Citrus Sinensis ID: 048012

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610------
AQFPFTFGKQAKSQTPLEKIHNATRRSDPLTTTTAATDNEKNNLPSISSSSKEWLGTLRNPKSSDAAPIGPPPPPPRQQELKADDGDVMIGPPRPPQQQEDDADSVMIGPPRPPAESGDDDDDDVDEEEGEENRHQIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDKSQGGTHILYDPRLSERGALVCVARAPRKKSVDDFEVAPVIHNPHALPLFRDQPSRKRQREKLLKDPIKSHKPEVPVTGPGHGGRVGASKGSLLTQYLLKQGGMIKETWMEEDPREAILKYADVAAKDPKYIAPAYAQTQPAPVFQESDSEDEEK
cccccccccccccccccHHHHHcccccccEEEEEEcccccEEEcccccccEEEcccccccccccccccEECccccccccCEEcccccCECccccccccccccEEEEEEcccccccCEcccccccccccccccccccccccccEEcccccccEEEEEEcccccEEEEccccccEEEEEcccccccccccccccccccccEEEEEEcccccEEEEECccccEEEEEccccCEEEEECccCEECcccccccccccEEEEEEccccccEEEEEcccccEEEEEccccCEEEEEECccccccccccEEEEEEcccccEEEEECccccEEEEEccccccccccccccccccccEEEEEEcccccEEEEECccccEEEEEcccccccEEEECcccccccEEEEEEcccccEEEEEcccccccccccEEEEEccccccEEEEEECcccccEEEEEECccccEEEEcccccccccEEEEEcccccccccEEEEECccccEEEECcccccEEEcccccccccccccHHHHHcccccccccccccccccccccccccEEEccccccccEEEccccccccccccccHHHHHHHHHHHHccccccccHHHHcccccccccccccccccc
**FPFTFGKQAKSQTP*EKIHNATRRSDPLTTTTAATDNEKNNLPSISSSSKEWLGTLRNPK***AA**G************ADDGDVMIGPPRPPQQQEDDADSVMIGPPRPPAESGDDDDDDVDEEEGEENRHQIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDKSQGGTHILYDPRLSERGALVCVARAPRKKSVDDFEVAPVIHNPHAL********************************************SLLTQYLLKQGGMIKETWMEEDPREAILKYADVAAKDPKYIAPAYAQTQPAP************
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AQFPFTFGKQAKSQTPLEKIHNATRRSDPLTTTTAATDNEKNNLPSISSSSKEWLGTLRNPKSSDAAPIGPPPPPPRQQELKADDGDVMIGPPRPPQQQEDDADSVMIGPPRPPAESGDDDDDDVDEEEGEENRHQIPMSNEIVLKGHTKIVSALAVDHSGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPSEGHQVRNLSWSPTSDRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDREKLELVSRVGISPACSVVQCAWHPKLNQIFATAGDKSQGGTHILYDPRLSERGALVCVARAPRKKSVDDFEVAPVIHNPHALPLFRDQPSRKRQREKLLKDPIKSHKPEVPVTGPGHGGRVGASKGSLLTQYLLKQGGMIKETWMEEDPREAILKYADVAAKDPKYIAPAYAQTQPAPVFQESDSEDEEK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
WD repeat-containing protein 70 probableQ0VA16

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2YMU, chain A
Confidence level:very confident
Coverage over the Query: 141-230,244-497
View the alignment between query and template
View the model in PyMOL
Template: 1NR0, chain A
Confidence level:very confident
Coverage over the Query: 141-227,242-513
View the alignment between query and template
View the model in PyMOL
Template: 2OAJ, chain A
Confidence level:confident
Coverage over the Query: 142-501
View the alignment between query and template
View the model in PyMOL