbjct: 32 SPSPPDLQTGHT-----PSKTTVFAVLVTLFFLTGLLSVYIRHCARSNPDSSTRYFRNRA 86
Query: 72 AGGNRSRRGAARGLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPK 131
G+ SRRG GLD V+++FP F YS VK K+G LECA+CLNE ED ET+RL+P
Sbjct: 87 NDGS-SRRG---GLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPI 142
Query: 132 CDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQNDAAVAAET 191
C+H+FH +CID WL SH TCPVCRSNL ++ + P + G V L A D V
Sbjct: 143 CNHLFHIDCIDTWLYSHATCPVCRSNLTAKSNK--PGDEDDG---VPLAAMRDHVVV--- 194
Query: 192 PQETQPQAQCSQPPEPQVISGNFANQTLNRNRTRGSRSGRPRKFPRSHSTGHSLVQPGED 251
ET A+ ISG KFPRS+STGHS+ + +
Sbjct: 195 DIETVEVAKSHHRRLSSEISG---------------------KFPRSNSTGHSMDRFSDG 233
Query: 252 TERFTLRLPVDVRKQIM---NRELNRSNSL-VVLPREASSRRGYRPGGG-GEGSSRGRNT 306
TERFTLRLP DV+ ++M R L R+ S V L E R G G G+ GR
Sbjct: 234 TERFTLRLPDDVKMRLMAVKGRRLKRTRSFDVDLTAEHYCRSGEESSNTIGSGAKSGRVN 293
Query: 307 ---RWLGPVF 313
RW +F
Sbjct: 294 WPDRWGLTLF 303
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 179 bits (453), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 165/302 (54%), Gaps = 27/302 (8%)
Query: 18 EPPGSVDPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCSDSS----NSVIRPAGAG 73
+P + PY + + A+II +L+ L F +++S +S G G
Sbjct: 29 QPRTTAPPYIAQRPNQVPAVIIAMLMFTLLFSMLACCVCYKYTNTSPHGTSSDTEEGGHG 88
Query: 74 GNRSRRGAARGLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCD 133
R +RGL ++VI++FP+F+YS+VK LK+GKG +ECA+CLNEFED+ETLRL+P C
Sbjct: 89 EVAFTRRTSRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCS 148
Query: 134 HVFHPECIDAWLESHTTCPVCRSNLASEPG----ETTPQPSELGSSEVDLEAQNDAAVAA 189
H FH CID WL S +TCPVCR++L +PG P + ++DLE
Sbjct: 149 HAFHASCIDVWLSSRSTCPVCRASLPPKPGSDQNSLYPFIRPHDNQDMDLENVTARRSVL 208
Query: 190 ETPQETQPQAQCSQPPEPQVISGNFANQTLNRNRTRGSRSGRPRK--FPRSHSTGHSLVQ 247
E+P + + + S S N T R+R+ G + R + FPRSHSTGHSLV
Sbjct: 209 ESP-DVRLLDRLSW-------SNNTGANTPPRSRSTGLSNWRITELLFPRSHSTGHSLVP 260
Query: 248 PGEDTERFTLRLPVDVRKQIMNRELNRSNSLVVLPREASSRRGYRPGG-GGEGSSRGRNT 306
E+ +RFTL+LP +VR+Q+ + + LP+ SSR GYR G G E +G+
Sbjct: 261 RVENLDRFTLQLPEEVRRQL--------SHMKTLPQARSSREGYRSGSVGSERRGKGKEK 312
Query: 307 RW 308
+
Sbjct: 313 EF 314
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 167 bits (424), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/267 (37%), Positives = 140/267 (52%), Gaps = 51/267 (19%)
Query: 23 VDPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCSDS--SNSVIRPAGAGGNRSRRG 80
V P + +K S ++I +++ A+F +G S+ R S S I P SR
Sbjct: 2 VQPGTEIKASDLTLLVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTS 61
Query: 81 --AARGLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHP 138
A RGLD +I++FPTF+YSEVK ++G G +ECAVC+ EFED ETLRL+P+C HVFH
Sbjct: 62 ITAVRGLDEAIINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHA 121
Query: 139 ECIDAWLESHTTCPVCRSNLASEPGETT---PQPSELGSSEVDLEAQNDAAVAAETPQET 195
+C+ WL H+TCP+CR +L +PGE + P+P + S+ L
Sbjct: 122 DCVSVWLSDHSTCPLCRVDLCLQPGERSYLNPEPDLVESTNSHL---------------- 165
Query: 196 QPQAQCSQPPEPQVISGNFANQTLNRNRTRGSRSGRPR---------KFPRSHSTGHSLV 246
F T NR R SRS R RSHSTGHS+V
Sbjct: 166 ------------------FDGVTWT-NRNRPSRSWSTRLSQCRVSQILISRSHSTGHSVV 206
Query: 247 QPGEDTERFTLRLPVDVRKQIMNRELN 273
QP ++ +RFTLRLP +VR+Q+ + ++
Sbjct: 207 QPLDNLDRFTLRLPEEVRRQLTKKTVD 233
>sp|O49691|ATL29_ARATH RING-H2 finger protein ATL29 OS=Arabidopsis thaliana GN=ATL29 PE=3
SV=1
Length = 289
Score = 149 bits (377), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 146/302 (48%), Gaps = 34/302 (11%)
Query: 16 SPEPPGSVDPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCS-DSSNSVIRPAGAGG 74
+P+PP +P L +I+ V++ FF+GFF++Y C D+ R G
Sbjct: 10 APQPP------QQHYVTPPLTVILTVILLVFFFIGFFTLYFCKCFLDTMVQAWRLHHGGD 63
Query: 75 NRSRRGAAR--------GLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETL 126
S + GL+ +I++FPTF YS VK L+ K LECA+CL EF+ D L
Sbjct: 64 TVSDNPLQQPEAPPVNPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVL 123
