Your job contains 1 sequence.
>048012
AQFPFTFGKQAKSQTPLEKIHNATRRSDPLTTTTAATDNEKNNLPSISSSSKEWLGTLRN
PKSSDAAPIGPPPPPPRQQELKADDGDVMIGPPRPPQQQEDDADSVMIGPPRPPAESGDD
DDDDVDEEEGEENRHQIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQG
MNSRLQSFRQLEPSEGHQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYI
RDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV
AVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL
LSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGL
LCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDKSQGGTHILYDPRLSERGA
LVCVARAPRKKSVDDFEVAPVIHNPHALPLFRDQPSRKRQREKLLKDPIKSHKPEVPVTG
PGHGGRVGASKGSLLTQYLLKQGGMIKETWMEEDPREAILKYADVAAKDPKYIAPAYAQT
QPAPVFQESDSEDEEK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048012
(616 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2038952 - symbol:AT2G20330 "AT2G20330" species... 2345 2.4e-243 1
MGI|MGI:1921020 - symbol:Wdr70 "WD repeat domain 70" spec... 1079 3.4e-109 1
FB|FBgn0034908 - symbol:CG5543 species:7227 "Drosophila m... 964 5.2e-97 1
WB|WBGene00001513 - symbol:gad-1 species:6239 "Caenorhabd... 750 2.5e-74 1
UNIPROTKB|O16519 - symbol:gad-1 "Gastrulation defective p... 750 2.5e-74 1
ASPGD|ASPL0000045251 - symbol:AN2214 species:162425 "Emer... 660 5.3e-69 2
UNIPROTKB|G4N7L0 - symbol:MGG_06387 "WD repeat-containing... 652 3.7e-66 2
POMBASE|SPAC343.17c - symbol:SPAC343.17c "WD repeat prote... 519 3.0e-64 3
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 178 2.5e-14 2
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 192 2.6e-14 2
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 188 4.8e-14 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 188 4.9e-14 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 188 4.9e-14 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 188 4.9e-14 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 185 1.1e-13 2
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 187 1.4e-13 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 130 2.4e-13 2
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 180 4.4e-13 2
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 181 5.4e-13 2
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 161 8.3e-13 2
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 132 9.9e-13 2
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 130 1.0e-12 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 130 1.0e-12 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 131 1.3e-12 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 164 1.4e-12 2
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 130 1.5e-12 2
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 127 1.8e-12 2
ZFIN|ZDB-GENE-030131-5987 - symbol:taf5l "TAF5-like RNA p... 185 7.5e-12 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 154 1.1e-11 2
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 139 1.5e-11 2
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 187 5.4e-11 2
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 162 5.6e-11 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 170 7.6e-11 2
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 182 8.1e-11 3
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 160 1.0e-10 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 158 1.2e-10 2
FB|FBgn0021874 - symbol:Nle "Notchless" species:7227 "Dro... 115 1.2e-10 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 170 1.2e-10 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 170 1.2e-10 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 170 1.2e-10 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 170 1.2e-10 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 170 1.2e-10 2
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 166 1.2e-10 2
UNIPROTKB|G4MRA1 - symbol:MGG_04693 "WD repeat-containing... 133 1.9e-10 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 170 2.6e-10 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 177 2.7e-10 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 184 2.7e-10 1
MGI|MGI:2442144 - symbol:Taf5 "TAF5 RNA polymerase II, TA... 177 2.8e-10 2
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 176 3.5e-10 2
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 176 3.5e-10 2
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 176 3.5e-10 2
WB|WBGene00015974 - symbol:C18E3.5 species:6239 "Caenorha... 152 3.8e-10 2
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 175 4.3e-10 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 152 4.3e-10 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 152 4.3e-10 2
ZFIN|ZDB-GENE-030131-263 - symbol:prp19 "PRP19/PSO4 homol... 176 4.7e-10 1
UNIPROTKB|E1C8E9 - symbol:TAF5L "Uncharacterized protein"... 165 5.9e-10 2
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 175 6.8e-10 1
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 173 7.4e-10 2
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 170 9.0e-10 1
UNIPROTKB|E1BHK9 - symbol:E1BHK9 "Uncharacterized protein... 164 1.1e-09 2
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 167 1.2e-09 2
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 173 1.3e-09 1
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 166 1.3e-09 2
UNIPROTKB|O75529 - symbol:TAF5L "TAF5-like RNA polymerase... 166 1.4e-09 2
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 173 1.5e-09 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 173 1.5e-09 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 173 1.6e-09 1
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 169 1.9e-09 1
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 169 1.9e-09 1
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 169 1.9e-09 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 169 2.1e-09 1
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 168 2.5e-09 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 151 2.6e-09 1
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 126 2.7e-09 2
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 167 2.7e-09 1
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 167 3.0e-09 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 167 3.1e-09 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 167 3.1e-09 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 167 3.2e-09 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 167 3.2e-09 1
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 167 3.2e-09 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 167 3.2e-09 1
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 167 3.2e-09 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 167 3.2e-09 1
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 167 3.2e-09 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 167 3.2e-09 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 167 3.2e-09 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 167 3.2e-09 1
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 167 3.2e-09 1
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 167 3.2e-09 1
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 167 3.2e-09 1
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 167 3.2e-09 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 167 3.2e-09 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 167 3.9e-09 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 167 3.9e-09 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 166 4.0e-09 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 166 4.0e-09 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 166 4.2e-09 1
UNIPROTKB|Q5ZMA2 - symbol:PRPF19 "Pre-mRNA-processing fac... 167 4.5e-09 1
WARNING: Descriptions of 585 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2038952 [details] [associations]
symbol:AT2G20330 "AT2G20330" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006626 "protein targeting to
mitochondrion" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC006569 GO:GO:0080008 HOGENOM:HOG000172867 OMA:YWIAPAY
EMBL:AF367346 EMBL:AF428322 EMBL:AY133596 IPI:IPI00521094
PIR:H84587 RefSeq:NP_179623.1 UniGene:At.13963
ProteinModelPortal:Q9SK69 SMR:Q9SK69 PaxDb:Q9SK69 PRIDE:Q9SK69
EnsemblPlants:AT2G20330.1 GeneID:816552 KEGG:ath:AT2G20330
TAIR:At2g20330 InParanoid:Q9SK69 PhylomeDB:Q9SK69
ProtClustDB:CLSN2683314 ArrayExpress:Q9SK69 Genevestigator:Q9SK69
Uniprot:Q9SK69
Length = 648
Score = 2345 (830.5 bits), Expect = 2.4e-243, P = 2.4e-243
Identities = 445/595 (74%), Positives = 499/595 (83%)
Query: 33 TTAATDNEKNNLPSISSSSKEWL----GTLRNPKSSDAAPIGXXX--XXXRQQELKADDG 86
TT D++K+ PS+SSSS+ WL G RNP SS +G R QE + +D
Sbjct: 49 TTKKPDSDKSGFPSLSSSSQTWLRSVRGPNRNPNSSGDVAMGPPPPPSSKRTQEEEEEDE 108
Query: 87 DVMIGPPRPPQQ----QEDDADSVMIGPPRPP--AXXXXXXXXXXXXXXXXXNRHQIPMS 140
+VM+GPP PP+ + D + MIGPP PP A NR+QIP+S
Sbjct: 109 EVMMGPPPPPKGLGNINDSDDEGDMIGPPPPPPAARDSDEDSDDDDDNDNEENRYQIPLS 168
Query: 141 NEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVR 200
NEI LKGHTKIVS+LAVD +G+RVLSGSYDYTVRMYDFQGMNSRLQSFRQ+EPSEGHQVR
Sbjct: 169 NEIQLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYDFQGMNSRLQSFRQIEPSEGHQVR 228
Query: 201 NLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHP 260
++SWSPTS +FLCVTGSAQAKI+DRDGLTLGEF+KGDMYIRDLKNTKGHICGLTCGEWHP
Sbjct: 229 SVSWSPTSGQFLCVTGSAQAKIFDRDGLTLGEFMKGDMYIRDLKNTKGHICGLTCGEWHP 288
Query: 261 KTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGD 320
+TKET+LTSSEDGSLRIWDVN F SQ QVIKPKLARPGRV VTTCAWD DGK IAGG+GD
Sbjct: 289 RTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIAGGVGD 348
Query: 321 GSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEP 380
GSIQ+W+LKPGWGSRPDI+V K H+DDIT++KFSSDGRILLSRSFDGSLKVWDLR+MKE
Sbjct: 349 GSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEA 408
Query: 381 LKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGISPA 440
LKVFE LPN Y QTNVAFSPDEQ+ LTGTSVE++STTGGLLCFYDR KLE+V +VGISP
Sbjct: 409 LKVFEGLPNYYPQTNVAFSPDEQIILTGTSVEKDSTTGGLLCFYDRTKLEIVQKVGISPT 468
Query: 441 CSVVQCAWHPKLNQIFATAGDKSQGGTHILYDPRLSERGALVCVARAPRKKSVDDFEVAP 500
SVVQCAWHP+LNQIFAT+GDKSQGGTHILYDP SERGA VCVARAPRKKSVDD++ P
Sbjct: 469 SSVVQCAWHPRLNQIFATSGDKSQGGTHILYDPSQSERGACVCVARAPRKKSVDDYQPEP 528
Query: 501 VIHNPHALPLFRDQPSRKRQREKLLKDPIKSHKPEVPVTGPGHGGRVGASKGSLLTQYLL 560
VIHNPHALPLFRD PSRKR+REK LKDP+KSHKPE+P+TGPGHGGRVG + LLTQYLL
Sbjct: 529 VIHNPHALPLFRDAPSRKREREKALKDPMKSHKPEIPMTGPGHGGRVGTTGSGLLTQYLL 588
Query: 561 KQGGMIKETWMEEDPREAILKYADVAAKDPKYIAPAYAQTQPAPVFQESDSEDEE 615
KQGGMIKETWMEEDPREAILKYA+VA KDPK+IAPAY+QTQP +F +SD E+EE
Sbjct: 589 KQGGMIKETWMEEDPREAILKYAEVAVKDPKFIAPAYSQTQPKTIFAKSDDEEEE 643
Score = 181 (68.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 51/130 (39%), Positives = 67/130 (51%)
Query: 1 AQFPFTFGKQAKSQTPLEKIHNATRRSDPLTT-------TTAATDNEKNNLPSISSSSKE 53
A FP +FGK +K E IH+ATRR+D TT D++K+ PS+SSSS+
Sbjct: 10 AHFPVSFGKTSKVSASTEAIHSATRRTDVANDAGVSSDITTKKPDSDKSGFPSLSSSSQT 69
Query: 54 WL----GTLRNPKSSDAAPIGXXX--XXXRQQELKADDGDVMIGPPRPPQQQEDDADSVM 107
WL G RNP SS +G R QE + +D +VM+GPP PP+ + DS
Sbjct: 70 WLRSVRGPNRNPNSSGDVAMGPPPPPSSKRTQEEEEEDEEVMMGPPPPPKGLGNINDSDD 129
Query: 108 IGP---PRPP 114
G P PP
Sbjct: 130 EGDMIGPPPP 139
>MGI|MGI:1921020 [details] [associations]
symbol:Wdr70 "WD repeat domain 70" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000172867
EMBL:AK159714 IPI:IPI00464325 UniGene:Mm.321312
ProteinModelPortal:Q3TWF6 SMR:Q3TWF6 PhosphoSite:Q3TWF6
REPRODUCTION-2DPAGE:IPI00464325 PaxDb:Q3TWF6 PRIDE:Q3TWF6
UCSC:uc007veg.1 HOVERGEN:HBG108671 InParanoid:Q3TWF6
OrthoDB:EOG4NS3B3 ChiTaRS:WDR70 CleanEx:MM_WDR70
Genevestigator:Q3TWF6 Uniprot:Q3TWF6
Length = 657
Score = 1079 (384.9 bits), Expect = 3.4e-109, P = 3.4e-109
Identities = 242/630 (38%), Positives = 354/630 (56%)
Query: 5 FT-FGKQAKSQTPLEKIHNATRRSDPLTTTTAATDNEKNNLPSISSSSKEWLGTLRNPKS 63
FT FGK+A++ LE + TRR+ + EK + ++ + + S
Sbjct: 27 FTGFGKKART-FDLEAMFEQTRRTAVERSRKTLEAREKEEEMNREKELRKQIEDMEPAPS 85
Query: 64 SDAAPIGXXXXXXRQ---QELKADDG-----DVMIGPPRPPQQQEDDADSV---MIGPPR 112
S +A R + ++DD D +IGPP PP+ + +V +GP
Sbjct: 86 SSSAARERSQSSCRDTSSSDSESDDSSDSSDDELIGPPLPPKMVGESVTTVDEGTLGPLP 145
Query: 113 PPAXXXXXXXXXXXXXXXXXNRH---QIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSY 169
PP + +IP S+EI L+ TK VSAL +D SG+R+++G Y
Sbjct: 146 PPLCEEGEDDDDDELDDEGEEDNPVQRIPDSHEITLRHGTKTVSALGLDPSGARLVTGGY 205
Query: 170 DYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLT 229
DY V+ +DF GM++ ++FR L+P E HQ+++L +S T D L V+GS+QAK+ DRDG
Sbjct: 206 DYDVKFWDFAGMDASFKAFRSLQPCECHQIKSLQYSNTGDMILVVSGSSQAKVIDRDGFE 265
Query: 230 LGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQV 289
+ E +KGD YI D+ NTKGH L WHPK K +T S D ++R+W+V K QK V
Sbjct: 266 VMECIKGDQYIVDMANTKGHTAMLHTDSWHPKIKGEFMTCSNDATVRLWEVENPKKQKSV 325
Query: 290 IKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSD--D 347
KP+ + +V TTC + DG +A +GSIQ+W+ P H ++ H D
Sbjct: 326 FKPRTMQGKKVIPTTCTYSRDGNLVAAACQNGSIQIWDRN--LTVHPKFHYKQAHDPGTD 383
Query: 348 ITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLT 407
+ + FS DG +L SR D +LK+WD+R+ +PL DLP + T+ FSPD++L +T
Sbjct: 384 TSCVAFSYDGNVLASRGGDDTLKLWDVRQFNKPLFSASDLPTLFPMTDCCFSPDDKLIVT 443
Query: 408 GTSVERESTTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDKSQGGT 467
GTSV+R +G L+ F +R + V + I+ A SVV+C WHPKLNQI G+ G
Sbjct: 444 GTSVQRGCGSGKLV-FLERRTFQRVYEIHITDA-SVVRCLWHPKLNQIMVGTGN---GLA 498
Query: 468 HILYDPRLSERGALVCVARAPRKKSVDDFEVAPVIHNPHALPLFRD--QPSRKRQREKLL 525
+ YDP S+RGA +CV + RK + I PHALP+FR+ Q S ++Q EK
Sbjct: 499 KVYYDPNKSQRGAKLCVVKTQRKAKQAETLTQDYIITPHALPMFREPRQRSTRKQLEKDR 558
Query: 526 KDPIKSHKPEVPVTGPGHGGRVGASKGSLLTQYLLKQGGMIKETWMEEDPREAILKYADV 585
DP+KSHKPE PV GPG GGRVG + G L+ Y++K + K + +PREAIL++A
Sbjct: 559 LDPLKSHKPEPPVAGPGRGGRVG-THGGTLSSYIVKNIALDKTD--DSNPREAILRHAKA 615
Query: 586 AAKDPKYIAPAYAQTQPAPVFQESDSEDEE 615
A +P +++PAY++TQP +F + +S+DEE
Sbjct: 616 AEDNPYWVSPAYSKTQPKTMFAQVESDDEE 645
>FB|FBgn0034908 [details] [associations]
symbol:CG5543 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GeneTree:ENSGT00390000015433 OMA:YWIAPAY EMBL:AY058624
EMBL:AY113366 RefSeq:NP_611832.1 UniGene:Dm.4144
ProteinModelPortal:Q9W1J3 SMR:Q9W1J3 PaxDb:Q9W1J3 PRIDE:Q9W1J3
EnsemblMetazoa:FBtr0072124 GeneID:37768 KEGG:dme:Dmel_CG5543
UCSC:CG5543-RA FlyBase:FBgn0034908 InParanoid:Q9W1J3
OrthoDB:EOG4F4QS5 PhylomeDB:Q9W1J3 GenomeRNAi:37768 NextBio:805315
Bgee:Q9W1J3 Uniprot:Q9W1J3
Length = 655
Score = 964 (344.4 bits), Expect = 5.2e-97, P = 5.2e-97
Identities = 210/486 (43%), Positives = 301/486 (61%)
Query: 136 QIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSE 195
+IP ++E+ ++ ++ V ALA D SG+R++SGS DY + +DF GM+S ++SFRQL+P E
Sbjct: 169 RIPYTHEVQMQHGSRAVLALAGDPSGARLVSGSIDYDMCFWDFAGMDSSMRSFRQLQPCE 228
Query: 196 GHQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTC 255
H +R+L +S T D L ++G+AQAK+ DRDG E KGD YI D+ TKGH+ LT
Sbjct: 229 NHPIRSLQYSVTGDMILVISGNAQAKVLDRDGFEKLECCKGDQYISDMSRTKGHVAQLTS 288
Query: 256 GEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPG-RVAVTTCAWDCDGKCI 314
G WHP +E LT++ DG+LRIW + K Q QVIK + A+ G R +C ++ D I
Sbjct: 289 GCWHPFNREQFLTAALDGTLRIWQGLKSKEQLQVIKTR-AQGGLRTNAASCNFNRDATLI 347
Query: 315 AGGIGDGSIQVWNLKPGWGSRP----DIHVEKGHSDDITALKFSSDGRILLSRSFDGSLK 370
A G DGSIQ W+ + + + D H +KG +IT++ FS G+ L +RS D ++K
Sbjct: 348 AAGCVDGSIQTWDTRKMFVNTTHCVRDAH-QKG--SEITSIVFSYMGQQLATRSNDETMK 404
Query: 371 VWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDREKLE 430
+WDLR+ K+PL + +L + Y T+ FSPD++L +TG S+ + L FY + E
Sbjct: 405 LWDLRQFKQPLHTWTNLFSRYDTTDCCFSPDDRLLVTGESLPKGQAEANLY-FYSTKSYE 463
Query: 431 LVSRVGISPACSVVQCAWHPKLNQIFATAGDKSQGGTHILYDPRLSERGALVCVARAPRK 490
V R+ +S A VV+ WHPKLNQ+F + G+ G YD S RGA +CV + RK
Sbjct: 464 EVQRIPVSNA-HVVKTLWHPKLNQLFVSCGN---GTIKCYYDEHRSIRGAKLCVVKTHRK 519
Query: 491 KSVDDFEVAPVIHNPHALPLFRDQPSR--KRQREKLLKDPIKSHKPEVPVTGPGHGGRVG 548
+ + I PHALPLFR + SR +++ EK DP+KS +P++P+T G GGRV
Sbjct: 520 RQPMEMVGVSQIITPHALPLFRQEKSRTSRKRMEKARMDPVKSQRPDLPITS-GQGGRV- 577
Query: 549 ASKGSLLTQYLLKQGGMIKETWMEEDPREAILKYADVAAKDPKYIAPAYAQTQPAPVFQE 608
AS G L+ Y+++ G+ K ++DPREAILKYA AA++P +IAPAY QTQP +F E
Sbjct: 578 ASSGGTLSSYVIRNLGLSKRVDDDQDPREAILKYAKDAAENPYWIAPAYKQTQPKAIFSE 637
Query: 609 SDSEDE 614
DE
Sbjct: 638 KLPADE 643
>WB|WBGene00001513 [details] [associations]
symbol:gad-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0042074 "cell migration involved in gastrulation"
evidence=IMP] [GO:0000132 "establishment of mitotic spindle
orientation" evidence=IMP] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0000132 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0042074 EMBL:FO081501 PIR:T31906 RefSeq:NP_504635.1
ProteinModelPortal:O16519 SMR:O16519 DIP:DIP-27096N IntAct:O16519
MINT:MINT-251309 STRING:O16519 PaxDb:O16519
EnsemblMetazoa:T05H4.14.1 EnsemblMetazoa:T05H4.14.2 GeneID:179027
KEGG:cel:CELE_T05H4.14 UCSC:T05H4.14 CTD:179027 WormBase:T05H4.14
GeneTree:ENSGT00390000015433 HOGENOM:HOG000172867 InParanoid:O16519
OMA:YWIAPAY NextBio:903582 Uniprot:O16519
Length = 620
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 180/505 (35%), Positives = 275/505 (54%)
Query: 137 IPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEG 196
IP + E + T+ +SAL V+ G R SG DY V+++DFQ M+ ++ ++L P+E
Sbjct: 111 IPAACEAKISHGTQAISALRVEPPGVRFASGGLDYYVKLFDFQKMDMSMRYDKELLPAES 170
Query: 197 HQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCG 256
H + +L++SP + + +G A ++ DR G E V+GD YI DL TKGH + C
Sbjct: 171 HVINSLAFSPNGETLVVASGEAIIRLLDRAGKQWSETVRGDQYIIDLNITKGHTATVNCV 230
Query: 257 EWHPKTKETILTSSEDGSLRIWDVNEFK-------SQKQVIKPKLARPGRVAVTTCAWDC 309
E++P K ++ S+DGSLR+W++++ K ++VIK K A RV+ C +
Sbjct: 231 EFNPLNKNEFISCSDDGSLRLWNLDDHKVITKCINKHRKVIKTKGANGKRVSPQVCTFSP 290
Query: 310 DGKCIAGGIGDGSIQVWNLKPGWGSR-PDIH--VEKGHSDDITALKFSSDGRILLSRSFD 366
DGK IA G DGS+Q W +GS+ +++ V K H+ IT++ FS D + LLSR FD
Sbjct: 291 DGKWIAAGCDDGSVQAWK----YGSQYVNVNYLVRKAHNGSITSIAFSPDSKRLLSRGFD 346
Query: 367 GSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDR 426
+LK+W L KEPL V L N + T+ FSP ++ TGTS + T G L F+D
Sbjct: 347 DTLKMWSLDNPKEPLLVKTGLENAFKSTDCGFSPRAEVVFTGTSSPNKDTPGTLQ-FFDP 405
Query: 427 EKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDKSQGGTHILYDPRLSERGALVCVAR 486
+LV ++ P S + WHP+LNQI A D G H+ YD +S+RG + CV +
Sbjct: 406 MTFDLVYKIDY-PGISCHRIQWHPRLNQIIAGLSD---GTIHVYYDQTMSQRGVMSCVTK 461
Query: 487 APRKKSVDDFEVAPVIHNPHALPLFRDQPSRKRQRE-------KLLKDPIKSHKPE---- 535
++ + ++ +P +L +F+ + ++E K L+ +PE
Sbjct: 462 PLKRNRASEVVREDMVLSPLSLEMFQPRGEEGEEKEVTGWRIKKYLRMQDNKLRPEFRKP 521
Query: 536 --VPVTGPGHGGRVGASKGSLLTQYLLKQGGMIK--ETWMEEDPREAILKYADVAAKDPK 591
+P+ G GRV AS GSL + YL KQ G + E + D R +ILK+A A ++P
Sbjct: 522 ADMPINGKSANGRVAASGGSLHS-YLAKQIGTARNAEFLKDTDVRASILKHAKDAEENPL 580
Query: 592 YIAPAYAQTQPAPVFQESDSEDEEK 616
YI AY +TQP +FQE+ E E++
Sbjct: 581 YIDKAYRKTQPKKIFQETAVEPEDQ 605
>UNIPROTKB|O16519 [details] [associations]
symbol:gad-1 "Gastrulation defective protein 1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0000132 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
GO:GO:0042074 EMBL:FO081501 PIR:T31906 RefSeq:NP_504635.1
ProteinModelPortal:O16519 SMR:O16519 DIP:DIP-27096N IntAct:O16519
MINT:MINT-251309 STRING:O16519 PaxDb:O16519
EnsemblMetazoa:T05H4.14.1 EnsemblMetazoa:T05H4.14.2 GeneID:179027
KEGG:cel:CELE_T05H4.14 UCSC:T05H4.14 CTD:179027 WormBase:T05H4.14
GeneTree:ENSGT00390000015433 HOGENOM:HOG000172867 InParanoid:O16519
OMA:YWIAPAY NextBio:903582 Uniprot:O16519
Length = 620
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 180/505 (35%), Positives = 275/505 (54%)
Query: 137 IPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEG 196
IP + E + T+ +SAL V+ G R SG DY V+++DFQ M+ ++ ++L P+E
Sbjct: 111 IPAACEAKISHGTQAISALRVEPPGVRFASGGLDYYVKLFDFQKMDMSMRYDKELLPAES 170
Query: 197 HQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCG 256
H + +L++SP + + +G A ++ DR G E V+GD YI DL TKGH + C
Sbjct: 171 HVINSLAFSPNGETLVVASGEAIIRLLDRAGKQWSETVRGDQYIIDLNITKGHTATVNCV 230
Query: 257 EWHPKTKETILTSSEDGSLRIWDVNEFK-------SQKQVIKPKLARPGRVAVTTCAWDC 309
E++P K ++ S+DGSLR+W++++ K ++VIK K A RV+ C +
Sbjct: 231 EFNPLNKNEFISCSDDGSLRLWNLDDHKVITKCINKHRKVIKTKGANGKRVSPQVCTFSP 290
Query: 310 DGKCIAGGIGDGSIQVWNLKPGWGSR-PDIH--VEKGHSDDITALKFSSDGRILLSRSFD 366
DGK IA G DGS+Q W +GS+ +++ V K H+ IT++ FS D + LLSR FD
Sbjct: 291 DGKWIAAGCDDGSVQAWK----YGSQYVNVNYLVRKAHNGSITSIAFSPDSKRLLSRGFD 346
Query: 367 GSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDR 426
+LK+W L KEPL V L N + T+ FSP ++ TGTS + T G L F+D
Sbjct: 347 DTLKMWSLDNPKEPLLVKTGLENAFKSTDCGFSPRAEVVFTGTSSPNKDTPGTLQ-FFDP 405
Query: 427 EKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDKSQGGTHILYDPRLSERGALVCVAR 486
+LV ++ P S + WHP+LNQI A D G H+ YD +S+RG + CV +
Sbjct: 406 MTFDLVYKIDY-PGISCHRIQWHPRLNQIIAGLSD---GTIHVYYDQTMSQRGVMSCVTK 461
Query: 487 APRKKSVDDFEVAPVIHNPHALPLFRDQPSRKRQRE-------KLLKDPIKSHKPE---- 535
++ + ++ +P +L +F+ + ++E K L+ +PE
Sbjct: 462 PLKRNRASEVVREDMVLSPLSLEMFQPRGEEGEEKEVTGWRIKKYLRMQDNKLRPEFRKP 521
Query: 536 --VPVTGPGHGGRVGASKGSLLTQYLLKQGGMIK--ETWMEEDPREAILKYADVAAKDPK 591
+P+ G GRV AS GSL + YL KQ G + E + D R +ILK+A A ++P
Sbjct: 522 ADMPINGKSANGRVAASGGSLHS-YLAKQIGTARNAEFLKDTDVRASILKHAKDAEENPL 580
Query: 592 YIAPAYAQTQPAPVFQESDSEDEEK 616
YI AY +TQP +FQE+ E E++
Sbjct: 581 YIDKAYRKTQPKKIFQETAVEPEDQ 605
>ASPGD|ASPL0000045251 [details] [associations]
symbol:AN2214 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 HOGENOM:HOG000172867 OMA:YWIAPAY
EMBL:AACD01000035 OrthoDB:EOG4BVW2Z RefSeq:XP_659818.1
EnsemblFungi:CADANIAT00008898 GeneID:2875754 KEGG:ani:AN2214.2
eggNOG:NOG245684 Uniprot:Q5BB66
Length = 596
Score = 660 (237.4 bits), Expect = 5.3e-69, Sum P(2) = 5.3e-69
Identities = 172/548 (31%), Positives = 283/548 (51%)
Query: 100 EDDADSVMIGPPRPPAXXXXXXXXXXXXXXXXXNRHQIPMSNEIVLKGHTKIVSALAVDH 159
+ D++ IGP P + + P+S+E+V+K H + V+ + VD
Sbjct: 58 KSDSEGDDIGPAGPSDKVKEDSDDSDDDSDDDDDEDEFPVSHELVMKTHERAVTTITVDL 117
Query: 160 SGSRVLSGSYDYTVRMYDFQGMN-SRLQSFRQLEPS--------EGHQVRNLSWSPTSDR 210
SGSR+++GS D T++++DF M S +++F+ ++PS + H V +++P S
Sbjct: 118 SGSRLITGSTDCTIKLHDFASMTPSTIRAFKSVDPSAKKTSAAQDAHAVHYAAFNPISPA 177
Query: 211 F-LCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTS 269
+ L V+ + Q +I DRDG T+ EFVKGDMY+RD+ NTKGHI +T G W P + T+
Sbjct: 178 YVLVVSATPQPRILDRDGETVTEFVKGDMYLRDMHNTKGHISEVTSGVWSPTDENLCATA 237
Query: 270 SEDGSLRIWDVNEFKSQKQVI--KPKLA-RPGRVAVTTCAWDCDGK-----CIAGGIGDG 321
D ++RIWD N +SQK+VI K ++A GR +T AW + +A + DG
Sbjct: 238 GTDSTVRIWDANIGRSQKEVIVHKSRVAGSAGRSKMTALAWGSPKQGGADVLVAAAL-DG 296
Query: 322 SIQVWNLKPGWGSRPDIHVEKGHSDDI--TALKFSSDGRILLSRSFDGSLKVWDLRKMKE 379
S+ +W+ G +RP + H+ D + + S+DGR+++++ D ++K+WD RK K+
Sbjct: 297 SLMMWSGN-GPYTRPSAEIRDAHARDTWTSGIDVSADGRLVITKGGDDTIKLWDTRKFKQ 355
Query: 380 PLKVFE--DLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDRE-KLELVSRVG 436
P+ + + Y +N+ FSP +TG S TG L K ELV+ V
Sbjct: 356 PITTVSHPSISSRYPTSNIVFSPTSANVVTG------SETGHLHILNPATLKPELVTPV- 408
Query: 437 ISPACSVVQCAWHPKLNQIFATAGDKSQGGTHILYDPRLSERGALVCVARAPRKKSVDDF 496
+P ++ WH KLNQI + + TH+LY+P +S +GA + +++AP+++ +DD
Sbjct: 409 -TPGSPLITVQWHEKLNQILTGSANAE---THVLYNPNMSTKGAALVMSKAPKRRHIDD- 463
Query: 497 EVAPVIHNPHALPLFRDQPSRKRQREKLLKDPIKSHK-PEVPVTGPGHGGRVGASKGSLL 555
P + + + D S + P + +T G
Sbjct: 464 --DPTLTMNLSQGISGDSVVVGSNGVPHYSSATWSARHPTIGLTASGRSRDPRRPHLPAQ 521
Query: 556 TQYLLKQGGM--IKE-----TWMEEDPREAILKYADVAAKDPKYIAPAYAQTQPAPVFQE 608
T + Q I+E + +EDPREA+LKYA+ A KDP + A+ +TQP P++++
Sbjct: 522 TPFAKSQPDERHIRENIPLSSMRDEDPREALLKYAEKAEKDPIF-TKAWKETQPKPIYRD 580
Query: 609 -SDSEDEE 615
SD E+ E
Sbjct: 581 ISDDEEPE 588
Score = 58 (25.5 bits), Expect = 5.3e-69, Sum P(2) = 5.3e-69
Identities = 24/85 (28%), Positives = 34/85 (40%)
Query: 3 FPFTFGKQAKSQTPLEKIHNATRRSDPLTTTTAATDNEKNNLPSISSSSKEWLGTLRNPK 62
FP +FGKQ K +I N TRR+ T NEK L S ++ ++ + +
Sbjct: 13 FPTSFGKQEKRPDVNAQI-NQTRRA-----VKPDTSNEKTKL---SDATGDY-DAKSDSE 62
Query: 63 SSDAAPIGXXXXXXRQQELKADDGD 87
D P G + DD D
Sbjct: 63 GDDIGPAGPSDKVKEDSDDSDDDSD 87
Score = 41 (19.5 bits), Expect = 3.3e-67, Sum P(2) = 3.3e-67
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 80 ELKAD-DGDVMIGPPRPPQQQEDDAD 104
+ K+D +GD IGP P + ++D+D
Sbjct: 56 DAKSDSEGDD-IGPAGPSDKVKEDSD 80
>UNIPROTKB|G4N7L0 [details] [associations]
symbol:MGG_06387 "WD repeat-containing protein 70"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001234 RefSeq:XP_003717186.1
ProteinModelPortal:G4N7L0 EnsemblFungi:MGG_06387T0 GeneID:2684542
KEGG:mgr:MGG_06387 Uniprot:G4N7L0
Length = 584
Score = 652 (234.6 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 172/509 (33%), Positives = 274/509 (53%)
Query: 136 QIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMN-SRLQSFRQLEP- 193
+ P+S+E+VLK H K V+A+++D +GSR+ +GS D T++++DF M + L++F+ ++P
Sbjct: 91 EYPVSHELVLKTHEKAVTAVSLDPAGSRLGTGSLDCTIKLHDFASMTPTTLRAFKSVDPW 150
Query: 194 --------SEGHQVRNLSWSPTSD-RFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLK 244
+E H + + +SP S +FLC+T QAK+ RDG L EFVKGDMY+RD+
Sbjct: 151 ETKKSAASAESHPINQILFSPLSGGQFLCITAHPQAKVMSRDGDILAEFVKGDMYLRDMH 210
Query: 245 NTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVI--KPKLA-RPGRVA 301
NTKGHI ++ G W P + +T+ D +LRIWD+N +SQK +I K K A GR
Sbjct: 211 NTKGHIGEVSAGAWSPTDRNLCVTAGSDSTLRIWDINNKRSQKDIIVFKSKAAGAAGRSK 270
Query: 302 VTTCAWDC-----DGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDI--TALKFS 354
+T AW + +A + DG++ +++ G +RP V+ H + + S
Sbjct: 271 MTAVAWSSPLQGGNNALVAAAL-DGTLVMYS-GDGPFTRPAAEVQAAHKPGTWTSGIDIS 328
Query: 355 SDGRILLSRSFDGSLKVWDLRKMKEPLKVFE--DLPNNYAQTNVAFSPDEQLFLTGTSV- 411
+DGR++++R D +K+WD RK+K P+ +++ TN+ +SP+ LTG++
Sbjct: 329 ADGRMIVTRGGDDLIKLWDTRKLKVPVVTASHTSTSDSFRMTNIKYSPNSTSILTGSANG 388
Query: 412 ERESTTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDKSQGGTHILY 471
+ G L + +LV+ V +P ++ WH KLNQI T ++ H+LY
Sbjct: 389 DLHILNPGTL------RPDLVTPV--TPGSPLIVVDWHDKLNQI-VTGSANAE--IHVLY 437
Query: 472 DPRLSERGALVCVARAPRKKSVDDFEVAPVIHNPHALPLFRDQ---PSRKRQREKLLKDP 528
+P +S RGA+ + RAP+K+ +DD P + ++ + D P R +
Sbjct: 438 NPNMSARGAVDVMKRAPKKRHIDD---NPALTMDQSVGISGDSIITPGAMGGRRGGVTAS 494
Query: 529 IKSHKPEVP-VTGPGHGGRVGASKGSLLTQYLLKQGGMIKETWMEEDPREAILKYADVAA 587
+S P P V GR + + L + + EDPREA+LKYADVAA
Sbjct: 495 GRSLDPRRPQVQKVTPFGRSQPDEKHVEENIPLSR-------MLHEDPREALLKYADVAA 547
Query: 588 KDPKYIAPAYAQTQPAPVF-QESDSEDEE 615
KDP + A+ TQP + +ESD E +E
Sbjct: 548 KDPMF-TNAWKDTQPVTQYAEESDEEVDE 575
Score = 39 (18.8 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 14/54 (25%), Positives = 20/54 (37%)
Query: 1 AQFPFTFGKQAKSQTPLEKIHNATRRSDPLTTTTAATDN-EKNNLPSISSSSKE 53
A P +FGK+ K +I + R D D K + P SS +
Sbjct: 22 AFLPESFGKKGKEANIAAQIDRSRRTVDQKQAKKVQDDAVSKQSKPHSDGSSAD 75
>POMBASE|SPAC343.17c [details] [associations]
symbol:SPAC343.17c "WD repeat protein, human WDR70
family" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC343.17c GO:GO:0043234 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 OMA:YWIAPAY PIR:T38666 RefSeq:NP_593438.1
ProteinModelPortal:Q9UT73 EnsemblFungi:SPAC343.17c.1 GeneID:2543123
KEGG:spo:SPAC343.17c OrthoDB:EOG4BVW2Z NextBio:20804150
Uniprot:Q9UT73
Length = 576
Score = 519 (187.8 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 133/384 (34%), Positives = 200/384 (52%)
Query: 137 IPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNS-RLQSFRQLEPSE 195
+P S+EI+ GH+KIV+ D +GSR +GS D T+ +D G+++ F+ ++P++
Sbjct: 77 VPGSHEIMFPGHSKIVTTTTFDKNGSRFYTGSLDNTIHCWDLNGLSATNPHPFKIIDPTD 136
Query: 196 ------G-HQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKG 248
G + V LS S T ++ L + +Q +YDRDG + F KGD YIR++ NTKG
Sbjct: 137 TNADNVGRYPVSKLSCS-TKNQILALYTHSQPILYDRDGSLIVRFSKGDQYIRNMYNTKG 195
Query: 249 HICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIK--PKLARPG--RVAVTT 304
HI +T G W P + + LT+ D + RIWDVN KSQ +V P+ + G R+ VT+
Sbjct: 196 HIAEITDGCWQPDSSQIFLTTGYDSTARIWDVNRTKSQLEVFVHVPEGSHTGLSRIPVTS 255
Query: 305 CAWD-CDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGH--SDDITALKFSSDGRILL 361
CAW+ A + DGSIQ W K RP + ++ H I+ L FS DG LL
Sbjct: 256 CAWNPAKPDNFATAVLDGSIQFWQ-KGSRTKRPVMKIKDAHLPQQGISCLSFSQDGNYLL 314
Query: 362 SRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTG-TSVERESTTGGL 420
SR D +L+VWDLR + + D+ A N FSP ++L L G T+V +
Sbjct: 315 SRGEDNALRVWDLRNSNKCVNERIDILTPKAGGNAIFSPTQKLILAGSTAVNSMKAPLFV 374
Query: 421 LCFYDRE-KLELVSRVGISPACSVVQCAWHPKLNQIFATAGDKSQGGTHILYDPRLSERG 479
L + K L + SV +W+ K+NQ+ + D G ++L+ P S RG
Sbjct: 375 LDAMTLDTKATLFFDSKSTVTASVSAVSWNEKINQVSLGSAD---GNAYVLFSPNESIRG 431
Query: 480 ALVCVARAPRKKSVDDFEVAPVIH 503
R P+ K +DD +++ +H
Sbjct: 432 VKDAAMRPPKSKHIDD-DLSSTVH 454
Score = 232 (86.7 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 77/259 (29%), Positives = 117/259 (45%)
Query: 299 RVAVTTCAWD-CDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGH--SDDITALKFSS 355
R+ VT+CAW+ A + DGSIQ W K RP + ++ H I+ L FS
Sbjct: 250 RIPVTSCAWNPAKPDNFATAVLDGSIQFWQ-KGSRTKRPVMKIKDAHLPQQGISCLSFSQ 308
Query: 356 DGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTG-TSVERE 414
DG LLSR D +L+VWDLR + + D+ A N FSP ++L L G T+V
Sbjct: 309 DGNYLLSRGEDNALRVWDLRNSNKCVNERIDILTPKAGGNAIFSPTQKLILAGSTAVNSM 368
Query: 415 STTGGLLCFYDRE-KLELVSRVGISPACSVVQCAWHPKLNQIFATAGDKSQGGTHILYDP 473
+L + K L + SV +W+ K+NQ+ + D G ++L+ P
Sbjct: 369 KAPLFVLDAMTLDTKATLFFDSKSTVTASVSAVSWNEKINQVSLGSAD---GNAYVLFSP 425
Query: 474 RLSERGALVCVARAPRKKSVDDFEVAPVIH-NPHA-------LPLFRDQPSR-------- 517
S RG R P+ K +DD +++ +H N + L +
Sbjct: 426 NESIRGVKDAAMRPPKSKHIDD-DLSSTVHINSLSGSAGTSDFGLVEETTESASAYFLEA 484
Query: 518 KRQREKLLKDPIKSHKPEV 536
+R+R + KDP S +P+V
Sbjct: 485 RRRRNAVRKDPKLSRQPQV 503
Score = 123 (48.4 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 569 TWMEEDPREAILKYADVAAKDPKYIAPAYAQTQPAPVFQ---ESDSEDEE 615
T + EDPREA+LKYADVA +P + Y++TQP P++Q E D EE
Sbjct: 519 TMLNEDPREALLKYADVAKSNPMF-TKMYSETQPTPIYQGVTEGDISSEE 567
Score = 43 (20.2 bits), Expect = 3.0e-64, Sum P(3) = 3.0e-64
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 4 PFTFGKQAKSQTPLEKIHNATRRSDPLTTTTAATDNE-KNNLPSI---SSSSKEW 54
P FGKQA++ I R + + ++E K N S SS S++W
Sbjct: 9 PLQFGKQAQTYDINALIARFIRPKESFLINSVEKESESKLNSKSTTLQSSDSEDW 63
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 178 (67.7 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 56/204 (27%), Positives = 99/204 (48%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW-DCDGKCIAGGIGDGSIQ 324
I++ S+DG+ ++WD+ Q+ I+ P + +T ++ D K GG+ D ++
Sbjct: 154 IISGSDDGTAKLWDMR----QRGAIQ---TFPDKYQITAVSFSDAADKIFTGGV-DNDVK 205
Query: 325 VWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRK---MKEPL 381
VW+L+ G + + +E GH D IT + S DG LL+ D L VWD+R +
Sbjct: 206 VWDLRKGEAT---MTLE-GHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCV 261
Query: 382 KVFEDLPNNYAQT--NVAFSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGISP 439
K+FE +N+ + ++SPD GT V S+ ++ +D + ++
Sbjct: 262 KIFEGHQHNFEKNLLKCSWSPD------GTKVTAGSSDR-MVHIWDTTSRRTIYKLP-GH 313
Query: 440 ACSVVQCAWHPKLNQIFATAGDKS 463
SV +C +HP I + + DK+
Sbjct: 314 TGSVNECVFHPTEPIIGSCSSDKN 337
Score = 76 (31.8 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 35/142 (24%), Positives = 65/142 (45%)
Query: 143 IVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VR 200
++L GH V + + +G+ + SGS+D + ++ G ++F L+ GH+ +
Sbjct: 47 MLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHG---DCKNFMVLK---GHKNAIL 100
Query: 201 NLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHP 260
+L W TSD V+ S + D T G+ +K N+ C G P
Sbjct: 101 DLHW--TSDGSQIVSASPDKTVRAWDVET-GKQIKKMAEHSSFVNS---CCPTRRGP--P 152
Query: 261 KTKETILTSSEDGSLRIWDVNE 282
I++ S+DG+ ++WD+ +
Sbjct: 153 ----LIISGSDDGTAKLWDMRQ 170
Score = 72 (30.4 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 27/87 (31%), Positives = 43/87 (49%)
Query: 141 NEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVR 200
N +VLKGH + L GS+++S S D TVR +D +++ +Q++ H
Sbjct: 88 NFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWD-------VETGKQIKKMAEHSSF 140
Query: 201 NLSWSPTS-DRFLCVTGS--AQAKIYD 224
S PT L ++GS AK++D
Sbjct: 141 VNSCCPTRRGPPLIISGSDDGTAKLWD 167
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 192 (72.6 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 63/228 (27%), Positives = 117/228 (51%)
Query: 243 LKNTKGHICGL-TCGEWHPKTK--ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGR 299
+K KGH + +C +P + + + T S+DG++++WD+ + K+ Q +
Sbjct: 171 VKRLKGHTSFVNSC---YPARRGPQLVCTGSDDGTVKLWDIRK-KAAVQTFQNTYQV--- 223
Query: 300 VAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRI 359
+AVT D + I+GGI D I+VW+L+ + +GH+D +T L SS+G
Sbjct: 224 LAVTFN--DTSDQIISGGI-DNDIKVWDLR----QNKLTYTMRGHADSVTGLSLSSEGSY 276
Query: 360 LLSRSFDGSLKVWDLRKM--KEP-LKVFEDLPNNYAQT--NVAFSPDEQLFLTGTSVERE 414
LLS + D ++++WD+R KE +K+F+ +N+ + ++SPD + G S +R
Sbjct: 277 LLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK-IAGGSADR- 334
Query: 415 STTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDK 462
+ +D ++ ++ A SV + A+HP+ I + + DK
Sbjct: 335 -----FVYVWDTTSRRILYKLP-GHAGSVNELAFHPEEPIILSASSDK 376
Score = 130 (50.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 40/150 (26%), Positives = 69/150 (46%)
Query: 234 VKGDMYIRDLKNTK------GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQK 287
+ D+ + DL+ K GH +T G +L+++ D ++RIWDV F ++
Sbjct: 240 IDNDIKVWDLRQNKLTYTMRGHADSVT-GLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKE 298
Query: 288 QVIKPKLARPGRVA--VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHS 345
+ +K + C+W DG IAGG D + VW+ SR ++ GH+
Sbjct: 299 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTT----SRRILYKLPGHA 354
Query: 346 DDITALKFSSDGRILLSRSFDGSLKVWDLR 375
+ L F + I+LS S D L + +++
Sbjct: 355 GSVNELAFHPEEPIILSASSDKRLYMGEIQ 384
Score = 110 (43.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 34/157 (21%), Positives = 72/157 (45%)
Query: 262 TKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDG 321
T + I++ D +++WD+ + K + R +VT + +G + D
Sbjct: 231 TSDQIISGGIDNDIKVWDLRQNKLTYTM------RGHADSVTGLSLSSEGSYLLSNAMDN 284
Query: 322 SIQVWNLKPGWGSRPDIHVEKG--HSDDITALK--FSSDGRILLSRSFDGSLKVWDLRKM 377
++++W+++P + + +G H+ + L+ +S DG + S D + VWD
Sbjct: 285 TVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSR 344
Query: 378 KEPLKVFEDLPNNYAQTN-VAFSPDEQLFLTGTSVER 413
+ + LP + N +AF P+E + L+ +S +R
Sbjct: 345 R----ILYKLPGHAGSVNELAFHPEEPIILSASSDKR 377
Score = 76 (31.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 23/81 (28%), Positives = 44/81 (54%)
Query: 145 LKGHTKIVSALAVDHSGSR-VLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLS 203
LKGHT V++ G + V +GS D TV+++D + + +Q+F+ +QV ++
Sbjct: 174 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR-KKAAVQTFQNT-----YQVLAVT 227
Query: 204 WSPTSDRFLCVTGSAQAKIYD 224
++ TSD+ + K++D
Sbjct: 228 FNDTSDQIISGGIDNDIKVWD 248
Score = 63 (27.2 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 141 NEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD 177
N LKGH+ V L + GS + S S D TV ++D
Sbjct: 128 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 164
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 188 (71.2 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 63/228 (27%), Positives = 115/228 (50%)
Query: 243 LKNTKGHICGL-TCGEWHPKTK--ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGR 299
+K KGH + +C +P + + + T S+DG++++WD+ + K+ Q +
Sbjct: 144 VKRLKGHTSFVNSC---YPARRGPQLVCTGSDDGTVKLWDIRK-KAAIQTFQNTYQV--- 196
Query: 300 VAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRI 359
+AVT D + I+GGI D I+VW+L+ + +GH+D +T L SS+G
Sbjct: 197 LAVTFN--DTSDQIISGGI-DNDIKVWDLR----QNKLTYTMRGHADSVTGLSLSSEGSY 249
Query: 360 LLSRSFDGSLKVWDLRKM--KEP-LKVFEDLPNNYAQT--NVAFSPDEQLFLTGTSVERE 414
LLS + D +++VWD+R KE +K+F+ +N+ + ++SPD G S +R
Sbjct: 250 LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAG-SADR- 307
Query: 415 STTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDK 462
+ +D ++ ++ A S+ + A+HP I + + DK
Sbjct: 308 -----FVYVWDTTSRRILYKLP-GHAGSINEVAFHPDEPIIISASSDK 349
Score = 123 (48.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 38/150 (25%), Positives = 68/150 (45%)
Query: 234 VKGDMYIRDLKNTK------GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQK 287
+ D+ + DL+ K GH +T G +L+++ D ++R+WDV F ++
Sbjct: 213 IDNDIKVWDLRQNKLTYTMRGHADSVT-GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKE 271
Query: 288 QVIKPKLARPGRVA--VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHS 345
+ +K + C+W DG IA G D + VW+ SR ++ GH+
Sbjct: 272 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTT----SRRILYKLPGHA 327
Query: 346 DDITALKFSSDGRILLSRSFDGSLKVWDLR 375
I + F D I++S S D L + +++
Sbjct: 328 GSINEVAFHPDEPIIISASSDKRLYMGEIQ 357
Score = 116 (45.9 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 36/157 (22%), Positives = 73/157 (46%)
Query: 262 TKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDG 321
T + I++ D +++WD+ + K + R +VT + +G + D
Sbjct: 204 TSDQIISGGIDNDIKVWDLRQNKLTYTM------RGHADSVTGLSLSSEGSYLLSNAMDN 257
Query: 322 SIQVWNLKPGWGSRPDIHVEKG--HSDDITALK--FSSDGRILLSRSFDGSLKVWDLRKM 377
+++VW+++P + + +G H+ + L+ +S DG + + S D + VWD
Sbjct: 258 TVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 317
Query: 378 KEPLKVFEDLPNNYAQTN-VAFSPDEQLFLTGTSVER 413
+ + LP + N VAF PDE + ++ +S +R
Sbjct: 318 R----ILYKLPGHAGSINEVAFHPDEPIIISASSDKR 350
Score = 67 (28.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 27/140 (19%), Positives = 56/140 (40%)
Query: 143 IVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNL 202
++L GH V +GS + S +D + +++ G ++ L+ G V L
Sbjct: 60 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG---DCDNYATLKGHSG-AVMEL 115
Query: 203 SWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKT 262
++ + ++D + GE VK KGH + +
Sbjct: 116 HYNTDGSMLFSASTDKTVAVWDSE---TGERVK---------RLKGHTSFVNSCYPARRG 163
Query: 263 KETILTSSEDGSLRIWDVNE 282
+ + T S+DG++++WD+ +
Sbjct: 164 PQLVCTGSDDGTVKLWDIRK 183
Score = 63 (27.2 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 141 NEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD 177
N LKGH+ V L + GS + S S D TV ++D
Sbjct: 101 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 137
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 188 (71.2 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 63/228 (27%), Positives = 115/228 (50%)
Query: 243 LKNTKGHICGL-TCGEWHPKTK--ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGR 299
+K KGH + +C +P + + + T S+DG++++WD+ + K+ Q +
Sbjct: 145 VKRLKGHTSFVNSC---YPARRGPQLVCTGSDDGTVKLWDIRK-KAAVQTFQNTYQV--- 197
Query: 300 VAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRI 359
+AVT D + I+GGI D I+VW+L+ + +GH+D +T L SS+G
Sbjct: 198 LAVTFN--DTSDQIISGGI-DNDIKVWDLR----QNKLTYTMRGHADSVTGLSLSSEGSY 250
Query: 360 LLSRSFDGSLKVWDLRKM--KEP-LKVFEDLPNNYAQT--NVAFSPDEQLFLTGTSVERE 414
LLS + D +++VWD+R KE +K+F+ +N+ + ++SPD G S +R
Sbjct: 251 LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAG-SADR- 308
Query: 415 STTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDK 462
+ +D ++ ++ A S+ + A+HP I + + DK
Sbjct: 309 -----FVYVWDTTSRRVLYKLP-GHAGSINEVAFHPDEPIILSASSDK 350
Score = 125 (49.1 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 39/150 (26%), Positives = 68/150 (45%)
Query: 234 VKGDMYIRDLKNTK------GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQK 287
+ D+ + DL+ K GH +T G +L+++ D ++R+WDV F ++
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVT-GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKE 272
Query: 288 QVIKPKLARPGRVA--VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHS 345
+ +K + C+W DG IA G D + VW+ SR ++ GH+
Sbjct: 273 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTT----SRRVLYKLPGHA 328
Query: 346 DDITALKFSSDGRILLSRSFDGSLKVWDLR 375
I + F D I+LS S D L + +++
Sbjct: 329 GSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 119 (46.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 262 TKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDG 321
T + I++ D +++WD+ + K + R +VT + +G + D
Sbjct: 205 TSDQIISGGIDNDIKVWDLRQNKLTYTM------RGHADSVTGLSLSSEGSYLLSNAMDN 258
Query: 322 SIQVWNLKPGWGSRPDIHVEKG--HSDDITALK--FSSDGRILLSRSFDGSLKVWDLRKM 377
+++VW+++P + + +G H+ + L+ +S DG + + S D + VWD
Sbjct: 259 TVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 318
Query: 378 KEPLKVFEDLPNNYAQTN-VAFSPDEQLFLTGTSVER 413
+ V LP + N VAF PDE + L+ +S +R
Sbjct: 319 R----VLYKLPGHAGSINEVAFHPDEPIILSASSDKR 351
Score = 67 (28.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 27/140 (19%), Positives = 56/140 (40%)
Query: 143 IVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNL 202
++L GH V +GS + S +D + +++ G ++ L+ G V L
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG---DCDNYATLKGHSG-AVMEL 116
Query: 203 SWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKT 262
++ + ++D + GE VK KGH + +
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSE---TGERVK---------RLKGHTSFVNSCYPARRG 164
Query: 263 KETILTSSEDGSLRIWDVNE 282
+ + T S+DG++++WD+ +
Sbjct: 165 PQLVCTGSDDGTVKLWDIRK 184
Score = 63 (27.2 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 141 NEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD 177
N LKGH+ V L + GS + S S D TV ++D
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 138
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 188 (71.2 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 63/228 (27%), Positives = 115/228 (50%)
Query: 243 LKNTKGHICGL-TCGEWHPKTK--ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGR 299
+K KGH + +C +P + + + T S+DG++++WD+ + K+ Q +
Sbjct: 145 VKRLKGHTSFVNSC---YPARRGPQLVCTGSDDGTVKLWDIRK-KAAIQTFQNTYQV--- 197
Query: 300 VAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRI 359
+AVT D + I+GGI D I+VW+L+ + +GH+D +T L SS+G
Sbjct: 198 LAVTFN--DTSDQIISGGI-DNDIKVWDLR----QNKLTYTMRGHADSVTGLSLSSEGSY 250
Query: 360 LLSRSFDGSLKVWDLRKM--KEP-LKVFEDLPNNYAQT--NVAFSPDEQLFLTGTSVERE 414
LLS + D +++VWD+R KE +K+F+ +N+ + ++SPD G S +R
Sbjct: 251 LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAG-SADR- 308
Query: 415 STTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDK 462
+ +D ++ ++ A S+ + A+HP I + + DK
Sbjct: 309 -----FVYVWDTTSRRILYKLP-GHAGSINEVAFHPDEPIILSASSDK 350
Score = 125 (49.1 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 39/150 (26%), Positives = 68/150 (45%)
Query: 234 VKGDMYIRDLKNTK------GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQK 287
+ D+ + DL+ K GH +T G +L+++ D ++R+WDV F ++
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVT-GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKE 272
Query: 288 QVIKPKLARPGRVA--VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHS 345
+ +K + C+W DG IA G D + VW+ SR ++ GH+
Sbjct: 273 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTT----SRRILYKLPGHA 328
Query: 346 DDITALKFSSDGRILLSRSFDGSLKVWDLR 375
I + F D I+LS S D L + +++
Sbjct: 329 GSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 118 (46.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 37/157 (23%), Positives = 73/157 (46%)
Query: 262 TKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDG 321
T + I++ D +++WD+ + K + R +VT + +G + D
Sbjct: 205 TSDQIISGGIDNDIKVWDLRQNKLTYTM------RGHADSVTGLSLSSEGSYLLSNAMDN 258
Query: 322 SIQVWNLKPGWGSRPDIHVEKG--HSDDITALK--FSSDGRILLSRSFDGSLKVWDLRKM 377
+++VW+++P + + +G H+ + L+ +S DG + + S D + VWD
Sbjct: 259 TVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 318
Query: 378 KEPLKVFEDLPNNYAQTN-VAFSPDEQLFLTGTSVER 413
+ + LP + N VAF PDE + L+ +S +R
Sbjct: 319 R----ILYKLPGHAGSINEVAFHPDEPIILSASSDKR 351
Score = 67 (28.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 27/140 (19%), Positives = 56/140 (40%)
Query: 143 IVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNL 202
++L GH V +GS + S +D + +++ G ++ L+ G V L
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG---DCDNYATLKGHSG-AVMEL 116
Query: 203 SWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKT 262
++ + ++D + GE VK KGH + +
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSE---TGERVK---------RLKGHTSFVNSCYPARRG 164
Query: 263 KETILTSSEDGSLRIWDVNE 282
+ + T S+DG++++WD+ +
Sbjct: 165 PQLVCTGSDDGTVKLWDIRK 184
Score = 63 (27.2 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 141 NEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD 177
N LKGH+ V L + GS + S S D TV ++D
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 138
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 188 (71.2 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 63/228 (27%), Positives = 115/228 (50%)
Query: 243 LKNTKGHICGL-TCGEWHPKTK--ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGR 299
+K KGH + +C +P + + + T S+DG++++WD+ + K+ Q +
Sbjct: 145 VKRLKGHTSFVNSC---YPARRGPQLVCTGSDDGTVKLWDIRK-KAAIQTFQNTYQV--- 197
Query: 300 VAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRI 359
+AVT D + I+GGI D I+VW+L+ + +GH+D +T L SS+G
Sbjct: 198 LAVTFN--DTSDQIISGGI-DNDIKVWDLR----QNKLTYTMRGHADSVTGLSLSSEGSY 250
Query: 360 LLSRSFDGSLKVWDLRKM--KEP-LKVFEDLPNNYAQT--NVAFSPDEQLFLTGTSVERE 414
LLS + D +++VWD+R KE +K+F+ +N+ + ++SPD G S +R
Sbjct: 251 LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAG-SADR- 308
Query: 415 STTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDK 462
+ +D ++ ++ A S+ + A+HP I + + DK
Sbjct: 309 -----FVYVWDTTSRRILYKLP-GHAGSINEVAFHPDEPIILSASSDK 350
Score = 125 (49.1 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 39/150 (26%), Positives = 68/150 (45%)
Query: 234 VKGDMYIRDLKNTK------GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQK 287
+ D+ + DL+ K GH +T G +L+++ D ++R+WDV F ++
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVT-GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKE 272
Query: 288 QVIKPKLARPGRVA--VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHS 345
+ +K + C+W DG IA G D + VW+ SR ++ GH+
Sbjct: 273 RCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTT----SRRILYKLPGHA 328
Query: 346 DDITALKFSSDGRILLSRSFDGSLKVWDLR 375
I + F D I+LS S D L + +++
Sbjct: 329 GSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 118 (46.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 37/157 (23%), Positives = 73/157 (46%)
Query: 262 TKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDG 321
T + I++ D +++WD+ + K + R +VT + +G + D
Sbjct: 205 TSDQIISGGIDNDIKVWDLRQNKLTYTM------RGHADSVTGLSLSSEGSYLLSNAMDN 258
Query: 322 SIQVWNLKPGWGSRPDIHVEKG--HSDDITALK--FSSDGRILLSRSFDGSLKVWDLRKM 377
+++VW+++P + + +G H+ + L+ +S DG + + S D + VWD
Sbjct: 259 TVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 318
Query: 378 KEPLKVFEDLPNNYAQTN-VAFSPDEQLFLTGTSVER 413
+ + LP + N VAF PDE + L+ +S +R
Sbjct: 319 R----ILYKLPGHAGSINEVAFHPDEPIILSASSDKR 351
Score = 67 (28.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 27/140 (19%), Positives = 56/140 (40%)
Query: 143 IVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNL 202
++L GH V +GS + S +D + +++ G ++ L+ G V L
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG---DCDNYATLKGHSG-AVMEL 116
Query: 203 SWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKT 262
++ + ++D + GE VK KGH + +
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSE---TGERVK---------RLKGHTSFVNSCYPARRG 164
Query: 263 KETILTSSEDGSLRIWDVNE 282
+ + T S+DG++++WD+ +
Sbjct: 165 PQLVCTGSDDGTVKLWDIRK 184
Score = 63 (27.2 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 141 NEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD 177
N LKGH+ V L + GS + S S D TV ++D
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 138
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 185 (70.2 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 62/228 (27%), Positives = 115/228 (50%)
Query: 243 LKNTKGHICGL-TCGEWHPKTK--ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGR 299
+K KGH + +C +P + + + T S+DG++++WD+ + K+ Q +
Sbjct: 145 VKRLKGHTSFVNSC---YPARRGPQLVCTGSDDGTVKLWDIRK-KAAIQTFQNTYQV--- 197
Query: 300 VAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRI 359
+AVT D + I+GGI D I+VW+L+ + +GH+D +T L SS+G
Sbjct: 198 LAVTFN--DTSDQIISGGI-DNDIKVWDLR----QNKLTYTMRGHADSVTGLSLSSEGSY 250
Query: 360 LLSRSFDGSLKVWDLRKM--KEP-LKVFEDLPNNYAQT--NVAFSPDEQLFLTGTSVERE 414
LLS + D +++VWD+R KE +++F+ +N+ + ++SPD G S +R
Sbjct: 251 LLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAG-SADR- 308
Query: 415 STTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDK 462
+ +D ++ ++ A S+ + A+HP I + + DK
Sbjct: 309 -----FVYVWDTTSRRILYKLP-GHAGSINEVAFHPDEPIILSASSDK 350
Score = 122 (48.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 38/150 (25%), Positives = 68/150 (45%)
Query: 234 VKGDMYIRDLKNTK------GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQK 287
+ D+ + DL+ K GH +T G +L+++ D ++R+WDV F ++
Sbjct: 214 IDNDIKVWDLRQNKLTYTMRGHADSVT-GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKE 272
Query: 288 QVIKPKLARPGRVA--VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHS 345
+ ++ + C+W DG IA G D + VW+ SR ++ GH+
Sbjct: 273 RCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTT----SRRILYKLPGHA 328
Query: 346 DDITALKFSSDGRILLSRSFDGSLKVWDLR 375
I + F D I+LS S D L + +++
Sbjct: 329 GSINEVAFHPDEPIILSASSDKRLYMGEIQ 358
Score = 119 (46.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 37/157 (23%), Positives = 73/157 (46%)
Query: 262 TKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDG 321
T + I++ D +++WD+ + K + R +VT + +G + D
Sbjct: 205 TSDQIISGGIDNDIKVWDLRQNKLTYTM------RGHADSVTGLSLSSEGSYLLSNAMDN 258
Query: 322 SIQVWNLKPGWGSRPDIHVEKG--HSDDITALK--FSSDGRILLSRSFDGSLKVWDLRKM 377
+++VW+++P + + +G H+ + L+ +S DG + + S D + VWD
Sbjct: 259 TVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSR 318
Query: 378 KEPLKVFEDLPNNYAQTN-VAFSPDEQLFLTGTSVER 413
+ + LP + N VAF PDE + L+ +S +R
Sbjct: 319 R----ILYKLPGHAGSINEVAFHPDEPIILSASSDKR 351
Score = 67 (28.6 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 27/140 (19%), Positives = 56/140 (40%)
Query: 143 IVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNL 202
++L GH V +GS + S +D + +++ G ++ L+ G V L
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG---DCDNYATLKGHSG-AVMEL 116
Query: 203 SWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKT 262
++ + ++D + GE VK KGH + +
Sbjct: 117 HYNTDGSMLFSASTDKTVAVWDSE---TGERVK---------RLKGHTSFVNSCYPARRG 164
Query: 263 KETILTSSEDGSLRIWDVNE 282
+ + T S+DG++++WD+ +
Sbjct: 165 PQLVCTGSDDGTVKLWDIRK 184
Score = 63 (27.2 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 141 NEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD 177
N LKGH+ V L + GS + S S D TV ++D
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 138
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 187 (70.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 66/237 (27%), Positives = 118/237 (49%)
Query: 243 LKNTKGHICGL-TCGEWHPKTK--ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGR 299
+K KGH + +C +P + + + T S+DG++++WD+ + K+ Q +
Sbjct: 144 VKRLKGHTSFVNSC---YPARRGPQLVCTGSDDGTVKLWDIRK-KAAIQTFQNTYQV--- 196
Query: 300 VAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRI 359
+AVT D + I+GGI D I+VW+L+ + +GH+D +T L SS+G
Sbjct: 197 LAVTFN--DTSDQIISGGI-DNDIKVWDLR----QNKLTYTMRGHADSVTGLSLSSEGSY 249
Query: 360 LLSRSFDGSLKVWDLRKM--KEP-LKVFEDLPNNYAQT--NVAFSPDEQLFLTGTSVERE 414
LLS + D +++VWD+R KE +K+F+ +N+ + ++SPD G S +R
Sbjct: 250 LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAG-SADR- 307
Query: 415 STTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDK-SQGGTHIL 470
+ +D ++ ++ A S+ + A+HP I T + QGG +L
Sbjct: 308 -----FVYVWDTTSRRILYKLP-GHAGSINEVAFHPD-EPIIETGFHRIGQGGHELL 357
Score = 63 (27.2 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 141 NEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD 177
N LKGH+ V L + GS + S S D TV ++D
Sbjct: 101 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 137
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 130 (50.8 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 264 ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA-VTTCAWDCDGKCIAGGIGDGS 322
E +++ S+D +L +W E K KP G A + + D + +A D S
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDK------KPLARMTGHQALINQVLFSPDSRIVASASFDKS 395
Query: 323 IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLK 382
I++W+ + G + +GH + + +S+D R+L+S S D +LKVWD++ K
Sbjct: 396 IKLWDGRTG----KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK---- 447
Query: 383 VFEDLPNNYAQTN-VAFSPDEQLFLTG 408
+ DLP + + V +SPD Q +G
Sbjct: 448 LATDLPGHADEVYAVDWSPDGQRVASG 474
Score = 125 (49.1 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 40/145 (27%), Positives = 71/145 (48%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSW 204
L+GH++ V ++A +G + SGS D TVR +D +++ F H V ++SW
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD---LSTETPHFTC--KGHRHWVLSISW 164
Query: 205 SPTSDRFLCVTGSAQAKIYDRD-GLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
SP + + Q ++D GL +G + G ++K I GL+ H +
Sbjct: 165 SPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTG--------HSKW-ITGLSWEPLHMNPE 215
Query: 264 -ETILTSSEDGSLRIWDVNEFKSQK 287
+ +SS+DGS+R+WD + ++
Sbjct: 216 CRYVASSSKDGSVRVWDTTAGRCER 240
Score = 118 (46.6 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 41/167 (24%), Positives = 78/167 (46%)
Query: 208 SDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETI 266
S R+ V G ++ D TL + + + L GH + + P ++ +
Sbjct: 330 SSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDK-KPLARMTGHQALINQVLFSPDSR-IV 387
Query: 267 LTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA-VTTCAWDCDGKCIAGGIGDGSIQV 325
++S D S+++WD ++ K + + G VA V AW D + + G D +++V
Sbjct: 388 ASASFDKSIKLWDG---RTGKYLASLR----GHVAAVYQIAWSADSRLLVSGSSDSTLKV 440
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVW 372
W++K D+ GH+D++ A+ +S DG+ + S D L++W
Sbjct: 441 WDVK-AQKLATDL---PGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 104 (41.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 314 IAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWD 373
+ G D ++ +W+ P +P + GH I + FS D RI+ S SFD S+K+WD
Sbjct: 344 LVSGSDDFTLFLWS--PAEDKKPLARMT-GHQALINQVLFSPDSRIVASASFDKSIKLWD 400
Query: 374 LRKMKEPLKVFEDLPNNYAQT-NVAFSPDEQLFLTGTS 410
R K L + A +A+S D +L ++G+S
Sbjct: 401 GRTGK----YLASLRGHVAAVYQIAWSADSRLLVSGSS 434
Score = 47 (21.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMY 176
E +L GHT+ V+ L G + S S D T++++
Sbjct: 239 ERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 180 (68.4 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 52/176 (29%), Positives = 94/176 (53%)
Query: 243 LKNTKGHICGL-TCGEWHPKTK--ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGR 299
+K KGH + +C +P + + + T S+DG++++WD+ + K+ Q +
Sbjct: 145 VKRLKGHTSFVNSC---YPARRGPQLVCTGSDDGTVKLWDIRK-KAAIQTFQNTYQV--- 197
Query: 300 VAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRI 359
+AVT D + I+GGI D I+VW+L+ + +GH+D +T L SS+G
Sbjct: 198 LAVTFN--DTSDQIISGGI-DNDIKVWDLR----QNKLTYTMRGHADSVTGLSLSSEGSY 250
Query: 360 LLSRSFDGSLKVWDLRKM--KEP-LKVFEDLPNNYAQT--NVAFSPDEQLFLTGTS 410
LLS + D +++VWD+R KE +K+F+ +N+ + ++SPD G++
Sbjct: 251 LLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSA 306
Score = 63 (27.2 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 141 NEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD 177
N LKGH+ V L + GS + S S D TV ++D
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWD 138
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 181 (68.8 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 62/225 (27%), Positives = 108/225 (48%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
+K KGH + + + T S+DG++++WD+ + K+ + +V
Sbjct: 134 VKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRK-KASVHTFQNTY----QVLS 188
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
T D + I+GGI D I+VW+L+ I+ +GH D +T L S+DG LLS
Sbjct: 189 VTFN-DTSDQIISGGI-DNDIKVWDLR----QNKLIYSMQGHGDSVTGLSLSADGSYLLS 242
Query: 363 RSFDGSLKVWDLRKM--KEP-LKVFEDLPNNYAQT--NVAFSPDEQLFLTGTSVERESTT 417
S D S++VWD+R KE +K+F+ +N+ + ++S D G S +R
Sbjct: 243 NSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAG-SADR---- 297
Query: 418 GGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDK 462
+ +D +V ++ A SV + A+HP+ + + + DK
Sbjct: 298 --FVYIWDTTTRRIVYKLP-GHAGSVNEVAFHPEEPIVLSGSSDK 339
Score = 127 (49.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 40/157 (25%), Positives = 77/157 (49%)
Query: 262 TKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDG 321
T + I++ D +++WD+ Q ++I + G +VT + DG + D
Sbjct: 194 TSDQIISGGIDNDIKVWDLR----QNKLIY-SMQGHGD-SVTGLSLSADGSYLLSNSMDN 247
Query: 322 SIQVWNLKPGWGSRPDIHVEKG--HSDDITALK--FSSDGRILLSRSFDGSLKVWDLRKM 377
S++VW+++P + + +G H+ + L+ +S+DG + + S D + +WD
Sbjct: 248 SVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTTTR 307
Query: 378 KEPLKVFEDLPNNYAQTN-VAFSPDEQLFLTGTSVER 413
+ K LP + N VAF P+E + L+G+S +R
Sbjct: 308 RIVYK----LPGHAGSVNEVAFHPEEPIVLSGSSDKR 340
Score = 122 (48.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 28/112 (25%), Positives = 55/112 (49%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA--VTTCAWDCDGKCIAGGIGDGSI 323
+L++S D S+R+WD+ F +++ +K + C+W DG IA G D +
Sbjct: 240 LLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFV 299
Query: 324 QVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLR 375
+W+ +R ++ GH+ + + F + I+LS S D L + +++
Sbjct: 300 YIWDTT----TRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGEIQ 347
Score = 69 (29.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 32/140 (22%), Positives = 59/140 (42%)
Query: 143 IVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNL 202
++L GH V +G+ + S YD + M++ G +++ L+ G V L
Sbjct: 50 MLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYG---DCENYATLKGHSG-AVMEL 105
Query: 203 SWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKT 262
++ +D L + S + D T GE VK KGH + +
Sbjct: 106 HYN--TDGSLLFSASTDKTVCVWDSET-GERVK---------RLKGHTSFVNSCFPARRG 153
Query: 263 KETILTSSEDGSLRIWDVNE 282
+ T S+DG++++WD+ +
Sbjct: 154 PQLACTGSDDGTVKLWDIRK 173
Score = 60 (26.2 bits), Expect = 5.4e-13, Sum P(2) = 5.4e-13
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 141 NEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD 177
N LKGH+ V L + GS + S S D TV ++D
Sbjct: 91 NYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWD 127
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 161 (61.7 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 44/151 (29%), Positives = 78/151 (51%)
Query: 240 IRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGR 299
++ K KGH + C ++P++ +++ S D S+RIWDV K + P + P
Sbjct: 153 VKMAKTLKGHTNYVFCCNFNPQSS-LVVSGSFDESVRIWDVRTGMCVKTL--PAHSDP-- 207
Query: 300 VAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRI 359
V+ +++ DG I G DG +++W+ G + + E + + +KFS +G+
Sbjct: 208 --VSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDE---NPPVAFVKFSPNGKY 262
Query: 360 LLSRSFDGSLKVWDLRKMKEPLKVFEDLPNN 390
+LS + D +LK+WD K K LK ++ NN
Sbjct: 263 ILSSNLDNTLKLWDFGKGKT-LKQYQGHENN 292
Score = 153 (58.9 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 44/161 (27%), Positives = 80/161 (49%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA-VTTCA 306
GH G+ W +K +I+T+S+D +L+I++V K K +K G V C
Sbjct: 119 GHKLGVNDFAWSADSK-SIVTASDDKTLKIYEVPTVKMAK-TLK------GHTNYVFCCN 170
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFD 366
++ + G D S+++W+++ G + HSD ++A+ F+ DG ++ S S+D
Sbjct: 171 FNPQSSLVVSGSFDESVRIWDVRTGMC----VKTLPAHSDPVSAVSFNRDGSLITSGSYD 226
Query: 367 GSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLT 407
G +++WD + +K D N V FSP+ + L+
Sbjct: 227 GLVRIWDTAN-GQCVKTLVD-DENPPVAFVKFSPNGKYILS 265
Score = 126 (49.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 32/133 (24%), Positives = 67/133 (50%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
+ +GH ++ ++ P K + TSS D +++IW++++ ++ + KL V
Sbjct: 72 ISTIEGHTKSISAVKFSPCGK-FLGTSSADKTVKIWNMSDLSCERTLTGHKLG------V 124
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
AW D K I D +++++ + P + KGH++ + F+ +++S
Sbjct: 125 NDFAWSADSKSIVTASDDKTLKIYEV-PTVKMAKTL---KGHTNYVFCCNFNPQSSLVVS 180
Query: 363 RSFDGSLKVWDLR 375
SFD S+++WD+R
Sbjct: 181 GSFDESVRIWDVR 193
Score = 82 (33.9 bits), Expect = 8.3e-13, Sum P(2) = 8.3e-13
Identities = 26/94 (27%), Positives = 46/94 (48%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNL 202
++GHTK +SA+ G + + S D TV++++ S L R L GH+ V +
Sbjct: 75 IEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNM----SDLSCERTLT---GHKLGVNDF 127
Query: 203 SWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKG 236
+WS S + + KIY+ + + + +KG
Sbjct: 128 AWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKG 161
Score = 82 (33.9 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 38/158 (24%), Positives = 77/158 (48%)
Query: 265 TILTS-SEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSI 323
+++TS S DG +RIWD + K ++ + P V + +GK I D ++
Sbjct: 218 SLITSGSYDGLVRIWDTANGQCVKTLVDDE--NP---PVAFVKFSPNGKYILSSNLDNTL 272
Query: 324 QVWNLKPGWGSRPDIHVEKGHSDDITAL--KFS-SDGRILLSRSFDGSLKVWDLRKMKEP 380
++W+ +G + +GH ++ + FS + G+ ++S S D + VW+L+ KE
Sbjct: 273 KLWD----FGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQT-KEV 327
Query: 381 LKVFEDLPNNYAQTNVAFS--PDEQLFLTGTSVEREST 416
++ E + Q +A P + + +G ++E ++T
Sbjct: 328 VQSLE----GHTQAVIASDCHPMQNMIASG-ALEPDNT 360
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 132 (51.5 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 43/147 (29%), Positives = 72/147 (48%)
Query: 264 ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA-VTTCAWDCDGKCIAGGIGDGS 322
E +++ S+D +L +W E K KP G A + + D + IA D S
Sbjct: 343 ERLVSGSDDFTLFLWSPAEDK------KPLARMTGHQALINQVVFSPDSRVIASASFDKS 396
Query: 323 IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLK 382
I++W+ + G + +GH + + +S+D R+L+S S D +LKVWD++ K
Sbjct: 397 IKLWDGRTG----KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK---- 448
Query: 383 VFEDLPNNYAQTN-VAFSPDEQLFLTG 408
+ DLP + + V +SPD Q +G
Sbjct: 449 LSTDLPGHADEVYAVDWSPDGQRVASG 475
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 36/133 (27%), Positives = 67/133 (50%)
Query: 241 RDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV 300
+ L GH + + P ++ I ++S D S+++WD ++ K + + G V
Sbjct: 364 KPLARMTGHQALINQVVFSPDSR-VIASASFDKSIKLWDG---RTGKYLASLR----GHV 415
Query: 301 A-VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRI 359
A V AW D + + G D +++VW++K S D+ GH+D++ A+ +S DG+
Sbjct: 416 AAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLST-DL---PGHADEVYAVDWSPDGQR 471
Query: 360 LLSRSFDGSLKVW 372
+ S D L++W
Sbjct: 472 VASGGKDKCLRIW 484
Score = 117 (46.2 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 43/149 (28%), Positives = 73/149 (48%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNL 202
L+GH++ V ++A +G + SGS D TVR +D +++ F +GH+ V ++
Sbjct: 111 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD---LSTETPHFT----CQGHRHWVLSI 163
Query: 203 SWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHP-- 260
SWSP + + Q ++D + G+ V G R L GH +T W P
Sbjct: 164 SWSPDGKKLASGCKNGQILLWDP---STGKQV-G----RALT---GHSKWITALSWEPLH 212
Query: 261 KTKET--ILTSSEDGSLRIWDVNEFKSQK 287
E + +SS+DGS+R+WD + ++
Sbjct: 213 ANPECRYVASSSKDGSVRVWDTTAGRCER 241
Score = 104 (41.7 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 30/98 (30%), Positives = 49/98 (50%)
Query: 314 IAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWD 373
+ G D ++ +W+ P +P + GH I + FS D R++ S SFD S+K+WD
Sbjct: 345 LVSGSDDFTLFLWS--PAEDKKPLARMT-GHQALINQVVFSPDSRVIASASFDKSIKLWD 401
Query: 374 LRKMKEPLKVFEDLPNNYAQT-NVAFSPDEQLFLTGTS 410
R K L + A +A+S D +L ++G+S
Sbjct: 402 GRTGK----YLASLRGHVAAVYQIAWSADSRLLVSGSS 435
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 130 (50.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 264 ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA-VTTCAWDCDGKCIAGGIGDGS 322
E +++ S+D +L +W E K KP G A + + D + +A D S
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDK------KPLTRMTGHQALINQVLFSPDSRIVASASFDKS 395
Query: 323 IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLK 382
I++W+ + G + +GH + + +S+D R+L+S S D +LKVWD++ K +
Sbjct: 396 IKLWDGRTG----KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAM- 450
Query: 383 VFEDLPNNYAQTN-VAFSPDEQLFLTG 408
DLP + + V +SPD Q +G
Sbjct: 451 ---DLPGHADEVYAVDWSPDGQRVASG 474
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 36/131 (27%), Positives = 67/131 (51%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
KGH + W P ++ + + ++G + +WD + + KQV + LA + +T +
Sbjct: 153 KGHRHWVLSISWSPDGRK-LASGCKNGQILLWDPS---TGKQVGRT-LAGHSKW-ITGLS 206
Query: 307 WD---CDGKC--IAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
W+ + +C +A DGS+++W+ G R + GH+ +T L++ DG +L
Sbjct: 207 WEPLHANPECRYVASSSKDGSVRIWDTTAGRCER----ILTGHTQSVTCLRWGGDG-LLY 261
Query: 362 SRSFDGSLKVW 372
S S D ++KVW
Sbjct: 262 SASQDRTIKVW 272
Score = 119 (46.9 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 40/145 (27%), Positives = 70/145 (48%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSW 204
L+GH++ V ++A +G + SGS D TVR +D +++ F H V ++SW
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD---LSTETPHFTC--KGHRHWVLSISW 164
Query: 205 SPTSDRFLCVTGSAQAKIYDRD-GLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
SP + + Q ++D G +G + G ++K I GL+ H +
Sbjct: 165 SPDGRKLASGCKNGQILLWDPSTGKQVGRTLAG--------HSKW-ITGLSWEPLHANPE 215
Query: 264 -ETILTSSEDGSLRIWDVNEFKSQK 287
+ +SS+DGS+RIWD + ++
Sbjct: 216 CRYVASSSKDGSVRIWDTTAGRCER 240
Score = 104 (41.7 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 314 IAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWD 373
+ G D ++ +W+ P +P + GH I + FS D RI+ S SFD S+K+WD
Sbjct: 344 LVSGSDDFTLFLWS--PAEDKKPLTRMT-GHQALINQVLFSPDSRIVASASFDKSIKLWD 400
Query: 374 LRKMKEPLKVFEDLPNNYAQT-NVAFSPDEQLFLTGTS 410
R K L + A +A+S D +L ++G+S
Sbjct: 401 GRTGK----YLASLRGHVAAVYQIAWSADSRLLVSGSS 434
Score = 47 (21.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMY 176
E +L GHT+ V+ L G + S S D T++++
Sbjct: 239 ERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 130 (50.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 264 ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA-VTTCAWDCDGKCIAGGIGDGS 322
E +++ S+D +L +W E K KP G A + + D + +A D S
Sbjct: 344 ERLVSGSDDFTLFLWSPAEDK------KPLARMTGHQALINQVLFSPDSRIVASASFDKS 397
Query: 323 IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLK 382
I++W+ + G + +GH + + +S+D R+L+S S D +LKVWD++ K
Sbjct: 398 IKLWDGRTG----KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK---- 449
Query: 383 VFEDLPNNYAQTN-VAFSPDEQLFLTG 408
+ DLP + + V +SPD Q +G
Sbjct: 450 LTTDLPGHADEVYAVDWSPDGQRVASG 476
Score = 119 (46.9 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 39/145 (26%), Positives = 70/145 (48%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSW 204
L+GH++ V ++A +G + SGS D TVR +D +++ F H V ++SW
Sbjct: 112 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD---LSTETPHFTC--KGHRHWVLSISW 166
Query: 205 SPTSDRFLCVTGSAQAKIYDRD-GLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
SP + + Q ++D G +G + G ++K I GL+ H +
Sbjct: 167 SPDGKKLASGCKNGQILLWDPSTGTQVGRTLTG--------HSKW-ITGLSWEPLHMNPE 217
Query: 264 -ETILTSSEDGSLRIWDVNEFKSQK 287
+ +SS+DGS+R+WD + ++
Sbjct: 218 CRYVASSSKDGSVRVWDTTAGRCER 242
Score = 118 (46.6 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 41/167 (24%), Positives = 78/167 (46%)
Query: 208 SDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETI 266
S R+ V G ++ D TL + + + L GH + + P ++ +
Sbjct: 332 SSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDK-KPLARMTGHQALINQVLFSPDSR-IV 389
Query: 267 LTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA-VTTCAWDCDGKCIAGGIGDGSIQV 325
++S D S+++WD ++ K + + G VA V AW D + + G D +++V
Sbjct: 390 ASASFDKSIKLWDG---RTGKYLASLR----GHVAAVYQIAWSADSRLLVSGSSDSTLKV 442
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVW 372
W++K D+ GH+D++ A+ +S DG+ + S D L++W
Sbjct: 443 WDVK-AQKLTTDL---PGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 104 (41.7 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 314 IAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWD 373
+ G D ++ +W+ P +P + GH I + FS D RI+ S SFD S+K+WD
Sbjct: 346 LVSGSDDFTLFLWS--PAEDKKPLARMT-GHQALINQVLFSPDSRIVASASFDKSIKLWD 402
Query: 374 LRKMKEPLKVFEDLPNNYAQT-NVAFSPDEQLFLTGTS 410
R K L + A +A+S D +L ++G+S
Sbjct: 403 GRTGK----YLASLRGHVAAVYQIAWSADSRLLVSGSS 436
Score = 47 (21.6 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMY 176
E +L GHT+ V+ L G + S S D T++++
Sbjct: 241 ERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 274
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 131 (51.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 43/147 (29%), Positives = 72/147 (48%)
Query: 264 ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA-VTTCAWDCDGKCIAGGIGDGS 322
E +++ S+D +L +W E K KP G A + + D + IA D S
Sbjct: 342 ERLVSGSDDFTLFLWSPAEDK------KPLARMTGHQALINQVLFSPDSRIIASASFDKS 395
Query: 323 IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLK 382
I++W+ + G + +GH + + +S+D R+L+S S D +LKVWD++ K
Sbjct: 396 IKLWDGRTG----KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK---- 447
Query: 383 VFEDLPNNYAQTN-VAFSPDEQLFLTG 408
+ DLP + + V +SPD Q +G
Sbjct: 448 LAADLPGHADEVYAVDWSPDGQRVASG 474
Score = 122 (48.0 bits), Expect = 0.00036, P = 0.00036
Identities = 37/131 (28%), Positives = 67/131 (51%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+GH + W P K+ + + ++G + +WD + + KQV + LA + +T +
Sbjct: 153 QGHRHWVLSISWSPDGKK-LASGCKNGQILLWDPS---TGKQVGRA-LAGHSKW-ITALS 206
Query: 307 WD---CDGKC--IAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
W+ + +C +A DGS++VW+ G R + GH+ +T L++ DG +L
Sbjct: 207 WEPLHANPECRYVASSSKDGSVRVWDTTAGRCER----ILTGHTQSVTCLRWGGDG-LLY 261
Query: 362 SRSFDGSLKVW 372
S S D ++KVW
Sbjct: 262 SASQDRTIKVW 272
Score = 117 (46.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 43/149 (28%), Positives = 73/149 (48%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNL 202
L+GH++ V ++A +G + SGS D TVR +D +++ F +GH+ V ++
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD---LSTETPHFT----CQGHRHWVLSI 162
Query: 203 SWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHP-- 260
SWSP + + Q ++D + G+ V G R L GH +T W P
Sbjct: 163 SWSPDGKKLASGCKNGQILLWDP---STGKQV-G----RALA---GHSKWITALSWEPLH 211
Query: 261 KTKET--ILTSSEDGSLRIWDVNEFKSQK 287
E + +SS+DGS+R+WD + ++
Sbjct: 212 ANPECRYVASSSKDGSVRVWDTTAGRCER 240
Score = 117 (46.2 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 35/133 (26%), Positives = 66/133 (49%)
Query: 241 RDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV 300
+ L GH + + P ++ I ++S D S+++WD ++ K + + G V
Sbjct: 363 KPLARMTGHQALINQVLFSPDSR-IIASASFDKSIKLWDG---RTGKYLASLR----GHV 414
Query: 301 A-VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRI 359
A V AW D + + G D +++VW++K D+ GH+D++ A+ +S DG+
Sbjct: 415 AAVYQIAWSADSRLLVSGSSDSTLKVWDVK-AQKLAADL---PGHADEVYAVDWSPDGQR 470
Query: 360 LLSRSFDGSLKVW 372
+ S D L++W
Sbjct: 471 VASGGKDKCLRIW 483
Score = 105 (42.0 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 314 IAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWD 373
+ G D ++ +W+ P +P + GH I + FS D RI+ S SFD S+K+WD
Sbjct: 344 LVSGSDDFTLFLWS--PAEDKKPLARMT-GHQALINQVLFSPDSRIIASASFDKSIKLWD 400
Query: 374 LRKMKEPLKVFEDLPNNYAQT-NVAFSPDEQLFLTGTS 410
R K L + A +A+S D +L ++G+S
Sbjct: 401 GRTGK----YLASLRGHVAAVYQIAWSADSRLLVSGSS 434
Score = 47 (21.6 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMY 176
E +L GHT+ V+ L G + S S D T++++
Sbjct: 239 ERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 164 (62.8 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 43/166 (25%), Positives = 83/166 (50%)
Query: 244 KNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVT 303
K GH G++ W ++ +++ S+D +L++W+++ KS K + + V
Sbjct: 108 KTISGHKLGISDVAWSSDSR-LLVSGSDDKTLKVWELSTGKSLKTL------KGHSNYVF 160
Query: 304 TCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR 363
C ++ I G D S+++W+++ G + HSD ++A+ F+ DG +++S
Sbjct: 161 CCNFNPQSNLIVSGSFDESVRIWDVRTG----KCLKTLPAHSDPVSAVHFNRDGSLIVSS 216
Query: 364 SFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
S+DG ++WD + LK D +N + V FSP+ + L T
Sbjct: 217 SYDGLCRIWDTAS-GQCLKTLID-DDNPPVSFVKFSPNGKYILAAT 260
Score = 156 (60.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 39/137 (28%), Positives = 68/137 (49%)
Query: 243 LKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
LK T GH ++ ++ P E + +SS D ++IW + K +K + KL
Sbjct: 64 LKFTLAGHTKAVSAVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLG------ 116
Query: 302 VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
++ AW D + + G D +++VW L G + KGHS+ + F+ +++
Sbjct: 117 ISDVAWSSDSRLLVSGSDDKTLKVWELSTG----KSLKTLKGHSNYVFCCNFNPQSNLIV 172
Query: 362 SRSFDGSLKVWDLRKMK 378
S SFD S+++WD+R K
Sbjct: 173 SGSFDESVRIWDVRTGK 189
Score = 151 (58.2 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
Identities = 60/226 (26%), Positives = 103/226 (45%)
Query: 241 RDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV 300
+ LK KGH + C ++P++ I++ S D S+RIWDV K K + P + P
Sbjct: 147 KSLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVRTGKCLKTL--PAHSDP--- 200
Query: 301 AVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL 360
V+ ++ DG I DG ++W+ G + I + + ++ +KFS +G+ +
Sbjct: 201 -VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD---NPPVSFVKFSPNGKYI 256
Query: 361 LSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGL 420
L+ + D +LK+WD K K LK + N FS +TG + +
Sbjct: 257 LAATLDNTLKLWDYSKGK-CLKTYTGHKNEKYCIFANFS------VTGGKWIVSGSEDNM 309
Query: 421 LCFYDREKLELVSRVGISPACSVVQC-AWHPKLNQIFATA--GDKS 463
+ ++ + E+V + + V C A HP N I + A DK+
Sbjct: 310 VYIWNLQSKEVVQK--LQGHTDTVLCTACHPTENIIASAALENDKT 353
Score = 76 (31.8 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 35/132 (26%), Positives = 53/132 (40%)
Query: 91 GPPRPPQQQEDDADSVMIGPPRPPAXXXXXXXXXXXXXXXXXNRHQIPMSNEIVLK---- 146
G PPQQ A S GP N+ + + LK
Sbjct: 13 GVVHPPQQPLPTAPS---GPNSLQPNSVGQPGATTSSNSSASNKSSLSVKPNYTLKFTLA 69
Query: 147 GHTKIVSALAVDHSGSRVLSGSYDYTVRMYD-FQGMNSRLQSFRQLEPSEGHQVRNLSWS 205
GHTK VSA+ +G + S S D ++++ + G + S +L G + +++WS
Sbjct: 70 GHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL----G--ISDVAWS 123
Query: 206 PTSDRFLCVTGS 217
SD L V+GS
Sbjct: 124 --SDSRLLVSGS 133
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 130 (50.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 43/147 (29%), Positives = 72/147 (48%)
Query: 264 ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA-VTTCAWDCDGKCIAGGIGDGS 322
E +++ S+D +L +W E K KP G A + + D + IA D S
Sbjct: 293 ERLVSGSDDFTLFMWSPAEDK------KPLARMTGHQALINQVLFSPDSRIIASASFDKS 346
Query: 323 IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLK 382
I++W+ + G + +GH + + +S+D R+L+S S D +LKVWD++ K
Sbjct: 347 IKLWDGRTG----KYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQK---- 398
Query: 383 VFEDLPNNYAQTN-VAFSPDEQLFLTG 408
+ DLP + + V +SPD Q +G
Sbjct: 399 LAADLPGHADEVYAVDWSPDGQRVASG 425
Score = 121 (47.7 bits), Expect = 0.00039, P = 0.00039
Identities = 37/131 (28%), Positives = 65/131 (49%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+GH + W P K T+ + ++G + +WD + K +V LA + +T +
Sbjct: 104 QGHRHWVLSISWSPDGK-TLASGCKNGQILLWDPSTGKQVGRV----LAGHSKW-ITGLS 157
Query: 307 WD---CDGKC--IAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
W+ + +C +A DGS++VW+ G R + GH+ +T L++ DG +L
Sbjct: 158 WEPLHANPECRYMASSSKDGSVRVWDTTAGRCER----ILTGHTQSVTCLRWGGDG-LLY 212
Query: 362 SRSFDGSLKVW 372
S S D ++KVW
Sbjct: 213 SASQDRTIKVW 223
Score = 118 (46.6 bits), Expect = 0.00083, P = 0.00083
Identities = 41/139 (29%), Positives = 65/139 (46%)
Query: 241 RDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPG-R 299
R + +GH + + P T + + + S D ++R WD++ P G R
Sbjct: 56 RCTSSLEGHSEAVISVAFSP-TGKYLASGSGDTTVRFWDLS-------TETPHFTCQGHR 107
Query: 300 VAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKF-----S 354
V + +W DGK +A G +G I +W+ P G + V GHS IT L + +
Sbjct: 108 HWVLSISWSPDGKTLASGCKNGQILLWD--PSTGKQVG-RVLAGHSKWITGLSWEPLHAN 164
Query: 355 SDGRILLSRSFDGSLKVWD 373
+ R + S S DGS++VWD
Sbjct: 165 PECRYMASSSKDGSVRVWD 183
Score = 117 (46.2 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 35/133 (26%), Positives = 66/133 (49%)
Query: 241 RDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV 300
+ L GH + + P ++ I ++S D S+++WD ++ K + + G V
Sbjct: 314 KPLARMTGHQALINQVLFSPDSR-IIASASFDKSIKLWDG---RTGKYLASLR----GHV 365
Query: 301 A-VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRI 359
A V AW D + + G D +++VW++K D+ GH+D++ A+ +S DG+
Sbjct: 366 AAVYQIAWSADSRLLVSGSSDSTLKVWDVK-AQKLAADL---PGHADEVYAVDWSPDGQR 421
Query: 360 LLSRSFDGSLKVW 372
+ S D L++W
Sbjct: 422 VASGGKDKCLRIW 434
Score = 116 (45.9 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 40/147 (27%), Positives = 72/147 (48%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNL 202
L+GH++ V ++A +G + SGS D TVR +D +++ F +GH+ V ++
Sbjct: 61 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWD---LSTETPHFT----CQGHRHWVLSI 113
Query: 203 SWSPTSDRFLCVTGSAQAKIYDRD-GLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPK 261
SWSP + Q ++D G +G + G ++K I GL+ H
Sbjct: 114 SWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAG--------HSKW-ITGLSWEPLHAN 164
Query: 262 TK-ETILTSSEDGSLRIWDVNEFKSQK 287
+ + +SS+DGS+R+WD + ++
Sbjct: 165 PECRYMASSSKDGSVRVWDTTAGRCER 191
Score = 105 (42.0 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 314 IAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWD 373
+ G D ++ +W+ P +P + GH I + FS D RI+ S SFD S+K+WD
Sbjct: 295 LVSGSDDFTLFMWS--PAEDKKPLARMT-GHQALINQVLFSPDSRIIASASFDKSIKLWD 351
Query: 374 LRKMKEPLKVFEDLPNNYAQT-NVAFSPDEQLFLTGTS 410
R K L + A +A+S D +L ++G+S
Sbjct: 352 GRTGK----YLASLRGHVAAVYQIAWSADSRLLVSGSS 385
Score = 47 (21.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMY 176
E +L GHT+ V+ L G + S S D T++++
Sbjct: 190 ERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 223
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 127 (49.8 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 43/139 (30%), Positives = 68/139 (48%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSW 204
L+GHT+ V ++A +G + SGS D TVR +D +++ F H V +++W
Sbjct: 123 LEGHTEAVISVAFSPTGKYLASGSGDTTVRFWD---LSTETPQFTA--KGHRHWVLSIAW 177
Query: 205 SPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPK--T 262
SP + +G ++I+ D T G+ R L GH +TC W P
Sbjct: 178 SPDGKKL--ASGCKNSQIFLWDPAT------GNQIGRVLT---GHSKWITCLCWEPLHIN 226
Query: 263 KET--ILTSSEDGSLRIWD 279
E + ++S+DGS+RIWD
Sbjct: 227 PECRYLASASKDGSIRIWD 245
Score = 120 (47.3 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 43/147 (29%), Positives = 69/147 (46%)
Query: 264 ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA-VTTCAWDCDGKCIAGGIGDGS 322
E +++ S+D +L +W E K KP G A + + D + IA D S
Sbjct: 355 ERLVSGSDDFTLFLWRPAEDK------KPLERMTGHQALINQVLFSPDTRIIASASFDKS 408
Query: 323 IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLK 382
I++W + G + +GH + + +S+D R+L+S S D +LKVWD E K
Sbjct: 409 IKLWEGRTG----KYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDA----ETKK 460
Query: 383 VFEDLPNNYAQTNVA-FSPDEQLFLTG 408
+ DLP + + +SPD Q +G
Sbjct: 461 LAIDLPGHADEVFATDWSPDGQRVASG 487
Score = 103 (41.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 41/149 (27%), Positives = 68/149 (45%)
Query: 314 IAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWD 373
+ G D ++ +W +P +P + GH I + FS D RI+ S SFD S+K+W+
Sbjct: 357 LVSGSDDFTLFLW--RPAEDKKP-LERMTGHQALINQVLFSPDTRIIASASFDKSIKLWE 413
Query: 374 LRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVS 433
R K + + Y +A+S D +L ++G+S +ST L +D E +L
Sbjct: 414 GRTGKYLTSLRGHVSAVY---QIAWSADSRLLVSGSS---DST----LKVWDAETKKLAI 463
Query: 434 RVGISPACSVVQCAWHPKLNQIFATAGDK 462
+ A V W P ++ + DK
Sbjct: 464 DLP-GHADEVFATDWSPDGQRVASGGKDK 491
Score = 64 (27.6 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 34/140 (24%), Positives = 60/140 (42%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--V 199
+ KGH V ++A G ++ SG + + ++D N Q R L GH +
Sbjct: 162 QFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGN---QIGRVLT---GHSKWI 215
Query: 200 RNLSWSPTSDRFLCVTGSAQAKIYDRDG-LTLGEFVKGDMYIRDLKNTKGHICGLTCGEW 258
L W P C ++ +K DG + + + + G R K GH +TC +W
Sbjct: 216 TCLCWEPLHINPECRYLASASK----DGSIRIWDTLMG----RCDKILTGHTQSVTCVKW 267
Query: 259 HPKTKETILTSSEDGSLRIW 278
+ +SS+D ++++W
Sbjct: 268 GGDG--LLYSSSQDRTIKVW 285
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 185 (70.2 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 53/175 (30%), Positives = 88/175 (50%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH+ + C ++HP + I T S D ++R+W S +Q +L R V T A+
Sbjct: 436 GHLSDVDCVKFHPNSNY-IATGSTDKTVRLW------STRQGASVRLFTGHRGPVLTLAF 488
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDG 367
+GK +A D +++W+L G G D+ +GH+D I++L FS D ++ S S D
Sbjct: 489 SPNGKYLASAGEDQRLKLWDLASG-GLFKDL---RGHTDTISSLSFSQDSSLVASASMDN 544
Query: 368 SLKVWDLRKM--KEPLK-VFEDLPNNYAQT-----NVAFSPDEQLFLTGTSVERE 414
+++VWD+R P +L Y + NV F L +TGT++E++
Sbjct: 545 TVRVWDIRNAHGSAPTDGCSSELIGQYTGSTSNILNVQFMACNLLLVTGTAMEKQ 599
Score = 55 (24.4 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 29/88 (32%), Positives = 42/88 (47%)
Query: 141 NEI-VLKGHTKIV--SALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGH 197
+EI L+GH+ V +A D SG +LS S D TVR +D L+SF GH
Sbjct: 345 SEIKTLRGHSGPVYRTAFLTDASG--LLSCSEDSTVRYWD-------LKSFTNTVLYRGH 395
Query: 198 Q--VRNLSWSPTSDRFLCVTGSAQAKIY 223
V ++ SP S F + A+++
Sbjct: 396 AYPVWDVDVSPCSLYFSTASHDRTARLW 423
Score = 43 (20.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 140 SNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDF 178
+N ++ +GH V + V + S+D T R++ F
Sbjct: 387 TNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSF 425
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 154 (59.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 58/233 (24%), Positives = 109/233 (46%)
Query: 234 VKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPK 293
V+ ++ LK K ++ G++ ++P++ I++ S D ++RIWDVN + K +
Sbjct: 117 VESGKMVKTLKGHKEYVFGVS---FNPQSN-LIVSGSFDENVRIWDVNTGECTKMISAH- 171
Query: 294 LARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKF 353
+ P VT ++ DG + G DG++++W+ G I E G +++ +KF
Sbjct: 172 -SDP----VTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNT-ISTEDGK--EVSFVKF 223
Query: 354 SSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPD-EQLFLTGTSVE 412
S +G+ +L+ + D +L++W K+ LK + N FS + +TG+
Sbjct: 224 SPNGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSE-- 281
Query: 413 RESTTGGLLCFYDREKLELVSRV-GISPACSVVQCAWHPKLNQIFATAGDKSQ 464
L+ Y+ + E+V + G V C HP N I + A +K +
Sbjct: 282 -----DNLIYIYNLQTREIVQTLAGHEDVVLTVAC--HPTENIIASGALEKDR 327
Score = 154 (59.3 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 43/166 (25%), Positives = 85/166 (51%)
Query: 244 KNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVT 303
+ +GH G++ W +K I ++S+D +++IWDV +S K V K + + V
Sbjct: 82 RTLEGHKEGISDIAWSQDSK-LICSASDDKTIKIWDV---ESGKMV---KTLKGHKEYVF 134
Query: 304 TCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR 363
+++ I G D ++++W++ G ++ + HSD +T + F+ DG +++S
Sbjct: 135 GVSFNPQSNLIVSGSFDENVRIWDVNTGECTK----MISAHSDPVTGVHFNRDGTLVVSG 190
Query: 364 SFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
S+DG++++WD + L + + V FSP+ + L GT
Sbjct: 191 SYDGTVRIWDTTT-GQLLNTIST-EDGKEVSFVKFSPNGKFVLAGT 234
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 31/111 (27%), Positives = 60/111 (54%)
Query: 301 AVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL 360
++++ + DGK +A D +I++W G R +E GH + I+ + +S D +++
Sbjct: 48 SISSVKFSPDGKWLASASADKTIKIWGAYDGKFERT---LE-GHKEGISDIAWSQDSKLI 103
Query: 361 LSRSFDGSLKVWDLR--KMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
S S D ++K+WD+ KM + LK ++ Y V+F+P L ++G+
Sbjct: 104 CSASDDKTIKIWDVESGKMVKTLKGHKE----YV-FGVSFNPQSNLIVSGS 149
Score = 77 (32.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 24/94 (25%), Positives = 46/94 (48%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNL 202
LKGH K +S++ G + S S D T++++ + + + R LE GH+ + ++
Sbjct: 42 LKGHLKSISSVKFSPDGKWLASASADKTIKIWG--AYDGKFE--RTLE---GHKEGISDI 94
Query: 203 SWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKG 236
+WS S + KI+D + + + +KG
Sbjct: 95 AWSQDSKLICSASDDKTIKIWDVESGKMVKTLKG 128
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 139 (54.0 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 46/148 (31%), Positives = 77/148 (52%)
Query: 262 TKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDG 321
++E ++T+S+D ++ +W N KS K + + + V A+ DG+ I D
Sbjct: 370 SEEMMVTASDDYTMFLW--NPLKSTKPIAR---MTGHQKLVNHVAFSPDGRYIVSASFDN 424
Query: 322 SIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPL 381
SI++W+ + G I +GH + + +SSD R+L+S S D +LKVWD+R K L
Sbjct: 425 SIKLWDGRDG----KFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRK--L 478
Query: 382 KVFEDLPNNYAQT-NVAFSPDEQLFLTG 408
V DLP + + V +S D + +G
Sbjct: 479 SV--DLPGHKDEVYTVDWSVDGKRVCSG 504
Score = 129 (50.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 50/191 (26%), Positives = 86/191 (45%)
Query: 203 SWSP-TSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPK 261
+++P TS R + G A+I+D D T + KGH + C W P
Sbjct: 150 AFAPHTSSRMVTGAGDNTARIWDCDTQT------------PMHTLKGHYNWVLCVSWSPD 197
Query: 262 TKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDC-----DGKC--I 314
E I T S D ++R+WD KS Q + L R +T+ +W+ G +
Sbjct: 198 G-EVIATGSMDNTIRLWDP---KSG-QCLGDAL-RGHSKWITSLSWEPIHLVKPGSKPRL 251
Query: 315 AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
A DG+I++W+ SR + GH++ ++ +K+ G +L S S D +++VWD+
Sbjct: 252 ASSSKDGTIKIWDTV----SRVCQYTMSGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDI 306
Query: 375 RKMKEPLKVFE 385
+ + +
Sbjct: 307 NSQGRCINILK 317
Score = 128 (50.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 39/134 (29%), Positives = 63/134 (47%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTC-A 306
GH + C + P T ++T + D + RIWD + ++ +K G C +
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDT-QTPMHTLK------GHYNWVLCVS 193
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRI------- 359
W DG+ IA G D +I++W+ K G + +GHS IT+L + +
Sbjct: 194 WSPDGEVIATGSMDNTIRLWDPKSGQCLGDAL---RGHSKWITSLSWEPIHLVKPGSKPR 250
Query: 360 LLSRSFDGSLKVWD 373
L S S DG++K+WD
Sbjct: 251 LASSSKDGTIKIWD 264
Score = 99 (39.9 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 41/150 (27%), Positives = 67/150 (44%)
Query: 136 QIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSE 195
Q PM LKGH V ++ G + +GS D T+R++D + + R
Sbjct: 176 QTPMHT---LKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALR------ 226
Query: 196 GHQ--VRNLSWSPTSDRFLCVTGSA-QAKIYDRDGLTLGEFVKGDMYIRDLKNT-KGHIC 251
GH + +LSW P L GS + +DG T+ + D R + T GH
Sbjct: 227 GHSKWITSLSWEPIH---LVKPGSKPRLASSSKDG-TIKIW---DTVSRVCQYTMSGHTN 279
Query: 252 GLTCGEWHPKTKETILTSSEDGSLRIWDVN 281
++C +W + + + S D ++R+WD+N
Sbjct: 280 SVSCVKWGGQG--LLYSGSHDRTVRVWDIN 307
Score = 37 (18.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 525 LKDPIKSHKPEVPVTG 540
L +P+KS KP +TG
Sbjct: 385 LWNPLKSTKPIARMTG 400
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 187 (70.9 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 54/179 (30%), Positives = 90/179 (50%)
Query: 237 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLAR 296
D Y + L+ GH+ +TC +HP + I T S D ++R+WDV ++
Sbjct: 595 DHY-QPLRIFAGHLADVTCTRFHPNSNY-IATGSADRTVRLWDV----LNGNCVRIFTGH 648
Query: 297 PGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSD 356
G + + A+ +G+ +A G DG + +W++ G G + KGH+D I AL+FS D
Sbjct: 649 KG--PIHSLAFSPNGRFLATGATDGRVLLWDI--GHGLM--VGELKGHTDTIYALRFSRD 702
Query: 357 GRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERES 415
G IL S S D ++++WD K E L+ +D A ++ + Q L GT + + +
Sbjct: 703 GEILASGSMDNTVRLWDAVKAFEDLET-DDFTT--ATGHINLPENSQDLLLGTYMTKST 758
Score = 48 (22.0 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 23/85 (27%), Positives = 38/85 (44%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
+L GH+ V + + +LS S D TVR++ LQ+F L +GH V +
Sbjct: 518 ILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWS-------LQTFTCLVGYKGHNYPVWD 570
Query: 202 LSWSPTSDRFLCVTGSAQAKIYDRD 226
+SP F+ A+++ D
Sbjct: 571 TQFSPYGYYFVSGGHDRVARLWATD 595
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 162 (62.1 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 42/151 (27%), Positives = 78/151 (51%)
Query: 263 KETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCD--GKCIAGGIGD 320
+E I+ S+ GS+R+WD+ K +++ + + C+ D G+ +A G D
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAK----ILRTLMGHKANI----CSLDFHPYGEFVASGSQD 126
Query: 321 GSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEP 380
+I++W+++ + + +GHS + L+FS DG+ L S + D ++K+WDL K
Sbjct: 127 TNIKLWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK-- 180
Query: 381 LKVFEDLPNNYAQTNVA-FSPDEQLFLTGTS 410
+ + P + NV F P+E L +G+S
Sbjct: 181 --MMSEFPGHTGPVNVVEFHPNEYLLASGSS 209
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 170 (64.9 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 46/166 (27%), Positives = 82/166 (49%)
Query: 244 KNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVT 303
K GH G++ W + ++++S+D +L+IWDV+ K K + + V
Sbjct: 55 KTISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTL------KGHSNYVF 107
Query: 304 TCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR 363
C ++ I G D S+++W++K G + HSD ++A+ F+ DG +++S
Sbjct: 108 CCNFNPQSNLIVSGSFDESVRIWDVKTG----KCLKTLPAHSDPVSAVHFNRDGSLIVSS 163
Query: 364 SFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
S+DG ++WD + LK D +N + V FSP+ + L T
Sbjct: 164 SYDGLCRIWDTAS-GQCLKTLID-DDNPPVSFVKFSPNGKYILAAT 207
Score = 153 (58.9 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 61/224 (27%), Positives = 104/224 (46%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
LK KGH + C ++P++ I++ S D S+RIWDV K K + P + P V
Sbjct: 96 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTL--PAHSDP----V 148
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
+ ++ DG I DG ++W+ G + I + + ++ +KFS +G+ +L+
Sbjct: 149 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD---NPPVSFVKFSPNGKYILA 205
Query: 363 RSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLC 422
+ D +LK+WD K K LK + N FS +TG + L+
Sbjct: 206 ATLDNTLKLWDYSKGK-CLKTYTGHKNEKYCIFANFS------VTGGKWIVSGSEDNLVY 258
Query: 423 FYDREKLELVSRV-GISPACSVVQCAWHPKLNQIFATA--GDKS 463
++ + E+V ++ G + V+ A HP N I + A DK+
Sbjct: 259 IWNLQTKEIVQKLQGHTDV--VISTACHPTENIIASAALENDKT 300
Score = 138 (53.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 35/137 (25%), Positives = 67/137 (48%)
Query: 243 LKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
LK T GH ++ ++ P E + +SS D ++IW + K +K + KL
Sbjct: 11 LKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLG------ 63
Query: 302 VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
++ AW D + D ++++W++ G + KGHS+ + F+ +++
Sbjct: 64 ISDVAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFCCNFNPQSNLIV 119
Query: 362 SRSFDGSLKVWDLRKMK 378
S SFD S+++WD++ K
Sbjct: 120 SGSFDESVRIWDVKTGK 136
Score = 68 (29.0 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD-FQGMNSRLQSFRQLEPSEGHQVR 200
+ L GHTK VS++ +G + S S D ++++ + G + S +L G +
Sbjct: 12 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL----G--IS 65
Query: 201 NLSWSPTSDRFLCVTGSAQAKIYD 224
+++WS S+ + + KI+D
Sbjct: 66 DVAWSSDSNLLVSASDDKTLKIWD 89
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 182 (69.1 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 54/174 (31%), Positives = 87/174 (50%)
Query: 237 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLAR 296
D Y + L+ GH+ +TC +HP + + T S D ++R+WDV ++
Sbjct: 571 DHY-QPLRIFAGHLADVTCTRFHPNSNY-VATGSSDRTVRLWDV----LNGNCVRIFTGH 624
Query: 297 PGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSD 356
G + + A+ +GK +A G DG + +W++ G G I KGH+ I ALKFS D
Sbjct: 625 KG--PIHSLAFSPNGKFLASGSTDGRVLLWDI--GHGLM--IAELKGHTGTIYALKFSRD 678
Query: 357 GRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDE-QLFLTGT 409
G I+ S S D ++++WD+ + + ++ +D A T PD Q L GT
Sbjct: 679 GEIIASGSIDNTVRLWDVMRAIDDVET-DDFT---AATGHIHLPDNSQELLLGT 728
Score = 54 (24.1 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 23/89 (25%), Positives = 40/89 (44%)
Query: 140 SNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ- 198
S +L GH+ V ++ + +LS S D T+R++ LQ+F L +GH
Sbjct: 490 SESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWS-------LQTFTCLVGYKGHNY 542
Query: 199 -VRNLSWSPTSDRFLCVTGSAQAKIYDRD 226
V + +SP F+ A+++ D
Sbjct: 543 PVWDTQFSPFGYYFVSGGHDRVARLWATD 571
Score = 39 (18.8 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 8 GKQAKSQTPLEKIHNATRRSDPLTTTTAATDNEKNNLPSISSSSK 52
GK K +T + + + +++ DP A + LP + S K
Sbjct: 354 GKPKKKKTKKDSMGSKSKKQDP-----NAPQQNRIPLPELKDSDK 393
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 160 (61.4 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 44/144 (30%), Positives = 75/144 (52%)
Query: 239 YIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPG 298
+I L+ GH+ + C +HP + T S D + R+WDV+ S + + P
Sbjct: 598 HIYPLRIFAGHLNDVDCVSFHPNGCY-VFTGSSDKTCRMWDVSTGDSVRLFLGH--TAPV 654
Query: 299 RVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDD-ITALKFSSDG 357
+++ C DG+ ++ G DG I VW++ G G R + +GH + I +L +S +G
Sbjct: 655 -ISIAVCP---DGRWLSTGSEDGIINVWDI--GTGKR--LKQMRGHGKNAIYSLSYSKEG 706
Query: 358 RILLSRSFDGSLKVWDLRKMK-EP 380
+L+S D +++VWDL+K EP
Sbjct: 707 NVLISGGADHTVRVWDLKKATTEP 730
Score = 74 (31.1 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSW 204
L GH+ V + + +LSGS D TVR++ ++ L S++ H V ++S+
Sbjct: 521 LVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMD-THTALVSYK----GHNHPVWDVSF 575
Query: 205 SPTSDRFLCVTGSAQAKIYDRD 226
SP F + A+++ D
Sbjct: 576 SPLGHYFATASHDQTARLWSCD 597
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 158 (60.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 58/224 (25%), Positives = 108/224 (48%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
LK KGH + C +++P + I++ S D S++IW+V K+ K +K A ++
Sbjct: 116 LKTLKGHSDFVFCCDFNPPSN-LIVSGSFDESVKIWEV---KTGK-CLKTLSAHSDPISA 170
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
++C+G I G DG ++W+ G R ++G+ ++ +KFS +G+ +L+
Sbjct: 171 VN--FNCNGSLIVSGSYDGLCRIWDAASGQCLRT--LADEGNPP-VSFVKFSPNGKYILT 225
Query: 363 RSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLC 422
+ D +LK+WD + + LK + N +FS +TG + ++
Sbjct: 226 ATLDNTLKLWDYSRGR-CLKTYTGHKNEKYCLFASFS------VTGRKWVVSGSEDNMVY 278
Query: 423 FYDREKLELVSRV-GISPACSVVQCAWHPKLNQIFATA--GDKS 463
++ + E+V R+ G + V+ A HP N I + A DK+
Sbjct: 279 IWNLQTKEIVQRLQGHTDV--VISAACHPTKNIIASAALENDKT 320
Score = 155 (59.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 43/166 (25%), Positives = 79/166 (47%)
Query: 244 KNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVT 303
K GH ++ W + ++++S+D +L++WD+ K K + + V
Sbjct: 75 KTLYGHSLEISDVAWSSDSSR-LVSASDDKTLKVWDMRSGKCLKTL------KGHSDFVF 127
Query: 304 TCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR 363
C ++ I G D S+++W +K G + HSD I+A+ F+ +G +++S
Sbjct: 128 CCDFNPPSNLIVSGSFDESVKIWEVKTG----KCLKTLSAHSDPISAVNFNCNGSLIVSG 183
Query: 364 SFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
S+DG ++WD + L+ D N + V FSP+ + LT T
Sbjct: 184 SYDGLCRIWDAAS-GQCLRTLAD-EGNPPVSFVKFSPNGKYILTAT 227
Score = 62 (26.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 21/97 (21%), Positives = 45/97 (46%)
Query: 143 IVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGH--QVR 200
+ L GH+ +S++ +G + S + D + ++ N + + GH ++
Sbjct: 33 LTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLY-------GHSLEIS 85
Query: 201 NLSWSPTSDRFLCVTGSAQAKIYD-RDGLTLGEFVKG 236
+++WS S R + + K++D R G L + +KG
Sbjct: 86 DVAWSSDSSRLVSASDDKTLKVWDMRSGKCL-KTLKG 121
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 115 (45.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 46/142 (32%), Positives = 68/142 (47%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNL 202
+ GH + V +L G+ + SGS D TVR++D +N+ F GH+ V +
Sbjct: 115 MPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWD---LNTETPHFT----CTGHKQWVLCV 167
Query: 203 SWSPTSDRFL--CVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWH- 259
SW+P R C GS I+D + G+ KG R L K HI L +H
Sbjct: 168 SWAPDGKRLASGCKAGSII--IWDPE---TGQ-QKG----RPLSGHKKHINCLAWEPYHR 217
Query: 260 -PKTKETILTSSEDGSLRIWDV 280
P+ ++ + ++S DG RIWDV
Sbjct: 218 DPECRK-LASASGDGDCRIWDV 238
Score = 115 (45.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 36/150 (24%), Positives = 72/150 (48%)
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIG 319
P E++++ S+D +L +W N+ K +++ + V + D K IA
Sbjct: 342 PDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNV------VNDVKYSPDVKLIASASF 395
Query: 320 DGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKE 379
D S+++W G + +GH + + +S+D R+++S S D +LKVW ++ K
Sbjct: 396 DKSVRLWRASDG----QYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKK- 450
Query: 380 PLKVFEDLPNNYAQT-NVAFSPDEQLFLTG 408
+ ++LP + + V ++PD +G
Sbjct: 451 ---LAQELPGHADEVFGVDWAPDGSRVASG 477
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 170 (64.9 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 46/166 (27%), Positives = 82/166 (49%)
Query: 244 KNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVT 303
K GH G++ W + ++++S+D +L+IWDV+ K K + + V
Sbjct: 81 KTISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTL------KGHSNYVF 133
Query: 304 TCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR 363
C ++ I G D S+++W++K G + HSD ++A+ F+ DG +++S
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTG----KCLKTLPAHSDPVSAVHFNRDGSLIVSS 189
Query: 364 SFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
S+DG ++WD + LK D +N + V FSP+ + L T
Sbjct: 190 SYDGLCRIWDTAS-GQCLKTLID-DDNPPVSFVKFSPNGKYILAAT 233
Score = 153 (58.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 61/224 (27%), Positives = 104/224 (46%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
LK KGH + C ++P++ I++ S D S+RIWDV K K + P + P V
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTL--PAHSDP----V 174
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
+ ++ DG I DG ++W+ G + I + + ++ +KFS +G+ +L+
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD---NPPVSFVKFSPNGKYILA 231
Query: 363 RSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLC 422
+ D +LK+WD K K LK + N FS +TG + L+
Sbjct: 232 ATLDNTLKLWDYSKGK-CLKTYTGHKNEKYCIFANFS------VTGGKWIVSGSEDNLVY 284
Query: 423 FYDREKLELVSRV-GISPACSVVQCAWHPKLNQIFATA--GDKS 463
++ + E+V ++ G + V+ A HP N I + A DK+
Sbjct: 285 IWNLQTKEIVQKLQGHTDV--VISTACHPTENIIASAALENDKT 326
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 35/137 (25%), Positives = 67/137 (48%)
Query: 243 LKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
LK T GH ++ ++ P E + +SS D ++IW + K +K + KL
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLG------ 89
Query: 302 VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
++ AW D + D ++++W++ G + KGHS+ + F+ +++
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFCCNFNPQSNLIV 145
Query: 362 SRSFDGSLKVWDLRKMK 378
S SFD S+++WD++ K
Sbjct: 146 SGSFDESVRIWDVKTGK 162
Score = 68 (29.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD-FQGMNSRLQSFRQLEPSEGHQVR 200
+ L GHTK VS++ +G + S S D ++++ + G + S +L G +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL----G--IS 91
Query: 201 NLSWSPTSDRFLCVTGSAQAKIYD 224
+++WS S+ + + KI+D
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWD 115
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 170 (64.9 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 46/166 (27%), Positives = 82/166 (49%)
Query: 244 KNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVT 303
K GH G++ W + ++++S+D +L+IWDV+ K K + + V
Sbjct: 81 KTISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTL------KGHSNYVF 133
Query: 304 TCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR 363
C ++ I G D S+++W++K G + HSD ++A+ F+ DG +++S
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTG----KCLKTLPAHSDPVSAVHFNRDGSLIVSS 189
Query: 364 SFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
S+DG ++WD + LK D +N + V FSP+ + L T
Sbjct: 190 SYDGLCRIWDTAS-GQCLKTLID-DDNPPVSFVKFSPNGKYILAAT 233
Score = 153 (58.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 61/224 (27%), Positives = 104/224 (46%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
LK KGH + C ++P++ I++ S D S+RIWDV K K + P + P V
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTL--PAHSDP----V 174
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
+ ++ DG I DG ++W+ G + I + + ++ +KFS +G+ +L+
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD---NPPVSFVKFSPNGKYILA 231
Query: 363 RSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLC 422
+ D +LK+WD K K LK + N FS +TG + L+
Sbjct: 232 ATLDNTLKLWDYSKGK-CLKTYTGHKNEKYCIFANFS------VTGGKWIVSGSEDNLVY 284
Query: 423 FYDREKLELVSRV-GISPACSVVQCAWHPKLNQIFATA--GDKS 463
++ + E+V ++ G + V+ A HP N I + A DK+