Query: 127 RLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQNDAA 186
RL+ C HVFH ECID W ESH TCPVCR +L P +P+ + +D+ Q +
Sbjct: 124 RLLTTCYHVFHQECIDLWFESHRTCPVCRRDLDPPPPPENTKPT-VDEMIIDV-IQETSD 181
Query: 187 VAAETPQETQPQAQCSQPPEPQVISGNFANQTLNRNRTRGSRSGRPRKFPRSHSTGHSLV 246
+ Q Q P S Q L P KF RSHSTGHS+V
Sbjct: 182 DEEDDHHRQQTTTQIDTWPSSGQTSSIKKEQNL------------PEKFSRSHSTGHSIV 229
Query: 247 QPG-EDTERFTLRLPVDVRKQIMNRELNRSNSLVVLPREASSRRGY--RPGGGGEGSSRG 303
+ E+ +++TLRLP V+ ++ R +++ S V E RGY R G G ++
Sbjct: 230 RNKPEEEDKYTLRLPEHVKIKV-TRGHSQTESCVTFA-ELIRNRGYDHRRFGEVSGQTQS 287
Query: 304 RN 305
+N
Sbjct: 288 KN 289
>sp|Q9FIR0|ATL30_ARATH RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2
SV=1
Length = 289
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 132/267 (49%), Gaps = 43/267 (16%)
Query: 25 PYSNMKFS-PSLAIIIVVLISALFFMGFFSIYIRHC-SDSSNSVIRPAGAGGNRSRRGAA 82
PY +S P L II+ V++ +FF+GFF+IY C + G + A
Sbjct: 14 PYPPQHYSKPPLVIILTVILLVVFFIGFFAIYFCKCFYHTLTEAWNHHYHNGLPENQIQA 73
Query: 83 R----------GLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETL-RLIPK 131
+ GL+ +I ++P F +S VK L+ K LECA+CL EFE++ L RL+
Sbjct: 74 QQEPVQPPVNPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTT 133
Query: 132 CDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQNDAAVAAET 191
C HVFH ECID WLES+ TCPVCR NL E E+ +E V E
Sbjct: 134 CYHVFHQECIDQWLESNKTCPVCRRNLDPNAPENI--------KELIIE------VIQEN 179
Query: 192 PQETQPQAQCSQPPEPQVISGNFANQTLNRNRTRGSRSGR----PRKFPRSHSTGHSLVQ 247
E + Q Q S +N+ + ++ G+ + P KF RS +TGHS+V+
Sbjct: 180 AHENRDQEQTST-----------SNEVMLSRQSSGNNERKIETLPDKFSRSKTTGHSIVR 228
Query: 248 PG-EDTERFTLRLPVDVRKQIMNRELN 273
E+ +R+TLRLP V+ ++ R N
Sbjct: 229 NKPEEEDRYTLRLPDHVKIKVTRRHNN 255
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 134 bits (338), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 120/214 (56%), Gaps = 12/214 (5%)
Query: 22 SVDPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPAGAGGNRSRRGA 81
SVD F P+ +I +++++ + + ++ + + A SR A
Sbjct: 37 SVDRNRKTNF-PTETVIAIIVLAIFISLSMVACFLH--KTFYRAEVEAASQEVFHSR--A 91
Query: 82 ARGLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECI 141
RGL++E++++FP F+YSEVK LK+GKG +ECA+CL+EF D ETLR +P C H FH CI
Sbjct: 92 RRGLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCI 151
Query: 142 DAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQNDAAVAAETPQETQPQAQC 201
D WL S +TCP CR+NL+ +PGE+ P P + E E +++ ++ + Q
Sbjct: 152 DVWLSSQSTCPACRANLSLKPGESYPYP--ITDLETGNEQRDEHSLLQLGTNLDRFTLQL 209
Query: 202 SQPPEPQVISGNF---ANQTLNRNRT--RGSRSG 230
+ + Q++S N +N TL R + +G RSG
Sbjct: 210 PEEMQRQLVSLNLIRTSNMTLPRAMSSRQGYRSG 243
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
Query: 243 HSLVQPGEDTERFTLRLPVDVRKQIMNRELNRSNSLVVLPREASSRRGYRPGGGGEGSSR 302
HSL+Q G + +RFTL+LP ++++Q+++ L R++++ LPR SSR+GYR G S
Sbjct: 193 HSLLQLGTNLDRFTLQLPEEMQRQLVSLNLIRTSNM-TLPRAMSSRQGYRSGF-----SH 246
Query: 303 GRNT 306
GR T
Sbjct: 247 GRQT 250
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 125/247 (50%), Gaps = 32/247 (12%)
Query: 31 FSPSLAIIIVVLISALFFMGFFSIYIRHCSDS---------SNSVIRPAGAGGNRSRRGA 81
F+P+ +++V LI+A + FS+ I C+ + S + +P G S A
Sbjct: 43 FTPTTVVVLVALITAFVLLTVFSVLINRCAQARAPPRRAFRSTASHQPVGGAAAAS--RA 100
Query: 82 ARGLDREVIDTFPTFVYSEVKTLKVGK-GALECAVCLNEFEDDETLRLIPKCDHVFHPEC 140
+RGLD+EV++ FPT VY +VK K G LECAVCL EF D + LR++P C HVFHP+C
Sbjct: 101 SRGLDKEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDC 160
Query: 141 IDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQNDAAVAAETPQETQPQAQ 200
ID WL + TCP+CR+NL T P S + DL A +A E+ + +
Sbjct: 161 IDPWLAAAVTCPLCRANL------TAPPVSLAAAESSDLTAPEEAVQEEESEELDEASLM 214
Query: 201 CSQPPEPQVISGNFANQTLNRNRTRGSRSGRPRKFPRSHSTGHSLVQPGEDTERFTLRLP 260
+ PE + G + + R+G P + R+ S + +R TLRLP
Sbjct: 215 ATFTPESVIDFGATHDHEFD-------RAGYPH-YRRTQSAMDAA------PDRHTLRLP 260
Query: 261 VDVRKQI 267
V K++
Sbjct: 261 EHVMKEL 267
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 111 bits (277), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 93/161 (57%), Gaps = 23/161 (14%)