Sbjct: 285 IWNLQTKEIVQKLQGHTDV--VISTACHPTENIIASAALENDKT 326
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 35/137 (25%), Positives = 67/137 (48%)
Query: 243 LKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
LK T GH ++ ++ P E + +SS D ++IW + K +K + KL
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLG------ 89
Query: 302 VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
++ AW D + D ++++W++ G + KGHS+ + F+ +++
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFCCNFNPQSNLIV 145
Query: 362 SRSFDGSLKVWDLRKMK 378
S SFD S+++WD++ K
Sbjct: 146 SGSFDESVRIWDVKTGK 162
Score = 68 (29.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD-FQGMNSRLQSFRQLEPSEGHQVR 200
+ L GHTK VS++ +G + S S D ++++ + G + S +L G +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL----G--IS 91
Query: 201 NLSWSPTSDRFLCVTGSAQAKIYD 224
+++WS S+ + + KI+D
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWD 115
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 170 (64.9 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 46/166 (27%), Positives = 82/166 (49%)
Query: 244 KNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVT 303
K GH G++ W + ++++S+D +L+IWDV+ K K + + V
Sbjct: 81 KTISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTL------KGHSNYVF 133
Query: 304 TCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR 363
C ++ I G D S+++W++K G + HSD ++A+ F+ DG +++S
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTG----KCLKTLPAHSDPVSAVHFNRDGSLIVSS 189
Query: 364 SFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
S+DG ++WD + LK D +N + V FSP+ + L T
Sbjct: 190 SYDGLCRIWDTAS-GQCLKTLID-DDNPPVSFVKFSPNGKYILAAT 233
Score = 153 (58.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 61/224 (27%), Positives = 104/224 (46%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
LK KGH + C ++P++ I++ S D S+RIWDV K K + P + P V
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTL--PAHSDP----V 174
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
+ ++ DG I DG ++W+ G + I + + ++ +KFS +G+ +L+
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD---NPPVSFVKFSPNGKYILA 231
Query: 363 RSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLC 422
+ D +LK+WD K K LK + N FS +TG + L+
Sbjct: 232 ATLDNTLKLWDYSKGK-CLKTYTGHKNEKYCIFANFS------VTGGKWIVSGSEDNLVY 284
Query: 423 FYDREKLELVSRV-GISPACSVVQCAWHPKLNQIFATA--GDKS 463
++ + E+V ++ G + V+ A HP N I + A DK+
Sbjct: 285 IWNLQTKEIVQKLQGHTDV--VISTACHPTENIIASAALENDKT 326
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 35/137 (25%), Positives = 67/137 (48%)
Query: 243 LKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
LK T GH ++ ++ P E + +SS D ++IW + K +K + KL
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLG------ 89
Query: 302 VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
++ AW D + D ++++W++ G + KGHS+ + F+ +++
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFCCNFNPQSNLIV 145
Query: 362 SRSFDGSLKVWDLRKMK 378
S SFD S+++WD++ K
Sbjct: 146 SGSFDESVRIWDVKTGK 162
Score = 68 (29.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD-FQGMNSRLQSFRQLEPSEGHQVR 200
+ L GHTK VS++ +G + S S D ++++ + G + S +L G +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL----G--IS 91
Query: 201 NLSWSPTSDRFLCVTGSAQAKIYD 224
+++WS S+ + + KI+D
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWD 115
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 170 (64.9 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 46/166 (27%), Positives = 82/166 (49%)
Query: 244 KNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVT 303
K GH G++ W + ++++S+D +L+IWDV+ K K + + V
Sbjct: 81 KTISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTL------KGHSNYVF 133
Query: 304 TCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR 363
C ++ I G D S+++W++K G + HSD ++A+ F+ DG +++S
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTG----KCLKTLPAHSDPVSAVHFNRDGSLIVSS 189
Query: 364 SFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
S+DG ++WD + LK D +N + V FSP+ + L T
Sbjct: 190 SYDGLCRIWDTAS-GQCLKTLID-DDNPPVSFVKFSPNGKYILAAT 233
Score = 153 (58.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 61/224 (27%), Positives = 104/224 (46%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
LK KGH + C ++P++ I++ S D S+RIWDV K K + P + P V
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTL--PAHSDP----V 174
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
+ ++ DG I DG ++W+ G + I + + ++ +KFS +G+ +L+
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD---NPPVSFVKFSPNGKYILA 231
Query: 363 RSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLC 422
+ D +LK+WD K K LK + N FS +TG + L+
Sbjct: 232 ATLDNTLKLWDYSKGK-CLKTYTGHKNEKYCIFANFS------VTGGKWIVSGSEDNLVY 284
Query: 423 FYDREKLELVSRV-GISPACSVVQCAWHPKLNQIFATA--GDKS 463
++ + E+V ++ G + V+ A HP N I + A DK+
Sbjct: 285 IWNLQTKEIVQKLQGHTDV--VISTACHPTENIIASAALENDKT 326
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 35/137 (25%), Positives = 67/137 (48%)
Query: 243 LKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
LK T GH ++ ++ P E + +SS D ++IW + K +K + KL
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLG------ 89
Query: 302 VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
++ AW D + D ++++W++ G + KGHS+ + F+ +++
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFCCNFNPQSNLIV 145
Query: 362 SRSFDGSLKVWDLRKMK 378
S SFD S+++WD++ K
Sbjct: 146 SGSFDESVRIWDVKTGK 162
Score = 68 (29.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD-FQGMNSRLQSFRQLEPSEGHQVR 200
+ L GHTK VS++ +G + S S D ++++ + G + S +L G +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL----G--IS 91
Query: 201 NLSWSPTSDRFLCVTGSAQAKIYD 224
+++WS S+ + + KI+D
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWD 115
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 170 (64.9 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 46/166 (27%), Positives = 82/166 (49%)
Query: 244 KNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVT 303
K GH G++ W + ++++S+D +L+IWDV+ K K + + V
Sbjct: 81 KTISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTL------KGHSNYVF 133
Query: 304 TCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR 363
C ++ I G D S+++W++K G + HSD ++A+ F+ DG +++S
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTG----KCLKTLPAHSDPVSAVHFNRDGSLIVSS 189
Query: 364 SFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
S+DG ++WD + LK D +N + V FSP+ + L T
Sbjct: 190 SYDGLCRIWDTAS-GQCLKTLID-DDNPPVSFVKFSPNGKYILAAT 233
Score = 153 (58.9 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 61/224 (27%), Positives = 104/224 (46%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
LK KGH + C ++P++ I++ S D S+RIWDV K K + P + P V
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTL--PAHSDP----V 174
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
+ ++ DG I DG ++W+ G + I + + ++ +KFS +G+ +L+
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD---NPPVSFVKFSPNGKYILA 231
Query: 363 RSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLC 422
+ D +LK+WD K K LK + N FS +TG + L+
Sbjct: 232 ATLDNTLKLWDYSKGK-CLKTYTGHKNEKYCIFANFS------VTGGKWIVSGSEDNLVY 284
Query: 423 FYDREKLELVSRV-GISPACSVVQCAWHPKLNQIFATA--GDKS 463
++ + E+V ++ G + V+ A HP N I + A DK+
Sbjct: 285 IWNLQTKEIVQKLQGHTDV--VISTACHPTENIIASAALENDKT 326
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 35/137 (25%), Positives = 67/137 (48%)
Query: 243 LKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
LK T GH ++ ++ P E + +SS D ++IW + K +K + KL
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLG------ 89
Query: 302 VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
++ AW D + D ++++W++ G + KGHS+ + F+ +++
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFCCNFNPQSNLIV 145
Query: 362 SRSFDGSLKVWDLRKMK 378
S SFD S+++WD++ K
Sbjct: 146 SGSFDESVRIWDVKTGK 162
Score = 68 (29.0 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD-FQGMNSRLQSFRQLEPSEGHQVR 200
+ L GHTK VS++ +G + S S D ++++ + G + S +L G +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL----G--IS 91
Query: 201 NLSWSPTSDRFLCVTGSAQAKIYD 224
+++WS S+ + + KI+D
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWD 115
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 166 (63.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 46/139 (33%), Positives = 73/139 (52%)
Query: 239 YIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPG 298
+I L+ GHI + C E+HP + + T S D + R+WDV+ ++ L
Sbjct: 590 HIYPLRIFAGHINDVDCVEFHPNSNY-VFTGSSDKTCRMWDVHT----GNCVRVFLGHTN 644
Query: 299 RVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSD-DITALKFSSDG 357
+V A DG+ +A G DG I VW++ G G R + +GH+ + +L FS DG
Sbjct: 645 --SVNCLAVSPDGRWLASGGEDGIICVWDI--GSGRR--LKSMRGHARASLYSLAFSRDG 698
Query: 358 RILLSRSFDGSLKVWDLRK 376
+L+S D S++VWD++K
Sbjct: 699 TVLVSGCADNSVRVWDVKK 717
Score = 67 (28.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 25/96 (26%), Positives = 44/96 (45%)
Query: 133 NRHQIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLE 192
+RH+ P N L GH+ V ++ +LS S D TVR++ L ++ L
Sbjct: 502 DRHK-PQENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWS-------LDTYTALV 553
Query: 193 PSEGHQ--VRNLSWSPTSDRFLCVTGSAQAKIYDRD 226
+GH V ++ +SP F+ + A+++ D
Sbjct: 554 SYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATD 589
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 133 (51.9 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 263 KETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGS 322
+E + + S+DG++ IWD + K I+ VA++ + + +GGI D
Sbjct: 158 EEILFSGSDDGTIGIWDPRK-KHAADYIESDFPVTA-VAIS----EAGNEIYSGGI-DND 210
Query: 323 IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKM---KE 379
I+VW+++ + ++ GH D IT LK S D + LLS + D + + WD+R +
Sbjct: 211 IKVWDVR----KKAVVYNMAGHRDTITTLKVSPDSQSLLSYAMDSTARTWDIRPFAPTER 266
Query: 380 PLKVFEDLP 388
++ F+ P
Sbjct: 267 HIRTFDGAP 275
Score = 116 (45.9 bits), Expect = 0.00095, P = 0.00095
Identities = 35/134 (26%), Positives = 66/134 (49%)
Query: 245 NTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA--V 302
N GH +T + P + +++L+ + D + R WD+ F ++ I+ P + +
Sbjct: 224 NMAGHRDTITTLKVSPDS-QSLLSYAMDSTARTWDIRPFAPTERHIRTFDGAPMGIEKNL 282
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGR-ILL 361
WD +GK +A G DG++ +W+ + G + + GH + ++FS ++L
Sbjct: 283 VRGGWDKEGKRVAMGAADGTVVIWSNETGKLT----YKLPGHKAAVNCVEFSPGTEPLIL 338
Query: 362 SRSFDGSLKVWDLR 375
S S D +L V +LR
Sbjct: 339 SGSSDKTLLVGELR 352
Score = 89 (36.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 33/135 (24%), Positives = 62/135 (45%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSW 204
L GH+ + + +G + SGS D ++ ++ N +++ L G + +L W
Sbjct: 56 LSGHSGEIFCAKFNSAGQYIASGSMDRSILLWR---ANGDCENYGILSGHRG-AILDLQW 111
Query: 205 SPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKE 264
S SD + + SA + D LT GE ++ Y+ GH + + + +E
Sbjct: 112 SRDSD--IIFSASADMHLASWD-LTTGERIR--RYV-------GHEEVINSLDISKRGEE 159
Query: 265 TILTSSEDGSLRIWD 279
+ + S+DG++ IWD
Sbjct: 160 ILFSGSDDGTIGIWD 174
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 170 (64.9 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 46/166 (27%), Positives = 82/166 (49%)
Query: 244 KNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVT 303
K GH G++ W + ++++S+D +L+IWDV+ K K + + V
Sbjct: 81 KTISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKCLKTL------KGHSNYVF 133
Query: 304 TCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR 363
C ++ I G D S+++W++K G + HSD ++A+ F+ DG +++S
Sbjct: 134 CCNFNPQSNLIVSGSFDESVRIWDVKTG----KCLKTLPAHSDPVSAVHFNRDGSLIVSS 189
Query: 364 SFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
S+DG ++WD + LK D +N + V FSP+ + L T
Sbjct: 190 SYDGLCRIWDTAS-GQCLKTLID-DDNPPVSFVKFSPNGKYILAAT 233
Score = 150 (57.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 61/224 (27%), Positives = 104/224 (46%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
LK KGH + C ++P++ I++ S D S+RIWDV K K + P + P V
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTL--PAHSDP----V 174
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
+ ++ DG I DG ++W+ G + I + + ++ +KFS +G+ +L+
Sbjct: 175 SAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD---NPPVSFVKFSPNGKYILA 231
Query: 363 RSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLC 422
+ D +LK+WD K K LK + N FS +TG + L+
Sbjct: 232 ATLDNTLKLWDYSKGK-CLKTYTCHKNEKYCIFANFS------VTGGKWIVSGSEDNLVY 284
Query: 423 FYDREKLELVSRV-GISPACSVVQCAWHPKLNQIFATA--GDKS 463
++ + E+V ++ G + V+ A HP N I + A DK+
Sbjct: 285 IWNLQTKEVVQKLQGHTDV--VISTACHPTENIIASAALENDKT 326
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 35/137 (25%), Positives = 67/137 (48%)
Query: 243 LKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
LK T GH ++ ++ P E + +SS D ++IW + K +K + KL
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKLG------ 89
Query: 302 VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
++ AW D + D ++++W++ G + KGHS+ + F+ +++
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSG----KCLKTLKGHSNYVFCCNFNPQSNLIV 145
Query: 362 SRSFDGSLKVWDLRKMK 378
S SFD S+++WD++ K
Sbjct: 146 SGSFDESVRIWDVKTGK 162
Score = 68 (29.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 21/84 (25%), Positives = 41/84 (48%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD-FQGMNSRLQSFRQLEPSEGHQVR 200
+ L GHTK VS++ +G + S S D ++++ + G + S +L G +
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKL----G--IS 91
Query: 201 NLSWSPTSDRFLCVTGSAQAKIYD 224
+++WS S+ + + KI+D
Sbjct: 92 DVAWSSDSNLLVSASDDKTLKIWD 115
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 177 (67.4 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 74/280 (26%), Positives = 128/280 (45%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD--FQGMNSRLQSFRQLEPSEGHQVRN- 201
L+GH+ + + G + SGS D T++++D G+ L+ S
Sbjct: 37 LEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQ 96
Query: 202 LSWSPTSDRFLCVTGSAQAKI-YDRDGLT-LGEFV----KGDMY---IRDLKNT-KGHIC 251
L S +SD + + SA + + +G + E V G ++ I LK+T +GH
Sbjct: 97 LLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHSD 156
Query: 252 GLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDG 311
+ + P + + + S + ++++WD S +K L V + DG
Sbjct: 157 WVLSVAFSPDG-QLLASGSAEKTIKLWD-----SATCGLKHTLGGHSNW-VLPLVFSPDG 209
Query: 312 KCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKV 371
+ +A G D +I++W+ P GS H +GHS+ I +L FS +G++L S S D ++K+
Sbjct: 210 RLLASGSNDATIKLWD--PPSGSLK--HTLEGHSNKIESLAFSPNGQLLASGSSDATIKL 265
Query: 372 WDLR--KMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
WD + LK D+ +V FSPD QL +G+
Sbjct: 266 WDTATGSFRHTLKGHSDMV-----LSVVFSPDSQLLESGS 300
Score = 169 (64.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 63/246 (25%), Positives = 111/246 (45%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSW 204
L+GH+ V ++A +G + SGS D T++++ NS S + +V ++++
Sbjct: 79 LEGHSSSVQSVAFSPNGQLLASGSSDTTIKLW-----NSASDSLKHTMEGHSDRVESVAF 133
Query: 205 SPTSDRFLCVTGSAQAKIYDRDGLTL-------GEFVKGDMYIRDLKNTKGHICGL--TC 255
SP + GS + I L G+ + + +K CGL T
Sbjct: 134 SPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTL 193
Query: 256 G---EWH-P---KTKETILTS-SEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
G W P +L S S D ++++WD S K ++ + + + A+
Sbjct: 194 GGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPS-GSLKHTLEGHSNK-----IESLAF 247
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDG 367
+G+ +A G D +I++W+ G R H KGHSD + ++ FS D ++L S S D
Sbjct: 248 SPNGQLLASGSSDATIKLWDTATG-SFR---HTLKGHSDMVLSVVFSPDSQLLESGSGDN 303
Query: 368 SLKVWD 373
++K+WD
Sbjct: 304 TIKLWD 309
Score = 131 (51.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 37/109 (33%), Positives = 61/109 (55%)
Query: 302 VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
V + A+ DG+ +A G + +I++W+ G + H GHS+ + L FS DGR+L
Sbjct: 158 VLSVAFSPDGQLLASGSAEKTIKLWD-SATCGLK---HTLGGHSNWVLPLVFSPDGRLLA 213
Query: 362 SRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTS 410
S S D ++K+WD LK + +N ++ +AFSP+ QL +G+S
Sbjct: 214 SGSNDATIKLWD--PPSGSLKHTLEGHSNKIES-LAFSPNGQLLASGSS 259
Score = 127 (49.8 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 42/157 (26%), Positives = 75/157 (47%)
Query: 322 SIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRK--MKE 379
++Q ++ WG P++ +GHSD I + FS DGR+L S S D ++K+WD +K+
Sbjct: 20 TLQRPKVEDNWG--PELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQ 77
Query: 380 PLKVFEDLPNNYAQTNVAFSPDEQLFLTG---TSVERESTTGGLLCFYDREKLELVSRVG 436
L+ ++ + +VAFSP+ QL +G T+++ ++ L + V V
Sbjct: 78 TLE-----GHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVA 132
Query: 437 ISPACSVVQCAWHPKLNQIFATAGDKSQGGTHILYDP 473
SP + W+P + + T S + + P
Sbjct: 133 FSPNGQL----WNPAIGSLKHTIEGHSDWVLSVAFSP 165
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 184 (69.8 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 84/317 (26%), Positives = 151/317 (47%)
Query: 138 PMSNEIV--LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD---------FQGMNSRLQ 186
P + E++ L+GH++ V ++A G ++ S S D T+++++ F+G + ++
Sbjct: 947 PATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIR 1006
Query: 187 SFRQLEPSEGHQVRNLS------WS-PTSDRFLCV---TGSAQAKIYDRD-----GLTLG 231
+ P H V W TS+ + + S A + D +L
Sbjct: 1007 AVA-FSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLD 1065
Query: 232 EFVK-GDMYIRDLKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQV 289
+K D +L+ T +GH G+ + P K + ++S DG++++W N + Q
Sbjct: 1066 STIKLWDSATGELQRTLEGHSQGVRSVTFSPDGK-LLASNSYDGTIKLW--NPLTGELQQ 1122
Query: 290 IKPKLARPGRVA-VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDI 348
GR V + A+ DGK +A G D +I++W+ G + +GHSD I
Sbjct: 1123 -----TLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATG----ELLQTLEGHSDRI 1173
Query: 349 TALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLT- 407
++ FS DG++L S S+D + K+WD E L++FE + + ++ VAFSPD +L +
Sbjct: 1174 QSVVFSPDGKLLASGSYDQTAKLWD-PATGELLQIFEG-HSKWVES-VAFSPDGKLLASS 1230
Query: 408 --GTSVER-ESTTGGLL 421
G +++ + TG LL
Sbjct: 1231 SYGETIKLWDPVTGELL 1247
Score = 166 (63.5 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 77/309 (24%), Positives = 147/309 (47%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD------FQGMNSRLQSFRQLEPS-EGH 197
L H++ V ++A G + S S D T+++++ Q + R + + S +G
Sbjct: 872 LDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGK 931
Query: 198 QVRNLS-------WSPTSDRFL-CVTGSAQAK---IYDRDGLTLGEFVKGDMYIR----- 241
++ + S W+P + L + G +Q+ + DG L D I+
Sbjct: 932 KLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASS-SSDTTIKLWNST 990
Query: 242 --DLKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPG 298
+L+ T KGH + + P K +++ S+D ++++WD+ + Q+ L
Sbjct: 991 TGELQQTFKGHDLWIRAVAFSPDGKH-LVSGSDDNTIKLWDLATSELQQS-----LEDHS 1044
Query: 299 RVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGR 358
R +V A+ D K +A D +I++W+ G R +E GHS + ++ FS DG+
Sbjct: 1045 R-SVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRT---LE-GHSQGVRSVTFSPDGK 1099
Query: 359 ILLSRSFDGSLKVWD--LRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTG---TSVER 413
+L S S+DG++K+W+ ++++ L D ++ VAFSPD + +G ++++
Sbjct: 1100 LLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDS-----VAFSPDGKQLASGYYDSTIKL 1154
Query: 414 -ESTTGGLL 421
+S TG LL
Sbjct: 1155 WDSATGELL 1163
Score = 155 (59.6 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 62/250 (24%), Positives = 112/250 (44%)
Query: 237 DMYIRDLKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLA 295
D+ +L+ + + H + + P K+ + +SS D ++++WD + Q+ + +
Sbjct: 1030 DLATSELQQSLEDHSRSVHAVAFSPDDKQ-LASSSLDSTIKLWDSATGELQRTL---EGH 1085
Query: 296 RPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSS 355
G +VT + DGK +A DG+I++WN P G G SD + ++ FS
Sbjct: 1086 SQGVRSVT---FSPDGKLLASNSYDGTIKLWN--PLTGELQQTLT--GRSDWVDSVAFSP 1138
Query: 356 DGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTG----TSV 411
DG+ L S +D ++K+WD E L+ E + +V FSPD +L +G T+
Sbjct: 1139 DGKQLASGYYDSTIKLWD-SATGELLQTLEGHSDRIQ--SVVFSPDGKLLASGSYDQTAK 1195
Query: 412 ERESTTGGLLCFYDREKLELVSRVGISPACSVVQCA--------WHPKLNQIFATAGDKS 463
+ TG LL ++ + V V SP ++ + W P ++ T D
Sbjct: 1196 LWDPATGELLQIFEGHS-KWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPD 1254
Query: 464 QGGTHILYDP 473
+ + + P
Sbjct: 1255 ESAGSVAFSP 1264
Score = 141 (54.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 86/314 (27%), Positives = 134/314 (42%)
Query: 138 PMSNEIV--LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSE 195
P + E++ L GH+ V +LA G + SGSYD T+ ++D LQ+F P
Sbjct: 779 PATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWD-SATGELLQTFEG-HP-- 834
Query: 196 GHQVRNLSWSPTSDRFLCVTGSAQAKIYD-RDG---LTL---GEFVKGDMYIRDLKNTKG 248
H + +++++P + + KI+D G TL + V+ + D K
Sbjct: 835 -HSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLAS 893
Query: 249 HICGLTCGEWHPKTKETILTSSEDGSLRIW--------DVNEFKSQKQVIKPKLARP--G 298
T W+P T E L S +G W D + S + KL P G
Sbjct: 894 SSLDSTIKVWNPATGE--LQQSLEGRSG-WVKSVAFSPDGKKLASGSEKNTVKLWNPATG 950
Query: 299 RVAVTTCAWDCDGKCIAGGIGDG-----SIQVWNLKPGWGSRP-DIHVE-KGHSDDITAL 351
+ T + +A DG S +K W S ++ KGH I A+
Sbjct: 951 ELLQTLEGHSQSVRSVAFS-PDGKQLASSSSDTTIKL-WNSTTGELQQTFKGHDLWIRAV 1008
Query: 352 KFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSV 411
FS DG+ L+S S D ++K+WDL E + ED ++ + VAFSPD++ L +S+
Sbjct: 1009 AFSPDGKHLVSGSDDNTIKLWDLAT-SELQQSLED--HSRSVHAVAFSPDDKQ-LASSSL 1064
Query: 412 ER-----ESTTGGL 420
+ +S TG L
Sbjct: 1065 DSTIKLWDSATGEL 1078
Score = 140 (54.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 44/153 (28%), Positives = 81/153 (52%)
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIG 319
P K+ +++ S D +++IWD + ++++ G V + A+ DGK +A G
Sbjct: 760 PDGKQ-LVSGSYDDTVKIWD----PATGELLQTLDGHSG--TVESLAFSPDGKLLASGSY 812
Query: 320 DGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKE 379
D +I +W+ G + +GH I ++ F+ DG+ L S S D ++K+WDL +
Sbjct: 813 DNTIDLWDSATG----ELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGE- 867
Query: 380 PLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVE 412
L+ D ++ + +VAFSPD +L L +S++
Sbjct: 868 -LQQTLD-SHSQSVRSVAFSPDGKL-LASSSLD 897
Score = 137 (53.3 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 33/100 (33%), Positives = 55/100 (55%)
Query: 302 VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
V + + DGK + G D ++++W+ P G + GHS + +L FS DG++L
Sbjct: 753 VESVVFSPDGKQLVSGSYDDTVKIWD--PATGEL--LQTLDGHSGTVESLAFSPDGKLLA 808
Query: 362 SRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPD 401
S S+D ++ +WD E L+ FE P++ +VAF+PD
Sbjct: 809 SGSYDNTIDLWD-SATGELLQTFEGHPHSI--WSVAFAPD 845
Score = 75 (31.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 29/93 (31%), Positives = 46/93 (49%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNL 202
L+ H V ++ G +++SGSYD TV+++D LQ+ +GH V +L
Sbjct: 746 LENHLGPVESVVFSPDGKQLVSGSYDDTVKIWD-PATGELLQTL------DGHSGTVESL 798
Query: 203 SWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVK 235
++SP D L +GS I D T GE ++
Sbjct: 799 AFSP--DGKLLASGSYDNTIDLWDSAT-GELLQ 828
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 177 (67.4 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 237 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLAR 296
D Y + L+ GH+ + C +HP + + T S D ++R+WDV ++
Sbjct: 616 DHY-QPLRIFAGHLADVNCTRYHPNSNY-VATGSADRTVRLWDV----LNGNCVRIFTGH 669
Query: 297 PGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSD 356
G + T + +G+ +A G DG + +W++ G G + KGH+D + +L+FS D
Sbjct: 670 KGPIHSLT--FSPNGRFLATGATDGRVLLWDI--GHGLM--VGELKGHTDTVCSLRFSRD 723
Query: 357 GRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERES 415
G IL S S D ++++WD K E L+ +D A ++ + Q L GT + + +
Sbjct: 724 GEILASGSMDNTVRLWDAVKAFEDLET-DDFTT--ATGHINLPENSQELLLGTYMTKST 779
Score = 98 (39.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 36/171 (21%), Positives = 71/171 (41%)
Query: 267 LTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA-WDCDGKCIAGGIGDGSIQV 325
++ D R+W + ++ P G +A C + + +A G D ++++
Sbjct: 602 VSGGHDRVARLWATDHYQ-------PLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRL 654
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFE 385
W++ G + + GH I +L FS +GR L + + DG + +WD+ L V E
Sbjct: 655 WDVLNG----NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG---HGLMVGE 707
Query: 386 DLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVG 436
+ ++ FS D ++ +G+ + F D E + + G
Sbjct: 708 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATG 758
Score = 86 (35.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 21/80 (26%), Positives = 38/80 (47%)
Query: 204 WSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
WS T + V ++ + D++ + E + + +LK GH G G +
Sbjct: 498 WSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGH-SGPVYGASFSPDR 556
Query: 264 ETILTSSEDGSLRIWDVNEF 283
+L+SSEDG++R+W + F
Sbjct: 557 NYLLSSSEDGTVRLWSLQTF 576
Score = 52 (23.4 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 27/108 (25%), Positives = 46/108 (42%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
+L GH+ V + + +LS S D TVR++ LQ+F L +GH V +
Sbjct: 539 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS-------LQTFTCLVGYKGHNYPVWD 591
Query: 202 LSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGH 249
+SP F+ A+++ D G ++ D+ T+ H
Sbjct: 592 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAG--HLADVNCTRYH 637
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 176 (67.0 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 237 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLAR 296
D Y + L+ GH+ + C +HP + + T S D ++R+WDV ++
Sbjct: 613 DHY-QPLRIFAGHLADVNCTRFHPNSNY-VATGSADRTVRLWDV----LNGNCVRIFTGH 666
Query: 297 PGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSD 356
G + T + +G+ +A G DG + +W++ G G + KGH+D + +L+FS D
Sbjct: 667 KGPIHSLT--FSPNGRFLATGATDGRVLLWDI--GHGLM--VGELKGHTDTVCSLRFSRD 720
Query: 357 GRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERES 415
G IL S S D ++++WD K E L+ +D A ++ + Q L GT + + +
Sbjct: 721 GEILASGSMDNTVRLWDAIKAFEDLET-DDFTT--ATGHINLPENSQELLLGTYMTKST 776
Score = 98 (39.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 36/171 (21%), Positives = 71/171 (41%)
Query: 267 LTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA-WDCDGKCIAGGIGDGSIQV 325
++ D R+W + ++ P G +A C + + +A G D ++++
Sbjct: 599 VSGGHDRVARLWATDHYQ-------PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 651
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFE 385
W++ G + + GH I +L FS +GR L + + DG + +WD+ L V E
Sbjct: 652 WDVLNG----NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG---HGLMVGE 704
Query: 386 DLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVG 436
+ ++ FS D ++ +G+ + F D E + + G
Sbjct: 705 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATG 755
Score = 86 (35.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 21/80 (26%), Positives = 38/80 (47%)
Query: 204 WSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
WS T + V ++ + D++ + E + + +LK GH G G +
Sbjct: 495 WSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGH-SGPVYGASFSPDR 553
Query: 264 ETILTSSEDGSLRIWDVNEF 283
+L+SSEDG++R+W + F
Sbjct: 554 NYLLSSSEDGTVRLWSLQTF 573
Score = 52 (23.4 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 27/108 (25%), Positives = 46/108 (42%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
+L GH+ V + + +LS S D TVR++ LQ+F L +GH V +
Sbjct: 536 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS-------LQTFTCLVGYKGHNYPVWD 588
Query: 202 LSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGH 249
+SP F+ A+++ D G ++ D+ T+ H
Sbjct: 589 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAG--HLADVNCTRFH 634
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 176 (67.0 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 237 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLAR 296
D Y + L+ GH+ + C +HP + + T S D ++R+WDV ++
Sbjct: 615 DHY-QPLRIFAGHLADVNCTRFHPNSNY-VATGSADRTVRLWDV----LNGNCVRIFTGH 668
Query: 297 PGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSD 356
G + T + +G+ +A G DG + +W++ G G + KGH+D + +L+FS D
Sbjct: 669 KGPIHSLT--FSPNGRFLATGATDGRVLLWDI--GHGLM--VGELKGHTDTVCSLRFSRD 722
Query: 357 GRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERES 415
G IL S S D ++++WD K E L+ +D A ++ + Q L GT + + +
Sbjct: 723 GEILASGSMDNTVRLWDAIKAFEDLET-DDFTT--ATGHINLPENSQELLLGTYMTKST 778
Score = 98 (39.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 36/171 (21%), Positives = 71/171 (41%)
Query: 267 LTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA-WDCDGKCIAGGIGDGSIQV 325
++ D R+W + ++ P G +A C + + +A G D ++++
Sbjct: 601 VSGGHDRVARLWATDHYQ-------PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 653
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFE 385
W++ G + + GH I +L FS +GR L + + DG + +WD+ L V E
Sbjct: 654 WDVLNG----NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG---HGLMVGE 706
Query: 386 DLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVG 436
+ ++ FS D ++ +G+ + F D E + + G
Sbjct: 707 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATG 757
Score = 86 (35.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 21/80 (26%), Positives = 38/80 (47%)
Query: 204 WSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
WS T + V ++ + D++ + E + + +LK GH G G +
Sbjct: 497 WSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGH-SGPVYGASFSPDR 555
Query: 264 ETILTSSEDGSLRIWDVNEF 283
+L+SSEDG++R+W + F
Sbjct: 556 NYLLSSSEDGTVRLWSLQTF 575
Score = 52 (23.4 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 27/108 (25%), Positives = 46/108 (42%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
+L GH+ V + + +LS S D TVR++ LQ+F L +GH V +
Sbjct: 538 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS-------LQTFTCLVGYKGHNYPVWD 590
Query: 202 LSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGH 249
+SP F+ A+++ D G ++ D+ T+ H
Sbjct: 591 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAG--HLADVNCTRFH 636
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 176 (67.0 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 50/179 (27%), Positives = 88/179 (49%)
Query: 237 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLAR 296
D Y + L+ GH+ + C +HP + + T S D ++R+WDV ++
Sbjct: 616 DHY-QPLRIFAGHLADVNCTRFHPNSNY-VATGSADRTVRLWDV----LNGNCVRIFTGH 669
Query: 297 PGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSD 356
G + T + +G+ +A G DG + +W++ G G + KGH+D + +L+FS D
Sbjct: 670 KGPIHSLT--FSPNGRFLATGATDGRVLLWDI--GHGLM--VGELKGHTDTVCSLRFSRD 723
Query: 357 GRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERES 415
G IL S S D ++++WD K E L+ +D A ++ + Q L GT + + +
Sbjct: 724 GEILASGSMDNTVRLWDAVKAFEDLET-DDFTT--ATGHINLPENSQELLLGTYMTKST 779
Score = 97 (39.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 36/171 (21%), Positives = 71/171 (41%)
Query: 267 LTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA-WDCDGKCIAGGIGDGSIQV 325
++ D R+W + ++ P G +A C + + +A G D ++++
Sbjct: 602 VSGGHDRVARLWATDHYQ-------PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 654
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFE 385
W++ G + + GH I +L FS +GR L + + DG + +WD+ L V E
Sbjct: 655 WDVLNG----NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG---HGLMVGE 707
Query: 386 DLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVG 436
+ ++ FS D ++ +G+ + F D E + + G
Sbjct: 708 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDLETDDFTTATG 758
Score = 89 (36.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 204 WSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
WS T + V +A + D++ + E + + +LK GH G G +
Sbjct: 498 WSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGH-SGPVYGASFSPDR 556
Query: 264 ETILTSSEDGSLRIWDVNEF 283
+L+SSEDG++R+W + F
Sbjct: 557 NYLLSSSEDGTVRLWSLQTF 576
Score = 52 (23.4 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 27/108 (25%), Positives = 46/108 (42%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
+L GH+ V + + +LS S D TVR++ LQ+F L +GH V +
Sbjct: 539 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS-------LQTFTCLVGYKGHNYPVWD 591
Query: 202 LSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGH 249
+SP F+ A+++ D G ++ D+ T+ H
Sbjct: 592 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAG--HLADVNCTRFH 637
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 152 (58.6 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 49/177 (27%), Positives = 87/177 (49%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
++N K H + + + + + I ++S+DG++ + D+ K+ K + + + AV
Sbjct: 114 IRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRS----KEAAKKFICKYQQTAV 169
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDI-HVEKGHSDDITALKFSSDGRILL 361
T D I GGI D I+VW++ R D+ +V GH D IT+L S +G LL
Sbjct: 170 TFN--DAADNVICGGI-DNQIKVWDML-----RNDVRYVLSGHRDTITSLSVSHNGNFLL 221
Query: 362 SRSFDGSLKVWDLRKMKEPLKV---FEDLPNNYAQT--NVAFSPDEQLFLTGTSVER 413
S S D SL WD+R ++ ++ +N+ + +SP + ++T S +R
Sbjct: 222 SNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGWSPRDN-YITAGSADR 277
Score = 64 (27.6 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 141 NEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFR 189
N VLKGH + + + S ++S D TVR++D + S +++F+
Sbjct: 71 NFAVLKGHKGAIMEVKFNADSSHLVSAGTDKTVRVWDME-TGSCIRNFK 118
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 175 (66.7 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 42/159 (26%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+P +L++S+D ++ +WD+N + +VI K G AV AW + + G
Sbjct: 189 WNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFG 248
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 249 SVADDQKLMIWDTRNNNTSKPS-HTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 307
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 308 RNLKLKLHSFESHKDEIFQ--VQWSPHNETILASSGTDR 344
Score = 122 (48.0 bits), Expect = 0.00029, P = 0.00029
Identities = 55/216 (25%), Positives = 91/216 (42%)
Query: 173 VRMYDFQGMNSRLQSFRQLEPS---EGHQVRN--LSWSPTSDRFLCVTGSAQAKIYDRDG 227
V ++D+ S+ + + +P GHQ LSW+P + +L ++ S I D
Sbjct: 153 VLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYL-LSASDDHTICLWD- 210
Query: 228 LTLGEFVKGDMYIRDLKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQ 286
+ K I D KN GH + WH + + ++D L IWD +
Sbjct: 211 --INATPKEHRVI-DAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS 267
Query: 287 KQVIKPKLARPGRVAVTTC-AWDCDGKCI-AGGIGDGSIQVWNLKPGWGSRPDIHVEKGH 344
K P A C +++ + I A G D ++ +W+L+ + +H + H
Sbjct: 268 K----PSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR---NLKLKLHSFESH 320
Query: 345 SDDITALKFSSDGR-ILLSRSFDGSLKVWDLRKMKE 379
D+I +++S IL S D L VWDL K+ E
Sbjct: 321 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 356
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 152 (58.6 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 44/150 (29%), Positives = 77/150 (51%)
Query: 241 RDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV 300
R K KGH + C ++P++ +++ S D S+RIWDV K + P + P
Sbjct: 162 RMTKTLKGHNNYVFCCNFNPQSS-LVVSGSFDESVRIWDVKTGMCIKTL--PAHSDP--- 215
Query: 301 AVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL 360
V+ +++ DG IA G DG +++W+ G + + E + + +KFS +G+ +
Sbjct: 216 -VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE---NPPVAFVKFSPNGKYI 271
Query: 361 LSRSFDGSLKVWDLRKMKEPLKVFEDLPNN 390
L+ + D +LK+WD K K LK + N+
Sbjct: 272 LASNLDSTLKLWDFSKGKT-LKQYTGHENS 300
Score = 139 (54.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 39/159 (24%), Positives = 77/159 (48%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH G+ W ++ ++++S+D +L+I+++ + K + + V C +
Sbjct: 127 GHKLGVNDIAWSSDSR-CVVSASDDKTLKIFEIVTSRMTKTL------KGHNNYVFCCNF 179
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDG 367
+ + G D S+++W++K G I HSD ++A+ F+ DG ++ S S+DG
Sbjct: 180 NPQSSLVVSGSFDESVRIWDVKTGMC----IKTLPAHSDPVSAVSFNRDGSLIASGSYDG 235
Query: 368 SLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFL 406
+++WD + +K D N V FSP+ + L
Sbjct: 236 LVRIWDTAN-GQCIKTLVD-DENPPVAFVKFSPNGKYIL 272
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 42/180 (23%), Positives = 86/180 (47%)
Query: 231 GEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVI 290
G G + + +GH ++ ++ P K + TSS D +++IW+++ ++ +
Sbjct: 68 GASASGSANYKLMCTLEGHTKSISSAKFSPCGKY-LGTSSADKTVKIWNMDHMICERTLT 126
Query: 291 KPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITA 350
KL V AW D +C+ D +++++ + SR + KGH++ +
Sbjct: 127 GHKLG------VNDIAWSSDSRCVVSASDDKTLKIFEIVT---SRMTKTL-KGHNNYVFC 176
Query: 351 LKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTN-VAFSPDEQLFLTGT 409
F+ +++S SFD S+++WD+ K +K LP + + V+F+ D L +G+
Sbjct: 177 CNFNPQSSLVVSGSFDESVRIWDV-KTGMCIKT---LPAHSDPVSAVSFNRDGSLIASGS 232
Score = 66 (28.3 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 29/134 (21%), Positives = 51/134 (38%)
Query: 93 PRPPQQQEDDADSVMIGPPRPPAXXXXXXXXXXXXXXXXXNRHQIPMSNEIVLKGHTKIV 152
P P + S G P P A +++ + L+GHTK +
Sbjct: 35 PAPSTSPNSISPSNPTGTPAPGASAQTPNPNAAGASASGSANYKLMCT----LEGHTKSI 90
Query: 153 SALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNLSWSPTSDR 210
S+ G + + S D TV++++ M R L GH+ V +++WS S
Sbjct: 91 SSAKFSPCGKYLGTSSADKTVKIWNMDHMICE----RTLT---GHKLGVNDIAWSSDSRC 143
Query: 211 FLCVTGSAQAKIYD 224
+ + KI++
Sbjct: 144 VVSASDDKTLKIFE 157
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 152 (58.6 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 44/150 (29%), Positives = 77/150 (51%)
Query: 241 RDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV 300
R K KGH + C ++P++ +++ S D S+RIWDV K + P + P
Sbjct: 162 RMTKTLKGHNNYVFCCNFNPQSS-LVVSGSFDESVRIWDVKTGMCIKTL--PAHSDP--- 215
Query: 301 AVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL 360
V+ +++ DG IA G DG +++W+ G + + E + + +KFS +G+ +
Sbjct: 216 -VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDE---NPPVAFVKFSPNGKYI 271
Query: 361 LSRSFDGSLKVWDLRKMKEPLKVFEDLPNN 390
L+ + D +LK+WD K K LK + N+
Sbjct: 272 LASNLDSTLKLWDFSKGKT-LKQYTGHENS 300
Score = 139 (54.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 39/159 (24%), Positives = 77/159 (48%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH G+ W ++ ++++S+D +L+I+++ + K + + V C +
Sbjct: 127 GHKLGVNDIAWSSDSR-CVVSASDDKTLKIFEIVTSRMTKTL------KGHNNYVFCCNF 179
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDG 367
+ + G D S+++W++K G I HSD ++A+ F+ DG ++ S S+DG
Sbjct: 180 NPQSSLVVSGSFDESVRIWDVKTGMC----IKTLPAHSDPVSAVSFNRDGSLIASGSYDG 235
Query: 368 SLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFL 406
+++WD + +K D N V FSP+ + L
Sbjct: 236 LVRIWDTAN-GQCIKTLVD-DENPPVAFVKFSPNGKYIL 272
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 42/180 (23%), Positives = 86/180 (47%)
Query: 231 GEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVI 290
G G + + +GH ++ ++ P K + TSS D +++IW+++ ++ +
Sbjct: 68 GASASGSANYKLMCTLEGHTKSISSAKFSPCGKY-LGTSSADKTVKIWNMDHMICERTLT 126
Query: 291 KPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITA 350
KL V AW D +C+ D +++++ + SR + KGH++ +
Sbjct: 127 GHKLG------VNDIAWSSDSRCVVSASDDKTLKIFEIVT---SRMTKTL-KGHNNYVFC 176
Query: 351 LKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTN-VAFSPDEQLFLTGT 409
F+ +++S SFD S+++WD+ K +K LP + + V+F+ D L +G+
Sbjct: 177 CNFNPQSSLVVSGSFDESVRIWDV-KTGMCIKT---LPAHSDPVSAVSFNRDGSLIASGS 232
Score = 66 (28.3 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 29/134 (21%), Positives = 51/134 (38%)
Query: 93 PRPPQQQEDDADSVMIGPPRPPAXXXXXXXXXXXXXXXXXNRHQIPMSNEIVLKGHTKIV 152
P P + S G P P A +++ + L+GHTK +
Sbjct: 35 PAPSTSPNSISPSNPTGTPAPGASAQTPNPNAAGASASGSANYKLMCT----LEGHTKSI 90
Query: 153 SALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNLSWSPTSDR 210
S+ G + + S D TV++++ M R L GH+ V +++WS S
Sbjct: 91 SSAKFSPCGKYLGTSSADKTVKIWNMDHMICE----RTLT---GHKLGVNDIAWSSDSRC 143
Query: 211 FLCVTGSAQAKIYD 224
+ + KI++
Sbjct: 144 VVSASDDKTLKIFE 157
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 176 (67.0 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 51/164 (31%), Positives = 79/164 (48%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+ H +T H T + +L+SSED + W ++ ++ + + K G A+T
Sbjct: 304 RAHESAVTGLSLHA-TGDYLLSSSED---QYWAFSDIQTGRVLTKVTDETAG-CALTCAQ 358
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFD 366
+ DG G GD I++W+LK R ++ GHS +TA+ FS +G L + + D
Sbjct: 359 FHPDGLIFGTGTGDSQIKIWDLK----ERTNVANFPGHSGPVTAIAFSENGYYLATGAQD 414
Query: 367 GSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTS 410
SLK+WDLRK+K K L NNY ++ F G S
Sbjct: 415 SSLKLWDLRKLKN-FKTIT-LDNNYEVKSLVFDQSGTYLAVGGS 456
Score = 132 (51.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 69/259 (26%), Positives = 108/259 (41%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPS-EG---HQVR 200
LKGHTK VS++ + + V S S D T+R++ G N +Q R E + G H
Sbjct: 261 LKGHTKKVSSVIYHPAQAVVFSASSDSTIRVWSVTGGNC-VQVVRAHESAVTGLSLHATG 319
Query: 201 NLSWSPTSDRFLCV----TGSAQAKIYDR-------------DGLTLGEFVKGDMYIR-- 241
+ S + D++ TG K+ D DGL G GD I+
Sbjct: 320 DYLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFHPDGLIFGTGT-GDSQIKIW 378
Query: 242 DLK------NTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLA 295
DLK N GH +T + + + T ++D SL++WD+ + K+ K +
Sbjct: 379 DLKERTNVANFPGHSGPVTAIAFS-ENGYYLATGAQDSSLKLWDLRKLKNFKTI-----T 432
Query: 296 RPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSS 355
V + +D G +A +G I+V+ K W ++ HS +T + F
Sbjct: 433 LDNNYEVKSLVFDQSGTYLA--VGGSDIRVYICKQ-WS---EVLNFSDHSGLVTGVAFGE 486
Query: 356 DGRILLSRSFDGSLKVWDL 374
+ L S D SLK + L
Sbjct: 487 HAQFLASTGMDRSLKFYSL 505
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 165 (63.1 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 40/129 (31%), Positives = 69/129 (53%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH+ + C ++HP + + T S D ++R+W + S + L R V A+
Sbjct: 424 GHLLDVDCVKFHPNSNY-LATGSTDKTVRLWSTQQGNSVR------LFTGHRGPVLALAF 476
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVE-KGHSDDITALKFSSDGRILLSRSFD 366
+GK +A D +++W+L G ++ E +GH+D+IT+L FS D ++ S S D
Sbjct: 477 SPNGKYLASAGEDQRLKLWDLASG-----TLYKELRGHTDNITSLTFSPDSSLIASASMD 531
Query: 367 GSLKVWDLR 375
S++VWD+R
Sbjct: 532 NSVRVWDIR 540
Score = 57 (25.1 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 24/85 (28%), Positives = 38/85 (44%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
+L+GH V + S +LS S D ++R +D L+SF +GH V +
Sbjct: 337 ILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWD-------LRSFTNTVLYQGHAYPVWD 389
Query: 202 LSWSPTSDRFLCVTGSAQAKIYDRD 226
L SP S F + A+++ D
Sbjct: 390 LDISPCSLYFASASHDRTARLWSFD 414
Score = 48 (22.0 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 140 SNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDF 178
+N ++ +GH V L + S S+D T R++ F
Sbjct: 375 TNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSF 413
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 175 (66.7 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 47/157 (29%), Positives = 80/157 (50%)
Query: 237 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLAR 296
D Y + L+ GH+ + C +HP + + T S D ++R+WDV ++
Sbjct: 375 DHY-QPLRIFAGHLADVNCTRFHPNSNY-VATGSADRTVRLWDV----LNGNCVRIFTGH 428
Query: 297 PGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSD 356
G + T + +G+ +A G DG + +W++ G G + KGH+D + +L+FS D
Sbjct: 429 KGPIHSLT--FSPNGRFLATGATDGRVLLWDI--GHGLM--VGELKGHTDTVCSLRFSRD 482
Query: 357 GRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQ 393
G IL S S D ++++WD +K FEDL + +Q
Sbjct: 483 GEILASGSMDNTVRLWDA------VKAFEDLETDNSQ 513
Score = 94 (38.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 267 LTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA-WDCDGKCIAGGIGDGSIQV 325
++ D R+W + ++ P G +A C + + +A G D ++++
Sbjct: 361 VSGGHDRVARLWATDHYQ-------PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 413
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFE 385
W++ G + + GH I +L FS +GR L + + DG + +WD+ L V E
Sbjct: 414 WDVLNG----NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG---HGLMVGE 466
Query: 386 DLPNNYAQTNVAFSPDEQLFLTGT 409
+ ++ FS D ++ +G+
Sbjct: 467 LKGHTDTVCSLRFSRDGEILASGS 490
Score = 89 (36.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 204 WSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
WS T + V +A + D++ + E + + +LK GH G G +
Sbjct: 257 WSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGH-SGPVYGASFSPDR 315
Query: 264 ETILTSSEDGSLRIWDVNEF 283
+L+SSEDG++R+W + F
Sbjct: 316 NYLLSSSEDGTVRLWSLQTF 335
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 173 (66.0 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 49/179 (27%), Positives = 88/179 (49%)
Query: 237 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLAR 296
D Y + L+ GH+ + C +HP + + T S D ++R+WDV ++
Sbjct: 615 DHY-QPLRIFAGHLADVNCTRFHPNSNY-VATGSADRTVRLWDV----LNGNCVRIFTGH 668
Query: 297 PGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSD 356
G + T + +G+ +A G DG + +W++ G G + KGH+D + +L+FS D
Sbjct: 669 KGPIHSLT--FSPNGRFLATGATDGRVLLWDI--GHGLM--VGELKGHTDTVCSLRFSRD 722
Query: 357 GRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERES 415
G IL S S D ++++WD K E ++ +D A ++ + Q L GT + + +
Sbjct: 723 GEILASGSMDNTVRLWDAVKAFEDVET-DDFTT--ATGHINLPENSQELLLGTYMTKST 778
Score = 96 (38.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 36/171 (21%), Positives = 71/171 (41%)
Query: 267 LTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA-WDCDGKCIAGGIGDGSIQV 325
++ D R+W + ++ P G +A C + + +A G D ++++
Sbjct: 601 VSGGHDRVARLWATDHYQ-------PLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRL 653
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFE 385
W++ G + + GH I +L FS +GR L + + DG + +WD+ L V E
Sbjct: 654 WDVLNG----NCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIG---HGLMVGE 706
Query: 386 DLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVG 436
+ ++ FS D ++ +G+ + F D E + + G
Sbjct: 707 LKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAFEDVETDDFTTATG 757
Score = 89 (36.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 204 WSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
WS T + V +A + D++ + E + + +LK GH G G +
Sbjct: 497 WSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGH-SGPVYGASFSPDR 555
Query: 264 ETILTSSEDGSLRIWDVNEF 283
+L+SSEDG++R+W + F
Sbjct: 556 NYLLSSSEDGTVRLWSLQTF 575
Score = 52 (23.4 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 27/108 (25%), Positives = 46/108 (42%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
+L GH+ V + + +LS S D TVR++ LQ+F L +GH V +
Sbjct: 538 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS-------LQTFTCLVGYKGHNYPVWD 590
Query: 202 LSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGH 249
+SP F+ A+++ D G ++ D+ T+ H
Sbjct: 591 TQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAG--HLADVNCTRFH 636
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 170 (64.9 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 44/169 (26%), Positives = 88/169 (52%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
KGH + + + ++ + + S+D +++IWD ++K+ L P +V C
Sbjct: 137 KGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWD-----ARKKHAAHTLESPFQVTAV-CF 190
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFD 366
D + I+GGI D +++W+++ + +H +GHSD IT + S +G +L+ + D
Sbjct: 191 GDTGEQVISGGI-DNEVKIWDIR----KQAVLHHLRGHSDTITGMSLSPEGDFILTNAMD 245
Query: 367 GSLKVWDLRKM---KEPLKVFEDLPNNYAQT--NVAFSPDEQLFLTGTS 410
+L+VWD+R + +KVF+ +N+ + A+SP +G++
Sbjct: 246 NTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSA 294
Score = 119 (46.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 33/134 (24%), Positives = 63/134 (47%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA- 301
L + +GH +T P+ + ILT++ D +LR+WDV + ++ +K
Sbjct: 217 LHHLRGHSDTITGMSLSPEG-DFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEK 275
Query: 302 -VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL 360
+ CAW I G D + +W++ +R ++ GH+ + A+ FS ++
Sbjct: 276 NLLRCAWSPGSDKITSGSADRHVYIWDVN----TRRILYKLPGHNGSVNAVDFSPKEPLI 331
Query: 361 LSRSFDGSLKVWDL 374
LS S D +L + ++
Sbjct: 332 LSGSSDKTLYLGEI 345
Score = 114 (45.2 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 39/154 (25%), Positives = 70/154 (45%)
Query: 262 TKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDG 321
T E +++ D ++IWD+ +KQ + L R +T + +G I D
Sbjct: 193 TGEQVISGGIDNEVKIWDI-----RKQAVLHHL-RGHSDTITGMSLSPEGDFILTNAMDN 246
Query: 322 SIQVWNLKPGWGSRPDIHVEKGHSDDI--TALK--FSSDGRILLSRSFDGSLKVWDLRKM 377
+++VW+++P + V +GH + L+ +S + S S D + +WD+
Sbjct: 247 TLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTR 306
Query: 378 KEPLKVFEDLPNNYAQTN-VAFSPDEQLFLTGTS 410
+ + LP + N V FSP E L L+G+S
Sbjct: 307 R----ILYKLPGHNGSVNAVDFSPKEPLILSGSS 336
Score = 58 (25.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 22/86 (25%), Positives = 37/86 (43%)
Query: 141 NEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVR 200
N + + GH+ V GS + + S D T+ +D R + F+ G+ V
Sbjct: 90 NVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDI-ATGQRQRRFK----GHGNFVN 144
Query: 201 NLSWSPTSDRFLCVTGSAQA--KIYD 224
++ S + LC +GS KI+D
Sbjct: 145 SVQGSRRGQQLLC-SGSDDRTIKIWD 169
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 164 (62.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 37/129 (28%), Positives = 68/129 (52%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTC-A 306
GH+ G+ C ++HP + + T S D ++R+W + S + G C A
Sbjct: 421 GHLAGVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGNSVRLFT-------GHCGPVRCLA 472
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFD 366
+ +G+ + D +++W+L G + D+H GH+DDIT++ FS D ++ S S D
Sbjct: 473 FSPNGQYLVSAGEDQLLKLWDLASGTLYK-DLH---GHTDDITSVTFSLDSSVIASASMD 528
Query: 367 GSLKVWDLR 375
S+++WD++
Sbjct: 529 NSVRIWDIK 537
Score = 56 (24.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 140 SNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDF 178
+N ++ +GH V L + S SYD+T R++ F
Sbjct: 372 TNTVLYQGHAYPVWDLDISPHSLFFASASYDHTARLWSF 410
Score = 50 (22.7 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 25/85 (29%), Positives = 37/85 (43%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
VL GH V + S +LS S D ++R +D L+SF +GH V +
Sbjct: 334 VLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWD-------LESFTNTVLYQGHAYPVWD 386
Query: 202 LSWSPTSDRFLCVTGSAQAKIYDRD 226
L SP S F + A+++ D
Sbjct: 387 LDISPHSLFFASASYDHTARLWSFD 411
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 167 (63.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 40/129 (31%), Positives = 70/129 (54%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH+ + C ++HP + + T S D ++R+W + S + L R V + A+
Sbjct: 442 GHLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGNSVR------LFTGHRGPVLSLAF 494
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVE-KGHSDDITALKFSSDGRILLSRSFD 366
+GK +A D +++W+L G ++ E +GH+D+IT+L FS D ++ S S D
Sbjct: 495 SPNGKYLASAGEDQRLKLWDLASG-----TLYKELRGHTDNITSLTFSPDSSLIASASMD 549
Query: 367 GSLKVWDLR 375
S++VWD+R
Sbjct: 550 NSVRVWDIR 558
Score = 53 (23.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 140 SNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDF 178
+N ++ +GH V L + SGS+D T R++ F
Sbjct: 393 TNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSF 431
Score = 49 (22.3 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
+L+GH V + S +LS S D ++R +D L SF +GH V +
Sbjct: 355 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD-------LGSFTNTVLYQGHAYPVWD 407
Query: 202 LSWSPTSDRFLCVTGSAQAKIYDRD 226
L SP S F + A+++ D
Sbjct: 408 LDISPYSLYFASGSHDRTARLWSFD 432
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 173 (66.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 50/180 (27%), Positives = 92/180 (51%)
Query: 263 KETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCD--GKCIAGGIGD 320
+E I+ S+ GS+R+WD+ K +++ + + C+ D G+ +A G D
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAK----ILRTLMGHKANI----CSLDFHPYGEFVASGSQD 126
Query: 321 GSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEP 380
+I++W+++ + + +GHS + L+FS DG+ L S + D ++K+WDL K
Sbjct: 127 TNIKLWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK-- 180
Query: 381 LKVFEDLPNNYAQTNVA-FSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGISP 439
+ + P + NV F P+E L +G+S + T + F+D EK ++VS + P
Sbjct: 181 --MMSEFPGHTGPVNVVEFHPNEYLLASGSS---DRT----IRFWDLEKFQVVSCIEGEP 231
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 166 (63.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 40/129 (31%), Positives = 70/129 (54%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH+ + C ++HP + + T S D ++R+W + S + L R V + A+
Sbjct: 420 GHLADVDCVKFHPNSNY-LATGSTDKTVRLWSTQQGNSVR------LFTGHRGPVLSLAF 472
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVE-KGHSDDITALKFSSDGRILLSRSFD 366
+GK +A D +++W+L G ++ E +GH+D+IT+L FS D ++ S S D
Sbjct: 473 SPNGKYLASAGEDQRLKLWDLASG-----TLYKELRGHTDNITSLTFSPDSSLVASASMD 527
Query: 367 GSLKVWDLR 375
S++VWD+R
Sbjct: 528 NSVRVWDIR 536
Score = 53 (23.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 25/85 (29%), Positives = 37/85 (43%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
VL+GH V + S +LS S D ++R +D L SF +GH V +
Sbjct: 333 VLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD-------LGSFTNTVLYQGHAYPVWD 385
Query: 202 LSWSPTSDRFLCVTGSAQAKIYDRD 226
L SP S F + A+++ D
Sbjct: 386 LDISPHSLYFASASHDRTARLWSFD 410
Score = 48 (22.0 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 140 SNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDF 178
+N ++ +GH V L + S S+D T R++ F
Sbjct: 371 TNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSF 409
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 166 (63.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 40/129 (31%), Positives = 70/129 (54%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH+ + C ++HP + + T S D ++R+W + S + L R V + A+
Sbjct: 424 GHLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGNSVR------LFTGHRGPVLSLAF 476
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVE-KGHSDDITALKFSSDGRILLSRSFD 366
+GK +A D +++W+L G ++ E +GH+D+IT+L FS D ++ S S D
Sbjct: 477 SPNGKYLASAGEDQRLKLWDLASG-----TLYKELRGHTDNITSLTFSPDSGLIASASMD 531
Query: 367 GSLKVWDLR 375
S++VWD+R
Sbjct: 532 NSVRVWDIR 540
Score = 53 (23.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 140 SNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDF 178
+N ++ +GH V L + SGS+D T R++ F
Sbjct: 375 TNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSF 413
Score = 49 (22.3 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
+L+GH V + S +LS S D ++R +D L SF +GH V +
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD-------LGSFTNTVLYQGHAYPVWD 389
Query: 202 LSWSPTSDRFLCVTGSAQAKIYDRD 226
L SP S F + A+++ D
Sbjct: 390 LDISPYSLYFASGSHDRTARLWSFD 414
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 173 (66.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 50/180 (27%), Positives = 92/180 (51%)
Query: 263 KETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCD--GKCIAGGIGD 320
+E I+ S+ GS+R+WD+ K +++ + + C+ D G+ +A G D
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAK----ILRTLMGHKANI----CSLDFHPYGEFVASGSQD 126
Query: 321 GSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEP 380
+I++W+++ + + +GHS + L+FS DG+ L S + D ++K+WDL K
Sbjct: 127 TNIKLWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK-- 180
Query: 381 LKVFEDLPNNYAQTNVA-FSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGISP 439
+ + P + NV F P+E L +G+S + T + F+D EK ++VS + P
Sbjct: 181 --MMSEFPGHTGPVNVVEFHPNEYLLASGSS---DRT----IRFWDLEKFQVVSCIEGEP 231
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 173 (66.0 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 50/180 (27%), Positives = 92/180 (51%)
Query: 263 KETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCD--GKCIAGGIGD 320
+E I+ S+ GS+R+WD+ K +++ + + C+ D G+ +A G D
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAK----ILRTLMGHKANI----CSLDFHPYGEFVASGSQD 126
Query: 321 GSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEP 380
+I++W+++ + + +GHS + L+FS DG+ L S + D ++K+WDL K
Sbjct: 127 TNIKLWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK-- 180
Query: 381 LKVFEDLPNNYAQTNVA-FSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGISP 439
+ + P + NV F P+E L +G+S + T + F+D EK ++VS + P
Sbjct: 181 --MMSEFPGHTGPVNVVEFHPNEYLLASGSS---DRT----IRFWDLEKFQVVSCIEGEP 231
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 173 (66.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 50/180 (27%), Positives = 92/180 (51%)
Query: 263 KETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCD--GKCIAGGIGD 320
+E I+ S+ GS+R+WD+ K +++ + + C+ D G+ +A G D
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAK----ILRTLMGHKANI----CSLDFHPYGEFVASGSQD 126
Query: 321 GSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEP 380
+I++W+++ + + +GHS + L+FS DG+ L S + D ++K+WDL K
Sbjct: 127 TNIKLWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK-- 180
Query: 381 LKVFEDLPNNYAQTNVA-FSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGISP 439
+ + P + NV F P+E L +G+S + T + F+D EK ++VS + P
Sbjct: 181 --MMSEFPGHTGPVNVVEFHPNEYLLASGSS---DRT----IRFWDLEKFQVVSCIEGEP 231
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 169 (64.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+P +L++S+D ++ +WD++ + +V+ K G AV +W + + G
Sbjct: 185 WNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPS-HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 304 RNLKLKLHSFESHKDEIFQ--VQWSPHNETILASSGTDR 340
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 169 (64.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+P +L++S+D ++ +WD++ + +V+ K G AV +W + + G
Sbjct: 185 WNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPS-HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 304 RNLKLKLHSFESHKDEIFQ--VQWSPHNETILASSGTDR 340
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 169 (64.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+P +L++S+D ++ +WD++ + +V+ K G AV +W + + G
Sbjct: 185 WNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPS-HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 304 RNLKLKLHSFESHKDEIFQ--VQWSPHNETILASSGTDR 340
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 169 (64.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 38/159 (23%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+P +L++S+D ++ +WD++ + +++ K G AV +W + + G
Sbjct: 185 WNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPS-HAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 304 RNLKLKLHSFESHKDEIFQ--VQWSPHNETILASSGTDR 340
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 168 (64.2 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+ +L++S+D ++ +WD+N + +++ K G AV AW + + G
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDVAWHLLHESLFG 243
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H+ H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 244 SVADDQKLMMWDTRSNTTSKPS-HLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 303 RNLKLKLHTFESHKDEIFQV-VHWSPHNETILASSGTDR 340
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 151 (58.2 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 40/145 (27%), Positives = 74/145 (51%)
Query: 263 KETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCD--GKCIAGGIGD 320
+E I+ S+ GS+R+WD+ K +++ + + C+ D G+ +A G D
Sbjct: 79 EELIVAGSQSGSIRVWDLEAAK----ILRTLMGHKANI----CSLDFHPYGEFVASGSQD 130
Query: 321 GSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEP 380
+I++W+++ + + +GHS + L+FS DG+ L S + D ++K+WDL K
Sbjct: 131 TNIKLWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK-- 184
Query: 381 LKVFEDLPNNYAQTNVA-FSPDEQL 404
+ + P + NV F P+E L
Sbjct: 185 --MMSEFPGHTGPVNVVEFHPNEYL 207
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 126 (49.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 45/144 (31%), Positives = 71/144 (49%)
Query: 261 KTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGD 320
K E ++++S+D ++ +WD S K V + L V T + D IA D
Sbjct: 372 KIVEKLVSASDDFTMYLWDPES--SSKPVAR-LLGHQKEVNHVT--FSPDMAYIASAGFD 426
Query: 321 GSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEP 380
+++WN + G I +GH + FS+D R+L+S S D +LKVW++R K
Sbjct: 427 NHVKLWNGRDG----KFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGK-- 480
Query: 381 LKVFEDLPNNYAQT-NVAFSPDEQ 403
+ EDLP + + V +SPD Q
Sbjct: 481 --LSEDLPGHKDEVFAVDWSPDGQ 502
Score = 110 (43.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 42/165 (25%), Positives = 79/165 (47%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNL 202
LKGHT V A++ +G+ + +GS D TVR++D + L + P +GH + +L
Sbjct: 187 LKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAK-KGQALGA-----PLKGHVKWITSL 240
Query: 203 SWSPTSDRFLCVTGSAQAKIYDRDG-LTLGEFV--KGDMYIRDLKNTKGHICGLTCGEWH 259
+W P L +G + +D + + + + + D+ + GH +TC W
Sbjct: 241 AWEPYH---LQQSGHPRLASASKDSTVRIWDVISKRADIVL------SGHKGSVTCVRWG 291
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT 304
K I TSS D ++++W+ ++ + Q + R +A++T
Sbjct: 292 GTGK--IYTSSHDRTIKVWN-SQTGTLIQTLSAHAHRVNHLALST 333
Score = 100 (40.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 298 GRV-AVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSD 356
G V AV C + D + + D +++VWN++ G S D+ GH D++ A+ +S D
Sbjct: 445 GHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSE-DL---PGHKDEVFAVDWSPD 500
Query: 357 GRILLSRSFDGSLKVW 372
G+ + S D ++++W
Sbjct: 501 GQKVGSGGKDKAIRIW 516
Score = 91 (37.1 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 42/143 (29%), Positives = 69/143 (48%)
Query: 145 LKGHTKIVSALAVDH-SGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
+ GH + + A + S S ++SGS D T R++D + L +GH V
Sbjct: 144 IAGHGEAILATSFSPVSSSTMVSGSGDSTARIWD-------CDTGTPLHTLKGHTSWVLA 196
Query: 202 LSWSPTSDRFLCVTGSAQ--AKIYD-RDGLTLGEFVKGDM-YIRDLKNTKGHICGLTCGE 257
+S+SP + TGS +I+D + G LG +KG + +I L H+ G
Sbjct: 197 VSYSPNGA--MIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHL--QQSG- 251
Query: 258 WHPKTKETILTSSEDGSLRIWDV 280
HP+ + ++S+D ++RIWDV
Sbjct: 252 -HPR----LASASKDSTVRIWDV 269
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+P +L++S+D ++ +WD++ + +V+ K G AV +W + + G
Sbjct: 150 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 209
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 210 SVADDQKLMIWDTRSNNTSKPS-HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 268
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 269 RNLKLKLHSFESHKDEIFQ--VQWSPHNETILASSGTDR 305
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 167 (63.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 67/276 (24%), Positives = 125/276 (45%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNL 202
LKGHT V +A D G + S S D +++++DFQ QS+ ++ GH V ++
Sbjct: 146 LKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQ------QSYECIKTMHGHDHNVSSV 199
Query: 203 SWSPTSDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLK-NTKGHICGLTCGEWHP 260
++ P D L + K+++ G + + ++R ++ + +G I TC +
Sbjct: 200 AFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFA-TCS--ND 256
Query: 261 KTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPG---RVAVTTCAWDCDGKCIAGG 317
+T LT+S+D + + D +E + P+ A G +A G
Sbjct: 257 QTIRVWLTNSKDCKVELRD-HEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASG 315
Query: 318 IGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKM 377
D +I++W++ G + GH + + L F G+ L+S S D +++VWDLR
Sbjct: 316 SRDKTIRIWDVSVGLC----LLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRN- 370
Query: 378 KEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
K +K + + T++ F ++G SV++
Sbjct: 371 KRCMKTL--YAHQHFCTSIDFHKAHPYVISG-SVDQ 403
Score = 130 (50.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 36/128 (28%), Positives = 67/128 (52%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV-AVTTCA 306
GH +T +HP ++++SED ++RIWD E ++ +K G +V A
Sbjct: 106 GHRASITRVIFHP-IFALMVSASEDATIRIWDF-ETGEYERSLK------GHTDSVQDVA 157
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFD 366
+D GK +A D SI++W+ + + +H GH +++++ F G +LS S D
Sbjct: 158 FDAQGKLLASCSADLSIKLWDFQQSYECIKTMH---GHDHNVSSVAFVPAGDYVLSASRD 214
Query: 367 GSLKVWDL 374
++K+W++
Sbjct: 215 RTIKMWEV 222
Score = 112 (44.5 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 26/81 (32%), Positives = 45/81 (55%)
Query: 320 DGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKE 379
D +I++W+ + G R KGH+D + + F + G++L S S D S+K+WD ++ E
Sbjct: 129 DATIRIWDFETGEYERS----LKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYE 184
Query: 380 PLKVFEDLPNNYAQTNVAFSP 400
+K +N + +VAF P
Sbjct: 185 CIKTMHGHDHNVS--SVAFVP 203
Score = 49 (22.3 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 137 IPMSNE-IVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQ 179
IP E L GH ++ + + ++S S D T+R++DF+
Sbjct: 95 IPRPPEKFSLTGHRASITRVIFHPIFALMVSASEDATIRIWDFE 138
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 167 (63.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+ +L++S+D ++ +WD+N + +++ K G AV AW + + G
Sbjct: 175 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFG 234
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H+ H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 235 SVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 293
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 294 RNLKLKLHTFESHKDEIFQ--VHWSPHNETILASSGTDR 330
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 167 (63.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+ +L++S+D ++ +WD+N + +++ K G AV AW + + G
Sbjct: 175 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFG 234
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H+ H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 235 SVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 293
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 294 RNLKLKLHTFESHKDEIFQ--VHWSPHNETILASSGTDR 330
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+P +L++S+D ++ +WD++ + +V+ K G AV +W + + G
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPS-HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 304 RNLKLKLHSFESHKDEIFQ--VQWSPHNETILASSGTDR 340
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+P +L++S+D ++ +WD++ + +V+ K G AV +W + + G
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPS-HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 304 RNLKLKLHSFESHKDEIFQ--VQWSPHNETILASSGTDR 340
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+P +L++S+D ++ +WD++ + +V+ K G AV +W + + G
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPS-HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 304 RNLKLKLHSFESHKDEIFQ--VQWSPHNETILASSGTDR 340
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+ +L++S+D ++ +WD+N + +++ K G AV AW + + G
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFG 243
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H+ H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 303 RNLKLKLHTFESHKDEIFQ--VHWSPHNETILASSGTDR 339
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+P +L++S+D ++ +WD++ + +V+ K G AV +W + + G
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPS-HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 304 RNLKLKLHSFESHKDEIFQ--VQWSPHNETILASSGTDR 340
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+ +L++S+D ++ +WD+N + +++ K G AV AW + + G
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFG 243
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H+ H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 303 RNLKLKLHTFESHKDEIFQ--VHWSPHNETILASSGTDR 339
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+P +L++S+D ++ +WD++ + +V+ K G AV +W + + G
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPS-HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 304 RNLKLKLHSFESHKDEIFQ--VQWSPHNETILASSGTDR 340
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+ +L++S+D ++ +WD+N + +++ K G AV AW + + G
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFG 243
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H+ H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 303 RNLKLKLHTFESHKDEIFQ--VHWSPHNETILASSGTDR 339
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+ +L++S+D ++ +WD+N + +++ K G AV AW + + G
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFG 243
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H+ H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 303 RNLKLKLHTFESHKDEIFQ--VHWSPHNETILASSGTDR 339
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+ +L++S+D ++ +WD+N + +++ K G AV AW + + G
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFG 243
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H+ H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 303 RNLKLKLHTFESHKDEIFQ--VHWSPHNETILASSGTDR 339
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+P +L++S+D ++ +WD++ + +V+ K G AV +W + + G
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPS-HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 304 RNLKLKLHSFESHKDEIFQ--VQWSPHNETILASSGTDR 340
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+P +L++S+D ++ +WD++ + +V+ K G AV +W + + G
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPS-HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 304 RNLKLKLHSFESHKDEIFQ--VQWSPHNETILASSGTDR 340
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+ +L++S+D ++ +WD+N + +++ K G AV AW + + G
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFG 243
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H+ H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 303 RNLKLKLHTFESHKDEIFQ--VHWSPHNETILASSGTDR 339
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+P +L++S+D ++ +WD++ + +V+ K G AV +W + + G
Sbjct: 185 WNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPS-HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 304 RNLKLKLHSFESHKDEIFQ--VQWSPHNETILASSGTDR 340
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 167 (63.8 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+ +L++S+D ++ +WD+N + +++ K G AV AW + + G
Sbjct: 184 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFG 243
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H+ H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 303 RNLKLKLHTFESHKDEIFQ--VHWSPHNETILASSGTDR 339
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 167 (63.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+ +L++S+D ++ +WD+N + +++ K G AV AW + + G
Sbjct: 228 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFG 287
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H+ H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 288 SVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 346
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 347 RNLKLKLHTFESHKDEIFQ--VHWSPHNETILASSGTDR 383
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 167 (63.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+ +L++S+D ++ +WD+N + +++ K G AV AW + + G
Sbjct: 228 WNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFG 287
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H+ H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 288 SVADDQKLMIWDTRSNTTSKPS-HLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 346
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 347 RNLKLKLHTFESHKDEIFQ--VHWSPHNETILASSGTDR 383
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 166 (63.5 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 64/270 (23%), Positives = 118/270 (43%)
Query: 151 IVSALAVDHSGSRVLSGSYDYTVRMYD-FQGMNSRLQSFRQLEPSEGHQVRNLSWSPTSD 209
++S + + ++ + YD Y F +N +++ ++ EG +V + P
Sbjct: 76 LISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRIN-HEG-EVNRARYMPQKS 133
Query: 210 RFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHI---CGLTCGEWHPKTKETI 266
+ T S A +Y D L V D L KGH GL+ W+P + I
Sbjct: 134 NIIA-TKSPHADVYIFDYLKHSA-VPRDNTFNPLIRLKGHTKEGYGLS---WNPNKEGLI 188
Query: 267 LTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAGGIGDGS-IQ 324
L++S+D ++ WD+N ++ ++ K G +V AW + G +GD +
Sbjct: 189 LSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLL 248
Query: 325 VWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDLRKMKEPLKV 383
+W+++ S P H HS ++ L F+ +L+ S D ++ +WDLR ++ L
Sbjct: 249 IWDVRT---STPG-HCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHS 304
Query: 384 FEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
FE + Q V +SP + L + ++
Sbjct: 305 FESHRDEIFQ--VQWSPHNETILASSGTDK 332
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 53/200 (26%), Positives = 85/200 (42%)
Query: 184 RLQSFRQLEPSEGHQVRN--LSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIR 241
R +F L +GH LSW+P + L ++ S + D + + V G++ +
Sbjct: 158 RDNTFNPLIRLKGHTKEGYGLSWNPNKEG-LILSASDDQTVCHWD-INANQNVAGELQAK 215
Query: 242 DLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
D+ KGH + WH + +D L IWDV + I A
Sbjct: 216 DV--FKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRT-STPGHCIDAHSAE----- 267
Query: 302 VTTCAWDCDGKCI-AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGR-I 359
V A++ + I A G D ++ +W+L+ R +H + H D+I +++S I
Sbjct: 268 VNCLAFNPYSEFILATGSADKTVALWDLR---NLRMKLHSFESHRDEIFQVQWSPHNETI 324
Query: 360 LLSRSFDGSLKVWDLRKMKE 379
L S D L VWDL K+ E
Sbjct: 325 LASSGTDKRLHVWDLSKIGE 344
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 166 (63.5 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 64/270 (23%), Positives = 118/270 (43%)
Query: 151 IVSALAVDHSGSRVLSGSYDYTVRMYD-FQGMNSRLQSFRQLEPSEGHQVRNLSWSPTSD 209
++S + + ++ + YD Y F +N +++ ++ EG +V + P
Sbjct: 76 LISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRIN-HEG-EVNRARYMPQKS 133
Query: 210 RFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHI---CGLTCGEWHPKTKETI 266
+ T S A +Y D L V D L KGH GL+ W+P + I
Sbjct: 134 NIIA-TKSPHADVYIFDYLKHSA-VPRDNTFNPLIRLKGHTKEGYGLS---WNPNKEGLI 188
Query: 267 LTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAGGIGDGS-IQ 324
L++S+D ++ WD+N ++ ++ K G +V AW + G +GD +
Sbjct: 189 LSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLL 248
Query: 325 VWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDLRKMKEPLKV 383
+W+++ S P H HS ++ L F+ +L+ S D ++ +WDLR ++ L
Sbjct: 249 IWDVRT---STPG-HCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRMKLHS 304
Query: 384 FEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
FE + Q V +SP + L + ++
Sbjct: 305 FESHRDEIFQ--VQWSPHNETILASSGTDK 332
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 53/200 (26%), Positives = 85/200 (42%)
Query: 184 RLQSFRQLEPSEGHQVRN--LSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIR 241
R +F L +GH LSW+P + L ++ S + D + + V G++ +
Sbjct: 158 RDNTFNPLIRLKGHTKEGYGLSWNPNKEG-LILSASDDQTVCHWD-INANQNVAGELQAK 215
Query: 242 DLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
D+ KGH + WH + +D L IWDV + I A
Sbjct: 216 DV--FKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDVRT-STPGHCIDAHSAE----- 267
Query: 302 VTTCAWDCDGKCI-AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGR-I 359
V A++ + I A G D ++ +W+L+ R +H + H D+I +++S I
Sbjct: 268 VNCLAFNPYSEFILATGSADKTVALWDLR---NLRMKLHSFESHRDEIFQVQWSPHNETI 324
Query: 360 LLSRSFDGSLKVWDLRKMKE 379
L S D L VWDL K+ E
Sbjct: 325 LASSGTDKRLHVWDLSKIGE 344
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 166 (63.5 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 38/159 (23%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+P +L++S+D ++ +WD++ + +++ K G AV +W + + G
Sbjct: 185 WNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFG 244
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 245 SVADDQKLMIWDTRSNNTSKPS-HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 304 RNLKLKLHSFESHKDEIFQ--VQWSPHNETILASSGTDR 340
Score = 118 (46.6 bits), Expect = 0.00080, P = 0.00080
Identities = 50/191 (26%), Positives = 79/191 (41%)
Query: 196 GHQVRN--LSWSPT-SDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNT-KGHIC 251
GHQ LSW+P S L + ++D G +G I D K GH
Sbjct: 175 GHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPK----EGK--IVDAKTIFTGHTA 228
Query: 252 GLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTC-AWDCD 310
+ WH + + ++D L IWD + K P + A C +++
Sbjct: 229 VVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSK----PSHSVDAHTAEVNCLSFNPY 284
Query: 311 GKCI-AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGR-ILLSRSFDGS 368
+ I A G D ++ +W+L+ + +H + H D+I +++S IL S D
Sbjct: 285 SEFILATGSADKTVALWDLR---NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR 341
Query: 369 LKVWDLRKMKE 379
L VWDL K+ E
Sbjct: 342 LNVWDLSKIGE 352
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 167 (63.8 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 51/167 (30%), Positives = 85/167 (50%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+G + GL+ H T + +L+SS+D + W ++ ++ + + K G A+T
Sbjct: 307 EGSVTGLSL---HA-TGDYLLSSSDD---QYWAFSDIQTGRVLTKVTDESSG-CALTCAQ 358
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFD 366
+ DG G D I++W+LK R ++ GHS IT++ FS +G L + + D
Sbjct: 359 FHPDGLIFGTGTMDSQIKIWDLK----ERTNVANFPGHSGPITSIAFSENGYYLATAADD 414
Query: 367 GSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPD-EQLFLTGTSVE 412
S+K+WDLRK+K K + L NN+ ++ F L L GT V+
Sbjct: 415 SSVKLWDLRKLKN-FKTLQ-LDNNFEVKSLIFDQSGTYLALGGTDVQ 459
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 164 (62.8 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 40/129 (31%), Positives = 69/129 (53%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH+ + C ++HP + + T S D ++R+W + S + L R V + A+
Sbjct: 424 GHLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGNSVR------LFTGHRGPVLSLAF 476
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVE-KGHSDDITALKFSSDGRILLSRSFD 366
+GK +A D +++W+L G + E +GH+D+IT+L FS D ++ S S D
Sbjct: 477 SPNGKYLASAGEDQRLKLWDLASG-----TLFKELRGHTDNITSLTFSPDSSLIASASMD 531
Query: 367 GSLKVWDLR 375
S++VWD+R
Sbjct: 532 NSVRVWDIR 540
Score = 50 (22.7 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 140 SNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDF 178
+N ++ +GH V + + SGS+D T R++ F
Sbjct: 375 TNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSF 413
Score = 47 (21.6 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 24/85 (28%), Positives = 37/85 (43%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
VL+GH V + S +LS S D ++R +D L SF +GH V +
Sbjct: 337 VLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD-------LGSFTNTVLYQGHAYPVWD 389
Query: 202 LSWSPTSDRFLCVTGSAQAKIYDRD 226
+ SP S F + A+++ D
Sbjct: 390 VDISPYSLYFASGSHDRTARLWSFD 414
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 165 (63.1 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 47/186 (25%), Positives = 91/186 (48%)
Query: 231 GEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVI 290
GE D+++R + +G+ GL+ W+P +L++S+D ++ +WD++ + +V+
Sbjct: 165 GE-CNSDLHLRGHQK-EGY--GLS---WNPYLSGYLLSASDDHTICLWDISAVPKEGKVV 217
Query: 291 KPKLARPGRVAVTT-CAWDCDGKCIAGGIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDI 348
K G AV +W + + G + D + +W+ + S+P H ++ ++
Sbjct: 218 GAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPS-HSVDAYTAEV 276
Query: 349 TALKFSSDGR-ILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLT 407
L F+ + IL S S D ++ +WDLR +K L FE + Q V +SP + L
Sbjct: 277 NCLSFNPNSEFILASGSPDKTVALWDLRNLKLKLHSFESHKDEIFQ--VQWSPHNETILA 334
Query: 408 GTSVER 413
+ +R
Sbjct: 335 SSGTDR 340
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 168 (64.2 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 45/151 (29%), Positives = 74/151 (49%)
Query: 240 IRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGR 299
I+ L+ GH+ + C +WHP I T S D ++R+WDV + + I R
Sbjct: 492 IQPLRIMAGHLSDVDCVQWHPNCNY-IATGSSDKTVRLWDVQTGECVRIFIGH------R 544
Query: 300 VAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRI 359
V + A DG+ +A G DG+I +W+L P + GH+ + +L +S +G +
Sbjct: 545 SMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLM----GHNSCVWSLSYSGEGSL 600
Query: 360 LLSRSFDGSLKVWDLRKMKEPLKVFEDLPNN 390
L S S D ++K+WD+ + K E N+
Sbjct: 601 LASGSADCTVKLWDVTSSTKLTKAEEKNGNS 631
Score = 136 (52.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 63/269 (23%), Positives = 111/269 (41%)
Query: 156 AVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSWSPTSDRFLCVT 215
++ H GS V G D +++++D + Q E Q S P R +
Sbjct: 359 SISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQ----SIGPNGRRSYTLL 414
Query: 216 GSAQAKIYDRDGLTLGEFV---KGDMYIRDLKNTKGH---IC--GLTCGEWHPKTK---E 264
+Y G+FV D IR L +TK + +C G W +
Sbjct: 415 LGHSGPVYSATFSPPGDFVLSSSADTTIR-LWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 265 TILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA-WDCDGKCIAGGIGDGSI 323
+ S D + RIW ++ I+P G ++ C W + IA G D ++
Sbjct: 474 YFASCSHDRTARIWSMDR-------IQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTV 526
Query: 324 QVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMK--EPL 381
++W+++ G R I + GH + +L S DGR + S DG++ +WDL + PL
Sbjct: 527 RLWDVQTGECVR--IFI--GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPL 582
Query: 382 KVFEDLPNNYAQTNVAFSPDEQLFLTGTS 410
+ +N ++++S + L +G++
Sbjct: 583 -----MGHNSCVWSLSYSGEGSLLASGSA 606
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 165 (63.1 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 65/248 (26%), Positives = 111/248 (44%)
Query: 148 HTKIVSALAVDHSGSRVLSGSYDYT--VRMYDF-QGMNS--RLQSFRQLEPSE------- 195
H V+ + G+ V + S+ V ++D Q + + Q +Q E SE
Sbjct: 159 HQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPVFTF 218
Query: 196 -GHQVRN--LSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICG 252
GHQ + WSP++D L TG + I+ + G + K D R L GH
Sbjct: 219 GGHQQEGFAIDWSPSADGVLA-TGDCRRDIHVWTPVEDGTW-KVDQ--RPLA---GHSQS 271
Query: 253 LTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGK 312
+ +W P + + + S D ++RIWD + ++ + A V V + W+ +
Sbjct: 272 VEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTCEDAHQSDVNVIS--WNRNEP 329
Query: 313 CIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFS-SDGRILLSRSFDGSLKV 371
IA G DG + +W+L+ +P I K H+D IT +++S ++ +L S D + +
Sbjct: 330 FIASGGDDGYLHIWDLRQFQSKKP-IATFKHHTDHITTVEWSPAEATVLASGGDDDQIAL 388
Query: 372 WDLRKMKE 379
WDL K+
Sbjct: 389 WDLAVEKD 396
>FB|FBgn0040207 [details] [associations]
symbol:kat80 "katanin 80" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;NAS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0008017 "microtubule
binding" evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 GO:GO:0051013 HSSP:P16649
GO:GO:0008352 PANTHER:PTHR19845 FlyBase:FBgn0040207 EMBL:AF223065
ProteinModelPortal:Q9NHF0 PRIDE:Q9NHF0 InParanoid:Q9NHF0
ArrayExpress:Q9NHF0 Bgee:Q9NHF0 Uniprot:Q9NHF0
Length = 823
Score = 173 (66.0 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 85/349 (24%), Positives = 149/349 (42%)
Query: 248 GHICGLTCGEWHPKTKETILTSSED-GSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
GH + C + K+ + S++D G +R WD+N K + + + GR T
Sbjct: 58 GHNRSIDCVRF--AYKDNFVYSADDIGIIRRWDLNSQKIYS-TLNGHM-KSGR----TLD 109
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFD 366
++ G+ + G D ++++W+++ I V +GH + ++KFS DG + S +
Sbjct: 110 FNPSGEYVVSGSNDTTVRLWDVQ---NENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLE 166
Query: 367 GSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDR 426
GS+ +WD+RK K+ ++ D P A T V F P E L G V+ G + YD
Sbjct: 167 GSILIWDIRKSKQIMEFIADPPVT-AITCVQFHPFEFLLAAGR-VD------GTVSIYDL 218
Query: 427 EKLELVSRV----GISPACSVV----QCAWHPKLNQIFATAGDKSQGGTHI------LYD 472
E +LVS+ G + C +C + + I + + HI L D
Sbjct: 219 EHQQLVSQTTHFYGQAIRCITFSDNGECLFVGSSSGISVIGWEPDRELDHIKSTWSFLAD 278
Query: 473 PRLSERGALVCVARAPRKKSVDDFE---VAPVIHNPHALPLFR-DQPSRK---RQREKLL 525
++ L+C S++ V P P++LP F+ + +RK R +K
Sbjct: 279 MKVVNN-KLICGCHEIDTVSINTISLDRVIPFYQPPNSLPNFKHNSTNRKSFTRGNQKF- 336
Query: 526 KDPIKSHKPEVPVTGPGHGGRVGASKGS----LLTQYLLKQGGMIKETW 570
+ + KP V G + G S + ++ + LL+ G + W
Sbjct: 337 RLSVGGAKP-AQVQEEHEGDKSGLSSPNYSLEVVNERLLEVAGRLSSKW 384
Score = 43 (20.2 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQS 187
+K H V++L + +G +++G D V ++ G N S
Sbjct: 14 IKAHDSRVTSLDLGETGRVLVTGGEDRNVNLWAI-GQNECFMS 55
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 158 (60.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 48/164 (29%), Positives = 82/164 (50%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+GH G++ W + T ++S+D +LRIWD +S + +K + R G C
Sbjct: 82 EGHSSGISDLAWSSDSHYTC-SASDDCTLRIWDA---RSPYECLK--VLR-GHTNFVFCV 134
Query: 307 -WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSF 365
++ I G D +I++W +K G + + K HS I+++ F+ DG +++S S
Sbjct: 135 NFNPPSNLIVSGSFDETIRIWEVKTG----KCVRMIKAHSMPISSVHFNRDGSLIVSASH 190
Query: 366 DGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
DGS K+WD ++ LK D + A + FSP+ + L T
Sbjct: 191 DGSCKIWDAKE-GTCLKTLID-DKSPAVSFAKFSPNGKFILVAT 232
Score = 139 (54.0 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 58/222 (26%), Positives = 106/222 (47%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
LK +GH + C ++P + I++ S D ++RIW+V K+ K V ++ + + +
Sbjct: 121 LKVLRGHTNFVFCVNFNPPSN-LIVSGSFDETIRIWEV---KTGKCV---RMIKAHSMPI 173
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
++ ++ DG I DGS ++W+ K G + I +K S ++ KFS +G+ +L
Sbjct: 174 SSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLID-DK--SPAVSFAKFSPNGKFILV 230
Query: 363 RSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLC 422
+ D +LK+ + K LKV+ N AFS ++ S + C
Sbjct: 231 ATLDSTLKLSNYATGKF-LKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDN--------C 281
Query: 423 FY--DREKLELVSRV-GISPACSVVQCAWHPKLNQIFATAGD 461
Y D + ++ R+ G + A V C HP N+I +++G+
Sbjct: 282 VYLWDLQARNILQRLEGHTDAVISVSC--HPVQNEI-SSSGN 320
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 35/113 (30%), Positives = 53/113 (46%)
Query: 298 GRVAVTTCA-WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSD 356
G A +C + DG +A D ++ +W+ + IH +GHS I+ L +SSD
Sbjct: 41 GHTAAISCVKFSNDGNLLASASVDKTMILWSAT----NYSLIHRYEGHSSGISDLAWSSD 96
Query: 357 GRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
S S D +L++WD R E LKV N N F+P L ++G+
Sbjct: 97 SHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVN--FNPPSNLIVSGS 147
Score = 66 (28.3 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 21/82 (25%), Positives = 37/82 (45%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNL 202
L+GHT +S + + G+ + S S D T+ ++ N L + EGH + +L
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILWS--ATNYSL-----IHRYEGHSSGISDL 91
Query: 203 SWSPTSDRFLCVTGSAQAKIYD 224
+WS S + +I+D
Sbjct: 92 AWSSDSHYTCSASDDCTLRIWD 113
>DICTYBASE|DDB_G0268084 [details] [associations]
symbol:wdr91 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0268084
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AAFI02000003
RefSeq:XP_647541.1 ProteinModelPortal:Q55FJ2
EnsemblProtists:DDB0233074 GeneID:8616348 KEGG:ddi:DDB_G0268084
OMA:MKQQLQF Uniprot:Q55FJ2
Length = 766
Score = 167 (63.8 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 54/217 (24%), Positives = 107/217 (49%)
Query: 198 QVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIR-DLKNTKGHICGLTCG 256
+V +L W S LC T ++ KI++ +L + GD+ + + C
Sbjct: 507 EVASLEWENRSKLLLCGTIDSKIKIWN----SLTDKAIGDINTSIEFPRVEDIACNPNGN 562
Query: 257 EWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAG 316
+ +I DG + W++ K+++ KL+ G V + + +++ G ++
Sbjct: 563 SF---ATSSINNGRTDGVVYTWNLRTLKTEE-----KLSSSGAV-INSMSFNSTGTLLST 613
Query: 317 GIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRK 376
G DG+I+++++K G P I + HS++I +++FSSD L S DG L W++
Sbjct: 614 GCVDGTIRIFDIKSG---SP-IAGWQAHSNEILSVQFSSDENRLYSLGKDGKLYQWNIHS 669
Query: 377 MKEPLKVFED---LPNNYAQTNVAFSPDEQLFLTGTS 410
M +P+K ++ L + + T ++F+ ++ FL GT+
Sbjct: 670 MGKPVKEYDYPGFLVDPHRTTKISFNHNQSSFLVGTN 706
>WB|WBGene00008419 [details] [associations]
symbol:wdr-23 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0080135 "regulation of
cellular response to stress" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0040018 GO:GO:0000122 KO:K11801
InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:Z73906 PIR:T20359
PIR:T20360 RefSeq:NP_492124.1 RefSeq:NP_492125.1
ProteinModelPortal:P90794 SMR:P90794 DIP:DIP-26027N
MINT:MINT-1089361 STRING:P90794 EnsemblMetazoa:D2030.9a.1
EnsemblMetazoa:D2030.9a.2 EnsemblMetazoa:D2030.9a.3 GeneID:172518
KEGG:cel:CELE_D2030.9 CTD:172518 WormBase:D2030.9a
WormBase:D2030.9b GeneTree:ENSGT00700000104507 InParanoid:P90794
OMA:FADETGH NextBio:875863 ArrayExpress:P90794 GO:GO:0080135
Uniprot:P90794
Length = 571
Score = 158 (60.7 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 63/252 (25%), Positives = 111/252 (44%)
Query: 133 NRHQIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLE 192
N H +P V + TK + + G++++ S D +R Y S+ +S +
Sbjct: 150 NSH-LPNQKRRVDRVATKSFCTQYIQN-GTKIVVASQDEKIRFYQRNPDKSKYRS--KYM 205
Query: 193 PSEGHQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLG--EFVKGD---MYIRDLKNTK 247
S+ +V WS D + + G A +D + +G +F + + DL
Sbjct: 206 KSDELRVDQCGWS-ILDTAISLNGDLIAYGTWKDAVFVGKLDFTERQNITWFPIDLNGEP 264
Query: 248 GHI-CGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
G C + C ++ +++ + +S+ S+ ++DV + + + ++ A V + C
Sbjct: 265 GRDHCAVFCVKFSDSSEQIVCGTSQY-SIHVFDVEQRRRIRTIVN---AHEDDVN-SVCF 319
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGW--GSRPDIHVEKGHSDDITALKFSSDGRILLSRS 364
D I DG ++VW+ K W G + V GH D +T + D R LLS S
Sbjct: 320 ADLGSNLIYSAGDDGLVKVWD-KRAWSDGDVEPVGVFAGHRDGVTHVDSRQDERYLLSNS 378
Query: 365 FDGSLKVWDLRK 376
D ++KVWDLRK
Sbjct: 379 KDQTIKVWDLRK 390
Score = 53 (23.7 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 443 VVQCAWHPKLNQIFATAGD 461
V +C WHP N+I ++A D
Sbjct: 487 VRECDWHPTENEIVSSAWD 505
>UNIPROTKB|P90794 [details] [associations]
symbol:wdr-23 "DDB1- and CUL4-associated factor 11 homolog"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0018991
GO:GO:0040010 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0040018 GO:GO:0000122
KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:Z73906
PIR:T20359 PIR:T20360 RefSeq:NP_492124.1 RefSeq:NP_492125.1
ProteinModelPortal:P90794 SMR:P90794 DIP:DIP-26027N
MINT:MINT-1089361 STRING:P90794 EnsemblMetazoa:D2030.9a.1
EnsemblMetazoa:D2030.9a.2 EnsemblMetazoa:D2030.9a.3 GeneID:172518
KEGG:cel:CELE_D2030.9 CTD:172518 WormBase:D2030.9a
WormBase:D2030.9b GeneTree:ENSGT00700000104507 InParanoid:P90794
OMA:FADETGH NextBio:875863 ArrayExpress:P90794 GO:GO:0080135
Uniprot:P90794
Length = 571
Score = 158 (60.7 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 63/252 (25%), Positives = 111/252 (44%)
Query: 133 NRHQIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLE 192
N H +P V + TK + + G++++ S D +R Y S+ +S +
Sbjct: 150 NSH-LPNQKRRVDRVATKSFCTQYIQN-GTKIVVASQDEKIRFYQRNPDKSKYRS--KYM 205
Query: 193 PSEGHQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLG--EFVKGD---MYIRDLKNTK 247
S+ +V WS D + + G A +D + +G +F + + DL
Sbjct: 206 KSDELRVDQCGWS-ILDTAISLNGDLIAYGTWKDAVFVGKLDFTERQNITWFPIDLNGEP 264
Query: 248 GHI-CGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
G C + C ++ +++ + +S+ S+ ++DV + + + ++ A V + C
Sbjct: 265 GRDHCAVFCVKFSDSSEQIVCGTSQY-SIHVFDVEQRRRIRTIVN---AHEDDVN-SVCF 319
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGW--GSRPDIHVEKGHSDDITALKFSSDGRILLSRS 364
D I DG ++VW+ K W G + V GH D +T + D R LLS S
Sbjct: 320 ADLGSNLIYSAGDDGLVKVWD-KRAWSDGDVEPVGVFAGHRDGVTHVDSRQDERYLLSNS 378
Query: 365 FDGSLKVWDLRK 376
D ++KVWDLRK
Sbjct: 379 KDQTIKVWDLRK 390
Score = 53 (23.7 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 443 VVQCAWHPKLNQIFATAGD 461
V +C WHP N+I ++A D
Sbjct: 487 VRECDWHPTENEIVSSAWD 505
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 39/159 (24%), Positives = 76/159 (47%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+ K +L++S+D ++ +WD++ + +++ K G AV AW + + G
Sbjct: 183 WNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFG 242
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+ D + +W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDL
Sbjct: 243 SVADDQKLMIWDTRSNTTSKPS-HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 301
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R +K L FE + Q V +SP + L + +R
Sbjct: 302 RNLKLKLHSFESHKDEIFQ--VHWSPHNETILASSGTDR 338
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 59/271 (21%), Positives = 121/271 (44%)
Query: 151 IVSALAVDHSGSRVLSGSYDYTVRMYD-FQGMNSRLQSFRQLEPSEGHQVRNLSWSPTSD 209
+V+ + + + ++ + YD + F ++ ++++ ++ EG +V + P +
Sbjct: 79 VVARVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKIN-HEG-EVNRARYMPQNP 136
Query: 210 RFLCV-TGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHI---CGLTCGEWHPKTKET 265
+ T SA ++D GD DL+ +GH GL+ W+
Sbjct: 137 CIIATKTPSADVLVFDYTKHPSKPDPSGDCS-PDLR-LRGHQKEGYGLS---WNSNLSGH 191
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAGGIGDGS-I 323
+L++S+D ++ +WD++ + +V+ K G AV AW + + G + D +
Sbjct: 192 LLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 324 QVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDLRKMKEPLK 382
+W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDLR +K L
Sbjct: 252 MIWDTRSNTTSKPS-HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH 310
Query: 383 VFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
FE + Q V +SP + L + +R
Sbjct: 311 SFESHKDEIFQ--VHWSPHNETILASSGTDR 339
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 173 (66.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 50/180 (27%), Positives = 92/180 (51%)
Query: 263 KETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCD--GKCIAGGIGD 320
+E I+ S+ GS+R+WD+ K +++ + + C+ D G+ +A G D
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAK----ILRTLMGHKANI----CSLDFHPYGEFVASGSQD 126
Query: 321 GSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEP 380
+I++W+++ + + +GHS + L+FS DG+ L S + D ++K+WDL K
Sbjct: 127 TNIKLWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK-- 180
Query: 381 LKVFEDLPNNYAQTNVA-FSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGISP 439
+ + P + NV F P+E L +G+S + T + F+D EK ++VS + P
Sbjct: 181 --MMSEFPGHTGPVNVVEFHPNEYLLASGSS---DRT----IRFWDLEKFQVVSCIEGEP 231
Score = 38 (18.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 526 KDPIKSHKPEV-PVTGP 541
+DP++ H+P P+ P
Sbjct: 313 RDPVQDHRPLAQPLPNP 329
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 130 (50.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 302 VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
V C + D K + G D +++VWN+K ++ ++ KGHS I F+ D + ++
Sbjct: 1959 VNFCTFSPDSKKLVSGGWDFNLRVWNIK----TQKELLCLKGHSSSIEKAFFTKDQKYII 2014
Query: 362 SRSFDGSLKVWD 373
S SFDGS+KVWD
Sbjct: 2015 SASFDGSVKVWD 2026
Score = 95 (38.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 32/148 (21%), Positives = 70/148 (47%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLS 203
V+ H+K V+ ++ + G+ +++GS D T +++ + ++L +F L P + L+
Sbjct: 1735 VMGNHSKSVNHCSLSNDGNYIVTGSDDATAKVWS-STLGTQLTNF--LIPGDCW-ANCLA 1790
Query: 204 WSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
+SPT +++D V + R++ GH +T + P +
Sbjct: 1791 FSPTQPLLAVGATDCTVRLFD---------VSSNTIYREVAKLHGHTRAITSITFSP-SG 1840
Query: 264 ETILTSSEDGSLRIWDVNEFKSQKQVIK 291
I ++SED +++W+V K++ + K
Sbjct: 1841 NLIASTSEDLLIKVWNVQTHKAEYTIEK 1868
Score = 79 (32.9 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 39/178 (21%), Positives = 75/178 (42%)
Query: 140 SNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQV 199
S + L GH+ +S + G + S S+D TV ++D + +++ F+ V
Sbjct: 1555 SELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVIVWDLI-VGNQIHQFKD----HSRAV 1609
Query: 200 RNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWH 259
+SPT++ L + +D + K R+ ++ C W
Sbjct: 1610 NYCEFSPTANNLL------MSCAWDSSIIIFNTSDKN--IFRNFRSAHSKPVNSCC--WS 1659
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQ---KQVIKPKLARPGRVAVTTCAWDCDGKCI 314
P I +SS DG+++IW+ + ++ K VI L+ G ++ +C + + K I
Sbjct: 1660 PDGT-LIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSY-G--SIKSCKFSANSKQI 1713
Score = 71 (30.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 16/82 (19%), Positives = 41/82 (50%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSW 204
L GHT+ ++++ SG+ + S S D +++++ Q + +E + + +S+
Sbjct: 1824 LHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYT----IEKAHNDPINCISF 1879
Query: 205 SPTSD-RFLCVTGSAQAKIYDR 225
+PT++ + + K++ R
Sbjct: 1880 NPTNECELISCSDDYSTKVWSR 1901
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 173 (66.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 50/180 (27%), Positives = 92/180 (51%)
Query: 263 KETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCD--GKCIAGGIGD 320
+E I+ S+ GS+R+WD+ K +++ + + C+ D G+ +A G D
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAK----ILRTLMGHKANI----CSLDFHPYGEFVASGSQD 126
Query: 321 GSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEP 380
+I++W+++ + + +GHS + L+FS DG+ L S + D ++K+WDL K
Sbjct: 127 TNIKLWDIR----RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK-- 180
Query: 381 LKVFEDLPNNYAQTNVA-FSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGISP 439
+ + P + NV F P+E L +G+S + T + F+D EK ++VS + P
Sbjct: 181 --MMSEFPGHTGPVNVVEFHPNEYLLASGSS---DRT----IRFWDLEKFQVVSCIEGEP 231
Score = 37 (18.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 592 YIAPAYAQTQPAPVFQESDSE 612
Y P+ A ++P V Q S+SE
Sbjct: 337 YERPSTACSKPQRVKQNSESE 357
>UNIPROTKB|Q08E38 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9913
"Bos taurus" [GO:0000974 "Prp19 complex" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005819 "spindle" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0048711 "positive regulation of astrocyte differentiation"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV EMBL:BC123437
IPI:IPI00702434 RefSeq:NP_001069108.1 UniGene:Bt.62928
ProteinModelPortal:Q08E38 STRING:Q08E38 PRIDE:Q08E38
Ensembl:ENSBTAT00000019100 GeneID:513868 KEGG:bta:513868 CTD:27339
HOVERGEN:HBG053697 InParanoid:Q08E38 OrthoDB:EOG4V6ZGG
NextBio:20871070 Uniprot:Q08E38
Length = 504
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 51/168 (30%), Positives = 83/168 (49%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+ H +T H T + +L+SS+D + W ++ ++ + + K G TCA
Sbjct: 303 RAHESAVTGLSLHA-TGDYLLSSSDD---QYWAFSDIQTGRVLTKVTDETSG--CSLTCA 356
Query: 307 -WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSF 365
+ DG G D I++W+LK R ++ GHS IT++ FS +G L + +
Sbjct: 357 QFHPDGLIFGTGTMDSQIKIWDLK----ERTNVANFPGHSGPITSIAFSENGYYLATAAD 412
Query: 366 DGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPD-EQLFLTGTSVE 412
D S+K+WDLRK+K K + L NN+ ++ F L L GT V+
Sbjct: 413 DSSVKLWDLRKLKN-FKTLQ-LDNNFEVKSLIFDQSGTYLALGGTDVQ 458
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 51/168 (30%), Positives = 83/168 (49%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+ H +T H T + +L+SS+D + W ++ ++ + + K G TCA
Sbjct: 303 RAHESAVTGLSLHA-TGDYLLSSSDD---QYWAFSDIQTGRVLTKVTDETSG--CSLTCA 356
Query: 307 -WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSF 365
+ DG G D I++W+LK R ++ GHS IT++ FS +G L + +
Sbjct: 357 QFHPDGLIFGTGTMDSQIKIWDLK----ERTNVANFPGHSGPITSIAFSENGYYLATAAD 412
Query: 366 DGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPD-EQLFLTGTSVE 412
D S+K+WDLRK+K K + L NN+ ++ F L L GT V+
Sbjct: 413 DSSVKLWDLRKLKN-FKTLQ-LDNNFEVKSLIFDQSGTYLALGGTDVQ 458
>UNIPROTKB|B2CCY7 [details] [associations]
symbol:PRPF19 "Nuclear matrix protein 200" species:9823
"Sus scrofa" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0008610 "lipid biosynthetic
process" evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0001833 "inner cell mass cell proliferation" evidence=IEA]
[GO:0000974 "Prp19 complex" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR000772 PROSITE:PS50231 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:CU861565
EMBL:EU417752 EMBL:AB282747 RefSeq:NP_001121929.1 UniGene:Ssc.44045
STRING:B2CCY7 Ensembl:ENSSSCT00000014327 GeneID:100144769
KEGG:ssc:100144769 Uniprot:B2CCY7
Length = 504
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 51/168 (30%), Positives = 83/168 (49%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+ H +T H T + +L+SS+D + W ++ ++ + + K G TCA
Sbjct: 303 RAHESAVTGLSLHA-TGDYLLSSSDD---QYWAFSDIQTGRVLTKVTDETSG--CSLTCA 356
Query: 307 -WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSF 365
+ DG G D I++W+LK R ++ GHS IT++ FS +G L + +
Sbjct: 357 QFHPDGLIFGTGTMDSQIKIWDLK----ERTNVANFPGHSGPITSIAFSENGYYLATAAD 412
Query: 366 DGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPD-EQLFLTGTSVE 412
D S+K+WDLRK+K K + L NN+ ++ F L L GT V+
Sbjct: 413 DSSVKLWDLRKLKN-FKTLQ-LDNNFEVKSLIFDQSGTYLALGGTDVQ 458
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 51/168 (30%), Positives = 83/168 (49%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+ H +T H T + +L+SS+D + W ++ ++ + + K G TCA
Sbjct: 303 RAHESAVTGLSLHA-TGDYLLSSSDD---QYWAFSDIQTGRVLTKVTDETSG--CSLTCA 356
Query: 307 -WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSF 365
+ DG G D I++W+LK R ++ GHS IT++ FS +G L + +
Sbjct: 357 QFHPDGLIFGTGTMDSQIKIWDLK----ERTNVANFPGHSGPITSIAFSENGYYLATAAD 412
Query: 366 DGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPD-EQLFLTGTSVE 412