Query: 34 SLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPAGAGGNRSRRGA------------ 81
++A+ I +L+ ALFFMGFFS+Y RH +DSS+S + + RS R +
Sbjct: 49 TMALTIFILLVALFFMGFFSVYFRHFADSSSSTVDISSMPRTRSSRMSPRRLSTSVVVSR 108
Query: 82 ----ARGLDREVIDTFPTFVYSEVKTLKVGKGALE-CAVCLNEFEDDETLRLIPKCDHVF 136
RGLD + + + P + Y+ K K E C +CL++FE+ ET+++IP C HVF
Sbjct: 109 PYSFRRGLDSQAVRSLPVYRYT-----KAAKQRNEDCVICLSDFEEGETVKVIPHCGHVF 163
Query: 137 HPECIDAWLESHTTCPVCRSN-LASEPGETTPQPSELGSSE 176
H +C+D WL S+ TCP+CRSN L S+ +P + S+E
Sbjct: 164 HVDCVDTWLSSYVTCPLCRSNQLFSDKDLGMQEPPDQDSAE 204
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 97/183 (53%), Gaps = 23/183 (12%)
Query: 19 PPGSVDPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHC--------SDSSNSVIRPA 70
PP ++ S++ F PSLAII V S +F + F + C +DS IR
Sbjct: 26 PPPNLYATSDL-FKPSLAIITGVF-SIVFTLTFVLLVYAKCFHNDLRSETDSDGERIRHD 83
Query: 71 GAGG---NRSRRGAARGLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLR 127
NRS R + GLD++ I++ P F +S +K LK G LEC+VCL++FED E LR
Sbjct: 84 RLWQGLFNRSSRFS--GLDKKAIESLPFFRFSALKGLKQG---LECSVCLSKFEDVEILR 138
Query: 128 LIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQNDAAV 187
L+PKC H FH CID WLE H TCP+CR+ + E S LG+S L N +
Sbjct: 139 LLPKCRHAFHIGCIDQWLEQHATCPLCRNRVNIE-----DDLSVLGNSSTSLRILNQSET 193
Query: 188 AAE 190
E
Sbjct: 194 REE 196
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 59/77 (76%)
Query: 83 RGLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECID 142
RGLD E I +FP+FVY+E + ++ G G LEC VCLNEF+DDETLRL+P C HVFH +C+D
Sbjct: 55 RGLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVD 114
Query: 143 AWLESHTTCPVCRSNLA 159
WL +TCP+CR+ +
Sbjct: 115 IWLSHSSTCPICRAKVV 131
>sp|Q9LQM2|ATL81_ARATH RING-H2 finger protein ATL81 OS=Arabidopsis thaliana GN=ATL81 PE=2
SV=1
Length = 332
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 87/166 (52%), Gaps = 18/166 (10%)
Query: 84 GLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDA 143
GLD ++I++FP + YS VK G +C++CL EF DD+T+RLI C+H FH CID
Sbjct: 130 GLDSKIIESFPEYPYS-VK----DHGTDQCSICLTEFMDDDTIRLISTCNHSFHTICIDL 184
Query: 144 WLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQNDAAVAAETPQETQPQAQCS- 202
W E H TCPVCR L E + +P E+ E+DL V +E E P+ +
Sbjct: 185 WFEGHKTCPVCRRELDVEDRTSLEKPLEV--PEIDL-------VRSEIHDEPLPRDTVTI 235
Query: 203 --QPPEPQVISGNFANQTLNRNRTRGSRSGRPRKFPRSHSTGHSLV 246
P G+ + + R ++ R F RSHSTGHS+V
Sbjct: 236 IVHEEHPSTTIGSLEHTDEIESYERRMKASNLR-FWRSHSTGHSIV 280
>sp|Q9ZV53|ATL49_ARATH Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana
GN=ATL49 PE=3 SV=1
Length = 423
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 84 GLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDA 143
G+D+ +IDT P F Y + LK+ +C VCL EFE ++ LRL+PKC H FH ECID
Sbjct: 99 GVDQSLIDTLPVFHYKSIVGLKIS--PFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDT 156
Query: 144 WLESHTTCPVCRSNLAS 160
WL SH+TCP+CRSNL S
Sbjct: 157 WLLSHSTCPLCRSNLLS 173
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 19/168 (11%)
Query: 9 PLSLAQRSPEPPGSVDPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRH---------C 59
P++L + + S N + SP + IIV+L F + +R+
Sbjct: 27 PITLNHQLTDSSSSSSSGGNNRISPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLS 86
Query: 60 SDSSNSVIRPAGAGGNRSRRGAAR-------GLDREVIDTFPTFVYSEVKTLKVGKGALE 112
S + S P + + +R + GLD+ +ID P F+Y E+K K +
Sbjct: 87 SSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKG---TKEPFD 143
Query: 113 CAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLAS 160
CAVCL EF +D+ LRL+P C H FH +CID WL S++TCP+CR L S
Sbjct: 144 CAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFS 191
>sp|Q5XF85|ATL42_ARATH E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana GN=ATL42
PE=1 SV=2
Length = 432
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 15 RSPEPPGSVDPYSNMKFSPSLAIIIVVLISALFFMGF-FSIYIRHCSDSSNS-------- 65
++P P + D +N F PSLA++ VL + +F + F +Y + C S
Sbjct: 19 QTPPPFRNGDLVAN--FEPSLAVVTGVL-AIMFALTFVLLVYAKCCHIDLRSGSGDRRRH 75
Query: 66 -VIRPAGAGGNRSRRGAAR--GLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFED 122
G NRS + R GLD+ I++ P F +S LK K L+C+VCL++FE
Sbjct: 76 DRRLRQGIFFNRSTASSDRFSGLDKTAIESLPLFRFS---ALKGSKQGLDCSVCLSKFES 132
Query: 123 DETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASE 161
E LRL+PKC H FH CID WLE H TCP+CR ++ E
Sbjct: 133 VEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSME 171
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 72/136 (52%), Gaps = 16/136 (11%)
Query: 33 PSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVI----------RPAGAGGNRSRRGAA 82
P +A++I VL + +Y++HC + SV R G N
Sbjct: 56 PGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGGGVVGG 115
Query: 83 R---GLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPE 139
R G+DR VI++ P F + + K G LECAVCL FE E LRL+PKC H FH E
Sbjct: 116 RKNSGIDRSVIESLPVFRFGALSGHKDG---LECAVCLARFEPTEVLRLLPKCKHAFHVE 172
Query: 140 CIDAWLESHTTCPVCR 155
C+D WL++H+TCP+CR
Sbjct: 173 CVDTWLDAHSTCPLCR 188
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 82/167 (49%), Gaps = 22/167 (13%)
Query: 39 IVVLISALFFMGFFSIYIR--------------HCSDSSNSVIRPAGAGGNRSRRGAARG 84
IV+L + M F +Y R + + V A + A+RG
Sbjct: 35 IVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPSTAATSVVASRG 94
Query: 85 LDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAW 144
LD VI + P F +S+ + K +ECAVCL+EFE+ ET R++P C H FH +CID W
Sbjct: 95 LDPNVIKSLPVFTFSD----ETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMW 150
Query: 145 LESHTTCPVCRSNLASEPG-ETTPQPSELGSSEVDLEAQNDAAVAAE 190
SH+TCP+CRS + S G E+T E EV + +D + E
Sbjct: 151 FHSHSTCPLCRSLVESLAGIESTAAARE---REVVIAVDSDPVLVIE 194
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 84/170 (49%), Gaps = 14/170 (8%)
Query: 13 AQRSPEPPGSV-DPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCS--DSSNSVIRP 69
A +P+P G + D Y + LA ++ LI AL +R S + V
Sbjct: 14 ANANPKPKGGINDTYFDTNMVIILAALLCALICALSLNSALRCVLRITRRFTSDDQVSNA 73
Query: 70 AGAGGNRSRRGAARGLDREVIDTFPTFVY-SEVKTLKVGKGALECAVCLNEFEDDETLRL 128
+ A N R AA GL ++ + P +Y S + +K A EC +CL +FED E +R+
Sbjct: 74 SNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMK----ATECLICLGDFEDGEKVRV 129
Query: 129 IPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVD 178
+PKC+H FH CID WL S ++CP CR +L E QPS + S D
Sbjct: 130 LPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLE------QPSPMAVSRRD 173
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 94.7 bits (234), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 114/242 (47%), Gaps = 36/242 (14%)
Query: 33 PSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPAGAGGNRSRRGA----------- 81
P LA+ ++ +++ F + + +++ C + + + +R RR
Sbjct: 35 PILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDPLMVYSPEL 94
Query: 82 -ARGLDREVIDTFPTF-----------VYSEVKTLKVGKGALECAVCLNEFEDDETLRLI 129
+RGLD VI P F V++ + K + EC+VCL+EF+D+E LR+I
Sbjct: 95 RSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRII 154
Query: 130 PKCDHVFHPECIDAWLESHTTCPVCRSNLASE---PGETTPQPSELGSSEVDLEAQNDAA 186
P C H+FH +CID WL+++ CP+CR+ ++ + P + PS + V L +N+
Sbjct: 155 PNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPSTSPENLVMLRGENEYV 214
Query: 187 VAA---------ETPQETQPQAQCSQPPEPQVISGNFANQTLNRNRTRGSRSGRPRKFPR 237
V ++P+ + + +++ N N +++ + + R G PRKF +
Sbjct: 215 VIELGSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQN-SISPSPKKLDRGGLPRKFRK 273
Query: 238 SH 239
H
Sbjct: 274 LH 275
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 74/166 (44%), Gaps = 33/166 (19%)
Query: 30 KFSPSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPAGAGGNRSRRG--------- 80
+ SP++ +IV+L F G + +R + P+ +RS R
Sbjct: 40 RISPAVLFVIVILAVLFFISGLLHLLVRFL------IKHPSATASSRSNRFPEISTSDAL 93
Query: 81 ----------AARGLDREVIDTFPTFVYSEV-------KTLKVGKGALECAVCLNEFEDD 123
GLD+ ID P F Y E+ + +CAVCL EF +
Sbjct: 94 QRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEK 153