D S+K+WDLRK+K K + L NN+ ++ F L L GT V+
Sbjct: 413 DSSVKLWDLRKLKN-FKTLQ-LDNNFEVKSLIFDQSGTYLALGGTDVQ 458
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 51/168 (30%), Positives = 83/168 (49%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+ H +T H T + +L+SS+D + W ++ ++ + + K G TCA
Sbjct: 303 RAHESAVTGLSLHA-TGDYLLSSSDD---QYWAFSDIQTGRVLTKVTDETSG--CSLTCA 356
Query: 307 -WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSF 365
+ DG G D I++W+LK R ++ GHS IT++ FS +G L + +
Sbjct: 357 QFHPDGLIFGTGTMDSQIKIWDLK----ERTNVANFPGHSGPITSIAFSENGYYLATAAD 412
Query: 366 DGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPD-EQLFLTGTSVE 412
D S+K+WDLRK+K K + L NN+ ++ F L L GT V+
Sbjct: 413 DSSVKLWDLRKLKN-FKTLQ-LDNNFEVKSLIFDQSGTYLALGGTDVQ 458
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 51/168 (30%), Positives = 83/168 (49%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+ H +T H T + +L+SS+D + W ++ ++ + + K G TCA
Sbjct: 303 RAHESAVTGLSLHA-TGDYLLSSSDD---QYWAFSDIQTGRVLTKVTDETSG--CSLTCA 356
Query: 307 -WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSF 365
+ DG G D I++W+LK R ++ GHS IT++ FS +G L + +
Sbjct: 357 QFHPDGLIFGTGTMDSQIKIWDLK----ERTNVANFPGHSGPITSIAFSENGYYLATAAD 412
Query: 366 DGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPD-EQLFLTGTSVE 412
D S+K+WDLRK+K K + L NN+ ++ F L L GT V+
Sbjct: 413 DSSVKLWDLRKLKN-FKTLQ-LDNNFEVKSLIFDQSGTYLALGGTDVQ 458
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 159 (61.0 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 39/129 (30%), Positives = 68/129 (52%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH+ + C ++HP + + T S D ++R+W + S + L R V + ++
Sbjct: 424 GHLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGNSVR------LFTGHRGPVLSLSF 476
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVE-KGHSDDITALKFSSDGRILLSRSFD 366
+GK +A D +++W+L G + E +GH+D IT+L FS D ++ S S D
Sbjct: 477 SPNGKYLASAGEDQRLKLWDLASG-----TLFKELRGHTDSITSLAFSPDSGLIASASMD 531
Query: 367 GSLKVWDLR 375
S++VWD+R
Sbjct: 532 NSVRVWDIR 540
Score = 50 (22.7 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 140 SNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDF 178
+N ++ +GH V + + SGS+D T R++ F
Sbjct: 375 TNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSF 413
Score = 46 (21.3 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 23/85 (27%), Positives = 37/85 (43%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
+L+GH V + S +LS S D ++R +D L SF +GH V +
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWD-------LGSFTNTVLYQGHAYPVWD 389
Query: 202 LSWSPTSDRFLCVTGSAQAKIYDRD 226
+ SP S F + A+++ D
Sbjct: 390 VDISPFSLYFASGSHDRTARLWSFD 414
>UNIPROTKB|E2R8L3 [details] [associations]
symbol:PRPF19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 InterPro:IPR013915
Pfam:PF08606 OMA:QWQELKV EMBL:AAEX03011680 EMBL:AAEX03011681
Ensembl:ENSCAFT00000026060 Uniprot:E2R8L3
Length = 513
Score = 162 (62.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 51/168 (30%), Positives = 83/168 (49%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+ H +T H T + +L+SS+D + W ++ ++ + + K G TCA
Sbjct: 312 RAHESAVTGLSLHA-TGDYLLSSSDD---QYWAFSDIQTGRVLTKVTDETSG--CSLTCA 365
Query: 307 -WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSF 365
+ DG G D I++W+LK R ++ GHS IT++ FS +G L + +
Sbjct: 366 QFHPDGLIFGTGTMDSQIKIWDLK----ERTNVANFPGHSGPITSIAFSENGYYLATAAD 421
Query: 366 DGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPD-EQLFLTGTSVE 412
D S+K+WDLRK+K K + L NN+ ++ F L L GT V+
Sbjct: 422 DSSVKLWDLRKLKN-FKTLQ-LDNNFEVKSLIFDQSGTYLALGGTDVQ 467
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 160 (61.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 61/243 (25%), Positives = 105/243 (43%)
Query: 178 FQGMNSRLQ-SFRQLEPSEGHQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKG 236
F +N +++ R E ++ R + PT + T S A +Y D T V
Sbjct: 104 FGAVNGKVEPDIRINHEGEVNRARYMPQKPT----IIATKSPSADVYIFD-YTKYPSVPK 158
Query: 237 DMYIRDLKNTKGHI---CGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPK 293
D L KGH GL+ W+P + IL++S+D ++ WD+N +K +
Sbjct: 159 DNTFNPLLKLKGHTKEGYGLS---WNPNKEGLILSASDDQTVCHWDINGNAGANGELKAR 215
Query: 294 LARPGRVAVTT-CAWDCDGKCIAGGIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITAL 351
G +V AW + G +GD + +W+L+ + P H HS ++ L
Sbjct: 216 EIFKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDLRT---NVPG-HAIDAHSAEVNCL 271
Query: 352 KFSSDGRILLSR-SFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTS 410
F+ +L+ S D ++ +WDLR ++ L FE + Q V +SP + L +
Sbjct: 272 AFNPYSEFILATGSADKTVALWDLRNLRLKLHSFESHRDEIFQ--VQWSPHNETILASSG 329
Query: 411 VER 413
++
Sbjct: 330 TDK 332
Score = 117 (46.2 bits), Expect = 0.00099, P = 0.00099
Identities = 53/199 (26%), Positives = 84/199 (42%)
Query: 187 SFRQLEPSEGHQVRN--LSWSPTSDRFLCVTGSAQAKIY-DRDGLTLGEFVKGDMYIRDL 243
+F L +GH LSW+P + + Q + D +G G G++ R++
Sbjct: 161 TFNPLLKLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDING-NAG--ANGELKAREI 217
Query: 244 KNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVT 303
KGH + WH + +D L IWD+ + V P A A
Sbjct: 218 --FKGHESVVEDVAWHVLHDGVFGSVGDDKKLLIWDL-----RTNV--PGHAIDAHSAEV 268
Query: 304 TC-AWDCDGKCI-AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGR-IL 360
C A++ + I A G D ++ +W+L+ R +H + H D+I +++S IL
Sbjct: 269 NCLAFNPYSEFILATGSADKTVALWDLR---NLRLKLHSFESHRDEIFQVQWSPHNETIL 325
Query: 361 LSRSFDGSLKVWDLRKMKE 379
S D L VWDL K+ E
Sbjct: 326 ASSGTDKRLHVWDLSKIGE 344
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 59/271 (21%), Positives = 121/271 (44%)
Query: 151 IVSALAVDHSGSRVLSGSYDYTVRMYD-FQGMNSRLQSFRQLEPSEGHQVRNLSWSPTSD 209
+V+ + V + ++ + YD + F ++ ++++ ++ EG +V + P +
Sbjct: 79 VVARVQVPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKIN-HEG-EVNRARYMPQNP 136
Query: 210 RFLCV-TGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHI---CGLTCGEWHPKTKET 265
+ T SA ++D G+ DL+ +GH GL+ W+
Sbjct: 137 CIIATKTPSADVLVFDYTKHPSKPDPSGECS-PDLR-LRGHQKEGYGLS---WNSNLSGH 191
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAGGIGDGS-I 323
+L++S+D ++ +WD++ + +V+ K G AV AW + + G + D +
Sbjct: 192 LLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKL 251
Query: 324 QVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDLRKMKEPLK 382
+W+ + S+P H H+ ++ L F+ +L+ S D ++ +WDLR +K L
Sbjct: 252 MIWDTRSNTTSKPS-HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH 310
Query: 383 VFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
FE + Q V +SP + L + +R
Sbjct: 311 SFESHKDEIFQ--VHWSPHNETILASSGTDR 339
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 163 (62.4 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 62/237 (26%), Positives = 110/237 (46%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGH--QVRN 201
VL+GHT IV L G + +G+ D TVR+++ +N ++ + GH V
Sbjct: 359 VLEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWN---LNIEDNVYKCIHVFTGHTASVTA 415
Query: 202 LSWSPTS----DRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGE 257
++ P FL S+Q + R L + K D R + K H + +
Sbjct: 416 VALGPLDVNGYPTFLA--SSSQDRTLKRFNLG-SQLNKSDFSNRAVWTIKAHDRDVNAIQ 472
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGG 317
K I ++S+D ++++WD S +V+ + R R V C+++ + +A G
Sbjct: 473 VS-KDGRIIASASQDKTIKLWD----SSTGEVVG--VLRGHRRGVWACSFNPFSRQLASG 525
Query: 318 IGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
GD +I++WN+ ++ + +GH+ I L + S G ++S + DG +KVW L
Sbjct: 526 SGDRTIRIWNVD----TQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSL 578
Score = 110 (43.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 47/190 (24%), Positives = 83/190 (43%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+GH G+ ++P +++ + + S D ++RIW+V+ +Q ++ G A+
Sbjct: 504 RGHRRGVWACSFNPFSRQ-LASGSGDRTIRIWNVDT----QQCVQTLEGHTG--AILKLI 556
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFD 366
+ G + DG ++VW+L G + H D + AL DG +L+S D
Sbjct: 557 YISQGTQVVSAAADGLVKVWSLSSG----ECVATLDNHEDRVWALASRFDGSLLVSGGAD 612
Query: 367 GSLKVWD------LRKMKEPLK---VFEDLPNNYAQTNVAFSPD-EQLFLTGTSVEREST 416
+ VW + K E L+ E L +N+ QT D +Q S++R
Sbjct: 613 AVVSVWKDVTEEYIAKQAEELERRVEAEQLLSNFEQTE-----DWQQAIALALSLDRPH- 666
Query: 417 TGGLLCFYDR 426
GLL ++R
Sbjct: 667 --GLLRLFER 674
Score = 72 (30.4 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQ 179
V +GH+ ++ L + +GS +LSGS D TV++++ +
Sbjct: 184 VFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIK 219
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 160 (61.4 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 55/203 (27%), Positives = 91/203 (44%)
Query: 183 SRLQSFRQLEPSEGHQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLT-LGEFVKGDMYIR 241
S+ S ++ SEG+ L WSP +TG D DGL + +G ++
Sbjct: 245 SKPLSTLRMHKSEGYA---LDWSPLHPLGKLLTG-------DNDGLIYVTTRTEGGGWVT 294
Query: 242 DLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
D + +GH + +W P K ++S DG++++WDV KS+ + K++ V
Sbjct: 295 DTRAFRGHASSVEELQWSPNEKNVFASASSDGTVKVWDVRS-KSRSPAVNVKISNTD-VN 352
Query: 302 VTTCAWDCD-GKCIAGGIGDGSIQVWNL---KPGWGSRPDIHVE-----KGHSDDITALK 352
V T W +A G DG VW+L KP S I H + IT+++
Sbjct: 353 VMT--WSKQTSHLLATGADDGQWAVWDLRHWKPNPSSSAPITASPVASFNFHKEPITSIE 410
Query: 353 FS-SDGRILLSRSFDGSLKVWDL 374
+ +D ++ S D ++ +WDL
Sbjct: 411 WHPTDDSVIAVGSADNTVTLWDL 433
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 156 (60.0 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 64/279 (22%), Positives = 126/279 (45%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRN 201
E LKGHT V ++ DHSG + S S D T++++DFQG + R + + H V +
Sbjct: 78 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF----ECIRTMHGHD-HNVSS 132
Query: 202 LSWSPTSDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLK-NTKGHICGLTCGEWH 259
++ P D + + K+++ + G + F ++R ++ N G + +C +
Sbjct: 133 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA-SCS--N 189
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIK--PKLARPGRVAVTTCAWDCDGK---CI 314
+T + ++++ ++ E + + I P+ + T GK +
Sbjct: 190 DQTVRVWVVATKECKA---ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 246
Query: 315 AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
G D +I++W++ G + GH + + + F S G+ +LS + D +L+VWD
Sbjct: 247 LSGSRDKTIKMWDVSTGMCLMTLV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
K K +K + + T++ F +TG SV++
Sbjct: 303 -KNKRCMKTLN--AHEHFVTSLDFHKTAPYVVTG-SVDQ 337
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 159 (61.0 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 48/146 (32%), Positives = 76/146 (52%)
Query: 264 ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSI 323
E ++++S+D L +WD KS K + K + V ++ DG+CIA D S+
Sbjct: 359 ERLVSASDDLQLILWDPQ--KSTKPITK---MHGHQKVVNHASFSPDGRCIATASFDSSV 413
Query: 324 QVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKV 383
++W+ K G + +GH + +S+D R+L+S S D +LKVWD+R K +K
Sbjct: 414 RLWDGKTG----KFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKK--MKF 467
Query: 384 FEDLPNNYAQT-NVAFSPDEQLFLTG 408
DLP + Q V +SPD Q +G
Sbjct: 468 --DLPGHEDQVFAVDWSPDGQRVASG 491
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 57/231 (24%), Positives = 103/231 (44%)
Query: 156 AVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPS-EGHQ--VRNLSWSP-TSDRF 211
+V H+G L + D+ +Y Q + R+++ + S GH + + +SP TS R
Sbjct: 95 SVFHNG---LMKTEDHLTLLYTPQAV-FRVRAVTRCTASMNGHDGTIISAQFSPSTSSRL 150
Query: 212 LCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSE 271
+ +G A+++D D T + KGH ++C W P I T S
Sbjct: 151 VTGSGDFTARLWDCDTQT------------PIATMKGHTNWVSCVAWAPDAS-IIATGSM 197
Query: 272 DGSLRIWDVNEFK----SQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWN 327
D ++R WD + + ++ KP +A + A D +A G D ++++WN
Sbjct: 198 DNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPL--HLAPDSGPYLLASGSKDNTVRIWN 255
Query: 328 LKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMK 378
+K R + GH+ IT +++ I S S+D ++++WD + K
Sbjct: 256 VK----LRTLLFTLSGHTAPITCVRWGGQNWIY-SSSYDKTIRIWDAKDGK 301
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 61/251 (24%), Positives = 108/251 (43%)
Query: 145 LKGHTKIVSALAVDHSGSR-VLSGSYDYTVRMYDFQG------MNSRLQSFRQLEPSEGH 197
L GHT ++ V G + S SYD T+R++D + + L S H
Sbjct: 265 LSGHTAPITC--VRWGGQNWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEH 322
Query: 198 QVRNLSWSPT-------SD-------RF-LCVTGSAQAKIYDRDGLTLGEFVKGDMYIRD 242
+R+ ++ T SD R+ C+ S + + D L L + +
Sbjct: 323 VLRSGAYDHTDFKPKSFSDERRKAKERYEACLKQSGERLVSASDDLQLILW-DPQKSTKP 381
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA- 301
+ GH + + P + I T+S D S+R+WD K+ K + + G VA
Sbjct: 382 ITKMHGHQKVVNHASFSPDGR-CIATASFDSSVRLWDG---KTGKFLATLR----GHVAA 433
Query: 302 VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
V CAW D + + D +++VW+++ + D+ GH D + A+ +S DG+ +
Sbjct: 434 VYQCAWSTDSRLLVSSSQDTTLKVWDVRSK-KMKFDL---PGHEDQVFAVDWSPDGQRVA 489
Query: 362 SRSFDGSLKVW 372
S D ++++W
Sbjct: 490 SGGADKAVRIW 500
>FB|FBgn0264691 [details] [associations]
symbol:Lst8 species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0031929 "TOR
signaling cascade" evidence=IPI] [GO:0045793 "positive regulation
of cell size" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031929 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045793
KO:K08266 GeneTree:ENSGT00390000014795 OMA:NNKGNCY EMBL:AY061311
RefSeq:NP_572572.1 UniGene:Dm.12479 ProteinModelPortal:Q9W328
SMR:Q9W328 IntAct:Q9W328 MINT:MINT-888627 STRING:Q9W328
PaxDb:Q9W328 EnsemblMetazoa:FBtr0071368 GeneID:31903
KEGG:dme:Dmel_CG3004 UCSC:CG3004-RA FlyBase:FBgn0030142
InParanoid:Q9W328 OrthoDB:EOG473N6W PhylomeDB:Q9W328
GenomeRNAi:31903 NextBio:775850 Bgee:Q9W328 Uniprot:Q9W328
Length = 313
Score = 133 (51.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 46/156 (29%), Positives = 73/156 (46%)
Query: 259 HPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGI 318
HP E I S++GS+ +WDV + ++ I P++ ++ A DG+ +A
Sbjct: 132 HPNQVE-IAMGSQNGSVFLWDVKSERHER--IVPEVD----ASIQDVAISPDGRYLAAAN 184
Query: 319 GDGSIQVWNLKPGWGS----RPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
G+ +W+L RP+ + HS I KFS D R+LL+ S DG++ +W
Sbjct: 185 NKGNCYIWSLTSQDQKMSTLRPNRKIP-AHSRYILRCKFSPDSRLLLTTSGDGTVCIW-- 241
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTS 410
K + K E NY + AFS D + T +S
Sbjct: 242 -KTDDFSKWRELCIENYWVWDAAFSADSKWLFTASS 276
Score = 65 (27.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 28/115 (24%), Positives = 50/115 (43%)
Query: 166 SGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSWSPTSDRFLCVTGSAQAKIYDR 225
+G YD+T++++ N +++ R +E S QV L +P R L G ++YD
Sbjct: 11 TGGYDHTIKVWQAHTGNC-IKTMRFVETS---QVNALDRTPDKTR-LAACGYQCIRLYDL 65
Query: 226 DGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDV 280
+ + D +++ G G W + T+ ED +RIWD+
Sbjct: 66 ESNCTAPVINFDGVQKNVTRL-GF---QEDGNW-------MFTAGEDHHVRIWDM 109
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 137 (53.3 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 42/145 (28%), Positives = 75/145 (51%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQV 325
+ T S G + I+ V K + L G+ + + A+ DGK +A G DG I +
Sbjct: 121 LATGSHVGKVNIFGVETGKKEYS-----LDTRGKF-ILSIAYSPDGKYLASGAIDGIINI 174
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFE 385
+++ G +H +GH+ I +L FS+D ++L++ S DG +K++D++ L
Sbjct: 175 FDIATG----KLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHAS--LAATL 228
Query: 386 DLPNNYAQTNVAFSPDEQLFLTGTS 410
++ NVAFSPD+ F++ +S
Sbjct: 229 SGHGSWV-LNVAFSPDDAHFVSSSS 252
Score = 60 (26.2 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 22/78 (28%), Positives = 38/78 (48%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSW 204
L+GH V ++ V SG+ + S S D +R++D + +++S P + V ++
Sbjct: 60 LEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLES-GKQIRSI-DAGPVDAWSV---AF 114
Query: 205 SPTSDRFLCVTGSAQAKI 222
SP S TGS K+
Sbjct: 115 SPDSQHL--ATGSHVGKV 130
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 160 (61.4 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 43/163 (26%), Positives = 85/163 (52%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH + C +++ ++E ++ S GSLR+WD+ K +++ + + ++++ +
Sbjct: 61 GHTSAVGCIQFN-SSEERVVAGSLSGSLRLWDLEAAK----ILRTLMGH--KASISSLDF 113
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDG 367
G+ +A G D +I++W+++ + + KGH+ + L FS DG+ L S S D
Sbjct: 114 HPMGEYLASGSVDSNIKLWDVR----RKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDS 169
Query: 368 SLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTS 410
++K+WDL K + E + A V F P+E L +G++
Sbjct: 170 TVKLWDLIAGK---MITEFTSHTSAVNVVQFHPNEYLLASGSA 209
Score = 131 (51.2 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 41/168 (24%), Positives = 76/168 (45%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
L+ GH ++ ++HP E + + S D ++++WDV + + V + K G
Sbjct: 98 LRTLMGHKASISSLDFHPMG-EYLASGSVDSNIKLWDV---RRKGCVFRYK----GHTQA 149
Query: 303 TTC-AWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
C A+ DGK +A D ++++W+L G I H+ + ++F + +L
Sbjct: 150 VRCLAFSPDGKWLASASDDSTVKLWDLIAG----KMITEFTSHTSAVNVVQFHPNEYLLA 205
Query: 362 SRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
S S D ++K+WDL K + +V F+PD +G+
Sbjct: 206 SGSADRTVKLWDLEKFN---MIGSSEGETGVVRSVLFNPDGSCLYSGS 250
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 136 (52.9 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 51/169 (30%), Positives = 80/169 (47%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTC-A 306
GH + ++ P T +++ T S D ++ IWD+ S V L G +C
Sbjct: 150 GHCDSIQSSDFSP-TSDSLATGSWDSTVHIWDLRA--STPVVSYHNLE--GHTGNISCLC 204
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFD 366
+ G +A G D +I VW KP + P + + KGH+ + +L FS D L S +
Sbjct: 205 YSASG-LLASGSWDKTICVW--KPTTNNLP-LQL-KGHTIWVNSLAFSPDELKLASAGYS 259
Query: 367 GSLKVWDLR--KMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
++KVWD K E LK D+ A + F+PD +L ++G +V R
Sbjct: 260 RTVKVWDCLTGKCLETLKGMLDV----AHACI-FTPDGKLLVSGAAVTR 303
Score = 136 (52.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 37/123 (30%), Positives = 63/123 (51%)
Query: 253 LTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGK 312
+ C + P + T+LT+S+DG + +W KS + + + LA R V +C + DG+
Sbjct: 29 VNCSAFSPDGR-TLLTASDDGCVYVWGT---KSGRLLWR--LAGH-RGPVKSCCFSPDGR 81
Query: 313 CIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVW 372
IA D SI++W++ +HV KGH + + FS D + L S +D VW
Sbjct: 82 LIASSSSDHSIRLWDV----ARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVW 137
Query: 373 DLR 375
+++
Sbjct: 138 EVQ 140
Score = 127 (49.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 39/122 (31%), Positives = 61/122 (50%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQV 325
I +SS D S+R+WDV K V+K + +V T ++ D K +A G D V
Sbjct: 83 IASSSSDHSIRLWDVARSKCL-HVLKGH-----QRSVETVSFSPDSKQLASGGWDKRAIV 136
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFE 385
W ++ G R +H+ GH D I + FS L + S+D ++ +WDLR P+ +
Sbjct: 137 WEVQSG--RR--VHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRA-STPVVSYH 191
Query: 386 DL 387
+L
Sbjct: 192 NL 193
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 302 VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
V A+ DG+ + DG + VW K G R + GH + + FS DGR++
Sbjct: 29 VNCSAFSPDGRTLLTASDDGCVYVWGTKSG---RLLWRLA-GHRGPVKSCCFSPDGRLIA 84
Query: 362 SRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTG 408
S S D S+++WD+ + K L V + + +T V+FSPD + +G
Sbjct: 85 SSSSDHSIRLWDVARSK-CLHVLKGHQRS-VET-VSFSPDSKQLASG 128
Score = 60 (26.2 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNL 202
L GH V + G + S S D+++R++D +R + L+ GHQ V +
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDV----ARSKCLHVLK---GHQRSVETV 116
Query: 203 SWSPTS 208
S+SP S
Sbjct: 117 SFSPDS 122
>ASPGD|ASPL0000015866 [details] [associations]
symbol:AN8183 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0030529 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
ProteinModelPortal:C8V743 EnsemblFungi:CADANIAT00004225
Uniprot:C8V743
Length = 851
Score = 155 (59.6 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 42/151 (27%), Positives = 79/151 (52%)
Query: 261 KTKETI-LTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV-AVTTCAWDCDGKCIAGGI 318
KT E + SS+ G L +W E++S+ ++K + G + ++ A+ DG+ I
Sbjct: 305 KTGEWLAFGSSKFGQLLVW---EWQSESYILKQQ----GHLDSMNALAYSPDGQRIVTAA 357
Query: 319 GDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMK 378
DG I+VW++K G+ + H+ +TA +FS G +L + S DGS++ WDL + +
Sbjct: 358 DDGKIKVWDVKSGFC----LVTFTEHTSGVTACQFSKKGNVLFTSSLDGSVRAWDLIRYR 413
Query: 379 EPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
+ F P+ + +++A P ++ G+
Sbjct: 414 N-FRTFT-APSRLSFSSLAVDPSGEVICAGS 442
Score = 123 (48.4 bits), Expect = 0.00060, P = 0.00060
Identities = 34/115 (29%), Positives = 58/115 (50%)
Query: 249 HICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWD 308
H G+T ++ K + TSS DGS+R WD+ +++ + P R++ ++ A D
Sbjct: 379 HTSGVTACQFSKKGN-VLFTSSLDGSVRAWDLIRYRNFRT-----FTAPSRLSFSSLAVD 432
Query: 309 CDGKCIAGGIGDG-SIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
G+ I G D I VW+++ G + GH ++AL F++DG LL+
Sbjct: 433 PSGEVICAGSPDSFDIHVWSVQTG----QLLDQLSGHEGPVSALAFAADGNHLLT 483
Score = 54 (24.1 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 31/128 (24%), Positives = 57/128 (44%)
Query: 155 LAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSWSPTSDRFLCV 214
L+VD G +L+ V++Y+F R+ + + PS H + R L +
Sbjct: 71 LSVDEHGRAILTNLLR-RVQIYNFS-FKGRVSALK-FSPSGRHFAVGVG------RRLQI 121
Query: 215 TGSAQAKIYDRDG-LTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDG 273
+ + DG + FV ++ RDL GH + EW ++ +LT+S+D
Sbjct: 122 WHTPETPTVGGDGEIDFAPFV---LH-RDLA---GHFDEVQHIEWSSDSR-FLLTASKDL 173
Query: 274 SLRIWDVN 281
+ R+W ++
Sbjct: 174 TARVWSLD 181
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 156 (60.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 64/279 (22%), Positives = 126/279 (45%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRN 201
E LKGHT V ++ DHSG + S S D T++++DFQG + R + + H V +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF----ECIRTMHGHD-HNVSS 197
Query: 202 LSWSPTSDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLK-NTKGHICGLTCGEWH 259
++ P D + + K+++ + G + F ++R ++ N G + +C +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA-SCS--N 254
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIK--PKLARPGRVAVTTCAWDCDGK---CI 314
+T + ++++ ++ E + + I P+ + T GK +
Sbjct: 255 DQTVRVWVVATKECKA---ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 315 AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
G D +I++W++ G + GH + + + F S G+ +LS + D +L+VWD
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
K K +K + + T++ F +TG SV++
Sbjct: 368 -KNKRCMKTLN--AHEHFVTSLDFHKTAPYVVTG-SVDQ 402
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 156 (60.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 64/279 (22%), Positives = 126/279 (45%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRN 201
E LKGHT V ++ DHSG + S S D T++++DFQG + R + + H V +
Sbjct: 143 ERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGF----ECIRTMHGHD-HNVSS 197
Query: 202 LSWSPTSDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLK-NTKGHICGLTCGEWH 259
++ P D + + K+++ + G + F ++R ++ N G + +C +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA-SCS--N 254
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIK--PKLARPGRVAVTTCAWDCDGK---CI 314
+T + ++++ ++ E + + I P+ + T GK +
Sbjct: 255 DQTVRVWVVATKECKA---ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 315 AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
G D +I++W++ G + GH + + + F S G+ +LS + D +L+VWD
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
K K +K + + T++ F +TG SV++
Sbjct: 368 -KNKRCMKTLN--AHEHFVTSLDFHKTAPYVVTG-SVDQ 402
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 156 (60.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 64/279 (22%), Positives = 126/279 (45%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRN 201
E LKGHT V ++ DHSG + S S D T++++DFQG + R + + H V +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF----ECIRTMHGHD-HNVSS 197
Query: 202 LSWSPTSDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLK-NTKGHICGLTCGEWH 259
++ P D + + K+++ + G + F ++R ++ N G + +C +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA-SCS--N 254
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIK--PKLARPGRVAVTTCAWDCDGK---CI 314
+T + ++++ ++ E + + I P+ + T GK +
Sbjct: 255 DQTVRVWVVATKECKA---ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 315 AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
G D +I++W++ G + GH + + + F S G+ +LS + D +L+VWD
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
K K +K + + T++ F +TG SV++
Sbjct: 368 -KNKRCMKTLN--AHEHFVTSLDFHKTAPYVVTG-SVDQ 402
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 156 (60.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 64/279 (22%), Positives = 126/279 (45%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRN 201
E LKGHT V ++ DHSG + S S D T++++DFQG + R + + H V +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF----ECIRTMHGHD-HNVSS 197
Query: 202 LSWSPTSDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLK-NTKGHICGLTCGEWH 259
++ P D + + K+++ + G + F ++R ++ N G + +C +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA-SCS--N 254
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIK--PKLARPGRVAVTTCAWDCDGK---CI 314
+T + ++++ ++ E + + I P+ + T GK +
Sbjct: 255 DQTVRVWVVATKECKA---ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 315 AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
G D +I++W++ G + GH + + + F S G+ +LS + D +L+VWD
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
K K +K + + T++ F +TG SV++
Sbjct: 368 -KNKRCMKTLN--AHEHFVTSLDFHKTAPYVVTG-SVDQ 402
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 156 (60.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 64/279 (22%), Positives = 126/279 (45%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRN 201
E LKGHT V ++ DHSG + S S D T++++DFQG + R + + H V +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF----ECIRTMHGHD-HNVSS 197
Query: 202 LSWSPTSDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLK-NTKGHICGLTCGEWH 259
++ P D + + K+++ + G + F ++R ++ N G + +C +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA-SCS--N 254
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIK--PKLARPGRVAVTTCAWDCDGK---CI 314
+T + ++++ ++ E + + I P+ + T GK +
Sbjct: 255 DQTVRVWVVATKECKA---ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 315 AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
G D +I++W++ G + GH + + + F S G+ +LS + D +L+VWD
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
K K +K + + T++ F +TG SV++
Sbjct: 368 -KNKRCMKTLN--AHEHFVTSLDFHKTAPYVVTG-SVDQ 402
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 156 (60.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 64/279 (22%), Positives = 126/279 (45%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRN 201
E LKGHT V ++ DHSG + S S D T++++DFQG + R + + H V +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF----ECIRTMHGHD-HNVSS 197
Query: 202 LSWSPTSDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLK-NTKGHICGLTCGEWH 259
++ P D + + K+++ + G + F ++R ++ N G + +C +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA-SCS--N 254
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIK--PKLARPGRVAVTTCAWDCDGK---CI 314
+T + ++++ ++ E + + I P+ + T GK +
Sbjct: 255 DQTVRVWVVATKECKA---ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 315 AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
G D +I++W++ G + GH + + + F S G+ +LS + D +L+VWD
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
K K +K + + T++ F +TG SV++
Sbjct: 368 -KNKRCMKTLN--AHEHFVTSLDFHKTAPYVVTG-SVDQ 402
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 156 (60.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 64/279 (22%), Positives = 126/279 (45%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRN 201
E LKGHT V ++ DHSG + S S D T++++DFQG + R + + H V +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF----ECIRTMHGHD-HNVSS 197
Query: 202 LSWSPTSDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLK-NTKGHICGLTCGEWH 259
++ P D + + K+++ + G + F ++R ++ N G + +C +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA-SCS--N 254
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIK--PKLARPGRVAVTTCAWDCDGK---CI 314
+T + ++++ ++ E + + I P+ + T GK +
Sbjct: 255 DQTVRVWVVATKECKA---ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 315 AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
G D +I++W++ G + GH + + + F S G+ +LS + D +L+VWD
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
K K +K + + T++ F +TG SV++
Sbjct: 368 -KNKRCMKTLN--AHEHFVTSLDFHKTAPYVVTG-SVDQ 402
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 156 (60.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 64/279 (22%), Positives = 126/279 (45%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRN 201
E LKGHT V ++ DHSG + S S D T++++DFQG + R + + H V +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF----ECIRTMHGHD-HNVSS 197
Query: 202 LSWSPTSDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLK-NTKGHICGLTCGEWH 259
++ P D + + K+++ + G + F ++R ++ N G + +C +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA-SCS--N 254
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIK--PKLARPGRVAVTTCAWDCDGK---CI 314
+T + ++++ ++ E + + I P+ + T GK +
Sbjct: 255 DQTVRVWVVATKECKA---ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 315 AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
G D +I++W++ G + GH + + + F S G+ +LS + D +L+VWD
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
K K +K + + T++ F +TG SV++
Sbjct: 368 -KNKRCMKTLN--AHEHFVTSLDFHKTAPYVVTG-SVDQ 402
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 156 (60.0 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 64/279 (22%), Positives = 126/279 (45%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRN 201
E LKGHT V ++ DHSG + S S D T++++DFQG + R + + H V +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF----ECIRTMHGHD-HNVSS 197
Query: 202 LSWSPTSDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLK-NTKGHICGLTCGEWH 259
++ P D + + K+++ + G + F ++R ++ N G + +C +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA-SCS--N 254
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIK--PKLARPGRVAVTTCAWDCDGK---CI 314
+T + ++++ ++ E + + I P+ + T GK +
Sbjct: 255 DQTVRVWVVATKECKA---ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 315 AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
G D +I++W++ G + GH + + + F S G+ +LS + D +L+VWD
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
K K +K + + T++ F +TG SV++
Sbjct: 368 -KNKRCMKTLN--AHEHFVTSLDFHKTAPYVVTG-SVDQ 402
>UNIPROTKB|Q9NRL3 [details] [associations]
symbol:STRN4 "Striatin-4" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0051721 "protein phosphatase 2A
binding" evidence=IDA] [GO:0000159 "protein phosphatase type 2A
complex" evidence=IDA] [GO:0070016 "armadillo repeat domain
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0032403 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005516 GO:GO:0051721
InterPro:IPR013258 Pfam:PF08232 HOGENOM:HOG000236343
HOVERGEN:HBG007117 EMBL:AF212940 EMBL:BC004910 EMBL:BC034604
IPI:IPI00003016 RefSeq:NP_001034966.1 RefSeq:NP_037535.2
UniGene:Hs.631590 ProteinModelPortal:Q9NRL3 SMR:Q9NRL3
IntAct:Q9NRL3 MINT:MINT-1371553 STRING:Q9NRL3 PhosphoSite:Q9NRL3
DMDM:152031693 PaxDb:Q9NRL3 PRIDE:Q9NRL3 Ensembl:ENST00000263280
GeneID:29888 KEGG:hsa:29888 UCSC:uc002pfl.3 CTD:29888
GeneCards:GC19M047222 H-InvDB:HIX0096898 HGNC:HGNC:15721
HPA:HPA043527 MIM:614767 neXtProt:NX_Q9NRL3 PharmGKB:PA134863218
PhylomeDB:Q9NRL3 ChiTaRS:STRN4 GenomeRNAi:29888 NextBio:52431
PMAP-CutDB:Q9NRL3 ArrayExpress:Q9NRL3 Bgee:Q9NRL3 CleanEx:HS_STRN4
Genevestigator:Q9NRL3 GermOnline:ENSG00000090372 Uniprot:Q9NRL3
Length = 753
Score = 160 (61.4 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 68/234 (29%), Positives = 104/234 (44%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQV----IKPKLA-RPGRVA 301
+ H G+ +H ++ +LT+SEDG+L++W++ + + K+ ++P A R R
Sbjct: 435 RSHYDGIRSLAFH-HSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGP 493
Query: 302 VTTCAWDCDGK-CIAGGIGDGSIQVW-----NLKPGWGSRPDI--HVEKGHSDDITALKF 353
V A + + C +GG D I W ++ P G P + HV +GH D + L F
Sbjct: 494 VLAVAMGSNSEYCYSGG-ADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAF 552
Query: 354 SSDGRILLSRSFDGSLKVWDLRKMKEP-LKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVE 412
S + L S S DG++++WD L F + T+VAF+ E +
Sbjct: 553 SPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPAHIVA---- 608
Query: 413 RESTTGGLLCFYDREK----LELVSRVGISPACSVVQCAWHPKLNQ-IFATAGD 461
S G YD E L L SR G S + Q HP NQ + TA D
Sbjct: 609 --SFRSGDTVLYDMEVGSALLTLESR-GSSGPTQINQVVSHP--NQPLTITAHD 657
>UNIPROTKB|F8VYA6 [details] [associations]
symbol:STRN4 "Striatin-4" species:9606 "Homo sapiens"
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0043197
"dendritic spine" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043197 InterPro:IPR013258 Pfam:PF08232
EMBL:AC008622 EMBL:AC008635 RefSeq:NP_001034966.1 UniGene:Hs.631590
GeneID:29888 KEGG:hsa:29888 CTD:29888 HGNC:HGNC:15721 ChiTaRS:STRN4
GenomeRNAi:29888 NextBio:52431 OMA:RPHEGSF IPI:IPI00741970
ProteinModelPortal:F8VYA6 SMR:F8VYA6 PRIDE:F8VYA6
Ensembl:ENST00000391910 UCSC:uc002pfm.3 ArrayExpress:F8VYA6
Bgee:F8VYA6 Uniprot:F8VYA6
Length = 760
Score = 160 (61.4 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 68/234 (29%), Positives = 104/234 (44%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQV----IKPKLA-RPGRVA 301
+ H G+ +H ++ +LT+SEDG+L++W++ + + K+ ++P A R R
Sbjct: 442 RSHYDGIRSLAFH-HSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGP 500
Query: 302 VTTCAWDCDGK-CIAGGIGDGSIQVW-----NLKPGWGSRPDI--HVEKGHSDDITALKF 353
V A + + C +GG D I W ++ P G P + HV +GH D + L F
Sbjct: 501 VLAVAMGSNSEYCYSGG-ADACIHSWKIPDLSMDPYDGYDPSVLSHVLEGHGDAVWGLAF 559
Query: 354 SSDGRILLSRSFDGSLKVWDLRKMKEP-LKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVE 412
S + L S S DG++++WD L F + T+VAF+ E +
Sbjct: 560 SPTSQRLASCSADGTVRIWDPSSSSPACLCTFPTASEHGVPTSVAFTSTEPAHIVA---- 615
Query: 413 RESTTGGLLCFYDREK----LELVSRVGISPACSVVQCAWHPKLNQ-IFATAGD 461
S G YD E L L SR G S + Q HP NQ + TA D
Sbjct: 616 --SFRSGDTVLYDMEVGSALLTLESR-GSSGPTQINQVVSHP--NQPLTITAHD 664
>WB|WBGene00019434 [details] [associations]
symbol:nmtn-1 species:6239 "Caenorhabditis elegans"
[GO:0040002 "collagen and cuticulin-based cuticle development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0040002 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00550000074331
EMBL:FO080960 OMA:RVCAYPD RefSeq:NP_491864.2
ProteinModelPortal:H2KZG7 SMR:H2KZG7 IntAct:H2KZG7
EnsemblMetazoa:K06A5.8b.1 EnsemblMetazoa:K06A5.8b.2 GeneID:172355
KEGG:cel:CELE_K06A5.8 CTD:172355 WormBase:K06A5.8b Uniprot:H2KZG7
Length = 942
Score = 161 (61.7 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 65/278 (23%), Positives = 129/278 (46%)
Query: 146 KGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSWS 205
K H V L+ + +G + +GS D T+R+ F + R+ + +L +G VR+L +
Sbjct: 677 KQHRGSVYCLSFNPNGDLLATGSNDKTIRLMAFNEDSCRIGAEMELTCHDG-TVRDLIFI 735
Query: 206 PTS-DRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKE 264
+S +R + + L + + G + I+ +K I GL W +
Sbjct: 736 ESSINRSTILVSGGAGNCH----LNVTDCNTGQL-IQSMKGHTAPILGLYT--WSQAGNQ 788
Query: 265 TILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA-VTTCAWDCDGKCIAGGIGDGSI 323
+ + S+D ++R WD+ + ++ VI P + + VT+ D +GK + G D S+
Sbjct: 789 FV-SCSQDKTIRFWDLRQ-QTAVNVISPGSNKSHNASPVTSVCVDPNGKLLVSGHEDASV 846
Query: 324 QVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLR-KMKEPLK 382
++++ G G+R + + H D++ ++FS+ LL+ S+D + + D+R + PL
Sbjct: 847 ALFDI--G-GNRI-LQTFRPHGDEVRTVRFSNAAYYLLTASYDKRVVISDMRGDLMAPLM 902
Query: 383 VFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGL 420
++ + P + FL+ TS +R + L
Sbjct: 903 YLPVAEHSDKVVQCRWHPHDFSFLS-TSADRSAVLWSL 939
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 148 (57.2 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 36/119 (30%), Positives = 63/119 (52%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQV 325
IL++S+D W ++ +S K + K + ++AV + + DG G D +++
Sbjct: 308 ILSASDDS---YWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFGTGAADAVVKI 364
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVF 384
W+LK ++ GH+ + ++ FS +G L + S DG +K+WDLRK+K LK F
Sbjct: 365 WDLK----NQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVKLWDLRKLKN-LKTF 418
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 60/256 (23%), Positives = 111/256 (43%)
Query: 146 KGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSR-LQSFRQLEPSE------GHQ 198
KGH K ++A+ + +S S D +R++ +S+ + Q ++ G
Sbjct: 248 KGHNKKINAVVLHPDNITAISASADSHIRVWSATDSSSKAIIDVHQAPVTDISLNASGDY 307
Query: 199 VRNLS----WSPT---SDRFLC---VTGSAQAKIYD----RDGLTLGEFVKGDMYIR--D 242
+ + S W+ + S + LC V +Q ++ DGL G D ++ D
Sbjct: 308 ILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFGTGA-ADAVVKIWD 366
Query: 243 LKNTK------GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLAR 296
LKN GH + + + + T SEDG +++WD+ + K+ K A
Sbjct: 367 LKNQTVAAAFPGHTAAVRSIAFS-ENGYYLATGSEDGEVKLWDLRKLKNLKT-----FAN 420
Query: 297 PGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSD 356
+ + + ++D G + GIG +QV ++K W + HS +T ++F +
Sbjct: 421 EEKQPINSLSFDMTGTFL--GIGGQKVQVLHVK-SWSEVVSL---SDHSGPVTGVRFGEN 474
Query: 357 GRILLSRSFDGSLKVW 372
R L++ S D SL+V+
Sbjct: 475 ARSLVTCSLDKSLRVF 490
Score = 54 (24.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 156 AVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFR 189
A+D G+ L+G D TV +YD++ +Q+F+
Sbjct: 216 ALDIKGNLSLTGGIDKTVVLYDYE-KEQVMQTFK 248
Score = 37 (18.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 18 EKIHNATRRSDPLTTTTAATDNEKNNLPSISSSSK 52
+KI+ D +T +A+ D+ + SSSK
Sbjct: 252 KKINAVVLHPDNITAISASADSHIRVWSATDSSSK 286
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 165 (63.1 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 53/172 (30%), Positives = 88/172 (51%)
Query: 274 SLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWG 333
S +I+DV+ K + + G + + + + DG +A G D +++VW++
Sbjct: 303 SAQIYDVDTGKKVHAFVDES-EKDGDLYIRSVCFSPDGNYLATGAEDKTVKVWDIH---- 357
Query: 334 SRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVF-EDL-PNNY 391
++ H GH DI +L +SSDGR ++S S D K+WD+ K K + E++ P N
Sbjct: 358 TKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKN- 416
Query: 392 AQTNVAFSPDEQLFLTGT--SVER--ESTTGGLLCFYDREKLELVSRVGISP 439
T+VA SPD +L G+ ++ R ++ TG L Y+ L+ V V SP
Sbjct: 417 GVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGH-LDSVYSVAFSP 467
Score = 134 (52.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 65/222 (29%), Positives = 104/222 (46%)
Query: 196 GHQVRNLSWSPTSD-RFLCVTGSA--QAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICG 252
GH++ S +SD RF+ V+GS +AKI+D + F G+ + KN G
Sbjct: 367 GHELDIYSLDYSSDGRFI-VSGSGDKKAKIWDIEKGKCA-FTLGNEEVGP-KN------G 417
Query: 253 LTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV-AVTTCAWDCDG 311
+T P + + S D +R+WD +Q + G + +V + A+ DG
Sbjct: 418 VTSVAMSPDGR-LVAAGSLDNIVRLWD-----AQTGYFLERYE--GHLDSVYSVAFSPDG 469
Query: 312 KCIAGGIGDGSIQVWNLKPGWGSRPDIHVE-KGHSDDITALKFSSDGRILLSRSFDGSLK 370
K +A G D S+++W+L G SR GH D + ++ FS DG L+S S D S++
Sbjct: 470 KSLASGSLDKSLKLWDLS-GSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQ 528
Query: 371 VWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQ---LFLTGT 409
WD R + + + N+ +VA SP +F TG+
Sbjct: 529 FWDPRNGTTHM-MLQGHKNSVI--SVALSPKNNSHGVFATGS 567
Score = 38 (18.4 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 8/37 (21%), Positives = 18/37 (48%)
Query: 8 GKQAKSQTPLEKIHNATRRSDPLTTTTAATDNEKNNL 44
G+ S +PL+ + + ++ + + +N NNL
Sbjct: 189 GQSFPSLSPLDSNRHPKEMGNNMSGNSMSMNNNNNNL 225
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 155 (59.6 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 64/279 (22%), Positives = 125/279 (44%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRN 201
E LKGHT V ++ DHSG + S S D T++++DFQG + R + + H V +
Sbjct: 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF----ECIRTMHGHD-HNVSS 197
Query: 202 LSWSPTSDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLK-NTKGHICGLTCGEWH 259
++ P D + K+++ + G + F ++R ++ N G + +C +
Sbjct: 198 VAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA-SCS--N 254
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIK--PKLARPGRVAVTTCAWDCDGK---CI 314
+T + ++++ ++ E + + I P+ + T GK +
Sbjct: 255 DQTVRVWVVATKECKA---ELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 311
Query: 315 AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
G D +I++W++ G + GH + + + F S G+ +LS + D +L+VWD
Sbjct: 312 LSGSRDKTIKMWDVSTGMCLMTLV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
K K +K + + T++ F +TG SV++
Sbjct: 368 -KNKRCMKTLN--AHEHFVTSLDFHKTAPYVVTG-SVDQ 402
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 158 (60.7 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 55/187 (29%), Positives = 89/187 (47%)
Query: 263 KETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCD--GKCIAGGIGD 320
+E I+ S+ GS+R+WD+ K +++ L + C+ D G +A G D
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAK----ILRTLLGHKANI----CSLDFHPYGSFVASGSLD 126
Query: 321 GSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEP 380
I++W+++ + I K H+ + L+FS DG+ L S + D ++K+WDL K
Sbjct: 127 TDIKLWDVR----RKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKV- 181
Query: 381 LKVFEDLPNNYAQTNVA-FSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGISP 439
+FE +Y NV F P E L G+ V R + F+D EK +VS I
Sbjct: 182 --MFE-FTGHYGPVNVVEFHPSEYP-LAGSPVHRT------IRFWDLEKFHVVSC--IEE 229
Query: 440 ACSVVQC 446
+ V+C
Sbjct: 230 EATPVRC 236
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 160 (61.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 48/156 (30%), Positives = 84/156 (53%)
Query: 257 EWHPKTKETILTS-SEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIA 315
E H + +L S S+D ++R+WD S +Q ++ G V + A+ DG+ +A
Sbjct: 700 EGHSNSVWAVLASGSDDETVRLWDPAT-GSLQQTLE---GHSGWVL--SVAFSPDGRLLA 753
Query: 316 GGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWD-- 373
G D ++++W+ P GS +GHS+ + ++ FS DGR+L S SFD ++++WD
Sbjct: 754 SGSFDKTVRLWD--PATGSLQQ--TLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPA 809
Query: 374 LRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
+++ L+ D + VAFSPD +L +G+
Sbjct: 810 TGSLQQTLRGHSDTVRS-----VAFSPDGRLLASGS 840
Score = 135 (52.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/108 (31%), Positives = 59/108 (54%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQV 325
+ + S D ++R+WD Q+ + R V + A+ DG+ +A G D ++++
Sbjct: 752 LASGSFDKTVRLWDPATGSLQQTL------RGHSNWVRSVAFSPDGRLLASGSFDKTVRL 805
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWD 373
W+ P GS +GHSD + ++ FS DGR+L S SFD ++++WD
Sbjct: 806 WD--PATGSLQQ--TLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWD 849
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 153 (58.9 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 58/188 (30%), Positives = 94/188 (50%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTS-SEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
++ KGH G+ K +LTS S+D ++++WD + K + I+ K P
Sbjct: 128 IRKHKGH-AGVVNALDVLKVGSELLTSVSDDCTMKVWD-SRSKDCIKTIEEKY--P---- 179
Query: 302 VTTCAWDCDG-KCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL 360
+T A G + GGI DG+I++W+L+ S HV KGH D IT+L S DG L
Sbjct: 180 LTAVAIAQQGTQVFIGGI-DGAIKIWDLRNNHCS----HVLKGHKDIITSLAISKDGSSL 234
Query: 361 LSRSFDGSLKVWDLRKM---KEPLKVFEDLPNNYAQT--NVAFSPDEQLFLTGTSVERE- 414
LS S D +++++D++ + L++FE + VA+S + + G+S +
Sbjct: 235 LSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLGVAWSRNSRFVGAGSSDKNVY 294
Query: 415 --STTGGL 420
S TG L
Sbjct: 295 VWSATGDL 302
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 43/142 (30%), Positives = 71/142 (50%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD---FQGMNSRLQSFRQLEPSEGHQVR 200
VLKGH I+++LA+ GS +LS S D TVR++D F +LQ F + H +
Sbjct: 214 VLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLL 273
Query: 201 NLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDM-YIRDLKNTKGHICGLTCGEWH 259
++WS S RF+ GS+ +Y GD+ Y+ GH + ++H
Sbjct: 274 GVAWSRNS-RFVGA-GSSDKNVYVWSAT-------GDLRYV-----LPGHEGSVNHVDFH 319
Query: 260 PKTKETILTSSEDGSLRIWDVN 281
P ++ IL+ S D ++ + ++N
Sbjct: 320 PH-QDIILSCSSDRTIFLGELN 340
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 157 (60.3 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 42/137 (30%), Positives = 63/137 (45%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQV 325
+ + S+D S RI+D K + + K P + C D + I GGI D I+V
Sbjct: 163 VASGSDDRSARIFDTRS-KGSTHLFQHKY--P---VTSVCFSDASDQLITGGI-DNVIRV 215
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEP---LK 382
W+++ ++ H D IT+ S DG LLS S D S K+WD+R P +K
Sbjct: 216 WDIR---NQEDPLYTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIK 272
Query: 383 VFEDLPNNYAQTNVAFS 399
F NN+ + + S
Sbjct: 273 TFNGAQNNFEKNLIKSS 289
Score = 117 (46.2 bits), Expect = 0.00075, P = 0.00075
Identities = 39/155 (25%), Positives = 71/155 (45%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
LK KG I L W + E I T+ D S+ +WD N+ ++IK ++ V
Sbjct: 101 LKGHKGTILEL---HWSTDSNE-IYTACTDKSIGVWDSNK----GELIK-RIREHSGVVN 151
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
+ C +A G D S ++++ + S+ H+ + H +T++ FS L++
Sbjct: 152 SCCPARRGPPLVASGSDDRSARIFDTR----SKGSTHLFQ-HKYPVTSVCFSDASDQLIT 206
Query: 363 RSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVA 397
D ++VWD+R ++PL + T+V+
Sbjct: 207 GGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVS 241
Score = 38 (18.4 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 141 NEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD 177
N VLKGH + L + + + D ++ ++D
Sbjct: 97 NYSVLKGHKGTILELHWSTDSNEIYTACTDKSIGVWD 133
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 151 (58.2 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 39/129 (30%), Positives = 71/129 (55%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH + E + +E ++++S+DG++ IWD + K ++ +L P +T A
Sbjct: 149 GHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQ-KEAIDYLETEL--P----ITAVAQ 201
Query: 308 -DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFD 366
+ + +GGI D +I VW+++ + ++ GH D IT+L+ S D + LLS SFD
Sbjct: 202 SEAGNEVFSGGI-DNAIHVWDIR----KKAIVYSMAGHMDTITSLEVSPDSQTLLSNSFD 256
Query: 367 GSLKVWDLR 375
+++ WD+R
Sbjct: 257 STVRTWDIR 265
Score = 131 (51.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 37/132 (28%), Positives = 67/132 (50%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA--VTTC 305
GH+ +T E P + +T+L++S D ++R WD+ F + I+ P + +
Sbjct: 233 GHMDTITSLEVSPDS-QTLLSNSFDSTVRTWDIRPFAPTNRHIRTYDGAPVGLEKNLIRA 291
Query: 306 AWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGR-ILLSRS 364
+W+ G IA G GD S+ VW+ K G ++ GH + ++F+ + I++S S
Sbjct: 292 SWNPAGDKIAAGSGDRSVVVWDFKTG----KILYKLPGHKGTVNDVRFTPNNEPIIVSAS 347
Query: 365 FDGSLKVWDLRK 376
D +L + +L K
Sbjct: 348 SDRNLMLGELGK 359
Score = 87 (35.7 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 33/135 (24%), Positives = 65/135 (48%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSW 204
L GH+ V A+ D + + SGS D ++ +++ G + +++ L +G + +L W
Sbjct: 62 LTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYG---QCENYGILSGHKG-AILDLQW 117
Query: 205 SPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKE 264
S S + SA + D + G+ ++ YI GH + E + +E
Sbjct: 118 SRDSKTIF--SASADMTLASWD-IESGQRIR--RYI-------GHEEVINSVEISKRGQE 165
Query: 265 TILTSSEDGSLRIWD 279
++++S+DG++ IWD
Sbjct: 166 MLVSASDDGTMGIWD 180
Score = 86 (35.3 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 32/161 (19%), Positives = 68/161 (42%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV-AVTTCAWDCDGKCIAGGIGDGSIQ 324
+ + D ++ +WD+ +K+ I +A G + +T+ D + + D +++
Sbjct: 208 VFSGGIDNAIHVWDI-----RKKAIVYSMA--GHMDTITSLEVSPDSQTLLSNSFDSTVR 260
Query: 325 VWNLKPGWGSRPDIHVEKGH----SDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEP 380
W+++P + I G ++ ++ G + + S D S+ VWD + K
Sbjct: 261 TWDIRPFAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDKIAAGSGDRSVVVWDFKTGK-- 318
Query: 381 LKVFEDLPNNYAQTN-VAFSPDEQLFLTGTSVERESTTGGL 420
+ LP + N V F+P+ + + S +R G L
Sbjct: 319 --ILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNLMLGEL 357
Score = 44 (20.5 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 10/45 (22%), Positives = 19/45 (42%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSF 188
+L GH + L + S S D T+ +D + R++ +
Sbjct: 104 ILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIES-GQRIRRY 147
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 157 (60.3 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 56/188 (29%), Positives = 91/188 (48%)
Query: 263 KETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCD--GKCIAGGIGD 320
+E I+ S+ GS+R+WD+ K +++ L + C+ D G +A G D
Sbjct: 74 EELIVAGSQSGSIRVWDLEAAK----ILRTLLGHKANI----CSLDFHPYGSFVASGSLD 125
Query: 321 GSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEP 380
I++W+++ + I K H+ + L+FS DG+ L S + D ++K+WDL K
Sbjct: 126 TDIKLWDVR----RKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKV- 180
Query: 381 LKVFEDLPNNYAQTNVA-FSPD-EQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGIS 438
+FE +Y NV F P E L +G+S S T + F+D EK +VS I
Sbjct: 181 --MFE-FTGHYGPVNVVEFHPSIEYLLASGSS----SMT---IRFWDLEKFHVVSC--IE 228
Query: 439 PACSVVQC 446
+ V+C
Sbjct: 229 EEATPVRC 236
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 157 (60.3 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 56/188 (29%), Positives = 91/188 (48%)
Query: 263 KETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCD--GKCIAGGIGD 320
+E I+ S+ GS+R+WD+ K +++ L + C+ D G +A G D
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAK----ILRTLLGHKANI----CSLDFHPYGSFVASGSLD 126
Query: 321 GSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEP 380
I++W+++ + I K H+ + L+FS DG+ L S + D ++K+WDL K
Sbjct: 127 TDIKLWDVR----RKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKV- 181
Query: 381 LKVFEDLPNNYAQTNVA-FSPD-EQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGIS 438
+FE +Y NV F P E L +G+S S T + F+D EK +VS I
Sbjct: 182 --MFE-FTGHYGPVNVVEFHPSIEYLLASGSS----SMT---IRFWDLEKFHVVSC--IE 229
Query: 439 PACSVVQC 446
+ V+C
Sbjct: 230 EEATPVRC 237
>FB|FBgn0034527 [details] [associations]
symbol:CG9945 species:7227 "Drosophila melanogaster"