Query: 124 ETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQP 169
+ LRL+P C H FH CID WL+S++TCP+CR L S PG + P
Sbjct: 154 DKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFS-PGFSMENP 198
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 30/192 (15%)
Query: 33 PSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVI----RPAGAGGN----RSRRGAARG 84
P LAI ++ +++ F + + I++ C + + + R + N S RG
Sbjct: 42 PILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPHEVNRG 101
Query: 85 LDREVIDTFPTFVYSEVKTL----KVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPEC 140
LD I P F + + + K + EC+VCLNEF++DE LR+IP C HVFH +C
Sbjct: 102 LDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDC 161
Query: 141 IDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQNDAAVAAETPQETQPQAQ 200
ID WL+ + CP+CR++++ E T D A +P+E P ++
Sbjct: 162 IDIWLQGNANCPLCRTSVSCEASFTL-----------------DLISAPSSPRENSPHSR 204
Query: 201 CSQPPEPQVISG 212
++ EP ++ G
Sbjct: 205 -NRNLEPGLVLG 215
>sp|Q6NKR1|ATL28_ARATH RING-H2 finger protein ATL28 OS=Arabidopsis thaliana GN=ATL28 PE=2
SV=1
Length = 254
Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 106/238 (44%), Gaps = 41/238 (17%)
Query: 22 SVDPYSNMKFSPSLAI-IIVVLISALFFM---GFFSIYIRH-----CSDSSNSVIRPAGA 72
S+D PS+++ + VVL L F+ GFFS+++ + N P G
Sbjct: 6 SIDSIPATAVFPSVSMPVTVVLTGVLLFVIFAGFFSLFLWQFLLNRLFTTWNLQRTPYGD 65
Query: 73 GGNRSRRGAARGLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKC 132
+ + GLD +I +FP F YS G ECA+CL+EF D++T+RLI C
Sbjct: 66 LIHVATPPENTGLDPFIIRSFPVFHYSSATKKNHGT---ECAICLSEFSDEDTVRLITVC 122
Query: 133 DHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQPSELGSSEVDLEAQNDAAVAAETP 192
H FH CID W E H TCPVCR L +PG E + V + Q+
Sbjct: 123 RHPFHSNCIDLWFELHKTCPVCRCEL--DPGMIGSGRLESFHNTVTITIQD-----INHD 175
Query: 193 QETQPQAQCSQPPEPQVISGNFANQTLNRNRTRGSRSGRPRKFPRSHSTGHSLVQPGE 250
+E P A S+ ++I + +F RSHSTGH +V+ +
Sbjct: 176 EENPPTAGSSK----RLIEAS------------------AWRFSRSHSTGHFMVKTTD 211
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 84 GLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDA 143
G+D+ IDT P F Y + LK +CAVCL EFE ++ LRL+PKC H FH +CID
Sbjct: 107 GVDQSFIDTLPVFHYKSIIGLK--NYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDT 164
Query: 144 WLESHTTCPVCR 155
WL SH+TCP+CR
Sbjct: 165 WLLSHSTCPLCR 176
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 59/100 (59%), Gaps = 8/100 (8%)
Query: 84 GLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDA 143
GLD+ ID P F+Y V T+ + + +CAVCLNEF D + LRL+P C H FH CID
Sbjct: 180 GLDQTAIDALPVFLYGNV-TISLEQ-PFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDT 237
Query: 144 WLESHTTCPVCR-----SNLASEPGETTPQPSELGSSEVD 178
WL S++TCP+CR SN+ ET P G +VD
Sbjct: 238 WLLSNSTCPLCRRSLSTSNVCYNHSETLVAPLS-GHQQVD 276
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 70/126 (55%), Gaps = 17/126 (13%)
Query: 84 GLDREVIDTFPTFVYSEVKTLKVGKGAL---ECAVCLNEFEDDETLRLIPKCDHVFHPEC 140
GL R I++ V K G+G + EC+VCLNEFE+DE+LRL+PKC H FH C
Sbjct: 109 GLHRSAINSIT------VVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNC 162
Query: 141 IDAWLESHTTCPVCRS--NLASEP----GETTPQPSELGSSEVDLEAQNDAAVAAETPQE 194
ID WL SH CP+CR+ L +EP ET QP S+ DL + D++ +
Sbjct: 163 IDTWLLSHKNCPLCRAPVLLITEPPHQETETNHQPDSESSN--DLRGRQDSSRSRRNHNI 220
Query: 195 TQPQAQ 200
P+AQ
Sbjct: 221 FLPRAQ 226
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 75/149 (50%), Gaps = 23/149 (15%)
Query: 32 SPSLAIIIVVLIS----ALFFMGFFSIYIRHCSDSSNSVIRPAGAGGNRSRRGAARG--L 85
S SL I ++ I+ A+ GFF + + SDS N V + N
Sbjct: 77 SSSLDAISIITITGAVLAILLTGFF-LVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQ 135
Query: 86 DREVIDTFPTFVYSE------------VKTLKVGKGALE---CAVCLNEFEDDETLRLIP 130
DRE +D P ++ + K G G +E C VCLNEFE+DE+LRL+P
Sbjct: 136 DREQVD-HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLP 194
Query: 131 KCDHVFHPECIDAWLESHTTCPVCRSNLA 159
KC+H FH CID WL SHT CP+CR+ +A
Sbjct: 195 KCNHAFHISCIDTWLSSHTNCPLCRAGIA 223
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
Query: 84 GLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDA 143
GL+ +I + P F +S V L A+EC+VCL+EF+D+E+ R++P C H FH CID
Sbjct: 51 GLNPSIIKSLPIFTFSAVTAL----FAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDM 106
Query: 144 WLESHTTCPVCRSNLASEPGETTPQPSELGSSEVD-LEAQNDAAVAAETPQETQPQAQCS 202
W SH++CP+CRS + G E+ S D + + ET ++ P+
Sbjct: 107 WFHSHSSCPLCRSQIEPFAGGVKSSMDEVAISISDPVYGDTNHHEGTETTGDSVPEDSQR 166
Query: 203 QPPEPQVISGNFANQTLNRNRTRGSRS 229
+P ++ N + +R+ RS
Sbjct: 167 KPAAIEISQRNLGEIENDLSRSHSFRS 193
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 18/131 (13%)
Query: 38 IIVVLISALFFMGFFSIYIRHC------SDSSNSVIRPAGAGGNRSRRGAAR---GLDRE 88
+I +L SAL + ++++ ++C S S + G G S + + GL+
Sbjct: 61 LIGILTSALILVSYYTLISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRISTNGDGLNES 120
Query: 89 VIDTFPTFVYSEVKTLKVGKGALE---CAVCLNEFEDDETLRLIPKCDHVFHPECIDAWL 145
+I + + Y K G G ++ C+VCL+EFE++E+LRL+PKC+H FH CID WL
Sbjct: 121 MIKSITVYKY------KSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWL 174
Query: 146 ESHTTCPVCRS 156
+SH+ CP+CR+
Sbjct: 175 KSHSNCPLCRA 185
>sp|P0CH03|AT21C_ARATH Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana
GN=ATL21C PE=3 SV=1
Length = 366
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 26 YSNMKFSPSLAIIIVVLISALFFMGFFSIYIR-HCSDSSNSVIRPAGAGGNRSRRGAARG 84
+ N S + ++++ L + F+ I IR + S+ +S I A A RG
Sbjct: 233 FINGNLSSGVLVLVISLSAVTVFVFPTCIAIRLYDSERFDSAIAAATVMQQPREVMARRG 292
Query: 85 LDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAW 144
LD+ I+TF E + L G + C +CL+E+ ET+R IP+CDH FH ECID W
Sbjct: 293 LDQSTIETFKKMELGESRRLS-GTNGIVCPICLSEYASKETVRFIPECDHCFHVECIDVW 351
Query: 145 LESHTTCPVCRSNLA 159
L+ H +CP+CR++ A
Sbjct: 352 LKIHGSCPLCRNSCA 366
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 22/160 (13%)
Query: 27 SNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCS-DSSNSVIRPAGAGG-----NRSRRG 80
SN SP + I + +A ++++ ++C+ D++N +G N RG
Sbjct: 54 SNPNLSPLVIAIFGIFATAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERG 113
Query: 81 ----------AARGLDREVIDTFPTFVYSEVKT-LKVGKGALECAVCLNEFEDDETLRLI 129
+ GLD +I F + + K+ +C++CL EF +DE+LRL+
Sbjct: 114 DQDDPFALESSTAGLDDTLIKKIGFFKLKKHQNGFKIN--GTDCSICLGEFNEDESLRLL 171
Query: 130 PKCDHVFHPECIDAWLESHTTCPVCRSNLASEPGETTPQP 169
PKC+H FH CID WL+SH+ CP+CR+ + TT QP
Sbjct: 172 PKCNHTFHVVCIDRWLKSHSNCPLCRAKIIV---PTTQQP 208
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 33/175 (18%)
Query: 22 SVDPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIR------------- 68
S D S FSP + II VL SA + +++ ++C S+ R
Sbjct: 46 SADDSSGPVFSPLVIAIIGVLASAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGG 105
Query: 69 ----PAGAGGNRSRRGAA------RGLDREVIDTFPTFVYSEVKTLKVGKGAL---ECAV 115
G +SR + GLD +I+ Y + G G + +C+V
Sbjct: 106 GAGSGGRHGHGQSRSHESWNVSPPSGLDETLINKITVCKY------RRGDGFVHTTDCSV 159
Query: 116 CLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNLA-SEPGETTPQP 169
CL EF D E+LRL+P+C H FH +CID WL+SH+ CP+CR+N+ G +P+P
Sbjct: 160 CLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVTVGLASPEP 214
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 87/173 (50%), Gaps = 21/173 (12%)
Query: 36 AIIIVVLISALFFMGF--FSIYIRHCSDSSNSVIRPAGAGG-----NRSRRGAARGLDRE 88
A I V I F + F + IY+R S ++ GG N + A GL ++
Sbjct: 31 AFIFSVPICFTFIVLFVLYVIYLRRNSTTNVDWSSLGMRGGTFVPTNNNLSTAELGLSKD 90
Query: 89 VIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESH 148
+ + P +Y E +K +C+VCL +++ +E L+ +P C H FH ECID WL SH
Sbjct: 91 IREMLPVVIYKESFIVKDS----QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSH 146
Query: 149 TTCPVCRSNLASEPG-ETTPQPSELGSSEVDLEAQNDAAVAAETPQETQPQAQ 200
TTCP+CR +L +P + + Q +E+ SS +E N + TQP +Q
Sbjct: 147 TTCPLCRLSLIPKPSLDLSHQSTEIVSS---IENSNGGEAS------TQPDSQ 190
>sp|Q9SKK8|ATL22_ARATH RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2
SV=2
Length = 377
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 66 VIRPAGAGGNRSRRGAAR-GLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDE 124