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE013599 GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 HSSP:P16649 KO:K11801 InterPro:IPR017399
PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507 OMA:RMLHQRE
EMBL:AY075228 RefSeq:NP_611494.1 RefSeq:NP_725981.1 UniGene:Dm.5593
SMR:Q7JYQ4 STRING:Q7JYQ4 EnsemblMetazoa:FBtr0086225
EnsemblMetazoa:FBtr0086226 GeneID:37329 KEGG:dme:Dmel_CG9945
UCSC:CG9945-RA FlyBase:FBgn0034527 InParanoid:Q7JYQ4
OrthoDB:EOG4Q83CM GenomeRNAi:37329 NextBio:803134 Uniprot:Q7JYQ4
Length = 511
Score = 155 (59.6 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 59/224 (26%), Positives = 101/224 (45%)
Query: 158 DHSGSRVLSGSYDYTVRMYD-FQGMNSRLQSFRQLEPSEGHQVRNLSWSPTSDRFLCVTG 216
+ SGS++L+ D VR+YD +G L R + + + +SP + F T
Sbjct: 137 NRSGSKLLTACQDGFVRIYDGAKGTYHLLNRIRARDVE--WSIIDADFSPNGEHFAYSTW 194
Query: 217 SAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLR 276
S I +G GE D D+ H + + P T + I+ S + ++
Sbjct: 195 SRSLFIMPVNG---GE---DDCQWIDVNGLPSHRLAIFSLRYSP-TGDKIIGGSNNSTVI 247
Query: 277 IWDVNEFKSQKQVIKPKLARPGRVAVTTC-AWDCDGKCIAGGIGDGSIQVWNLKPGWGSR 335
+ D+ +Q +++ PG+ + C D D I G DG ++V++L+ + SR
Sbjct: 248 VTDIRTRNTQ--ILRTH-RMPGKDVNSVCFLHDKDPNVIIAGCDDGLLKVYDLRTTFRSR 304
Query: 336 P---DIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRK 376
+ GH D IT + +DG +LS S D S+K+WD+R+
Sbjct: 305 DLSKSVASFIGHYDGITYIDSRNDGYHVLSNSKDQSIKIWDIRQ 348
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 64/275 (23%), Positives = 118/275 (42%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRN 201
E LKGHT V ++ DH+G + S S D T++++DFQG + R + + H V +
Sbjct: 143 ERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF----ECIRTMHGHD-HNVSS 197
Query: 202 LSWSPTSDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLK-NTKGHICGLTCGEWH 259
++ P D + + K+++ + G + F ++R ++ N G + +C
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA-SCSNDQ 256
Query: 260 PKTKETILTSSEDGSLRIWD-VNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGI 318
+ T LR + V E S + T + G + G
Sbjct: 257 TVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSETKKSGK-PGPFLLSGS 315
Query: 319 GDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMK 378
D +I++W++ G + GH + + + F S G+ +LS + D +L+VWD K K
Sbjct: 316 RDKTIKMWDISTGMCLMTLV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDF-KNK 370
Query: 379 EPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
+K + + T++ F +TG SV++
Sbjct: 371 RCMKTLN--AHEHFVTSLDFHKTAPYVVTG-SVDQ 402
>UNIPROTKB|B3MJV8 [details] [associations]
symbol:GF14067 "Ribosome biogenesis protein WDR12 homolog"
species:7217 "Drosophila ananassae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH902620 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001963192.1 ProteinModelPortal:B3MJV8 STRING:B3MJV8
EnsemblMetazoa:FBtr0118767 GeneID:6496895 KEGG:dan:Dana_GF14067
FlyBase:FBgn0091094 InParanoid:B3MJV8 Uniprot:B3MJV8
Length = 419
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 59/250 (23%), Positives = 116/250 (46%)
Query: 143 IVLKGHT---KIVSALAVDHSGSRVLSGSYDYTVRMYDFQ-GMNSRLQSFRQLEPSEGHQ 198
+ + GHT K V +++D R +S S D T ++ + G N+ + +GH+
Sbjct: 138 LTISGHTAPIKAVDWISLDEESGRFVSSSQDQTAMLWQWNVGSNTA----ECVSVCKGHE 193
Query: 199 --VRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMY---IRDLKNT-KGHICG 252
V ++S SP RF + K++ + GE M +R K T +GH
Sbjct: 194 RGVDSVSVSPDGQRFATGSWDTMLKVWSAELDDAGEGTSKRMKESGVRTPKMTLQGHRES 253
Query: 253 LTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGK 312
++ +W + T+LT S D +L++WD++ + IK +++ ++ ++ +
Sbjct: 254 ISAVQWMDAS--TLLTGSWDHTLKVWDLS-----LEGIKTEIST--NKSIFDASYSNLNR 304
Query: 313 CIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL-LSRSFDGSLKV 371
I D ++++++ + GS + GH+ + A+ +S+ L +S ++D K+
Sbjct: 305 LIVTASADKNLRLYDARTNQGSVVR-NTYLGHNAWVQAVMWSTTEEFLFVSGAYDNQNKL 363
Query: 372 WDLRKMKEPL 381
WD R K PL
Sbjct: 364 WDCRSPKAPL 373
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 156 (60.0 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 53/186 (28%), Positives = 90/186 (48%)
Query: 263 KETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCD--GKCIAGGIGD 320
+E I+ S+ GS+R+WD+ K +++ L + C+ D G +A G D
Sbjct: 75 EELIVAGSQSGSIRVWDLEAAK----ILRTLLGHKANI----CSLDFHPYGSFVASGSLD 126
Query: 321 GSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEP 380
I++W+++ + I K H+ + L+FS DG+ L S + D ++K+WDL K
Sbjct: 127 TDIKLWDVR----RKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKV- 181
Query: 381 LKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGISPA 440
+FE ++ V F P E L +G+S + T + F+D EK +VS I
Sbjct: 182 --MFEFTGHSGPVNVVEFHPSEYLLASGSS---DRT----IRFWDLEKFHVVSC--IEEE 230
Query: 441 CSVVQC 446
+ V+C
Sbjct: 231 ATPVRC 236
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 151 (58.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 47/141 (33%), Positives = 75/141 (53%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDF-QGMNSRLQSFRQLEPSEGHQVRNLS 203
LKGH+ V + + H G LSGS+D T+R++D +G+++RL F+ GH +S
Sbjct: 66 LKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRL--FK------GHTQDVMS 117
Query: 204 WSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
+ +SD ++GS A I + TLGE K L+ + H ++C + P T
Sbjct: 118 VAFSSDNRQIISGSRDATI--KVWNTLGE-CKFT-----LEGPEAHQDWVSCIRFSPNTP 169
Query: 264 ETILTSSEDGSLRIWDVNEFK 284
TI++ S D ++IWD+ FK
Sbjct: 170 -TIVSGSWDNKVKIWDIKSFK 189
Score = 148 (57.2 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 64/248 (25%), Positives = 112/248 (45%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH +T P+ +TI++SS D ++ +W + + + + V
Sbjct: 19 GHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVI 78
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDG 367
DG+ G D ++++W++ G +R + KGH+ D+ ++ FSSD R ++S S D
Sbjct: 79 SHDGQFALSGSWDNTLRLWDITKGVSTR----LFKGHTQDVMSVAFSSDNRQIISGSRDA 134
Query: 368 SLKVWD-LRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDR 426
++KVW+ L + K L+ E ++ + FSP+ ++G S + + + F
Sbjct: 135 TIKVWNTLGECKFTLEGPE-AHQDWVSC-IRFSPNTPTIVSG-SWDNKVKIWDIKSFKCN 191
Query: 427 EKLE----LVSRVGISPACSVVQCAWHPKLNQIFATAGDKSQGGTHILYDPRLSERGALV 482
L V+ V ISP S+ CA K FA + S G LY +L R +
Sbjct: 192 HTLTDHTGYVNTVTISPDGSL--CASGGK--DTFACLWELSSGKP--LY--KLEARNTIN 243
Query: 483 CVARAPRK 490
+A +P K
Sbjct: 244 ALAFSPNK 251
Score = 41 (19.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 350 ALKFSSDGRILLSRSFDGSLKVW 372
+L +S+DG +L + DG ++V+
Sbjct: 302 SLAWSADGSVLYAGYNDGLIRVY 324
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 154 (59.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 48/156 (30%), Positives = 77/156 (49%)
Query: 257 EWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLA--RPGRVAVTTCAWDCDGKCI 314
++ P +K +LT S DG + +WD N K K + A+ A+ DG+ +
Sbjct: 232 KFSPDSKY-LLTGSMDGFIEVWDYNTGKLSKSLAYQSNDDFMMHDDAILCIAFSKDGEFL 290
Query: 315 AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
A G D I+VW +K G R E H++ +T L+FS + +LS SFD SLK+ L
Sbjct: 291 ATGSLDNKIKVWQIKSGKCLRK---FEPAHTNGVTCLQFSRNSTQILSGSFDSSLKIHGL 347
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTS 410
+ K LK+F ++ + F+ DE ++ +S
Sbjct: 348 KSGKA-LKIFRG-HQSFVN-DCCFNHDEDRVISCSS 380
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 114 (45.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 41/149 (27%), Positives = 68/149 (45%)
Query: 134 RHQIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEP 193
+HQIP +L+ HT V L H+G + S S D T +++ + + S +
Sbjct: 259 KHQIPSQTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISA-DGHI-SLKHTLV 316
Query: 194 SEGHQVRNLSWSPTSDRFLCVTGSAQA-KIYDRDGLTLGEFVKGDMYIRDLKNTKGHICG 252
V + WSP DR + G+ + + +D D G+ V MY KG I
Sbjct: 317 GHHKPVIAILWSP-DDRQVLTCGAEEVIRRWDVDS---GDCVH--MY------EKGGISP 364
Query: 253 LTCGEWHPKTKETILTSSEDGSLRIWDVN 281
++CG W+P + I+ D S+ +WD++
Sbjct: 365 ISCG-WYPDG-QGIIAGMTDRSICMWDLD 391
Score = 88 (36.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 27/116 (23%), Positives = 53/116 (45%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQV 325
IL + + +R+W++ K V + K + R + +C IA G D + +
Sbjct: 458 ILVNLLNQEIRLWNIEG--DPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYI 515
Query: 326 WNLKPGWGSRPDIHVE-KGHSDDITALKFSSDG-RILLSRSFDGSLKVWDLRKMKE 379
W+ G + VE GH+ + + +S +L S S DG++++W L ++ +
Sbjct: 516 WHRSTG-----KLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDRINQ 566
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 155 (59.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 42/168 (25%), Positives = 79/168 (47%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH+ + C ++HP + + T S D ++R+WD Q ++ G +V++ A+
Sbjct: 532 GHLSDVDCVQFHPNSNY-VATGSSDRTVRLWD----NMTGQSVRLMTGHKG--SVSSLAF 584
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDG 367
G+ +A G D +I +W+L G + H+ +T + FS DG +L + D
Sbjct: 585 SACGRYLASGSVDHNIIIWDLSNG----SLVTTLLRHTSTVTTITFSRDGTVLAAAGLDN 640
Query: 368 SLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERES 415
+L +WD K+ E + + N+ ++ DE ++L T + S
Sbjct: 641 NLTLWDFHKVTE-----DYISNHITVSHHQDENDEDVYLMRTFPSKNS 683
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 134 (52.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 56/214 (26%), Positives = 100/214 (46%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+GH + C ++P++ + T S D + ++WDV +S ++V LA ++ C
Sbjct: 174 RGHTAEIVCLAFNPQST-LVATGSMDTTAKLWDV---ESGEEV--STLAGHFAEIISLC- 226
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFD 366
++ G + G D + +W++ G +HV GH +I+ ++F+ D ++ + S D
Sbjct: 227 FNTTGDRLVTGSFDHTAILWDVPSG----RKVHVLSGHRGEISCVQFNWDCSLIATASLD 282
Query: 367 GSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLT----GTSVERESTTGGLLC 422
S KVWD + L L +N +V F+ QL T GTS + T LC
Sbjct: 283 KSCKVWDAEG-GQCLATL--LGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLC 339
Query: 423 FYDREKLELVSRVGISPACSVVQCAWHPKLNQIF 456
+ K E +S+V + S V A K ++++
Sbjct: 340 QLEGHKGE-ISKVCFNAQGSRVLTASVDKTSRVW 372
Score = 101 (40.6 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 29/111 (26%), Positives = 57/111 (51%)
Query: 262 TKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDG 321
T + I T+S DG+ R++ + F+ Q+ K G ++ C ++ G + D
Sbjct: 314 TGQLIATASADGTSRVFSTDTFQCLCQLEGHK----GEIS-KVC-FNAQGSRVLTASVDK 367
Query: 322 SIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVW 372
+ +VW +K G + V +GHSD+I + F+ +G +++ S D + ++W
Sbjct: 368 TSRVWCVKTG----ACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 74 (31.1 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 26/85 (30%), Positives = 46/85 (54%)
Query: 145 LKGHTKIVSALAVDHS-GSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGH--QVRN 201
L+GH +V A+A ++ G +V +GS+D T +++ + +FR GH ++
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAE-TGKCFYTFR------GHTAEIVC 182
Query: 202 LSWSPTSDRFLCVTGSAQ--AKIYD 224
L+++P S L TGS AK++D
Sbjct: 183 LAFNPQST--LVATGSMDTTAKLWD 205
Score = 73 (30.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 146 KGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGH--QVRNLS 203
+GHT + LA + + V +GS D T +++D ++S ++ GH ++ +L
Sbjct: 174 RGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD-------VESGEEVSTLAGHFAEIISLC 226
Query: 204 WSPTSDRFLCVTGS 217
++ T DR VTGS
Sbjct: 227 FNTTGDRL--VTGS 238
Score = 66 (28.3 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 22/85 (25%), Positives = 40/85 (47%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSW 204
L GH + +L + +G R+++GS+D+T ++D + S R++ GH+
Sbjct: 215 LAGHFAEIISLCFNTTGDRLVTGSFDHTAILWD-------VPSGRKVHVLSGHRGEISCV 267
Query: 205 SPTSDRFLCVTGSAQ--AKIYDRDG 227
D L T S K++D +G
Sbjct: 268 QFNWDCSLIATASLDKSCKVWDAEG 292
Score = 62 (26.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSW 204
L+ H ++ +A + SGS ++GSYD T +++D S +L EGH RN+ +
Sbjct: 88 LQAHILPLTNVAFNKSGSCFITGSYDRTCKIWD-------TASGEELHTLEGH--RNVVY 138
Query: 205 S 205
+
Sbjct: 139 A 139
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 151 (58.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 59/246 (23%), Positives = 111/246 (45%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRN 201
E LKGHT V + D +G+ + S S D T++++DFQ + + L + H V
Sbjct: 141 ERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDC----VKTLHGHD-HNVSC 195
Query: 202 LSWSPTSDRFLCVTGSAQAKIYDR-DGLTLGEFVKGDMYIRDLKNTKGHICGLTCGE--- 257
+ ++P+ D+ + + K+++ G + V + ++R + ++ C +C
Sbjct: 196 VRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQT 255
Query: 258 ---WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPK--LARP-GRVAVTTC-AWDCD 310
W+ E + T E + + F + + P L+ P G+ V +
Sbjct: 256 IKTWNIVKGECLATYREHS--HVVECLAFSTANIIDIPGSLLSTPEGKSKVKQGPGGNLV 313
Query: 311 GKC--IAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGS 368
G+C +A G D +I++W L G I GH + + A++F G+ LLS D +
Sbjct: 314 GQCGYLATGSRDKTIKIWELATGRCLATYI----GHDNWVRAVRFHPCGKFLLSVGDDKT 369
Query: 369 LKVWDL 374
++VWD+
Sbjct: 370 IRVWDI 375
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 130 (50.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 39/149 (26%), Positives = 73/149 (48%)
Query: 264 ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSI 323
+ + ++S+D +++IWD Q + R V + + D + +A D ++
Sbjct: 392 QLLASASDDSTVKIWDTGTGSLQHTL------EGHRDWVRSVIFSHDSQLLASASDDSTV 445
Query: 324 QVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRK--MKEPL 381
++W+ G GS H +GH D + ++ FS D R+L S S D ++++WD K K L
Sbjct: 446 KIWDT--GTGSLQ--HTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTL 501
Query: 382 KVFEDLPNNYAQTNVAFSPDEQLFLTGTS 410
+ L T+V+FS D +L + ++
Sbjct: 502 EGHSSLV-----TSVSFSHDSRLLASASN 525
Score = 124 (48.7 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 29/111 (26%), Positives = 58/111 (52%)
Query: 264 ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSI 323
+ + ++S+D +++IWD Q + R V + + D + +A D ++
Sbjct: 434 QLLASASDDSTVKIWDTGTGSLQHTL------EGHRDWVRSVIFSHDSRLLASASDDRTV 487
Query: 324 QVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
++W+ + G S H +GHS +T++ FS D R+L S S D ++++WD+
Sbjct: 488 RIWDTEKG--SHK--HTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDI 534
Score = 70 (29.7 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNL 202
L+GH V +++ H + S S D TV+++D + LQ EGH VR++
Sbjct: 292 LEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTE--TGSLQ-----HTLEGHSDLVRSV 344
Query: 203 SWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKG 236
+S S R L + KI+D +L ++G
Sbjct: 345 IFSHDS-RLLASASDSTVKIWDTGTGSLQHTLEG 377
Score = 45 (20.9 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 25/91 (27%), Positives = 40/91 (43%)
Query: 191 LEPSEGHQVRNLSWSPTSDRFLCVTGSAQ--AKIYDRDGLTLGEFVKGDMYIRDLKNTKG 248
L+ EGH+ LS S + D L + S KI+D + +L ++G DL +
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHS---DL--VRS 343
Query: 249 HICGLTCGEWHPKTKETILTSSEDGSLRIWD 279
I H +L S+ D +++IWD
Sbjct: 344 VIFS------HDSR---LLASASDSTVKIWD 365
>FB|FBgn0261119 [details] [associations]
symbol:Prp19 "Prp19" species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS;TAS]
[GO:0005681 "spliceosomal complex" evidence=ISS;TAS] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 EMBL:AE013599
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HSSP:P32523 OMA:QWQELKV FlyBase:FBgn0261119
EMBL:AF160906 RefSeq:NP_523783.1 UniGene:Dm.1432 SMR:Q7KLW9
IntAct:Q7KLW9 STRING:Q7KLW9 EnsemblMetazoa:FBtr0086723 GeneID:37123
KEGG:dme:Dmel_CG5519 UCSC:CG5519-RA CTD:321544 InParanoid:Q7KLW9
GenomeRNAi:37123 NextBio:802060 Uniprot:Q7KLW9
Length = 505
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/170 (26%), Positives = 85/170 (50%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
L+ +G + GL+ HP T + +L++S D + W ++ ++ + + K+ V +
Sbjct: 303 LRCHEGPVTGLSL---HP-TGDYLLSTSSD---KHWAFSDIRTGR--LLTKVIDTAEVGL 353
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
TT + DG G D +++W+LK + ++ GH+ I+A+ FS +G L +
Sbjct: 354 TTAQFHPDGLIFGTGTVDSQVKIWDLK----EQSNVANFPGHTGPISAISFSENGYYLAT 409
Query: 363 RSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPD-EQLFLTGTSV 411
+ D +K+WDLRK+K K + L + Y ++ F L + G+ V
Sbjct: 410 AADDACVKLWDLRKLKN-FKTIQ-LDDGYEVKDLCFDQSGTYLAIAGSDV 457
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 152 (58.6 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 40/142 (28%), Positives = 73/142 (51%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+GH+ G++ + P I + DG++++W + K + LA ++T +
Sbjct: 173 RGHLRGVSAVRFSPDAS-MIASGGADGAVKVWAASTGKLI-YTFEGHLA-----GISTIS 225
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFD 366
W DG IA G D +I++WN+ G + P + GH + + A+ FS G +L+S S+D
Sbjct: 226 WSPDGATIASGSDDKTIRLWNVLTG-KAHPTPFI--GHHNYVYAIAFSPKGNMLVSGSYD 282
Query: 367 GSLKVWDLRKMKEPLKVFEDLP 388
++ +WD+R + V + LP
Sbjct: 283 EAVFLWDVRSAR----VMKSLP 300
Score = 126 (49.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 42/165 (25%), Positives = 78/165 (47%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+GH+ G++ W P TI + S+D ++R+W+V K+ P + V A
Sbjct: 215 EGHLAGISTISWSPDGA-TIASGSDDKTIRLWNVLTGKAHPT---PFIGHHNYVYAI--A 268
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFD 366
+ G + G D ++ +W+++ S + HSD ++ + DG ++ S + D
Sbjct: 269 FSPKGNMLVSGSYDEAVFLWDVR----SARVMKSLPAHSDPVSGIDVVWDGTLIASCATD 324
Query: 367 GSLKVWDLRKMKEPLK--VFEDLPNNYAQTNVAFSPDEQLFLTGT 409
G +++WD + L+ V ED P ++V FSP+ + L T
Sbjct: 325 GLVRIWDT-STGQCLRTLVHEDNP---PVSSVKFSPNGKYVLAWT 365
Score = 116 (45.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 33/133 (24%), Positives = 67/133 (50%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQV 325
+++ S D ++ +WDV + K + P + P V+ WD G IA DG +++
Sbjct: 276 LVSGSYDEAVFLWDVRSARVMKSL--PAHSDP--VSGIDVVWD--GTLIASCATDGLVRI 329
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFE 385
W+ G R +H + + ++++KFS +G+ +L+ + D +++WD + + LK ++
Sbjct: 330 WDTSTGQCLRTLVHED---NPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVEGR-CLKTYQ 385
Query: 386 DLPNNYAQTNVAF 398
N + AF
Sbjct: 386 GHSNKKYSLSGAF 398
Score = 63 (27.2 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--V 199
+ +L+GH + VSA+ S + SG D V+++ + +F EGH +
Sbjct: 169 KFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWA-ASTGKLIYTF------EGHLAGI 221
Query: 200 RNLSWSP 206
+SWSP
Sbjct: 222 STISWSP 228
Score = 57 (25.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 20/80 (25%), Positives = 38/80 (47%)
Query: 146 KGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNLS 203
+GH +S ++ G+ + SGS D T+R+++ L P GH V ++
Sbjct: 215 EGHLAGISTISWSPDGATIASGSDDKTIRLWNV------LTGKAHPTPFIGHHNYVYAIA 268
Query: 204 WSPTSDRFLCVTGSAQAKIY 223
+SP + + V+GS ++
Sbjct: 269 FSPKGN--MLVSGSYDEAVF 286
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 152 (58.6 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 61/233 (26%), Positives = 109/233 (46%)
Query: 152 VSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGH--QVRNLSWSP--T 207
+S + +G V +G++ V+++ ++ + + R GH +V + W P T
Sbjct: 209 ISITRISPNGETVATGNWGGQVKLFSIPNLDETM-NLR------GHTNKVSGMCWFPGAT 261
Query: 208 SDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETIL 267
S +G + D + L +C + ++HP + +
Sbjct: 262 LQESNVSAESVNLATGGAEGQVNLWSLSQDTPLATLSGHTQRVCRV---DFHPSGR-FLA 317
Query: 268 TSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSI-QVW 326
++SED S R+WDV K + +++ +R G AV+ ++ DG +A G SI ++W
Sbjct: 318 SASEDTSWRLWDVE--KRTELLLQEGHSR-GVFAVS---FNGDGSLLASA-GQDSIGRIW 370
Query: 327 NLKPGWGSRP-DIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMK 378
+L+ G D H++ GH I AL + SDG +LS S DG +K WD+RK++
Sbjct: 371 DLRTGRTIMILDGHMD-GHIKPIYALDWGSDGHRVLSASADGWIKCWDVRKVQ 422
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 41/145 (28%), Positives = 71/145 (48%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA-WDCDGKCIAGGIGDGSIQ 324
I+++S+D +L++WDV K +I G C ++ I G D +++
Sbjct: 86 IVSASDDKTLKLWDVETGSLIKTLI-------GHTNYAFCVNFNPQSNMIVSGSFDETVR 138
Query: 325 VWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVF 384
+W++ G + V HSD +TA+ F+ DG +++S S+DG ++WD +K
Sbjct: 139 IWDVTTG----KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD-SGTGHCVKTL 193
Query: 385 EDLPNNYAQTNVAFSPDEQLFLTGT 409
D N + V FSP+ + L GT
Sbjct: 194 ID-DENPPVSFVRFSPNGKFILVGT 217
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 42/157 (26%), Positives = 75/157 (47%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
+K GH C ++P++ I++ S D ++RIWDV K K + P + P V
Sbjct: 106 IKTLIGHTNYAFCVNFNPQSN-MIVSGSFDETVRIWDVTTGKCLK--VLPAHSDP----V 158
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
T ++ DG I DG ++W+ G + I E + ++ ++FS +G+ +L
Sbjct: 159 TAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDE---NPPVSFVRFSPNGKFILV 215
Query: 363 RSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFS 399
+ D +L++W++ K LK + N + AFS
Sbjct: 216 GTLDNTLRLWNISSAKF-LKTYTGHVNAQYCISSAFS 251
Score = 99 (39.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 39/152 (25%), Positives = 69/152 (45%)
Query: 138 PMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGH 197
P + L H + VS++ G + S S D T+R Y +N + ++ GH
Sbjct: 13 PYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAE--PVQEFTGH 70
Query: 198 Q--VRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTC 255
+ + ++++S + RF+ V+ S D L L + G + +K GH C
Sbjct: 71 ENGISDVAFSSDA-RFI-VSAS------DDKTLKLWDVETGSL----IKTLIGHTNYAFC 118
Query: 256 GEWHPKTKETILTSSEDGSLRIWDVNEFKSQK 287
++P++ I++ S D ++RIWDV K K
Sbjct: 119 VNFNPQSN-MIVSGSFDETVRIWDVTTGKCLK 149
Score = 86 (35.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 24/111 (21%), Positives = 51/111 (45%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQV 325
IL + D +LR+W+++ K K A+ +++ +GK I G D + +
Sbjct: 213 ILVGTLDNTLRLWNISSAKFLKTYTGHVNAQ---YCISSAFSVTNGKRIVSGSEDNCVHM 269
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRK 376
W L S+ + +GH++ + + ++ S S D ++++W +K
Sbjct: 270 WELN----SKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKK 316
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 151 (58.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 48/137 (35%), Positives = 74/137 (54%)
Query: 243 LKNTKGHICGLTCG-EWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
L +GH G C E+HP K I ++S D + R+WDV E ++ Q ++ +R
Sbjct: 285 LATLEGH-SGRVCRTEFHPSGKY-IASASYDTTWRLWDV-ETTAELQ-LQEGHSRE---- 336
Query: 302 VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
V T A++ DG +A G D +VW+L+ G + + +GH +I L + DG +L
Sbjct: 337 VYTVAFNNDGSLLASGGLDSIGRVWDLRTG----RTVMILEGHIREIFGLDWGVDGYRVL 392
Query: 362 SRSFDGSLKVWDLRKMK 378
S S DG +K WDLR++K
Sbjct: 393 SGSGDGWVKCWDLRQVK 409
>CGD|CAL0004633 [details] [associations]
symbol:orf19.7343 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 150 (57.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 56/250 (22%), Positives = 119/250 (47%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGH--QVRNL 202
+ G T+ +S + + ++ + GS+D ++ + +NS+ S + PS H ++ L
Sbjct: 107 IPGTTRTISNIKISNNDKYIACGSWDGSINL-----LNSQDLSIFKKTPSGFHNEKISGL 161
Query: 203 SWSPTSDRFLCVTGSAQAKIYD----------RDGLTLGEFVKGDMYIRD-LKNTK-GHI 250
SW+ ++ + I++ + E + + + + + K H
Sbjct: 162 SWNNNDNQLVSGGNEGTINIWNVNENNNNNNNNNNNNNNEKDQNGLLLSSPIVSIKQAHN 221
Query: 251 CGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA-VTTCAWDC 309
+T +HP I+++S D + ++WD+N+ Q+ ++ + + G + T
Sbjct: 222 DRITKTLFHP-INNLIISTSFDQTWKLWDLNKLSGQRDDLQCLVEQEGHSKPIFTGEIHP 280
Query: 310 DGKC-IAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGS 368
DG ++GG+ DG + +W+L+ G R + ++K H + L +S +G ++ S D S
Sbjct: 281 DGGLFMSGGL-DGIVHIWDLRSG---RSIVTLQK-HMAGVYCLDWSPNGYQFVTGSGDCS 335
Query: 369 LKVWDLRKMK 378
LK+WDLRK++
Sbjct: 336 LKIWDLRKLE 345
>UNIPROTKB|Q5A3W6 [details] [associations]
symbol:PRP4 "Potential spliceosomal U4/U6 snRNP protein
Prp4p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 150 (57.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 56/250 (22%), Positives = 119/250 (47%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGH--QVRNL 202
+ G T+ +S + + ++ + GS+D ++ + +NS+ S + PS H ++ L
Sbjct: 107 IPGTTRTISNIKISNNDKYIACGSWDGSINL-----LNSQDLSIFKKTPSGFHNEKISGL 161
Query: 203 SWSPTSDRFLCVTGSAQAKIYD----------RDGLTLGEFVKGDMYIRD-LKNTK-GHI 250
SW+ ++ + I++ + E + + + + + K H
Sbjct: 162 SWNNNDNQLVSGGNEGTINIWNVNENNNNNNNNNNNNNNEKDQNGLLLSSPIVSIKQAHN 221
Query: 251 CGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA-VTTCAWDC 309
+T +HP I+++S D + ++WD+N+ Q+ ++ + + G + T
Sbjct: 222 DRITKTLFHP-INNLIISTSFDQTWKLWDLNKLSGQRDDLQCLVEQEGHSKPIFTGEIHP 280
Query: 310 DGKC-IAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGS 368
DG ++GG+ DG + +W+L+ G R + ++K H + L +S +G ++ S D S
Sbjct: 281 DGGLFMSGGL-DGIVHIWDLRSG---RSIVTLQK-HMAGVYCLDWSPNGYQFVTGSGDCS 335
Query: 369 LKVWDLRKMK 378
LK+WDLRK++
Sbjct: 336 LKIWDLRKLE 345
>UNIPROTKB|Q29HG9 [details] [associations]
symbol:GA15597 "Protein LST8 homolog" species:46245
"Drosophila pseudoobscura pseudoobscura" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH379064 KO:K08266 OMA:NNKGNCY OrthoDB:EOG473N6W
RefSeq:XP_001354734.1 ProteinModelPortal:Q29HG9 GeneID:4815233
KEGG:dpo:Dpse_GA15597 FlyBase:FBgn0075614 InParanoid:Q29HG9
Uniprot:Q29HG9
Length = 315
Score = 125 (49.1 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 48/158 (30%), Positives = 74/158 (46%)
Query: 259 HPKTKETILTSSEDGSLRIWDVNEFKSQK-QVIKPKLARPGRVAVTTCAWDCDGKCIAGG 317
HP E I S++G++ +WDV KS+K + I P++ ++ A DG +A
Sbjct: 130 HPNQVE-IGMGSQNGNVFLWDV---KSEKHECIVPEVD----ASIQDVAISPDGHYLAAA 181
Query: 318 IGDGSIQVWNL--KPGWGS---RPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVW 372
G+ +W+L P RP ++ H+ I KFS D R+LL+ S DG+ +W
Sbjct: 182 NNKGNCYIWSLCSSPDQKMSTMRPTKKIQ-AHTRYILRCKFSPDSRLLLTTSGDGTACLW 240
Query: 373 DLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTS 410
K + K E NY + AFS D + T +S
Sbjct: 241 ---KTSDFSKWRELCIENYWVWDAAFSADSKWLFTASS 275
Score = 65 (27.9 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 28/115 (24%), Positives = 50/115 (43%)
Query: 166 SGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSWSPTSDRFLCVTGSAQAKIYDR 225
+G YD+T++++ N +++ R +E S QV L +P R L G ++YD
Sbjct: 9 TGGYDHTIKVWQAHTGNC-IKTMRFVETS---QVNALDRTPDKTR-LAACGYQCIRLYDL 63
Query: 226 DGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDV 280
+ + D +++ G G W + T+ ED +RIWD+
Sbjct: 64 ESNCTAPVINFDGVQKNVTRL-GF---QEDGNW-------MFTAGEDHHVRIWDM 107
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 151 (58.2 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 39/137 (28%), Positives = 73/137 (53%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+GH + +HP + I TSS D S R+WD+ K ++ + G + ++
Sbjct: 384 EGHSDVVNRCSFHPCGRY-ITTSSNDKSWRLWDLES--GGKCLLDQEGHSDGVMGISI-- 438
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFD 366
DG +A G DG +++W+L+ G RP ++ + GHS + ++ +S +G L S S D
Sbjct: 439 -QSDGSLLATGSQDGLVRIWDLRSG---RPILYFQ-GHSKQVISVDWSPNGYQLASSSED 493
Query: 367 GSLKVWDLRKMKEPLKV 383
++ +WD+RK ++ ++
Sbjct: 494 NTVVIWDIRKKEQSCQI 510
Score = 124 (48.7 bits), Expect = 0.00029, P = 0.00029
Identities = 39/146 (26%), Positives = 67/146 (45%)
Query: 259 HPKTKETILTSSEDGSLRIWDV--------------NEFKSQKQVI----KPKLARPGRV 300
H K I T+S D + ++W + NE + + +P L+ G
Sbjct: 328 HTKNLVNIATTSADSTCKLWPLLNNDNNNNNNNNNDNEEEDNDATVSIETQPILSLEGHS 387
Query: 301 -AVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRI 359
V C++ G+ I D S ++W+L+ G D ++GHSD + + SDG +
Sbjct: 388 DVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLD---QEGHSDGVMGISIQSDGSL 444
Query: 360 LLSRSFDGSLKVWDLRKMKEPLKVFE 385
L + S DG +++WDLR + P+ F+
Sbjct: 445 LATGSQDGLVRIWDLRSGR-PILYFQ 469
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 146 (56.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 59/227 (25%), Positives = 100/227 (44%)
Query: 164 VLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSWSPTSDRFLCVTGS--AQAK 221
+++ S D +++++D LQ +++ E + V WS T L V+GS AK
Sbjct: 81 LITSSGDGSLQIWDIAKPKGPLQVYKE-HTQEAYSV---DWSQTRGEQLVVSGSWDQTAK 136
Query: 222 IYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVN 281
++D +G + L+ KGH + W P ++S D +LRIWDV
Sbjct: 137 LWDP---AVG---------KSLRTFKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDVK 184
Query: 282 EFKSQKQVIKPKLARPGRVAVTTCAWDC--DGKCIAGGIGDGSIQVWNLKPGWGSRPDIH 339
+ VI A + +C W C D + G D S++ W+L+ R +
Sbjct: 185 A-PGVRLVIPAHQAE-----ILSCDW-CKYDENLLVTGAVDCSLKGWDLR---NVRQPVF 234
Query: 340 VEKGHSDDITALKFSS-DGRILLSRSFDGSLKVWDLRKMKEPLKVFE 385
+ GH+ + +KFS +L S S+D +++ WD K L+ E
Sbjct: 235 ILLGHTYAVRRVKFSPFHATLLASCSYDFTVRFWDFSKPNPLLETVE 281
Score = 129 (50.5 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 43/159 (27%), Positives = 75/159 (47%)
Query: 257 EW-HPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIA 315
+W + ++ +++ S D + ++WD KS + K G + T + G C A
Sbjct: 116 DWSQTRGEQLVVSGSWDQTAKLWDPAVGKSLR-TFK---GHEGVIYSTIWSPHIPG-CFA 170
Query: 316 GGIGDGSIQVWNLKPGWGSRPDIH-VEKGHSDDITALKFSS-DGRILLSRSFDGSLKVWD 373
GD ++++W++K P + V H +I + + D +L++ + D SLK WD
Sbjct: 171 SASGDQTLRIWDVKA-----PGVRLVIPAHQAEILSCDWCKYDENLLVTGAVDCSLKGWD 225
Query: 374 LRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVE 412
LR +++P VF L + YA V FSP L S +
Sbjct: 226 LRNVRQP--VFILLGHTYAVRRVKFSPFHATLLASCSYD 262
>MGI|MGI:2142346 [details] [associations]
symbol:Strn4 "striatin, calmodulin binding protein 4"
species:10090 "Mus musculus" [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0051721 "protein phosphatase 2A binding"
evidence=ISO] [GO:0070016 "armadillo repeat domain binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2142346 GO:GO:0005737 GO:GO:0043234
GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043197 InterPro:IPR013258 Pfam:PF08232
GeneTree:ENSGT00520000055597 HOGENOM:HOG000236343
HOVERGEN:HBG007117 CTD:29888 EMBL:AF414080 EMBL:AC148981
EMBL:BC004025 EMBL:BC080283 IPI:IPI00119524 IPI:IPI01008021
RefSeq:NP_001034967.1 RefSeq:NP_598550.2 UniGene:Mm.21612
ProteinModelPortal:P58404 SMR:P58404 PhosphoSite:P58404
PaxDb:P58404 PRIDE:P58404 Ensembl:ENSMUST00000019220
Ensembl:ENSMUST00000108495 GeneID:97387 KEGG:mmu:97387
UCSC:uc009fif.2 InParanoid:P58404 OMA:RPHEGSF OrthoDB:EOG4R23TB
NextBio:352759 Bgee:P58404 CleanEx:MM_STRN4 Genevestigator:P58404
GermOnline:ENSMUSG00000030374 Uniprot:P58404
Length = 760
Score = 152 (58.6 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 66/233 (28%), Positives = 101/233 (43%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQV----IKPKLA-RPGRVA 301
+ H G+ +H ++ +LT+SEDG+L++W++ + + K+ ++P A R R
Sbjct: 442 RSHYDGIRSLAFH-HSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGP 500
Query: 302 VTTCAWDCDGK-CIAGGIGDGSIQVW-----NLKPGWGSRPDI--HVEKGHSDDITALKF 353
V + + C +GG D I W N+ P G P + HV +GH D + L F
Sbjct: 501 VLAVTMGSNSEYCYSGG-ADARIHSWKIPDLNMDPYDGYDPSVLSHVLEGHGDAVWGLAF 559
Query: 354 SSDGRILLSRSFDGSLKVWDLRKMKEP-LKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVE 412
S + L S S DG++++WD L F + T+VAF+ E +
Sbjct: 560 SPTSQRLASCSADGTVRIWDPSSSGPSCLCTFPMDGEHGIPTSVAFTSTEPAHVVA---- 615
Query: 413 RESTTGGLLCFYDREK----LELVSRVGISPACSVVQCAWHPKLNQIFATAGD 461
S G YD E L L SR PA + Q HP + TA D
Sbjct: 616 --SFRSGDTVLYDLEAGSALLTLESRGSSGPA-QINQVVSHPS-QPLTITAHD 664
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 155 (59.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 55/197 (27%), Positives = 90/197 (45%)
Query: 239 YIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPG 298
+I L+ GH+ + C +HP + +LT S D + R+WDV+ S + V +P
Sbjct: 452 HIYPLRVFAGHLSDVDCVTFHPNSAY-VLTGSSDKTCRLWDVHRGHSVR-VFNGH-TQP- 507
Query: 299 RVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGR 358
VT A DG +A +G I +W++ G G R I +GH +I +L FS +
Sbjct: 508 ---VTAVAIAPDGHTMASADSEGLIHLWDI--GTGRR--IKTMRGHRGNIYSLSFSREST 560
Query: 359 ILLSRSFDGSLKVWDLRKMK--EPLKV---------FEDLPNNYAQTNVAFSPDEQ--LF 405
+L+S D +++ WD+ K P+ F + + + N + SPD+ L+
Sbjct: 561 VLVSGGSDCTVRAWDVFKTNYNNPVSSSLTGSVVTPFSAKTSTFNEVNWSTSPDQMVALY 620
Query: 406 LTGTSVERESTTGGLLC 422
T + S T LC
Sbjct: 621 TKQTPIFNVSFTRRNLC 637
Score = 42 (19.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 143 IVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMY 176
+ KGHT V +A G + S+D T +++
Sbjct: 415 VAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLW 448
Score = 38 (18.4 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 222 IYDRDGLTLGEFVKGDMYIRDLK 244
I +++G+T F +GD ++ +K
Sbjct: 201 INEQEGITGQSFERGDAQLQPVK 223
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 154 (59.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 55/172 (31%), Positives = 87/172 (50%)
Query: 298 GRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDG 357
G + + + + DGK +A G D I++W+L ++ I + +GH DI +L F DG
Sbjct: 254 GDLYIRSVCFSPDGKLLATGAEDKLIRIWDLS----TKRIIKILRGHEQDIYSLDFFPDG 309
Query: 358 RILLSRSFDGSLKVWDLRKMKEPLKV-FEDLPNNYAQTNVAFSPDEQLFLTGTSVER--- 413
L+S S D S+++WDLR + L + ED T VA SPD +L G S++R
Sbjct: 310 DRLVSGSGDRSVRIWDLRTSQCSLTLSIED-----GVTTVAVSPDGKLIAAG-SLDRTVR 363
Query: 414 --ESTTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDKS 463
+STTG L+ E+L+ + G SV A+ QI + + D++
Sbjct: 364 VWDSTTGFLV-----ERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRT 410
Score = 144 (55.7 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 50/174 (28%), Positives = 83/174 (47%)
Query: 241 RDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV 300
R +K +GH + ++ P + +++ S D S+RIWD+ SQ + G
Sbjct: 288 RIIKILRGHEQDIYSLDFFPDG-DRLVSGSGDRSVRIWDLRT--SQCSLTLS--IEDG-- 340
Query: 301 AVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGW-GSRPDIHVEKG--HSDDITALKFSSDG 357
VTT A DGK IA G D +++VW+ G+ R D E G H D + ++ FS++G
Sbjct: 341 -VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNG 399
Query: 358 RILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQ--TNVAFSPDEQLFLTGT 409
+ S S D ++K+W L + E + +V +PD + L+G+
Sbjct: 400 EQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGS 453
Score = 40 (19.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 97 QQQEDDADSVMIGPPRPPA 115
QQQ+ ++ P PPA
Sbjct: 106 QQQQQQQQQIVAPPAAPPA 124
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 154 (59.3 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 55/172 (31%), Positives = 87/172 (50%)
Query: 298 GRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDG 357
G + + + + DGK +A G D I++W+L ++ I + +GH DI +L F DG
Sbjct: 254 GDLYIRSVCFSPDGKLLATGAEDKLIRIWDLS----TKRIIKILRGHEQDIYSLDFFPDG 309
Query: 358 RILLSRSFDGSLKVWDLRKMKEPLKV-FEDLPNNYAQTNVAFSPDEQLFLTGTSVER--- 413
L+S S D S+++WDLR + L + ED T VA SPD +L G S++R
Sbjct: 310 DRLVSGSGDRSVRIWDLRTSQCSLTLSIED-----GVTTVAVSPDGKLIAAG-SLDRTVR 363
Query: 414 --ESTTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDKS 463
+STTG L+ E+L+ + G SV A+ QI + + D++
Sbjct: 364 VWDSTTGFLV-----ERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRT 410
Score = 144 (55.7 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 50/174 (28%), Positives = 83/174 (47%)
Query: 241 RDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV 300
R +K +GH + ++ P + +++ S D S+RIWD+ SQ + G
Sbjct: 288 RIIKILRGHEQDIYSLDFFPDG-DRLVSGSGDRSVRIWDLRT--SQCSLTLS--IEDG-- 340
Query: 301 AVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGW-GSRPDIHVEKG--HSDDITALKFSSDG 357
VTT A DGK IA G D +++VW+ G+ R D E G H D + ++ FS++G
Sbjct: 341 -VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNG 399
Query: 358 RILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQ--TNVAFSPDEQLFLTGT 409
+ S S D ++K+W L + E + +V +PD + L+G+
Sbjct: 400 EQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGS 453
Score = 40 (19.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 97 QQQEDDADSVMIGPPRPPA 115
QQQ+ ++ P PPA
Sbjct: 106 QQQQQQQQQIVAPPAAPPA 124
>UNIPROTKB|G4N183 [details] [associations]
symbol:MGG_07465 "Periodic tryptophan protein 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001233 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 KO:K14558 InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
RefSeq:XP_003711369.1 ProteinModelPortal:G4N183
EnsemblFungi:MGG_07465T0 GeneID:2683385 KEGG:mgr:MGG_07465
Uniprot:G4N183
Length = 900
Score = 147 (56.8 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 42/165 (25%), Positives = 80/165 (48%)
Query: 249 HICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWD 308
H G+T ++ K + T+S DGS+R WD+ +++ + P R++ + A D
Sbjct: 384 HTSGVTACQF-AKKGNVLFTASLDGSIRAWDLIRYRNFRT-----FTAPTRLSFSCMAVD 437
Query: 309 CDGKCIAGGIGDG-SIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDG 367
G+ +A G D + +W+++ G + GH ++A+ F+ DG +L+S S+D
Sbjct: 438 PSGEVVAAGSLDSFDVHIWSVQTG----QLLDQLSGHEGPVSAVAFAPDGGLLVSGSWDK 493
Query: 368 SLKVWDL---RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
+ ++W + + EPL++ D+ +VA PD T
Sbjct: 494 TARIWSVFNRTQTSEPLQLQADV------LSVAVRPDSSQLAVST 532
Score = 140 (54.3 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 37/142 (26%), Positives = 72/142 (50%)
Query: 269 SSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV-AVTTCAWDCDGKCIAGGIGDGSIQVWN 327
+S+ G L +W E++S+ ++K + G ++ A+ DGK I DG ++VW+
Sbjct: 319 ASKLGQLLVW---EWQSESYILKQQ----GHFDSMNALAYSPDGKRIVTAADDGKLKVWD 371
Query: 328 LKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDL 387
++ G+ I H+ +TA +F+ G +L + S DGS++ WDL + + + F
Sbjct: 372 IESGFC----IVTFTEHTSGVTACQFAKKGNVLFTASLDGSIRAWDLIRYRN-FRTFT-A 425
Query: 388 PNNYAQTNVAFSPDEQLFLTGT 409
P + + +A P ++ G+
Sbjct: 426 PTRLSFSCMAVDPSGEVVAAGS 447
Score = 54 (24.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 140 SNEIVLK--GHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQ 179
S +LK GH ++ALA G R+++ + D ++++D +
Sbjct: 332 SESYILKQQGHFDSMNALAYSPDGKRIVTAADDGKLKVWDIE 373
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 145 (56.1 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 41/171 (23%), Positives = 77/171 (45%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
L+ GH + WHP K + ED ++R+W N+ + + V + L +
Sbjct: 7 LQTLTGHAGRVWSAAWHPGGK-LFASCGEDKTIRVW--NKSDTDRWVAQTVLTDGHTRTI 63
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
AW C G +A D ++ VW+ K G + +E GH +++ ++ +S G +L +
Sbjct: 64 RELAWSCCGHYLASASFDTTVAVWDKKSG-EFECNATLE-GHDNEVKSVTWSRSGNLLAT 121
Query: 363 RSFDGSLKVWDLRKMKEPLKVFEDLP--NNYAQT--NVAFSPDEQLFLTGT 409
S D S+ +W++ + +E + N + Q V + P E L + +
Sbjct: 122 CSRDKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQEDLLASAS 172
Score = 43 (20.2 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 447 AWHPKLNQIFATAGDKSQ 464
AWHP + + TA D +
Sbjct: 314 AWHPTVPGLLLTASDDGE 331
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 147 (56.8 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 65/240 (27%), Positives = 107/240 (44%)
Query: 137 IPMSNEIVLKGHTKIVSALA-VDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSE 195
IP+S +L GH VS+ V +R+++ S D T ++D R+ F PS
Sbjct: 147 IPVSR--ILTGHKGYVSSCQYVPDQETRLITSSGDQTCVLWDVT-TGQRISIFGGEFPS- 202
Query: 196 GHQVRNLSWS-PTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLT 254
GH LS S +S+ + V+GS A + D + + R ++ GH +
Sbjct: 203 GHTADVLSLSINSSNSNMFVSGSCDATVRLWD-IRIAS--------RAVRTYHGHEGDIN 253
Query: 255 CGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV--AVTTCAWDCDGK 312
++ P + T S+DG+ R++DV Q QV + R VT+ A+ G+
Sbjct: 254 SVKFFPDGQR-FGTGSDDGTCRLFDVRT-GHQLQVYSREPDRNDNELPTVTSIAFSISGR 311
Query: 313 CIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVW 372
+ G +G VW+ +++ H I+ L SSDG L + S+D +LK+W
Sbjct: 312 LLFAGYSNGDCYVWDTLLAEVVLNLGNLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIW 371
Score = 120 (47.3 bits), Expect = 0.00040, P = 0.00040
Identities = 52/198 (26%), Positives = 95/198 (47%)
Query: 223 YDR-DGLTLGEFVKGDMYI-RDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDV 280
Y R G T F D+ R L+ G + L +W P+ K I+++S+DG L +W
Sbjct: 40 YSRTQGRTPVSFNPTDLVCCRTLQGHSGKVYSL---DWTPE-KNWIVSASQDGRLIVW-- 93
Query: 281 NEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIA-GGIGDGSIQVWNLKPGW---GSRP 336
N SQK KL P V TCA+ +G+ +A GG+ D + ++NL G+ P
Sbjct: 94 NALTSQK-THAIKLHCPW---VMTCAFAPNGQSVACGGL-DSACSIFNLNSQADRDGNIP 148
Query: 337 DIHVEKGHSDDITALKFSSDGRI-LLSRSFDGSLKVWDLRKMKEPLKVFE-DLPNNYAQT 394
+ GH +++ ++ D L++ S D + +WD+ + + +F + P+ +
Sbjct: 149 VSRILTGHKGYVSSCQYVPDQETRLITSSGDQTCVLWDVTTGQR-ISIFGGEFPSGHTAD 207
Query: 395 NVAFS---PDEQLFLTGT 409
++ S + +F++G+
Sbjct: 208 VLSLSINSSNSNMFVSGS 225
Score = 118 (46.6 bits), Expect = 0.00066, P = 0.00066
Identities = 45/177 (25%), Positives = 83/177 (46%)
Query: 241 RDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV 300
R L KG++ +C ++ P + ++TSS D + +WDV Q+ I G
Sbjct: 151 RILTGHKGYVS--SC-QYVPDQETRLITSSGDQTCVLWDVTT--GQRISIFGGEFPSGHT 205
Query: 301 A--VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGR 358
A ++ + G D ++++W+++ SR + GH DI ++KF DG+
Sbjct: 206 ADVLSLSINSSNSNMFVSGSCDATVRLWDIRIA--SRA-VRTYHGHEGDINSVKFFPDGQ 262
Query: 359 ILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQ-----TNVAFSPDEQLFLTGTS 410
+ S DG+ +++D+R + L+V+ P+ T++AFS +L G S
Sbjct: 263 RFGTGSDDGTCRLFDVRTGHQ-LQVYSREPDRNDNELPTVTSIAFSISGRLLFAGYS 318
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 132 (51.5 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 44/152 (28%), Positives = 78/152 (51%)
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIG 319
P +K I T S G + I+ V K + L G+ + + A+ DGK +A G
Sbjct: 116 PDSKY-IATGSHLGKVNIFGVESGKKEHS-----LDTRGKF-ILSIAYSPDGKYLASGAI 168
Query: 320 DGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKE 379
DG I ++++ G +H +GH+ I +L FS D ++L++ S DG +K++D++
Sbjct: 169 DGIINIFDIATG----KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN- 223
Query: 380 PLKVFEDLPNNYAQT-NVAFSPDEQLFLTGTS 410
+ L + + +VAFSPD+ F++ +S
Sbjct: 224 ---LAGTLSGHGSWVLSVAFSPDDTHFVSSSS 252
Score = 115 (45.5 bits), Expect = 0.00094, P = 0.00094
Identities = 38/125 (30%), Positives = 63/125 (50%)
Query: 301 AVTTCAW---DCDG-KCIAGGIGDGSIQVWNLKPGWGSRPDIHVE---KGHSDDITALKF 353
A+ T AW + DG + I G D ++VW W S + ++ +GH + ++
Sbjct: 18 AIWTAAWGRSEKDGSETIVTGSLDDLVKVWK----W-SDEKLELQWTLEGHQLGVVSVNI 72
Query: 354 SSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
S +G I S S D +++WDL K+ +K + P + A T VAFSPD + TG+ + +
Sbjct: 73 SQNGAIAASSSLDAHIRLWDLETGKQ-IKSMDAGPVD-AWT-VAFSPDSKYIATGSHLGK 129
Query: 414 ESTTG 418
+ G
Sbjct: 130 VNIFG 134
Score = 55 (24.4 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 20/78 (25%), Positives = 40/78 (51%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSW 204
L+GH V ++ + +G+ S S D +R++D + +++S P + V ++
Sbjct: 60 LEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLE-TGKQIKSM-DAGPVDAWTV---AF 114
Query: 205 SPTSDRFLCVTGSAQAKI 222
SP S +++ TGS K+
Sbjct: 115 SPDS-KYIA-TGSHLGKV 130
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 146 (56.5 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 69/280 (24%), Positives = 116/280 (41%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRL--QSFRQLEPSEGHQVRNL 202
LK K + +L+ +H GS ++S D ++++ N +L SF L + +R +
Sbjct: 10 LKASNKRLWSLSWNHKGSVLISSGEDRVIKLW--AKCNDQLWGSSF-SLPEAHKKSIRCV 66
Query: 203 SWSPTSDRFLCVTGSAQAKIYDRDG-LTLGEFVKGDMY--IRDLKNTKGHICGLTCGEWH 259
+WSP C T A A DG +T+ + + + L + +GH + C W
Sbjct: 67 TWSP------CGTYIASASF---DGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWC 117
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIG 319
P + I T D S+ +W EF ++ V + +P V + AW G+ +
Sbjct: 118 P-SGHLIATCGRDKSVWLW---EFDDEEDVQCVSVLQPHSQDVKSVAWHPHGEVLVSTSY 173
Query: 320 DGSIQVWNLK-PGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKM- 377
D I V+ + W + GH + +FS G IL S S D +K+W +
Sbjct: 174 DNKINVYREELDDWTVFAQL---SGHDSTVWKAEFSPSGDILASCSDDLCVKLWSWEGVC 230
Query: 378 --KEPLKVFEDLPNNYAQT--NVAFSPDEQLFLTGTSVER 413
L + +T ++ +SPD QL + S R
Sbjct: 231 GKSSSWMCIATLSGYHTRTIFDLNWSPDSQLLASCGSDNR 270
>UNIPROTKB|B4LS78 [details] [associations]
symbol:GJ17641 "Ribosome biogenesis protein WDR12 homolog"
species:7244 "Drosophila virilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH940649 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_002052609.1 ProteinModelPortal:B4LS78 STRING:B4LS78
EnsemblMetazoa:FBtr0233566 GeneID:6629233 KEGG:dvi:Dvir_GJ17641
FlyBase:FBgn0204810 InParanoid:B4LS78 Uniprot:B4LS78
Length = 419
Score = 147 (56.8 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 59/252 (23%), Positives = 121/252 (48%)
Query: 141 NEIVLKGHT---KIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGH 197
+++ + GHT K V +++D R +S S D T ++ + ++ ++ + +GH
Sbjct: 136 HKLTIPGHTAPIKAVDWISMDDENGRFVSTSQDQTAMLWQWNIASNAVEC---VSVCKGH 192
Query: 198 Q--VRNLSWSPTSDRFLCVTGSAQAKIYDR--DGLTLG--EFVKGDMYIRDLKNT-KGHI 250
+ V ++ SP + RF + KI+ D + G + VK + +R K T +GH
Sbjct: 193 ERGVDSVCVSPDAQRFATGSWDTMLKIWSAGLDDTSEGTAKRVK-ESGVRTPKMTLQGHR 251
Query: 251 CGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCD 310
++ +W T T++T S D +L++WD+ Q + IK +++ ++ ++
Sbjct: 252 ESISAVQWMDAT--TLVTGSWDHTLKVWDL-----QLEGIKTEIST--NKSIFDASYSKL 302
Query: 311 GKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL-LSRSFDGSL 369
+ I D ++++++ + GS + GH+ + + +S+ L +S S+D
Sbjct: 303 NRLIVTASADKNLRLYDARTNQGSVVR-NTYLGHNAWVQTVMWSNTEEFLFVSGSYDTQN 361
Query: 370 KVWDLRKMKEPL 381
K+WD R K PL
Sbjct: 362 KLWDCRSPKAPL 373
Score = 117 (46.2 bits), Expect = 0.0010, P = 0.0010
Identities = 68/287 (23%), Positives = 124/287 (43%)
Query: 134 RHQIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEP 193
R P + +L H VSA V G +L+G YD T+ ++ +G + +L P
Sbjct: 92 RFPAPEPQDCLL--HDDWVSA--VKACGKWILTGCYDNTINIWTNKGKH-KLTI-----P 141
Query: 194 SEGHQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGL 253
++ + W D G + D+ + L ++ + + KGH G+
Sbjct: 142 GHTAPIKAVDWISMDDE----NGRFVSTSQDQTAM-LWQWNIASNAVECVSVCKGHERGV 196
Query: 254 TCGEWHPKTKETILTSSEDGSLRIW-----DVNE--FKSQKQ--VIKPKLARPG-RVAVT 303
P + T S D L+IW D +E K K+ V PK+ G R +++
Sbjct: 197 DSVCVSPDAQR-FATGSWDTMLKIWSAGLDDTSEGTAKRVKESGVRTPKMTLQGHRESIS 255
Query: 304 TCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR 363
W D + G D +++VW+L+ G + +I K D +S R++++
Sbjct: 256 AVQW-MDATTLVTGSWDHTLKVWDLQLE-GIKTEISTNKSIFD----ASYSKLNRLIVTA 309
Query: 364 SFDGSLKVWDLRKMKEPLKVFEDLPNN-YAQTNVAFSPDEQLFLTGT 409
S D +L+++D R + + L +N + QT + + +E LF++G+
Sbjct: 310 SADKNLRLYDARTNQGSVVRNTYLGHNAWVQTVMWSNTEEFLFVSGS 356
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 147 (56.8 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 52/233 (22%), Positives = 101/233 (43%)
Query: 184 RLQSFRQLEPSEGHQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIR-D 242
++Q +Q+ +G +V + P + F+ T + A++Y D D D
Sbjct: 115 KVQIIQQIN-HDG-EVNRARYMPQNP-FIIATKTVNAEVYVFDYSKHPSKPPLDGACNPD 171
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
LK +GH W + +L+ S+D + +WD+N K + ++ + V
Sbjct: 172 LK-LRGHSSEGYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVV 230
Query: 303 TTCAWDCDGKCIAGGIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGR-IL 360
AW + + G +GD + +W+L+ S+P + HS ++ L F+ ++
Sbjct: 231 EDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKP-VQSVVAHSMEVNCLAFNPFNEWVV 289
Query: 361 LSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
+ S D ++K++DLRK+ L F+ Q V ++P + L + R
Sbjct: 290 ATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQ--VGWNPKNETILASCCLGR 340
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 149 (57.5 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 46/146 (31%), Positives = 70/146 (47%)
Query: 296 RPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSS 355
R G + V + A+ DGK +A G+ D I++W++ + + GH +I +L FS
Sbjct: 343 REGDLYVRSVAFSPDGKYLATGVEDQQIRIWDI----AQKRVYRLLTGHEQEIYSLDFSK 398
Query: 356 DGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT--SVER 413
DG+ L+S S D ++ +WD+ ++ L + D T V FSPD Q G+ V R
Sbjct: 399 DGKTLVSGSGDRTVCLWDVEAGEQKLILHTD----DGVTTVMFSPDGQFIAAGSLDKVIR 454
Query: 414 ESTTGGLLCFYDREKLELVSRVGISP 439
T+ G L E V V SP
Sbjct: 455 IWTSSGTLVEQLHGHEESVYSVAFSP 480
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/145 (27%), Positives = 75/145 (51%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQV 325
+ T ED +RIWD+ +QK+V + L + + + DGK + G GD ++ +
Sbjct: 361 LATGVEDQQIRIWDI----AQKRVYR--LLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCL 414
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLR-KMKEPLKVF 384
W+++ G + +H + G +T + FS DG+ + + S D +++W + E L
Sbjct: 415 WDVEAG-EQKLILHTDDG----VTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGH 469
Query: 385 EDLPNNYAQTNVAFSPDEQLFLTGT 409
E+ + Y+ VAFSPD + ++G+
Sbjct: 470 EE--SVYS---VAFSPDGKYLVSGS 489
Score = 133 (51.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 37/116 (31%), Positives = 64/116 (55%)
Query: 261 KTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGD 320
K +T+++ S D ++ +WDV E QK ++ G VTT + DG+ IA G D
Sbjct: 398 KDGKTLVSGSGDRTVCLWDV-EAGEQKLILHTD---DG---VTTVMFSPDGQFIAAGSLD 450
Query: 321 GSIQVWNLKPGWGSRPD-IHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLR 375
I++W G+ + +H GH + + ++ FS DG+ L+S S D ++K+W+L+
Sbjct: 451 KVIRIWTSS---GTLVEQLH---GHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQ 500
>FB|FBgn0034931 [details] [associations]
symbol:CG2812 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 Gene3D:2.130.10.10 SUPFAM:SSF50978
HSSP:P16649 GeneTree:ENSGT00550000074331 RefSeq:NP_611850.1
UniGene:Dm.11826 ProteinModelPortal:Q9W1G4 SMR:Q9W1G4
MINT:MINT-845989 STRING:Q9W1G4 PRIDE:Q9W1G4
EnsemblMetazoa:FBtr0072140 GeneID:37801 KEGG:dme:Dmel_CG2812
UCSC:CG2812-RA FlyBase:FBgn0034931 InParanoid:Q9W1G4 OMA:HRGSIYC
OrthoDB:EOG4QJQ3T PhylomeDB:Q9W1G4 GenomeRNAi:37801 NextBio:805473
ArrayExpress:Q9W1G4 Bgee:Q9W1G4 Uniprot:Q9W1G4
Length = 348
Score = 145 (56.1 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 67/283 (23%), Positives = 119/283 (42%)
Query: 146 KGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFR-QLEPSEGHQVRNLSW 204
K H + G + +GS D T++ F ++L +L +G VR++ +
Sbjct: 83 KHHRGSIYCTCWSRDGELIATGSNDKTIKYMRFNNDTNQLVGHEMELNMHDG-TVRDMCF 141
Query: 205 ---SPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPK 261
S T R L G+ KIY D T F Y GHI L W+
Sbjct: 142 LDDSSTKSRLLASGGAGDCKIYITDCGTGTPF---QAY----SGHTGHILSLY--SWN-- 190
Query: 262 TKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV---AVTTCAWDCDGKCIAGGI 318
++ S+D ++R WD+ S + + + G + AVT D G+ + G
Sbjct: 191 -NAMFVSGSQDQTIRFWDLRVNVSVNTLDNDR--KDGGLESSAVTAVCVDPTGRLLVSGH 247
Query: 319 GDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLR-KM 377
D S +++++ G+RP I H+ +I ++FS +L+ S+D S+++ DL+ +
Sbjct: 248 ADSSCTLYDIR---GNRP-IQRFYPHTAEIRCVRFSPSAYYMLTCSYDNSIRLTDLQGDL 303
Query: 378 KEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGL 420
L + + + P E F++ TS ++ +T L
Sbjct: 304 AHELSSVVVAEHKDKAITIRWHPTEFSFIS-TSADKTATLWAL 345