V R +G+ ++ AR GLD I+++ E + L G + C +CL+E+ E
Sbjct: 279 VARLSGSVTSQPSNEVARIGLDESTIESYKKVELGESRRLPTGSNDVVCPICLSEYATKE 338
Query: 125 TLRLIPKCDHVFHPECIDAWLESHTTCPVCRSN 157
T+R +P+C+H FH ECIDAWL+ H++CPVCRSN
Sbjct: 339 TVRCLPECEHCFHTECIDAWLKLHSSCPVCRSN 371
>sp|Q67YI6|ATL65_ARATH RING-H2 finger protein ATL65 OS=Arabidopsis thaliana GN=ATL65 PE=2
SV=2
Length = 411
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 84 GLDREVIDTFPTFVYSEVKTL---KVGKGAL----ECAVCLNEFEDDETLRLIPKCDHVF 136
GLD VI T P F+YS VGK + +CAVCL EFE+ + +R +P C H F
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 137 HPECIDAWLESHTTCPVCRSNLASEPGETTPQ 168
H ECID WL SH CP+CR+ + G TP
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAILGSAGVLTPM 211
>sp|Q6NQG7|ATL78_ARATH RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2
SV=1
Length = 219
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 86/166 (51%), Gaps = 10/166 (6%)
Query: 15 RSPEPPGSVDPY-SNMKFSPSLAIIIVVLISALFF-MGFFSIYIRHCSDSSNSVIRPAGA 72
+SP P S PY + F ++ +++ VL+ AL +G SI IR SN V AG
Sbjct: 37 QSPTPAPS--PYVGDNNFDANVVMVLSVLLCALVCSLGLNSI-IRCALRCSNLVPSEAG- 92
Query: 73 GGNRSRRGAARGLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKC 132
G N R G+ R+ + +F T YS L + ECA+CL+EF +E ++L+P C
Sbjct: 93 GDNYPVRLTNTGVKRKALKSFQTVSYS--TELNLPGLDTECAICLSEFVAEERVKLLPTC 150
Query: 133 DHVFHPECIDAWLESHTTCPVCRSNL--ASEPGETTPQPSELGSSE 176
H FH CID WL SH++CP CR L E Q S L S++
Sbjct: 151 HHGFHVRCIDKWLSSHSSCPTCRHCLIQTCEKIADCSQTSSLNSTQ 196
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 91/177 (51%), Gaps = 25/177 (14%)
Query: 29 MKFSPSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPAGAGG----NRSRRGAARG 84
+KF+ + + I V++ L + YI +SN+ + + GG N + A G
Sbjct: 20 LKFTFIVCVPICVILIVLLVL-----YIMR--RNSNTNVDWSSLGGFVPTNNNLSTAELG 72
Query: 85 LDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAW 144
L +++ + P +Y E T+ +C+VCL +++ +E L+ +P C H FH ECID W
Sbjct: 73 LSKDIREMLPIVIYKESFTV----NDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLW 128
Query: 145 LESHTTCPVCRSNLASEPG-ETTPQPSELGSSEVDLEAQNDAAVAAETPQETQPQAQ 200
L SHTTCP+CR +L +P + + Q E+ SS +E N + TQP +Q
Sbjct: 129 LTSHTTCPLCRLSLIPKPSVDLSHQSIEIVSS---IENTNGGEAS------TQPDSQ 176
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 79/146 (54%), Gaps = 17/146 (11%)
Query: 35 LAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPAGAGGNRSRRGAARG---------- 84
LA +I++ ++ + + F S Y R N IR + RS AAR
Sbjct: 30 LASVIILFVAVILILCFHS-YARWLFRRQNRRIRRRISAHLRSL-AAARDPTQSSSSLSP 87
Query: 85 LDREVIDTFPTFVYSEVKTLKVGKGALE-CAVCLNEFEDDETLRLIPKCDHVFHPECIDA 143
LD V++ P FVYS +K + LE C+VCL+EFE+D+ R++PKC HVFH +CID
Sbjct: 88 LDPTVLEKIPIFVYS----VKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDT 143
Query: 144 WLESHTTCPVCRSNLASEPGETTPQP 169
W S ++CP+CR+ + T P+P
Sbjct: 144 WFRSRSSCPLCRAPVQPAQPVTEPEP 169
>sp|Q9FLC6|ATL73_ARATH RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2
SV=1
Length = 176
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 23/168 (13%)
Query: 1 MLLVAHALP-LSLAQRSPEPPGSVDPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHC 59
LL A P +S +P G D SN K S+ +V++++AL ++ I
Sbjct: 4 FLLATQATPTISATDANPRTLG--DSVSNNKNIASMDTHMVIILAALLCALICALGI--- 58
Query: 60 SDSSNSVIRPAGAGGNR---------SRRGAARGLDREVIDTFPTFVYSEVKTLKVGKGA 110
NSV+R R + A+G+ + + P YS +K A
Sbjct: 59 ----NSVLRCVLRCTRRFTPNEDPVDTNANVAKGIKKRALKVIPVDSYSPELKMK----A 110
Query: 111 LECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCPVCRSNL 158
EC +CL +F + ET+R++PKC+H FH +CID WL SH++CP CR +L
Sbjct: 111 TECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSL 158
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 27/152 (17%)
Query: 33 PSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPAGAGGNRSRRG------------ 80
P L +I +L SA + ++++ ++C ++ + A NR
Sbjct: 58 PLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNN 117
Query: 81 ------------AARGLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRL 128