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 149 (57.5 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 41/141 (29%), Positives = 71/141 (50%)
Query: 269 SSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNL 328
SS+ G L +W E++S+ V+K + A++T + DG+ I G DG I+VW++
Sbjct: 315 SSKLGQLLVW---EWQSESYVLKQQSHYD---ALSTLQYSSDGQRIITGADDGKIKVWDM 368
Query: 329 KPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLP 388
G+ I H+ ++ L FS G +L S S DGS++ WDL + + + F P
Sbjct: 369 NSGFC----IVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRN-FRTFT-AP 422
Query: 389 NNYAQTNVAFSPDEQLFLTGT 409
+ + +A P ++ G+
Sbjct: 423 SRVQFSCIAVDPSGEIVCAGS 443
Score = 145 (56.1 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 39/142 (27%), Positives = 69/142 (48%)
Query: 261 KTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGD 320
K + +SS DGS+R WD+ +++ + P RV + A D G+ + G D
Sbjct: 391 KRGNVLFSSSLDGSVRAWDLIRYRNFRT-----FTAPSRVQFSCIAVDPSGEIVCAGSQD 445
Query: 321 G-SIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKE 379
I +W+++ G + GH +++L F+S G +L S S+D ++++WD+
Sbjct: 446 SFEIFMWSVQTG----QLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVRIWDIFSRSG 501
Query: 380 PLKVFEDLPNNYAQTNVAFSPD 401
+ E LP ++AF PD
Sbjct: 502 ---IVEPLPIPSDVLSLAFHPD 520
Score = 54 (24.1 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 140 SNEIVLK--GHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNS 183
S VLK H +S L G R+++G+ D ++++D MNS
Sbjct: 328 SESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVWD---MNS 370
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 147 (56.8 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 50/173 (28%), Positives = 86/173 (49%)
Query: 297 PGR-VAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSS 355
P R + V T A+ DGK + G D I++W+L ++ +V GH DI +L FS
Sbjct: 357 PSRDLYVRTIAFSPDGKYLVTGTEDRQIKLWDLS----TQKVRYVFSGHEQDIYSLDFSH 412
Query: 356 DGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT--SVER 413
+GR ++S S D + ++WD+ + LK+ ++ N T +A SP++Q G+ + R
Sbjct: 413 NGRFIVSGSGDRTARLWDVETGQCILKL--EIENGV--TAIAISPNDQFIAVGSLDQIIR 468
Query: 414 E-STTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDKSQG 465
S +G L+ + K E V + SP S++ K +++ +S G
Sbjct: 469 VWSVSGTLVERLEGHK-ESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVG 520
Score = 119 (46.9 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 43/153 (28%), Positives = 79/153 (51%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQV 325
I++ S D + R+WDV ++ + ++K ++ VT A + + IA G D I+V
Sbjct: 417 IVSGSGDRTARLWDV---ETGQCILKLEIEN----GVTAIAISPNDQFIAVGSLDQIIRV 469
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMK------- 378
W++ G+ + +E GH + + ++ FS D ILLS S D ++KVW+L+ +
Sbjct: 470 WSVS---GTLVE-RLE-GHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAI 524
Query: 379 EPLKVFEDLPNNYAQ--TNVAFSPDEQLFLTGT 409
+P + + + +VA SPD + L+G+
Sbjct: 525 KPEGICKATYTGHTDFVLSVAVSPDSRWGLSGS 557
Score = 96 (38.9 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 31/115 (26%), Positives = 53/115 (46%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQK-QVIKP----KLARPGRVA-VTTCAWDCDGKCIAGGIG 319
+L+ S D ++++W++ +S IKP K G V + A D + G
Sbjct: 499 LLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSK 558
Query: 320 DGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
D S+Q W+L+ G +GH + + ++ FS DGR S S D ++W +
Sbjct: 559 DRSMQFWDLQTG----QSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSI 609
Score = 82 (33.9 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 29/94 (30%), Positives = 49/94 (52%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLS 203
V GH + + +L H+G ++SGS D T R++D + Q +LE G V ++
Sbjct: 397 VFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETG----QCILKLEIENG--VTAIA 450
Query: 204 WSPTSDRFLCVTGSAQA-KIYDRDGLTLGEFVKG 236
SP +D+F+ V Q +++ G TL E ++G
Sbjct: 451 ISP-NDQFIAVGSLDQIIRVWSVSG-TLVERLEG 482
Score = 59 (25.8 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 28/129 (21%), Positives = 53/129 (41%)
Query: 148 HTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQL--EPSEGHQVRNLSWS 205
H +V + ++G + +G + ++D Q +L + + +PS VR +++S
Sbjct: 312 HPSVVCCVKFSNNGKYLATGC-NQAANVFDVQ-TGKKLFTLHEESPDPSRDLYVRTIAFS 369
Query: 206 PTSDRFLCVTGSAQAKIYDRDGLTLGEFVKG---DMYIRDLK-NTKGHICGL---TCGEW 258
P + T Q K++D + G D+Y D N + + G T W
Sbjct: 370 PDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLW 429
Query: 259 HPKTKETIL 267
+T + IL
Sbjct: 430 DVETGQCIL 438
Score = 48 (22.0 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 18/69 (26%), Positives = 30/69 (43%)
Query: 4 PFTFGKQAKSQTPLEKIHNATRRSDPLTTTTAATDNEKNNLPSISSSSKEWLGTLR-NPK 62
P +G SQ P ++ + +P T+ A + + +P+ ++ S E T N
Sbjct: 197 PVNYGANQVSQQPNPQLPGVSNYYNPSATSKPAVNVQPPRIPTKATPSAEPSMTASANAG 256
Query: 63 S-SDAAPIG 70
S S A P G
Sbjct: 257 SISQAGPDG 265
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 146 (56.5 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 62/279 (22%), Positives = 124/279 (44%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRN 201
E LKGHT V ++ D +G + S S D T++++DFQG + R + + H V +
Sbjct: 143 ERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGF----ECIRTMHGHD-HNVSS 197
Query: 202 LSWSPTSDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLK-NTKGHICGLTCGEWH 259
++ P D + + K+++ G + F ++R ++ N G + +C +
Sbjct: 198 VAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLA-SCS--N 254
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIK--PKLARPGRVAVTTCAWDCDGK---CI 314
+T + ++++ ++ E + + I P+ A P T GK +
Sbjct: 255 DQTVRVWVVATKECKA---ELREHEHVVECISWAPESAHPTISEATGSENKKSGKPGPFL 311
Query: 315 AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
G D +I++W++ G + GH + + + F GR ++S + D +L++WD
Sbjct: 312 LSGSRDKTIKMWDISTGMCLMTLV----GHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
K K +K + + T++ F +TG SV++
Sbjct: 368 -KNKRCMKTLS--AHEHFVTSLDFHKASPYVVTG-SVDQ 402
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 147 (56.8 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 48/157 (30%), Positives = 84/157 (53%)
Query: 257 EWHPKTK----ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGK 312
E + KTK E +++ S+D ++ +W+ + K K+ +L ++ V + DGK
Sbjct: 319 ERYNKTKGDSPERLVSGSDDFTMFLWEPSVSKQPKK----RLTGHQQL-VNHVYFSPDGK 373
Query: 313 CIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVW 372
IA D S+++WN G + V +GH + + +S+D R+LLS S D +LK+W
Sbjct: 374 WIASASFDKSVRLWNGITG----QFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIW 429
Query: 373 DLRKMKEPLKVFEDLPNNYAQT-NVAFSPDEQLFLTG 408
++R K LK +DLP + + V +SPD + ++G
Sbjct: 430 EIRTKK--LK--QDLPGHADEVFAVDWSPDGEKVVSG 462
>UNIPROTKB|B4JPT9 [details] [associations]
symbol:GH13339 "Ribosome biogenesis protein WDR12 homolog"
species:7222 "Drosophila grimshawi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH916372 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001992994.1 ProteinModelPortal:B4JPT9 STRING:B4JPT9
EnsemblMetazoa:FBtr0148753 GeneID:6566798 KEGG:dgr:Dgri_GH13339
FlyBase:FBgn0120815 InParanoid:B4JPT9 Uniprot:B4JPT9
Length = 419
Score = 146 (56.5 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 63/258 (24%), Positives = 117/258 (45%)
Query: 143 IVLKGHT---KIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ- 198
+ + GHT K V L++D R +S S D T ++ + N + + +GH+
Sbjct: 138 LTIPGHTAPIKAVDWLSLDEVNGRFVSTSQDQTAMLWQW---NIDSNAVDCVSVCKGHER 194
Query: 199 -VRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKG------DMYIRDLKNT-KGHI 250
V +++ SP + RF + K++ + L + V+G + +R K T +GH
Sbjct: 195 SVDSVAVSPDAQRFATGSWDTMLKLWSAE---LEDAVEGSAKRAKESGVRTPKMTLQGHR 251
Query: 251 CGLTCGEWHPKTKETILTSSEDGSLRIWDVN------EFKSQKQVIKPKLARPGRVAVTT 304
++ +W T T+LT S D +L++WD+N E + K + ++ R+ VT
Sbjct: 252 ESISAVQWMDGT--TLLTGSWDHTLKVWDLNLEGIKTEISTNKSIFDANFSKLNRLIVTA 309
Query: 305 CAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL-LSR 363
A D ++++++ + GS + GH+ + + +S+ L +S
Sbjct: 310 SA-------------DKNLRLYDPRTNQGSVVR-NTYLGHNAWVQTVMWSTTEEFLFVSG 355
Query: 364 SFDGSLKVWDLRKMKEPL 381
S+D K+WD R K PL
Sbjct: 356 SYDNQNKLWDCRSPKAPL 373
>MGI|MGI:2144041 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001496 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082
PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253 SMART:SM00320
SMART:SM00969 UniPathway:UPA00143 MGI:MGI:2144041
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 EMBL:CH466529 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:AF033188 EMBL:AF072881 EMBL:AK157999 EMBL:BC055100
IPI:IPI00556687 RefSeq:NP_067514.2 UniGene:Mm.28489
ProteinModelPortal:O54929 SMR:O54929 STRING:O54929
PhosphoSite:O54929 PRIDE:O54929 Ensembl:ENSMUST00000031309
GeneID:59043 KEGG:mmu:59043 NextBio:314658 Bgee:O54929
CleanEx:MM_WSB2 Genevestigator:O54929 GermOnline:ENSMUSG00000029364
Uniprot:O54929
Length = 404
Score = 145 (56.1 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 63/226 (27%), Positives = 104/226 (46%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
L N GH + + P ++++S D +LRIWD+N+ Q QV+ L V
Sbjct: 146 LLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQW---VYC 202
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
+ + DC C A G + S+ +W+++ S I +GH + + FS D +L++
Sbjct: 203 CSISPDCSMLCSAAG--EKSVFLWSMR----SYTLIRKLEGHQSSVVSCDFSPDSALLVT 256
Query: 363 RSFDGSLKVWD------LRKMK----EPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVE 412
S+D S+ +WD LR + EP D+ + ++ V FSP E L+L + +
Sbjct: 257 ASYDTSVIMWDPYTGERLRSLHHTQLEPTMDDSDVHMSSLRS-VCFSP-EGLYLATVADD 314
Query: 413 RESTTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFAT 458
R LL + LEL + V +P + + C + P I AT
Sbjct: 315 R------LLRIW---ALELKAPVAFAPMTNGLCCTFFPH-GGIIAT 350
>RGD|1307030 [details] [associations]
symbol:Strn4 "striatin, calmodulin binding protein 4"
species:10116 "Rattus norvegicus" [GO:0008150 "biological_process"
evidence=ND] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0032403 "protein complex binding"
evidence=ISO;IPI] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0051721 "protein
phosphatase 2A binding" evidence=ISO] [GO:0070016 "armadillo repeat
domain binding" evidence=ISO] [GO:0000159 "protein phosphatase type
2A complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307030 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043197 InterPro:IPR013258
Pfam:PF08232 GeneTree:ENSGT00520000055597 CTD:29888 OMA:RPHEGSF
IPI:IPI00213355 RefSeq:NP_001100950.2 UniGene:Rn.137083
ProteinModelPortal:F1M6V8 PRIDE:F1M6V8 Ensembl:ENSRNOT00000021976
GeneID:308392 KEGG:rno:308392 UCSC:RGD:1307030 NextBio:658751
ArrayExpress:F1M6V8 Uniprot:F1M6V8
Length = 759
Score = 149 (57.5 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 68/235 (28%), Positives = 105/235 (44%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQV----IKPKLA-RPGRVA 301
+ H G+ +H ++ +LT+SEDG+L++W++ + + K+ ++P A R R
Sbjct: 441 RSHYDGIRSLAFH-HSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAHRGP 499
Query: 302 VTTCAWDCDGK-CIAGGIGDGSIQVW-----NLKPGWGSRPDIH--VEKGHSDDITALKF 353
V + + C +GG D I W N+ P G P + V +GH D + L F
Sbjct: 500 VLAVTMGSNSEYCYSGG-ADARIHSWKIPDLNMDPYDGYDPSVLSCVLEGHGDAVWGLAF 558
Query: 354 SSDGRILLSRSFDGSLKVWDLRKMKEP-LKVFEDLPNNYAQTNVAFSPDEQL-----FLT 407
S + L S S DG++++WD L F + T+VAF+ E F +
Sbjct: 559 SPTSQRLASCSADGTIRIWDPSSSGSSCLCTFPMAGEHGIPTSVAFTSTEPAHVVASFRS 618
Query: 408 GTSVERESTTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQ-IFATAGD 461
G +V + GG L L L SR G S + Q HP NQ + TA D
Sbjct: 619 GDTVLYDLEAGGAL-------LTLESR-GSSGPTQINQVVSHP--NQPLTITAHD 663
Score = 101 (40.6 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 43/199 (21%), Positives = 86/199 (43%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQ-GMNSRLQSFRQLEPSEG---H 197
+ L+ H + +LA HS S +L+ S D T+++++ Q + ++ + +EP H
Sbjct: 437 KFTLRSHYDGIRSLAFHHSQSALLTASEDGTLKLWNLQKAVTAKKNAALDVEPIHAFRAH 496
Query: 198 QVRNLSWSPTSDRFLCVTGSAQAKIYDRD--GLTLGEFVKGDMYIRDLKNTKGH---ICG 252
+ L+ + S+ C +G A A+I+ L + + D + +GH + G
Sbjct: 497 RGPVLAVTMGSNSEYCYSGGADARIHSWKIPDLNMDPYDGYDPSVLSCV-LEGHGDAVWG 555
Query: 253 LTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGK 312
L + P T + + + S DG++RIWD + S P G + + +
Sbjct: 556 LA---FSP-TSQRLASCSADGTIRIWDPSSSGSSCLCTFPMAGEHG-IPTSVAFTSTEPA 610
Query: 313 CIAGGIGDGSIQVWNLKPG 331
+ G +++L+ G
Sbjct: 611 HVVASFRSGDTVLYDLEAG 629
Score = 68 (29.0 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 338 IHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
+H H D +T L +G L+S S D SL++W L
Sbjct: 678 VHSMVAHLDAVTCLAVDPNGVFLMSGSHDCSLRLWSL 714
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 143 (55.4 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 69/278 (24%), Positives = 115/278 (41%)
Query: 195 EGHQ--VRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICG 252
EGH+ VR ++WSP RFL G++ +D ++ E K ++ + + +GH
Sbjct: 66 EGHEKTVRRVAWSPCG-RFLA--GAS----FDAS-TSIWEKSKDELEFTHVSSLEGHTYE 117
Query: 253 LTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA-WDCDG 311
+ W T + T S D S+ IW + + + + + G C W +
Sbjct: 118 VKSVAWD-STGTLLATCSRDKSIWIWQMED-DNDFECLS---INSGHGQDIKCVLWHPNE 172
Query: 312 KCIAGGIGDGSIQVW-NLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLK 370
+ +A D +I+ W ++ W I+ GH I L F+ DG L+S D +
Sbjct: 173 ELLASSSYDDTIKFWKDIDGDWEC---INTLTGHESSIWDLAFNKDGDKLVSCGEDKLVL 229
Query: 371 VWDLRKMKEP-LKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDREKL 429
W K E + +F+ N + +S D LT T V + + FY++E
Sbjct: 230 FWKFDKENEKWINIFKFKNEN---SRPIYSIDWSS-LTNTIVTGSADDS--IIFYEQESD 283
Query: 430 ELVSRVGI-----SPACSVVQCA-WHPKLNQIFATAGD 461
+ + I + S V C W+PK I A+ GD
Sbjct: 284 DTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASCGD 321
Score = 130 (50.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 34/140 (24%), Positives = 63/140 (45%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSW 204
L GH + LA + G +++S D V + F N + + + + + ++ W
Sbjct: 200 LTGHESSIWDLAFNKDGDKLVSCGEDKLVLFWKFDKENEKWINIFKFKNENSRPIYSIDW 259
Query: 205 SPTSDRFLCVTGSAQAKI--YDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKT 262
S ++ VTGSA I Y+++ D Y LK H + C +W+PK
Sbjct: 260 SSLTNTI--VTGSADDSIIFYEQESDDTP-----DKYKIILKKKNAHDSDVNCTKWNPKF 312
Query: 263 KETILTSSEDGSLRIWDVNE 282
K + + +DG ++IW++ +
Sbjct: 313 KNILASCGDDGFIKIWELQD 332
Score = 118 (46.6 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 41/175 (23%), Positives = 74/175 (42%)
Query: 198 QVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGE 257
+V NL+W P + +I+ +D T G++ G ++ L+ GH +
Sbjct: 26 KVWNLAWHPNGEILATCANDKYIQIWSKD--TNGKW--G--LVQSLE---GHEKTVRRVA 76
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGG 317
W P + + +S D S IW+ + K + + V + AWD G +A
Sbjct: 77 WSPCGR-FLAGASFDASTSIWEKS--KDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATC 133
Query: 318 IGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVW 372
D SI +W ++ + + GH DI + + + +L S S+D ++K W
Sbjct: 134 SRDKSIWIWQMEDD-NDFECLSINSGHGQDIKCVLWHPNEELLASSSYDDTIKFW 187
Score = 42 (19.8 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 34 TAATDNEKNNLPSISSSSKE 53
T T N+K NL I S KE
Sbjct: 2 TDTTKNDKYNLKLIDSMQKE 21
>ZFIN|ZDB-GENE-050809-116 [details] [associations]
symbol:dcaf11 "ddb1 and cul4 associated factor 11"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050809-116 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
CTD:80344 HOGENOM:HOG000241217 HOVERGEN:HBG055176 KO:K11801
OrthoDB:EOG44TP7K InterPro:IPR017399 PIRSF:PIRSF038135
GeneTree:ENSGT00700000104507 OMA:RMLHQRE EMBL:CR405710
EMBL:BC099999 IPI:IPI00491931 RefSeq:NP_001026845.1
UniGene:Dr.134153 STRING:Q499B0 Ensembl:ENSDART00000002992
GeneID:567578 KEGG:dre:567578 InParanoid:Q499B0 NextBio:20888741
Uniprot:Q499B0
Length = 541
Score = 134 (52.2 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 72/258 (27%), Positives = 110/258 (42%)
Query: 135 HQIPMSNEIVLKG--HTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLE 192
H +P N +V K K+ + D G+ LS D +R+YD SR + F L+
Sbjct: 163 HFLP--NHVVYKDTYQQKVFCGVYSDE-GNMFLSACQDQNIRLYD----TSRGR-FT-LK 213
Query: 193 PSEGHQVRNLSWSPTSDRFLCVTGSAQAKIYDR--DGLTLGEFVKGDMYIR---DLKNTK 247
+ + R++ WS +C T A+ +Y D + + V GD DL +
Sbjct: 214 KTV--KARDVGWSILD---VCFTPDARCVLYSSWSDYIHVCS-VDGDNETHTALDLNPDE 267
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
C + KE IL + DG L ++D + K+ +K A V A
Sbjct: 268 RRFCVFSLAA-STDGKE-ILGGANDGCLYVFDREQ---NKRTLKID-AHEDDVNAVAFA- 320
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDI--HVEKGHSDDITALKFSSDGRILLSRSF 365
D + + G D +VW+ + RP H+ GH D IT + D R L+S S
Sbjct: 321 DSSSQLLFSGSDDALCKVWDRRTLREDRPQPVGHLA-GHRDGITFIHSKGDARYLISNSK 379
Query: 366 DGSLKVWDLRKM--KEPL 381
D ++K+WD+RK KE L
Sbjct: 380 DQTIKLWDVRKFSPKEGL 397
Score = 59 (25.8 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 398 FSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFA 457
FSP+ F TG + G + YD +V ++ AC V +WHP N + +
Sbjct: 449 FSPE---FSTGQKFIYTGCSTGKIVIYDVLTGSVVCKLSNHDAC-VRDVSWHPYNNNMVS 504
Query: 458 TAGD 461
++ D
Sbjct: 505 SSWD 508
Score = 42 (19.8 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 5/14 (35%), Positives = 13/14 (92%)
Query: 360 LLSRSFDGSLKVWD 373
++S S+DG++++W+
Sbjct: 502 MVSSSWDGAIRLWE 515
>UNIPROTKB|G4MKJ2 [details] [associations]
symbol:MGG_04473 "WD repeat containing protein 5"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
GO:GO:0043581 KO:K14963 RefSeq:XP_003710987.1
EnsemblFungi:MGG_04473T0 GeneID:2677800 KEGG:mgr:MGG_04473
Uniprot:G4MKJ2
Length = 594
Score = 116 (45.9 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 306 AWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSF 365
A+ G +A G D ++ +W+++ G R HSD ++ + F DG +++S S
Sbjct: 313 AFSPKGNILASGSYDEAVFLWDVRAGRLMRS----LPAHSDPVSGIDFCRDGTLVVSCST 368
Query: 366 DGSLKVWDLRKMKEPLK--VFEDLPNNYAQTNVAFSPDEQLFL 406
DG +++WD + L+ V ED P A TNV FSP+ + L
Sbjct: 369 DGLIRIWDTAT-GQCLRTLVHEDNP---AVTNVCFSPNGRYIL 407
Score = 103 (41.3 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 37/137 (27%), Positives = 64/137 (46%)
Query: 248 GHICGLTCGEWHPKTKETILTS-SEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
GH + C + PK IL S S D ++ +WDV + + + P + P + C
Sbjct: 304 GHHNYVYCLAFSPKGN--ILASGSYDEAVFLWDVRAGRLMRSL--PAHSDPVS-GIDFCR 358
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFD 366
DG + DG I++W+ G R +H + + +T + FS +GR +L+ + D
Sbjct: 359 ---DGTLVVSCSTDGLIRIWDTATGQCLRTLVHED---NPAVTNVCFSPNGRYILAFNLD 412
Query: 367 GSLKVWDLRKMKEPLKV 383
+++WD + P KV
Sbjct: 413 SCIRLWDY--IAHPSKV 427
Score = 79 (32.9 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 22/94 (23%), Positives = 44/94 (46%)
Query: 134 RHQIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEP 193
R Q+ + L+GH++ ++ + + +G + S S D T R++D ++ ++
Sbjct: 165 RVQVRYKRRLELRGHSQPIAQVRISPNGRWIASASADGTARIWD-------AETGAHIDT 217
Query: 194 SEGHQ--VRNLSWSPTSDRFLCVTGSAQAKIYDR 225
GH V L+WSP S + +++DR
Sbjct: 218 LVGHMAGVSCLAWSPDSGTLATGSDDKAIRLWDR 251
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 143 (55.4 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 50/180 (27%), Positives = 88/180 (48%)
Query: 231 GEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVI 290
G V G + +R + +GH+ + W +K ++++S+DG L +WD + + K
Sbjct: 36 GVEVVGRIQMRTRRTLRGHLAKIYAMHWSTDSK-LLVSASQDGKLIVWDT--YTTNKVH- 91
Query: 291 KPKLARPGRVA-VTTCAWDCDGKCIA-GGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDI 348
A P R + V TCA+ G +A GG+ D ++NLK G+ H+ +
Sbjct: 92 ----AIPLRSSWVMTCAYAPSGNFVACGGL-DNMCSIYNLKTREGNVKVSRELSAHTGYL 146
Query: 349 TALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTG 408
+ +F D I+ S S D + +WD+ ++ VF L + ++A SPD +LF++G
Sbjct: 147 SCCRFLDDNSIVTS-SGDTTCALWDIETGQQKT-VF--LGHTGDCMSLAVSPDFKLFISG 202
Score = 122 (48.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 44/144 (30%), Positives = 68/144 (47%)
Query: 265 TILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQ 324
+I+TSS D + +WD+ E QK V L G + A D K G D + +
Sbjct: 156 SIVTSSGDTTCALWDI-ETGQQKTVF---LGHTGDCM--SLAVSPDFKLFISGACDATAK 209
Query: 325 VWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVF 384
+W+++ G R GH DI A+ F +G + + S D + +++DLR +E L V+
Sbjct: 210 LWDVREGT-CRQTF---SGHESDINAICFFPNGEAICTGSDDATCRLFDLRADQE-LIVY 264
Query: 385 EDLPNNYAQTNVAFSPDEQLFLTG 408
T+VAFS +L L G
Sbjct: 265 SHESIICGITSVAFSRSGRLLLAG 288
Score = 62 (26.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 36/155 (23%), Positives = 66/155 (42%)
Query: 136 QIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSE 195
+I M L+GH + A+ ++S S D + ++D N ++ + P
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWSTDSKLLVSASQDGKLIVWDTYTTN-KVHAI----PLR 96
Query: 196 GHQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYI-RDLKNTKGHICGLT 254
V +++P+ + C IY+ L E G++ + R+L G+ L+
Sbjct: 97 SSWVMTCAYAPSGNFVACGGLDNMCSIYN---LKTRE---GNVKVSRELSAHTGY---LS 147
Query: 255 CGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQV 289
C + +I+TSS D + +WD+ E QK V
Sbjct: 148 CCRF--LDDNSIVTSSGDTTCALWDI-ETGQQKTV 179
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 145 (56.1 bits), Expect = 9.4e-07, P = 9.4e-07
Identities = 49/217 (22%), Positives = 89/217 (41%)
Query: 226 DGLTLGEFVKGDMY-IRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFK 284
D L F++ + I+ + + GH+ +W P+ +LT ++ +W E
Sbjct: 189 DPQALAIFLRDEQARIKPIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGG 248
Query: 285 SQKQVIKPKLARPGRVAVTTCAWD-CDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKG 343
S +P + +V W + A D SI++W+++ G +
Sbjct: 249 SWNVDQRPFVGHTR--SVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATA 306
Query: 344 HSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKE--PLKVFEDLPNNYAQTNVAFSPD 401
H D+ + +S LLS DG+LKVWDLR+ K P+ F+ + T+V + P
Sbjct: 307 HDGDVNVISWSRREPFLLSGGDDGALKVWDLRQFKSGSPVATFKQ--HMAPVTSVEWHPQ 364
Query: 402 EQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGIS 438
+ + + + T L D E E + G++
Sbjct: 365 DSGVFAASGADNQITQWDLAVERDPESGETETDPGLA 401
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 112 (44.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 29/127 (22%), Positives = 64/127 (50%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+GH + C ++P++ + T S D + ++WD+ ++ ++V R + + +
Sbjct: 174 RGHTAEIVCLSFNPQST-LVATGSMDTTAKLWDI---QNGEEVYT---LRGHSAEIISLS 226
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFD 366
++ G I G D ++ VW+ G +++ GH +I++ F+ D ++L+ S D
Sbjct: 227 FNTSGDRIITGSFDHTVVVWDADTG----RKVNILIGHCAEISSASFNWDCSLILTGSMD 282
Query: 367 GSLKVWD 373
+ K+WD
Sbjct: 283 KTCKLWD 289
Score = 105 (42.0 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 36/144 (25%), Positives = 68/144 (47%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQV 325
ILT S D + ++WD K + + + +C +D GK IA DG+ ++
Sbjct: 276 ILTGSMDKTCKLWDATNGKC----VATLTGHDDEI-LDSC-FDYTGKLIATASADGTARI 329
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFE 385
++ +R I +GH +I+ + F+ G LL+ S D + ++WD + + L+V E
Sbjct: 330 FSA----ATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQT-GQCLQVLE 384
Query: 386 DLPNNYAQTNVAFSPDEQLFLTGT 409
+ + AF+ + +TG+
Sbjct: 385 GHTDEIF--SCAFNYKGNIVITGS 406
Score = 81 (33.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSW 204
L+GH+ + +L+ + SG R+++GS+D+TV ++D + R++ GH S
Sbjct: 215 LRGHSAEIISLSFNTSGDRIITGSFDHTVVVWD-------ADTGRKVNILIGHCAEISSA 267
Query: 205 SPTSDRFLCVTGSAQ--AKIYD 224
S D L +TGS K++D
Sbjct: 268 SFNWDCSLILTGSMDKTCKLWD 289
Score = 78 (32.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
VLK H ++ +A++ SGS ++GSYD T +++D S +L EGH+ V
Sbjct: 87 VLKAHILPLTNVALNKSGSCFITGSYDRTCKLWD-------TASGEELNTLEGHRNVVYA 139
Query: 202 LSWS-PTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHP 260
++++ P D+ TGS +D+ L G Y +GH + C ++P
Sbjct: 140 IAFNNPYGDKI--ATGS-----FDKT-CKLWSVETGKCY----HTFRGHTAEIVCLSFNP 187
Query: 261 KT 262
++
Sbjct: 188 QS 189
>UNIPROTKB|E1BFB3 [details] [associations]
symbol:STRN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070016 "armadillo repeat domain binding" evidence=IEA]
[GO:0051721 "protein phosphatase 2A binding" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0030331
"estrogen receptor binding" evidence=IEA] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IEA] [GO:0005923 "tight junction"
evidence=IEA] [GO:0000159 "protein phosphatase type 2A complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0008285 GO:GO:0000159 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005923
InterPro:IPR013258 Pfam:PF08232 GeneTree:ENSGT00520000055597
CTD:6801 OMA:FNMETRQ EMBL:DAAA02030559 EMBL:DAAA02030560
IPI:IPI00698186 RefSeq:NP_001193033.1 UniGene:Bt.42222
ProteinModelPortal:E1BFB3 Ensembl:ENSBTAT00000024742 GeneID:537010
KEGG:bta:537010 NextBio:20877050 Uniprot:E1BFB3
Length = 780
Score = 148 (57.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 45/153 (29%), Positives = 76/153 (49%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEF----KSQKQVIKPKLA-RPGRVA 301
+ H G+ +HP T+ ++T+SED +L++W++ + KS ++P R +
Sbjct: 460 RSHFDGIRALAFHP-TEPVLITASEDHTLKMWNLQKTAPAKKSTSLDVEPIYTFRAHKGP 518
Query: 302 VTTCAWDCDGK-CIAGGIGDGSIQVWN-----LKPGWGSRPDIHVEK--GHSDDITALKF 353
V G+ C +GG DG IQ WN + P P + GH+D + L +
Sbjct: 519 VLCVVMSSSGEQCYSGG-ADGLIQSWNTTNPNIDPYDSYDPSVLRGPLLGHTDAVWGLAY 577
Query: 354 SSDGRILLSRSFDGSLKVWDLRKMKEPLKVFED 386
S+ + LLS S DG+L++W+ ++ L VF D
Sbjct: 578 SAAHQRLLSCSADGTLRLWNTTEVAPALSVFND 610
>UNIPROTKB|B4GT01 [details] [associations]
symbol:GL26386 "Ribosome biogenesis protein WDR12 homolog"
species:7234 "Drosophila persimilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH479189 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002021667.1
ProteinModelPortal:B4GT01 EnsemblMetazoa:FBtr0192001 GeneID:6596580
KEGG:dpe:Dper_GL26386 FlyBase:FBgn0163968 Uniprot:B4GT01
Length = 419
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 58/249 (23%), Positives = 113/249 (45%)
Query: 143 IVLKGHT---KIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ- 198
+ + GHT K V +++D R +S S D T ++ + N + + +GH+
Sbjct: 138 LTIPGHTAPIKAVDWISLDDDTGRFVSSSQDQTAMLWQW---NVGANTVECVSVCKGHER 194
Query: 199 -VRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMY---IRDLKNT-KGHICGL 253
V ++S SP RF + K++ + GE M +R K T +GH +
Sbjct: 195 GVDSVSVSPDGQRFATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPKITLQGHRESI 254
Query: 254 TCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKC 313
+ +W + T+LT S D +L++WD++ + IK +++ ++ ++
Sbjct: 255 SAVQWMDAS--TLLTGSWDHTLKVWDLS-----LEGIKAEIST--NKSIFDASYSKLNHL 305
Query: 314 IAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL-LSRSFDGSLKVW 372
I D ++++++ + GS + GH+ + + +S+ L +S S+D K+W
Sbjct: 306 ILTASADKNLRLYDSRTNQGSVVR-NTYLGHNAWVQTVMWSTTEEFLFVSGSYDNQNKLW 364
Query: 373 DLRKMKEPL 381
D R K PL
Sbjct: 365 DCRSPKAPL 373
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 68/287 (23%), Positives = 124/287 (43%)
Query: 134 RHQIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEP 193
R P + +L H VSA V SG +L+G YD T+ ++ +G + + + P
Sbjct: 92 RFPAPEPQDCLL--HDDWVSA--VKASGKWILTGCYDNTLNIWTNKGKH--ILTI----P 141
Query: 194 SEGHQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGL 253
++ + W D TG + D+ + L ++ G + + KGH G+
Sbjct: 142 GHTAPIKAVDWISLDDD----TGRFVSSSQDQTAM-LWQWNVGANTVECVSVCKGHERGV 196
Query: 254 TCGEWHPKTKETILTSSEDGSLRIW-----DVNEFKSQKQ----VIKPKLARPG-RVAVT 303
P + T S D L++W D E S++ V PK+ G R +++
Sbjct: 197 DSVSVSPDGQR-FATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPKITLQGHRESIS 255
Query: 304 TCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR 363
W D + G D +++VW+L G + +I K D +S ++L+
Sbjct: 256 AVQW-MDASTLLTGSWDHTLKVWDLSLE-GIKAEISTNKSIFD----ASYSKLNHLILTA 309
Query: 364 SFDGSLKVWDLRKMKEPLKVFEDLPNN-YAQTNVAFSPDEQLFLTGT 409
S D +L+++D R + + L +N + QT + + +E LF++G+
Sbjct: 310 SADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGS 356
>UNIPROTKB|Q29KQ0 [details] [associations]
symbol:GA19813 "Ribosome biogenesis protein WDR12 homolog"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH379061 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 HSSP:P61964 KO:K14863
OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001356065.1
ProteinModelPortal:Q29KQ0 GeneID:4816649 KEGG:dpo:Dpse_GA19813
FlyBase:FBgn0079809 InParanoid:Q29KQ0 Uniprot:Q29KQ0
Length = 419
Score = 144 (55.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 58/249 (23%), Positives = 113/249 (45%)
Query: 143 IVLKGHT---KIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ- 198
+ + GHT K V +++D R +S S D T ++ + N + + +GH+
Sbjct: 138 LTIPGHTAPIKAVDWISLDDDTGRFVSSSQDQTAMLWQW---NVGANTVECVSVCKGHER 194
Query: 199 -VRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMY---IRDLKNT-KGHICGL 253
V ++S SP RF + K++ + GE M +R K T +GH +
Sbjct: 195 GVDSVSVSPDGQRFATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPKITLQGHRESI 254
Query: 254 TCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKC 313
+ +W + T+LT S D +L++WD++ + IK +++ ++ ++
Sbjct: 255 SAVQWMDAS--TLLTGSWDHTLKVWDLS-----LEGIKAEIST--NKSIFDASYSKLNHL 305
Query: 314 IAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL-LSRSFDGSLKVW 372
I D ++++++ + GS + GH+ + + +S+ L +S S+D K+W
Sbjct: 306 ILTASADKNLRLYDSRTNQGSVVR-NTYLGHNAWVQTVMWSTTEEFLFVSGSYDNQNKLW 364
Query: 373 DLRKMKEPL 381
D R K PL
Sbjct: 365 DCRSPKAPL 373
Score = 126 (49.4 bits), Expect = 0.00010, P = 0.00010
Identities = 68/287 (23%), Positives = 124/287 (43%)
Query: 134 RHQIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEP 193
R P + +L H VSA V SG +L+G YD T+ ++ +G + + + P
Sbjct: 92 RFPAPEPQDCLL--HDDWVSA--VKASGKWILTGCYDNTLNIWTNKGKH--ILTI----P 141
Query: 194 SEGHQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGL 253
++ + W D TG + D+ + L ++ G + + KGH G+
Sbjct: 142 GHTAPIKAVDWISLDDD----TGRFVSSSQDQTAM-LWQWNVGANTVECVSVCKGHERGV 196
Query: 254 TCGEWHPKTKETILTSSEDGSLRIW-----DVNEFKSQKQ----VIKPKLARPG-RVAVT 303
P + T S D L++W D E S++ V PK+ G R +++
Sbjct: 197 DSVSVSPDGQR-FATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPKITLQGHRESIS 255
Query: 304 TCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR 363
W D + G D +++VW+L G + +I K D +S ++L+
Sbjct: 256 AVQW-MDASTLLTGSWDHTLKVWDLSLE-GIKAEISTNKSIFD----ASYSKLNHLILTA 309
Query: 364 SFDGSLKVWDLRKMKEPLKVFEDLPNN-YAQTNVAFSPDEQLFLTGT 409
S D +L+++D R + + L +N + QT + + +E LF++G+
Sbjct: 310 SADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGS 356
>MGI|MGI:1932404 [details] [associations]
symbol:Phip "pleckstrin homology domain interacting protein"
species:10090 "Mus musculus" [GO:0001932 "regulation of protein
phosphorylation" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006606
"protein import into nucleus" evidence=IMP] [GO:0007010
"cytoskeleton organization" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=IGI;IMP] [GO:0008286
"insulin receptor signaling pathway" evidence=IDA] [GO:0010800
"positive regulation of peptidyl-threonine phosphorylation"
evidence=IDA] [GO:0022604 "regulation of cell morphogenesis"
evidence=ISO] [GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IDA] [GO:0040008 "regulation of growth"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IDA] [GO:0043568 "positive regulation of
insulin-like growth factor receptor signaling pathway"
evidence=IDA] [GO:0045840 "positive regulation of mitosis"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 MGI:MGI:1932404 GO:GO:0005634 GO:GO:0008286
GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0045944
GO:GO:0010800 GO:GO:0006606 GO:GO:0040008 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0045840 GO:GO:0033138 GO:GO:0043568
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 HOGENOM:HOG000095265 HSSP:P16649
HOVERGEN:HBG108248 OrthoDB:EOG41ZF90 EMBL:AJ303103 EMBL:AB049460
EMBL:BC049950 EMBL:AK162189 EMBL:AF310251 IPI:IPI00311490
UniGene:Mm.221688 ProteinModelPortal:Q8VDD9 SMR:Q8VDD9
IntAct:Q8VDD9 STRING:Q8VDD9 PhosphoSite:Q8VDD9 PaxDb:Q8VDD9
PRIDE:Q8VDD9 UCSC:uc009qvv.1 InParanoid:Q8VDD9 CleanEx:MM_PHIP
Genevestigator:Q8VDD9 Uniprot:Q8VDD9
Length = 1821
Score = 134 (52.2 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 44/160 (27%), Positives = 69/160 (43%)
Query: 262 TKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPG------------RVAVTTCAWDC 309
T ++ S DG+ RIW + K ++ RP ++ VT AWD
Sbjct: 376 TSNRFVSGSRDGTARIWQFKR-REWKSILLDMATRPAGQNLQGIEDKITKMKVTMVAWDR 434
Query: 310 DGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALK-FSSDGRILLSRSFDGS 368
+ + + +++VWN G IHV GH D++ L+ D R+L S DG+
Sbjct: 435 HDNTVITAVNNMTLKVWNSYTG----QLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDGN 490
Query: 369 LKVWDLR---KMKEPLKVFEDLPNNYAQTNVAFSPDEQLF 405
+ VWDL K++ + E + A + SPD Q F
Sbjct: 491 VIVWDLARGVKVRSYFNMIEGQGHG-AVFDCKCSPDGQHF 529
Score = 70 (29.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNL 202
L+GH +S +AV++ + + +GS D +R++ L++ L +GH + +L
Sbjct: 221 LRGHAAEISDMAVNYENTMIAAGSCDKMIRVWC-------LRTCAPLAVLQGHSASITSL 273
Query: 203 SWSPT---SDRFLCVTGS 217
+SP S R+L TG+
Sbjct: 274 QFSPLCSGSKRYLSSTGA 291
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 122 (48.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 272 DGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPG 331
D ++R+W + S + L R V + ++ +GK +A D +++W+L G
Sbjct: 1 DKTVRLWSAQQGNSVR------LFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASG 54
Query: 332 WGSRPDIHVE-KGHSDDITALKFSSDGRILLSRSFDGSLKVWDLR 375
+ E +GH+D IT+L FS D ++ S S D S++VWD+R
Sbjct: 55 -----TLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIR 94
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/183 (27%), Positives = 88/183 (48%)
Query: 228 LTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQK 287
L G V G + +R + +GH+ + W +K ++++S+DG L +WD + + K
Sbjct: 33 LVSGLEVVGRVQMRTRRTLRGHLAKIYAMHWATDSK-LLVSASQDGKLIVWDT--YTTNK 89
Query: 288 QVIKPKLARPGRVA-VTTCAWDCDGKCIA-GGIGDGSIQVWNLKPGWGSRPDIHVEKGHS 345
A P R + V TCA+ G +A GG+ D ++NLK G+ H+
Sbjct: 90 VH-----AIPLRSSWVMTCAYAPSGNFVACGGL-DNMCSIYNLKSREGNVKVSRELSAHT 143
Query: 346 DDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLF 405
++ +F D I+ S S D + +WD+ ++ VF + ++A SPD +LF
Sbjct: 144 GYLSCCRFLDDNNIVTS-SGDTTCALWDIETGQQKT-VFVGHTGDCM--SLAVSPDYKLF 199
Query: 406 LTG 408
++G
Sbjct: 200 ISG 202
Score = 118 (46.6 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 43/143 (30%), Positives = 65/143 (45%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQV 325
I+TSS D + +WD+ E QK V +AV+ D K G D S ++
Sbjct: 157 IVTSSGDTTCALWDI-ETGQQKTVFVGHTGDCMSLAVSP-----DYKLFISGACDASAKL 210
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFE 385
W+++ G R GH DI A+ F +G + + S D S +++DLR +E L +
Sbjct: 211 WDVREGT-CRQTF---TGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQE-LTAYS 265
Query: 386 DLPNNYAQTNVAFSPDEQLFLTG 408
T+VAFS +L G
Sbjct: 266 QESIICGITSVAFSLSGRLLFAG 288
Score = 40 (19.1 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 152 VSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGH 197
V A SG+ V G D +Y+ + ++ R+L G+
Sbjct: 100 VMTCAYAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGY 145
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 135 (52.6 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA 306
+GH + C H +++ S D +LR+WD+ + ++ G +A C
Sbjct: 1072 QGHTSTVRCMHLHGSK---VVSGSRDATLRVWDIEQGSCLHVLV-------GHLAAVRCV 1121
Query: 307 WDCDGKCIAGGIGDGSIQVWNLKPGWGSRPD-IHVEKGHSDDITALKFSSDGRILLSRSF 365
DGK I G D +++W+ P R + +H +GH++ + +L+F DG ++S S
Sbjct: 1122 -QYDGKLIVSGAYDYMVKIWH--P---ERQECLHTLQGHTNRVYSLQF--DGLHVVSGSL 1173
Query: 366 DGSLKVWDL 374
D S++VWD+
Sbjct: 1174 DTSIRVWDV 1182
Score = 70 (29.7 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 26/91 (28%), Positives = 42/91 (46%)
Query: 138 PMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGH 197
P+ VLKGH V + SG+R++SGS D T++++ +N + L GH
Sbjct: 983 PVRKPKVLKGHDDHVIT-CLQFSGNRIVSGSDDNTLKVWS--AVNGKC-----LRTLVGH 1034
Query: 198 QVRNLSWSPTSDRFLCVTGSAQA--KIYDRD 226
WS + ++GS K++D D
Sbjct: 1035 T--GGVWSSQMSGNIIISGSTDRTLKVWDMD 1063
Score = 40 (19.1 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 10/49 (20%), Positives = 24/49 (48%)
Query: 26 RSDPLTTTTAATDNEKNNLPSISSSSKEWL----GTLRNPKSSDAAPIG 70
R P ++ + T + +++SS+ W+ T R ++S+ + +G
Sbjct: 3 RGCPAASSESVTSAGERTQSAVTSSTSTWVKSQASTSRKTEASEESGLG 51
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 131 (51.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 41/145 (28%), Positives = 74/145 (51%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQV 325
+ T S G + I+ V K + L G+ + + A+ DGK +A G DG I +
Sbjct: 121 LATGSHVGKVNIFGVETGKKEYS-----LDTRGKF-ILSIAYSPDGKYLASGAIDGIINI 174
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFE 385
+++ G +H +GH+ I +L FS D ++L++ S DG +K+++++ L
Sbjct: 175 FDIATG----KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHAS--LAATL 228
Query: 386 DLPNNYAQTNVAFSPDEQLFLTGTS 410
++ NVAFSPD+ F++ +S
Sbjct: 229 SGHGSWV-LNVAFSPDDTHFVSSSS 252
Score = 51 (23.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 159 HSGSR-VLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNLSWSPTSDRFLCVT 215
+ GS V+SGS D V+++ + LQS EGHQ V ++ SP+ + +
Sbjct: 29 NDGSELVISGSLDDLVKVWKWSDERLELQS-----TLEGHQLGVVSVDVSPSGNIMASSS 83
Query: 216 GSAQAKIYD 224
A +++D
Sbjct: 84 LDAHIRLWD 92
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 141 (54.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 36/122 (29%), Positives = 62/122 (50%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGG 317
WHPK + T ED ++RIW E SQ+ V K L+ + AW G+ +A
Sbjct: 22 WHPKGN-VLATCGEDKTIRIWA--EDASQRWVAKTVLSDGHSRTIRDVAWSPCGQYLASA 78
Query: 318 IGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKM 377
D ++ +W+ K G + +E GH +++ ++ +S G +L + S D S+ VW++ +
Sbjct: 79 SFDATVAIWDKKSG-EFECNATLE-GHENEVKSVSWSKSGSLLATCSRDKSVWVWEVAQE 136
Query: 378 KE 379
E
Sbjct: 137 DE 138
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 49/242 (20%), Positives = 107/242 (44%)
Query: 174 RMYDFQGMNSRLQSFRQLEPSEGHQVRNLSWSPTSDRFLCVT-GSAQAKIYDRDGLTLGE 232
R Y ++ + +F+ + +G + + +WS ++ + + G KI+D + G
Sbjct: 38 RQYILDVLDRDIGAFKTFDTRDG--LYDCTWSEENECHVASSSGDGSIKIWDTQAPSGG- 94
Query: 233 FVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKP 292
R +K+ + H + +W+ TK+T +T S D S++IW+ +S K
Sbjct: 95 --------RPIKSFEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIWNPRMDRSLKTF--- 143
Query: 293 KLARPGRVAVTTCAWDC-DGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITAL 351
R R + + W + A GD ++++W+ + +R ++ K H +I
Sbjct: 144 ---REHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRD---NR-SLNTIKAHDHEILTC 196
Query: 352 KFSS-DGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTS 410
++ + + +++ S D ++++WD+R P + + YA + SP + L S
Sbjct: 197 DWNKYNDKEVVTGSVDKTIRIWDIRYPDRPTTILRG--HTYAVRRIKCSPHSESMLASCS 254
Query: 411 VE 412
+
Sbjct: 255 YD 256
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 39/144 (27%), Positives = 71/144 (49%)
Query: 241 RDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV 300
R LK + H + W P+ + S D +L+IWD + +S IK A +
Sbjct: 138 RSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDNRSLN-TIK---AHDHEI 193
Query: 301 AVTTCAWDC--DGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGR 358
TC W+ D + + G + D +I++W+++ + RP + +GH+ + +K S
Sbjct: 194 L--TCDWNKYNDKEVVTGSV-DKTIRIWDIR--YPDRPTT-ILRGHTYAVRRIKCSPHSE 247
Query: 359 ILL-SRSFDGSLKVWDLRKMKEPL 381
+L S S+D S+ VWD + ++P+
Sbjct: 248 SMLASCSYDMSVIVWDRAREQDPI 271
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 145 (56.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 48/166 (28%), Positives = 85/166 (51%)
Query: 244 KNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVT 303
++ +GH +TC ++ PK ++ + + S+D + +W+ FK Q++ K + G AV
Sbjct: 41 RSFRGHEDIITCADFDPKMRQ-VASCSKDSIVYVWN---FKPQQRPFK-FVGHKG--AVY 93
Query: 304 TCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR 363
+ DG+ IA D I++W + + K H I ++ FS+DG LLS
Sbjct: 94 CVKYSPDGETIASCGQDRQIRLWQNTV----QSKCSIIKAHCGAIRSMSFSADGGYLLSS 149
Query: 364 SFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
S D +LK+W L+ K+ + F N+ ++ V SPD +L +G+
Sbjct: 150 SDDKTLKLWRLQD-KKFMCSFAG-HKNWVRSGV-ISPDMRLVASGS 192
>UNIPROTKB|A8XEN7 [details] [associations]
symbol:wdr-23 "DDB1- and CUL4-associated factor 11 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0008340 "determination
of adult lifespan" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008340 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR017399
PIRSF:PIRSF038135 EMBL:HE601540 ProteinModelPortal:A8XEN7
STRING:A8XEN7 EnsemblMetazoa:CBG11954 WormBase:CBG11954
Uniprot:A8XEN7
Length = 554
Score = 134 (52.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 251 CGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCD 310
C + C + +++ + +SE S+ ++DV + + + ++ A V + C D
Sbjct: 248 CAVFCVRFSDDSEQIVCGTSEY-SIHVFDVEQRRRIRTIVN---AHEDDVN-SVCFADYG 302
Query: 311 GKCIAGGIGDGSIQVWNLKPGW--GSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGS 368
I DG ++VW+ K W G + V GH D +T + D R LLS S D +
Sbjct: 303 SNLIYSAGDDGLVKVWD-KRAWSDGDVIPVGVFAGHRDGVTYVDSRQDERYLLSNSKDQT 361
Query: 369 LKVWDLRK 376
+KVWDLRK
Sbjct: 362 IKVWDLRK 369
Score = 56 (24.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 443 VVQCAWHPKLNQIFATAGD 461
V +C WHP+ N+I +T+ D
Sbjct: 466 VRECDWHPQENEIVSTSWD 484
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 148 (57.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 52/205 (25%), Positives = 99/205 (48%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH G+ + ++ + + G++++WD+ E K + + R ++V +
Sbjct: 57 GHSSGIDSVTFDA-SEVLVAAGAASGTIKLWDLEEAKIVRTLTGH---RSNCISVDFHPF 112
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDG 367
G+ A G D ++++W+++ + IH KGH+ + L+F+ DGR ++S D
Sbjct: 113 ---GEFFASGSLDTNLKIWDIR----KKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDN 165
Query: 368 SLKVWDLRKMKEPLKVFEDLPNNYAQT-NVAFSPDEQLFLTGTSVERESTTGGLLCFYDR 426
+KVWDL K + + ++ Q ++ F P E L TG S +R + F+D
Sbjct: 166 IVKVWDLTAGK----LLTEFKSHEGQIQSLDFHPHEFLLATG-SADRT------VKFWDL 214
Query: 427 EKLELVSRVGISPACSVVQC-AWHP 450
E EL+ G P + V+C +++P
Sbjct: 215 ETFELIGSGG--PETAGVRCLSFNP 237
Score = 46 (21.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 148 HTKIVSALAVDHSGSRVL-SGSYDYTVRMYDFQGMNSRLQSF 188
H+ V+ L + SRVL +G D+ V ++ N+ L +
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLY 56
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 144 (55.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 50/171 (29%), Positives = 83/171 (48%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
L+ +GH+ L +HP K + T+S D + R+WD+N + +++ +R +V
Sbjct: 332 LQTFEGHLDRLARVAFHPSGKY-LGTTSYDKTWRLWDINT--GAELLLQEGHSR----SV 384
Query: 303 TTCAWDCDGKCIAGGIG-DGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
A+ DG +A G D +VW+L+ G I V +GH + ++ FS +G L
Sbjct: 385 YGIAFQQDG-ALAASCGLDSLARVWDLRTG----RSILVFQGHIKPVFSVNFSPNGYHLA 439
Query: 362 SRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVE 412
S D ++WDLR M++ L + N +Q V + P E FL S +
Sbjct: 440 SGGEDNQCRIWDLR-MRKSLYIIPAHANLVSQ--VKYEPQEGYFLATASYD 487
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 142 (55.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 37/159 (23%), Positives = 72/159 (45%)
Query: 258 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTT-CAWDCDGKCIAG 316
W+P+ + +L+ S+D S+ +WD++ + G ++ AW G
Sbjct: 182 WNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIHDTFFG 241
Query: 317 GIGDGS-IQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SFDGSLKVWDL 374
+GD + +W+ + G ++P IHV + H+ ++ L F+ L++ S D ++ +WD+
Sbjct: 242 SVGDDKKLMIWDTRTG--TKP-IHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDM 298
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
R + L + Q V FSP + L +R
Sbjct: 299 RNLGNRLHSLISHTDEVFQ--VQFSPHNETVLASCGSDR 335
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 45/155 (29%), Positives = 81/155 (52%)
Query: 274 SLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWG 333
S +I+DV ++ + + + G + + + + DGK +A G D I+VW++
Sbjct: 291 SAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVCFSPDGKYLATGAEDKQIRVWDI----A 346
Query: 334 SRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLR--KMKEPLKVFEDLPNNY 391
+R H+ GH DI +L F+ +GR + S S D ++++WD+ K+ L + ED
Sbjct: 347 TRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSI-ED----- 400
Query: 392 AQTNVAFSPDEQLFLTGTSVER-----ESTTGGLL 421
T VA SPD L++ S+++ ++TTG L+
Sbjct: 401 GVTTVAMSPDG-LYVAAGSLDKTVRVWDTTTGYLV 434
Score = 130 (50.8 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 33/109 (30%), Positives = 58/109 (53%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQV 325
I + S D ++R+WD+ E K ++ G VTT A DG +A G D +++V
Sbjct: 373 IASGSGDKTVRLWDIAEGK----LVYTLSIEDG---VTTVAMSPDGLYVAAGSLDKTVRV 425
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
W+ G+ + GH D + ++ F+ +G+ L+S S D ++K+W+L
Sbjct: 426 WDTTTGYLVER-LENPDGHKDSVYSVAFAPNGKELVSGSLDKTIKLWEL 473
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 141 (54.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 35/128 (27%), Positives = 67/128 (52%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH +TC P K I TSS DG+++IW F+ ++ L R ++ W
Sbjct: 52 GHEKSVTCVSVSPN-KRWIATSSSDGTIKIWSALTFR-----LECTLFGHYR-GISQVKW 104
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDG 367
K +A D +I++W+ + R + KGH++ ++++ F+ G +L+S S+D
Sbjct: 105 ATGSKYLASASDDKTIRIWDFE----KRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDE 160
Query: 368 SLKVWDLR 375
++++W+L+
Sbjct: 161 TVRIWNLQ 168
Score = 141 (54.7 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 40/159 (25%), Positives = 82/159 (51%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH G++ +W +K + ++S+D ++RIWD F+ + V + + V++ +
Sbjct: 94 GHYRGISQVKWATGSKY-LASASDDKTIRIWD---FEKRCSV---RCLKGHTNYVSSIDF 146
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDG 367
+ G + G D ++++WNL+ G R + HS+ I ++ S+DG + + S+DG
Sbjct: 147 NPLGTLLVSGSWDETVRIWNLQDGTCLR----MLPAHSEPIISVSISADGTLCATASYDG 202
Query: 368 SLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFL 406
++WD+ + LK + P N +N+ F+ + + L
Sbjct: 203 MARIWDVLS-GQCLKTLVE-PINVPLSNLQFTENRKYLL 239
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 140 (54.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 50/183 (27%), Positives = 87/183 (47%)
Query: 228 LTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQK 287
L G V G + +R + +GH+ + W +K ++++S+DG L +WD + + K
Sbjct: 33 LVSGLEVVGRVQMRTRRTLRGHLAKIYAMHWATDSK-LLVSASQDGKLIVWD--SYTTNK 89
Query: 288 QVIKPKLARPGRVA-VTTCAWDCDGKCIA-GGIGDGSIQVWNLKPGWGSRPDIHVEKGHS 345
A P R + V TCA+ G +A GG+ D ++NLK G+ H+
Sbjct: 90 VH-----AIPLRSSWVMTCAYAPSGNFVACGGL-DNMCSIYNLKSREGNVKVSRELSAHT 143
Query: 346 DDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLF 405
++ +F D I+ S S D + +WD+ ++ VF + ++A SPD LF
Sbjct: 144 GYLSCCRFLDDNNIVTS-SGDTTCALWDIETGQQKT-VFVGHTGDCM--SLAVSPDFNLF 199
Query: 406 LTG 408
++G
Sbjct: 200 ISG 202
>UNIPROTKB|G4N754 [details] [associations]
symbol:MGG_03611 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CM001234 RefSeq:XP_003716286.1
ProteinModelPortal:G4N754 EnsemblFungi:MGG_03611T0 GeneID:2676653
KEGG:mgr:MGG_03611 Uniprot:G4N754
Length = 340
Score = 140 (54.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 48/172 (27%), Positives = 76/172 (44%)
Query: 240 IRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGR 299
IR L+ +I T + + T+ T+ DG++ IWD+ QV + P
Sbjct: 56 IRTLRTPHANI---TVAAPFDQAQSTVCTAGSDGTVAIWDLRV--GAGQVTRQIGTAPTS 110
Query: 300 VAVTTCAWDCDG-KCIAGGI----GDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFS 354
+ C C G +A G SI +W+++ S P + + HSDDIT L F
Sbjct: 111 IGSLAC---CPGANMVAVGTEYENNQASIVIWDIRTQ--SAPVVQYNEVHSDDITELNFH 165
Query: 355 -SDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLF 405
+D LLS S DG + V+DLR E + + L + + + F ++F
Sbjct: 166 PADNHTLLSGSTDGLVNVYDLRVTDEDEVIIQTLNHGASVHHAGFLNRTEVF 217
>TAIR|locus:2029815 [details] [associations]
symbol:ATCSA-1 "AT1G27840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IMP] [GO:0010224
"response to UV-B" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010224 KO:K10570 GO:GO:0080008 OMA:TMLRGHY UniGene:At.51683
IPI:IPI00657564 RefSeq:NP_001031099.1 UniGene:At.17206
ProteinModelPortal:F4HUT3 SMR:F4HUT3 EnsemblPlants:AT1G27840.3
GeneID:839677 KEGG:ath:AT1G27840 PhylomeDB:F4HUT3 Uniprot:F4HUT3
Length = 451
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 61/253 (24%), Positives = 111/253 (43%)
Query: 158 DHSGSRVLSGSYDYTVRMYDFQGMN-SRLQSFRQLEPSEGHQVRNLSWSPTSDRFLCVTG 216
D R+ S S+ + + S + F + P G V +L T R+L ++G
Sbjct: 7 DRETGRIRSNSFANRFKSRRILSLQLSNRKDF--VSPHRG-SVNSLQVDLTEGRYL-LSG 62
Query: 217 SAQ--AKIYDRDGLT----LGEFVKGD-MYIRDLKNTKGHICGLTCGEWHPKTKETILTS 269
+A A ++D T G K ++ D ++ GH ++ W+P +T
Sbjct: 63 AADGSAAVFDVQRATDYEASGLIAKHKCIFTVDKQHENGHKYAISSAIWYPIDTGLFITG 122
Query: 270 SEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA-WDCDGKCIAGGIGDGSIQVWNL 328
S D L++WD N + + V+ K+ PG+V T + IA G D +++ ++
Sbjct: 123 SFDHYLKVWDTN---TAQAVVDFKM--PGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDI 177
Query: 329 KPGWGSRPDIHVEKGHSDDITALKFSSDGR-ILLSRSFDGSLKVWDLRKMKEPLKVFEDL 387
G S H GH D + ++++S+ +L + DG+++ WD+R+ F L
Sbjct: 178 ASGAFS----HTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAG----CFRVL 229
Query: 388 PNNYAQTNVAFSP 400
+ +QT + F P
Sbjct: 230 --DQSQTQLGFRP 240
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 139 (54.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 36/128 (28%), Positives = 68/128 (53%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA-VTTC 305
KGH +T PK + IL++S D S+ +W + ++ + P+ + G V+
Sbjct: 12 KGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGI--PQRSLKGHSHFVSDV 69
Query: 306 AWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSF 365
DG+ G DG++++W+L G +R + GH+ D+ ++ FS+D R ++S S
Sbjct: 70 VISSDGQFALSGAWDGTLRLWDLTTGLTTRRFV----GHTKDVLSVAFSADNRQIVSGSR 125
Query: 366 DGSLKVWD 373
D ++K+W+
Sbjct: 126 DKTIKLWN 133
Score = 128 (50.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 55/182 (30%), Positives = 89/182 (48%)
Query: 320 DGSIQVWNL---KPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRK 376
D SI +W L + +G P + KGHS ++ + SSDG+ LS ++DG+L++WDL
Sbjct: 37 DKSIIMWKLTRDETNYGI-PQRSL-KGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTT 94
Query: 377 MKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT---SVERESTTGGLLCFY---DREKLE 430
L + + +VAFS D + ++G+ +++ +T G +C Y D E
Sbjct: 95 ---GLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLG--VCKYTIQDEGHTE 149