GLD +I + + Y ++ +C+VCL+EF+++E+LRL
Sbjct: 118 GATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESS---DCSVCLSEFQENESLRL 174
Query: 129 IPKCDHVFHPECIDAWLESHTTCPVCRSNLAS 160
+PKC+H FH CID WL+SH+ CP+CR+ + +
Sbjct: 175 LPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVT 206
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Query: 83 RGLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECID 142
RGLD VI + PTFV +K ECAVCL+ E+ + R++P C HVFH C+D
Sbjct: 74 RGLDSLVIASLPTFVVG----IKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVD 129
Query: 143 AWLESHTTCPVCRSNLASEPGETTPQPSE 171
WL + +TCPVCR+ P+P E
Sbjct: 130 TWLTTQSTCPVCRTEAEPSHPRLEPEPRE 158
>sp|Q9LY41|ATL4_ARATH E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4
PE=1 SV=1
Length = 334
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%)
Query: 89 VIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESH 148
V+D+ P F +S V + +CAVCL++FE ++ LRL+P C H FH +CID WL S+
Sbjct: 93 VLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSN 152
Query: 149 TTCPVCRSNLASEPGETTPQPSELGSS 175
TCP+CRS L + + + +GS+
Sbjct: 153 QTCPLCRSPLFASESDLMKSLAVVGSN 179
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 35 LAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPAGAGGNRSRRGAAR--GLDREVIDT 92
L+ +IV+ ++ + + F S Y R N IR R+ + R LD+ V+D
Sbjct: 30 LSSVIVLFVAVIMILCFHS-YARWLFRRHNRRIRRRIRSHLRTLSASPRDQALDQAVLDK 88
Query: 93 FPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTCP 152
P FVYS K + EC+VCL+EFE+++ RL+PKC H FH +CID W S +TCP
Sbjct: 89 IPIFVYSS-KNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCP 147
Query: 153 VCRS 156
+CR+
Sbjct: 148 LCRA 151
>sp|P0CH02|AT21B_ARATH Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana
GN=ATL21B PE=3 SV=1
Length = 362
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 34 SLAIIIVVLISALFFMGFFSIYIRHCSDSSNSVIRPAGAGGNRSRR--GAARGLDREVID 91
++ I + ++ + + F+ +I I + + + A A + R A RGLD+ I+
Sbjct: 236 AVLICLSIIGAVILFVTCIAIRIHNTPRRRHWAVPAAAATVMQQPREVMATRGLDQSTIE 295
Query: 92 TFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRLIPKCDHVFHPECIDAWLESHTTC 151
+ T E + G + C +CL+E+ ET+R IP+CDH FH +CID WL+ H +C
Sbjct: 296 KYKTMELGESRR-PPGTNGIVCPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGSC 354
Query: 152 PVCRSNLA 159
P+CR++ A
Sbjct: 355 PLCRNSRA 362
>sp|Q570X5|ATL58_ARATH RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2
SV=1
Length = 261
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 26/255 (10%)
Query: 10 LSLAQRSPEPPGSVDPYSNMKFSPSLAIIIVVLISALFFMGFFSIYIRHCSDSSNSV-IR 68
+S + +PE + +K + + + + + F+ IY+R S +S+ +R
Sbjct: 1 MSYSNSNPENYSAATSSPELKLYQAFIFSVPICFTFIILFLFYLIYLRRSSSDLSSLGMR 60
Query: 69 PAGAGGNRSRRGAARGLDREVIDTFPTFVYSEVKTLKVGKGALECAVCLNEFEDDETLRL 128
GN S GL +E+ + P V+ E T+ + C+VCL +++ ++ L+
Sbjct: 61 TTFIPGN-SLSTIELGLSKELREMLPIVVFKESFTVMDSQ----CSVCLGDYQPNDKLQQ 115
Query: 129 IPKCDHVFHPECIDAWLESHTTCPVCRSNL--------ASEPGETTPQPSELGSSEVDLE 180
IP C H FH +CID WL SHTTCP+CR L +P + P E SS+ + E
Sbjct: 116 IPVCKHTFHMDCIDLWLTSHTTCPLCRLALIPSRSRQSQDDPVPSLVSPDEEVSSQPESE 175
Query: 181 AQNDAAVAAETPQETQPQAQCSQPPEPQVISGNFANQTLNRNRTRGSRSGRPRKFPRSHS 240
N V+ + E + S PE Q + + RG S +P P +H
Sbjct: 176 PVNHRVVSTQPESEPVNHSGVSSQPESQPVVNH-----------RG-VSSQPESQPVNHI 223
Query: 241 TGHSLVQPGEDTERF 255
Q +D E F
Sbjct: 224 NDGHEQQCDQDVEGF 238
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,859,278
Number of Sequences: 539616
Number of extensions: 5472887
Number of successful extensions: 19495
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 256
Number of HSP's that attempted gapping in prelim test: 18871
Number of HSP's gapped (non-prelim): 670
length of query: 320
length of database: 191,569,459
effective HSP length: 117
effective length of query: 203
effective length of database: 128,434,387
effective search space: 26072180561
effective search space used: 26072180561
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)