Query: 431 LVSRVGISPACS---VVQCAWHPKLNQIFATAGDKSQ----GGTHILYDPRLSERGALVC 483
VS V SP S +V C W K+ +++ A K + G T L +S G+L C
Sbjct: 150 WVSCVRFSPNSSNPIIVSCGWD-KMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL-C 207
Query: 484 VA 485
+
Sbjct: 208 AS 209
Score = 96 (38.9 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 38/142 (26%), Positives = 68/142 (47%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQ-GMNSRLQSFRQLEPSEGHQVRNLS 203
LKGH+ VS + + G LSG++D T+R++D G+ +R F GH LS
Sbjct: 59 LKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTR--RF------VGHTKDVLS 110
Query: 204 WSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
+ ++D V+GS I + L + ++ I+D +GH ++C + P +
Sbjct: 111 VAFSADNRQIVSGSRDKTIKLWNTLGVCKYT-----IQD----EGHTEWVSCVRFSPNSS 161
Query: 264 ETILTSSE-DGSLRIWDVNEFK 284
I+ S D +++W++ K
Sbjct: 162 NPIIVSCGWDKMVKVWNLANCK 183
Score = 67 (28.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 31/118 (26%), Positives = 49/118 (41%)
Query: 268 TSSEDGSLRIWDVNEFK-----SQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGS 322
+ +DG +WD+NE K VI P R W C A G S
Sbjct: 209 SGGKDGQAMLWDLNEGKHLYTLDSGDVINALCFSPNRY------W----LCAATG---PS 255
Query: 323 IQVWNLKPGWGSRPDIHVE------KGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
I++W+L+ G ++ E K T+L +S+DG+ L + D ++VW +
Sbjct: 256 IKIWDLE-GKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQV 312
>RGD|1359599 [details] [associations]
symbol:Wsb2 "WD repeat and SOCS box-containing 2" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001496
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF07525
PROSITE:PS50082 PROSITE:PS50225 PROSITE:PS50294 SMART:SM00253
SMART:SM00320 SMART:SM00969 UniPathway:UPA00143 RGD:1359599
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
GeneTree:ENSGT00700000104017 HOGENOM:HOG000063727
HOVERGEN:HBG034543 CTD:55884 KO:K10342 OrthoDB:EOG45DWPC
EMBL:BC081901 IPI:IPI00371120 RefSeq:NP_001007617.1 UniGene:Rn.4063
Ensembl:ENSRNOT00000001499 GeneID:288692 KEGG:rno:288692
UCSC:RGD:1359599 InParanoid:Q66HE3 NextBio:628569
Genevestigator:Q66HE3 Uniprot:Q66HE3
Length = 404
Score = 141 (54.7 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 59/217 (27%), Positives = 101/217 (46%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAV 302
L N GH + + P ++++S D +LRIWD+N+ Q QV+ L V
Sbjct: 146 LLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQW---VYC 202
Query: 303 TTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLS 362
+ + DC C A G + S+ +W+++ S I +GH + + FS D +L++
Sbjct: 203 CSISPDCSMLCSAAG--EKSVFLWSMR----SYTLIRKLEGHQSSVVSCDFSPDSALLVT 256
Query: 363 RSFDGSLKVWD------LRKMKEP-LKVFEDLPNNYAQT--NVAFSPDEQLFLTGTSVER 413
S+D S+ +WD LR + L+ D + + + +V FSP E L+L + +R
Sbjct: 257 ASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSDVHMSSLRSVCFSP-EGLYLATVADDR 315
Query: 414 ESTTGGLLCFYDREKLELVSRVGISPACSVVQCAWHP 450
LL + LEL + V +P + + C + P
Sbjct: 316 ------LLRIW---ALELKAPVAFAPMTNGLCCTFFP 343
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 43/143 (30%), Positives = 71/143 (49%)
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV-AVTTCAWDCDGKCIAGGI 318
PK K TI+++S D L +W++N ++ K + G A+ + DG G
Sbjct: 33 PKLK-TIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGS 91
Query: 319 GDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWD-LRKM 377
D S+++W+L G R I GH+ D+ ++ FS D R ++S S D ++K+W+ L +
Sbjct: 92 WDHSVRLWDLSLGETIRSFI----GHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQC 147
Query: 378 KEPLKVFEDLPNNYAQTNVAFSP 400
K + D + T V FSP
Sbjct: 148 KYTIT---DQQHTDWITCVRFSP 167
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 52/189 (27%), Positives = 90/189 (47%)
Query: 312 KCIAGGIGDGSIQVWNLKPGWGSRPDIHVEK----GHSDDITALKFSSDGRILLSRSFDG 367
K I D + VWN+ S +I K GHS I + SSDG LS S+D
Sbjct: 36 KTIVSASRDKKLIVWNINTDDDSG-EIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDH 94
Query: 368 SLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLL-CFY-- 424
S+++WDL + E ++ F + + +V+FSPD + ++ + + L C Y
Sbjct: 95 SVRLWDL-SLGETIRSF--IGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTI 151
Query: 425 -DREKLELVSRVGISPACS---VVQCAWHPKLNQIFATAG---DKS-QGGTHILYDPRLS 476
D++ + ++ V SP+ + +V C W KL +++ +K+ +G T +L +S
Sbjct: 152 TDQQHTDWITCVRFSPSPNQAIIVSCGWD-KLVKVWNLKNCDLNKNLEGHTGVLNTVTIS 210
Query: 477 ERGALVCVA 485
G+L C +
Sbjct: 211 PDGSL-CAS 218
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 139 (54.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 43/143 (30%), Positives = 71/143 (49%)
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRV-AVTTCAWDCDGKCIAGGI 318
PK K TI+++S D L +W++N ++ K + G A+ + DG G
Sbjct: 33 PKLK-TIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGS 91
Query: 319 GDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWD-LRKM 377
D S+++W+L G R I GH+ D+ ++ FS D R ++S S D ++K+W+ L +
Sbjct: 92 WDHSVRLWDLSLGETIRSFI----GHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQC 147
Query: 378 KEPLKVFEDLPNNYAQTNVAFSP 400
K + D + T V FSP
Sbjct: 148 KYTIT---DQQHTDWITCVRFSP 167
Score = 128 (50.1 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 52/189 (27%), Positives = 90/189 (47%)
Query: 312 KCIAGGIGDGSIQVWNLKPGWGSRPDIHVEK----GHSDDITALKFSSDGRILLSRSFDG 367
K I D + VWN+ S +I K GHS I + SSDG LS S+D
Sbjct: 36 KTIVSASRDKKLIVWNINTDDDSG-EIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDH 94
Query: 368 SLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLL-CFY-- 424
S+++WDL + E ++ F + + +V+FSPD + ++ + + L C Y
Sbjct: 95 SVRLWDL-SLGETIRSF--IGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTI 151
Query: 425 -DREKLELVSRVGISPACS---VVQCAWHPKLNQIFATAG---DKS-QGGTHILYDPRLS 476
D++ + ++ V SP+ + +V C W KL +++ +K+ +G T +L +S
Sbjct: 152 TDQQHTDWITCVRFSPSPNQAIIVSCGWD-KLVKVWNLKNCDLNKNLEGHTGVLNTVTIS 210
Query: 477 ERGALVCVA 485
G+L C +
Sbjct: 211 PDGSL-CAS 218
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 64/256 (25%), Positives = 114/256 (44%)
Query: 146 KGHTKIVSALAVDHSGSRVLSGSYDYTV---------RMYDFQGMNSRLQSFRQLEPSEG 196
KGH +++L SG ++ SGS D +V R Y F G + Q PS
Sbjct: 15 KGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCV-QFSPS-A 72
Query: 197 HQVRNLS-------WSPT----SDRFLCVTGSAQAKIYDRDGLTL-----GEFVK-GDMY 239
H + + S W P+ S F TGS ++ + DG +L + +K ++
Sbjct: 73 HLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVH 132
Query: 240 IRDLKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPG 298
+ + T + H + C + P + +++ S+D ++++WD S +Q+I PG
Sbjct: 133 RQKIICTLREHNNWVRCARFSPDG-QLMVSVSDDRTVKLWDA----SSRQLIHT-FCEPG 186
Query: 299 RVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGR 358
+ + + CIA D +++VW+++ + + + HS + AL F G
Sbjct: 187 GYS-SYVDFHPSSTCIATASSDNTVRVWDIR----THTLLQHYQVHSAAVNALSFHPSGN 241
Query: 359 ILLSRSFDGSLKVWDL 374
LL+ S D +LK+ DL
Sbjct: 242 HLLTASSDSTLKILDL 257
Score = 140 (54.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 51/216 (23%), Positives = 101/216 (46%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH +TC ++ P + +SS D ++R+W V K + + + A G V + C +
Sbjct: 58 GHKDAVTCVQFSPSA-HLLASSSRDKTVRLW-VPSVKGESVLFR---AHTGSVR-SVC-F 110
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDG 367
DG+ + D SI++W++ + I + H++ + +FS DG++++S S D
Sbjct: 111 SADGQSLLTASDDQSIKLWSVH----RQKIICTLREHNNWVRCARFSPDGQLMVSVSDDR 166
Query: 368 SLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDRE 427
++K+WD ++ + F + P Y+ + V F P T +S ++T +D
Sbjct: 167 TVKLWDASS-RQLIHTFCE-PGGYS-SYVDFHPSSTCIATASS---DNTVR----VWDIR 216
Query: 428 KLELVSRVGISPACSVVQCAWHPKLNQIFATAGDKS 463
L+ + A +V ++HP N + + D +
Sbjct: 217 THTLLQHYQVHSA-AVNALSFHPSGNHLLTASSDST 251
Score = 136 (52.9 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 43/164 (26%), Positives = 82/164 (50%)
Query: 244 KNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVT 303
+N KGH +T ++ P K+ I + S D S+ +W++ K Q + + + AVT
Sbjct: 12 RNFKGHRDAITSLDFSPSGKQ-IASGSVDASVMVWNM---KPQSRAYR---FTGHKDAVT 64
Query: 304 TCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR 363
+ +A D ++++W P + + + + H+ + ++ FS+DG+ LL+
Sbjct: 65 CVQFSPSAHLLASSSRDKTVRLW--VPS--VKGESVLFRAHTGSVRSVCFSADGQSLLTA 120
Query: 364 SFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLT 407
S D S+K+W + + K + E NN+ + FSPD QL ++
Sbjct: 121 SDDQSIKLWSVHRQKIICTLREH--NNWVRC-ARFSPDGQLMVS 161
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 146 (56.5 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 56/199 (28%), Positives = 89/199 (44%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPG-RVAVTTCAWDCDGKCIAGGIGDGSIQ 324
+L + G +++WD+ E K + A G R + + G+ +A G D +++
Sbjct: 73 VLAGASSGVIKLWDLEESKMVR-------AFTGHRSNCSAVEFHPFGEFLASGSSDTNLR 125
Query: 325 VWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLR--KMKEPLK 382
VW+ + + I KGH+ I+ ++FS DGR ++S D +KVWDL K+ K
Sbjct: 126 VWDTR----KKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFK 181
Query: 383 VFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGISPACS 442
E P ++ F P E L TG S +R + F+D E EL+ A
Sbjct: 182 CHEG-PIR----SLDFHPLEFLLATG-SADRT------VKFWDLETFELIGTTR-PEATG 228
Query: 443 VVQCAWHPKLNQIFATAGD 461
V A+HP +F D
Sbjct: 229 VRAIAFHPDGQTLFCGLDD 247
Score = 129 (50.5 bits), Expect = 0.00017, P = 0.00017
Identities = 40/167 (23%), Positives = 77/167 (46%)
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA- 301
L+ H + C KT +LT +D + +W + + S + G +
Sbjct: 8 LQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLC-------GHTSP 60
Query: 302 VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILL 361
V + A++ + + G G I++W+L+ S+ + GH + +A++F G L
Sbjct: 61 VDSVAFNSEEVLVLAGASSGVIKLWDLEE---SKM-VRAFTGHRSNCSAVEFHPFGEFLA 116
Query: 362 SRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTG 408
S S D +L+VWD RK K ++ ++ + + + FSPD + ++G
Sbjct: 117 SGSSDTNLRVWDTRK-KGCIQTYKG--HTRGISTIEFSPDGRWVVSG 160
Score = 49 (22.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 138 PMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQ 179
PMS L GHT V ++A + VL+G+ ++++D +
Sbjct: 51 PMS----LCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLE 88
>UNIPROTKB|B4KKN1 [details] [associations]
symbol:GI17814 "Ribosome biogenesis protein WDR12 homolog"
species:7230 "Drosophila mojavensis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH933807
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002003253.1
ProteinModelPortal:B4KKN1 EnsemblMetazoa:FBtr0168539 GeneID:6577286
KEGG:dmo:Dmoj_GI17814 FlyBase:FBgn0140555 InParanoid:B4KKN1
Uniprot:B4KKN1
Length = 419
Score = 141 (54.7 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 55/251 (21%), Positives = 116/251 (46%)
Query: 141 NEIVLKGHT---KIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGH 197
+++ + GHT K V +++D+ R +S S D T M+ + ++ ++ + +GH
Sbjct: 136 HKLTIPGHTAPIKAVDWISLDNENGRFVSTSQDQTAMMWQWNIASNAVEC---VSVCKGH 192
Query: 198 Q--VRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKG---DMYIRDLKNT-KGHIC 251
+ V ++ SP + RF + KI+ + GE + +R + T +GH
Sbjct: 193 ERGVDSVCVSPDAQRFATGSWDTMLKIWSAELEDAGESTAKRAKESGVRTPRMTLQGHRE 252
Query: 252 GLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDG 311
++ +W T+LT S D +L++WD+N + IK +++ ++ +
Sbjct: 253 SISAVQW--MDNNTLLTGSWDHTLKVWDLN-----LEGIKTEIST--NKSIFDASHSKLN 303
Query: 312 KCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFS-SDGRILLSRSFDGSLK 370
I D ++++++ + GS GH+ + + +S ++ + +S ++D K
Sbjct: 304 NLIVTASADKNLRLYDARTNQGSVVR-STYLGHNAWVQTVMWSITEEFLFVSGAYDNQNK 362
Query: 371 VWDLRKMKEPL 381
+WD R K PL
Sbjct: 363 LWDCRSPKAPL 373
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 52/224 (23%), Positives = 99/224 (44%)
Query: 251 CGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQ--VIKPKLARPGRVAVTTCAWD 308
C C W+ +K T+++ S+D +L WD+N + V+K ++ + V+ +
Sbjct: 187 CTSVC--WNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEK-QVSDVRFH 243
Query: 309 CDGKCIAGGIG-DGSIQVWNLK-PGWGSRPDIHVEKGHSDDITALKFSSDGRILLSR-SF 365
+ + + D + V +++ P ++P V HS I ++ F+ +L+ S
Sbjct: 244 YKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVH-AHSGPIHSVAFNPHNDFILATCST 302
Query: 366 DGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYD 425
D ++ +WDLR + + L E + T ++FSP E+ L TS +R + L +
Sbjct: 303 DKTIALWDLRNLNQRLHTLEG--HEDIVTKISFSPHEEPILASTSADRRTLVWDLSRIGE 360
Query: 426 REKLE--------LVSRVGISPACSVVQCAWHPKLNQIFATAGD 461
+ E L+ G +C++ W P N ATA +
Sbjct: 361 DQPAEEAQDGPPELLFMHGGHTSCTI-DMDWCPNYNWTMATAAE 403
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 155 (59.6 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 70/274 (25%), Positives = 117/274 (42%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGH-QVRNL 202
VL+GH +V ++ V G ++SGS D + ++D + + +S QL G L
Sbjct: 419 VLRGHEDLVMSVDVSADGKHIISGSRDKSAMIWDLE----KKESIAQLTGHTGVISCVAL 474
Query: 203 SWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGD-MYIRDLKN----TK-GHICGLTCG 256
P++ F +T S I G + GD +D K TK H +
Sbjct: 475 PKKPSTSMF-AITASDDRTIKLWKGFSTTSSSGGDDSKKKDKKISASVTKIAHEKDINSI 533
Query: 257 EWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAG 316
P K T+S+D +++W+VN + + K R G V D +C
Sbjct: 534 SIAPNDK-IFATASQDSYVKLWNVNNLEPITSI---KAHRRGVWHVEFSPID---QCFLT 586
Query: 317 GIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRK 376
DG+I++W+L + +GH + F S G ++S + +G +K+W++ K
Sbjct: 587 CSADGTIKIWSLS----DYTCLKTLEGHKGSVLKASFISFGMQIVSVASEGLIKLWNI-K 641
Query: 377 MKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTS 410
E L FE + +VA D++ F+TG S
Sbjct: 642 TNECLNTFEGHESKIWALSVA--KDQERFITGGS 673
Score = 38 (18.4 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 489 RKKSVDDFEVAPVIHNPHALPLFRDQ-------PSRKRQREKLLKDPIKSHKPEV 536
+K + DF + + NP A L D+ + K+ ++L+K+P K K +
Sbjct: 828 QKTYLIDFTIQSI--NPAASTLSMDRVETSHIDQNYKKSLDQLIKEPTKPMKKSI 880
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 47/217 (21%), Positives = 89/217 (41%)
Query: 226 DGLTLGEFVKGDMY-IRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFK 284
D L F++ + ++ + + GH+ +W P+ +LT ++ +W +
Sbjct: 188 DPQALAIFLRDEQARVKPIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGG 247
Query: 285 SQKQVIKPKLARPGRVAVTTCAWD-CDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKG 343
S +P + +V W + A D SI++W+++ G +
Sbjct: 248 SWNVDQRPFVGHTR--SVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAA 305
Query: 344 HSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKE--PLKVFEDLPNNYAQTNVAFSPD 401
H D+ + +S LLS DG+LKVWDLR+ K P+ F+ + T+V + P
Sbjct: 306 HDGDVNVISWSRREPFLLSGGDDGTLKVWDLRQFKSGSPVATFKQ--HVAPVTSVEWHPQ 363
Query: 402 EQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGIS 438
+ + + + T L D E E + G++
Sbjct: 364 DSGVFAASGADNQITQWDLAVERDPESGETETDPGLA 400
>DICTYBASE|DDB_G0292592 [details] [associations]
symbol:lst8 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0043520 "regulation of
myosin II filament assembly" evidence=IMP] [GO:0043327 "chemotaxis
to cAMP" evidence=IMP] [GO:0032148 "activation of protein kinase B
activity" evidence=IMP] [GO:0031932 "TORC2 complex" evidence=IDA]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP] [GO:0030838 "positive regulation of actin filament
polymerization" evidence=IMP] [GO:0007190 "activation of adenylate
cyclase activity" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292592 GO:GO:0005737
GenomeReviews:CM000155_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AAFI02000194 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007190 GO:GO:0032148
GO:GO:0030838 GO:GO:0031152 GO:GO:0031932 HSSP:P16649 KO:K08266
GO:GO:0043327 GO:GO:0043520 OMA:NNKGNCY RefSeq:XP_629512.1
ProteinModelPortal:Q54D08 STRING:Q54D08 PRIDE:Q54D08
EnsemblProtists:DDB0233210 GeneID:8628763 KEGG:ddi:DDB_G0292592
ProtClustDB:CLSZ2429378 Uniprot:Q54D08
Length = 304
Score = 133 (51.9 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 40/154 (25%), Positives = 72/154 (46%)
Query: 259 HPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGI 318
HP E +++ ++GS+R+WD+ ++++ P G V +T+ DG +
Sbjct: 126 HPNQAE-LISGDQNGSIRVWDLISNTCSRELV-PD----GEVGITSLTISSDGGLVVASN 179
Query: 319 GDGSIQVWNLKPGWGSRPD-IHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKM 377
G VW L SR + + + H+ I FS D ++L + S D ++K+W+ +K
Sbjct: 180 TKGKCFVWRLGEDDTSRFEPLQKIEAHNAPILKTLFSPDTKLLATCSADHTVKIWNTKKF 239
Query: 378 KEPLKVFEDLPNNYAQT-NVAFSPDEQLFLTGTS 410
V + L + + AFS D +TG+S
Sbjct: 240 N----VVQTLNGHQRWVWDCAFSNDSAYLVTGSS 269
Score = 121 (47.7 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 50/164 (30%), Positives = 77/164 (46%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH +T G K + + T SEDG+++IWD+ Q+ + + P V T
Sbjct: 74 GHKGNVT-GVGFQKEGKWMYTGSEDGTVKIWDLKAPGCQRDY---ECSAP----VNTVVL 125
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDG 367
+ + G +GSI+VW+L SR ++ V G IT+L SSDG ++++ + G
Sbjct: 126 HPNQAELISGDQNGSIRVWDLISNTCSR-EL-VPDGEVG-ITSLTISSDGGLVVASNTKG 182
Query: 368 SLKVWDLRKMK----EPLKVFEDLPNNYAQTNVAFSPDEQLFLT 407
VW L + EPL+ E +N FSPD +L T
Sbjct: 183 KCFVWRLGEDDTSRFEPLQKIE--AHNAPILKTLFSPDTKLLAT 224
Score = 46 (21.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 14/65 (21%), Positives = 32/65 (49%)
Query: 161 GSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSWSPTSDR-FLCVTGSAQ 219
G + + SYD+T++ +D +R ++ E H + L T D+ ++ G+ Q
Sbjct: 3 GIILATASYDHTIKFWDPPSGGC----YRSIDCGEFH-INRLEI--THDKLYIAAAGNPQ 55
Query: 220 AKIYD 224
++++
Sbjct: 56 TRLFE 60
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 135 (52.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 50/171 (29%), Positives = 80/171 (46%)
Query: 242 DLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
DL +T H + C + K + T + S +I+DVN + + G +
Sbjct: 291 DLVHTLQHESVVCCVRFSADGKY-VATGC-NRSAQIFDVNTGEKVCVLQDDNADTTGDLY 348
Query: 302 VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVE-KGHSDDITALKFSSDGRIL 360
+ + + DGK +A G D I+VW++ +R I ++ GH DI +L F+ DGR +
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDIT----TRT-IRIQFAGHEQDIYSLDFARDGRTI 403
Query: 361 LSRSFDGSLKVWDLRKMKEPLKVF--EDLPNNYAQTNVAFSPDEQLFLTGT 409
S S D ++++WD+ L VF ED T VA SPD + G+
Sbjct: 404 ASGSGDRTVRLWDIEN-GTALTVFTIED-----GVTTVAISPDTKYVAAGS 448
Score = 134 (52.2 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 47/156 (30%), Positives = 77/156 (49%)
Query: 265 TILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQ 324
TI + S D ++R+WD+ E + V G VTT A D K +A G D S++
Sbjct: 402 TIASGSGDRTVRLWDI-ENGTALTVFT---IEDG---VTTVAISPDTKYVAAGSLDKSVR 454
Query: 325 VWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLR----KMKEP 380
VW+L G + GH D + ++ FS +GR L++ S D ++K+W+L M+
Sbjct: 455 VWDLTQGCPVER-LEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQ 513
Query: 381 -------LKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
+K FE ++ +VA +PD Q ++G+
Sbjct: 514 GSKGGRCVKTFEG-HRDFV-LSVALTPDNQWVMSGS 547
Score = 54 (24.1 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 81 LKADDGDVMIGPPRPPQQQEDDADSV------MIGPPRPP 114
+ G + PP PPQ+Q+ + + GPP PP
Sbjct: 124 MSGQTGQPLAPPPPPPQEQQPPQHQMAQPPPGLSGPPPPP 163
Score = 37 (18.1 bits), Expect = 8.1e-06, Sum P(3) = 8.1e-06
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 152 VSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQ 186
+ ++ G + +G+ D +R++D R+Q
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQ 383
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 140 (54.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 60/279 (21%), Positives = 123/279 (44%)
Query: 142 EIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRN 201
E LKGHT V ++ DH+G + S S D T++++DFQG + R + + H V +
Sbjct: 143 ERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGF----ECIRTMHGHD-HNVSS 197
Query: 202 LSWSPTSDRFLCVTGSAQAKIYD-RDGLTLGEFVKGDMYIRDLK-NTKGHICGLTCGEWH 259
++ P D + + K+++ G + F ++R ++ N G + + +
Sbjct: 198 VAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSND-- 255
Query: 260 PKTKETILTSSEDGSLRIWDVNEFKSQKQVIK--PKLARPGRVAVTTCAWDCDGK---CI 314
+T + ++++ ++ E + + I P+ A P + T GK +
Sbjct: 256 -QTVRVWVVATKECKA---ELREHEHVVECISWAPESAHPTILEATGSETKKSGKPGPFL 311
Query: 315 AGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDL 374
G D +I++W++ G + GH + + + G+ ++S + D +L++WD
Sbjct: 312 LSGSRDKTIKMWDVSIGMCLMTLV----GHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 375 RKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 413
K K K + + T++ F +TG SV++
Sbjct: 368 -KNKRCTKTLS--AHEHFVTSLDFHKTAPYVVTG-SVDQ 402
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 146 (56.5 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 239 YIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPG 298
+I L+ GH+ +HP + T S D S R+W++ ++ K V ++
Sbjct: 752 HISPLRIFTGHLSDCNTVRFHPNINY-LATGSNDKSARLWEI---QTGKCV---RIFMGH 804
Query: 299 RVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGR 358
R + T A+ DG+ +A D S+ +W+L G + GH+ + +L FS DG
Sbjct: 805 RAPIYTVAFSPDGRLLATAGEDTSVILWDLSTG----KKVKKMDGHTKCVYSLDFSCDGS 860
Query: 359 ILLSRSFDGSLKVWDLRK 376
IL S S D ++++WD++K
Sbjct: 861 ILASGSSDCTVRLWDVKK 878
Score = 47 (21.6 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 139 MSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMY 176
MSN + KGH V ++ G + S+D T R++
Sbjct: 711 MSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLW 748
Score = 43 (20.2 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 8/36 (22%), Positives = 21/36 (58%)
Query: 15 TPLEKIHNATRRSDPLTTTTAATDNEKNNLPSISSS 50
TP+ + ++ + P+T TT + N +N+ ++ ++
Sbjct: 110 TPITAVPSSAS-AIPITATTTISPNTSSNITALPTT 144
Score = 40 (19.1 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 12/46 (26%), Positives = 20/46 (43%)
Query: 15 TPLEKIHNATRRSDPLTTTTAATDNE--KNNLPSISSSSKEWLGTL 58
TP T + P T+++++T N N + S + K L L
Sbjct: 151 TPTTTAATTTTTTTPTTSSSSSTTNAPTSNEVKSAQTKDKYDLAVL 196
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 122 (48.0 bits), Expect = 0.00028, P = 0.00028
Identities = 69/291 (23%), Positives = 121/291 (41%)
Query: 145 LKGHTKIVSALAVDHS-GSRVLSGSYDYTVRMYD---------FQGMNSRLQ--SFRQLE 192
L+GH +V A+A ++ G ++ +GS+D T +++ F+G + + SF
Sbjct: 130 LEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQS 189
Query: 193 P--SEGHQVRNLS-WSPTS-DRFLCVTGSAQAKI---YDRDG--LTLGEF----VKGDMY 239
+ G W S + + +TG I +D G + G F V D
Sbjct: 190 TVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDAS 249
Query: 240 I-RDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPG 298
R + GH C ILT S D + +WD K +
Sbjct: 250 TGRKVHTLIGH-CAEISSALFSWDCSLILTGSMDKTCMLWDATSGKC----VATLTGHDD 304
Query: 299 RVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGR 358
+ + +C +D GK IA DG+ +V+N +R I +GH +I+ + F+ G
Sbjct: 305 EI-LDSC-FDYTGKLIATASADGTARVYNAT----TRKCITKLEGHEGEISKISFNPQGN 358
Query: 359 ILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT 409
LL+ S D + ++WD++ + L+V E + + AF+ + +TG+
Sbjct: 359 RLLTGSSDKTARIWDVQT-GQCLQVLEGHTDEIF--SCAFNYKGNIVITGS 406
Score = 102 (41.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 34/147 (23%), Positives = 65/147 (44%)
Query: 264 ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSI 323
+ I+T S D ++ +WD S + + + ++ +WDC I G D +
Sbjct: 232 DRIITGSFDHTVVVWDA----STGRKVHTLIGHCAEISSALFSWDCS--LILTGSMDKTC 285
Query: 324 QVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKV 383
+W+ G + GH D+I F G+++ + S DG+ +V++ K K+
Sbjct: 286 MLWDATSG----KCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKL 341
Query: 384 FEDLPNNYAQTNVAFSPDEQLFLTGTS 410
E ++ ++F+P LTG+S
Sbjct: 342 -EGHEGEISK--ISFNPQGNRLLTGSS 365
Score = 84 (34.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 137 IPMSNEIV-LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD 177
I E+V L GH + +L+ D SG R+++GS+D+TV ++D
Sbjct: 206 IQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWD 247
Score = 70 (29.7 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 31/122 (25%), Positives = 58/122 (47%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
VL+ H ++ +A++ +GS ++GSYD T +++D S +L EGH+ V
Sbjct: 87 VLRAHILPLTNVALNKAGSCFITGSYDRTCKVWD-------TASGEELHTLEGHRNVVYA 139
Query: 202 LSWS-PTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHP 260
++++ P D+ TGS +D+ L G Y +GH + C ++P
Sbjct: 140 IAFNNPYGDKI--ATGS-----FDKT-CKLWSAETGKCY----HTFRGHTAEIVCLSFNP 187
Query: 261 KT 262
++
Sbjct: 188 QS 189
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 139 (54.0 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 62/234 (26%), Positives = 103/234 (44%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRNL 202
+ GHT+ V A G +S D TVR++D + + +GH V +
Sbjct: 136 MSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWD-------IYTSTPTHTLKGHTNWVLQV 188
Query: 203 SWSPTSDRFLCVTGSAQAKIY-DRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPK 261
+WSP S + +I+ + G LG +KG +TK I GL+ +H
Sbjct: 189 AWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKG--------HTK-FITGLSWEPFHLN 239
Query: 262 TK-ETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCA-WDCDGKCIAGGIG 319
K + +SS+D ++RIWD K+ ++ G TC W +G I G
Sbjct: 240 PKCVRLASSSKDSTIRIWDTESCKNL-------MSLSGHTMSVTCLKWGGEG-LIYSGSQ 291
Query: 320 DGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWD 373
D +++V+N G R + V GH+ + L ++D +L + S+D + K +D
Sbjct: 292 DRTVRVFNTTDG---RL-VRVLDGHAHWVNTLALNTD-YVLRTGSYDHTGKEYD 340
Score = 47 (21.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 553 SLLTQYLLKQGGMI---KE-TWMEEDPREAILKYADVAAK 588
+L T Y+L+ G KE +EE R A+ +Y DV AK
Sbjct: 320 ALNTDYVLRTGSYDHTGKEYDTLEEAQRVALERYNDVKAK 359
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 143 (55.4 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 55/187 (29%), Positives = 93/187 (49%)
Query: 201 NLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIR--DLKNTK------GHICG 252
N S SP+SD ++ ++ + DG L + D IR D++N K GH
Sbjct: 435 NTSSSPSSDLYI------RSVCFSPDGKFLATGAE-DRLIRIWDIENRKIVMILQGHEQD 487
Query: 253 LTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDC-DG 311
+ ++ P + + +++ S D ++RIWD+ + L VTT A DG
Sbjct: 488 IYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQCS-------LTLSIEDGVTTVAVSPGDG 539
Query: 312 KCIAGGIGDGSIQVWNLKPGW-GSRPDIHVEKG--HSDDITALKFSSDGRILLSRSFDGS 368
K IA G D +++VW+ + G+ R D E G H D + ++ F+ DG+ ++S S D S
Sbjct: 540 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 599
Query: 369 LKVWDLR 375
+K+W+L+
Sbjct: 600 VKLWNLQ 606
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 142 (55.0 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 87/332 (26%), Positives = 143/332 (43%)
Query: 137 IPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDF-QGMNSRLQSFRQ----- 190
IP S+ +L+GHT V A A S S + SGS D T R++ +G + + R
Sbjct: 253 IPNSDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALI 312
Query: 191 LEPSEGHQ------VRNLSWSPTSDRFLCVTGSA--QAKIYDRDGLTLGEFVKGDMYIRD 242
L+ ++G V L W+ + L TGS QA+I+ TL G++ I
Sbjct: 313 LKHAKGKSNEKSKDVTTLDWN--GEGTLLATGSCDGQARIW-----TLN----GEL-IST 360
Query: 243 LKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVN--EFKSQKQVIK-PKLARPGR 299
L KG I L +W+ K + +LT S D + +WDV E+K Q + P L R
Sbjct: 361 LSKHKGPIFSL---KWNKKG-DYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR 416
Query: 300 VAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRI 359
V+ D IG+ +RP GH ++ +K+ G +
Sbjct: 417 NNVSFATSSTDSMIYLCKIGE-------------TRP-AKTFTGHQGEVNCVKWDPTGSL 462
Query: 360 LLSRSFDGSLKVWDLRK------MKEPLKVFEDLPNNYAQTNVAFS-PDEQLFLTGTSVE 412
L S S D + K+W++++ ++E K + ++ T + P++QL L S +
Sbjct: 463 LASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTI--RWSPTGPGTNNPNKQLTLASASFD 520
Query: 413 R-----ESTTGGLLCFYDREKLELVSRVGISP 439
++ G +LC ++ + E V + SP
Sbjct: 521 STVKLWDAELGKMLCSFNGHR-EPVYSLAFSP 551
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 110 (43.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 31/128 (24%), Positives = 63/128 (49%)
Query: 247 KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA-VTTC 305
+GH + C ++P++ + T S D + ++WD+ +S ++V G A + +
Sbjct: 174 RGHTAEIVCLSFNPQST-LVATGSMDTTAKLWDI---QSGEEVF----TLTGHSAEIISL 225
Query: 306 AWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSF 365
+++ G I G D ++ VW G ++ GH +I++ F+ D ++L+ S
Sbjct: 226 SFNTSGNRIITGSFDHTVTVWEADTG----RKVYTLIGHCAEISSAVFNWDCSLILTGSM 281
Query: 366 DGSLKVWD 373
D + K+WD
Sbjct: 282 DKTCKLWD 289
Score = 95 (38.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 25/111 (22%), Positives = 56/111 (50%)
Query: 262 TKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDG 321
T + I T+S DG+ RI+ + ++ + G ++ +++ G + G D
Sbjct: 314 TGKLIATASADGTARIFSA----ATRECVTKLEGHEGEIS--KISFNPQGNRLLTGSSDK 367
Query: 322 SIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVW 372
+ ++W+ + G + V +GH+D+I + F+ G I+++ S D + ++W
Sbjct: 368 TARIWDAQTG----QCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 91 (37.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 31/145 (21%), Positives = 63/145 (43%)
Query: 266 ILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQV 325
I+T S D ++ +W+ + + +I ++ WDC I G D + ++
Sbjct: 234 IITGSFDHTVTVWEADTGRKVYTLI----GHCAEISSAVFNWDCS--LILTGSMDKTCKL 287
Query: 326 WNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFE 385
W+ G + GH D+I F G+++ + S DG+ +++ +E + E
Sbjct: 288 WDAVNG----KCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAAT-RECVTKLE 342
Query: 386 DLPNNYAQTNVAFSPDEQLFLTGTS 410
++ ++F+P LTG+S
Sbjct: 343 GHEGEISK--ISFNPQGNRLLTGSS 365
Score = 76 (31.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 14/42 (33%), Positives = 29/42 (69%)
Query: 137 IPMSNEI-VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYD 177
I E+ L GH+ + +L+ + SG+R+++GS+D+TV +++
Sbjct: 206 IQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWE 247
Score = 75 (31.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 32/122 (26%), Positives = 58/122 (47%)
Query: 144 VLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQ--VRN 201
VL+ H ++ +A++ SGS ++GSYD T +++D S +L EGH+ V
Sbjct: 87 VLRAHILPLTNVALNKSGSCFITGSYDRTCKLWD-------TASGEELHTLEGHRNVVYA 139
Query: 202 LSWS-PTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHP 260
++++ P D+ TGS +D+ L G Y +GH + C ++P
Sbjct: 140 IAFNNPYGDKI--ATGS-----FDKT-CKLWSVETGKCY----HTFRGHTAEIVCLSFNP 187
Query: 261 KT 262
++
Sbjct: 188 QS 189
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 139 (54.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 54/213 (25%), Positives = 96/213 (45%)
Query: 248 GHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAW 307
GH G+T + P + I TSS D ++ +W++N+ + + + + P V AW
Sbjct: 16 GHSGGITQLRFGPDGAQ-IATSSTDSTVILWNLNQ--AARCIRFASHSAP----VNGVAW 68
Query: 308 DCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDG 367
G +A D ++++W K S + HS + ++ F S G ++L+ S D
Sbjct: 69 SPKGNLVASAGHDRTVKIWEPKLRGVSGEFV----AHSKAVRSVDFDSTGHLMLTASDDK 124
Query: 368 SLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDRE 427
S K+W + + ++ + F NN+ ++ FSP+ +L T + + +S YD +
Sbjct: 125 SAKIWRVAR-RQFVSSFAQ-QNNWVRS-AKFSPNGKLVATAS--DDKSVR-----IYDVD 174
Query: 428 KLELVSRVGISPACSVVQCAWHPKLNQIFATAG 460
E V R + Q AWHP N + G
Sbjct: 175 SGECV-RTFTEERAAPRQLAWHPWGNMLAVALG 206
Score = 114 (45.2 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 49/185 (26%), Positives = 87/185 (47%)
Query: 257 EWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAG 316
++ P K + T+S+D S+RI+DV+ + + + + A P ++A W G +A
Sbjct: 151 KFSPNGK-LVATASDDKSVRIYDVDSGECVRTFTEERAA-PRQLA-----WHPWGNMLAV 203
Query: 317 GIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRK 376
+G I+++++ GS+ + + HS + + F G LLS S D ++++ DL +
Sbjct: 204 ALGCNRIKIFDVS---GSQL-LQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLE 259
Query: 377 MKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVG 436
+ P+ + A VAFS D F TG S + L YD + E S +
Sbjct: 260 GR-PIYTLTG--HTDAVNAVAFSRDGDKFATGGSDRQLLVWQSNLHTYDASQFEAKSALA 316
Query: 437 ISPAC 441
S +C
Sbjct: 317 -SSSC 320
Score = 50 (22.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 17/76 (22%), Positives = 34/76 (44%)
Query: 148 HTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSWSPT 207
H+ V+ +A G+ V S +D TV++++ +L+ + VR++ + T
Sbjct: 59 HSAPVNGVAWSPKGNLVASAGHDRTVKIWE-----PKLRGVSGEFVAHSKAVRSVDFDST 113
Query: 208 SDRFLCVTGSAQAKIY 223
L + AKI+
Sbjct: 114 GHLMLTASDDKSAKIW 129
>TAIR|locus:2062994 [details] [associations]
symbol:AT2G46290 "AT2G46290" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009506 EMBL:CP002685 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003743 GO:GO:0080008
KO:K03246 OMA:ATVAGWS IPI:IPI00519717 RefSeq:NP_182152.2
UniGene:At.36529 ProteinModelPortal:F4II66 SMR:F4II66 PRIDE:F4II66
EnsemblPlants:AT2G46290.1 GeneID:819237 KEGG:ath:AT2G46290
Uniprot:F4II66
Length = 355
Score = 138 (53.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 63/240 (26%), Positives = 108/240 (45%)
Query: 143 IVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNL 202
I++KGH + ++ L + +G + S + D+T ++ F RL ++R GH
Sbjct: 31 ILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVW-FADNGERLGTYR------GHSGAVW 83
Query: 203 SWSPTSDRFLCVTGSAQ--AKIYD-RDGLTLGEFVKGDMYIRDLKNTKG-HICGLTCGEW 258
+ D +TGSA AK++D + G L F G R + + G H+ +T
Sbjct: 84 CCDISRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAP-ARSVDFSVGDHLAVIT---- 138
Query: 259 HPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARP-GRVAVTTCAWDCDGKCIAGG 317
T + TSS RI + E + V+ L P G+ + W + I G
Sbjct: 139 ---TDHFVGTSSAIHVKRIAEDPEDQVGDSVLV--LQSPDGKKKINRAVWGPLNQTIVSG 193
Query: 318 IGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKM 377
D +I++W+ + G + E GH + IT+L ++D L+ S D + K+WD+R +
Sbjct: 194 GEDAAIRIWDAETGKLLKQSDE-EVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTL 252
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 137 (53.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 38/133 (28%), Positives = 71/133 (53%)
Query: 243 LKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
L+ T KGH +T P+ + IL++S D ++ +W + ++ + P+ A G
Sbjct: 7 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGI--PQRALRGHSH 64
Query: 302 -VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL 360
V+ DG+ G DG++++W+L G +R + GH+ D+ ++ FSSD R +
Sbjct: 65 FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV----GHTKDVLSVAFSSDNRQI 120
Query: 361 LSRSFDGSLKVWD 373
+S S D ++K+W+
Sbjct: 121 VSGSRDKTIKLWN 133
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 54/182 (29%), Positives = 88/182 (48%)
Query: 320 DGSIQVWNL---KPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRK 376
D +I +W L + +G P +GHS ++ + SSDG+ LS S+DG+L++WDL
Sbjct: 37 DKTIIMWKLTRDETNYGI-PQ-RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT 94
Query: 377 MKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT---SVERESTTGGLLCFY---DREKLE 430
+ + + +VAFS D + ++G+ +++ +T G +C Y D E
Sbjct: 95 GTTTRRF---VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG--VCKYTVQDESHSE 149
Query: 431 LVSRVGISPACS---VVQCAWHPKLNQIFATAGDKSQ----GGTHILYDPRLSERGALVC 483
VS V SP S +V C W KL +++ A K + G T L +S G+L C
Sbjct: 150 WVSCVRFSPNSSNPIIVSCGWD-KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL-C 207
Query: 484 VA 485
+
Sbjct: 208 AS 209
Score = 87 (35.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQ-GMNSRLQSFRQLEPSEGHQVRNLS 203
L+GH+ VS + + G LSGS+D T+R++D G +R F GH LS
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR--RF------VGHTKDVLS 110
Query: 204 WSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
+ +SD V+GS I + L + ++ ++D + H ++C + P +
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT-----VQD----ESHSEWVSCVRFSPNSS 161
Query: 264 ETILTSSE-DGSLRIWDVNEFK 284
I+ S D +++W++ K
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCK 183
Score = 77 (32.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 267 LTSSEDGSLRIWD------VNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGD 320
L ++ S++IWD V+E K Q+ + A P + T+ AW DG+ + G D
Sbjct: 248 LCAATGPSIKIWDLEGKIIVDELK-QEVISTSSKAEPPQC--TSLAWSADGQTLFAGYTD 304
Query: 321 GSIQVWNLKPG 331
++VW + G
Sbjct: 305 NLVRVWQVTIG 315
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 137 (53.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 38/133 (28%), Positives = 71/133 (53%)
Query: 243 LKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
L+ T KGH +T P+ + IL++S D ++ +W + ++ + P+ A G
Sbjct: 7 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGI--PQRALRGHSH 64
Query: 302 -VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL 360
V+ DG+ G DG++++W+L G +R + GH+ D+ ++ FSSD R +
Sbjct: 65 FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV----GHTKDVLSVAFSSDNRQI 120
Query: 361 LSRSFDGSLKVWD 373
+S S D ++K+W+
Sbjct: 121 VSGSRDKTIKLWN 133
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 54/182 (29%), Positives = 88/182 (48%)
Query: 320 DGSIQVWNL---KPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRK 376
D +I +W L + +G P +GHS ++ + SSDG+ LS S+DG+L++WDL
Sbjct: 37 DKTIIMWKLTRDETNYGI-PQ-RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT 94
Query: 377 MKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT---SVERESTTGGLLCFY---DREKLE 430
+ + + +VAFS D + ++G+ +++ +T G +C Y D E
Sbjct: 95 GTTTRRF---VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG--VCKYTVQDESHSE 149
Query: 431 LVSRVGISPACS---VVQCAWHPKLNQIFATAGDKSQ----GGTHILYDPRLSERGALVC 483
VS V SP S +V C W KL +++ A K + G T L +S G+L C
Sbjct: 150 WVSCVRFSPNSSNPIIVSCGWD-KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL-C 207
Query: 484 VA 485
+
Sbjct: 208 AS 209
Score = 87 (35.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQ-GMNSRLQSFRQLEPSEGHQVRNLS 203
L+GH+ VS + + G LSGS+D T+R++D G +R F GH LS
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR--RF------VGHTKDVLS 110
Query: 204 WSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
+ +SD V+GS I + L + ++ ++D + H ++C + P +
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT-----VQD----ESHSEWVSCVRFSPNSS 161
Query: 264 ETILTSSE-DGSLRIWDVNEFK 284
I+ S D +++W++ K
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCK 183
Score = 77 (32.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 267 LTSSEDGSLRIWD------VNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGD 320
L ++ S++IWD V+E K Q+ + A P + T+ AW DG+ + G D
Sbjct: 248 LCAATGPSIKIWDLEGKIIVDELK-QEVISTSSKAEPPQC--TSLAWSADGQTLFAGYTD 304
Query: 321 GSIQVWNLKPG 331
++VW + G
Sbjct: 305 NLVRVWQVTIG 315
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 137 (53.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 38/133 (28%), Positives = 71/133 (53%)
Query: 243 LKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
L+ T KGH +T P+ + IL++S D ++ +W + ++ + P+ A G
Sbjct: 7 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGI--PQRALRGHSH 64
Query: 302 -VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL 360
V+ DG+ G DG++++W+L G +R + GH+ D+ ++ FSSD R +
Sbjct: 65 FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV----GHTKDVLSVAFSSDNRQI 120
Query: 361 LSRSFDGSLKVWD 373
+S S D ++K+W+
Sbjct: 121 VSGSRDKTIKLWN 133
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 54/182 (29%), Positives = 88/182 (48%)
Query: 320 DGSIQVWNL---KPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRK 376
D +I +W L + +G P +GHS ++ + SSDG+ LS S+DG+L++WDL
Sbjct: 37 DKTIIMWKLTRDETNYGI-PQ-RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT 94
Query: 377 MKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT---SVERESTTGGLLCFY---DREKLE 430
+ + + +VAFS D + ++G+ +++ +T G +C Y D E
Sbjct: 95 GTTTRRF---VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG--VCKYTVQDESHSE 149
Query: 431 LVSRVGISPACS---VVQCAWHPKLNQIFATAGDKSQ----GGTHILYDPRLSERGALVC 483
VS V SP S +V C W KL +++ A K + G T L +S G+L C
Sbjct: 150 WVSCVRFSPNSSNPIIVSCGWD-KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL-C 207
Query: 484 VA 485
+
Sbjct: 208 AS 209
Score = 87 (35.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQ-GMNSRLQSFRQLEPSEGHQVRNLS 203
L+GH+ VS + + G LSGS+D T+R++D G +R F GH LS
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR--RF------VGHTKDVLS 110
Query: 204 WSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
+ +SD V+GS I + L + ++ ++D + H ++C + P +
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT-----VQD----ESHSEWVSCVRFSPNSS 161
Query: 264 ETILTSSE-DGSLRIWDVNEFK 284
I+ S D +++W++ K
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCK 183
Score = 77 (32.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 267 LTSSEDGSLRIWD------VNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGD 320
L ++ S++IWD V+E K Q+ + A P + T+ AW DG+ + G D
Sbjct: 248 LCAATGPSIKIWDLEGKIIVDELK-QEVISTSSKAEPPQC--TSLAWSADGQTLFAGYTD 304
Query: 321 GSIQVWNLKPG 331
++VW + G
Sbjct: 305 NLVRVWQVTIG 315
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 137 (53.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 38/133 (28%), Positives = 71/133 (53%)
Query: 243 LKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
L+ T KGH +T P+ + IL++S D ++ +W + ++ + P+ A G
Sbjct: 7 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGI--PQRALRGHSH 64
Query: 302 -VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL 360
V+ DG+ G DG++++W+L G +R + GH+ D+ ++ FSSD R +
Sbjct: 65 FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV----GHTKDVLSVAFSSDNRQI 120
Query: 361 LSRSFDGSLKVWD 373
+S S D ++K+W+
Sbjct: 121 VSGSRDKTIKLWN 133
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 54/182 (29%), Positives = 88/182 (48%)
Query: 320 DGSIQVWNL---KPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRK 376
D +I +W L + +G P +GHS ++ + SSDG+ LS S+DG+L++WDL
Sbjct: 37 DKTIIMWKLTRDETNYGI-PQ-RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT 94
Query: 377 MKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT---SVERESTTGGLLCFY---DREKLE 430
+ + + +VAFS D + ++G+ +++ +T G +C Y D E
Sbjct: 95 GTTTRRF---VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG--VCKYTVQDESHSE 149
Query: 431 LVSRVGISPACS---VVQCAWHPKLNQIFATAGDKSQ----GGTHILYDPRLSERGALVC 483
VS V SP S +V C W KL +++ A K + G T L +S G+L C
Sbjct: 150 WVSCVRFSPNSSNPIIVSCGWD-KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL-C 207
Query: 484 VA 485
+
Sbjct: 208 AS 209
Score = 87 (35.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQ-GMNSRLQSFRQLEPSEGHQVRNLS 203
L+GH+ VS + + G LSGS+D T+R++D G +R F GH LS
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR--RF------VGHTKDVLS 110
Query: 204 WSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
+ +SD V+GS I + L + ++ ++D + H ++C + P +
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT-----VQD----ESHSEWVSCVRFSPNSS 161
Query: 264 ETILTSSE-DGSLRIWDVNEFK 284
I+ S D +++W++ K
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCK 183
Score = 77 (32.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 267 LTSSEDGSLRIWD------VNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGD 320
L ++ S++IWD V+E K Q+ + A P + T+ AW DG+ + G D
Sbjct: 248 LCAATGPSIKIWDLEGKIIVDELK-QEVISTSSKAEPPQC--TSLAWSADGQTLFAGYTD 304
Query: 321 GSIQVWNLKPG 331
++VW + G
Sbjct: 305 NLVRVWQVTIG 315
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 137 (53.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 38/133 (28%), Positives = 71/133 (53%)
Query: 243 LKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
L+ T KGH +T P+ + IL++S D ++ +W + ++ + P+ A G
Sbjct: 7 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGI--PQRALRGHSH 64
Query: 302 -VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL 360
V+ DG+ G DG++++W+L G +R + GH+ D+ ++ FSSD R +
Sbjct: 65 FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV----GHTKDVLSVAFSSDNRQI 120
Query: 361 LSRSFDGSLKVWD 373
+S S D ++K+W+
Sbjct: 121 VSGSRDKTIKLWN 133
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 54/182 (29%), Positives = 88/182 (48%)
Query: 320 DGSIQVWNL---KPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRK 376
D +I +W L + +G P +GHS ++ + SSDG+ LS S+DG+L++WDL
Sbjct: 37 DKTIIMWKLTRDETNYGI-PQ-RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT 94
Query: 377 MKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT---SVERESTTGGLLCFY---DREKLE 430
+ + + +VAFS D + ++G+ +++ +T G +C Y D E
Sbjct: 95 GTTTRRF---VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG--VCKYTVQDESHSE 149
Query: 431 LVSRVGISPACS---VVQCAWHPKLNQIFATAGDKSQ----GGTHILYDPRLSERGALVC 483
VS V SP S +V C W KL +++ A K + G T L +S G+L C
Sbjct: 150 WVSCVRFSPNSSNPIIVSCGWD-KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL-C 207
Query: 484 VA 485
+
Sbjct: 208 AS 209
Score = 87 (35.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQ-GMNSRLQSFRQLEPSEGHQVRNLS 203
L+GH+ VS + + G LSGS+D T+R++D G +R F GH LS
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR--RF------VGHTKDVLS 110
Query: 204 WSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
+ +SD V+GS I + L + ++ ++D + H ++C + P +
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT-----VQD----ESHSEWVSCVRFSPNSS 161
Query: 264 ETILTSSE-DGSLRIWDVNEFK 284
I+ S D +++W++ K
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCK 183
Score = 77 (32.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 267 LTSSEDGSLRIWD------VNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGD 320
L ++ S++IWD V+E K Q+ + A P + T+ AW DG+ + G D
Sbjct: 248 LCAATGPSIKIWDLEGKIIVDELK-QEVISTSSKAEPPQC--TSLAWSADGQTLFAGYTD 304
Query: 321 GSIQVWNLKPG 331
++VW + G
Sbjct: 305 NLVRVWQVTIG 315
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 137 (53.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 38/133 (28%), Positives = 71/133 (53%)
Query: 243 LKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
L+ T KGH +T P+ + IL++S D ++ +W + ++ + P+ A G
Sbjct: 7 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGI--PQRALRGHSH 64
Query: 302 -VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL 360
V+ DG+ G DG++++W+L G +R + GH+ D+ ++ FSSD R +
Sbjct: 65 FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV----GHTKDVLSVAFSSDNRQI 120
Query: 361 LSRSFDGSLKVWD 373
+S S D ++K+W+
Sbjct: 121 VSGSRDKTIKLWN 133
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 54/182 (29%), Positives = 88/182 (48%)
Query: 320 DGSIQVWNL---KPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRK 376
D +I +W L + +G P +GHS ++ + SSDG+ LS S+DG+L++WDL
Sbjct: 37 DKTIIMWKLTRDETNYGI-PQ-RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT 94
Query: 377 MKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT---SVERESTTGGLLCFY---DREKLE 430
+ + + +VAFS D + ++G+ +++ +T G +C Y D E
Sbjct: 95 GTTTRRF---VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG--VCKYTVQDESHSE 149
Query: 431 LVSRVGISPACS---VVQCAWHPKLNQIFATAGDKSQ----GGTHILYDPRLSERGALVC 483
VS V SP S +V C W KL +++ A K + G T L +S G+L C
Sbjct: 150 WVSCVRFSPNSSNPIIVSCGWD-KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL-C 207
Query: 484 VA 485
+
Sbjct: 208 AS 209
Score = 87 (35.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQ-GMNSRLQSFRQLEPSEGHQVRNLS 203
L+GH+ VS + + G LSGS+D T+R++D G +R F GH LS
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR--RF------VGHTKDVLS 110
Query: 204 WSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
+ +SD V+GS I + L + ++ ++D + H ++C + P +
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT-----VQD----ESHSEWVSCVRFSPNSS 161
Query: 264 ETILTSSE-DGSLRIWDVNEFK 284
I+ S D +++W++ K
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCK 183
Score = 77 (32.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 267 LTSSEDGSLRIWD------VNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGD 320
L ++ S++IWD V+E K Q+ + A P + T+ AW DG+ + G D
Sbjct: 248 LCAATGPSIKIWDLEGKIIVDELK-QEVISTSSKAEPPQC--TSLAWSADGQTLFAGYTD 304
Query: 321 GSIQVWNLKPG 331
++VW + G
Sbjct: 305 NLVRVWQVTIG 315
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 137 (53.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 38/133 (28%), Positives = 71/133 (53%)
Query: 243 LKNT-KGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA 301
L+ T KGH +T P+ + IL++S D ++ +W + ++ + P+ A G
Sbjct: 7 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGI--PQRALRGHSH 64
Query: 302 -VTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRIL 360
V+ DG+ G DG++++W+L G +R + GH+ D+ ++ FSSD R +
Sbjct: 65 FVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV----GHTKDVLSVAFSSDNRQI 120
Query: 361 LSRSFDGSLKVWD 373
+S S D ++K+W+
Sbjct: 121 VSGSRDKTIKLWN 133
Score = 126 (49.4 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 54/182 (29%), Positives = 88/182 (48%)
Query: 320 DGSIQVWNL---KPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRK 376
D +I +W L + +G P +GHS ++ + SSDG+ LS S+DG+L++WDL
Sbjct: 37 DKTIIMWKLTRDETNYGI-PQ-RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT 94
Query: 377 MKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGT---SVERESTTGGLLCFY---DREKLE 430
+ + + +VAFS D + ++G+ +++ +T G +C Y D E
Sbjct: 95 GTTTRRF---VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG--VCKYTVQDESHSE 149
Query: 431 LVSRVGISPACS---VVQCAWHPKLNQIFATAGDKSQ----GGTHILYDPRLSERGALVC 483
VS V SP S +V C W KL +++ A K + G T L +S G+L C
Sbjct: 150 WVSCVRFSPNSSNPIIVSCGWD-KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL-C 207
Query: 484 VA 485
+
Sbjct: 208 AS 209
Score = 87 (35.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 145 LKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQ-GMNSRLQSFRQLEPSEGHQVRNLS 203
L+GH+ VS + + G LSGS+D T+R++D G +R F GH LS
Sbjct: 59 LRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR--RF------VGHTKDVLS 110
Query: 204 WSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTK 263
+ +SD V+GS I + L + ++ ++D + H ++C + P +
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTLGVCKYT-----VQD----ESHSEWVSCVRFSPNSS 161
Query: 264 ETILTSSE-DGSLRIWDVNEFK 284
I+ S D +++W++ K
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCK 183
Score = 77 (32.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 267 LTSSEDGSLRIWD------VNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGD 320
L ++ S++IWD V+E K Q+ + A P + T+ AW DG+ + G D
Sbjct: 248 LCAATGPSIKIWDLEGKIIVDELK-QEVISTSSKAEPPQC--TSLAWSADGQTLFAGYTD 304
Query: 321 GSIQVWNLKPG 331
++VW + G
Sbjct: 305 NLVRVWQVTIG 315
WARNING: HSPs involving 435 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.133 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 616 593 0.00084 120 3 11 23 0.44 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 685
No. of states in DFA: 624 (66 KB)
Total size of DFA: 348 KB (2173 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 55.63u 0.16s 55.79t Elapsed: 00:00:03
Total cpu time: 55.72u 0.16s 55.88t Elapsed: 00:00:03
Start: Fri May 10 05:23:37 2013 End: Fri May 10 05:23:40 2013
WARNINGS ISSUED: 2